##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM226609v1 #!genome-build-accession NCBI_Assembly:GCF_002266095.1 #!annotation-date 04/15/2025 21:50:09 #!annotation-source NCBI RefSeq GCF_002266095.1-RS_2025_04_15 ##sequence-region NZ_NPLZ01000001.1 1 684339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000001.1 RefSeq region 1 684339 . + . ID=NZ_NPLZ01000001.1:1..684339;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000001.1 RefSeq gene 1 944 . + . ID=gene-CCO53_RS00005;Name=CCO53_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00005;old_locus_tag=CCO53_00005;partial=true;start_range=.,1 NZ_NPLZ01000001.1 Protein Homology CDS 1 944 . + 2 ID=cds-WP_094887496.1;Parent=gene-CCO53_RS00005;Dbxref=GenBank:WP_094887496.1;Name=WP_094887496.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462261.1;locus_tag=CCO53_RS00005;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_094887496.1;start_range=.,1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 964 1695 . + . ID=gene-CCO53_RS00010;Name=CCO53_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00010;old_locus_tag=CCO53_00010 NZ_NPLZ01000001.1 Protein Homology CDS 964 1695 . + 0 ID=cds-WP_000602026.1;Parent=gene-CCO53_RS00010;Dbxref=GenBank:WP_000602026.1;Name=WP_000602026.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=CCO53_RS00010;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_000602026.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 1729 2799 . - . ID=gene-CCO53_RS00015;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=CCO53_RS00015;old_locus_tag=CCO53_00015 NZ_NPLZ01000001.1 Protein Homology CDS 1729 2799 . - 0 ID=cds-WP_000497705.1;Parent=gene-CCO53_RS00015;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=CCO53_RS00015;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 2892 4259 . - . ID=gene-CCO53_RS00020;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=CCO53_RS00020;old_locus_tag=CCO53_00020 NZ_NPLZ01000001.1 Protein Homology CDS 2892 4259 . - 0 ID=cds-WP_058331958.1;Parent=gene-CCO53_RS00020;Dbxref=GenBank:WP_058331958.1;Name=WP_058331958.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=CCO53_RS00020;product=serine endoprotease DegQ;protein_id=WP_058331958.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 4416 4814 . - . ID=gene-CCO53_RS00025;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=CCO53_RS00025;old_locus_tag=CCO53_00025 NZ_NPLZ01000001.1 Protein Homology CDS 4416 4814 . - 0 ID=cds-WP_001519074.1;Parent=gene-CCO53_RS00025;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=CCO53_RS00025;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 5007 6131 . + . ID=gene-CCO53_RS00030;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=CCO53_RS00030;old_locus_tag=CCO53_00030 NZ_NPLZ01000001.1 Protein Homology CDS 5007 6131 . + 0 ID=cds-WP_001191220.1;Parent=gene-CCO53_RS00030;Dbxref=GenBank:WP_001191220.1;Name=WP_001191220.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=CCO53_RS00030;product=cell division protein ZapE;protein_id=WP_001191220.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 6434 6862 . + . ID=gene-CCO53_RS00035;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CCO53_RS00035;old_locus_tag=CCO53_00035 NZ_NPLZ01000001.1 Protein Homology CDS 6434 6862 . + 0 ID=cds-WP_000847559.1;Parent=gene-CCO53_RS00035;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=CCO53_RS00035;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 6878 7270 . + . ID=gene-CCO53_RS00040;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CCO53_RS00040;old_locus_tag=CCO53_00040 NZ_NPLZ01000001.1 Protein Homology CDS 6878 7270 . + 0 ID=cds-WP_000829815.1;Parent=gene-CCO53_RS00040;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=CCO53_RS00040;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 7470 8222 . + . ID=gene-CCO53_RS00045;Name=CCO53_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00045;old_locus_tag=CCO53_00045 NZ_NPLZ01000001.1 Protein Homology CDS 7470 8222 . + 0 ID=cds-WP_000950539.1;Parent=gene-CCO53_RS00045;Dbxref=GenBank:WP_000950539.1;Name=WP_000950539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=CCO53_RS00045;product=DUF695 domain-containing protein;protein_id=WP_000950539.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 8485 9123 . + . ID=gene-CCO53_RS00050;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=CCO53_RS00050;old_locus_tag=CCO53_00050 NZ_NPLZ01000001.1 Protein Homology CDS 8485 9123 . + 0 ID=cds-WP_000257298.1;Parent=gene-CCO53_RS00050;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=CCO53_RS00050;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 9129 9629 . + . ID=gene-CCO53_RS00055;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=CCO53_RS00055;old_locus_tag=CCO53_00055 NZ_NPLZ01000001.1 Protein Homology CDS 9129 9629 . + 0 ID=cds-WP_000366112.1;Parent=gene-CCO53_RS00055;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=CCO53_RS00055;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 9738 10529 . + . ID=gene-CCO53_RS00060;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=CCO53_RS00060;old_locus_tag=CCO53_00060 NZ_NPLZ01000001.1 Protein Homology CDS 9738 10529 . + 0 ID=cds-WP_000382926.1;Parent=gene-CCO53_RS00060;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=CCO53_RS00060;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 10664 11557 . + . ID=gene-CCO53_RS00065;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=CCO53_RS00065;old_locus_tag=CCO53_00065 NZ_NPLZ01000001.1 Protein Homology CDS 10664 11557 . + 0 ID=cds-WP_001029665.1;Parent=gene-CCO53_RS00065;Dbxref=GenBank:WP_001029665.1;Name=WP_001029665.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=CCO53_RS00065;product=N-acetylneuraminate lyase;protein_id=WP_001029665.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 11673 13163 . + . ID=gene-CCO53_RS00070;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=CCO53_RS00070;old_locus_tag=CCO53_00070 NZ_NPLZ01000001.1 Protein Homology CDS 11673 13163 . + 0 ID=cds-WP_000108071.1;Parent=gene-CCO53_RS00070;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=CCO53_RS00070;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 13210 13899 . + . ID=gene-CCO53_RS00075;Name=CCO53_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00075;old_locus_tag=CCO53_00075 NZ_NPLZ01000001.1 Protein Homology CDS 13210 13899 . + 0 ID=cds-WP_000054439.1;Parent=gene-CCO53_RS00075;Dbxref=GenBank:WP_000054439.1;Name=WP_000054439.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=CCO53_RS00075;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054439.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 13896 14771 . + . ID=gene-CCO53_RS00080;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=CCO53_RS00080;old_locus_tag=CCO53_00080 NZ_NPLZ01000001.1 Protein Homology CDS 13896 14771 . + 0 ID=cds-WP_000208982.1;Parent=gene-CCO53_RS00080;Dbxref=GenBank:WP_000208982.1;Name=WP_000208982.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=CCO53_RS00080;product=N-acetylmannosamine kinase;protein_id=WP_000208982.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 14768 15235 . + . ID=gene-CCO53_RS00085;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=CCO53_RS00085;old_locus_tag=CCO53_00085 NZ_NPLZ01000001.1 Protein Homology CDS 14768 15235 . + 0 ID=cds-WP_058331954.1;Parent=gene-CCO53_RS00085;Dbxref=GenBank:WP_058331954.1;Name=WP_058331954.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=CCO53_RS00085;product=N-acetylneuraminate anomerase;protein_id=WP_058331954.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 15318 16598 . - . ID=gene-CCO53_RS00090;Name=CCO53_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00090;old_locus_tag=CCO53_00090 NZ_NPLZ01000001.1 Protein Homology CDS 15318 16598 . - 0 ID=cds-WP_058331953.1;Parent=gene-CCO53_RS00090;Dbxref=GenBank:WP_058331953.1;Name=WP_058331953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=CCO53_RS00090;product=cytosine deaminase;protein_id=WP_058331953.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 16585 17838 . - . ID=gene-CCO53_RS00095;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=CCO53_RS00095;old_locus_tag=CCO53_00095 NZ_NPLZ01000001.1 Protein Homology CDS 16585 17838 . - 0 ID=cds-WP_000076263.1;Parent=gene-CCO53_RS00095;Dbxref=GenBank:WP_000076263.1;Name=WP_000076263.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=CCO53_RS00095;product=cytosine permease;protein_id=WP_000076263.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 17954 19057 . - . ID=gene-CCO53_RS00100;Name=CCO53_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00100;old_locus_tag=CCO53_00100 NZ_NPLZ01000001.1 Protein Homology CDS 17954 19057 . - 0 ID=cds-WP_080210077.1;Parent=gene-CCO53_RS00100;Dbxref=GenBank:WP_080210077.1;Name=WP_080210077.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=CCO53_RS00100;product=PDDEXK nuclease domain-containing protein;protein_id=WP_080210077.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 19211 19615 . - . ID=gene-CCO53_RS00105;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CCO53_RS00105;old_locus_tag=CCO53_00105 NZ_NPLZ01000001.1 Protein Homology CDS 19211 19615 . - 0 ID=cds-WP_024148934.1;Parent=gene-CCO53_RS00105;Dbxref=GenBank:WP_024148934.1;Name=WP_024148934.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1;locus_tag=CCO53_RS00105;product=IS200/IS605 family transposase;protein_id=WP_024148934.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 19674 20879 . + . ID=gene-CCO53_RS00110;Name=CCO53_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00110;old_locus_tag=CCO53_00110 NZ_NPLZ01000001.1 Protein Homology CDS 19674 20879 . + 0 ID=cds-WP_001747683.1;Parent=gene-CCO53_RS00110;Dbxref=GenBank:WP_001747683.1;Name=WP_001747683.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669153.1;locus_tag=CCO53_RS00110;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_001747683.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 21083 22501 . - . ID=gene-CCO53_RS00115;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=CCO53_RS00115;old_locus_tag=CCO53_00115 NZ_NPLZ01000001.1 Protein Homology CDS 21083 22501 . - 0 ID=cds-WP_000081642.1;Parent=gene-CCO53_RS00115;Dbxref=GenBank:WP_000081642.1;Name=WP_000081642.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=CCO53_RS00115;product=glutamate synthase subunit GltD;protein_id=WP_000081642.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 22511 26971 . - . ID=gene-CCO53_RS00120;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CCO53_RS00120;old_locus_tag=CCO53_00120 NZ_NPLZ01000001.1 Protein Homology CDS 22511 26971 . - 0 ID=cds-WP_001748595.1;Parent=gene-CCO53_RS00120;Dbxref=GenBank:WP_001748595.1;Name=WP_001748595.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=CCO53_RS00120;product=glutamate synthase large subunit;protein_id=WP_001748595.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 27643 28572 . + . ID=gene-CCO53_RS00130;Name=CCO53_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00130;old_locus_tag=CCO53_00130 NZ_NPLZ01000001.1 Protein Homology CDS 27643 28572 . + 0 ID=cds-WP_094887497.1;Parent=gene-CCO53_RS00130;Dbxref=GenBank:WP_094887497.1;Name=WP_094887497.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=CCO53_RS00130;product=TIGR01212 family radical SAM protein;protein_id=WP_094887497.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 28666 31002 . + . ID=gene-CCO53_RS00135;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=CCO53_RS00135;old_locus_tag=CCO53_00135 NZ_NPLZ01000001.1 Protein Homology CDS 28666 31002 . + 0 ID=cds-WP_000809820.1;Parent=gene-CCO53_RS00135;Dbxref=GenBank:WP_000809820.1;Name=WP_000809820.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=CCO53_RS00135;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809820.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 31229 31882 . + . ID=gene-CCO53_RS00140;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=CCO53_RS00140;old_locus_tag=CCO53_00140 NZ_NPLZ01000001.1 Protein Homology CDS 31229 31882 . + 0 ID=cds-WP_000719822.1;Parent=gene-CCO53_RS00140;Dbxref=GenBank:WP_000719822.1;Name=WP_000719822.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=CCO53_RS00140;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719822.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 31879 32607 . + . ID=gene-CCO53_RS00145;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=CCO53_RS00145;old_locus_tag=CCO53_00145 NZ_NPLZ01000001.1 Protein Homology CDS 31879 32607 . + 0 ID=cds-WP_000044647.1;Parent=gene-CCO53_RS00145;Dbxref=GenBank:WP_000044647.1;Name=WP_000044647.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=CCO53_RS00145;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044647.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 32682 33314 . - . ID=gene-CCO53_RS00150;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=CCO53_RS00150;old_locus_tag=CCO53_00150 NZ_NPLZ01000001.1 Protein Homology CDS 32682 33314 . - 0 ID=cds-WP_000602196.1;Parent=gene-CCO53_RS00150;Dbxref=GenBank:WP_000602196.1;Name=WP_000602196.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=CCO53_RS00150;product=PhoP regulatory network protein YrbL;protein_id=WP_000602196.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 33564 33836 . - . ID=gene-CCO53_RS00160;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=CCO53_RS00160;old_locus_tag=CCO53_00160 NZ_NPLZ01000001.1 Protein Homology CDS 33564 33836 . - 0 ID=cds-WP_000216797.1;Parent=gene-CCO53_RS00160;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=CCO53_RS00160;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 33833 34687 . - . ID=gene-CCO53_RS00165;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CCO53_RS00165;old_locus_tag=CCO53_00165 NZ_NPLZ01000001.1 Protein Homology CDS 33833 34687 . - 0 ID=cds-WP_000243749.1;Parent=gene-CCO53_RS00165;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=CCO53_RS00165;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 34733 35224 . - . ID=gene-CCO53_RS00170;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=CCO53_RS00170;old_locus_tag=CCO53_00170 NZ_NPLZ01000001.1 Protein Homology CDS 34733 35224 . - 0 ID=cds-WP_000609332.1;Parent=gene-CCO53_RS00170;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=CCO53_RS00170;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 35342 35629 . - . ID=gene-CCO53_RS00175;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CCO53_RS00175;old_locus_tag=CCO53_00175 NZ_NPLZ01000001.1 Protein Homology CDS 35342 35629 . - 0 ID=cds-WP_001176589.1;Parent=gene-CCO53_RS00175;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=CCO53_RS00175;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 35652 37085 . - . ID=gene-CCO53_RS00180;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CCO53_RS00180;old_locus_tag=CCO53_00180 NZ_NPLZ01000001.1 Protein Homology CDS 35652 37085 . - 0 ID=cds-WP_000809020.1;Parent=gene-CCO53_RS00180;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=CCO53_RS00180;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 37133 37858 . - . ID=gene-CCO53_RS00185;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CCO53_RS00185;old_locus_tag=CCO53_00185 NZ_NPLZ01000001.1 Protein Homology CDS 37133 37858 . - 0 ID=cds-WP_000224104.1;Parent=gene-CCO53_RS00185;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=CCO53_RS00185;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 37865 38419 . - . ID=gene-CCO53_RS00190;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=CCO53_RS00190;old_locus_tag=CCO53_00190 NZ_NPLZ01000001.1 Protein Homology CDS 37865 38419 . - 0 ID=cds-WP_000669770.1;Parent=gene-CCO53_RS00190;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=CCO53_RS00190;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 38388 38963 . - . ID=gene-CCO53_RS00195;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CCO53_RS00195;old_locus_tag=CCO53_00195 NZ_NPLZ01000001.1 Protein Homology CDS 38388 38963 . - 0 ID=cds-WP_000047845.1;Parent=gene-CCO53_RS00195;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=CCO53_RS00195;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 38960 39526 . - . ID=gene-CCO53_RS00200;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=CCO53_RS00200;old_locus_tag=CCO53_00200 NZ_NPLZ01000001.1 Protein Homology CDS 38960 39526 . - 0 ID=cds-WP_000030029.1;Parent=gene-CCO53_RS00200;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=CCO53_RS00200;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 39547 40533 . - . ID=gene-CCO53_RS00205;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=CCO53_RS00205;old_locus_tag=CCO53_00205 NZ_NPLZ01000001.1 Protein Homology CDS 39547 40533 . - 0 ID=cds-WP_000018619.1;Parent=gene-CCO53_RS00205;Dbxref=GenBank:WP_000018619.1;Name=WP_000018619.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=CCO53_RS00205;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018619.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 40547 41524 . - . ID=gene-CCO53_RS00210;Name=CCO53_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00210;old_locus_tag=CCO53_00210 NZ_NPLZ01000001.1 Protein Homology CDS 40547 41524 . - 0 ID=cds-WP_000922736.1;Parent=gene-CCO53_RS00210;Dbxref=GenBank:WP_000922736.1;Name=WP_000922736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=CCO53_RS00210;product=calcium/sodium antiporter;protein_id=WP_000922736.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 41737 42549 . + . ID=gene-CCO53_RS00215;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=CCO53_RS00215;old_locus_tag=CCO53_00215 NZ_NPLZ01000001.1 Protein Homology CDS 41737 42549 . + 0 ID=cds-WP_000531566.1;Parent=gene-CCO53_RS00215;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=CCO53_RS00215;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 42557 43339 . + . ID=gene-CCO53_RS00220;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=CCO53_RS00220;old_locus_tag=CCO53_00220 NZ_NPLZ01000001.1 Protein Homology CDS 42557 43339 . + 0 ID=cds-WP_000925786.1;Parent=gene-CCO53_RS00220;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=CCO53_RS00220;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 43344 43895 . + . ID=gene-CCO53_RS00225;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=CCO53_RS00225;old_locus_tag=CCO53_00225 NZ_NPLZ01000001.1 Protein Homology CDS 43344 43895 . + 0 ID=cds-WP_001193591.1;Parent=gene-CCO53_RS00225;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=CCO53_RS00225;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 43914 44549 . + . ID=gene-CCO53_RS00230;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=CCO53_RS00230;old_locus_tag=CCO53_00230 NZ_NPLZ01000001.1 Protein Homology CDS 43914 44549 . + 0 ID=cds-WP_000476475.1;Parent=gene-CCO53_RS00230;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=CCO53_RS00230;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 44549 44845 . + . ID=gene-CCO53_RS00235;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=CCO53_RS00235;old_locus_tag=CCO53_00235 NZ_NPLZ01000001.1 Protein Homology CDS 44549 44845 . + 0 ID=cds-WP_000188844.1;Parent=gene-CCO53_RS00235;Dbxref=GenBank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=CCO53_RS00235;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 45033 45287 . + . ID=gene-CCO53_RS00240;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=CCO53_RS00240;old_locus_tag=CCO53_00240 NZ_NPLZ01000001.1 Protein Homology CDS 45033 45287 . + 0 ID=cds-WP_001518349.1;Parent=gene-CCO53_RS00240;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=CCO53_RS00240;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 45341 46600 . + . ID=gene-CCO53_RS00245;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CCO53_RS00245;old_locus_tag=CCO53_00245 NZ_NPLZ01000001.1 Protein Homology CDS 45341 46600 . + 0 ID=cds-WP_000357288.1;Parent=gene-CCO53_RS00245;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=CCO53_RS00245;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 46658 46945 . - . ID=gene-CCO53_RS00250;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=CCO53_RS00250;old_locus_tag=CCO53_00250 NZ_NPLZ01000001.1 Protein Homology CDS 46658 46945 . - 0 ID=cds-WP_000444168.1;Parent=gene-CCO53_RS00250;Dbxref=GenBank:WP_000444168.1;Name=WP_000444168.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=CCO53_RS00250;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444168.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 47178 48149 . - . ID=gene-CCO53_RS00255;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=CCO53_RS00255;old_locus_tag=CCO53_00255 NZ_NPLZ01000001.1 Protein Homology CDS 47178 48149 . - 0 ID=cds-WP_001047354.1;Parent=gene-CCO53_RS00255;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=CCO53_RS00255;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 48407 48718 . + . ID=gene-CCO53_RS00260;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CCO53_RS00260;old_locus_tag=CCO53_00260 NZ_NPLZ01000001.1 Protein Homology CDS 48407 48718 . + 0 ID=cds-WP_000271396.1;Parent=gene-CCO53_RS00260;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=CCO53_RS00260;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 48738 48995 . + . ID=gene-CCO53_RS00265;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CCO53_RS00265;old_locus_tag=CCO53_00265 NZ_NPLZ01000001.1 Protein Homology CDS 48738 48995 . + 0 ID=cds-WP_000940593.1;Parent=gene-CCO53_RS00265;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=CCO53_RS00265;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 49125 50090 . + . ID=gene-CCO53_RS00270;Name=CCO53_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00270;old_locus_tag=CCO53_00270 NZ_NPLZ01000001.1 Protein Homology CDS 49125 50090 . + 0 ID=cds-WP_000813052.1;Parent=gene-CCO53_RS00270;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=CCO53_RS00270;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 50106 51278 . + . ID=gene-CCO53_RS00275;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=CCO53_RS00275;old_locus_tag=CCO53_00275 NZ_NPLZ01000001.1 Protein Homology CDS 50106 51278 . + 0 ID=cds-WP_094887498.1;Parent=gene-CCO53_RS00275;Dbxref=GenBank:WP_094887498.1;Name=WP_094887498.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=CCO53_RS00275;product=Obg family GTPase CgtA;protein_id=WP_094887498.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 51409 52842 . - . ID=gene-CCO53_RS00280;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CCO53_RS00280;old_locus_tag=CCO53_00280 NZ_NPLZ01000001.1 Protein Homology CDS 51409 52842 . - 0 ID=cds-WP_061372339.1;Parent=gene-CCO53_RS00280;Dbxref=GenBank:WP_061372339.1;Name=WP_061372339.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=CCO53_RS00280;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_061372339.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 53090 53566 . + . ID=gene-CCO53_RS00285;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CCO53_RS00285;old_locus_tag=CCO53_00285 NZ_NPLZ01000001.1 Protein Homology CDS 53090 53566 . + 0 ID=cds-WP_001148008.1;Parent=gene-CCO53_RS00285;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=CCO53_RS00285;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 53722 54015 . - . ID=gene-CCO53_RS00290;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CCO53_RS00290;old_locus_tag=CCO53_00290 NZ_NPLZ01000001.1 Protein Homology CDS 53722 54015 . - 0 ID=cds-WP_001592995.1;Parent=gene-CCO53_RS00290;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=CCO53_RS00290;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 54142 54768 . + . ID=gene-CCO53_RS00295;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=CCO53_RS00295;old_locus_tag=CCO53_00295 NZ_NPLZ01000001.1 Protein Homology CDS 54142 54768 . + 0 ID=cds-WP_000145974.1;Parent=gene-CCO53_RS00295;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=CCO53_RS00295;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 54872 56806 . + . ID=gene-CCO53_RS00305;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=CCO53_RS00305;old_locus_tag=CCO53_00305 NZ_NPLZ01000001.1 Protein Homology CDS 54872 56806 . + 0 ID=cds-WP_001107481.1;Parent=gene-CCO53_RS00305;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=CCO53_RS00305;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 56910 57758 . + . ID=gene-CCO53_RS00310;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CCO53_RS00310;old_locus_tag=CCO53_00310 NZ_NPLZ01000001.1 Protein Homology CDS 56910 57758 . + 0 ID=cds-WP_000764711.1;Parent=gene-CCO53_RS00310;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=CCO53_RS00310;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 57751 59088 . + . ID=gene-CCO53_RS00315;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CCO53_RS00315;old_locus_tag=CCO53_00315 NZ_NPLZ01000001.1 Protein Homology CDS 57751 59088 . + 0 ID=cds-WP_000071169.1;Parent=gene-CCO53_RS00315;Dbxref=GenBank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=CCO53_RS00315;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 59311 59643 . + . ID=gene-CCO53_RS00320;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CCO53_RS00320;old_locus_tag=CCO53_00320 NZ_NPLZ01000001.1 Protein Homology CDS 59311 59643 . + 0 ID=cds-WP_000272680.1;Parent=gene-CCO53_RS00320;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=CCO53_RS00320;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 59657 59743 . + . ID=gene-CCO53_RS00325;Name=CCO53_RS00325;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS00325;old_locus_tag=CCO53_00325 NZ_NPLZ01000001.1 tRNAscan-SE tRNA 59657 59743 . + . ID=rna-CCO53_RS00325;Parent=gene-CCO53_RS00325;anticodon=(pos:59691..59693);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS00325;product=tRNA-Leu NZ_NPLZ01000001.1 tRNAscan-SE exon 59657 59743 . + . ID=exon-CCO53_RS00325-1;Parent=rna-CCO53_RS00325;anticodon=(pos:59691..59693);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS00325;product=tRNA-Leu NZ_NPLZ01000001.1 RefSeq gene 59946 61289 . - . ID=gene-CCO53_RS00335;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=CCO53_RS00335;old_locus_tag=CCO53_00335 NZ_NPLZ01000001.1 Protein Homology CDS 59946 61289 . - 0 ID=cds-WP_000207646.1;Parent=gene-CCO53_RS00335;Dbxref=GenBank:WP_000207646.1;Name=WP_000207646.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=CCO53_RS00335;product=argininosuccinate synthase;protein_id=WP_000207646.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 61633 61709 . + . ID=gene-CCO53_RS00340;Name=CCO53_RS00340;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS00340;old_locus_tag=CCO53_00340 NZ_NPLZ01000001.1 tRNAscan-SE tRNA 61633 61709 . + . ID=rna-CCO53_RS00340;Parent=gene-CCO53_RS00340;anticodon=(pos:61667..61669);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS00340;product=tRNA-Met NZ_NPLZ01000001.1 tRNAscan-SE exon 61633 61709 . + . ID=exon-CCO53_RS00340-1;Parent=rna-CCO53_RS00340;anticodon=(pos:61667..61669);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS00340;product=tRNA-Met NZ_NPLZ01000001.1 RefSeq gene 61917 62369 . + . ID=gene-CCO53_RS00345;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CCO53_RS00345;old_locus_tag=CCO53_00345 NZ_NPLZ01000001.1 Protein Homology CDS 61917 62369 . + 0 ID=cds-WP_000105461.1;Parent=gene-CCO53_RS00345;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=CCO53_RS00345;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 62397 63899 . + . ID=gene-CCO53_RS00350;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CCO53_RS00350;old_locus_tag=CCO53_00350 NZ_NPLZ01000001.1 Protein Homology CDS 62397 63899 . + 0 ID=cds-WP_001031038.1;Parent=gene-CCO53_RS00350;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=CCO53_RS00350;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 63924 66602 . + . ID=gene-CCO53_RS00355;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CCO53_RS00355;old_locus_tag=CCO53_00355 NZ_NPLZ01000001.1 Protein Homology CDS 63924 66602 . + 0 ID=cds-WP_000133064.1;Parent=gene-CCO53_RS00355;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=CCO53_RS00355;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 66823 67224 . + . ID=gene-CCO53_RS00360;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CCO53_RS00360;old_locus_tag=CCO53_00360 NZ_NPLZ01000001.1 Protein Homology CDS 66823 67224 . + 0 ID=cds-WP_001040208.1;Parent=gene-CCO53_RS00360;Dbxref=GenBank:WP_001040208.1;Name=WP_001040208.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=CCO53_RS00360;product=30S ribosome-binding factor RbfA;protein_id=WP_001040208.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 67224 68168 . + . ID=gene-CCO53_RS00365;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CCO53_RS00365;old_locus_tag=CCO53_00365 NZ_NPLZ01000001.1 Protein Homology CDS 67224 68168 . + 0 ID=cds-WP_000089678.1;Parent=gene-CCO53_RS00365;Dbxref=GenBank:WP_000089678.1;Name=WP_000089678.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=CCO53_RS00365;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089678.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 68319 68588 . + . ID=gene-CCO53_RS00370;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CCO53_RS00370;old_locus_tag=CCO53_00370 NZ_NPLZ01000001.1 Protein Homology CDS 68319 68588 . + 0 ID=cds-WP_000059465.1;Parent=gene-CCO53_RS00370;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=CCO53_RS00370;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 68830 70965 . + . ID=gene-CCO53_RS00375;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CCO53_RS00375;old_locus_tag=CCO53_00375 NZ_NPLZ01000001.1 Protein Homology CDS 68830 70965 . + 0 ID=cds-WP_001670767.1;Parent=gene-CCO53_RS00375;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=CCO53_RS00375;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 71075 71959 . + . ID=gene-CCO53_RS00380;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=CCO53_RS00380;old_locus_tag=CCO53_00380 NZ_NPLZ01000001.1 Protein Homology CDS 71075 71959 . + 0 ID=cds-WP_000802069.1;Parent=gene-CCO53_RS00380;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=CCO53_RS00380;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 72065 72145 . + . ID=gene-CCO53_RS23570;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=CCO53_RS23570 NZ_NPLZ01000001.1 Protein Homology CDS 72065 72145 . + 0 ID=cds-WP_010723222.1;Parent=gene-CCO53_RS23570;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=CCO53_RS23570;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 72138 74027 . + . ID=gene-CCO53_RS00385;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=CCO53_RS00385;old_locus_tag=CCO53_00385 NZ_NPLZ01000001.1 Protein Homology CDS 72138 74027 . + 0 ID=cds-WP_000807248.1;Parent=gene-CCO53_RS00385;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=CCO53_RS00385;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 74181 75425 . + . ID=gene-CCO53_RS00390;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=CCO53_RS00390;old_locus_tag=CCO53_00390 NZ_NPLZ01000001.1 Protein Homology CDS 74181 75425 . + 0 ID=cds-WP_000224387.1;Parent=gene-CCO53_RS00390;Dbxref=GenBank:WP_000224387.1;Name=WP_000224387.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=CCO53_RS00390;product=tryptophan permease;protein_id=WP_000224387.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 75516 76523 . - . ID=gene-CCO53_RS00395;Name=CCO53_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00395;old_locus_tag=CCO53_00395 NZ_NPLZ01000001.1 Protein Homology CDS 75516 76523 . - 0 ID=cds-WP_094887499.1;Parent=gene-CCO53_RS00395;Dbxref=GenBank:WP_094887499.1;Name=WP_094887499.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=CCO53_RS00395;product=luciferase-like monooxygenase;protein_id=WP_094887499.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 76701 77579 . - . ID=gene-CCO53_RS00400;Name=CCO53_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00400;old_locus_tag=CCO53_00400 NZ_NPLZ01000001.1 Protein Homology CDS 76701 77579 . - 0 ID=cds-WP_000877715.1;Parent=gene-CCO53_RS00400;Dbxref=GenBank:WP_000877715.1;Name=WP_000877715.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=CCO53_RS00400;product=U32 family peptidase;protein_id=WP_000877715.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 77588 78583 . - . ID=gene-CCO53_RS00405;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=CCO53_RS00405;old_locus_tag=CCO53_00405 NZ_NPLZ01000001.1 Protein Homology CDS 77588 78583 . - 0 ID=cds-WP_000421309.1;Parent=gene-CCO53_RS00405;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=CCO53_RS00405;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 78800 79324 . + . ID=gene-CCO53_RS00410;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=CCO53_RS00410;old_locus_tag=CCO53_00410 NZ_NPLZ01000001.1 Protein Homology CDS 78800 79324 . + 0 ID=cds-WP_000884721.1;Parent=gene-CCO53_RS00410;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=CCO53_RS00410;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 79318 79821 . + . ID=gene-CCO53_RS00415;Name=CCO53_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00415;old_locus_tag=CCO53_00415 NZ_NPLZ01000001.1 Protein Homology CDS 79318 79821 . + 0 ID=cds-WP_000908562.1;Parent=gene-CCO53_RS00415;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=CCO53_RS00415;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 79808 80125 . - . ID=gene-CCO53_RS00420;Name=CCO53_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00420;old_locus_tag=CCO53_00420 NZ_NPLZ01000001.1 Protein Homology CDS 79808 80125 . - 0 ID=cds-WP_000928379.1;Parent=gene-CCO53_RS00420;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=CCO53_RS00420;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 80163 80606 . + . ID=gene-CCO53_RS00425;Name=CCO53_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00425;old_locus_tag=CCO53_00425 NZ_NPLZ01000001.1 Protein Homology CDS 80163 80606 . + 0 ID=cds-WP_000380404.1;Parent=gene-CCO53_RS00425;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=CCO53_RS00425;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 80586 81104 . - . ID=gene-CCO53_RS00430;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=CCO53_RS00430;old_locus_tag=CCO53_00430 NZ_NPLZ01000001.1 Protein Homology CDS 80586 81104 . - 0 ID=cds-WP_000037599.1;Parent=gene-CCO53_RS00430;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=CCO53_RS00430;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 81235 81870 . + . ID=gene-CCO53_RS00435;Name=CCO53_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00435;old_locus_tag=CCO53_00435 NZ_NPLZ01000001.1 Protein Homology CDS 81235 81870 . + 0 ID=cds-WP_080160272.1;Parent=gene-CCO53_RS00435;Dbxref=GenBank:WP_080160272.1;Name=WP_080160272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=CCO53_RS00435;product=NAD(P)H-binding protein;protein_id=WP_080160272.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 81937 82512 . - . ID=gene-CCO53_RS00440;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=CCO53_RS00440;old_locus_tag=CCO53_00440 NZ_NPLZ01000001.1 Protein Homology CDS 81937 82512 . - 0 ID=cds-WP_000643280.1;Parent=gene-CCO53_RS00440;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=CCO53_RS00440;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 82522 83112 . - . ID=gene-CCO53_RS00445;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=CCO53_RS00445;old_locus_tag=CCO53_00445 NZ_NPLZ01000001.1 Protein Homology CDS 82522 83112 . - 0 ID=cds-WP_000893481.1;Parent=gene-CCO53_RS00445;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=CCO53_RS00445;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 83134 83529 . - . ID=gene-CCO53_RS00450;Name=CCO53_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00450;old_locus_tag=CCO53_00450 NZ_NPLZ01000001.1 Protein Homology CDS 83134 83529 . - 0 ID=cds-WP_000057285.1;Parent=gene-CCO53_RS00450;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=CCO53_RS00450;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 83487 85529 . - . ID=gene-CCO53_RS00455;Name=CCO53_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00455;old_locus_tag=CCO53_00455 NZ_NPLZ01000001.1 Protein Homology CDS 83487 85529 . - 0 ID=cds-WP_094887500.1;Parent=gene-CCO53_RS00455;Dbxref=GenBank:WP_094887500.1;Name=WP_094887500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=CCO53_RS00455;product=penicillin-binding protein activator;protein_id=WP_094887500.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 85593 86456 . + . ID=gene-CCO53_RS00460;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CCO53_RS00460;old_locus_tag=CCO53_00460 NZ_NPLZ01000001.1 Protein Homology CDS 85593 86456 . + 0 ID=cds-WP_000812295.1;Parent=gene-CCO53_RS00460;Dbxref=GenBank:WP_000812295.1;Name=WP_000812295.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=CCO53_RS00460;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812295.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 86613 87386 . - . ID=gene-CCO53_RS00465;Name=CCO53_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00465;old_locus_tag=CCO53_00465 NZ_NPLZ01000001.1 Protein Homology CDS 86613 87386 . - 0 ID=cds-WP_001083898.1;Parent=gene-CCO53_RS00465;Dbxref=GenBank:WP_001083898.1;Name=WP_001083898.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=CCO53_RS00465;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083898.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 87497 88540 . - . ID=gene-CCO53_RS00470;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CCO53_RS00470;old_locus_tag=CCO53_00470 NZ_NPLZ01000001.1 Protein Homology CDS 87497 88540 . - 0 ID=cds-WP_000844173.1;Parent=gene-CCO53_RS00470;Dbxref=GenBank:WP_000844173.1;Name=WP_000844173.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=CCO53_RS00470;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844173.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 88584 89957 . - . ID=gene-CCO53_RS00475;Name=CCO53_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00475;old_locus_tag=CCO53_00475 NZ_NPLZ01000001.1 Protein Homology CDS 88584 89957 . - 0 ID=cds-WP_000490601.1;Parent=gene-CCO53_RS00475;Dbxref=GenBank:WP_000490601.1;Name=WP_000490601.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=CCO53_RS00475;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490601.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 89961 90245 . - . ID=gene-CCO53_RS00480;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CCO53_RS00480;old_locus_tag=CCO53_00480 NZ_NPLZ01000001.1 Protein Homology CDS 89961 90245 . - 0 ID=cds-WP_000824293.1;Parent=gene-CCO53_RS00480;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=CCO53_RS00480;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 90276 90740 . - . ID=gene-CCO53_RS00485;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CCO53_RS00485;old_locus_tag=CCO53_00485 NZ_NPLZ01000001.1 Protein Homology CDS 90276 90740 . - 0 ID=cds-WP_094887501.1;Parent=gene-CCO53_RS00485;Dbxref=GenBank:WP_094887501.1;Name=WP_094887501.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=CCO53_RS00485;product=PTS galactitol transporter subunit IIA;protein_id=WP_094887501.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 90755 92026 . - . ID=gene-CCO53_RS00490;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=CCO53_RS00490;old_locus_tag=CCO53_00490 NZ_NPLZ01000001.1 Protein Homology CDS 90755 92026 . - 0 ID=cds-WP_000658735.1;Parent=gene-CCO53_RS00490;Dbxref=GenBank:WP_000658735.1;Name=WP_000658735.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=CCO53_RS00490;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000658735.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 92146 93000 . - . ID=gene-CCO53_RS00495;Name=CCO53_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00495;old_locus_tag=CCO53_00495 NZ_NPLZ01000001.1 Protein Homology CDS 92146 93000 . - 0 ID=cds-WP_000469979.1;Parent=gene-CCO53_RS00495;Dbxref=GenBank:WP_000469979.1;Name=WP_000469979.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=CCO53_RS00495;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469979.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 93258 94829 . - . ID=gene-CCO53_RS00500;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=CCO53_RS00500;old_locus_tag=CCO53_00500 NZ_NPLZ01000001.1 Protein Homology CDS 93258 94829 . - 0 ID=cds-WP_001273722.1;Parent=gene-CCO53_RS00500;Dbxref=GenBank:WP_001273722.1;Name=WP_001273722.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=CCO53_RS00500;product=galactarate dehydratase;protein_id=WP_001273722.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 95359 96129 . + . ID=gene-CCO53_RS00505;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=CCO53_RS00505;old_locus_tag=CCO53_00505 NZ_NPLZ01000001.1 Protein Homology CDS 95359 96129 . + 0 ID=cds-WP_001057715.1;Parent=gene-CCO53_RS00505;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=CCO53_RS00505;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 96155 97045 . + . ID=gene-CCO53_RS00510;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=CCO53_RS00510;old_locus_tag=CCO53_00510 NZ_NPLZ01000001.1 Protein Homology CDS 96155 97045 . + 0 ID=cds-WP_000178106.1;Parent=gene-CCO53_RS00510;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=CCO53_RS00510;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 97143 98288 . + . ID=gene-CCO53_RS00515;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=CCO53_RS00515;old_locus_tag=CCO53_00515 NZ_NPLZ01000001.1 Protein Homology CDS 97143 98288 . + 0 ID=cds-WP_000706464.1;Parent=gene-CCO53_RS00515;Dbxref=GenBank:WP_000706464.1;Name=WP_000706464.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=CCO53_RS00515;product=glycerate 2-kinase;protein_id=WP_000706464.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 98321 98695 . + . ID=gene-CCO53_RS00520;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CCO53_RS00520;old_locus_tag=CCO53_00520 NZ_NPLZ01000001.1 cmsearch RNase_P_RNA 98321 98695 . + . ID=rna-CCO53_RS00520;Parent=gene-CCO53_RS00520;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS00520;product=RNase P RNA component class A NZ_NPLZ01000001.1 cmsearch exon 98321 98695 . + . ID=exon-CCO53_RS00520-1;Parent=rna-CCO53_RS00520;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS00520;product=RNase P RNA component class A NZ_NPLZ01000001.1 RefSeq gene 99631 100569 . + . ID=gene-CCO53_RS00530;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=CCO53_RS00530;old_locus_tag=CCO53_00530 NZ_NPLZ01000001.1 Protein Homology CDS 99631 100569 . + 0 ID=cds-WP_001094907.1;Parent=gene-CCO53_RS00530;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=CCO53_RS00530;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 100667 101656 . + . ID=gene-CCO53_RS00535;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CCO53_RS00535;old_locus_tag=CCO53_00535 NZ_NPLZ01000001.1 Protein Homology CDS 100667 101656 . + 0 ID=cds-WP_000548367.1;Parent=gene-CCO53_RS00535;Dbxref=GenBank:WP_000548367.1;Name=WP_000548367.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=CCO53_RS00535;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548367.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 101677 103008 . + . ID=gene-CCO53_RS00540;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=CCO53_RS00540;old_locus_tag=CCO53_00540 NZ_NPLZ01000001.1 Protein Homology CDS 101677 103008 . + 0 ID=cds-WP_000108129.1;Parent=gene-CCO53_RS00540;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=CCO53_RS00540;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 103075 104283 . + . ID=gene-CCO53_RS00545;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=CCO53_RS00545;old_locus_tag=CCO53_00545 NZ_NPLZ01000001.1 Protein Homology CDS 103075 104283 . + 0 ID=cds-WP_023202106.1;Parent=gene-CCO53_RS00545;Dbxref=GenBank:WP_023202106.1;Name=WP_023202106.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=CCO53_RS00545;product=propionate kinase;protein_id=WP_023202106.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 104317 106611 . + . ID=gene-CCO53_RS00550;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO53_RS00550;old_locus_tag=CCO53_00550 NZ_NPLZ01000001.1 Protein Homology CDS 104317 106611 . + 0 ID=cds-WP_000867323.1;Parent=gene-CCO53_RS00550;Dbxref=GenBank:WP_000867323.1;Name=WP_000867323.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=CCO53_RS00550;product=formate C-acetyltransferase;protein_id=WP_000867323.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 106681 107973 . + . ID=gene-CCO53_RS00555;Name=CCO53_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00555;old_locus_tag=CCO53_00555 NZ_NPLZ01000001.1 Protein Homology CDS 106681 107973 . + 0 ID=cds-WP_094887502.1;Parent=gene-CCO53_RS00555;Dbxref=GenBank:WP_094887502.1;Name=WP_094887502.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=CCO53_RS00555;product=L-serine ammonia-lyase;protein_id=WP_094887502.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 108288 109619 . + . ID=gene-CCO53_RS00560;Name=CCO53_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00560;old_locus_tag=CCO53_00560 NZ_NPLZ01000001.1 Protein Homology CDS 108288 109619 . + 0 ID=cds-WP_094887503.1;Parent=gene-CCO53_RS00560;Dbxref=GenBank:WP_094887503.1;Name=WP_094887503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=CCO53_RS00560;product=amino acid permease;protein_id=WP_094887503.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 109645 110955 . + . ID=gene-CCO53_RS00565;Name=CCO53_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00565;old_locus_tag=CCO53_00565 NZ_NPLZ01000001.1 Protein Homology CDS 109645 110955 . + 0 ID=cds-WP_000463070.1;Parent=gene-CCO53_RS00565;Dbxref=GenBank:WP_000463070.1;Name=WP_000463070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=CCO53_RS00565;product=serine dehydratase subunit alpha family protein;protein_id=WP_000463070.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 111068 111232 . - . ID=gene-CCO53_RS00570;Name=CCO53_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00570;old_locus_tag=CCO53_00570 NZ_NPLZ01000001.1 Protein Homology CDS 111068 111232 . - 0 ID=cds-WP_000039327.1;Parent=gene-CCO53_RS00570;Dbxref=GenBank:WP_000039327.1;Name=WP_000039327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=CCO53_RS00570;product=hypothetical protein;protein_id=WP_000039327.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 111256 111957 . - . ID=gene-CCO53_RS00575;Name=CCO53_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00575;old_locus_tag=CCO53_00575 NZ_NPLZ01000001.1 Protein Homology CDS 111256 111957 . - 0 ID=cds-WP_000633554.1;Parent=gene-CCO53_RS00575;Dbxref=GenBank:WP_000633554.1;Name=WP_000633554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=CCO53_RS00575;product=pirin family protein;protein_id=WP_000633554.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 112062 112958 . + . ID=gene-CCO53_RS00580;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=CCO53_RS00580;old_locus_tag=CCO53_00580 NZ_NPLZ01000001.1 Protein Homology CDS 112062 112958 . + 0 ID=cds-WP_001041026.1;Parent=gene-CCO53_RS00580;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=CCO53_RS00580;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 112997 113362 . - . ID=gene-CCO53_RS00585;Name=CCO53_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00585;old_locus_tag=CCO53_00585 NZ_NPLZ01000001.1 Protein Homology CDS 112997 113362 . - 0 ID=cds-WP_000384139.1;Parent=gene-CCO53_RS00585;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=CCO53_RS00585;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 113486 114472 . - . ID=gene-CCO53_RS00590;Name=CCO53_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00590;old_locus_tag=CCO53_00590 NZ_NPLZ01000001.1 Protein Homology CDS 113486 114472 . - 0 ID=cds-WP_000531163.1;Parent=gene-CCO53_RS00590;Dbxref=GenBank:WP_000531163.1;Name=WP_000531163.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=CCO53_RS00590;product=glutathione S-transferase family protein;protein_id=WP_000531163.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 114540 114932 . - . ID=gene-CCO53_RS00595;Name=CCO53_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00595;old_locus_tag=CCO53_00595 NZ_NPLZ01000001.1 Protein Homology CDS 114540 114932 . - 0 ID=cds-WP_001592732.1;Parent=gene-CCO53_RS00595;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=CCO53_RS00595;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 115180 115479 . - . ID=gene-CCO53_RS00600;Name=CCO53_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00600;old_locus_tag=CCO53_00600 NZ_NPLZ01000001.1 Protein Homology CDS 115180 115479 . - 0 ID=cds-WP_000095496.1;Parent=gene-CCO53_RS00600;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=CCO53_RS00600;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 115476 115874 . - . ID=gene-CCO53_RS00605;Name=CCO53_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00605;old_locus_tag=CCO53_00605 NZ_NPLZ01000001.1 Protein Homology CDS 115476 115874 . - 0 ID=cds-WP_000785626.1;Parent=gene-CCO53_RS00605;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=CCO53_RS00605;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 115877 116182 . - . ID=gene-CCO53_RS00610;Name=CCO53_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00610;old_locus_tag=CCO53_00610 NZ_NPLZ01000001.1 Protein Homology CDS 115877 116182 . - 0 ID=cds-WP_000031219.1;Parent=gene-CCO53_RS00610;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=CCO53_RS00610;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 116224 116592 . - . ID=gene-CCO53_RS00615;Name=CCO53_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00615;old_locus_tag=CCO53_00615 NZ_NPLZ01000001.1 Protein Homology CDS 116224 116592 . - 0 ID=cds-WP_000877297.1;Parent=gene-CCO53_RS00615;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=CCO53_RS00615;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 116737 117120 . - . ID=gene-CCO53_RS00620;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=CCO53_RS00620;old_locus_tag=CCO53_00620 NZ_NPLZ01000001.1 Protein Homology CDS 116737 117120 . - 0 ID=cds-WP_000917516.1;Parent=gene-CCO53_RS00620;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=CCO53_RS00620;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 117124 117786 . - . ID=gene-CCO53_RS00625;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=CCO53_RS00625;old_locus_tag=CCO53_00625 NZ_NPLZ01000001.1 Protein Homology CDS 117124 117786 . - 0 ID=cds-WP_000422141.1;Parent=gene-CCO53_RS00625;Dbxref=GenBank:WP_000422141.1;Name=WP_000422141.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=CCO53_RS00625;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422141.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 118236 119480 . - . ID=gene-CCO53_RS00635;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=CCO53_RS00635;old_locus_tag=CCO53_00635 NZ_NPLZ01000001.1 Protein Homology CDS 118236 119480 . - 0 ID=cds-WP_000235363.1;Parent=gene-CCO53_RS00635;Dbxref=GenBank:WP_000235363.1;Name=WP_000235363.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=CCO53_RS00635;product=serine/threonine transporter SstT;protein_id=WP_000235363.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 119735 120703 . - . ID=gene-CCO53_RS00640;Name=CCO53_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00640;old_locus_tag=CCO53_00640 NZ_NPLZ01000001.1 Protein Homology CDS 119735 120703 . - 0 ID=cds-WP_001098833.1;Parent=gene-CCO53_RS00640;Dbxref=GenBank:WP_001098833.1;Name=WP_001098833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=CCO53_RS00640;product=TerC family protein;protein_id=WP_001098833.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 120973 121971 . - . ID=gene-CCO53_RS00645;Name=CCO53_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00645;old_locus_tag=CCO53_00645 NZ_NPLZ01000001.1 Protein Homology CDS 120973 121971 . - 0 ID=cds-WP_080203149.1;Parent=gene-CCO53_RS00645;Dbxref=GenBank:WP_080203149.1;Name=WP_080203149.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=CCO53_RS00645;product=Gfo/Idh/MocA family protein;protein_id=WP_080203149.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 122060 122752 . - . ID=gene-CCO53_RS00650;Name=CCO53_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00650;old_locus_tag=CCO53_00650 NZ_NPLZ01000001.1 Protein Homology CDS 122060 122752 . - 0 ID=cds-WP_000951045.1;Parent=gene-CCO53_RS00650;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=CCO53_RS00650;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 122903 123400 . - . ID=gene-CCO53_RS00655;Name=CCO53_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00655;old_locus_tag=CCO53_00655 NZ_NPLZ01000001.1 Protein Homology CDS 122903 123400 . - 0 ID=cds-WP_000202966.1;Parent=gene-CCO53_RS00655;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=CCO53_RS00655;product=M48 family metallopeptidase;protein_id=WP_000202966.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 123486 124622 . + . ID=gene-CCO53_RS00660;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=CCO53_RS00660;old_locus_tag=CCO53_00660 NZ_NPLZ01000001.1 Protein Homology CDS 123486 124622 . + 0 ID=cds-WP_000019985.1;Parent=gene-CCO53_RS00660;Dbxref=GenBank:WP_000019985.1;Name=WP_000019985.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=CCO53_RS00660;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019985.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 124703 126721 . - . ID=gene-CCO53_RS00665;Name=CCO53_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00665;old_locus_tag=CCO53_00665 NZ_NPLZ01000001.1 Protein Homology CDS 124703 126721 . - 0 ID=cds-WP_094887504.1;Parent=gene-CCO53_RS00665;Dbxref=GenBank:WP_094887504.1;Name=WP_094887504.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=CCO53_RS00665;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_094887504.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 126892 128271 . - . ID=gene-CCO53_RS00670;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=CCO53_RS00670;old_locus_tag=CCO53_00670 NZ_NPLZ01000001.1 Protein Homology CDS 126892 128271 . - 0 ID=cds-WP_001520281.1;Parent=gene-CCO53_RS00670;Dbxref=GenBank:WP_001520281.1;Name=WP_001520281.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=CCO53_RS00670;product=putrescine aminotransferase;protein_id=WP_001520281.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 128701 130221 . + . ID=gene-CCO53_RS00680;Name=CCO53_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00680;old_locus_tag=CCO53_00680 NZ_NPLZ01000001.1 Protein Homology CDS 128701 130221 . + 0 ID=cds-WP_000094645.1;Parent=gene-CCO53_RS00680;Dbxref=GenBank:WP_000094645.1;Name=WP_000094645.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=CCO53_RS00680;product=methyl-accepting chemotaxis protein;protein_id=WP_000094645.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 130609 132174 . + . ID=gene-CCO53_RS00685;Name=CCO53_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00685;old_locus_tag=CCO53_00685 NZ_NPLZ01000001.1 Protein Homology CDS 130609 132174 . + 0 ID=cds-WP_000478471.1;Parent=gene-CCO53_RS00685;Dbxref=GenBank:WP_000478471.1;Name=WP_000478471.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=CCO53_RS00685;product=methyl-accepting chemotaxis protein;protein_id=WP_000478471.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 132171 132818 . - . ID=gene-CCO53_RS00690;Name=CCO53_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00690;old_locus_tag=CCO53_00690 NZ_NPLZ01000001.1 Protein Homology CDS 132171 132818 . - 0 ID=cds-WP_000983434.1;Parent=gene-CCO53_RS00690;Dbxref=GenBank:WP_000983434.1;Name=WP_000983434.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=CCO53_RS00690;product=PadR family transcriptional regulator;protein_id=WP_000983434.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 133050 133817 . + . ID=gene-CCO53_RS00695;Name=CCO53_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00695;old_locus_tag=CCO53_00695 NZ_NPLZ01000001.1 Protein Homology CDS 133050 133817 . + 0 ID=cds-WP_000213761.1;Parent=gene-CCO53_RS00695;Dbxref=GenBank:WP_000213761.1;Name=WP_000213761.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=CCO53_RS00695;product=siderophore-interacting protein;protein_id=WP_000213761.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 134141 135457 . + . ID=gene-CCO53_RS00700;Name=CCO53_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00700;old_locus_tag=CCO53_00700 NZ_NPLZ01000001.1 Protein Homology CDS 134141 135457 . + 0 ID=cds-WP_094887505.1;Parent=gene-CCO53_RS00700;Dbxref=GenBank:WP_094887505.1;Name=WP_094887505.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290294.1;locus_tag=CCO53_RS00700;product=tyrosine-type recombinase/integrase;protein_id=WP_094887505.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 135462 136076 . + . ID=gene-CCO53_RS00705;Name=CCO53_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00705;old_locus_tag=CCO53_00705 NZ_NPLZ01000001.1 Protein Homology CDS 135462 136076 . + 0 ID=cds-WP_176456330.1;Parent=gene-CCO53_RS00705;Dbxref=GenBank:WP_176456330.1;Name=WP_176456330.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854369.1;locus_tag=CCO53_RS00705;product=Fic/DOC family protein;protein_id=WP_176456330.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 136073 136219 . - . ID=gene-CCO53_RS00710;Name=CCO53_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00710;old_locus_tag=CCO53_00710 NZ_NPLZ01000001.1 Protein Homology CDS 136073 136219 . - 0 ID=cds-WP_094887506.1;Parent=gene-CCO53_RS00710;Dbxref=GenBank:WP_094887506.1;Name=WP_094887506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808013.1;locus_tag=CCO53_RS00710;product=hypothetical protein;protein_id=WP_094887506.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 136868 137911 . + . ID=gene-CCO53_RS00715;Name=CCO53_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00715;old_locus_tag=CCO53_00715 NZ_NPLZ01000001.1 GeneMarkS-2+ CDS 136868 137911 . + 0 ID=cds-WP_094887507.1;Parent=gene-CCO53_RS00715;Dbxref=GenBank:WP_094887507.1;Name=WP_094887507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS00715;product=hypothetical protein;protein_id=WP_094887507.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 138026 138262 . + . ID=gene-CCO53_RS00720;Name=CCO53_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00720;old_locus_tag=CCO53_00720 NZ_NPLZ01000001.1 Protein Homology CDS 138026 138262 . + 0 ID=cds-WP_094887508.1;Parent=gene-CCO53_RS00720;Dbxref=GenBank:WP_094887508.1;Name=WP_094887508.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812027.1;locus_tag=CCO53_RS00720;product=helix-turn-helix transcriptional regulator;protein_id=WP_094887508.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 138398 139891 . + . ID=gene-CCO53_RS00725;Name=CCO53_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00725;old_locus_tag=CCO53_00725 NZ_NPLZ01000001.1 Protein Homology CDS 138398 139891 . + 0 ID=cds-WP_094887509.1;Parent=gene-CCO53_RS00725;Dbxref=GenBank:WP_094887509.1;Name=WP_094887509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923662.1;locus_tag=CCO53_RS00725;product=YfjI family protein;protein_id=WP_094887509.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 140137 140757 . + . ID=gene-CCO53_RS00730;Name=CCO53_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00730;old_locus_tag=CCO53_00730 NZ_NPLZ01000001.1 Protein Homology CDS 140137 140757 . + 0 ID=cds-WP_094887510.1;Parent=gene-CCO53_RS00730;Dbxref=GenBank:WP_094887510.1;Name=WP_094887510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861012.1;locus_tag=CCO53_RS00730;product=inovirus Gp2 family protein;protein_id=WP_094887510.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 141325 142878 . + . ID=gene-CCO53_RS00735;Name=CCO53_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00735;old_locus_tag=CCO53_00735 NZ_NPLZ01000001.1 Protein Homology CDS 141325 142878 . + 0 ID=cds-WP_094887511.1;Parent=gene-CCO53_RS00735;Dbxref=GenBank:WP_094887511.1;Name=WP_094887511.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202810.1;locus_tag=CCO53_RS00735;product=type I restriction-modification system subunit M;protein_id=WP_094887511.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 142875 144125 . + . ID=gene-CCO53_RS00740;Name=CCO53_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00740;old_locus_tag=CCO53_00740 NZ_NPLZ01000001.1 Protein Homology CDS 142875 144125 . + 0 ID=cds-WP_094887512.1;Parent=gene-CCO53_RS00740;Dbxref=GenBank:WP_094887512.1;Name=WP_094887512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707113.1;locus_tag=CCO53_RS00740;product=restriction endonuclease subunit S;protein_id=WP_094887512.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 144252 147359 . + . ID=gene-CCO53_RS00745;Name=CCO53_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00745;old_locus_tag=CCO53_00745 NZ_NPLZ01000001.1 Protein Homology CDS 144252 147359 . + 0 ID=cds-WP_094887513.1;Parent=gene-CCO53_RS00745;Dbxref=GenBank:WP_094887513.1;Name=WP_094887513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764166.1;locus_tag=CCO53_RS00745;product=HsdR family type I site-specific deoxyribonuclease;protein_id=WP_094887513.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 147498 147785 . - . ID=gene-CCO53_RS00750;Name=CCO53_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00750;old_locus_tag=CCO53_00750 NZ_NPLZ01000001.1 GeneMarkS-2+ CDS 147498 147785 . - 0 ID=cds-WP_023242237.1;Parent=gene-CCO53_RS00750;Dbxref=GenBank:WP_023242237.1;Name=WP_023242237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS00750;product=hypothetical protein;protein_id=WP_023242237.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 147931 149049 . - . ID=gene-CCO53_RS00755;Name=CCO53_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00755;old_locus_tag=CCO53_00755 NZ_NPLZ01000001.1 GeneMarkS-2+ CDS 147931 149049 . - 0 ID=cds-WP_094887514.1;Parent=gene-CCO53_RS00755;Dbxref=GenBank:WP_094887514.1;Name=WP_094887514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS00755;product=hypothetical protein;protein_id=WP_094887514.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 149417 149710 . + . ID=gene-CCO53_RS00760;Name=CCO53_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00760;old_locus_tag=CCO53_00760 NZ_NPLZ01000001.1 GeneMarkS-2+ CDS 149417 149710 . + 0 ID=cds-WP_094887515.1;Parent=gene-CCO53_RS00760;Dbxref=GenBank:WP_094887515.1;Name=WP_094887515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS00760;product=hypothetical protein;protein_id=WP_094887515.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 150065 150778 . + . ID=gene-CCO53_RS00770;Name=CCO53_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00770;old_locus_tag=CCO53_00770 NZ_NPLZ01000001.1 Protein Homology CDS 150065 150778 . + 0 ID=cds-WP_094887516.1;Parent=gene-CCO53_RS00770;Dbxref=GenBank:WP_094887516.1;Name=WP_094887516.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083853.1;locus_tag=CCO53_RS00770;product=helix-turn-helix transcriptional regulator;protein_id=WP_094887516.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 150779 150997 . + . ID=gene-CCO53_RS00775;Name=CCO53_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00775;old_locus_tag=CCO53_00775 NZ_NPLZ01000001.1 GeneMarkS-2+ CDS 150779 150997 . + 0 ID=cds-WP_094887517.1;Parent=gene-CCO53_RS00775;Dbxref=GenBank:WP_094887517.1;Name=WP_094887517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS00775;product=hypothetical protein;protein_id=WP_094887517.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 151014 151217 . + . ID=gene-CCO53_RS00780;Name=CCO53_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00780;old_locus_tag=CCO53_00780 NZ_NPLZ01000001.1 Protein Homology CDS 151014 151217 . + 0 ID=cds-WP_023137300.1;Parent=gene-CCO53_RS00780;Dbxref=GenBank:WP_023137300.1;Name=WP_023137300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000508241.1;locus_tag=CCO53_RS00780;product=hypothetical protein;protein_id=WP_023137300.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 151282 152196 . + . ID=gene-CCO53_RS00785;Name=CCO53_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00785;old_locus_tag=CCO53_00785 NZ_NPLZ01000001.1 Protein Homology CDS 151282 152196 . + 0 ID=cds-WP_237141204.1;Parent=gene-CCO53_RS00785;Dbxref=GenBank:WP_237141204.1;Name=WP_237141204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013991368.1;locus_tag=CCO53_RS00785;product=inhibitor of vertebrate lysozyme family protein;protein_id=WP_237141204.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 152281 153102 . + . ID=gene-CCO53_RS00790;Name=CCO53_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00790;old_locus_tag=CCO53_00790 NZ_NPLZ01000001.1 Protein Homology CDS 152281 153102 . + 0 ID=cds-WP_094887519.1;Parent=gene-CCO53_RS00790;Dbxref=GenBank:WP_094887519.1;Name=WP_094887519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197552.1;locus_tag=CCO53_RS00790;product=DUF932 domain-containing protein;protein_id=WP_094887519.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 153115 153615 . + . ID=gene-CCO53_RS00795;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CCO53_RS00795;old_locus_tag=CCO53_00795 NZ_NPLZ01000001.1 Protein Homology CDS 153115 153615 . + 0 ID=cds-WP_094887520.1;Parent=gene-CCO53_RS00795;Dbxref=GenBank:WP_094887520.1;Name=WP_094887520.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090292.1;locus_tag=CCO53_RS00795;product=RadC family protein;protein_id=WP_094887520.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 153612 153833 . + . ID=gene-CCO53_RS00800;Name=CCO53_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00800;old_locus_tag=CCO53_00800 NZ_NPLZ01000001.1 Protein Homology CDS 153612 153833 . + 0 ID=cds-WP_094887521.1;Parent=gene-CCO53_RS00800;Dbxref=GenBank:WP_094887521.1;Name=WP_094887521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246875.1;locus_tag=CCO53_RS00800;product=DUF987 family protein;protein_id=WP_094887521.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 153856 154197 . + . ID=gene-CCO53_RS00805;Name=CCO53_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00805;old_locus_tag=CCO53_00805 NZ_NPLZ01000001.1 Protein Homology CDS 153856 154197 . + 0 ID=cds-WP_094887522.1;Parent=gene-CCO53_RS00805;Dbxref=GenBank:WP_094887522.1;Name=WP_094887522.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380486.1;locus_tag=CCO53_RS00805;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_094887522.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 154241 154582 . + . ID=gene-CCO53_RS00810;Name=CCO53_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00810;old_locus_tag=CCO53_00810 NZ_NPLZ01000001.1 Protein Homology CDS 154241 154582 . + 0 ID=cds-WP_094887523.1;Parent=gene-CCO53_RS00810;Dbxref=GenBank:WP_094887523.1;Name=WP_094887523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194750.1;locus_tag=CCO53_RS00810;product=TA system toxin CbtA family protein;protein_id=WP_094887523.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 154698 155528 . + . ID=gene-CCO53_RS00815;Name=CCO53_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00815;old_locus_tag=CCO53_00815 NZ_NPLZ01000001.1 Protein Homology CDS 154698 155528 . + 0 ID=cds-WP_201792737.1;Parent=gene-CCO53_RS00815;Dbxref=GenBank:WP_201792737.1;Name=WP_201792737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=CCO53_RS00815;product=DUF4942 domain-containing protein;protein_id=WP_201792737.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 155635 155710 . - . ID=gene-CCO53_RS00820;Name=CCO53_RS00820;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS00820;old_locus_tag=CCO53_00820 NZ_NPLZ01000001.1 tRNAscan-SE tRNA 155635 155710 . - . ID=rna-CCO53_RS00820;Parent=gene-CCO53_RS00820;anticodon=(pos:complement(155675..155677));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS00820;product=tRNA-Ile NZ_NPLZ01000001.1 tRNAscan-SE exon 155635 155710 . - . ID=exon-CCO53_RS00820-1;Parent=rna-CCO53_RS00820;anticodon=(pos:complement(155675..155677));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS00820;product=tRNA-Ile NZ_NPLZ01000001.1 RefSeq gene 155836 156342 . + . ID=gene-CCO53_RS00825;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=CCO53_RS00825;old_locus_tag=CCO53_00825 NZ_NPLZ01000001.1 Protein Homology CDS 155836 156342 . + 0 ID=cds-WP_000237776.1;Parent=gene-CCO53_RS00825;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=CCO53_RS00825;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 156466 158448 . - . ID=gene-CCO53_RS00830;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CCO53_RS00830;old_locus_tag=CCO53_00830 NZ_NPLZ01000001.1 Protein Homology CDS 156466 158448 . - 0 ID=cds-WP_001120159.1;Parent=gene-CCO53_RS00830;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=CCO53_RS00830;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 158463 160208 . - . ID=gene-CCO53_RS00835;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CCO53_RS00835;old_locus_tag=CCO53_00835 NZ_NPLZ01000001.1 Protein Homology CDS 158463 160208 . - 0 ID=cds-WP_000918865.1;Parent=gene-CCO53_RS00835;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=CCO53_RS00835;product=DNA primase;protein_id=WP_000918865.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 160444 160659 . - . ID=gene-CCO53_RS00840;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CCO53_RS00840;old_locus_tag=CCO53_00840 NZ_NPLZ01000001.1 Protein Homology CDS 160444 160659 . - 0 ID=cds-WP_001144069.1;Parent=gene-CCO53_RS00840;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=CCO53_RS00840;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 160887 161900 . + . ID=gene-CCO53_RS00850;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CCO53_RS00850;old_locus_tag=CCO53_00850 NZ_NPLZ01000001.1 Protein Homology CDS 160887 161900 . + 0 ID=cds-WP_001264391.1;Parent=gene-CCO53_RS00850;Dbxref=GenBank:WP_001264391.1;Name=WP_001264391.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=CCO53_RS00850;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264391.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq pseudogene 162023 162166 . - . ID=gene-CCO53_RS23585;Name=CCO53_RS23585;end_range=162166,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23585;partial=true;pseudo=true;start_range=.,162023 NZ_NPLZ01000001.1 Protein Homology CDS 162023 162166 . - 0 ID=cds-CCO53_RS23585;Parent=gene-CCO53_RS23585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=162166,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=CCO53_RS23585;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,162023;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 162150 162761 . - . ID=gene-CCO53_RS00860;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CCO53_RS00860;old_locus_tag=CCO53_00860 NZ_NPLZ01000001.1 Protein Homology CDS 162150 162761 . - 0 ID=cds-WP_001272784.1;Parent=gene-CCO53_RS00860;Dbxref=GenBank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=CCO53_RS00860;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 162868 163227 . + . ID=gene-CCO53_RS00865;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CCO53_RS00865;old_locus_tag=CCO53_00865 NZ_NPLZ01000001.1 Protein Homology CDS 162868 163227 . + 0 ID=cds-WP_000355776.1;Parent=gene-CCO53_RS00865;Dbxref=GenBank:WP_000355776.1;Name=WP_000355776.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=CCO53_RS00865;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_000355776.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 163325 164146 . + . ID=gene-CCO53_RS00870;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=CCO53_RS00870;old_locus_tag=CCO53_00870 NZ_NPLZ01000001.1 Protein Homology CDS 163325 164146 . + 0 ID=cds-WP_001281933.1;Parent=gene-CCO53_RS00870;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=CCO53_RS00870;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 164251 165492 . - . ID=gene-CCO53_RS00875;Name=CCO53_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00875;old_locus_tag=CCO53_00875 NZ_NPLZ01000001.1 Protein Homology CDS 164251 165492 . - 0 ID=cds-WP_000708447.1;Parent=gene-CCO53_RS00875;Dbxref=GenBank:WP_000708447.1;Name=WP_000708447.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=CCO53_RS00875;product=multifunctional CCA addition/repair protein;protein_id=WP_000708447.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 165555 166169 . - . ID=gene-CCO53_RS00880;Name=CCO53_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00880;old_locus_tag=CCO53_00880 NZ_NPLZ01000001.1 Protein Homology CDS 165555 166169 . - 0 ID=cds-WP_001125344.1;Parent=gene-CCO53_RS00880;Dbxref=GenBank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=CCO53_RS00880;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 166411 167712 . + . ID=gene-CCO53_RS00885;Name=CCO53_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00885;old_locus_tag=CCO53_00885 NZ_NPLZ01000001.1 Protein Homology CDS 166411 167712 . + 0 ID=cds-WP_023202100.1;Parent=gene-CCO53_RS00885;Dbxref=GenBank:WP_023202100.1;Name=WP_023202100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=CCO53_RS00885;product=inorganic triphosphatase;protein_id=WP_023202100.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 167830 170673 . + . ID=gene-CCO53_RS00890;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=CCO53_RS00890;old_locus_tag=CCO53_00890 NZ_NPLZ01000001.1 Protein Homology CDS 167830 170673 . + 0 ID=cds-WP_000188304.1;Parent=gene-CCO53_RS00890;Dbxref=GenBank:WP_000188304.1;Name=WP_000188304.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=CCO53_RS00890;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_000188304.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 170721 172154 . + . ID=gene-CCO53_RS00895;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=CCO53_RS00895;old_locus_tag=CCO53_00895 NZ_NPLZ01000001.1 Protein Homology CDS 170721 172154 . + 0 ID=cds-WP_000867682.1;Parent=gene-CCO53_RS00895;Dbxref=GenBank:WP_000867682.1;Name=WP_000867682.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=CCO53_RS00895;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867682.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 172314 172373 . - . ID=gene-CCO53_RS23880;Name=CCO53_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23880 NZ_NPLZ01000001.1 Protein Homology CDS 172314 172373 . - 0 ID=cds-WP_192936148.1;Parent=gene-CCO53_RS23880;Dbxref=GenBank:WP_192936148.1;Name=WP_192936148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=CCO53_RS23880;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_192936148.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 172613 174292 . - . ID=gene-CCO53_RS00905;Name=CCO53_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00905;old_locus_tag=CCO53_00905 NZ_NPLZ01000001.1 Protein Homology CDS 172613 174292 . - 0 ID=cds-WP_000342878.1;Parent=gene-CCO53_RS00905;Dbxref=GenBank:WP_000342878.1;Name=WP_000342878.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=CCO53_RS00905;product=flotillin family protein;protein_id=WP_000342878.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 174311 174931 . - . ID=gene-CCO53_RS00910;Name=CCO53_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00910;old_locus_tag=CCO53_00910 NZ_NPLZ01000001.1 Protein Homology CDS 174311 174931 . - 0 ID=cds-WP_000171739.1;Parent=gene-CCO53_RS00910;Dbxref=GenBank:WP_000171739.1;Name=WP_000171739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=CCO53_RS00910;product=OB-fold-containig protein;protein_id=WP_000171739.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 175189 175398 . + . ID=gene-CCO53_RS00915;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=CCO53_RS00915;old_locus_tag=CCO53_00915 NZ_NPLZ01000001.1 Protein Homology CDS 175189 175398 . + 0 ID=cds-WP_000928927.1;Parent=gene-CCO53_RS00915;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=CCO53_RS00915;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 175473 175769 . - . ID=gene-CCO53_RS00920;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=CCO53_RS00920;old_locus_tag=CCO53_00920 NZ_NPLZ01000001.1 Protein Homology CDS 175473 175769 . - 0 ID=cds-WP_000566824.1;Parent=gene-CCO53_RS00920;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=CCO53_RS00920;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11 NZ_NPLZ01000001.1 cmsearch riboswitch 175902 176100 . + . ID=id-NZ_NPLZ01000001.1:175902..176100;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPLZ01000001.1 RefSeq gene 176206 176859 . + . ID=gene-CCO53_RS00925;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=CCO53_RS00925;old_locus_tag=CCO53_00925 NZ_NPLZ01000001.1 Protein Homology CDS 176206 176859 . + 0 ID=cds-WP_058331657.1;Parent=gene-CCO53_RS00925;Dbxref=GenBank:WP_058331657.1;Name=WP_058331657.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=CCO53_RS00925;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_058331657.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 177030 177707 . - . ID=gene-CCO53_RS00930;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=CCO53_RS00930;old_locus_tag=CCO53_00930 NZ_NPLZ01000001.1 Protein Homology CDS 177030 177707 . - 0 ID=cds-WP_000345576.1;Parent=gene-CCO53_RS00930;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=CCO53_RS00930;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 177722 178393 . - . ID=gene-CCO53_RS00935;Name=CCO53_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00935;old_locus_tag=CCO53_00935 NZ_NPLZ01000001.1 Protein Homology CDS 177722 178393 . - 0 ID=cds-WP_000096232.1;Parent=gene-CCO53_RS00935;Dbxref=GenBank:WP_000096232.1;Name=WP_000096232.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=CCO53_RS00935;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096232.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 178413 180209 . - . ID=gene-CCO53_RS00940;Name=CCO53_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00940;old_locus_tag=CCO53_00940 NZ_NPLZ01000001.1 Protein Homology CDS 178413 180209 . - 0 ID=cds-WP_000460259.1;Parent=gene-CCO53_RS00940;Dbxref=GenBank:WP_000460259.1;Name=WP_000460259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=CCO53_RS00940;product=aryl-sulfate sulfotransferase;protein_id=WP_000460259.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 180609 180785 . + . ID=gene-CCO53_RS24175;Name=CCO53_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24175;old_locus_tag=CCO53_00945 NZ_NPLZ01000001.1 Protein Homology CDS 180609 180785 . + 0 ID=cds-WP_000469259.1;Parent=gene-CCO53_RS24175;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=CCO53_RS24175;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 180852 181625 . - . ID=gene-CCO53_RS00950;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=CCO53_RS00950;old_locus_tag=CCO53_00950 NZ_NPLZ01000001.1 Protein Homology CDS 180852 181625 . - 0 ID=cds-WP_000115871.1;Parent=gene-CCO53_RS00950;Dbxref=GenBank:WP_000115871.1;Name=WP_000115871.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=CCO53_RS00950;product=zinc transporter ZupT;protein_id=WP_000115871.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 181766 182554 . + . ID=gene-CCO53_RS00955;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=CCO53_RS00955;old_locus_tag=CCO53_00955 NZ_NPLZ01000001.1 Protein Homology CDS 181766 182554 . + 0 ID=cds-WP_023232031.1;Parent=gene-CCO53_RS00955;Dbxref=GenBank:WP_023232031.1;Name=WP_023232031.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=CCO53_RS00955;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_023232031.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 182615 183778 . - . ID=gene-CCO53_RS00960;Name=CCO53_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00960;old_locus_tag=CCO53_00960 NZ_NPLZ01000001.1 Protein Homology CDS 182615 183778 . - 0 ID=cds-WP_020839017.1;Parent=gene-CCO53_RS00960;Dbxref=GenBank:WP_020839017.1;Name=WP_020839017.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=CCO53_RS00960;product=glutathionylspermidine synthase family protein;protein_id=WP_020839017.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 183784 184455 . - . ID=gene-CCO53_RS00965;Name=CCO53_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00965;old_locus_tag=CCO53_00965 NZ_NPLZ01000001.1 Protein Homology CDS 183784 184455 . - 0 ID=cds-WP_000831528.1;Parent=gene-CCO53_RS00965;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=CCO53_RS00965;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 184668 186143 . - . ID=gene-CCO53_RS00975;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=CCO53_RS00975;old_locus_tag=CCO53_00975 NZ_NPLZ01000001.1 Protein Homology CDS 184668 186143 . - 0 ID=cds-WP_015899378.1;Parent=gene-CCO53_RS00975;Dbxref=GenBank:WP_015899378.1;Name=WP_015899378.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=CCO53_RS00975;product=outer membrane channel protein TolC;protein_id=WP_015899378.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 186344 186976 . + . ID=gene-CCO53_RS00980;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=CCO53_RS00980;old_locus_tag=CCO53_00980 NZ_NPLZ01000001.1 Protein Homology CDS 186344 186976 . + 0 ID=cds-WP_001231950.1;Parent=gene-CCO53_RS00980;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=CCO53_RS00980;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 186973 187395 . + . ID=gene-CCO53_RS00985;Name=CCO53_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS00985;old_locus_tag=CCO53_00985 NZ_NPLZ01000001.1 Protein Homology CDS 186973 187395 . + 0 ID=cds-WP_000833404.1;Parent=gene-CCO53_RS00985;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=CCO53_RS00985;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 187420 188247 . + . ID=gene-CCO53_RS00990;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=CCO53_RS00990;old_locus_tag=CCO53_00990 NZ_NPLZ01000001.1 Protein Homology CDS 187420 188247 . + 0 ID=cds-WP_000444735.1;Parent=gene-CCO53_RS00990;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=CCO53_RS00990;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 188247 188828 . + . ID=gene-CCO53_RS00995;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=CCO53_RS00995;old_locus_tag=CCO53_00995 NZ_NPLZ01000001.1 Protein Homology CDS 188247 188828 . + 0 ID=cds-WP_000105725.1;Parent=gene-CCO53_RS00995;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=CCO53_RS00995;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 188856 190748 . + . ID=gene-CCO53_RS01000;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CCO53_RS01000;old_locus_tag=CCO53_01000 NZ_NPLZ01000001.1 Protein Homology CDS 188856 190748 . + 0 ID=cds-WP_000195318.1;Parent=gene-CCO53_RS01000;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=CCO53_RS01000;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 190873 191187 . - . ID=gene-CCO53_RS01005;Name=CCO53_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01005;old_locus_tag=CCO53_01005 NZ_NPLZ01000001.1 Protein Homology CDS 190873 191187 . - 0 ID=cds-WP_058331658.1;Parent=gene-CCO53_RS01005;Dbxref=GenBank:WP_058331658.1;Name=WP_058331658.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=CCO53_RS01005;product=putative quinol monooxygenase;protein_id=WP_058331658.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 191219 191800 . - . ID=gene-CCO53_RS01010;Name=CCO53_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01010;old_locus_tag=CCO53_01010 NZ_NPLZ01000001.1 Protein Homology CDS 191219 191800 . - 0 ID=cds-WP_094887524.1;Parent=gene-CCO53_RS01010;Dbxref=GenBank:WP_094887524.1;Name=WP_094887524.1;Ontology_term=GO:0008753,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=CCO53_RS01010;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_094887524.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 191907 193256 . - . ID=gene-CCO53_RS01015;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=CCO53_RS01015;old_locus_tag=CCO53_01015 NZ_NPLZ01000001.1 Protein Homology CDS 191907 193256 . - 0 ID=cds-WP_094887525.1;Parent=gene-CCO53_RS01015;Dbxref=GenBank:WP_094887525.1;Name=WP_094887525.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=CCO53_RS01015;product=quorum sensing histidine kinase QseC;protein_id=WP_094887525.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 193253 193912 . - . ID=gene-CCO53_RS01020;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=CCO53_RS01020;old_locus_tag=CCO53_01020 NZ_NPLZ01000001.1 Protein Homology CDS 193253 193912 . - 0 ID=cds-WP_001221574.1;Parent=gene-CCO53_RS01020;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=CCO53_RS01020;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 194064 194456 . + . ID=gene-CCO53_RS01025;Name=CCO53_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01025;old_locus_tag=CCO53_01025 NZ_NPLZ01000001.1 Protein Homology CDS 194064 194456 . + 0 ID=cds-WP_000731552.1;Parent=gene-CCO53_RS01025;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=CCO53_RS01025;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 194528 195394 . + . ID=gene-CCO53_RS01030;Name=CCO53_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01030;old_locus_tag=CCO53_01030 NZ_NPLZ01000001.1 Protein Homology CDS 194528 195394 . + 0 ID=cds-WP_094887526.1;Parent=gene-CCO53_RS01030;Dbxref=GenBank:WP_094887526.1;Name=WP_094887526.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=CCO53_RS01030;product=AraC family transcriptional regulator;protein_id=WP_094887526.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 195505 197763 . + . ID=gene-CCO53_RS01035;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CCO53_RS01035;old_locus_tag=CCO53_01035 NZ_NPLZ01000001.1 Protein Homology CDS 195505 197763 . + 0 ID=cds-WP_001281861.1;Parent=gene-CCO53_RS01035;Dbxref=GenBank:WP_001281861.1;Name=WP_001281861.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=CCO53_RS01035;product=DNA topoisomerase IV subunit A;protein_id=WP_001281861.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 198020 198757 . + . ID=gene-CCO53_RS01040;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=CCO53_RS01040;old_locus_tag=CCO53_01040 NZ_NPLZ01000001.1 Protein Homology CDS 198020 198757 . + 0 ID=cds-WP_000965730.1;Parent=gene-CCO53_RS01040;Dbxref=GenBank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=CCO53_RS01040;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 198831 200243 . + . ID=gene-CCO53_RS01045;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=CCO53_RS01045;old_locus_tag=CCO53_01045 NZ_NPLZ01000001.1 Protein Homology CDS 198831 200243 . + 0 ID=cds-WP_000010658.1;Parent=gene-CCO53_RS01045;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=CCO53_RS01045;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 200264 201184 . + . ID=gene-CCO53_RS01050;Name=CCO53_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01050;old_locus_tag=CCO53_01050 NZ_NPLZ01000001.1 Protein Homology CDS 200264 201184 . + 0 ID=cds-WP_058331660.1;Parent=gene-CCO53_RS01050;Dbxref=GenBank:WP_058331660.1;Name=WP_058331660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222782.1;locus_tag=CCO53_RS01050;product=hypothetical protein;protein_id=WP_058331660.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 201874 202779 . + . ID=gene-CCO53_RS24225;Name=CCO53_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24225 NZ_NPLZ01000001.1 Protein Homology CDS 201874 202779 . + 0 ID=cds-WP_306293225.1;Parent=gene-CCO53_RS24225;Dbxref=GenBank:WP_306293225.1;Name=WP_306293225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269658.1;locus_tag=CCO53_RS24225;product=hypothetical protein;protein_id=WP_306293225.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 202795 204219 . + . ID=gene-CCO53_RS01060;Name=CCO53_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01060;old_locus_tag=CCO53_01060 NZ_NPLZ01000001.1 Protein Homology CDS 202795 204219 . + 0 ID=cds-WP_080197995.1;Parent=gene-CCO53_RS01060;Dbxref=GenBank:WP_080197995.1;Name=WP_080197995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384560.1;locus_tag=CCO53_RS01060;product=hypothetical protein;protein_id=WP_080197995.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 204284 205705 . + . ID=gene-CCO53_RS01065;Name=CCO53_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01065;old_locus_tag=CCO53_01065 NZ_NPLZ01000001.1 Protein Homology CDS 204284 205705 . + 0 ID=cds-WP_061371873.1;Parent=gene-CCO53_RS01065;Dbxref=GenBank:WP_061371873.1;Name=WP_061371873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528005.1;locus_tag=CCO53_RS01065;product=DUF4459 domain-containing protein;protein_id=WP_061371873.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 205840 208011 . + . ID=gene-CCO53_RS01070;Name=CCO53_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01070;old_locus_tag=CCO53_01070 NZ_NPLZ01000001.1 Protein Homology CDS 205840 208011 . + 0 ID=cds-WP_080197994.1;Parent=gene-CCO53_RS01070;Dbxref=GenBank:WP_080197994.1;Name=WP_080197994.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=CCO53_RS01070;product=YgiQ family radical SAM protein;protein_id=WP_080197994.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 208214 208408 . + . ID=gene-CCO53_RS01075;Name=CCO53_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01075;old_locus_tag=CCO53_01075 NZ_NPLZ01000001.1 GeneMarkS-2+ CDS 208214 208408 . + 0 ID=cds-WP_023202150.1;Parent=gene-CCO53_RS01075;Dbxref=GenBank:WP_023202150.1;Name=WP_023202150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS01075;product=hypothetical protein;protein_id=WP_023202150.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 208566 209021 . - . ID=gene-CCO53_RS01080;Name=CCO53_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01080;old_locus_tag=CCO53_01080 NZ_NPLZ01000001.1 Protein Homology CDS 208566 209021 . - 0 ID=cds-WP_000128242.1;Parent=gene-CCO53_RS01080;Dbxref=GenBank:WP_000128242.1;Name=WP_000128242.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=CCO53_RS01080;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq pseudogene 209066 210551 . - . ID=gene-CCO53_RS01085;Name=CCO53_RS01085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS01085;old_locus_tag=CCO53_01085;pseudo=true NZ_NPLZ01000001.1 Protein Homology CDS 209066 210551 . - 0 ID=cds-CCO53_RS01085;Parent=gene-CCO53_RS01085;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=CCO53_RS01085;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 210717 211544 . - . ID=gene-CCO53_RS01090;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=CCO53_RS01090;old_locus_tag=CCO53_01090 NZ_NPLZ01000001.1 Protein Homology CDS 210717 211544 . - 0 ID=cds-WP_000013100.1;Parent=gene-CCO53_RS01090;Dbxref=GenBank:WP_000013100.1;Name=WP_000013100.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=CCO53_RS01090;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013100.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 211650 212813 . - . ID=gene-CCO53_RS01095;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=CCO53_RS01095;old_locus_tag=CCO53_01095 NZ_NPLZ01000001.1 Protein Homology CDS 211650 212813 . - 0 ID=cds-WP_080198418.1;Parent=gene-CCO53_RS01095;Dbxref=GenBank:WP_080198418.1;Name=WP_080198418.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=CCO53_RS01095;product=alcohol dehydrogenase;protein_id=WP_080198418.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 213006 213905 . + . ID=gene-CCO53_RS01100;Name=CCO53_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01100;old_locus_tag=CCO53_01100 NZ_NPLZ01000001.1 Protein Homology CDS 213006 213905 . + 0 ID=cds-WP_001078198.1;Parent=gene-CCO53_RS01100;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=CCO53_RS01100;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 213969 214628 . - . ID=gene-CCO53_RS01105;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=CCO53_RS01105;old_locus_tag=CCO53_01105 NZ_NPLZ01000001.1 Protein Homology CDS 213969 214628 . - 0 ID=cds-WP_000268444.1;Parent=gene-CCO53_RS01105;Dbxref=GenBank:WP_000268444.1;Name=WP_000268444.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=CCO53_RS01105;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268444.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 214768 215955 . - . ID=gene-CCO53_RS01110;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CCO53_RS01110;old_locus_tag=CCO53_01110 NZ_NPLZ01000001.1 Protein Homology CDS 214768 215955 . - 0 ID=cds-WP_000130267.1;Parent=gene-CCO53_RS01110;Dbxref=GenBank:WP_000130267.1;Name=WP_000130267.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=CCO53_RS01110;product=cystathionine beta-lyase;protein_id=WP_000130267.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 216207 216941 . + . ID=gene-CCO53_RS01120;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=CCO53_RS01120;old_locus_tag=CCO53_01120 NZ_NPLZ01000001.1 Protein Homology CDS 216207 216941 . + 0 ID=cds-WP_000527863.1;Parent=gene-CCO53_RS01120;Dbxref=GenBank:WP_000527863.1;Name=WP_000527863.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=CCO53_RS01120;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527863.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 216948 217373 . + . ID=gene-CCO53_RS01125;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=CCO53_RS01125;old_locus_tag=CCO53_01125 NZ_NPLZ01000001.1 Protein Homology CDS 216948 217373 . + 0 ID=cds-WP_001251476.1;Parent=gene-CCO53_RS01125;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=CCO53_RS01125;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 217486 218370 . - . ID=gene-CCO53_RS01130;Name=CCO53_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01130;old_locus_tag=CCO53_01130 NZ_NPLZ01000001.1 Protein Homology CDS 217486 218370 . - 0 ID=cds-WP_023202154.1;Parent=gene-CCO53_RS01130;Dbxref=GenBank:WP_023202154.1;Name=WP_023202154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=CCO53_RS01130;product=SDR family oxidoreductase;protein_id=WP_023202154.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 218494 218898 . - . ID=gene-CCO53_RS01135;Name=CCO53_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01135;old_locus_tag=CCO53_01135 NZ_NPLZ01000001.1 Protein Homology CDS 218494 218898 . - 0 ID=cds-WP_000665656.1;Parent=gene-CCO53_RS01135;Dbxref=GenBank:WP_000665656.1;Name=WP_000665656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=CCO53_RS01135;product=hypothetical protein;protein_id=WP_000665656.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 218885 219295 . - . ID=gene-CCO53_RS01140;Name=CCO53_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01140;old_locus_tag=CCO53_01140 NZ_NPLZ01000001.1 Protein Homology CDS 218885 219295 . - 0 ID=cds-WP_000936441.1;Parent=gene-CCO53_RS01140;Dbxref=GenBank:WP_000936441.1;Name=WP_000936441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=CCO53_RS01140;product=hypothetical protein;protein_id=WP_000936441.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 219399 219902 . + . ID=gene-CCO53_RS01145;Name=CCO53_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01145;old_locus_tag=CCO53_01145 NZ_NPLZ01000001.1 Protein Homology CDS 219399 219902 . + 0 ID=cds-WP_001534190.1;Parent=gene-CCO53_RS01145;Dbxref=GenBank:WP_001534190.1;Name=WP_001534190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=CCO53_RS01145;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001534190.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 220181 220675 . + . ID=gene-CCO53_RS01150;Name=CCO53_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01150;old_locus_tag=CCO53_01150 NZ_NPLZ01000001.1 Protein Homology CDS 220181 220675 . + 0 ID=cds-WP_000439335.1;Parent=gene-CCO53_RS01150;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=CCO53_RS01150;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 220982 222625 . + . ID=gene-CCO53_RS01155;Name=CCO53_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01155;old_locus_tag=CCO53_01155 NZ_NPLZ01000001.1 Protein Homology CDS 220982 222625 . + 0 ID=cds-WP_001238433.1;Parent=gene-CCO53_RS01155;Dbxref=GenBank:WP_001238433.1;Name=WP_001238433.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=CCO53_RS01155;product=methyl-accepting chemotaxis protein;protein_id=WP_001238433.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 222710 222997 . + . ID=gene-CCO53_RS01160;Name=CCO53_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01160;old_locus_tag=CCO53_01160 NZ_NPLZ01000001.1 Protein Homology CDS 222710 222997 . + 0 ID=cds-WP_001059119.1;Parent=gene-CCO53_RS01160;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=CCO53_RS01160;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 223187 224305 . + . ID=gene-CCO53_RS01170;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=CCO53_RS01170;old_locus_tag=CCO53_01170 NZ_NPLZ01000001.1 Protein Homology CDS 223187 224305 . + 0 ID=cds-WP_000145429.1;Parent=gene-CCO53_RS01170;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=CCO53_RS01170;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 224308 225294 . + . ID=gene-CCO53_RS01175;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=CCO53_RS01175;old_locus_tag=CCO53_01175 NZ_NPLZ01000001.1 Protein Homology CDS 224308 225294 . + 0 ID=cds-WP_001081721.1;Parent=gene-CCO53_RS01175;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=CCO53_RS01175;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 225284 226462 . + . ID=gene-CCO53_RS01180;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=CCO53_RS01180;old_locus_tag=CCO53_01180 NZ_NPLZ01000001.1 Protein Homology CDS 225284 226462 . + 0 ID=cds-WP_000017678.1;Parent=gene-CCO53_RS01180;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=CCO53_RS01180;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 226459 228162 . + . ID=gene-CCO53_RS01185;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=CCO53_RS01185;old_locus_tag=CCO53_01185 NZ_NPLZ01000001.1 Protein Homology CDS 226459 228162 . + 0 ID=cds-WP_000083044.1;Parent=gene-CCO53_RS01185;Dbxref=GenBank:WP_000083044.1;Name=WP_000083044.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=CCO53_RS01185;product=hydrogenase 2 large subunit;protein_id=WP_000083044.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 228162 228656 . + . ID=gene-CCO53_RS01190;Name=CCO53_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01190;old_locus_tag=CCO53_01190 NZ_NPLZ01000001.1 Protein Homology CDS 228162 228656 . + 0 ID=cds-WP_001221962.1;Parent=gene-CCO53_RS01190;Dbxref=GenBank:WP_001221962.1;Name=WP_001221962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=CCO53_RS01190;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221962.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 228649 229137 . + . ID=gene-CCO53_RS01195;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=CCO53_RS01195;old_locus_tag=CCO53_01195 NZ_NPLZ01000001.1 Protein Homology CDS 228649 229137 . + 0 ID=cds-WP_000004951.1;Parent=gene-CCO53_RS01195;Dbxref=GenBank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=CCO53_RS01195;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 229130 229471 . + . ID=gene-CCO53_RS01200;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO53_RS01200;old_locus_tag=CCO53_01200 NZ_NPLZ01000001.1 Protein Homology CDS 229130 229471 . + 0 ID=cds-WP_000544945.1;Parent=gene-CCO53_RS01200;Dbxref=GenBank:WP_000544945.1;Name=WP_000544945.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=CCO53_RS01200;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 229499 229747 . + . ID=gene-CCO53_RS01205;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=CCO53_RS01205;old_locus_tag=CCO53_01205 NZ_NPLZ01000001.1 Protein Homology CDS 229499 229747 . + 0 ID=cds-WP_094887528.1;Parent=gene-CCO53_RS01205;Dbxref=GenBank:WP_094887528.1;Name=WP_094887528.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=CCO53_RS01205;product=hydrogenase maturation factor HybG;protein_id=WP_094887528.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 229823 230875 . + . ID=gene-CCO53_RS01210;Name=CCO53_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01210;old_locus_tag=CCO53_01210 NZ_NPLZ01000001.1 Protein Homology CDS 229823 230875 . + 0 ID=cds-WP_094887529.1;Parent=gene-CCO53_RS01210;Dbxref=GenBank:WP_094887529.1;Name=WP_094887529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=CCO53_RS01210;product=ABC transporter substrate-binding protein;protein_id=WP_094887529.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 230875 231585 . + . ID=gene-CCO53_RS01215;Name=CCO53_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01215;old_locus_tag=CCO53_01215 NZ_NPLZ01000001.1 Protein Homology CDS 230875 231585 . + 0 ID=cds-WP_001681930.1;Parent=gene-CCO53_RS01215;Dbxref=GenBank:WP_001681930.1;Name=WP_001681930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=CCO53_RS01215;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001681930.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 231653 232519 . - . ID=gene-CCO53_RS01220;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=CCO53_RS01220;old_locus_tag=CCO53_01220 NZ_NPLZ01000001.1 Protein Homology CDS 231653 232519 . - 0 ID=cds-WP_000774852.1;Parent=gene-CCO53_RS01220;Dbxref=GenBank:WP_000774852.1;Name=WP_000774852.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=CCO53_RS01220;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774852.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 232746 234602 . + . ID=gene-CCO53_RS01225;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=CCO53_RS01225;old_locus_tag=CCO53_01225 NZ_NPLZ01000001.1 Protein Homology CDS 232746 234602 . + 0 ID=cds-WP_000033690.1;Parent=gene-CCO53_RS01225;Dbxref=GenBank:WP_000033690.1;Name=WP_000033690.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=CCO53_RS01225;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033690.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 235272 236330 . + . ID=gene-CCO53_RS01235;Name=CCO53_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01235;old_locus_tag=CCO53_01235 NZ_NPLZ01000001.1 Protein Homology CDS 235272 236330 . + 0 ID=cds-WP_000475247.1;Parent=gene-CCO53_RS01235;Dbxref=GenBank:WP_000475247.1;Name=WP_000475247.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=CCO53_RS01235;product=methyl-accepting chemotaxis protein;protein_id=WP_000475247.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 236630 238042 . - . ID=gene-CCO53_RS01240;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=CCO53_RS01240;old_locus_tag=CCO53_01240 NZ_NPLZ01000001.1 Protein Homology CDS 236630 238042 . - 0 ID=cds-WP_000190185.1;Parent=gene-CCO53_RS01240;Dbxref=GenBank:WP_000190185.1;Name=WP_000190185.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=CCO53_RS01240;product=glucuronate isomerase;protein_id=WP_000190185.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 238054 239526 . - . ID=gene-CCO53_RS01245;Name=CCO53_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01245;old_locus_tag=CCO53_01245 NZ_NPLZ01000001.1 Protein Homology CDS 238054 239526 . - 0 ID=cds-WP_000437132.1;Parent=gene-CCO53_RS01245;Dbxref=GenBank:WP_000437132.1;Name=WP_000437132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=CCO53_RS01245;product=fructuronate reductase;protein_id=WP_000437132.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 239637 240821 . - . ID=gene-CCO53_RS01250;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=CCO53_RS01250;old_locus_tag=CCO53_01250 NZ_NPLZ01000001.1 Protein Homology CDS 239637 240821 . - 0 ID=cds-WP_000815487.1;Parent=gene-CCO53_RS01250;Dbxref=GenBank:WP_000815487.1;Name=WP_000815487.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=CCO53_RS01250;product=mannonate dehydratase;protein_id=WP_000815487.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 241226 242530 . + . ID=gene-CCO53_RS01255;Name=CCO53_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01255;old_locus_tag=CCO53_01255 NZ_NPLZ01000001.1 Protein Homology CDS 241226 242530 . + 0 ID=cds-WP_000784371.1;Parent=gene-CCO53_RS01255;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=CCO53_RS01255;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 242926 243804 . + . ID=gene-CCO53_RS01260;Name=CCO53_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01260;old_locus_tag=CCO53_01260 NZ_NPLZ01000001.1 Protein Homology CDS 242926 243804 . + 0 ID=cds-WP_000089254.1;Parent=gene-CCO53_RS01260;Dbxref=GenBank:WP_000089254.1;Name=WP_000089254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=CCO53_RS01260;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000089254.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 243843 244766 . + . ID=gene-CCO53_RS01265;Name=CCO53_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01265;old_locus_tag=CCO53_01265 NZ_NPLZ01000001.1 Protein Homology CDS 243843 244766 . + 0 ID=cds-WP_000540893.1;Parent=gene-CCO53_RS01265;Dbxref=GenBank:WP_000540893.1;Name=WP_000540893.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=CCO53_RS01265;product=polysaccharide deacetylase family protein;protein_id=WP_000540893.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 245492 245977 . + . ID=gene-CCO53_RS01270;Name=CCO53_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01270;old_locus_tag=CCO53_01270 NZ_NPLZ01000001.1 Protein Homology CDS 245492 245977 . + 0 ID=cds-WP_094887530.1;Parent=gene-CCO53_RS01270;Dbxref=GenBank:WP_094887530.1;Name=WP_094887530.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=CCO53_RS01270;product=Hcp family type VI secretion system effector;protein_id=WP_094887530.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 245977 246357 . + . ID=gene-CCO53_RS01275;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=CCO53_RS01275;old_locus_tag=CCO53_01275 NZ_NPLZ01000001.1 Protein Homology CDS 245977 246357 . + 0 ID=cds-WP_094887561.1;Parent=gene-CCO53_RS01275;Dbxref=GenBank:WP_094887561.1;Name=WP_094887561.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=CCO53_RS01275;product=anti-adapter protein IraD;protein_id=WP_094887561.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 246493 247977 . - . ID=gene-CCO53_RS01280;Name=CCO53_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01280;old_locus_tag=CCO53_01280 NZ_NPLZ01000001.1 Protein Homology CDS 246493 247977 . - 0 ID=cds-WP_080159991.1;Parent=gene-CCO53_RS01280;Dbxref=GenBank:WP_080159991.1;Name=WP_080159991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=CCO53_RS01280;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_080159991.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 248139 249440 . + . ID=gene-CCO53_RS01285;Name=CCO53_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01285;old_locus_tag=CCO53_01285 NZ_NPLZ01000001.1 Protein Homology CDS 248139 249440 . + 0 ID=cds-WP_001093168.1;Parent=gene-CCO53_RS01285;Dbxref=GenBank:WP_001093168.1;Name=WP_001093168.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=CCO53_RS01285;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001093168.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 249455 249829 . + . ID=gene-CCO53_RS01290;Name=CCO53_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01290;old_locus_tag=CCO53_01290 NZ_NPLZ01000001.1 Protein Homology CDS 249455 249829 . + 0 ID=cds-WP_000542984.1;Parent=gene-CCO53_RS01290;Dbxref=GenBank:WP_000542984.1;Name=WP_000542984.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=CCO53_RS01290;product=cupin domain-containing protein;protein_id=WP_000542984.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 250038 251537 . + . ID=gene-CCO53_RS01295;Name=CCO53_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01295;old_locus_tag=CCO53_01295 NZ_NPLZ01000001.1 Protein Homology CDS 250038 251537 . + 0 ID=cds-WP_080159990.1;Parent=gene-CCO53_RS01295;Dbxref=GenBank:WP_080159990.1;Name=WP_080159990.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=CCO53_RS01295;product=APC family permease;protein_id=WP_080159990.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 251515 252072 . + . ID=gene-CCO53_RS01300;Name=CCO53_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01300;old_locus_tag=CCO53_01300 NZ_NPLZ01000001.1 Protein Homology CDS 251515 252072 . + 0 ID=cds-WP_080159989.1;Parent=gene-CCO53_RS01300;Dbxref=GenBank:WP_080159989.1;Name=WP_080159989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=CCO53_RS01300;product=DUF3156 family protein;protein_id=WP_080159989.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 252176 252859 . - . ID=gene-CCO53_RS01305;Name=CCO53_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01305;old_locus_tag=CCO53_01305 NZ_NPLZ01000001.1 Protein Homology CDS 252176 252859 . - 0 ID=cds-WP_001275356.1;Parent=gene-CCO53_RS01305;Dbxref=GenBank:WP_001275356.1;Name=WP_001275356.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=CCO53_RS01305;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275356.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 254573 255892 . - . ID=gene-CCO53_RS01325;Name=CCO53_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01325;old_locus_tag=CCO53_01325 NZ_NPLZ01000001.1 Protein Homology CDS 254573 255892 . - 0 ID=cds-WP_080159987.1;Parent=gene-CCO53_RS01325;Dbxref=GenBank:WP_080159987.1;Name=WP_080159987.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534139.1;locus_tag=CCO53_RS01325;product=ferredoxin reductase family protein;protein_id=WP_080159987.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 255968 256231 . - . ID=gene-CCO53_RS01330;Name=CCO53_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01330;old_locus_tag=CCO53_01330 NZ_NPLZ01000001.1 Protein Homology CDS 255968 256231 . - 0 ID=cds-WP_001027081.1;Parent=gene-CCO53_RS01330;Dbxref=GenBank:WP_001027081.1;Name=WP_001027081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.6;locus_tag=CCO53_RS01330;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=WP_001027081.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 256257 256880 . - . ID=gene-CCO53_RS01335;Name=CCO53_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01335;old_locus_tag=CCO53_01335 NZ_NPLZ01000001.1 Protein Homology CDS 256257 256880 . - 0 ID=cds-WP_023254044.1;Parent=gene-CCO53_RS01335;Dbxref=GenBank:WP_023254044.1;Name=WP_023254044.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,azobenzene reductase activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697438.1;locus_tag=CCO53_RS01335;product=FMN-dependent NADH-azoreductase;protein_id=WP_023254044.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 256981 257415 . + . ID=gene-CCO53_RS23910;Name=CCO53_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23910 NZ_NPLZ01000001.1 Protein Homology CDS 256981 257415 . + 0 ID=cds-WP_237141191.1;Parent=gene-CCO53_RS23910;Dbxref=GenBank:WP_237141191.1;Name=WP_237141191.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012354.6;locus_tag=CCO53_RS23910;product=LysR family transcriptional regulator;protein_id=WP_237141191.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 257300 257911 . + . ID=gene-CCO53_RS01340;Name=CCO53_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01340;old_locus_tag=CCO53_01340 NZ_NPLZ01000001.1 Protein Homology CDS 257300 257911 . + 0 ID=cds-WP_237141190.1;Parent=gene-CCO53_RS01340;Dbxref=GenBank:WP_237141190.1;Name=WP_237141190.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=CCO53_RS01340;product=substrate binding domain-containing protein;protein_id=WP_237141190.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq pseudogene 258176 258404 . - . ID=gene-CCO53_RS24300;Name=CCO53_RS24300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24300;old_locus_tag=CCO53_01345;partial=true;pseudo=true;start_range=.,258176 NZ_NPLZ01000001.1 Protein Homology CDS 258176 258404 . - 0 ID=cds-CCO53_RS24300;Parent=gene-CCO53_RS24300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975783.1;locus_tag=CCO53_RS24300;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,258176;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 258563 258638 . - . ID=gene-CCO53_RS01350;Name=CCO53_RS01350;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS01350;old_locus_tag=CCO53_01350 NZ_NPLZ01000001.1 tRNAscan-SE tRNA 258563 258638 . - . ID=rna-CCO53_RS01350;Parent=gene-CCO53_RS01350;anticodon=(pos:complement(258603..258605));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS01350;product=tRNA-Phe NZ_NPLZ01000001.1 tRNAscan-SE exon 258563 258638 . - . ID=exon-CCO53_RS01350-1;Parent=rna-CCO53_RS01350;anticodon=(pos:complement(258603..258605));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS01350;product=tRNA-Phe NZ_NPLZ01000001.1 RefSeq gene 258744 259451 . - . ID=gene-CCO53_RS01355;Name=CCO53_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01355;old_locus_tag=CCO53_01355 NZ_NPLZ01000001.1 Protein Homology CDS 258744 259451 . - 0 ID=cds-WP_000234466.1;Parent=gene-CCO53_RS01355;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=CCO53_RS01355;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 259877 262012 . + . ID=gene-CCO53_RS01365;Name=CCO53_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01365;old_locus_tag=CCO53_01365 NZ_NPLZ01000001.1 Protein Homology CDS 259877 262012 . + 0 ID=cds-WP_058331711.1;Parent=gene-CCO53_RS01365;Dbxref=GenBank:WP_058331711.1;Name=WP_058331711.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=CCO53_RS01365;product=ornithine decarboxylase;protein_id=WP_058331711.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 262074 263330 . - . ID=gene-CCO53_RS01370;Name=CCO53_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01370;old_locus_tag=CCO53_01370 NZ_NPLZ01000001.1 Protein Homology CDS 262074 263330 . - 0 ID=cds-WP_001049803.1;Parent=gene-CCO53_RS01370;Dbxref=GenBank:WP_001049803.1;Name=WP_001049803.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=CCO53_RS01370;product=nucleoside permease;protein_id=WP_001049803.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 263547 264632 . - . ID=gene-CCO53_RS01375;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=CCO53_RS01375;old_locus_tag=CCO53_01375 NZ_NPLZ01000001.1 Protein Homology CDS 263547 264632 . - 0 ID=cds-WP_080159985.1;Parent=gene-CCO53_RS01375;Dbxref=GenBank:WP_080159985.1;Name=WP_080159985.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=CCO53_RS01375;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_080159985.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 264745 265020 . - . ID=gene-CCO53_RS01380;Name=CCO53_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01380;old_locus_tag=CCO53_01380 NZ_NPLZ01000001.1 Protein Homology CDS 264745 265020 . - 0 ID=cds-WP_000091706.1;Parent=gene-CCO53_RS01380;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=CCO53_RS01380;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 265048 266100 . - . ID=gene-CCO53_RS01385;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CCO53_RS01385;old_locus_tag=CCO53_01385 NZ_NPLZ01000001.1 Protein Homology CDS 265048 266100 . - 0 ID=cds-WP_001148957.1;Parent=gene-CCO53_RS01385;Dbxref=GenBank:WP_001148957.1;Name=WP_001148957.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=CCO53_RS01385;product=A/G-specific adenine glycosylase;protein_id=WP_001148957.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 266255 266974 . + . ID=gene-CCO53_RS01395;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CCO53_RS01395;old_locus_tag=CCO53_01395 NZ_NPLZ01000001.1 Protein Homology CDS 266255 266974 . + 0 ID=cds-WP_000786893.1;Parent=gene-CCO53_RS01395;Dbxref=GenBank:WP_000786893.1;Name=WP_000786893.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=CCO53_RS01395;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786893.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 266974 267300 . + . ID=gene-CCO53_RS01400;Name=CCO53_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01400;old_locus_tag=CCO53_01400 NZ_NPLZ01000001.1 Protein Homology CDS 266974 267300 . + 0 ID=cds-WP_001107574.1;Parent=gene-CCO53_RS01400;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=CCO53_RS01400;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 267350 268069 . + . ID=gene-CCO53_RS01405;Name=CCO53_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01405;old_locus_tag=CCO53_01405 NZ_NPLZ01000001.1 Protein Homology CDS 267350 268069 . + 0 ID=cds-WP_080159984.1;Parent=gene-CCO53_RS01405;Dbxref=GenBank:WP_080159984.1;Name=WP_080159984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=CCO53_RS01405;product=DUF2884 domain-containing protein;protein_id=WP_080159984.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 268258 269304 . + . ID=gene-CCO53_RS01410;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=CCO53_RS01410;old_locus_tag=CCO53_01410 NZ_NPLZ01000001.1 Protein Homology CDS 268258 269304 . + 0 ID=cds-WP_000394189.1;Parent=gene-CCO53_RS01410;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=CCO53_RS01410;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 269437 270444 . + . ID=gene-CCO53_RS01415;Name=CCO53_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01415;old_locus_tag=CCO53_01415 NZ_NPLZ01000001.1 Protein Homology CDS 269437 270444 . + 0 ID=cds-WP_076727165.1;Parent=gene-CCO53_RS01415;Dbxref=GenBank:WP_076727165.1;Name=WP_076727165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=CCO53_RS01415;product=DUF1202 family protein;protein_id=WP_076727165.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 270536 271672 . - . ID=gene-CCO53_RS01420;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CCO53_RS01420;old_locus_tag=CCO53_01420 NZ_NPLZ01000001.1 Protein Homology CDS 270536 271672 . - 0 ID=cds-WP_061371885.1;Parent=gene-CCO53_RS01420;Dbxref=GenBank:WP_061371885.1;Name=WP_061371885.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=CCO53_RS01420;product=radical SAM family heme chaperone HemW;protein_id=WP_061371885.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 271665 272258 . - . ID=gene-CCO53_RS01425;Name=CCO53_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01425;old_locus_tag=CCO53_01425 NZ_NPLZ01000001.1 Protein Homology CDS 271665 272258 . - 0 ID=cds-WP_001174769.1;Parent=gene-CCO53_RS01425;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=CCO53_RS01425;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 272266 272556 . - . ID=gene-CCO53_RS01430;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=CCO53_RS01430;old_locus_tag=CCO53_01430 NZ_NPLZ01000001.1 Protein Homology CDS 272266 272556 . - 0 ID=cds-WP_001277203.1;Parent=gene-CCO53_RS01430;Dbxref=GenBank:WP_001277203.1;Name=WP_001277203.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=CCO53_RS01430;product=DUF167 family protein YggU;protein_id=WP_001277203.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 272553 273119 . - . ID=gene-CCO53_RS01435;Name=CCO53_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01435;old_locus_tag=CCO53_01435 NZ_NPLZ01000001.1 Protein Homology CDS 272553 273119 . - 0 ID=cds-WP_001094848.1;Parent=gene-CCO53_RS01435;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=CCO53_RS01435;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 273138 273842 . - . ID=gene-CCO53_RS01440;Name=CCO53_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01440;old_locus_tag=CCO53_01440 NZ_NPLZ01000001.1 Protein Homology CDS 273138 273842 . - 0 ID=cds-WP_000997812.1;Parent=gene-CCO53_RS01440;Dbxref=GenBank:WP_000997812.1;Name=WP_000997812.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=CCO53_RS01440;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997812.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 273860 274840 . + . ID=gene-CCO53_RS01445;Name=CCO53_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01445;old_locus_tag=CCO53_01445 NZ_NPLZ01000001.1 Protein Homology CDS 273860 274840 . + 0 ID=cds-WP_001055644.1;Parent=gene-CCO53_RS01445;Dbxref=GenBank:WP_001055644.1;Name=WP_001055644.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=CCO53_RS01445;product=type IV pilus twitching motility protein PilT;protein_id=WP_001055644.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 274972 275658 . + . ID=gene-CCO53_RS01450;Name=CCO53_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01450;old_locus_tag=CCO53_01450 NZ_NPLZ01000001.1 Protein Homology CDS 274972 275658 . + 0 ID=cds-WP_000098337.1;Parent=gene-CCO53_RS01450;Dbxref=GenBank:WP_000098337.1;Name=WP_000098337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=CCO53_RS01450;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_000098337.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 275705 276121 . - . ID=gene-CCO53_RS01455;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CCO53_RS01455;old_locus_tag=CCO53_01455 NZ_NPLZ01000001.1 Protein Homology CDS 275705 276121 . - 0 ID=cds-WP_001285491.1;Parent=gene-CCO53_RS01455;Dbxref=GenBank:WP_001285491.1;Name=WP_001285491.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=CCO53_RS01455;product=Holliday junction resolvase RuvX;protein_id=WP_001285491.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 276121 276684 . - . ID=gene-CCO53_RS01460;Name=CCO53_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01460;old_locus_tag=CCO53_01460 NZ_NPLZ01000001.1 Protein Homology CDS 276121 276684 . - 0 ID=cds-WP_001053171.1;Parent=gene-CCO53_RS01460;Dbxref=GenBank:WP_001053171.1;Name=WP_001053171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=CCO53_RS01460;product=YqgE/AlgH family protein;protein_id=WP_001053171.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 276900 277847 . - . ID=gene-CCO53_RS01465;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=CCO53_RS01465;old_locus_tag=CCO53_01465 NZ_NPLZ01000001.1 Protein Homology CDS 276900 277847 . - 0 ID=cds-WP_000593248.1;Parent=gene-CCO53_RS01465;Dbxref=GenBank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=CCO53_RS01465;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 277867 278598 . - . ID=gene-CCO53_RS01470;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=CCO53_RS01470;old_locus_tag=CCO53_01470 NZ_NPLZ01000001.1 Protein Homology CDS 277867 278598 . - 0 ID=cds-WP_001675718.1;Parent=gene-CCO53_RS01470;Dbxref=GenBank:WP_001675718.1;Name=WP_001675718.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=CCO53_RS01470;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001675718.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 278675 279382 . - . ID=gene-CCO53_RS01475;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=CCO53_RS01475;old_locus_tag=CCO53_01475 NZ_NPLZ01000001.1 Protein Homology CDS 278675 279382 . - 0 ID=cds-WP_000286124.1;Parent=gene-CCO53_RS01475;Dbxref=GenBank:WP_000286124.1;Name=WP_000286124.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=CCO53_RS01475;product=deoxyribonuclease I;protein_id=WP_000286124.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 279477 279974 . - . ID=gene-CCO53_RS01480;Name=CCO53_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01480;old_locus_tag=CCO53_01480 NZ_NPLZ01000001.1 Protein Homology CDS 279477 279974 . - 0 ID=cds-WP_000856775.1;Parent=gene-CCO53_RS01480;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=CCO53_RS01480;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 280053 281447 . - . ID=gene-CCO53_RS01485;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=CCO53_RS01485;old_locus_tag=CCO53_01485 NZ_NPLZ01000001.1 Protein Homology CDS 280053 281447 . - 0 ID=cds-WP_001113171.1;Parent=gene-CCO53_RS01485;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=CCO53_RS01485;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 281940 283094 . - . ID=gene-CCO53_RS01490;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CCO53_RS01490;old_locus_tag=CCO53_01490 NZ_NPLZ01000001.1 Protein Homology CDS 281940 283094 . - 0 ID=cds-WP_001062140.1;Parent=gene-CCO53_RS01490;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=CCO53_RS01490;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 283150 283449 . + . ID=gene-CCO53_RS01495;Name=CCO53_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01495;old_locus_tag=CCO53_01495 NZ_NPLZ01000001.1 GeneMarkS-2+ CDS 283150 283449 . + 0 ID=cds-WP_001540882.1;Parent=gene-CCO53_RS01495;Dbxref=GenBank:WP_001540882.1;Name=WP_001540882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS01495;product=hypothetical protein;protein_id=WP_001540882.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 283509 283658 . + . ID=gene-CCO53_RS24180;Name=CCO53_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24180 NZ_NPLZ01000001.1 Protein Homology CDS 283509 283658 . + 0 ID=cds-WP_001751809.1;Parent=gene-CCO53_RS24180;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=CCO53_RS24180;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 283744 283875 . + . ID=gene-CCO53_RS01505;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=CCO53_RS01505;old_locus_tag=CCO53_01505 NZ_NPLZ01000001.1 Protein Homology CDS 283744 283875 . + 0 ID=cds-WP_000729109.1;Parent=gene-CCO53_RS01505;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=CCO53_RS01505;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 283884 285860 . + . ID=gene-CCO53_RS01510;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=CCO53_RS01510;old_locus_tag=CCO53_01510 NZ_NPLZ01000001.1 Protein Homology CDS 283884 285860 . + 0 ID=cds-WP_001278580.1;Parent=gene-CCO53_RS01510;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=CCO53_RS01510;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 286089 287009 . + . ID=gene-CCO53_RS01515;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=CCO53_RS01515;old_locus_tag=CCO53_01515 NZ_NPLZ01000001.1 Protein Homology CDS 286089 287009 . + 0 ID=cds-WP_000105550.1;Parent=gene-CCO53_RS01515;Dbxref=GenBank:WP_000105550.1;Name=WP_000105550.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=CCO53_RS01515;product=agmatinase;protein_id=WP_000105550.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq pseudogene 287013 287097 . + . ID=gene-CCO53_RS24305;Name=CCO53_RS24305;end_range=287097,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24305;partial=true;pseudo=true;start_range=.,287013 NZ_NPLZ01000001.1 Protein Homology CDS 287013 287097 . + 0 ID=cds-CCO53_RS24305;Parent=gene-CCO53_RS24305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=287097,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO53_RS24305;partial=true;product=hypothetical protein;pseudo=true;start_range=.,287013;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 287110 287868 . - . ID=gene-CCO53_RS01520;Name=CCO53_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01520;old_locus_tag=CCO53_01520 NZ_NPLZ01000001.1 Protein Homology CDS 287110 287868 . - 0 ID=cds-WP_000701830.1;Parent=gene-CCO53_RS01520;Dbxref=GenBank:WP_000701830.1;Name=WP_000701830.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=CCO53_RS01520;product=M48 family metallopeptidase;protein_id=WP_000701830.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 288144 290135 . + . ID=gene-CCO53_RS01525;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO53_RS01525;old_locus_tag=CCO53_01525 NZ_NPLZ01000001.1 Protein Homology CDS 288144 290135 . + 0 ID=cds-WP_023254462.1;Parent=gene-CCO53_RS01525;Dbxref=GenBank:WP_023254462.1;Name=WP_023254462.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=CCO53_RS01525;product=transketolase;protein_id=WP_023254462.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 290179 290835 . - . ID=gene-CCO53_RS01530;Name=CCO53_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01530;old_locus_tag=CCO53_01530 NZ_NPLZ01000001.1 Protein Homology CDS 290179 290835 . - 0 ID=cds-WP_094882200.1;Parent=gene-CCO53_RS01530;Dbxref=GenBank:WP_094882200.1;Name=WP_094882200.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=CCO53_RS01530;product=ABC transporter ATP-binding protein;protein_id=WP_094882200.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 290829 291506 . - . ID=gene-CCO53_RS01535;Name=CCO53_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01535;old_locus_tag=CCO53_01535 NZ_NPLZ01000001.1 Protein Homology CDS 290829 291506 . - 0 ID=cds-WP_001534176.1;Parent=gene-CCO53_RS01535;Dbxref=GenBank:WP_001534176.1;Name=WP_001534176.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=CCO53_RS01535;product=ABC transporter ATP-binding protein;protein_id=WP_001534176.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 291494 292201 . - . ID=gene-CCO53_RS01540;Name=CCO53_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01540;old_locus_tag=CCO53_01540 NZ_NPLZ01000001.1 Protein Homology CDS 291494 292201 . - 0 ID=cds-WP_000553280.1;Parent=gene-CCO53_RS01540;Dbxref=GenBank:WP_000553280.1;Name=WP_000553280.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=CCO53_RS01540;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553280.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 292202 292780 . - . ID=gene-CCO53_RS01545;Name=CCO53_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01545;old_locus_tag=CCO53_01545 NZ_NPLZ01000001.1 Protein Homology CDS 292202 292780 . - 0 ID=cds-WP_000124001.1;Parent=gene-CCO53_RS01545;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=CCO53_RS01545;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 292806 293231 . - . ID=gene-CCO53_RS01550;Name=CCO53_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01550;old_locus_tag=CCO53_01550 NZ_NPLZ01000001.1 Protein Homology CDS 292806 293231 . - 0 ID=cds-WP_000218566.1;Parent=gene-CCO53_RS01550;Dbxref=GenBank:WP_000218566.1;Name=WP_000218566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=CCO53_RS01550;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218566.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 293605 294651 . + . ID=gene-CCO53_RS01560;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=CCO53_RS01560;old_locus_tag=CCO53_01560 NZ_NPLZ01000001.1 Protein Homology CDS 293605 294651 . + 0 ID=cds-WP_000218338.1;Parent=gene-CCO53_RS01560;Dbxref=GenBank:WP_000218338.1;Name=WP_000218338.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=CCO53_RS01560;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 294673 295836 . + . ID=gene-CCO53_RS01565;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CCO53_RS01565;old_locus_tag=CCO53_01565 NZ_NPLZ01000001.1 Protein Homology CDS 294673 295836 . + 0 ID=cds-WP_000111274.1;Parent=gene-CCO53_RS01565;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=CCO53_RS01565;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 295938 297017 . + . ID=gene-CCO53_RS01570;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=CCO53_RS01570;old_locus_tag=CCO53_01570 NZ_NPLZ01000001.1 Protein Homology CDS 295938 297017 . + 0 ID=cds-WP_000034386.1;Parent=gene-CCO53_RS01570;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=CCO53_RS01570;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 297250 298110 . + . ID=gene-CCO53_RS01575;Name=CCO53_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01575;old_locus_tag=CCO53_01575 NZ_NPLZ01000001.1 Protein Homology CDS 297250 298110 . + 0 ID=cds-WP_000389833.1;Parent=gene-CCO53_RS01575;Dbxref=GenBank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=CCO53_RS01575;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 298298 298933 . + . ID=gene-CCO53_RS01580;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=CCO53_RS01580;old_locus_tag=CCO53_01580 NZ_NPLZ01000001.1 Protein Homology CDS 298298 298933 . + 0 ID=cds-WP_000626876.1;Parent=gene-CCO53_RS01580;Dbxref=GenBank:WP_000626876.1;Name=WP_000626876.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=CCO53_RS01580;product=arginine exporter ArgO;protein_id=WP_000626876.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 299027 299773 . + . ID=gene-CCO53_RS01585;Name=CCO53_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01585;old_locus_tag=CCO53_01585 NZ_NPLZ01000001.1 Protein Homology CDS 299027 299773 . + 0 ID=cds-WP_000669854.1;Parent=gene-CCO53_RS01585;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=CCO53_RS01585;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 300039 300932 . - . ID=gene-CCO53_RS01595;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=CCO53_RS01595;old_locus_tag=CCO53_01595 NZ_NPLZ01000001.1 Protein Homology CDS 300039 300932 . - 0 ID=cds-WP_000828345.1;Parent=gene-CCO53_RS01595;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=CCO53_RS01595;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 301086 301745 . + . ID=gene-CCO53_RS01600;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CCO53_RS01600;old_locus_tag=CCO53_01600 NZ_NPLZ01000001.1 Protein Homology CDS 301086 301745 . + 0 ID=cds-WP_000189741.1;Parent=gene-CCO53_RS01600;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=CCO53_RS01600;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 302012 303244 . + . ID=gene-CCO53_RS01605;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CCO53_RS01605;old_locus_tag=CCO53_01605 NZ_NPLZ01000001.1 Protein Homology CDS 302012 303244 . + 0 ID=cds-WP_001151627.1;Parent=gene-CCO53_RS01605;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=CCO53_RS01605;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 303625 304221 . - . ID=gene-CCO53_RS01610;Name=CCO53_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01610;old_locus_tag=CCO53_01610 NZ_NPLZ01000001.1 Protein Homology CDS 303625 304221 . - 0 ID=cds-WP_058331715.1;Parent=gene-CCO53_RS01610;Dbxref=GenBank:WP_058331715.1;Name=WP_058331715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=CCO53_RS01610;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_058331715.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 304242 304425 . - . ID=gene-CCO53_RS01615;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CCO53_RS01615;old_locus_tag=CCO53_01615 NZ_NPLZ01000001.1 cmsearch ncRNA 304242 304425 . - . ID=rna-CCO53_RS01615;Parent=gene-CCO53_RS01615;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS01615;product=6S RNA NZ_NPLZ01000001.1 cmsearch exon 304242 304425 . - . ID=exon-CCO53_RS01615-1;Parent=rna-CCO53_RS01615;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS01615;product=6S RNA NZ_NPLZ01000001.1 RefSeq gene 304467 304796 . - . ID=gene-CCO53_RS01620;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CCO53_RS01620;old_locus_tag=CCO53_01620 NZ_NPLZ01000001.1 Protein Homology CDS 304467 304796 . - 0 ID=cds-WP_001276011.1;Parent=gene-CCO53_RS01620;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=CCO53_RS01620;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 304963 305541 . + . ID=gene-CCO53_RS01630;Name=CCO53_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01630;old_locus_tag=CCO53_01630 NZ_NPLZ01000001.1 Protein Homology CDS 304963 305541 . + 0 ID=cds-WP_000027236.1;Parent=gene-CCO53_RS01630;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=CCO53_RS01630;product=YecA family protein;protein_id=WP_000027236.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 305567 306883 . + . ID=gene-CCO53_RS01635;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=CCO53_RS01635;old_locus_tag=CCO53_01635 NZ_NPLZ01000001.1 Protein Homology CDS 305567 306883 . + 0 ID=cds-WP_000193681.1;Parent=gene-CCO53_RS01635;Dbxref=GenBank:WP_000193681.1;Name=WP_000193681.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=CCO53_RS01635;product=Xaa-Pro aminopeptidase;protein_id=WP_000193681.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 306880 308058 . + . ID=gene-CCO53_RS01640;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=CCO53_RS01640;old_locus_tag=CCO53_01640 NZ_NPLZ01000001.1 Protein Homology CDS 306880 308058 . + 0 ID=cds-WP_094887532.1;Parent=gene-CCO53_RS01640;Dbxref=GenBank:WP_094887532.1;Name=WP_094887532.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=CCO53_RS01640;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_094887532.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 308184 309386 . + . ID=gene-CCO53_RS01645;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=CCO53_RS01645;old_locus_tag=CCO53_01645 NZ_NPLZ01000001.1 Protein Homology CDS 308184 309386 . + 0 ID=cds-WP_001192144.1;Parent=gene-CCO53_RS01645;Dbxref=GenBank:WP_001192144.1;Name=WP_001192144.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=CCO53_RS01645;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192144.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 309841 310935 . + . ID=gene-CCO53_RS01650;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CCO53_RS01650;old_locus_tag=CCO53_01650 NZ_NPLZ01000001.1 Protein Homology CDS 309841 310935 . + 0 ID=cds-WP_000068738.1;Parent=gene-CCO53_RS01650;Dbxref=GenBank:WP_000068738.1;Name=WP_000068738.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=CCO53_RS01650;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 310961 311350 . + . ID=gene-CCO53_RS01655;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CCO53_RS01655;old_locus_tag=CCO53_01655 NZ_NPLZ01000001.1 Protein Homology CDS 310961 311350 . + 0 ID=cds-WP_001295377.1;Parent=gene-CCO53_RS01655;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=CCO53_RS01655;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 311513 314386 . + . ID=gene-CCO53_RS01660;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CCO53_RS01660;old_locus_tag=CCO53_01660 NZ_NPLZ01000001.1 Protein Homology CDS 311513 314386 . + 0 ID=cds-WP_080159978.1;Parent=gene-CCO53_RS01660;Dbxref=GenBank:WP_080159978.1;Name=WP_080159978.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=CCO53_RS01660;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_080159978.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 314842 315735 . + . ID=gene-CCO53_RS01670;Name=CCO53_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01670;old_locus_tag=CCO53_01670 NZ_NPLZ01000001.1 Protein Homology CDS 314842 315735 . + 0 ID=cds-WP_000819375.1;Parent=gene-CCO53_RS01670;Dbxref=GenBank:WP_000819375.1;Name=WP_000819375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=CCO53_RS01670;product=transporter;protein_id=WP_000819375.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 315783 317216 . - . ID=gene-CCO53_RS01675;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=CCO53_RS01675;old_locus_tag=CCO53_01675 NZ_NPLZ01000001.1 Protein Homology CDS 315783 317216 . - 0 ID=cds-WP_001230140.1;Parent=gene-CCO53_RS01675;Dbxref=GenBank:WP_001230140.1;Name=WP_001230140.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=CCO53_RS01675;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001230140.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 317365 317676 . + . ID=gene-CCO53_RS01680;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=CCO53_RS01680;old_locus_tag=CCO53_01680 NZ_NPLZ01000001.1 Protein Homology CDS 317365 317676 . + 0 ID=cds-WP_061371892.1;Parent=gene-CCO53_RS01680;Dbxref=GenBank:WP_061371892.1;Name=WP_061371892.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=CCO53_RS01680;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_061371892.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 317840 318499 . + . ID=gene-CCO53_RS01685;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CCO53_RS01685;old_locus_tag=CCO53_01685 NZ_NPLZ01000001.1 Protein Homology CDS 317840 318499 . + 0 ID=cds-WP_000250289.1;Parent=gene-CCO53_RS01685;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=CCO53_RS01685;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 318615 319595 . - . ID=gene-CCO53_RS01695;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=CCO53_RS01695;old_locus_tag=CCO53_01695 NZ_NPLZ01000001.1 Protein Homology CDS 318615 319595 . - 0 ID=cds-WP_000874178.1;Parent=gene-CCO53_RS01695;Dbxref=GenBank:WP_000874178.1;Name=WP_000874178.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=CCO53_RS01695;product=tRNA-modifying protein YgfZ;protein_id=WP_000874178.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 319845 320111 . + . ID=gene-CCO53_RS01705;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=CCO53_RS01705;old_locus_tag=CCO53_01705 NZ_NPLZ01000001.1 Protein Homology CDS 319845 320111 . + 0 ID=cds-WP_000351186.1;Parent=gene-CCO53_RS01705;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=CCO53_RS01705;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 320092 320505 . + . ID=gene-CCO53_RS01710;Name=CCO53_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01710;old_locus_tag=CCO53_01710 NZ_NPLZ01000001.1 Protein Homology CDS 320092 320505 . + 0 ID=cds-WP_000244756.1;Parent=gene-CCO53_RS01710;Dbxref=GenBank:WP_000244756.1;Name=WP_000244756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=CCO53_RS01710;product=protein YgfX;protein_id=WP_000244756.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 320558 321079 . - . ID=gene-CCO53_RS01715;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=CCO53_RS01715;old_locus_tag=CCO53_01715 NZ_NPLZ01000001.1 Protein Homology CDS 320558 321079 . - 0 ID=cds-WP_001055885.1;Parent=gene-CCO53_RS01715;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=CCO53_RS01715;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 321192 322088 . + . ID=gene-CCO53_RS01720;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CCO53_RS01720;old_locus_tag=CCO53_01720 NZ_NPLZ01000001.1 Protein Homology CDS 321192 322088 . + 0 ID=cds-WP_000434300.1;Parent=gene-CCO53_RS01720;Dbxref=GenBank:WP_000434300.1;Name=WP_000434300.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=CCO53_RS01720;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434300.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 322112 322825 . + . ID=gene-CCO53_RS01725;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=CCO53_RS01725;old_locus_tag=CCO53_01725 NZ_NPLZ01000001.1 Protein Homology CDS 322112 322825 . + 0 ID=cds-WP_000745614.1;Parent=gene-CCO53_RS01725;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=CCO53_RS01725;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 322831 324564 . + . ID=gene-CCO53_RS01730;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CCO53_RS01730;old_locus_tag=CCO53_01730 NZ_NPLZ01000001.1 Protein Homology CDS 322831 324564 . + 0 ID=cds-WP_000813394.1;Parent=gene-CCO53_RS01730;Dbxref=GenBank:WP_000813394.1;Name=WP_000813394.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=CCO53_RS01730;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813394.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 324669 325767 . + . ID=gene-CCO53_RS01735;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CCO53_RS01735;old_locus_tag=CCO53_01735 NZ_NPLZ01000001.1 Protein Homology CDS 324669 324743 . + 0 ID=cds-WP_010989230.1;Parent=gene-CCO53_RS01735;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO53_RS01735;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPLZ01000001.1 Protein Homology CDS 324745 325767 . + 0 ID=cds-WP_010989230.1;Parent=gene-CCO53_RS01735;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO53_RS01735;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 325777 327294 . + . ID=gene-CCO53_RS01740;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CCO53_RS01740;old_locus_tag=CCO53_01740 NZ_NPLZ01000001.1 Protein Homology CDS 325777 327294 . + 0 ID=cds-WP_000003339.1;Parent=gene-CCO53_RS01740;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=CCO53_RS01740;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 327370 327915 . - . ID=gene-CCO53_RS01745;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=CCO53_RS01745;old_locus_tag=CCO53_01745 NZ_NPLZ01000001.1 Protein Homology CDS 327370 327915 . - 0 ID=cds-WP_000134000.1;Parent=gene-CCO53_RS01745;Dbxref=GenBank:WP_000134000.1;Name=WP_000134000.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=CCO53_RS01745;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000134000.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 328180 328938 . + . ID=gene-CCO53_RS01755;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=CCO53_RS01755;old_locus_tag=CCO53_01755 NZ_NPLZ01000001.1 Protein Homology CDS 328180 328938 . + 0 ID=cds-WP_000244325.1;Parent=gene-CCO53_RS01755;Dbxref=GenBank:WP_000244325.1;Name=WP_000244325.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=CCO53_RS01755;product=amidase activator ActS;protein_id=WP_000244325.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 329018 329091 . + . ID=gene-CCO53_RS01760;Name=CCO53_RS01760;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS01760;old_locus_tag=CCO53_01760 NZ_NPLZ01000001.1 tRNAscan-SE tRNA 329018 329091 . + . ID=rna-CCO53_RS01760;Parent=gene-CCO53_RS01760;anticodon=(pos:329050..329052);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS01760;product=tRNA-Gly NZ_NPLZ01000001.1 tRNAscan-SE exon 329018 329091 . + . ID=exon-CCO53_RS01760-1;Parent=rna-CCO53_RS01760;anticodon=(pos:329050..329052);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS01760;product=tRNA-Gly NZ_NPLZ01000001.1 RefSeq gene 329223 330029 . - . ID=gene-CCO53_RS01765;Name=CCO53_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01765;old_locus_tag=CCO53_01765 NZ_NPLZ01000001.1 Protein Homology CDS 329223 330029 . - 0 ID=cds-WP_077905136.1;Parent=gene-CCO53_RS01765;Dbxref=GenBank:WP_077905136.1;Name=WP_077905136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=CCO53_RS01765;product=DUF1460 domain-containing protein;protein_id=WP_077905136.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq pseudogene 330220 330390 . + . ID=gene-CCO53_RS23590;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=pseudogene;locus_tag=CCO53_RS23590;partial=true;pseudo=true;start_range=.,330220 NZ_NPLZ01000001.1 Protein Homology CDS 330220 330390 . + 0 ID=cds-CCO53_RS23590;Parent=gene-CCO53_RS23590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=CCO53_RS23590;partial=true;product=tRNA(fMet)-specific endonuclease VapC;pseudo=true;start_range=.,330220;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 331197 331733 . + . ID=gene-CCO53_RS01785;Name=CCO53_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01785;old_locus_tag=CCO53_01785 NZ_NPLZ01000001.1 Protein Homology CDS 331197 331733 . + 0 ID=cds-WP_001038499.1;Parent=gene-CCO53_RS01785;Dbxref=GenBank:WP_001038499.1;Name=WP_001038499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=CCO53_RS01785;product=STM3031 family outer membrane protein;protein_id=WP_001038499.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 331780 332412 . + . ID=gene-CCO53_RS01790;Name=CCO53_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01790;old_locus_tag=CCO53_01790 NZ_NPLZ01000001.1 Protein Homology CDS 331780 332412 . + 0 ID=cds-WP_000835257.1;Parent=gene-CCO53_RS01790;Dbxref=GenBank:WP_000835257.1;Name=WP_000835257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=CCO53_RS01790;product=YfdX family protein;protein_id=WP_000835257.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 333130 333711 . + . ID=gene-CCO53_RS01795;Name=CCO53_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01795;old_locus_tag=CCO53_01795 NZ_NPLZ01000001.1 Protein Homology CDS 333130 333711 . + 0 ID=cds-WP_080159977.1;Parent=gene-CCO53_RS01795;Dbxref=GenBank:WP_080159977.1;Name=WP_080159977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=CCO53_RS01795;product=fimbrial protein;protein_id=WP_080159977.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 333831 336320 . + . ID=gene-CCO53_RS01800;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=CCO53_RS01800;old_locus_tag=CCO53_01800 NZ_NPLZ01000001.1 Protein Homology CDS 333831 336320 . + 0 ID=cds-WP_094887533.1;Parent=gene-CCO53_RS01800;Dbxref=GenBank:WP_094887533.1;Name=WP_094887533.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=CCO53_RS01800;product=fimbrial outer membrane usher protein StdB;protein_id=WP_094887533.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 336361 337104 . + . ID=gene-CCO53_RS01805;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=CCO53_RS01805;old_locus_tag=CCO53_01805 NZ_NPLZ01000001.1 Protein Homology CDS 336361 337104 . + 0 ID=cds-WP_000798491.1;Parent=gene-CCO53_RS01805;Dbxref=GenBank:WP_000798491.1;Name=WP_000798491.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=CCO53_RS01805;product=fimbrial biogenesis chaperone StdC;protein_id=WP_000798491.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 337101 338168 . + . ID=gene-CCO53_RS01810;Name=CCO53_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01810;old_locus_tag=CCO53_01810 NZ_NPLZ01000001.1 Protein Homology CDS 337101 338168 . + 0 ID=cds-WP_080197766.1;Parent=gene-CCO53_RS01810;Dbxref=GenBank:WP_080197766.1;Name=WP_080197766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=CCO53_RS01810;product=fimbrial protein;protein_id=WP_080197766.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 338278 338784 . + . ID=gene-CCO53_RS01815;Name=CCO53_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01815;old_locus_tag=CCO53_01815 NZ_NPLZ01000001.1 Protein Homology CDS 338278 338784 . + 0 ID=cds-WP_000093333.1;Parent=gene-CCO53_RS01815;Dbxref=GenBank:WP_000093333.1;Name=WP_000093333.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=CCO53_RS01815;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000093333.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 338771 339529 . + . ID=gene-CCO53_RS01820;Name=CCO53_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01820;old_locus_tag=CCO53_01820 NZ_NPLZ01000001.1 Protein Homology CDS 338771 339529 . + 0 ID=cds-WP_079833695.1;Parent=gene-CCO53_RS01820;Dbxref=GenBank:WP_079833695.1;Name=WP_079833695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=CCO53_RS01820;product=transcriptional regulator;protein_id=WP_079833695.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 339744 340586 . - . ID=gene-CCO53_RS01825;Name=CCO53_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01825;old_locus_tag=CCO53_01825 NZ_NPLZ01000001.1 Protein Homology CDS 339744 340586 . - 0 ID=cds-WP_057527440.1;Parent=gene-CCO53_RS01825;Dbxref=GenBank:WP_057527440.1;Name=WP_057527440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=CCO53_RS01825;product=nickel/cobalt efflux protein RcnA;protein_id=WP_057527440.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 340708 340980 . + . ID=gene-CCO53_RS01830;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=CCO53_RS01830;old_locus_tag=CCO53_01830 NZ_NPLZ01000001.1 Protein Homology CDS 340708 340980 . + 0 ID=cds-WP_000019953.1;Parent=gene-CCO53_RS01830;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=CCO53_RS01830;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 341011 342240 . - . ID=gene-CCO53_RS01835;Name=CCO53_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01835;old_locus_tag=CCO53_01835 NZ_NPLZ01000001.1 Protein Homology CDS 341011 342240 . - 0 ID=cds-WP_000036843.1;Parent=gene-CCO53_RS01835;Dbxref=GenBank:WP_000036843.1;Name=WP_000036843.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=CCO53_RS01835;product=amino acid permease;protein_id=WP_000036843.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 342382 342837 . - . ID=gene-CCO53_RS01840;Name=CCO53_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01840;old_locus_tag=CCO53_01840 NZ_NPLZ01000001.1 Protein Homology CDS 342382 342837 . - 0 ID=cds-WP_001519547.1;Parent=gene-CCO53_RS01840;Dbxref=GenBank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=CCO53_RS01840;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 342941 343804 . + . ID=gene-CCO53_RS01845;Name=CCO53_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01845;old_locus_tag=CCO53_01845 NZ_NPLZ01000001.1 Protein Homology CDS 342941 343804 . + 0 ID=cds-WP_001270773.1;Parent=gene-CCO53_RS01845;Dbxref=GenBank:WP_001270773.1;Name=WP_001270773.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=CCO53_RS01845;product=LysR family transcriptional regulator;protein_id=WP_001270773.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 343927 345105 . + . ID=gene-CCO53_RS01850;Name=CCO53_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01850;old_locus_tag=CCO53_01850 NZ_NPLZ01000001.1 Protein Homology CDS 343927 345105 . + 0 ID=cds-WP_000665979.1;Parent=gene-CCO53_RS01850;Dbxref=GenBank:WP_000665979.1;Name=WP_000665979.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=CCO53_RS01850;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665979.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 345535 346371 . + . ID=gene-CCO53_RS01860;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=CCO53_RS01860;old_locus_tag=CCO53_01860 NZ_NPLZ01000001.1 Protein Homology CDS 345535 346371 . + 0 ID=cds-WP_000383276.1;Parent=gene-CCO53_RS01860;Dbxref=GenBank:WP_000383276.1;Name=WP_000383276.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=CCO53_RS01860;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383276.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 346428 347189 . + . ID=gene-CCO53_RS01865;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=CCO53_RS01865;old_locus_tag=CCO53_01865 NZ_NPLZ01000001.1 Protein Homology CDS 346428 347189 . + 0 ID=cds-WP_000602497.1;Parent=gene-CCO53_RS01865;Dbxref=GenBank:WP_000602497.1;Name=WP_000602497.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=CCO53_RS01865;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602497.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 347543 348961 . + . ID=gene-CCO53_RS01870;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=CCO53_RS01870;old_locus_tag=CCO53_01870 NZ_NPLZ01000001.1 Protein Homology CDS 347543 348961 . + 0 ID=cds-WP_000253650.1;Parent=gene-CCO53_RS01870;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=CCO53_RS01870;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 349074 349781 . + . ID=gene-CCO53_RS01875;Name=CCO53_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01875;old_locus_tag=CCO53_01875 NZ_NPLZ01000001.1 Protein Homology CDS 349074 349781 . + 0 ID=cds-WP_000848633.1;Parent=gene-CCO53_RS01875;Dbxref=GenBank:WP_000848633.1;Name=WP_000848633.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=CCO53_RS01875;product=aspartate/glutamate racemase;protein_id=WP_000848633.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 349753 350688 . - . ID=gene-CCO53_RS01880;Name=CCO53_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01880;old_locus_tag=CCO53_01880 NZ_NPLZ01000001.1 Protein Homology CDS 349753 350688 . - 0 ID=cds-WP_094887534.1;Parent=gene-CCO53_RS01880;Dbxref=GenBank:WP_094887534.1;Name=WP_094887534.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=CCO53_RS01880;product=LysR family transcriptional regulator;protein_id=WP_094887534.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 350806 352068 . + . ID=gene-CCO53_RS01885;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CCO53_RS01885;old_locus_tag=CCO53_01885 NZ_NPLZ01000001.1 Protein Homology CDS 350806 352068 . + 0 ID=cds-WP_000056599.1;Parent=gene-CCO53_RS01885;Dbxref=GenBank:WP_000056599.1;Name=WP_000056599.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=CCO53_RS01885;product=diaminopimelate decarboxylase;protein_id=WP_000056599.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 352078 353100 . - . ID=gene-CCO53_RS01890;Name=CCO53_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01890;old_locus_tag=CCO53_01890 NZ_NPLZ01000001.1 Protein Homology CDS 352078 353100 . - 0 ID=cds-WP_000968350.1;Parent=gene-CCO53_RS01890;Dbxref=GenBank:WP_000968350.1;Name=WP_000968350.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=CCO53_RS01890;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968350.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 353111 354139 . - . ID=gene-CCO53_RS01895;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=CCO53_RS01895;old_locus_tag=CCO53_01895 NZ_NPLZ01000001.1 Protein Homology CDS 353111 354139 . - 0 ID=cds-WP_000201030.1;Parent=gene-CCO53_RS01895;Dbxref=GenBank:WP_000201030.1;Name=WP_000201030.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=CCO53_RS01895;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201030.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 354347 354574 . + . ID=gene-CCO53_RS01900;Name=CCO53_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01900;old_locus_tag=CCO53_01900 NZ_NPLZ01000001.1 GeneMarkS-2+ CDS 354347 354574 . + 0 ID=cds-WP_071525129.1;Parent=gene-CCO53_RS01900;Dbxref=GenBank:WP_071525129.1;Name=WP_071525129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS01900;product=hypothetical protein;protein_id=WP_071525129.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 354731 356890 . + . ID=gene-CCO53_RS01905;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=CCO53_RS01905;old_locus_tag=CCO53_01905 NZ_NPLZ01000001.1 Protein Homology CDS 354731 356890 . + 0 ID=cds-WP_000896101.1;Parent=gene-CCO53_RS01905;Dbxref=GenBank:WP_000896101.1;Name=WP_000896101.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=CCO53_RS01905;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896101.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 356883 358085 . + . ID=gene-CCO53_RS01910;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=CCO53_RS01910;old_locus_tag=CCO53_01910 NZ_NPLZ01000001.1 Protein Homology CDS 356883 358085 . + 0 ID=cds-WP_000004686.1;Parent=gene-CCO53_RS01910;Dbxref=GenBank:WP_000004686.1;Name=WP_000004686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=CCO53_RS01910;product=lysophospholipid transporter LplT;protein_id=WP_000004686.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 358172 359212 . - . ID=gene-CCO53_RS01915;Name=CCO53_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01915;old_locus_tag=CCO53_01915 NZ_NPLZ01000001.1 Protein Homology CDS 358172 359212 . - 0 ID=cds-WP_000558960.1;Parent=gene-CCO53_RS01915;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=CCO53_RS01915;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 359403 359621 . - . ID=gene-CCO53_RS01920;Name=CCO53_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01920;old_locus_tag=CCO53_01920 NZ_NPLZ01000001.1 Protein Homology CDS 359403 359621 . - 0 ID=cds-WP_000758662.1;Parent=gene-CCO53_RS01920;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=CCO53_RS01920;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 359791 360504 . - . ID=gene-CCO53_RS01925;Name=CCO53_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01925;old_locus_tag=CCO53_01925 NZ_NPLZ01000001.1 Protein Homology CDS 359791 360504 . - 0 ID=cds-WP_000895635.1;Parent=gene-CCO53_RS01925;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=CCO53_RS01925;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 360686 361381 . - . ID=gene-CCO53_RS01930;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=CCO53_RS01930;old_locus_tag=CCO53_01930 NZ_NPLZ01000001.1 Protein Homology CDS 360686 361381 . - 0 ID=cds-WP_001274930.1;Parent=gene-CCO53_RS01930;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=CCO53_RS01930;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 361567 361713 . + . ID=gene-CCO53_RS24185;Name=CCO53_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24185 NZ_NPLZ01000001.1 Protein Homology CDS 361567 361713 . + 0 ID=cds-WP_031614140.1;Parent=gene-CCO53_RS24185;Dbxref=GenBank:WP_031614140.1;Name=WP_031614140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502650.1;locus_tag=CCO53_RS24185;product=hypothetical protein;protein_id=WP_031614140.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 362064 362594 . + . ID=gene-CCO53_RS01935;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=CCO53_RS01935;old_locus_tag=CCO53_01935 NZ_NPLZ01000001.1 Protein Homology CDS 362064 362594 . + 0 ID=cds-WP_000564481.1;Parent=gene-CCO53_RS01935;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=CCO53_RS01935;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 362607 364853 . + . ID=gene-CCO53_RS01940;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO53_RS01940;old_locus_tag=CCO53_01940 NZ_NPLZ01000001.1 Protein Homology CDS 362607 364853 . + 0 ID=cds-WP_000957888.1;Parent=gene-CCO53_RS01940;Dbxref=GenBank:WP_000957888.1;Name=WP_000957888.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=CCO53_RS01940;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957888.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 365069 365944 . + . ID=gene-CCO53_RS01945;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CCO53_RS01945;old_locus_tag=CCO53_01945 NZ_NPLZ01000001.1 Protein Homology CDS 365069 365944 . + 0 ID=cds-WP_000204645.1;Parent=gene-CCO53_RS01945;Dbxref=GenBank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=CCO53_RS01945;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 365951 366745 . + . ID=gene-CCO53_RS01950;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=CCO53_RS01950;old_locus_tag=CCO53_01950 NZ_NPLZ01000001.1 Protein Homology CDS 365951 366745 . + 0 ID=cds-WP_000816247.1;Parent=gene-CCO53_RS01950;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=CCO53_RS01950;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 366930 367400 . + . ID=gene-CCO53_RS01960;Name=CCO53_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01960;old_locus_tag=CCO53_01960 NZ_NPLZ01000001.1 Protein Homology CDS 366930 367400 . + 0 ID=cds-WP_000744668.1;Parent=gene-CCO53_RS01960;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=CCO53_RS01960;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 367391 367954 . + . ID=gene-CCO53_RS01965;Name=CCO53_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01965;old_locus_tag=CCO53_01965 NZ_NPLZ01000001.1 Protein Homology CDS 367391 367954 . + 0 ID=cds-WP_000029150.1;Parent=gene-CCO53_RS01965;Dbxref=GenBank:WP_000029150.1;Name=WP_000029150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=CCO53_RS01965;product=prepilin peptidase-dependent protein;protein_id=WP_000029150.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 367951 368358 . + . ID=gene-CCO53_RS01970;Name=CCO53_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01970;old_locus_tag=CCO53_01970 NZ_NPLZ01000001.1 Protein Homology CDS 367951 368358 . + 0 ID=cds-WP_001078535.1;Parent=gene-CCO53_RS01970;Dbxref=GenBank:WP_001078535.1;Name=WP_001078535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=CCO53_RS01970;product=DUF2509 family protein;protein_id=WP_001078535.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 368343 368663 . + . ID=gene-CCO53_RS01975;Name=CCO53_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS01975;old_locus_tag=CCO53_01975 NZ_NPLZ01000001.1 Protein Homology CDS 368343 368663 . + 0 ID=cds-WP_000019283.1;Parent=gene-CCO53_RS01975;Dbxref=GenBank:WP_000019283.1;Name=WP_000019283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=CCO53_RS01975;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019283.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 368679 372050 . + . ID=gene-CCO53_RS01980;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=CCO53_RS01980;old_locus_tag=CCO53_01980 NZ_NPLZ01000001.1 Protein Homology CDS 368679 372050 . + 0 ID=cds-WP_094887535.1;Parent=gene-CCO53_RS01980;Dbxref=GenBank:WP_094887535.1;Name=WP_094887535.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=CCO53_RS01980;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_094887535.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 372228 375116 . + . ID=gene-CCO53_RS01985;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=CCO53_RS01985;old_locus_tag=CCO53_01985 NZ_NPLZ01000001.1 Protein Homology CDS 372228 375116 . + 0 ID=cds-WP_094887536.1;Parent=gene-CCO53_RS01985;Dbxref=GenBank:WP_094887536.1;Name=WP_094887536.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=CCO53_RS01985;product=pitrilysin;protein_id=WP_094887536.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 375109 378654 . + . ID=gene-CCO53_RS01990;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=CCO53_RS01990;old_locus_tag=CCO53_01990 NZ_NPLZ01000001.1 Protein Homology CDS 375109 378654 . + 0 ID=cds-WP_058331855.1;Parent=gene-CCO53_RS01990;Dbxref=GenBank:WP_058331855.1;Name=WP_058331855.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=CCO53_RS01990;product=exodeoxyribonuclease V subunit beta;protein_id=WP_058331855.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 378651 380486 . + . ID=gene-CCO53_RS01995;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=CCO53_RS01995;old_locus_tag=CCO53_01995 NZ_NPLZ01000001.1 Protein Homology CDS 378651 380486 . + 0 ID=cds-WP_064043403.1;Parent=gene-CCO53_RS01995;Dbxref=GenBank:WP_064043403.1;Name=WP_064043403.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=CCO53_RS01995;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_064043403.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 380589 381920 . - . ID=gene-CCO53_RS02000;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=CCO53_RS02000;old_locus_tag=CCO53_02000 NZ_NPLZ01000001.1 Protein Homology CDS 380589 381920 . - 0 ID=cds-WP_000588964.1;Parent=gene-CCO53_RS02000;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=CCO53_RS02000;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 382153 383406 . + . ID=gene-CCO53_RS02005;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=CCO53_RS02005;old_locus_tag=CCO53_02005 NZ_NPLZ01000001.1 Protein Homology CDS 382153 383406 . + 0 ID=cds-WP_000011919.1;Parent=gene-CCO53_RS02005;Dbxref=GenBank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=CCO53_RS02005;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 383516 383592 . - . ID=gene-CCO53_RS02010;Name=CCO53_RS02010;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS02010;old_locus_tag=CCO53_02010 NZ_NPLZ01000001.1 tRNAscan-SE tRNA 383516 383592 . - . ID=rna-CCO53_RS02010;Parent=gene-CCO53_RS02010;anticodon=(pos:complement(383556..383558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS02010;product=tRNA-Met NZ_NPLZ01000001.1 tRNAscan-SE exon 383516 383592 . - . ID=exon-CCO53_RS02010-1;Parent=rna-CCO53_RS02010;anticodon=(pos:complement(383556..383558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS02010;product=tRNA-Met NZ_NPLZ01000001.1 RefSeq gene 383800 384897 . + . ID=gene-CCO53_RS02015;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=CCO53_RS02015;old_locus_tag=CCO53_02015 NZ_NPLZ01000001.1 Protein Homology CDS 383800 384897 . + 0 ID=cds-WP_000678626.1;Parent=gene-CCO53_RS02015;Dbxref=GenBank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=CCO53_RS02015;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 385007 385813 . + . ID=gene-CCO53_RS02020;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=CCO53_RS02020;old_locus_tag=CCO53_02020 NZ_NPLZ01000001.1 Protein Homology CDS 385007 385813 . + 0 ID=cds-WP_000117748.1;Parent=gene-CCO53_RS02020;Dbxref=GenBank:WP_000117748.1;Name=WP_000117748.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=CCO53_RS02020;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117748.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 385865 386752 . - . ID=gene-CCO53_RS02025;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO53_RS02025;old_locus_tag=CCO53_02025 NZ_NPLZ01000001.1 Protein Homology CDS 385865 386752 . - 0 ID=cds-WP_077944722.1;Parent=gene-CCO53_RS02025;Dbxref=GenBank:WP_077944722.1;Name=WP_077944722.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=CCO53_RS02025;product=EamA family transporter RarD;protein_id=WP_077944722.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 387052 387495 . - . ID=gene-CCO53_RS02030;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=CCO53_RS02030;old_locus_tag=CCO53_02030 NZ_NPLZ01000001.1 Protein Homology CDS 387052 387495 . - 0 ID=cds-WP_000184198.1;Parent=gene-CCO53_RS02030;Dbxref=GenBank:WP_000184198.1;Name=WP_000184198.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=CCO53_RS02030;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184198.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 387495 388700 . - . ID=gene-CCO53_RS02035;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=CCO53_RS02035;old_locus_tag=CCO53_02035 NZ_NPLZ01000001.1 Protein Homology CDS 387495 388700 . - 0 ID=cds-WP_000991053.1;Parent=gene-CCO53_RS02035;Dbxref=GenBank:WP_000991053.1;Name=WP_000991053.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=CCO53_RS02035;product=cysteine desulfurase CsdA;protein_id=WP_000991053.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 388893 389120 . + . ID=gene-CCO53_RS02040;Name=CCO53_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02040;old_locus_tag=CCO53_02040 NZ_NPLZ01000001.1 Protein Homology CDS 388893 389120 . + 0 ID=cds-WP_000750393.1;Parent=gene-CCO53_RS02040;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=CCO53_RS02040;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 389467 390384 . + . ID=gene-CCO53_RS02045;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=CCO53_RS02045;old_locus_tag=CCO53_02045 NZ_NPLZ01000001.1 Protein Homology CDS 389467 390384 . + 0 ID=cds-WP_000044409.1;Parent=gene-CCO53_RS02045;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=CCO53_RS02045;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 390403 390798 . + . ID=gene-CCO53_RS02050;Name=CCO53_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02050;old_locus_tag=CCO53_02050 NZ_NPLZ01000001.1 Protein Homology CDS 390403 390798 . + 0 ID=cds-WP_000203913.1;Parent=gene-CCO53_RS02050;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=CCO53_RS02050;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 390791 391891 . + . ID=gene-CCO53_RS02055;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=CCO53_RS02055;old_locus_tag=CCO53_02055 NZ_NPLZ01000001.1 Protein Homology CDS 390791 391891 . + 0 ID=cds-WP_094887537.1;Parent=gene-CCO53_RS02055;Dbxref=GenBank:WP_094887537.1;Name=WP_094887537.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=CCO53_RS02055;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_094887537.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 391950 392660 . - . ID=gene-CCO53_RS02060;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=CCO53_RS02060;old_locus_tag=CCO53_02060 NZ_NPLZ01000001.1 Protein Homology CDS 391950 392660 . - 0 ID=cds-WP_000642330.1;Parent=gene-CCO53_RS02060;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=CCO53_RS02060;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 392718 393140 . - . ID=gene-CCO53_RS02065;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=CCO53_RS02065;old_locus_tag=CCO53_02065 NZ_NPLZ01000001.1 Protein Homology CDS 392718 393140 . - 0 ID=cds-WP_023201478.1;Parent=gene-CCO53_RS02065;Dbxref=GenBank:WP_023201478.1;Name=WP_023201478.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=CCO53_RS02065;product=L-fucose mutarotase;protein_id=WP_023201478.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 393142 394560 . - . ID=gene-CCO53_RS02070;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=CCO53_RS02070;old_locus_tag=CCO53_02070 NZ_NPLZ01000001.1 Protein Homology CDS 393142 394560 . - 0 ID=cds-WP_094887538.1;Parent=gene-CCO53_RS02070;Dbxref=GenBank:WP_094887538.1;Name=WP_094887538.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=CCO53_RS02070;product=L-fuculokinase;protein_id=WP_094887538.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 394661 396436 . - . ID=gene-CCO53_RS02075;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=CCO53_RS02075;old_locus_tag=CCO53_02075 NZ_NPLZ01000001.1 Protein Homology CDS 394661 396436 . - 0 ID=cds-WP_000724134.1;Parent=gene-CCO53_RS02075;Dbxref=GenBank:WP_000724134.1;Name=WP_000724134.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=CCO53_RS02075;product=L-fucose isomerase;protein_id=WP_000724134.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 396468 397784 . - . ID=gene-CCO53_RS02080;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO53_RS02080;old_locus_tag=CCO53_02080 NZ_NPLZ01000001.1 Protein Homology CDS 396468 397784 . - 0 ID=cds-WP_000528622.1;Parent=gene-CCO53_RS02080;Dbxref=GenBank:WP_000528622.1;Name=WP_000528622.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=CCO53_RS02080;product=L-fucose:H+ symporter permease;protein_id=WP_000528622.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 398340 398987 . + . ID=gene-CCO53_RS02085;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=CCO53_RS02085;old_locus_tag=CCO53_02085 NZ_NPLZ01000001.1 Protein Homology CDS 398340 398987 . + 0 ID=cds-WP_000440828.1;Parent=gene-CCO53_RS02085;Dbxref=GenBank:WP_000440828.1;Name=WP_000440828.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=CCO53_RS02085;product=L-fuculose-phosphate aldolase;protein_id=WP_000440828.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 399004 400152 . + . ID=gene-CCO53_RS02090;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO53_RS02090;old_locus_tag=CCO53_02090 NZ_NPLZ01000001.1 Protein Homology CDS 399004 400152 . + 0 ID=cds-WP_000013562.1;Parent=gene-CCO53_RS02090;Dbxref=GenBank:WP_000013562.1;Name=WP_000013562.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=CCO53_RS02090;product=lactaldehyde reductase;protein_id=WP_000013562.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 400244 400999 . - . ID=gene-CCO53_RS02095;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=CCO53_RS02095;old_locus_tag=CCO53_02095 NZ_NPLZ01000001.1 Protein Homology CDS 400244 400999 . - 0 ID=cds-WP_023201479.1;Parent=gene-CCO53_RS02095;Dbxref=GenBank:WP_023201479.1;Name=WP_023201479.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=CCO53_RS02095;product=flap endonuclease Xni;protein_id=WP_023201479.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 401170 402537 . - . ID=gene-CCO53_RS02105;Name=CCO53_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02105;old_locus_tag=CCO53_02105 NZ_NPLZ01000001.1 Protein Homology CDS 401170 402537 . - 0 ID=cds-WP_000626392.1;Parent=gene-CCO53_RS02105;Dbxref=GenBank:WP_000626392.1;Name=WP_000626392.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=CCO53_RS02105;product=L-serine ammonia-lyase;protein_id=WP_000626392.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 402596 403885 . - . ID=gene-CCO53_RS02110;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=CCO53_RS02110;old_locus_tag=CCO53_02110 NZ_NPLZ01000001.1 Protein Homology CDS 402596 403885 . - 0 ID=cds-WP_000450462.1;Parent=gene-CCO53_RS02110;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=CCO53_RS02110;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 404450 405814 . - . ID=gene-CCO53_RS02115;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=CCO53_RS02115;old_locus_tag=CCO53_02115 NZ_NPLZ01000001.1 Protein Homology CDS 404450 405814 . - 0 ID=cds-WP_000627973.1;Parent=gene-CCO53_RS02115;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=CCO53_RS02115;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 405927 406775 . - . ID=gene-CCO53_RS02120;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CCO53_RS02120;old_locus_tag=CCO53_02120 NZ_NPLZ01000001.1 Protein Homology CDS 405927 406775 . - 0 ID=cds-WP_094887539.1;Parent=gene-CCO53_RS02120;Dbxref=GenBank:WP_094887539.1;Name=WP_094887539.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=CCO53_RS02120;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_094887539.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 406844 407389 . + . ID=gene-CCO53_RS02125;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=CCO53_RS02125;old_locus_tag=CCO53_02125 NZ_NPLZ01000001.1 Protein Homology CDS 406844 407389 . + 0 ID=cds-WP_000343990.1;Parent=gene-CCO53_RS02125;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=CCO53_RS02125;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 408001 408330 . + . ID=gene-CCO53_RS02135;Name=CCO53_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02135;old_locus_tag=CCO53_02135 NZ_NPLZ01000001.1 Protein Homology CDS 408001 408330 . + 0 ID=cds-WP_001522911.1;Parent=gene-CCO53_RS02135;Dbxref=GenBank:WP_001522911.1;Name=WP_001522911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=CCO53_RS02135;product=YqcC family protein;protein_id=WP_001522911.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 408330 409112 . + . ID=gene-CCO53_RS02140;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=CCO53_RS02140;old_locus_tag=CCO53_02140 NZ_NPLZ01000001.1 Protein Homology CDS 408330 409112 . + 0 ID=cds-WP_000890028.1;Parent=gene-CCO53_RS02140;Dbxref=GenBank:WP_000890028.1;Name=WP_000890028.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=CCO53_RS02140;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890028.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 409131 409580 . + . ID=gene-CCO53_RS02145;Name=CCO53_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02145;old_locus_tag=CCO53_02145 NZ_NPLZ01000001.1 Protein Homology CDS 409131 409580 . + 0 ID=cds-WP_000807738.1;Parent=gene-CCO53_RS02145;Dbxref=GenBank:WP_000807738.1;Name=WP_000807738.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=CCO53_RS02145;product=flavodoxin;protein_id=WP_000807738.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 409730 409978 . - . ID=gene-CCO53_RS02150;Name=CCO53_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02150;old_locus_tag=CCO53_02150 NZ_NPLZ01000001.1 GeneMarkS-2+ CDS 409730 409978 . - 0 ID=cds-WP_001531815.1;Parent=gene-CCO53_RS02150;Dbxref=GenBank:WP_001531815.1;Name=WP_001531815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS02150;product=hypothetical protein;protein_id=WP_001531815.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 410061 411419 . + . ID=gene-CCO53_RS02155;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=CCO53_RS02155;old_locus_tag=CCO53_02155 NZ_NPLZ01000001.1 Protein Homology CDS 410061 411419 . + 0 ID=cds-WP_000097015.1;Parent=gene-CCO53_RS02155;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=CCO53_RS02155;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 411416 412756 . + . ID=gene-CCO53_RS02160;Name=CCO53_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02160;old_locus_tag=CCO53_02160 NZ_NPLZ01000001.1 Protein Homology CDS 411416 412756 . + 0 ID=cds-WP_000211806.1;Parent=gene-CCO53_RS02160;Dbxref=GenBank:WP_000211806.1;Name=WP_000211806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=CCO53_RS02160;product=enolase C-terminal domain-like protein;protein_id=WP_000211806.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 412777 414117 . + . ID=gene-CCO53_RS02165;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=CCO53_RS02165;old_locus_tag=CCO53_02165 NZ_NPLZ01000001.1 Protein Homology CDS 412777 414117 . + 0 ID=cds-WP_000107113.1;Parent=gene-CCO53_RS02165;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=CCO53_RS02165;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 414195 415337 . + . ID=gene-CCO53_RS02170;Name=CCO53_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02170;old_locus_tag=CCO53_02170 NZ_NPLZ01000001.1 Protein Homology CDS 414195 415337 . + 0 ID=cds-WP_000706477.1;Parent=gene-CCO53_RS02170;Dbxref=GenBank:WP_000706477.1;Name=WP_000706477.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=CCO53_RS02170;product=glycerate kinase;protein_id=WP_000706477.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 415381 418137 . - . ID=gene-CCO53_RS02175;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=CCO53_RS02175;old_locus_tag=CCO53_02175 NZ_NPLZ01000001.1 Protein Homology CDS 415381 418137 . - 0 ID=cds-WP_000186400.1;Parent=gene-CCO53_RS02175;Dbxref=GenBank:WP_000186400.1;Name=WP_000186400.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=CCO53_RS02175;product=two-component sensor histidine kinase BarA;protein_id=WP_000186400.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 418195 419490 . + . ID=gene-CCO53_RS02180;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CCO53_RS02180;old_locus_tag=CCO53_02180 NZ_NPLZ01000001.1 Protein Homology CDS 418195 419490 . + 0 ID=cds-WP_058331859.1;Parent=gene-CCO53_RS02180;Dbxref=GenBank:WP_058331859.1;Name=WP_058331859.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=CCO53_RS02180;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_058331859.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 419542 421776 . + . ID=gene-CCO53_RS02185;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=CCO53_RS02185;old_locus_tag=CCO53_02185 NZ_NPLZ01000001.1 Protein Homology CDS 419542 421776 . + 0 ID=cds-WP_000226841.1;Parent=gene-CCO53_RS02185;Dbxref=GenBank:WP_000226841.1;Name=WP_000226841.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=CCO53_RS02185;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 421860 422216 . + . ID=gene-CCO53_RS02190;Name=CCO53_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02190;old_locus_tag=CCO53_02190 NZ_NPLZ01000001.1 Protein Homology CDS 421860 422216 . + 0 ID=cds-WP_000480218.1;Parent=gene-CCO53_RS02190;Dbxref=GenBank:WP_000480218.1;Name=WP_000480218.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=CCO53_RS02190;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_000480218.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 422182 422478 . + . ID=gene-CCO53_RS02195;Name=CCO53_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02195;old_locus_tag=CCO53_02195 NZ_NPLZ01000001.1 Protein Homology CDS 422182 422478 . + 0 ID=cds-WP_015633101.1;Parent=gene-CCO53_RS02195;Dbxref=GenBank:WP_015633101.1;Name=WP_015633101.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=CCO53_RS02195;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_015633101.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 422925 423917 . - . ID=gene-CCO53_RS23595;Name=CCO53_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23595 NZ_NPLZ01000001.1 GeneMarkS-2+ CDS 422925 423917 . - 0 ID=cds-WP_015633100.1;Parent=gene-CCO53_RS23595;Dbxref=GenBank:WP_015633100.1;Name=WP_015633100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS23595;product=hypothetical protein;protein_id=WP_015633100.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 424047 424583 . - . ID=gene-CCO53_RS02205;Name=CCO53_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02205;old_locus_tag=CCO53_02205 NZ_NPLZ01000001.1 Protein Homology CDS 424047 424583 . - 0 ID=cds-WP_001079649.1;Parent=gene-CCO53_RS02205;Dbxref=GenBank:WP_001079649.1;Name=WP_001079649.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=CCO53_RS02205;product=fimbrial protein;protein_id=WP_001079649.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 424580 425050 . - . ID=gene-CCO53_RS02210;Name=CCO53_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02210;old_locus_tag=CCO53_02210 NZ_NPLZ01000001.1 Protein Homology CDS 424580 425050 . - 0 ID=cds-WP_000832397.1;Parent=gene-CCO53_RS02210;Dbxref=GenBank:WP_000832397.1;Name=WP_000832397.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=CCO53_RS02210;product=fimbrial protein;protein_id=WP_000832397.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 425065 425571 . - . ID=gene-CCO53_RS02215;Name=CCO53_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02215;old_locus_tag=CCO53_02215 NZ_NPLZ01000001.1 Protein Homology CDS 425065 425571 . - 0 ID=cds-WP_000178257.1;Parent=gene-CCO53_RS02215;Dbxref=GenBank:WP_000178257.1;Name=WP_000178257.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=CCO53_RS02215;product=fimbrial protein;protein_id=WP_000178257.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 425591 426364 . - . ID=gene-CCO53_RS02220;Name=CCO53_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02220;old_locus_tag=CCO53_02220 NZ_NPLZ01000001.1 Protein Homology CDS 425591 426364 . - 0 ID=cds-WP_001044458.1;Parent=gene-CCO53_RS02220;Dbxref=GenBank:WP_001044458.1;Name=WP_001044458.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=CCO53_RS02220;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001044458.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 426377 429073 . - . ID=gene-CCO53_RS02225;Name=CCO53_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02225;old_locus_tag=CCO53_02225 NZ_NPLZ01000001.1 Protein Homology CDS 426377 429073 . - 0 ID=cds-WP_071818056.1;Parent=gene-CCO53_RS02225;Dbxref=GenBank:WP_071818056.1;Name=WP_071818056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=CCO53_RS02225;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_071818056.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 429156 429743 . - . ID=gene-CCO53_RS02230;Name=CCO53_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02230;old_locus_tag=CCO53_02230 NZ_NPLZ01000001.1 Protein Homology CDS 429156 429743 . - 0 ID=cds-WP_094887540.1;Parent=gene-CCO53_RS02230;Dbxref=GenBank:WP_094887540.1;Name=WP_094887540.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=CCO53_RS02230;product=fimbrial protein;protein_id=WP_094887540.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 430352 431152 . + . ID=gene-CCO53_RS02235;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=CCO53_RS02235;old_locus_tag=CCO53_02235 NZ_NPLZ01000001.1 Protein Homology CDS 430352 431152 . + 0 ID=cds-WP_000210454.1;Parent=gene-CCO53_RS02235;Dbxref=GenBank:WP_000210454.1;Name=WP_000210454.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=CCO53_RS02235;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210454.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 431380 433017 . + . ID=gene-CCO53_RS02240;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CCO53_RS02240;old_locus_tag=CCO53_02240 NZ_NPLZ01000001.1 Protein Homology CDS 431380 433017 . + 0 ID=cds-WP_000210863.1;Parent=gene-CCO53_RS02240;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=CCO53_RS02240;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 433100 434398 . + . ID=gene-CCO53_RS02245;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CCO53_RS02245;old_locus_tag=CCO53_02245 NZ_NPLZ01000001.1 Protein Homology CDS 433100 434398 . + 0 ID=cds-WP_000036734.1;Parent=gene-CCO53_RS02245;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=CCO53_RS02245;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 434534 435205 . + . ID=gene-CCO53_RS02250;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CCO53_RS02250;old_locus_tag=CCO53_02250 NZ_NPLZ01000001.1 Protein Homology CDS 434534 435205 . + 0 ID=cds-WP_001199961.1;Parent=gene-CCO53_RS02250;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=CCO53_RS02250;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq direct_repeat 435502 438402 . + . ID=id-NZ_NPLZ01000001.1:435502..438402;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=435502..435530;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_NPLZ01000001.1 RefSeq gene 438501 439298 . + . ID=gene-CCO53_RS02255;Name=CCO53_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02255;old_locus_tag=CCO53_02255 NZ_NPLZ01000001.1 Protein Homology CDS 438501 439298 . + 0 ID=cds-WP_023201486.1;Parent=gene-CCO53_RS02255;Dbxref=GenBank:WP_023201486.1;Name=WP_023201486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=CCO53_RS02255;product=MBL fold metallo-hydrolase;protein_id=WP_023201486.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 439388 439750 . - . ID=gene-CCO53_RS02260;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CCO53_RS02260;old_locus_tag=CCO53_02260 NZ_NPLZ01000001.1 Protein Homology CDS 439388 439750 . - 0 ID=cds-WP_000108313.1;Parent=gene-CCO53_RS02260;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=CCO53_RS02260;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 440174 441973 . + . ID=gene-CCO53_RS02270;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=CCO53_RS02270;old_locus_tag=CCO53_02270 NZ_NPLZ01000001.1 Protein Homology CDS 440174 441973 . + 0 ID=cds-WP_080160172.1;Parent=gene-CCO53_RS02270;Dbxref=GenBank:WP_080160172.1;Name=WP_080160172.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=CCO53_RS02270;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_080160172.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 441973 443685 . + . ID=gene-CCO53_RS02275;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=CCO53_RS02275;old_locus_tag=CCO53_02275 NZ_NPLZ01000001.1 Protein Homology CDS 441973 443685 . + 0 ID=cds-WP_058331999.1;Parent=gene-CCO53_RS02275;Dbxref=GenBank:WP_058331999.1;Name=WP_058331999.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=CCO53_RS02275;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_058331999.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 443761 444495 . + . ID=gene-CCO53_RS02285;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=CCO53_RS02285;old_locus_tag=CCO53_02285 NZ_NPLZ01000001.1 Protein Homology CDS 443761 444495 . + 0 ID=cds-WP_023136478.1;Parent=gene-CCO53_RS02285;Dbxref=GenBank:WP_023136478.1;Name=WP_023136478.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=CCO53_RS02285;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_023136478.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 444583 445536 . - . ID=gene-CCO53_RS02290;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=CCO53_RS02290;old_locus_tag=CCO53_02290 NZ_NPLZ01000001.1 Protein Homology CDS 444583 445536 . - 0 ID=cds-WP_024146070.1;Parent=gene-CCO53_RS02290;Dbxref=GenBank:WP_024146070.1;Name=WP_024146070.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=CCO53_RS02290;product=SPI-1 type III secretion system effector SopD;protein_id=WP_024146070.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 445980 448643 . + . ID=gene-CCO53_RS02295;Name=CCO53_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02295;old_locus_tag=CCO53_02295 NZ_NPLZ01000001.1 Protein Homology CDS 445980 448643 . + 0 ID=cds-WP_094887541.1;Parent=gene-CCO53_RS02295;Dbxref=GenBank:WP_094887541.1;Name=WP_094887541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=CCO53_RS02295;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_094887541.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 448655 450211 . + . ID=gene-CCO53_RS02300;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=CCO53_RS02300;old_locus_tag=CCO53_02300 NZ_NPLZ01000001.1 Protein Homology CDS 448655 450211 . + 0 ID=cds-WP_058332001.1;Parent=gene-CCO53_RS02300;Dbxref=GenBank:WP_058332001.1;Name=WP_058332001.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=CCO53_RS02300;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_058332001.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 450208 450756 . + . ID=gene-CCO53_RS02305;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=CCO53_RS02305;old_locus_tag=CCO53_02305 NZ_NPLZ01000001.1 Protein Homology CDS 450208 450756 . + 0 ID=cds-WP_058332002.1;Parent=gene-CCO53_RS02305;Dbxref=GenBank:WP_058332002.1;Name=WP_058332002.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117945.1;locus_tag=CCO53_RS02305;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_058332002.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 450770 451828 . + . ID=gene-CCO53_RS02310;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=CCO53_RS02310;old_locus_tag=CCO53_02310 NZ_NPLZ01000001.1 Protein Homology CDS 450770 451828 . + 0 ID=cds-WP_001591403.1;Parent=gene-CCO53_RS02310;Dbxref=GenBank:WP_001591403.1;Name=WP_001591403.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=CCO53_RS02310;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_001591403.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 451839 452585 . + . ID=gene-CCO53_RS02315;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=CCO53_RS02315;old_locus_tag=CCO53_02315 NZ_NPLZ01000001.1 Protein Homology CDS 451839 452585 . + 0 ID=cds-WP_080250564.1;Parent=gene-CCO53_RS02315;Dbxref=GenBank:WP_080250564.1;Name=WP_080250564.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=CCO53_RS02315;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_080250564.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 452567 453217 . + . ID=gene-CCO53_RS02320;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=CCO53_RS02320;old_locus_tag=CCO53_02320 NZ_NPLZ01000001.1 Protein Homology CDS 452567 453217 . + 0 ID=cds-WP_094887542.1;Parent=gene-CCO53_RS02320;Dbxref=GenBank:WP_094887542.1;Name=WP_094887542.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=CCO53_RS02320;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_094887542.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 453214 454134 . + . ID=gene-CCO53_RS02325;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=CCO53_RS02325;old_locus_tag=CCO53_02325 NZ_NPLZ01000001.1 Protein Homology CDS 453214 454134 . + 0 ID=cds-WP_000144832.1;Parent=gene-CCO53_RS02325;Dbxref=GenBank:WP_000144832.1;Name=WP_000144832.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=CCO53_RS02325;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144832.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 454134 454427 . + . ID=gene-CCO53_RS02330;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=CCO53_RS02330;old_locus_tag=CCO53_02330 NZ_NPLZ01000001.1 Protein Homology CDS 454134 454427 . + 0 ID=cds-WP_001518648.1;Parent=gene-CCO53_RS02330;Dbxref=GenBank:WP_001518648.1;Name=WP_001518648.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=CCO53_RS02330;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_001518648.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq direct_repeat 454524 457075 . + . ID=id-NZ_NPLZ01000001.1:454524..457075;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=454524..454552;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_NPLZ01000001.1 RefSeq gene 457090 458136 . - . ID=gene-CCO53_RS02335;Name=CCO53_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02335;old_locus_tag=CCO53_02335 NZ_NPLZ01000001.1 Protein Homology CDS 457090 458136 . - 0 ID=cds-WP_000490481.1;Parent=gene-CCO53_RS02335;Dbxref=GenBank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=CCO53_RS02335;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 458387 459295 . + . ID=gene-CCO53_RS02340;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=CCO53_RS02340;old_locus_tag=CCO53_02340 NZ_NPLZ01000001.1 Protein Homology CDS 458387 459295 . + 0 ID=cds-WP_000372384.1;Parent=gene-CCO53_RS02340;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=CCO53_RS02340;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 459305 460744 . + . ID=gene-CCO53_RS02345;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=CCO53_RS02345;old_locus_tag=CCO53_02345 NZ_NPLZ01000001.1 Protein Homology CDS 459305 460744 . + 0 ID=cds-WP_001092269.1;Parent=gene-CCO53_RS02345;Dbxref=GenBank:WP_001092269.1;Name=WP_001092269.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=CCO53_RS02345;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001092269.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 460731 461336 . + . ID=gene-CCO53_RS02350;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=CCO53_RS02350;old_locus_tag=CCO53_02350 NZ_NPLZ01000001.1 Protein Homology CDS 460731 461336 . + 0 ID=cds-WP_001173663.1;Parent=gene-CCO53_RS02350;Dbxref=GenBank:WP_001173663.1;Name=WP_001173663.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=CCO53_RS02350;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 461387 461710 . + . ID=gene-CCO53_RS02355;Name=CCO53_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02355;old_locus_tag=CCO53_02355 NZ_NPLZ01000001.1 Protein Homology CDS 461387 461710 . + 0 ID=cds-WP_001537530.1;Parent=gene-CCO53_RS02355;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=CCO53_RS02355;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 461901 462212 . + . ID=gene-CCO53_RS02360;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=CCO53_RS02360;old_locus_tag=CCO53_02360 NZ_NPLZ01000001.1 Protein Homology CDS 461901 462212 . + 0 ID=cds-WP_000517480.1;Parent=gene-CCO53_RS02360;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=CCO53_RS02360;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 462231 462941 . + . ID=gene-CCO53_RS02365;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CCO53_RS02365;old_locus_tag=CCO53_02365 NZ_NPLZ01000001.1 Protein Homology CDS 462231 462941 . + 0 ID=cds-WP_000741653.1;Parent=gene-CCO53_RS02365;Dbxref=GenBank:WP_000741653.1;Name=WP_000741653.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=CCO53_RS02365;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741653.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 462941 463420 . + . ID=gene-CCO53_RS02370;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CCO53_RS02370;old_locus_tag=CCO53_02370 NZ_NPLZ01000001.1 Protein Homology CDS 462941 463420 . + 0 ID=cds-WP_001219244.1;Parent=gene-CCO53_RS02370;Dbxref=GenBank:WP_001219244.1;Name=WP_001219244.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=CCO53_RS02370;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219244.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 463417 464466 . + . ID=gene-CCO53_RS02375;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=CCO53_RS02375;old_locus_tag=CCO53_02375 NZ_NPLZ01000001.1 Protein Homology CDS 463417 464466 . + 0 ID=cds-WP_000134246.1;Parent=gene-CCO53_RS02375;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=CCO53_RS02375;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 464447 465208 . + . ID=gene-CCO53_RS02380;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=CCO53_RS02380;old_locus_tag=CCO53_02380 NZ_NPLZ01000001.1 Protein Homology CDS 464447 465208 . + 0 ID=cds-WP_094887543.1;Parent=gene-CCO53_RS02380;Dbxref=GenBank:WP_094887543.1;Name=WP_094887543.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=CCO53_RS02380;product=5'/3'-nucleotidase SurE;protein_id=WP_094887543.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 465202 465828 . + . ID=gene-CCO53_RS02385;Name=CCO53_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02385;old_locus_tag=CCO53_02385 NZ_NPLZ01000001.1 Protein Homology CDS 465202 465828 . + 0 ID=cds-WP_000253545.1;Parent=gene-CCO53_RS02385;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=CCO53_RS02385;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 465967 466125 . - . ID=gene-CCO53_RS23915;Name=CCO53_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23915 NZ_NPLZ01000001.1 Protein Homology CDS 465967 466125 . - 0 ID=cds-WP_223148970.1;Parent=gene-CCO53_RS23915;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=CCO53_RS23915;product=peptidase;protein_id=WP_223148970.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 466055 467137 . + . ID=gene-CCO53_RS02390;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=CCO53_RS02390;old_locus_tag=CCO53_02390 NZ_NPLZ01000001.1 Protein Homology CDS 466055 467137 . + 0 ID=cds-WP_223151197.1;Parent=gene-CCO53_RS02390;Dbxref=GenBank:WP_223151197.1;Name=WP_223151197.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=CCO53_RS02390;product=murein hydrolase activator NlpD;protein_id=WP_223151197.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 467200 468192 . + . ID=gene-CCO53_RS02395;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=CCO53_RS02395;old_locus_tag=CCO53_02395 NZ_NPLZ01000001.1 Protein Homology CDS 467200 468192 . + 0 ID=cds-WP_000081498.1;Parent=gene-CCO53_RS02395;Dbxref=GenBank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=CCO53_RS02395;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 468237 468473 . - . ID=gene-CCO53_RS02400;Name=CCO53_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02400;old_locus_tag=CCO53_02400 NZ_NPLZ01000001.1 Protein Homology CDS 468237 468473 . - 0 ID=cds-WP_000562964.1;Parent=gene-CCO53_RS02400;Dbxref=GenBank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=CCO53_RS02400;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562964.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 468484 469911 . - . ID=gene-CCO53_RS02405;Name=CCO53_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02405;old_locus_tag=CCO53_02405 NZ_NPLZ01000001.1 Protein Homology CDS 468484 469911 . - 0 ID=cds-WP_000863168.1;Parent=gene-CCO53_RS02405;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=CCO53_RS02405;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 469911 470504 . - . ID=gene-CCO53_RS02410;Name=CCO53_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02410;old_locus_tag=CCO53_02410 NZ_NPLZ01000001.1 Protein Homology CDS 469911 470504 . - 0 ID=cds-WP_001237180.1;Parent=gene-CCO53_RS02410;Dbxref=GenBank:WP_001237180.1;Name=WP_001237180.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=CCO53_RS02410;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237180.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 470675 471079 . + . ID=gene-CCO53_RS02415;Name=CCO53_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02415;old_locus_tag=CCO53_02415 NZ_NPLZ01000001.1 Protein Homology CDS 470675 471079 . + 0 ID=cds-WP_000423338.1;Parent=gene-CCO53_RS02415;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=CCO53_RS02415;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 471098 471862 . - . ID=gene-CCO53_RS02420;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=CCO53_RS02420;old_locus_tag=CCO53_02420 NZ_NPLZ01000001.1 Protein Homology CDS 471098 471862 . - 0 ID=cds-WP_000613178.1;Parent=gene-CCO53_RS02420;Dbxref=GenBank:WP_000613178.1;Name=WP_000613178.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=CCO53_RS02420;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613178.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 472059 472982 . + . ID=gene-CCO53_RS02425;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=CCO53_RS02425;old_locus_tag=CCO53_02425 NZ_NPLZ01000001.1 Protein Homology CDS 472059 472982 . + 0 ID=cds-WP_058331196.1;Parent=gene-CCO53_RS02425;Dbxref=GenBank:WP_058331196.1;Name=WP_058331196.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=CCO53_RS02425;product=L-threonate dehydrogenase;protein_id=WP_058331196.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 472976 474238 . + . ID=gene-CCO53_RS02430;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=CCO53_RS02430;old_locus_tag=CCO53_02430 NZ_NPLZ01000001.1 Protein Homology CDS 472976 474238 . + 0 ID=cds-WP_058331195.1;Parent=gene-CCO53_RS02430;Dbxref=GenBank:WP_058331195.1;Name=WP_058331195.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=CCO53_RS02430;product=3-oxo-tetronate kinase;protein_id=WP_058331195.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 474235 474873 . + . ID=gene-CCO53_RS02435;Name=CCO53_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02435;old_locus_tag=CCO53_02435 NZ_NPLZ01000001.1 Protein Homology CDS 474235 474873 . + 0 ID=cds-WP_000153636.1;Parent=gene-CCO53_RS02435;Dbxref=GenBank:WP_000153636.1;Name=WP_000153636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=CCO53_RS02435;product=aldolase;protein_id=WP_000153636.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 474878 475654 . + . ID=gene-CCO53_RS02440;Name=CCO53_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02440;old_locus_tag=CCO53_02440 NZ_NPLZ01000001.1 Protein Homology CDS 474878 475654 . + 0 ID=cds-WP_094887544.1;Parent=gene-CCO53_RS02440;Dbxref=GenBank:WP_094887544.1;Name=WP_094887544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=CCO53_RS02440;product=HPr family phosphocarrier protein;protein_id=WP_094887544.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 475694 476644 . + . ID=gene-CCO53_RS02445;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=CCO53_RS02445;old_locus_tag=CCO53_02445 NZ_NPLZ01000001.1 Protein Homology CDS 475694 476644 . + 0 ID=cds-WP_001165727.1;Parent=gene-CCO53_RS02445;Dbxref=GenBank:WP_001165727.1;Name=WP_001165727.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=CCO53_RS02445;product=D-erythronate dehydrogenase;protein_id=WP_001165727.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 476641 478137 . + . ID=gene-CCO53_RS02450;Name=CCO53_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02450;old_locus_tag=CCO53_02450 NZ_NPLZ01000001.1 Protein Homology CDS 476641 478137 . + 0 ID=cds-WP_000202725.1;Parent=gene-CCO53_RS02450;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=CCO53_RS02450;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 478179 479111 . - . ID=gene-CCO53_RS02455;Name=CCO53_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02455;old_locus_tag=CCO53_02455 NZ_NPLZ01000001.1 Protein Homology CDS 478179 479111 . - 0 ID=cds-WP_072102872.1;Parent=gene-CCO53_RS02455;Dbxref=GenBank:WP_072102872.1;Name=WP_072102872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=CCO53_RS02455;product=LysR family transcriptional regulator;protein_id=WP_072102872.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 479199 480407 . + . ID=gene-CCO53_RS02460;Name=CCO53_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02460;old_locus_tag=CCO53_02460 NZ_NPLZ01000001.1 Protein Homology CDS 479199 480407 . + 0 ID=cds-WP_094887545.1;Parent=gene-CCO53_RS02460;Dbxref=GenBank:WP_094887545.1;Name=WP_094887545.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=CCO53_RS02460;product=MFS transporter;protein_id=WP_094887545.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 480404 480784 . + . ID=gene-CCO53_RS02465;Name=CCO53_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02465;old_locus_tag=CCO53_02465 NZ_NPLZ01000001.1 Protein Homology CDS 480404 480784 . + 0 ID=cds-WP_094887546.1;Parent=gene-CCO53_RS02465;Dbxref=GenBank:WP_094887546.1;Name=WP_094887546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=CCO53_RS02465;product=DUF4440 domain-containing protein;protein_id=WP_094887546.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 480840 483407 . - . ID=gene-CCO53_RS02470;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CCO53_RS02470;old_locus_tag=CCO53_02470 NZ_NPLZ01000001.1 Protein Homology CDS 480840 483407 . - 0 ID=cds-WP_058331193.1;Parent=gene-CCO53_RS02470;Dbxref=GenBank:WP_058331193.1;Name=WP_058331193.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=CCO53_RS02470;product=DNA mismatch repair protein MutS;protein_id=WP_058331193.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 483565 484086 . + . ID=gene-CCO53_RS02475;Name=CCO53_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02475;old_locus_tag=CCO53_02475 NZ_NPLZ01000001.1 Protein Homology CDS 483565 484086 . + 0 ID=cds-WP_015633084.1;Parent=gene-CCO53_RS02475;Dbxref=GenBank:WP_015633084.1;Name=WP_015633084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=CCO53_RS02475;product=hypothetical protein;protein_id=WP_015633084.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 484257 484913 . - . ID=gene-CCO53_RS02480;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=CCO53_RS02480;old_locus_tag=CCO53_02480 NZ_NPLZ01000001.1 Protein Homology CDS 484257 484913 . - 0 ID=cds-WP_000420451.1;Parent=gene-CCO53_RS02480;Dbxref=GenBank:WP_000420451.1;Name=WP_000420451.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=CCO53_RS02480;product=protein-serine/threonine phosphatase;protein_id=WP_000420451.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq pseudogene 485140 485565 . + . ID=gene-CCO53_RS02485;Name=CCO53_RS02485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS02485;old_locus_tag=CCO53_02485;partial=true;pseudo=true;start_range=.,485140 NZ_NPLZ01000001.1 Protein Homology CDS 485140 485565 . + 0 ID=cds-CCO53_RS02485;Parent=gene-CCO53_RS02485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=CCO53_RS02485;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,485140;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 485638 486165 . - . ID=gene-CCO53_RS02490;Name=CCO53_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02490;old_locus_tag=CCO53_02490 NZ_NPLZ01000001.1 Protein Homology CDS 485638 486165 . - 0 ID=cds-WP_000971655.1;Parent=gene-CCO53_RS02490;Dbxref=GenBank:WP_000971655.1;Name=WP_000971655.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=CCO53_RS02490;product=GNAT family N-acetyltransferase;protein_id=WP_000971655.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 486162 486452 . - . ID=gene-CCO53_RS02495;Name=CCO53_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02495;old_locus_tag=CCO53_02495 NZ_NPLZ01000001.1 Protein Homology CDS 486162 486452 . - 0 ID=cds-WP_000855694.1;Parent=gene-CCO53_RS02495;Dbxref=GenBank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=CCO53_RS02495;product=DUF1778 domain-containing protein;protein_id=WP_000855694.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq pseudogene 486720 486920 . - . ID=gene-CCO53_RS02500;Name=CCO53_RS02500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS02500;old_locus_tag=CCO53_02500;partial=true;pseudo=true;start_range=.,486720 NZ_NPLZ01000001.1 Protein Homology CDS 486720 486920 . - 0 ID=cds-CCO53_RS02500;Parent=gene-CCO53_RS02500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO53_RS02500;partial=true;product=transposase;pseudo=true;start_range=.,486720;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 487161 487487 . + . ID=gene-CCO53_RS02505;Name=CCO53_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02505;old_locus_tag=CCO53_02505 NZ_NPLZ01000001.1 Protein Homology CDS 487161 487487 . + 0 ID=cds-WP_050067855.1;Parent=gene-CCO53_RS02505;Dbxref=GenBank:WP_050067855.1;Name=WP_050067855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=CCO53_RS02505;product=hypothetical protein;protein_id=WP_050067855.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 487760 488107 . - . ID=gene-CCO53_RS02510;Name=CCO53_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02510;old_locus_tag=CCO53_02510 NZ_NPLZ01000001.1 Protein Homology CDS 487760 488107 . - 0 ID=cds-WP_001555786.1;Parent=gene-CCO53_RS02510;Dbxref=GenBank:WP_001555786.1;Name=WP_001555786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=CCO53_RS02510;product=DUF1493 family protein;protein_id=WP_001555786.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 488092 488541 . - . ID=gene-CCO53_RS02515;Name=CCO53_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02515;old_locus_tag=CCO53_02515 NZ_NPLZ01000001.1 Protein Homology CDS 488092 488541 . - 0 ID=cds-WP_000381613.1;Parent=gene-CCO53_RS02515;Dbxref=GenBank:WP_000381613.1;Name=WP_000381613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=CCO53_RS02515;product=STM2901 family protein;protein_id=WP_000381613.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 488973 489416 . - . ID=gene-CCO53_RS02520;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=CCO53_RS02520;old_locus_tag=CCO53_02520 NZ_NPLZ01000001.1 Protein Homology CDS 488973 489416 . - 0 ID=cds-WP_058331192.1;Parent=gene-CCO53_RS02520;Dbxref=GenBank:WP_058331192.1;Name=WP_058331192.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=CCO53_RS02520;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_058331192.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 489872 490522 . + . ID=gene-CCO53_RS02525;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=CCO53_RS02525;old_locus_tag=CCO53_02525 NZ_NPLZ01000001.1 Protein Homology CDS 489872 490522 . + 0 ID=cds-WP_001674874.1;Parent=gene-CCO53_RS02525;Dbxref=GenBank:WP_001674874.1;Name=WP_001674874.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=CCO53_RS02525;product=type III secretion system transcriptional activator InvF;protein_id=WP_001674874.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 490519 492207 . + . ID=gene-CCO53_RS02530;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=CCO53_RS02530;old_locus_tag=CCO53_02530 NZ_NPLZ01000001.1 Protein Homology CDS 490519 492207 . + 0 ID=cds-WP_000848114.1;Parent=gene-CCO53_RS02530;Dbxref=GenBank:WP_000848114.1;Name=WP_000848114.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=CCO53_RS02530;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848114.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 492204 493322 . + . ID=gene-CCO53_RS02535;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=CCO53_RS02535;old_locus_tag=CCO53_02535 NZ_NPLZ01000001.1 Protein Homology CDS 492204 493322 . + 0 ID=cds-WP_000612171.1;Parent=gene-CCO53_RS02535;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=CCO53_RS02535;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 493347 495404 . + . ID=gene-CCO53_RS02540;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=CCO53_RS02540;old_locus_tag=CCO53_02540 NZ_NPLZ01000001.1 Protein Homology CDS 493347 495404 . + 0 ID=cds-WP_000927219.1;Parent=gene-CCO53_RS02540;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=CCO53_RS02540;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 495428 495835 . + . ID=gene-CCO53_RS02545;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=CCO53_RS02545;old_locus_tag=CCO53_02545 NZ_NPLZ01000001.1 Protein Homology CDS 495428 495835 . + 0 ID=cds-WP_001164066.1;Parent=gene-CCO53_RS02545;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=CCO53_RS02545;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 495832 497127 . + . ID=gene-CCO53_RS02550;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=CCO53_RS02550;old_locus_tag=CCO53_02550 NZ_NPLZ01000001.1 Protein Homology CDS 495832 497127 . + 0 ID=cds-WP_000856766.1;Parent=gene-CCO53_RS02550;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=CCO53_RS02550;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 497105 497548 . + . ID=gene-CCO53_RS02555;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=CCO53_RS02555;old_locus_tag=CCO53_02555 NZ_NPLZ01000001.1 Protein Homology CDS 497105 497548 . + 0 ID=cds-WP_000555884.1;Parent=gene-CCO53_RS02555;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=CCO53_RS02555;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 497548 498558 . + . ID=gene-CCO53_RS02560;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=CCO53_RS02560;old_locus_tag=CCO53_02560 NZ_NPLZ01000001.1 Protein Homology CDS 497548 498558 . + 0 ID=cds-WP_058331191.1;Parent=gene-CCO53_RS02560;Dbxref=GenBank:WP_058331191.1;Name=WP_058331191.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=CCO53_RS02560;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_058331191.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 498558 499469 . + . ID=gene-CCO53_RS02565;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=CCO53_RS02565;old_locus_tag=CCO53_02565 NZ_NPLZ01000001.1 Protein Homology CDS 498558 499469 . + 0 ID=cds-WP_000058734.1;Parent=gene-CCO53_RS02565;Dbxref=GenBank:WP_000058734.1;Name=WP_000058734.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=CCO53_RS02565;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058734.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 499459 500133 . + . ID=gene-CCO53_RS02570;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=CCO53_RS02570;old_locus_tag=CCO53_02570 NZ_NPLZ01000001.1 Protein Homology CDS 499459 500133 . + 0 ID=cds-WP_000526016.1;Parent=gene-CCO53_RS02570;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=CCO53_RS02570;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 500159 500419 . + . ID=gene-CCO53_RS02575;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=CCO53_RS02575;old_locus_tag=CCO53_02575 NZ_NPLZ01000001.1 Protein Homology CDS 500159 500419 . + 0 ID=cds-WP_000342503.1;Parent=gene-CCO53_RS02575;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=CCO53_RS02575;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 500423 501214 . + . ID=gene-CCO53_RS02580;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=CCO53_RS02580;old_locus_tag=CCO53_02580 NZ_NPLZ01000001.1 Protein Homology CDS 500423 501214 . + 0 ID=cds-WP_094887547.1;Parent=gene-CCO53_RS02580;Dbxref=GenBank:WP_094887547.1;Name=WP_094887547.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=CCO53_RS02580;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_094887547.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 501201 502271 . + . ID=gene-CCO53_RS02585;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=CCO53_RS02585;old_locus_tag=CCO53_02585 NZ_NPLZ01000001.1 Protein Homology CDS 501201 502271 . + 0 ID=cds-WP_000097719.1;Parent=gene-CCO53_RS02585;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=CCO53_RS02585;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 502409 502906 . + . ID=gene-CCO53_RS02590;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=CCO53_RS02590;old_locus_tag=CCO53_02590 NZ_NPLZ01000001.1 Protein Homology CDS 502409 502906 . + 0 ID=cds-WP_000386309.1;Parent=gene-CCO53_RS02590;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=CCO53_RS02590;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 502909 504690 . + . ID=gene-CCO53_RS02595;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=CCO53_RS02595;old_locus_tag=CCO53_02595 NZ_NPLZ01000001.1 Protein Homology CDS 502909 504690 . + 0 ID=cds-WP_058331190.1;Parent=gene-CCO53_RS02595;Dbxref=GenBank:WP_058331190.1;Name=WP_058331190.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=CCO53_RS02595;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_058331190.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 504718 505947 . + . ID=gene-CCO53_RS02600;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=CCO53_RS02600;old_locus_tag=CCO53_02600 NZ_NPLZ01000001.1 Protein Homology CDS 504718 505947 . + 0 ID=cds-WP_000909019.1;Parent=gene-CCO53_RS02600;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=CCO53_RS02600;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 506018 507049 . + . ID=gene-CCO53_RS02605;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=CCO53_RS02605;old_locus_tag=CCO53_02605 NZ_NPLZ01000001.1 Protein Homology CDS 506018 507049 . + 0 ID=cds-WP_058331189.1;Parent=gene-CCO53_RS02605;Dbxref=GenBank:WP_058331189.1;Name=WP_058331189.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=CCO53_RS02605;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_058331189.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 507068 509113 . + . ID=gene-CCO53_RS02610;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=CCO53_RS02610;old_locus_tag=CCO53_02610 NZ_NPLZ01000001.1 Protein Homology CDS 507068 509113 . + 0 ID=cds-WP_080160166.1;Parent=gene-CCO53_RS02610;Dbxref=GenBank:WP_080160166.1;Name=WP_080160166.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=CCO53_RS02610;product=SPI-1 type III secretion system effector SipA;protein_id=WP_080160166.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 509132 509380 . + . ID=gene-CCO53_RS02615;Name=CCO53_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02615;old_locus_tag=CCO53_02615 NZ_NPLZ01000001.1 Protein Homology CDS 509132 509380 . + 0 ID=cds-WP_023227559.1;Parent=gene-CCO53_RS02615;Dbxref=GenBank:WP_023227559.1;Name=WP_023227559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055583.1;locus_tag=CCO53_RS02615;product=acyl carrier protein;protein_id=WP_023227559.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 509424 509684 . + . ID=gene-CCO53_RS02620;Name=CCO53_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02620;old_locus_tag=CCO53_02620 NZ_NPLZ01000001.1 Protein Homology CDS 509424 509684 . + 0 ID=cds-WP_076727070.1;Parent=gene-CCO53_RS02620;Dbxref=GenBank:WP_076727070.1;Name=WP_076727070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=CCO53_RS02620;product=hypothetical protein;protein_id=WP_076727070.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 509711 510103 . + . ID=gene-CCO53_RS02625;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=CCO53_RS02625;old_locus_tag=CCO53_02625 NZ_NPLZ01000001.1 Protein Homology CDS 509711 510103 . + 0 ID=cds-WP_058331185.1;Parent=gene-CCO53_RS02625;Dbxref=GenBank:WP_058331185.1;Name=WP_058331185.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=CCO53_RS02625;product=chaperone SicP;protein_id=WP_058331185.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 510090 511721 . + . ID=gene-CCO53_RS02630;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=CCO53_RS02630;old_locus_tag=CCO53_02630 NZ_NPLZ01000001.1 Protein Homology CDS 510090 511721 . + 0 ID=cds-WP_076727068.1;Parent=gene-CCO53_RS02630;Dbxref=GenBank:WP_076727068.1;Name=WP_076727068.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=CCO53_RS02630;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_076727068.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq pseudogene 511803 513010 . + . ID=gene-CCO53_RS02635;Name=CCO53_RS02635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS02635;old_locus_tag=CCO53_02635;pseudo=true NZ_NPLZ01000001.1 Protein Homology CDS 511803 513010 . + 0 ID=cds-CCO53_RS02635;Parent=gene-CCO53_RS02635;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO53_RS02635;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 513096 513578 . - . ID=gene-CCO53_RS02640;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=CCO53_RS02640;old_locus_tag=CCO53_02640 NZ_NPLZ01000001.1 Protein Homology CDS 513096 513578 . - 0 ID=cds-WP_058331181.1;Parent=gene-CCO53_RS02640;Dbxref=GenBank:WP_058331181.1;Name=WP_058331181.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=CCO53_RS02640;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_058331181.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 513596 515257 . - . ID=gene-CCO53_RS02645;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=CCO53_RS02645;old_locus_tag=CCO53_02645 NZ_NPLZ01000001.1 Protein Homology CDS 513596 515257 . - 0 ID=cds-WP_058331180.1;Parent=gene-CCO53_RS02645;Dbxref=GenBank:WP_058331180.1;Name=WP_058331180.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=CCO53_RS02645;product=transcriptional regulator HilA;protein_id=WP_058331180.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 516349 517278 . - . ID=gene-CCO53_RS02650;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=CCO53_RS02650;old_locus_tag=CCO53_02650 NZ_NPLZ01000001.1 Protein Homology CDS 516349 517278 . - 0 ID=cds-WP_076727066.1;Parent=gene-CCO53_RS02650;Dbxref=GenBank:WP_076727066.1;Name=WP_076727066.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=CCO53_RS02650;product=transcriptional regulator HilD;protein_id=WP_076727066.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 517594 518772 . + . ID=gene-CCO53_RS02655;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=CCO53_RS02655;old_locus_tag=CCO53_02655 NZ_NPLZ01000001.1 Protein Homology CDS 517594 518772 . + 0 ID=cds-WP_058331198.1;Parent=gene-CCO53_RS02655;Dbxref=GenBank:WP_058331198.1;Name=WP_058331198.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=CCO53_RS02655;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_058331198.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 518797 519039 . + . ID=gene-CCO53_RS02660;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=CCO53_RS02660;old_locus_tag=CCO53_02660 NZ_NPLZ01000001.1 Protein Homology CDS 518797 519039 . + 0 ID=cds-WP_001143300.1;Parent=gene-CCO53_RS02660;Dbxref=GenBank:WP_001143300.1;Name=WP_001143300.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=CCO53_RS02660;product=type III secretion system needle filament protein PrgI;protein_id=WP_001143300.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 519058 519363 . + . ID=gene-CCO53_RS02665;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=CCO53_RS02665;old_locus_tag=CCO53_02665 NZ_NPLZ01000001.1 Protein Homology CDS 519058 519363 . + 0 ID=cds-WP_000020427.1;Parent=gene-CCO53_RS02665;Dbxref=GenBank:WP_000020427.1;Name=WP_000020427.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=CCO53_RS02665;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020427.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 519360 520118 . + . ID=gene-CCO53_RS02670;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=CCO53_RS02670;old_locus_tag=CCO53_02670 NZ_NPLZ01000001.1 Protein Homology CDS 519360 520118 . + 0 ID=cds-WP_000621238.1;Parent=gene-CCO53_RS02670;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=CCO53_RS02670;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 520090 520689 . + . ID=gene-CCO53_RS02675;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=CCO53_RS02675;old_locus_tag=CCO53_02675 NZ_NPLZ01000001.1 Protein Homology CDS 520090 520689 . + 0 ID=cds-WP_094887548.1;Parent=gene-CCO53_RS02675;Dbxref=GenBank:WP_094887548.1;Name=WP_094887548.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=CCO53_RS02675;product=oxygen-regulated invasion protein OrgA;protein_id=WP_094887548.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 520646 521317 . + . ID=gene-CCO53_RS02680;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=CCO53_RS02680;old_locus_tag=CCO53_02680 NZ_NPLZ01000001.1 Protein Homology CDS 520646 521317 . + 0 ID=cds-WP_076727064.1;Parent=gene-CCO53_RS02680;Dbxref=GenBank:WP_076727064.1;Name=WP_076727064.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835247.1;locus_tag=CCO53_RS02680;product=type III secretion system linker protein OrgB;protein_id=WP_076727064.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 521333 521785 . + . ID=gene-CCO53_RS02685;Name=CCO53_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02685;old_locus_tag=CCO53_02685 NZ_NPLZ01000001.1 Protein Homology CDS 521333 521785 . + 0 ID=cds-WP_058331177.1;Parent=gene-CCO53_RS02685;Dbxref=GenBank:WP_058331177.1;Name=WP_058331177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=CCO53_RS02685;product=type III secretion system effector protein OrgC;protein_id=WP_058331177.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 522130 523017 . + . ID=gene-CCO53_RS02690;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=CCO53_RS02690;old_locus_tag=CCO53_02690 NZ_NPLZ01000001.1 Protein Homology CDS 522130 523017 . + 0 ID=cds-WP_058331176.1;Parent=gene-CCO53_RS02690;Dbxref=GenBank:WP_058331176.1;Name=WP_058331176.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=CCO53_RS02690;product=invasion transcriptional regulator HilC;protein_id=WP_058331176.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 523402 524157 . + . ID=gene-CCO53_RS02700;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=CCO53_RS02700;old_locus_tag=CCO53_02695 NZ_NPLZ01000001.1 Protein Homology CDS 523402 524157 . + 0 ID=cds-WP_058331175.1;Parent=gene-CCO53_RS02700;Dbxref=GenBank:WP_058331175.1;Name=WP_058331175.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=CCO53_RS02700;product=transcriptional regulator SprB;protein_id=WP_058331175.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 524434 525282 . - . ID=gene-CCO53_RS02710;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=CCO53_RS02710;old_locus_tag=CCO53_02705 NZ_NPLZ01000001.1 Protein Homology CDS 524434 525282 . - 0 ID=cds-WP_058331174.1;Parent=gene-CCO53_RS02710;Dbxref=GenBank:WP_058331174.1;Name=WP_058331174.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=CCO53_RS02710;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_058331174.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 525273 526133 . - . ID=gene-CCO53_RS02715;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=CCO53_RS02715;old_locus_tag=CCO53_02710 NZ_NPLZ01000001.1 Protein Homology CDS 525273 526133 . - 0 ID=cds-WP_001104336.1;Parent=gene-CCO53_RS02715;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=CCO53_RS02715;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 526130 526951 . - . ID=gene-CCO53_RS02720;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=CCO53_RS02720;old_locus_tag=CCO53_02715 NZ_NPLZ01000001.1 Protein Homology CDS 526130 526951 . - 0 ID=cds-WP_094887549.1;Parent=gene-CCO53_RS02720;Dbxref=GenBank:WP_094887549.1;Name=WP_094887549.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=CCO53_RS02720;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_094887549.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 526948 527865 . - . ID=gene-CCO53_RS02725;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=CCO53_RS02725;old_locus_tag=CCO53_02720 NZ_NPLZ01000001.1 Protein Homology CDS 526948 527865 . - 0 ID=cds-WP_000182930.1;Parent=gene-CCO53_RS02725;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=CCO53_RS02725;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 528047 528391 . + . ID=gene-CCO53_RS02730;Name=CCO53_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02730;old_locus_tag=CCO53_02725 NZ_NPLZ01000001.1 Protein Homology CDS 528047 528391 . + 0 ID=cds-WP_001117944.1;Parent=gene-CCO53_RS02730;Dbxref=GenBank:WP_001117944.1;Name=WP_001117944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=CCO53_RS02730;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117944.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 528453 530531 . - . ID=gene-CCO53_RS02735;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO53_RS02735;old_locus_tag=CCO53_02730 NZ_NPLZ01000001.1 Protein Homology CDS 528453 530531 . - 0 ID=cds-WP_000122692.1;Parent=gene-CCO53_RS02735;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=CCO53_RS02735;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 530750 531760 . - . ID=gene-CCO53_RS02740;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=CCO53_RS02740;old_locus_tag=CCO53_02735 NZ_NPLZ01000001.1 Protein Homology CDS 530750 531760 . - 0 ID=cds-WP_080160165.1;Parent=gene-CCO53_RS02740;Dbxref=GenBank:WP_080160165.1;Name=WP_080160165.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=CCO53_RS02740;product=hydrogenase expression/formation protein HypE;protein_id=WP_080160165.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 531757 532878 . - . ID=gene-CCO53_RS02745;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=CCO53_RS02745;old_locus_tag=CCO53_02740 NZ_NPLZ01000001.1 Protein Homology CDS 531757 532878 . - 0 ID=cds-WP_001212956.1;Parent=gene-CCO53_RS02745;Dbxref=GenBank:WP_001212956.1;Name=WP_001212956.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=CCO53_RS02745;product=hydrogenase formation protein HypD;protein_id=WP_001212956.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 532878 533150 . - . ID=gene-CCO53_RS02750;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO53_RS02750;old_locus_tag=CCO53_02745 NZ_NPLZ01000001.1 Protein Homology CDS 532878 533150 . - 0 ID=cds-WP_000334871.1;Parent=gene-CCO53_RS02750;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=CCO53_RS02750;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 533141 534013 . - . ID=gene-CCO53_RS02755;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=CCO53_RS02755;old_locus_tag=CCO53_02750 NZ_NPLZ01000001.1 Protein Homology CDS 533141 534013 . - 0 ID=cds-WP_000337640.1;Parent=gene-CCO53_RS02755;Dbxref=GenBank:WP_000337640.1;Name=WP_000337640.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=CCO53_RS02755;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337640.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 534082 534438 . - . ID=gene-CCO53_RS02760;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO53_RS02760;old_locus_tag=CCO53_02755 NZ_NPLZ01000001.1 Protein Homology CDS 534082 534438 . - 0 ID=cds-WP_000544461.1;Parent=gene-CCO53_RS02760;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=CCO53_RS02760;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 534648 535109 . + . ID=gene-CCO53_RS02770;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=CCO53_RS02770;old_locus_tag=CCO53_02765 NZ_NPLZ01000001.1 Protein Homology CDS 534648 535109 . + 0 ID=cds-WP_000158073.1;Parent=gene-CCO53_RS02770;Dbxref=GenBank:WP_000158073.1;Name=WP_000158073.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=CCO53_RS02770;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158073.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 535255 535863 . + . ID=gene-CCO53_RS02775;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=CCO53_RS02775;old_locus_tag=CCO53_02770 NZ_NPLZ01000001.1 Protein Homology CDS 535255 535863 . + 0 ID=cds-WP_001079163.1;Parent=gene-CCO53_RS02775;Dbxref=GenBank:WP_001079163.1;Name=WP_001079163.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=CCO53_RS02775;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079163.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 535863 537689 . + . ID=gene-CCO53_RS02780;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=CCO53_RS02780;old_locus_tag=CCO53_02775 NZ_NPLZ01000001.1 Protein Homology CDS 535863 537689 . + 0 ID=cds-WP_000097037.1;Parent=gene-CCO53_RS02780;Dbxref=GenBank:WP_000097037.1;Name=WP_000097037.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=CCO53_RS02780;product=formate hydrogenlyase subunit 3;protein_id=WP_000097037.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 537692 538615 . + . ID=gene-CCO53_RS02785;Name=CCO53_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02785;old_locus_tag=CCO53_02780 NZ_NPLZ01000001.1 Protein Homology CDS 537692 538615 . + 0 ID=cds-WP_058331172.1;Parent=gene-CCO53_RS02785;Dbxref=GenBank:WP_058331172.1;Name=WP_058331172.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=CCO53_RS02785;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_058331172.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 538633 540342 . + . ID=gene-CCO53_RS02790;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=CCO53_RS02790;old_locus_tag=CCO53_02785 NZ_NPLZ01000001.1 Protein Homology CDS 538633 540342 . + 0 ID=cds-WP_001288155.1;Parent=gene-CCO53_RS02790;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=CCO53_RS02790;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 540352 540894 . + . ID=gene-CCO53_RS02795;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=CCO53_RS02795;old_locus_tag=CCO53_02790 NZ_NPLZ01000001.1 Protein Homology CDS 540352 540894 . + 0 ID=cds-WP_000493767.1;Parent=gene-CCO53_RS02795;Dbxref=GenBank:WP_000493767.1;Name=WP_000493767.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=CCO53_RS02795;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493767.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 540894 541661 . + . ID=gene-CCO53_RS02800;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=CCO53_RS02800;old_locus_tag=CCO53_02795 NZ_NPLZ01000001.1 Protein Homology CDS 540894 541661 . + 0 ID=cds-WP_000067419.1;Parent=gene-CCO53_RS02800;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=CCO53_RS02800;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 541658 542068 . + . ID=gene-CCO53_RS02805;Name=CCO53_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02805;old_locus_tag=CCO53_02800 NZ_NPLZ01000001.1 Protein Homology CDS 541658 542068 . + 0 ID=cds-WP_000003725.1;Parent=gene-CCO53_RS02805;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=CCO53_RS02805;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 542061 542531 . + . ID=gene-CCO53_RS02810;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=CCO53_RS02810;old_locus_tag=CCO53_02805 NZ_NPLZ01000001.1 Protein Homology CDS 542061 542531 . + 0 ID=cds-WP_023181870.1;Parent=gene-CCO53_RS02810;Dbxref=GenBank:WP_023181870.1;Name=WP_023181870.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=CCO53_RS02810;product=hydrogenase maturation peptidase HycI;protein_id=WP_023181870.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 542558 543367 . + . ID=gene-CCO53_RS02815;Name=CCO53_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02815;old_locus_tag=CCO53_02810 NZ_NPLZ01000001.1 Protein Homology CDS 542558 543367 . + 0 ID=cds-WP_094887550.1;Parent=gene-CCO53_RS02815;Dbxref=GenBank:WP_094887550.1;Name=WP_094887550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=CCO53_RS02815;product=hypothetical protein;protein_id=WP_094887550.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 543568 544113 . + . ID=gene-CCO53_RS02820;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=CCO53_RS02820;old_locus_tag=CCO53_02815 NZ_NPLZ01000001.1 Protein Homology CDS 543568 544113 . + 0 ID=cds-WP_001078791.1;Parent=gene-CCO53_RS02820;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=CCO53_RS02820;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 544259 546499 . + . ID=gene-CCO53_RS02825;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=CCO53_RS02825;old_locus_tag=CCO53_02820 NZ_NPLZ01000001.1 Protein Homology CDS 544259 546499 . + 0 ID=cds-WP_058331169.1;Parent=gene-CCO53_RS02825;Dbxref=GenBank:WP_058331169.1;Name=WP_058331169.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=CCO53_RS02825;product=carbamoyltransferase HypF;protein_id=WP_058331169.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 546596 547729 . - . ID=gene-CCO53_RS02830;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=CCO53_RS02830;old_locus_tag=CCO53_02825 NZ_NPLZ01000001.1 Protein Homology CDS 546596 547729 . - 0 ID=cds-WP_023202132.1;Parent=gene-CCO53_RS02830;Dbxref=GenBank:WP_023202132.1;Name=WP_023202132.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=CCO53_RS02830;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_023202132.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 547726 549165 . - . ID=gene-CCO53_RS02835;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=CCO53_RS02835;old_locus_tag=CCO53_02830 NZ_NPLZ01000001.1 Protein Homology CDS 547726 549165 . - 0 ID=cds-WP_000026011.1;Parent=gene-CCO53_RS02835;Dbxref=GenBank:WP_000026011.1;Name=WP_000026011.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=CCO53_RS02835;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000026011.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 549351 550871 . + . ID=gene-CCO53_RS02840;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=CCO53_RS02840;old_locus_tag=CCO53_02835 NZ_NPLZ01000001.1 Protein Homology CDS 549351 550871 . + 0 ID=cds-WP_000010814.1;Parent=gene-CCO53_RS02840;Dbxref=GenBank:WP_000010814.1;Name=WP_000010814.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=CCO53_RS02840;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010814.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 550868 551833 . - . ID=gene-CCO53_RS02845;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=CCO53_RS02845;old_locus_tag=CCO53_02840 NZ_NPLZ01000001.1 Protein Homology CDS 550868 551833 . - 0 ID=cds-WP_058331168.1;Parent=gene-CCO53_RS02845;Dbxref=GenBank:WP_058331168.1;Name=WP_058331168.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=CCO53_RS02845;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_058331168.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 551826 552599 . - . ID=gene-CCO53_RS02850;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=CCO53_RS02850;old_locus_tag=CCO53_02845 NZ_NPLZ01000001.1 Protein Homology CDS 551826 552599 . - 0 ID=cds-WP_000804536.1;Parent=gene-CCO53_RS02850;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=CCO53_RS02850;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 552797 553156 . - . ID=gene-CCO53_RS02855;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=CCO53_RS02855;old_locus_tag=CCO53_02850 NZ_NPLZ01000001.1 Protein Homology CDS 552797 553156 . - 0 ID=cds-WP_000255198.1;Parent=gene-CCO53_RS02855;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=CCO53_RS02855;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 553233 554012 . - . ID=gene-CCO53_RS02860;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=CCO53_RS02860;old_locus_tag=CCO53_02855 NZ_NPLZ01000001.1 Protein Homology CDS 553233 554012 . - 0 ID=cds-WP_001077372.1;Parent=gene-CCO53_RS02860;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=CCO53_RS02860;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 554024 554386 . - . ID=gene-CCO53_RS02865;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=CCO53_RS02865;old_locus_tag=CCO53_02860 NZ_NPLZ01000001.1 Protein Homology CDS 554024 554386 . - 0 ID=cds-WP_000111553.1;Parent=gene-CCO53_RS02865;Dbxref=GenBank:WP_000111553.1;Name=WP_000111553.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=CCO53_RS02865;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111553.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 554398 555369 . - . ID=gene-CCO53_RS02870;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=CCO53_RS02870;old_locus_tag=CCO53_02865 NZ_NPLZ01000001.1 Protein Homology CDS 554398 555369 . - 0 ID=cds-WP_058331167.1;Parent=gene-CCO53_RS02870;Dbxref=GenBank:WP_058331167.1;Name=WP_058331167.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=CCO53_RS02870;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_058331167.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 555366 555929 . - . ID=gene-CCO53_RS02875;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=CCO53_RS02875;old_locus_tag=CCO53_02870 NZ_NPLZ01000001.1 Protein Homology CDS 555366 555929 . - 0 ID=cds-WP_000573333.1;Parent=gene-CCO53_RS02875;Dbxref=GenBank:WP_000573333.1;Name=WP_000573333.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=CCO53_RS02875;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573333.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 556182 557261 . + . ID=gene-CCO53_RS02880;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=CCO53_RS02880;old_locus_tag=CCO53_02875 NZ_NPLZ01000001.1 Protein Homology CDS 556182 557261 . + 0 ID=cds-WP_058331166.1;Parent=gene-CCO53_RS02880;Dbxref=GenBank:WP_058331166.1;Name=WP_058331166.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=CCO53_RS02880;product=lytic murein transglycosylase B;protein_id=WP_058331166.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 557299 557544 . - . ID=gene-CCO53_RS23920;Name=CCO53_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23920;old_locus_tag=CCO53_02880 NZ_NPLZ01000001.1 Protein Homology CDS 557299 557544 . - 0 ID=cds-WP_000053777.1;Parent=gene-CCO53_RS23920;Dbxref=GenBank:WP_000053777.1;Name=WP_000053777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=CCO53_RS23920;product=hypothetical protein;protein_id=WP_000053777.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 557740 558237 . + . ID=gene-CCO53_RS02890;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=CCO53_RS02890;old_locus_tag=CCO53_02885 NZ_NPLZ01000001.1 Protein Homology CDS 557740 558237 . + 0 ID=cds-WP_000132239.1;Parent=gene-CCO53_RS02890;Dbxref=GenBank:WP_000132239.1;Name=WP_000132239.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=CCO53_RS02890;product=nicotinamide-nucleotide amidase;protein_id=WP_000132239.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 558322 559383 . + . ID=gene-CCO53_RS02895;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CCO53_RS02895;old_locus_tag=CCO53_02890 NZ_NPLZ01000001.1 Protein Homology CDS 558322 559383 . + 0 ID=cds-WP_000963150.1;Parent=gene-CCO53_RS02895;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=CCO53_RS02895;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 559500 560000 . + . ID=gene-CCO53_RS02900;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CCO53_RS02900;old_locus_tag=CCO53_02895 NZ_NPLZ01000001.1 Protein Homology CDS 559500 560000 . + 0 ID=cds-WP_001294863.1;Parent=gene-CCO53_RS02900;Dbxref=GenBank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=CCO53_RS02900;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 560236 562866 . + . ID=gene-CCO53_RS02910;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CCO53_RS02910;old_locus_tag=CCO53_02905 NZ_NPLZ01000001.1 Protein Homology CDS 560236 562866 . + 0 ID=cds-WP_023232043.1;Parent=gene-CCO53_RS02910;Dbxref=GenBank:WP_023232043.1;Name=WP_023232043.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=CCO53_RS02910;product=alanine--tRNA ligase;protein_id=WP_023232043.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 563101 563286 . + . ID=gene-CCO53_RS02915;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=CCO53_RS02915;old_locus_tag=CCO53_02910 NZ_NPLZ01000001.1 Protein Homology CDS 563101 563286 . + 0 ID=cds-WP_000906486.1;Parent=gene-CCO53_RS02915;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=CCO53_RS02915;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 563590 563682 . + . ID=gene-CCO53_RS02925;Name=CCO53_RS02925;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS02925;old_locus_tag=CCO53_02920 NZ_NPLZ01000001.1 tRNAscan-SE tRNA 563590 563682 . + . ID=rna-CCO53_RS02925;Parent=gene-CCO53_RS02925;anticodon=(pos:563624..563626);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS02925;product=tRNA-Ser NZ_NPLZ01000001.1 tRNAscan-SE exon 563590 563682 . + . ID=exon-CCO53_RS02925-1;Parent=rna-CCO53_RS02925;anticodon=(pos:563624..563626);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS02925;product=tRNA-Ser NZ_NPLZ01000001.1 RefSeq gene 563686 563762 . + . ID=gene-CCO53_RS02930;Name=CCO53_RS02930;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS02930;old_locus_tag=CCO53_02925 NZ_NPLZ01000001.1 tRNAscan-SE tRNA 563686 563762 . + . ID=rna-CCO53_RS02930;Parent=gene-CCO53_RS02930;anticodon=(pos:563720..563722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS02930;product=tRNA-Arg NZ_NPLZ01000001.1 tRNAscan-SE exon 563686 563762 . + . ID=exon-CCO53_RS02930-1;Parent=rna-CCO53_RS02930;anticodon=(pos:563720..563722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS02930;product=tRNA-Arg NZ_NPLZ01000001.1 RefSeq gene 563824 563900 . + . ID=gene-CCO53_RS02935;Name=CCO53_RS02935;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS02935;old_locus_tag=CCO53_02930 NZ_NPLZ01000001.1 tRNAscan-SE tRNA 563824 563900 . + . ID=rna-CCO53_RS02935;Parent=gene-CCO53_RS02935;anticodon=(pos:563858..563860);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS02935;product=tRNA-Arg NZ_NPLZ01000001.1 tRNAscan-SE exon 563824 563900 . + . ID=exon-CCO53_RS02935-1;Parent=rna-CCO53_RS02935;anticodon=(pos:563858..563860);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS02935;product=tRNA-Arg NZ_NPLZ01000001.1 RefSeq gene 563963 564039 . + . ID=gene-CCO53_RS02940;Name=CCO53_RS02940;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS02940;old_locus_tag=CCO53_02935 NZ_NPLZ01000001.1 tRNAscan-SE tRNA 563963 564039 . + . ID=rna-CCO53_RS02940;Parent=gene-CCO53_RS02940;anticodon=(pos:563997..563999);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS02940;product=tRNA-Arg NZ_NPLZ01000001.1 tRNAscan-SE exon 563963 564039 . + . ID=exon-CCO53_RS02940-1;Parent=rna-CCO53_RS02940;anticodon=(pos:563997..563999);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS02940;product=tRNA-Arg NZ_NPLZ01000001.1 RefSeq gene 564270 564836 . + . ID=gene-CCO53_RS02945;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=CCO53_RS02945;old_locus_tag=CCO53_02940 NZ_NPLZ01000001.1 Protein Homology CDS 564270 564836 . + 0 ID=cds-WP_058331165.1;Parent=gene-CCO53_RS02945;Dbxref=GenBank:WP_058331165.1;Name=WP_058331165.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=CCO53_RS02945;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_058331165.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 564833 565258 . + . ID=gene-CCO53_RS02950;Name=CCO53_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02950;old_locus_tag=CCO53_02945 NZ_NPLZ01000001.1 Protein Homology CDS 564833 565258 . + 0 ID=cds-WP_058331164.1;Parent=gene-CCO53_RS02950;Dbxref=GenBank:WP_058331164.1;Name=WP_058331164.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=CCO53_RS02950;product=YqaA family protein;protein_id=WP_058331164.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 565335 566891 . + . ID=gene-CCO53_RS02955;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=CCO53_RS02955;old_locus_tag=CCO53_02950 NZ_NPLZ01000001.1 Protein Homology CDS 565335 566891 . + 0 ID=cds-WP_000611821.1;Parent=gene-CCO53_RS02955;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=CCO53_RS02955;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 567041 567556 . + . ID=gene-CCO53_RS02960;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=CCO53_RS02960;old_locus_tag=CCO53_02955 NZ_NPLZ01000001.1 Protein Homology CDS 567041 567556 . + 0 ID=cds-WP_001130194.1;Parent=gene-CCO53_RS02960;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=CCO53_RS02960;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 567902 569272 . + . ID=gene-CCO53_RS02965;Name=CCO53_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02965;old_locus_tag=CCO53_02960 NZ_NPLZ01000001.1 Protein Homology CDS 567902 569272 . + 0 ID=cds-WP_000645137.1;Parent=gene-CCO53_RS02965;Dbxref=GenBank:WP_000645137.1;Name=WP_000645137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=CCO53_RS02965;product=carbohydrate porin;protein_id=WP_000645137.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 569321 570859 . - . ID=gene-CCO53_RS02970;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=CCO53_RS02970;old_locus_tag=CCO53_02965 NZ_NPLZ01000001.1 Protein Homology CDS 569321 570859 . - 0 ID=cds-WP_001187297.1;Parent=gene-CCO53_RS02970;Dbxref=GenBank:WP_001187297.1;Name=WP_001187297.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=CCO53_RS02970;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187297.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 570876 572048 . - . ID=gene-CCO53_RS02975;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=CCO53_RS02975;old_locus_tag=CCO53_02970 NZ_NPLZ01000001.1 Protein Homology CDS 570876 572048 . - 0 ID=cds-WP_001275600.1;Parent=gene-CCO53_RS02975;Dbxref=GenBank:WP_001275600.1;Name=WP_001275600.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=CCO53_RS02975;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275600.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 572175 572705 . - . ID=gene-CCO53_RS02980;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=CCO53_RS02980;old_locus_tag=CCO53_02975 NZ_NPLZ01000001.1 Protein Homology CDS 572175 572705 . - 0 ID=cds-WP_000378431.1;Parent=gene-CCO53_RS02980;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=CCO53_RS02980;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 573202 574386 . - . ID=gene-CCO53_RS02985;Name=CCO53_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS02985;old_locus_tag=CCO53_02980 NZ_NPLZ01000001.1 Protein Homology CDS 573202 574386 . - 0 ID=cds-WP_000165758.1;Parent=gene-CCO53_RS02985;Dbxref=GenBank:WP_000165758.1;Name=WP_000165758.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=CCO53_RS02985;product=MFS transporter;protein_id=WP_000165758.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 574551 575546 . - . ID=gene-CCO53_RS02990;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=CCO53_RS02990;old_locus_tag=CCO53_02985 NZ_NPLZ01000001.1 Protein Homology CDS 574551 575546 . - 0 ID=cds-WP_001216618.1;Parent=gene-CCO53_RS02990;Dbxref=GenBank:WP_001216618.1;Name=WP_001216618.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=CCO53_RS02990;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216618.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 575616 576680 . - . ID=gene-CCO53_RS02995;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=CCO53_RS02995;old_locus_tag=CCO53_02990 NZ_NPLZ01000001.1 Protein Homology CDS 575616 576680 . - 0 ID=cds-WP_000775015.1;Parent=gene-CCO53_RS02995;Dbxref=GenBank:WP_000775015.1;Name=WP_000775015.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=CCO53_RS02995;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775015.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 576673 577875 . - . ID=gene-CCO53_RS03000;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=CCO53_RS03000;old_locus_tag=CCO53_02995 NZ_NPLZ01000001.1 Protein Homology CDS 576673 577875 . - 0 ID=cds-WP_000985529.1;Parent=gene-CCO53_RS03000;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=CCO53_RS03000;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 578230 579189 . - . ID=gene-CCO53_RS03005;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CCO53_RS03005;old_locus_tag=CCO53_03000 NZ_NPLZ01000001.1 Protein Homology CDS 578230 579189 . - 0 ID=cds-WP_000777903.1;Parent=gene-CCO53_RS03005;Dbxref=GenBank:WP_000777903.1;Name=WP_000777903.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=CCO53_RS03005;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777903.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 579200 581344 . - . ID=gene-CCO53_RS03010;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CCO53_RS03010;old_locus_tag=CCO53_03005 NZ_NPLZ01000001.1 Protein Homology CDS 579200 581344 . - 0 ID=cds-WP_094887551.1;Parent=gene-CCO53_RS03010;Dbxref=GenBank:WP_094887551.1;Name=WP_094887551.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=CCO53_RS03010;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_094887551.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 581317 581727 . - . ID=gene-CCO53_RS03015;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CCO53_RS03015;old_locus_tag=CCO53_03010 NZ_NPLZ01000001.1 Protein Homology CDS 581317 581727 . - 0 ID=cds-WP_001275401.1;Parent=gene-CCO53_RS03015;Dbxref=GenBank:WP_001275401.1;Name=WP_001275401.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=CCO53_RS03015;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275401.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 581724 581969 . - . ID=gene-CCO53_RS03020;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=CCO53_RS03020;old_locus_tag=CCO53_03015 NZ_NPLZ01000001.1 Protein Homology CDS 581724 581969 . - 0 ID=cds-WP_000028870.1;Parent=gene-CCO53_RS03020;Dbxref=GenBank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=CCO53_RS03020;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 582241 582672 . - . ID=gene-CCO53_RS03030;Name=CCO53_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03030;old_locus_tag=CCO53_03025 NZ_NPLZ01000001.1 Protein Homology CDS 582241 582672 . - 0 ID=cds-WP_000209809.1;Parent=gene-CCO53_RS03030;Dbxref=GenBank:WP_000209809.1;Name=WP_000209809.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=CCO53_RS03030;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209809.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 582761 584095 . + . ID=gene-CCO53_RS03035;Name=CCO53_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03035;old_locus_tag=CCO53_03030 NZ_NPLZ01000001.1 Protein Homology CDS 582761 584095 . + 0 ID=cds-WP_094887552.1;Parent=gene-CCO53_RS03035;Dbxref=GenBank:WP_094887552.1;Name=WP_094887552.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=CCO53_RS03035;product=PLP-dependent aminotransferase family protein;protein_id=WP_094887552.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 584179 584505 . - . ID=gene-CCO53_RS03040;Name=CCO53_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03040;old_locus_tag=CCO53_03035 NZ_NPLZ01000001.1 Protein Homology CDS 584179 584505 . - 0 ID=cds-WP_001519557.1;Parent=gene-CCO53_RS03040;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=CCO53_RS03040;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 584667 585017 . + . ID=gene-CCO53_RS03045;Name=CCO53_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03045;old_locus_tag=CCO53_03040 NZ_NPLZ01000001.1 Protein Homology CDS 584667 585017 . + 0 ID=cds-WP_000281305.1;Parent=gene-CCO53_RS03045;Dbxref=GenBank:WP_000281305.1;Name=WP_000281305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=CCO53_RS03045;product=DUF2002 family protein;protein_id=WP_000281305.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 585052 585501 . - . ID=gene-CCO53_RS03050;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=CCO53_RS03050;old_locus_tag=CCO53_03045 NZ_NPLZ01000001.1 Protein Homology CDS 585052 585501 . - 0 ID=cds-WP_000492669.1;Parent=gene-CCO53_RS03050;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=CCO53_RS03050;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 586400 586801 . + . ID=gene-CCO53_RS03065;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=CCO53_RS03065;old_locus_tag=CCO53_03060 NZ_NPLZ01000001.1 Protein Homology CDS 586400 586801 . + 0 ID=cds-WP_001051100.1;Parent=gene-CCO53_RS03065;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=CCO53_RS03065;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 586891 587070 . - . ID=gene-CCO53_RS03070;Name=CCO53_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03070;old_locus_tag=CCO53_03065 NZ_NPLZ01000001.1 Protein Homology CDS 586891 587070 . - 0 ID=cds-WP_000494936.1;Parent=gene-CCO53_RS03070;Dbxref=GenBank:WP_000494936.1;Name=WP_000494936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=CCO53_RS03070;product=hypothetical protein;protein_id=WP_000494936.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 587149 587676 . - . ID=gene-CCO53_RS03075;Name=CCO53_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03075;old_locus_tag=CCO53_03070 NZ_NPLZ01000001.1 Protein Homology CDS 587149 587676 . - 0 ID=cds-WP_000022011.1;Parent=gene-CCO53_RS03075;Dbxref=GenBank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=CCO53_RS03075;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 587686 587985 . - . ID=gene-CCO53_RS03080;Name=CCO53_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03080;old_locus_tag=CCO53_03075 NZ_NPLZ01000001.1 Protein Homology CDS 587686 587985 . - 0 ID=cds-WP_000137432.1;Parent=gene-CCO53_RS03080;Dbxref=GenBank:WP_000137432.1;Name=WP_000137432.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=CCO53_RS03080;product=ArsR/SmtB family transcription factor;protein_id=WP_000137432.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 588168 588326 . + . ID=gene-CCO53_RS03085;Name=CCO53_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03085;old_locus_tag=CCO53_03080 NZ_NPLZ01000001.1 Protein Homology CDS 588168 588326 . + 0 ID=cds-WP_000508175.1;Parent=gene-CCO53_RS03085;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=CCO53_RS03085;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 588426 588875 . + . ID=gene-CCO53_RS03095;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=CCO53_RS03095;old_locus_tag=CCO53_03085 NZ_NPLZ01000001.1 Protein Homology CDS 588426 588875 . + 0 ID=cds-WP_000522406.1;Parent=gene-CCO53_RS03095;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=CCO53_RS03095;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 588897 589574 . - . ID=gene-CCO53_RS03100;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=CCO53_RS03100;old_locus_tag=CCO53_03090 NZ_NPLZ01000001.1 Protein Homology CDS 588897 589574 . - 0 ID=cds-WP_000126152.1;Parent=gene-CCO53_RS03100;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=CCO53_RS03100;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 589616 591016 . - . ID=gene-CCO53_RS03105;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=CCO53_RS03105;old_locus_tag=CCO53_03095 NZ_NPLZ01000001.1 Protein Homology CDS 589616 591016 . - 0 ID=cds-WP_000531282.1;Parent=gene-CCO53_RS03105;Dbxref=GenBank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=CCO53_RS03105;product=GABA permease;protein_id=WP_000531282.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 591146 592429 . - . ID=gene-CCO53_RS03110;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=CCO53_RS03110;old_locus_tag=CCO53_03100 NZ_NPLZ01000001.1 Protein Homology CDS 591146 592429 . - 0 ID=cds-WP_001095556.1;Parent=gene-CCO53_RS03110;Dbxref=GenBank:WP_001095556.1;Name=WP_001095556.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=CCO53_RS03110;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001095556.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 592444 593892 . - . ID=gene-CCO53_RS03115;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=CCO53_RS03115;old_locus_tag=CCO53_03105 NZ_NPLZ01000001.1 Protein Homology CDS 592444 593892 . - 0 ID=cds-WP_001176529.1;Parent=gene-CCO53_RS03115;Dbxref=GenBank:WP_001176529.1;Name=WP_001176529.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=CCO53_RS03115;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_001176529.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 593914 595182 . - . ID=gene-CCO53_RS03120;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=CCO53_RS03120;old_locus_tag=CCO53_03110 NZ_NPLZ01000001.1 Protein Homology CDS 593914 595182 . - 0 ID=cds-WP_094887553.1;Parent=gene-CCO53_RS03120;Dbxref=GenBank:WP_094887553.1;Name=WP_094887553.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=CCO53_RS03120;product=L-2-hydroxyglutarate oxidase;protein_id=WP_094887553.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 595208 596185 . - . ID=gene-CCO53_RS03125;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=CCO53_RS03125;old_locus_tag=CCO53_03115 NZ_NPLZ01000001.1 Protein Homology CDS 595208 596185 . - 0 ID=cds-WP_000993100.1;Parent=gene-CCO53_RS03125;Dbxref=GenBank:WP_000993100.1;Name=WP_000993100.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=CCO53_RS03125;product=glutarate dioxygenase GlaH;protein_id=WP_000993100.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 596487 598001 . - . ID=gene-CCO53_RS03135;Name=CCO53_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03135;old_locus_tag=CCO53_03125 NZ_NPLZ01000001.1 Protein Homology CDS 596487 598001 . - 0 ID=cds-WP_000382034.1;Parent=gene-CCO53_RS03135;Dbxref=GenBank:WP_000382034.1;Name=WP_000382034.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=CCO53_RS03135;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382034.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 598012 598446 . - . ID=gene-CCO53_RS03140;Name=CCO53_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03140;old_locus_tag=CCO53_03130 NZ_NPLZ01000001.1 Protein Homology CDS 598012 598446 . - 0 ID=cds-WP_001574835.1;Parent=gene-CCO53_RS03140;Dbxref=GenBank:WP_001574835.1;Name=WP_001574835.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=CCO53_RS03140;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 598458 599435 . - . ID=gene-CCO53_RS03145;Name=CCO53_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03145;old_locus_tag=CCO53_03135 NZ_NPLZ01000001.1 Protein Homology CDS 598458 599435 . - 0 ID=cds-WP_000744413.1;Parent=gene-CCO53_RS03145;Dbxref=GenBank:WP_000744413.1;Name=WP_000744413.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=CCO53_RS03145;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744413.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 599590 600264 . + . ID=gene-CCO53_RS03150;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=CCO53_RS03150;old_locus_tag=CCO53_03140 NZ_NPLZ01000001.1 Protein Homology CDS 599590 600264 . + 0 ID=cds-WP_001237934.1;Parent=gene-CCO53_RS03150;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=CCO53_RS03150;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 600251 601666 . + . ID=gene-CCO53_RS03155;Name=CCO53_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03155;old_locus_tag=CCO53_03145 NZ_NPLZ01000001.1 Protein Homology CDS 600251 601666 . + 0 ID=cds-WP_000872338.1;Parent=gene-CCO53_RS03155;Dbxref=GenBank:WP_000872338.1;Name=WP_000872338.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=CCO53_RS03155;product=sensor histidine kinase;protein_id=WP_000872338.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 601799 602812 . + . ID=gene-CCO53_RS03160;Name=CCO53_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03160;old_locus_tag=CCO53_03150 NZ_NPLZ01000001.1 Protein Homology CDS 601799 602812 . + 0 ID=cds-WP_001059351.1;Parent=gene-CCO53_RS03160;Dbxref=GenBank:WP_001059351.1;Name=WP_001059351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=CCO53_RS03160;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_001059351.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 603534 604430 . - . ID=gene-CCO53_RS03165;Name=CCO53_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03165;old_locus_tag=CCO53_03155 NZ_NPLZ01000001.1 Protein Homology CDS 603534 604430 . - 0 ID=cds-WP_000701514.1;Parent=gene-CCO53_RS03165;Dbxref=GenBank:WP_000701514.1;Name=WP_000701514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=CCO53_RS03165;product=antimicrobial resistance protein Mig-14;protein_id=WP_000701514.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 604724 605653 . - . ID=gene-CCO53_RS03175;Name=CCO53_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03175;old_locus_tag=CCO53_03165 NZ_NPLZ01000001.1 Protein Homology CDS 604724 605653 . - 0 ID=cds-WP_023204262.1;Parent=gene-CCO53_RS03175;Dbxref=GenBank:WP_023204262.1;Name=WP_023204262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=CCO53_RS03175;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_023204262.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq pseudogene 606227 606484 . + . ID=gene-CCO53_RS24235;Name=CCO53_RS24235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24235;old_locus_tag=CCO53_03175;partial=true;pseudo=true;start_range=.,606227 NZ_NPLZ01000001.1 Protein Homology CDS 606227 606484 . + 0 ID=cds-CCO53_RS24235;Parent=gene-CCO53_RS24235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592083.1;locus_tag=CCO53_RS24235;partial=true;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;pseudo=true;start_range=.,606227;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 606751 607857 . - . ID=gene-CCO53_RS03190;Name=CCO53_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03190;old_locus_tag=CCO53_03180 NZ_NPLZ01000001.1 Protein Homology CDS 606751 607857 . - 0 ID=cds-WP_058331162.1;Parent=gene-CCO53_RS03190;Dbxref=GenBank:WP_058331162.1;Name=WP_058331162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024420.6;locus_tag=CCO53_RS03190;product=protein NO VEIN domain-containing protein;protein_id=WP_058331162.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 608002 608514 . - . ID=gene-CCO53_RS23925;Name=CCO53_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23925 NZ_NPLZ01000001.1 Protein Homology CDS 608002 608514 . - 0 ID=cds-WP_331251461.1;Parent=gene-CCO53_RS23925;Dbxref=GenBank:WP_331251461.1;Name=WP_331251461.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=CCO53_RS23925;product=tyrosine-type recombinase/integrase;protein_id=WP_331251461.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq pseudogene 608671 609255 . - . ID=gene-CCO53_RS23930;Name=CCO53_RS23930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23930;partial=true;pseudo=true;start_range=.,608671 NZ_NPLZ01000001.1 Protein Homology CDS 608671 609255 . - 0 ID=cds-CCO53_RS23930;Parent=gene-CCO53_RS23930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449149.1;locus_tag=CCO53_RS23930;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;start_range=.,608671;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 609582 610607 . - . ID=gene-CCO53_RS03200;Name=CCO53_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03200;old_locus_tag=CCO53_03190 NZ_NPLZ01000001.1 Protein Homology CDS 609582 610607 . - 0 ID=cds-WP_001536726.1;Parent=gene-CCO53_RS03200;Dbxref=GenBank:WP_001536726.1;Name=WP_001536726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461666.1;locus_tag=CCO53_RS03200;product=site-specific integrase;protein_id=WP_001536726.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 610611 611243 . - . ID=gene-CCO53_RS03205;Name=CCO53_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03205;old_locus_tag=CCO53_03195 NZ_NPLZ01000001.1 Protein Homology CDS 610611 611243 . - 0 ID=cds-WP_000052559.1;Parent=gene-CCO53_RS03205;Dbxref=GenBank:WP_000052559.1;Name=WP_000052559.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461665.1;locus_tag=CCO53_RS03205;product=helix-turn-helix domain-containing protein;protein_id=WP_000052559.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 611360 611599 . + . ID=gene-CCO53_RS03210;Name=CCO53_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03210;old_locus_tag=CCO53_03200 NZ_NPLZ01000001.1 Protein Homology CDS 611360 611599 . + 0 ID=cds-WP_000102104.1;Parent=gene-CCO53_RS03210;Dbxref=GenBank:WP_000102104.1;Name=WP_000102104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461664.1;locus_tag=CCO53_RS03210;product=hypothetical protein;protein_id=WP_000102104.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 611635 612144 . + . ID=gene-CCO53_RS03215;Name=CCO53_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03215;old_locus_tag=CCO53_03205 NZ_NPLZ01000001.1 Protein Homology CDS 611635 612144 . + 0 ID=cds-WP_000460862.1;Parent=gene-CCO53_RS03215;Dbxref=GenBank:WP_000460862.1;Name=WP_000460862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461663.1;locus_tag=CCO53_RS03215;product=phage regulatory CII family protein;protein_id=WP_000460862.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 612152 612385 . + . ID=gene-CCO53_RS03220;Name=CCO53_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03220;old_locus_tag=CCO53_03210 NZ_NPLZ01000001.1 Protein Homology CDS 612152 612385 . + 0 ID=cds-WP_000957775.1;Parent=gene-CCO53_RS03220;Dbxref=GenBank:WP_000957775.1;Name=WP_000957775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461662.1;locus_tag=CCO53_RS03220;product=phage filamentation protein Fil family protein;protein_id=WP_000957775.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 612333 612791 . - . ID=gene-CCO53_RS03225;Name=CCO53_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03225;old_locus_tag=CCO53_03215 NZ_NPLZ01000001.1 Protein Homology CDS 612333 612791 . - 0 ID=cds-WP_000166366.1;Parent=gene-CCO53_RS03225;Dbxref=GenBank:WP_000166366.1;Name=WP_000166366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461661.1;locus_tag=CCO53_RS03225;product=hypothetical protein;protein_id=WP_000166366.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 613011 613352 . + . ID=gene-CCO53_RS03230;Name=CCO53_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03230;old_locus_tag=CCO53_03220 NZ_NPLZ01000001.1 Protein Homology CDS 613011 613352 . + 0 ID=cds-WP_000963195.1;Parent=gene-CCO53_RS03230;Dbxref=GenBank:WP_000963195.1;Name=WP_000963195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461660.1;locus_tag=CCO53_RS03230;product=DUF5347 domain-containing protein;protein_id=WP_000963195.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 613420 613653 . + . ID=gene-CCO53_RS03235;Name=CCO53_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03235;old_locus_tag=CCO53_03225 NZ_NPLZ01000001.1 Protein Homology CDS 613420 613653 . + 0 ID=cds-WP_001244234.1;Parent=gene-CCO53_RS03235;Dbxref=GenBank:WP_001244234.1;Name=WP_001244234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461659.1;locus_tag=CCO53_RS03235;product=DUF2732 domain-containing protein;protein_id=WP_001244234.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 613653 613880 . + . ID=gene-CCO53_RS03240;Name=CCO53_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03240;old_locus_tag=CCO53_03230 NZ_NPLZ01000001.1 Protein Homology CDS 613653 613880 . + 0 ID=cds-WP_000785509.1;Parent=gene-CCO53_RS03240;Dbxref=GenBank:WP_000785509.1;Name=WP_000785509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461658.1;locus_tag=CCO53_RS03240;product=TraR/DksA family transcriptional regulator;protein_id=WP_000785509.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 613877 614734 . + . ID=gene-CCO53_RS03245;Name=CCO53_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03245;old_locus_tag=CCO53_03235 NZ_NPLZ01000001.1 Protein Homology CDS 613877 614734 . + 0 ID=cds-WP_000104122.1;Parent=gene-CCO53_RS03245;Dbxref=GenBank:WP_000104122.1;Name=WP_000104122.1;Ontology_term=GO:0032259,GO:0032775,GO:0008757,GO:0009007,GO:0043565,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,sequence-specific DNA binding|0043565||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA,obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461657.1;locus_tag=CCO53_RS03245;product=DNA adenine methylase;protein_id=WP_000104122.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 614725 617136 . + . ID=gene-CCO53_RS03250;Name=CCO53_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03250;old_locus_tag=CCO53_03240 NZ_NPLZ01000001.1 Protein Homology CDS 614725 617136 . + 0 ID=cds-WP_080160386.1;Parent=gene-CCO53_RS03250;Dbxref=GenBank:WP_080160386.1;Name=WP_080160386.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406336.1;locus_tag=CCO53_RS03250;product=replication endonuclease;protein_id=WP_080160386.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 617291 617479 . + . ID=gene-CCO53_RS03255;Name=CCO53_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03255;old_locus_tag=CCO53_03245 NZ_NPLZ01000001.1 Protein Homology CDS 617291 617479 . + 0 ID=cds-WP_001154444.1;Parent=gene-CCO53_RS03255;Dbxref=GenBank:WP_001154444.1;Name=WP_001154444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406337.1;locus_tag=CCO53_RS03255;product=hypothetical protein;protein_id=WP_001154444.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 617491 617724 . + . ID=gene-CCO53_RS03260;Name=CCO53_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03260;old_locus_tag=CCO53_03250 NZ_NPLZ01000001.1 Protein Homology CDS 617491 617724 . + 0 ID=cds-WP_023225963.1;Parent=gene-CCO53_RS03260;Dbxref=GenBank:WP_023225963.1;Name=WP_023225963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226016.1;locus_tag=CCO53_RS03260;product=DinI-like family protein;protein_id=WP_023225963.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 617853 618593 . - . ID=gene-CCO53_RS03265;Name=CCO53_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03265;old_locus_tag=CCO53_03255 NZ_NPLZ01000001.1 Protein Homology CDS 617853 618593 . - 0 ID=cds-WP_023238320.1;Parent=gene-CCO53_RS03265;Dbxref=GenBank:WP_023238320.1;Name=WP_023238320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215882.1;locus_tag=CCO53_RS03265;product=DUF4145 domain-containing protein;protein_id=WP_023238320.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 618952 619197 . + . ID=gene-CCO53_RS03270;Name=CCO53_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03270;old_locus_tag=CCO53_03260 NZ_NPLZ01000001.1 Protein Homology CDS 618952 619197 . + 0 ID=cds-WP_023260023.1;Parent=gene-CCO53_RS03270;Dbxref=GenBank:WP_023260023.1;Name=WP_023260023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687979.1;locus_tag=CCO53_RS03270;product=hypothetical protein;protein_id=WP_023260023.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 619207 620064 . + . ID=gene-CCO53_RS03275;Name=CCO53_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03275;old_locus_tag=CCO53_03265 NZ_NPLZ01000001.1 Protein Homology CDS 619207 620064 . + 0 ID=cds-WP_080160387.1;Parent=gene-CCO53_RS03275;Dbxref=GenBank:WP_080160387.1;Name=WP_080160387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000490524.1;locus_tag=CCO53_RS03275;product=LPO_1073/Vpar_1526 family protein;protein_id=WP_080160387.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 620086 621117 . - . ID=gene-CCO53_RS03280;Name=CCO53_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03280;old_locus_tag=CCO53_03270 NZ_NPLZ01000001.1 Protein Homology CDS 620086 621117 . - 0 ID=cds-WP_080160388.1;Parent=gene-CCO53_RS03280;Dbxref=GenBank:WP_080160388.1;Name=WP_080160388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001573372.1;locus_tag=CCO53_RS03280;product=phage portal protein;protein_id=WP_080160388.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 621117 622883 . - . ID=gene-CCO53_RS03285;Name=CCO53_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03285;old_locus_tag=CCO53_03275 NZ_NPLZ01000001.1 Protein Homology CDS 621117 622883 . - 0 ID=cds-WP_080160389.1;Parent=gene-CCO53_RS03285;Dbxref=GenBank:WP_080160389.1;Name=WP_080160389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226020.1;locus_tag=CCO53_RS03285;product=terminase ATPase subunit family protein;protein_id=WP_080160389.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 623026 623859 . + . ID=gene-CCO53_RS03290;Name=CCO53_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03290;old_locus_tag=CCO53_03280 NZ_NPLZ01000001.1 Protein Homology CDS 623026 623859 . + 0 ID=cds-WP_080068599.1;Parent=gene-CCO53_RS03290;Dbxref=GenBank:WP_080068599.1;Name=WP_080068599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461649.1;locus_tag=CCO53_RS03290;product=GPO family capsid scaffolding protein;protein_id=WP_080068599.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 623876 624940 . + . ID=gene-CCO53_RS03295;Name=CCO53_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03295;old_locus_tag=CCO53_03285 NZ_NPLZ01000001.1 Protein Homology CDS 623876 624940 . + 0 ID=cds-WP_080160390.1;Parent=gene-CCO53_RS03295;Dbxref=GenBank:WP_080160390.1;Name=WP_080160390.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714844.1;locus_tag=CCO53_RS03295;product=phage major capsid protein%2C P2 family;protein_id=WP_080160390.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 624944 625594 . + . ID=gene-CCO53_RS03300;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=CCO53_RS03300;old_locus_tag=CCO53_03290 NZ_NPLZ01000001.1 Protein Homology CDS 624944 625594 . + 0 ID=cds-WP_001397653.1;Parent=gene-CCO53_RS03300;Dbxref=GenBank:WP_001397653.1;Name=WP_001397653.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461647.1;locus_tag=CCO53_RS03300;product=phage terminase small subunit;protein_id=WP_001397653.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 625688 626152 . + . ID=gene-CCO53_RS03305;Name=CCO53_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03305;old_locus_tag=CCO53_03295 NZ_NPLZ01000001.1 Protein Homology CDS 625688 626152 . + 0 ID=cds-WP_010835209.1;Parent=gene-CCO53_RS03305;Dbxref=GenBank:WP_010835209.1;Name=WP_010835209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461646.1;locus_tag=CCO53_RS03305;product=head completion/stabilization protein;protein_id=WP_010835209.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 626152 626355 . + . ID=gene-CCO53_RS03310;Name=CCO53_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03310;old_locus_tag=CCO53_03300 NZ_NPLZ01000001.1 Protein Homology CDS 626152 626355 . + 0 ID=cds-WP_032636632.1;Parent=gene-CCO53_RS03310;Dbxref=GenBank:WP_032636632.1;Name=WP_032636632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461645.1;locus_tag=CCO53_RS03310;product=tail protein X;protein_id=WP_032636632.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 626359 626574 . + . ID=gene-CCO53_RS03315;Name=CCO53_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03315;old_locus_tag=CCO53_03305 NZ_NPLZ01000001.1 Protein Homology CDS 626359 626574 . + 0 ID=cds-WP_000171565.1;Parent=gene-CCO53_RS03315;Dbxref=GenBank:WP_000171565.1;Name=WP_000171565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461644.1;locus_tag=CCO53_RS03315;product=HP1 family phage holin;protein_id=WP_000171565.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 626555 627064 . + . ID=gene-CCO53_RS03320;Name=CCO53_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03320;old_locus_tag=CCO53_03310 NZ_NPLZ01000001.1 Protein Homology CDS 626555 627064 . + 0 ID=cds-WP_080160391.1;Parent=gene-CCO53_RS03320;Dbxref=GenBank:WP_080160391.1;Name=WP_080160391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077486.1;locus_tag=CCO53_RS03320;product=lysozyme;protein_id=WP_080160391.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 627069 627446 . + . ID=gene-CCO53_RS03325;Name=CCO53_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03325;old_locus_tag=CCO53_03315 NZ_NPLZ01000001.1 Protein Homology CDS 627069 627446 . + 0 ID=cds-WP_000731036.1;Parent=gene-CCO53_RS03325;Dbxref=GenBank:WP_000731036.1;Name=WP_000731036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_079800986.1;locus_tag=CCO53_RS03325;product=DNZ54_00345 family protein;protein_id=WP_000731036.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 627443 627871 . + . ID=gene-CCO53_RS03330;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=CCO53_RS03330;old_locus_tag=CCO53_03320 NZ_NPLZ01000001.1 Protein Homology CDS 627443 627871 . + 0 ID=cds-WP_167850420.1;Parent=gene-CCO53_RS03330;Dbxref=GenBank:WP_167850420.1;Name=WP_167850420.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461642.1;locus_tag=CCO53_RS03330;product=Rz-like lysis system protein LysB;protein_id=WP_167850420.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 627756 628004 . + . ID=gene-CCO53_RS23935;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO53_RS23935;old_locus_tag=CCO53_03325 NZ_NPLZ01000001.1 Protein Homology CDS 627756 628004 . + 0 ID=cds-WP_237141205.1;Parent=gene-CCO53_RS23935;Dbxref=GenBank:WP_237141205.1;Name=WP_237141205.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461641.1;locus_tag=CCO53_RS23935;product=Rz1-like lysis system protein LysC;protein_id=WP_237141205.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 627967 628398 . + . ID=gene-CCO53_RS03340;Name=CCO53_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03340;old_locus_tag=CCO53_03330 NZ_NPLZ01000001.1 Protein Homology CDS 627967 628398 . + 0 ID=cds-WP_080160393.1;Parent=gene-CCO53_RS03340;Dbxref=GenBank:WP_080160393.1;Name=WP_080160393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461640.1;locus_tag=CCO53_RS03340;product=phage tail protein;protein_id=WP_080160393.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 628391 628840 . + . ID=gene-CCO53_RS03345;Name=CCO53_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03345;old_locus_tag=CCO53_03335 NZ_NPLZ01000001.1 Protein Homology CDS 628391 628840 . + 0 ID=cds-WP_080160394.1;Parent=gene-CCO53_RS03345;Dbxref=GenBank:WP_080160394.1;Name=WP_080160394.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554841.1;locus_tag=CCO53_RS03345;product=phage virion morphogenesis protein;protein_id=WP_080160394.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 628842 629537 . - . ID=gene-CCO53_RS03350;Name=CCO53_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03350;old_locus_tag=CCO53_03340 NZ_NPLZ01000001.1 Protein Homology CDS 628842 629537 . - 0 ID=cds-WP_080160395.1;Parent=gene-CCO53_RS03350;Dbxref=GenBank:WP_080160395.1;Name=WP_080160395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235545.1;locus_tag=CCO53_RS03350;product=DUF6216 family protein;protein_id=WP_080160395.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 629638 630216 . + . ID=gene-CCO53_RS03355;Name=CCO53_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03355;old_locus_tag=CCO53_03345 NZ_NPLZ01000001.1 Protein Homology CDS 629638 630216 . + 0 ID=cds-WP_080160396.1;Parent=gene-CCO53_RS03355;Dbxref=GenBank:WP_080160396.1;Name=WP_080160396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461638.1;locus_tag=CCO53_RS03355;product=phage baseplate assembly protein V;protein_id=WP_080160396.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 630213 630572 . + . ID=gene-CCO53_RS03360;Name=CCO53_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03360;old_locus_tag=CCO53_03350 NZ_NPLZ01000001.1 Protein Homology CDS 630213 630572 . + 0 ID=cds-WP_000177484.1;Parent=gene-CCO53_RS03360;Dbxref=GenBank:WP_000177484.1;Name=WP_000177484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461637.1;locus_tag=CCO53_RS03360;product=GPW/gp25 family protein;protein_id=WP_000177484.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 630559 631467 . + . ID=gene-CCO53_RS03365;Name=CCO53_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03365;old_locus_tag=CCO53_03355 NZ_NPLZ01000001.1 Protein Homology CDS 630559 631467 . + 0 ID=cds-WP_000268273.1;Parent=gene-CCO53_RS03365;Dbxref=GenBank:WP_000268273.1;Name=WP_000268273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=CCO53_RS03365;product=baseplate assembly protein;protein_id=WP_000268273.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 631460 632065 . + . ID=gene-CCO53_RS03370;Name=CCO53_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03370;old_locus_tag=CCO53_03360 NZ_NPLZ01000001.1 Protein Homology CDS 631460 632065 . + 0 ID=cds-WP_001086804.1;Parent=gene-CCO53_RS03370;Dbxref=GenBank:WP_001086804.1;Name=WP_001086804.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=CCO53_RS03370;product=phage tail protein I;protein_id=WP_001086804.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 632062 633828 . + . ID=gene-CCO53_RS03375;Name=CCO53_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03375;old_locus_tag=CCO53_03365 NZ_NPLZ01000001.1 Protein Homology CDS 632062 633828 . + 0 ID=cds-WP_010835202.1;Parent=gene-CCO53_RS03375;Dbxref=GenBank:WP_010835202.1;Name=WP_010835202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835202.1;locus_tag=CCO53_RS03375;product=phage tail protein;protein_id=WP_010835202.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 633831 634358 . + . ID=gene-CCO53_RS03380;Name=CCO53_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03380;old_locus_tag=CCO53_03370 NZ_NPLZ01000001.1 Protein Homology CDS 633831 634358 . + 0 ID=cds-WP_000680167.1;Parent=gene-CCO53_RS03380;Dbxref=GenBank:WP_000680167.1;Name=WP_000680167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461177.1;locus_tag=CCO53_RS03380;product=tail fiber assembly protein;protein_id=WP_000680167.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 634489 635661 . + . ID=gene-CCO53_RS03385;Name=CCO53_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03385;old_locus_tag=CCO53_03375 NZ_NPLZ01000001.1 Protein Homology CDS 634489 635661 . + 0 ID=cds-WP_000046103.1;Parent=gene-CCO53_RS03385;Dbxref=GenBank:WP_000046103.1;Name=WP_000046103.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=CCO53_RS03385;product=phage tail sheath protein;protein_id=WP_000046103.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 635671 636186 . + . ID=gene-CCO53_RS03390;Name=CCO53_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03390;old_locus_tag=CCO53_03380 NZ_NPLZ01000001.1 Protein Homology CDS 635671 636186 . + 0 ID=cds-WP_080160397.1;Parent=gene-CCO53_RS03390;Dbxref=GenBank:WP_080160397.1;Name=WP_080160397.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=CCO53_RS03390;product=phage major tail tube protein;protein_id=WP_080160397.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 636241 636543 . + . ID=gene-CCO53_RS03395;Name=CCO53_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03395;old_locus_tag=CCO53_03385 NZ_NPLZ01000001.1 Protein Homology CDS 636241 636543 . + 0 ID=cds-WP_001280962.1;Parent=gene-CCO53_RS03395;Dbxref=GenBank:WP_001280962.1;Name=WP_001280962.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=CCO53_RS03395;product=phage tail assembly protein;protein_id=WP_001280962.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 636558 636677 . + . ID=gene-CCO53_RS03400;Name=CCO53_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03400;old_locus_tag=CCO53_03390 NZ_NPLZ01000001.1 Protein Homology CDS 636558 636677 . + 0 ID=cds-WP_000763316.1;Parent=gene-CCO53_RS03400;Dbxref=GenBank:WP_000763316.1;Name=WP_000763316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=CCO53_RS03400;product=GpE family phage tail protein;protein_id=WP_000763316.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 636670 639477 . + . ID=gene-CCO53_RS03405;Name=CCO53_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03405;old_locus_tag=CCO53_03395 NZ_NPLZ01000001.1 Protein Homology CDS 636670 639477 . + 0 ID=cds-WP_080160398.1;Parent=gene-CCO53_RS03405;Dbxref=GenBank:WP_080160398.1;Name=WP_080160398.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461625.1;locus_tag=CCO53_RS03405;product=phage tail tape measure protein;protein_id=WP_080160398.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 639474 639959 . + . ID=gene-CCO53_RS03410;Name=CCO53_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03410;old_locus_tag=CCO53_03400 NZ_NPLZ01000001.1 Protein Homology CDS 639474 639959 . + 0 ID=cds-WP_000980409.1;Parent=gene-CCO53_RS03410;Dbxref=GenBank:WP_000980409.1;Name=WP_000980409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=CCO53_RS03410;product=phage tail protein;protein_id=WP_000980409.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 639956 641056 . + . ID=gene-CCO53_RS03415;Name=CCO53_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03415;old_locus_tag=CCO53_03405 NZ_NPLZ01000001.1 Protein Homology CDS 639956 641056 . + 0 ID=cds-WP_080160399.1;Parent=gene-CCO53_RS03415;Dbxref=GenBank:WP_080160399.1;Name=WP_080160399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=CCO53_RS03415;product=phage late control D family protein;protein_id=WP_080160399.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 641125 641343 . + . ID=gene-CCO53_RS03420;Name=CCO53_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03420;old_locus_tag=CCO53_03410 NZ_NPLZ01000001.1 Protein Homology CDS 641125 641343 . + 0 ID=cds-WP_000980498.1;Parent=gene-CCO53_RS03420;Dbxref=GenBank:WP_000980498.1;Name=WP_000980498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=CCO53_RS03420;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000980498.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 641461 641823 . - . ID=gene-CCO53_RS03425;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CCO53_RS03425;old_locus_tag=CCO53_03415 NZ_NPLZ01000001.1 cmsearch tmRNA 641461 641823 . - . ID=rna-CCO53_RS03425;Parent=gene-CCO53_RS03425;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS03425;product=transfer-messenger RNA NZ_NPLZ01000001.1 cmsearch exon 641461 641823 . - . ID=exon-CCO53_RS03425-1;Parent=rna-CCO53_RS03425;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS03425;product=transfer-messenger RNA NZ_NPLZ01000001.1 RefSeq gene 641895 643058 . - . ID=gene-CCO53_RS03430;Name=CCO53_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03430;old_locus_tag=CCO53_03420 NZ_NPLZ01000001.1 Protein Homology CDS 641895 643058 . - 0 ID=cds-WP_000342601.1;Parent=gene-CCO53_RS03430;Dbxref=GenBank:WP_000342601.1;Name=WP_000342601.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=CCO53_RS03430;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_000342601.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 643066 645246 . - . ID=gene-CCO53_RS03435;Name=CCO53_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03435;old_locus_tag=CCO53_03425 NZ_NPLZ01000001.1 Protein Homology CDS 643066 645246 . - 0 ID=cds-WP_094887555.1;Parent=gene-CCO53_RS03435;Dbxref=GenBank:WP_094887555.1;Name=WP_094887555.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=CCO53_RS03435;product=type I secretion system permease/ATPase;protein_id=WP_094887555.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 645243 646652 . - . ID=gene-CCO53_RS03440;Name=CCO53_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03440;old_locus_tag=CCO53_03430 NZ_NPLZ01000001.1 Protein Homology CDS 645243 646652 . - 0 ID=cds-WP_094887556.1;Parent=gene-CCO53_RS03440;Dbxref=GenBank:WP_094887556.1;Name=WP_094887556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=CCO53_RS03440;product=TolC family outer membrane protein;protein_id=WP_094887556.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 646717 658191 . - . ID=gene-CCO53_RS03445;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=CCO53_RS03445;old_locus_tag=CCO53_03435 NZ_NPLZ01000001.1 Protein Homology CDS 646717 658191 . - 0 ID=cds-WP_094887557.1;Parent=gene-CCO53_RS03445;Dbxref=GenBank:WP_094887557.1;Name=WP_094887557.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=CCO53_RS03445;product=biofilm-associated protein BapA;protein_id=WP_094887557.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 658811 659293 . - . ID=gene-CCO53_RS03450;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CCO53_RS03450;old_locus_tag=CCO53_03440 NZ_NPLZ01000001.1 Protein Homology CDS 658811 659293 . - 0 ID=cds-WP_001518569.1;Parent=gene-CCO53_RS03450;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=CCO53_RS03450;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 659482 659919 . + . ID=gene-CCO53_RS03455;Name=CCO53_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03455;old_locus_tag=CCO53_03445 NZ_NPLZ01000001.1 Protein Homology CDS 659482 659919 . + 0 ID=cds-WP_001537508.1;Parent=gene-CCO53_RS03455;Dbxref=GenBank:WP_001537508.1;Name=WP_001537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=CCO53_RS03455;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001537508.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 659909 660199 . + . ID=gene-CCO53_RS03460;Name=CCO53_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03460;old_locus_tag=CCO53_03450 NZ_NPLZ01000001.1 Protein Homology CDS 659909 660199 . + 0 ID=cds-WP_001112990.1;Parent=gene-CCO53_RS03460;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=CCO53_RS03460;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 660365 660703 . - . ID=gene-CCO53_RS03465;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=CCO53_RS03465;old_locus_tag=CCO53_03455 NZ_NPLZ01000001.1 Protein Homology CDS 660365 660703 . - 0 ID=cds-WP_001203445.1;Parent=gene-CCO53_RS03465;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=CCO53_RS03465;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 660852 662513 . - . ID=gene-CCO53_RS03470;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CCO53_RS03470;old_locus_tag=CCO53_03460 NZ_NPLZ01000001.1 Protein Homology CDS 660852 662513 . - 0 ID=cds-WP_000880965.1;Parent=gene-CCO53_RS03470;Dbxref=GenBank:WP_000880965.1;Name=WP_000880965.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=CCO53_RS03470;product=DNA repair protein RecN;protein_id=WP_000880965.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 662599 663477 . - . ID=gene-CCO53_RS03475;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=CCO53_RS03475;old_locus_tag=CCO53_03465 NZ_NPLZ01000001.1 Protein Homology CDS 662599 663477 . - 0 ID=cds-WP_001059155.1;Parent=gene-CCO53_RS03475;Dbxref=GenBank:WP_001059155.1;Name=WP_001059155.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=CCO53_RS03475;product=NAD(+) kinase;protein_id=WP_001059155.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 663601 664191 . + . ID=gene-CCO53_RS03485;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CCO53_RS03485;old_locus_tag=CCO53_03475 NZ_NPLZ01000001.1 Protein Homology CDS 663601 664191 . + 0 ID=cds-WP_001518875.1;Parent=gene-CCO53_RS03485;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=CCO53_RS03485;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 664226 664831 . - . ID=gene-CCO53_RS03490;Name=CCO53_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03490;old_locus_tag=CCO53_03480 NZ_NPLZ01000001.1 Protein Homology CDS 664226 664831 . - 0 ID=cds-WP_001287924.1;Parent=gene-CCO53_RS03490;Dbxref=GenBank:WP_001287924.1;Name=WP_001287924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=CCO53_RS03490;product=DUF6630 family protein;protein_id=WP_001287924.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 664952 666238 . - . ID=gene-CCO53_RS03495;Name=CCO53_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03495;old_locus_tag=CCO53_03485 NZ_NPLZ01000001.1 Protein Homology CDS 664952 666238 . - 0 ID=cds-WP_130559217.1;Parent=gene-CCO53_RS03495;Dbxref=GenBank:WP_130559217.1;Name=WP_130559217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=CCO53_RS03495;product=HlyC/CorC family transporter;protein_id=WP_130559217.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 666258 667049 . - . ID=gene-CCO53_RS03500;Name=CCO53_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03500;old_locus_tag=CCO53_03490 NZ_NPLZ01000001.1 Protein Homology CDS 666258 667049 . - 0 ID=cds-WP_001537507.1;Parent=gene-CCO53_RS03500;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=CCO53_RS03500;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 667215 668576 . + . ID=gene-CCO53_RS03510;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CCO53_RS03510;old_locus_tag=CCO53_03500 NZ_NPLZ01000001.1 Protein Homology CDS 667215 668576 . + 0 ID=cds-WP_000460052.1;Parent=gene-CCO53_RS03510;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=CCO53_RS03510;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 668890 669138 . + . ID=gene-CCO53_RS03515;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CCO53_RS03515;old_locus_tag=CCO53_03505 NZ_NPLZ01000001.1 Protein Homology CDS 668890 669138 . + 0 ID=cds-WP_000256453.1;Parent=gene-CCO53_RS03515;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=CCO53_RS03515;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 669157 669705 . + . ID=gene-CCO53_RS03520;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CCO53_RS03520;old_locus_tag=CCO53_03510 NZ_NPLZ01000001.1 Protein Homology CDS 669157 669705 . + 0 ID=cds-WP_000043266.1;Parent=gene-CCO53_RS03520;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=CCO53_RS03520;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 669750 670517 . + . ID=gene-CCO53_RS03525;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CCO53_RS03525;old_locus_tag=CCO53_03515 NZ_NPLZ01000001.1 Protein Homology CDS 669750 670517 . + 0 ID=cds-WP_000469804.1;Parent=gene-CCO53_RS03525;Dbxref=GenBank:WP_000469804.1;Name=WP_000469804.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=CCO53_RS03525;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469804.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 670558 670905 . + . ID=gene-CCO53_RS03530;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CCO53_RS03530;old_locus_tag=CCO53_03520 NZ_NPLZ01000001.1 Protein Homology CDS 670558 670905 . + 0 ID=cds-WP_000065257.1;Parent=gene-CCO53_RS03530;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=CCO53_RS03530;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 671062 672282 . - . ID=gene-CCO53_RS03535;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=CCO53_RS03535;old_locus_tag=CCO53_03525 NZ_NPLZ01000001.1 Protein Homology CDS 671062 672282 . - 0 ID=cds-WP_094887558.1;Parent=gene-CCO53_RS03535;Dbxref=GenBank:WP_094887558.1;Name=WP_094887558.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=CCO53_RS03535;product=diguanylate cyclase DgcN;protein_id=WP_094887558.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 672275 672793 . - . ID=gene-CCO53_RS03540;Name=CCO53_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03540;old_locus_tag=CCO53_03530 NZ_NPLZ01000001.1 Protein Homology CDS 672275 672793 . - 0 ID=cds-WP_001212379.1;Parent=gene-CCO53_RS03540;Dbxref=GenBank:WP_001212379.1;Name=WP_001212379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=CCO53_RS03540;product=YfiR family protein;protein_id=WP_001212379.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 673233 674303 . + . ID=gene-CCO53_RS03545;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=CCO53_RS03545;old_locus_tag=CCO53_03535 NZ_NPLZ01000001.1 Protein Homology CDS 673233 674303 . + 0 ID=cds-WP_001168062.1;Parent=gene-CCO53_RS03545;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=CCO53_RS03545;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 674313 675434 . + . ID=gene-CCO53_RS03550;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=CCO53_RS03550;old_locus_tag=CCO53_03540 NZ_NPLZ01000001.1 Protein Homology CDS 674313 675434 . + 0 ID=cds-WP_000225191.1;Parent=gene-CCO53_RS03550;Dbxref=GenBank:WP_000225191.1;Name=WP_000225191.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=CCO53_RS03550;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225191.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 675492 676400 . + . ID=gene-CCO53_RS03555;Name=CCO53_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03555;old_locus_tag=CCO53_03545 NZ_NPLZ01000001.1 Protein Homology CDS 675492 676400 . + 0 ID=cds-WP_058331159.1;Parent=gene-CCO53_RS03555;Dbxref=GenBank:WP_058331159.1;Name=WP_058331159.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=CCO53_RS03555;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_058331159.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 676361 677521 . - . ID=gene-CCO53_RS03560;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=CCO53_RS03560;old_locus_tag=CCO53_03550 NZ_NPLZ01000001.1 Protein Homology CDS 676361 677521 . - 0 ID=cds-WP_058331158.1;Parent=gene-CCO53_RS03560;Dbxref=GenBank:WP_058331158.1;Name=WP_058331158.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=CCO53_RS03560;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_058331158.1;transl_table=11 NZ_NPLZ01000001.1 cmsearch sequence_feature 677544 677669 . - . ID=id-NZ_NPLZ01000001.1:677544..677669;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPLZ01000001.1 RefSeq gene 677621 677668 . - . ID=gene-CCO53_RS23605;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=CCO53_RS23605 NZ_NPLZ01000001.1 Protein Homology CDS 677621 677668 . - 0 ID=cds-WP_010989056.1;Parent=gene-CCO53_RS23605;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=CCO53_RS23605;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 677772 678110 . - . ID=gene-CCO53_RS03565;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CCO53_RS03565;old_locus_tag=CCO53_03555 NZ_NPLZ01000001.1 Protein Homology CDS 677772 678110 . - 0 ID=cds-WP_000178449.1;Parent=gene-CCO53_RS03565;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=CCO53_RS03565;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 678382 679119 . - . ID=gene-CCO53_RS03570;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=CCO53_RS03570;old_locus_tag=CCO53_03560 NZ_NPLZ01000001.1 Protein Homology CDS 678382 679119 . - 0 ID=cds-WP_000197660.1;Parent=gene-CCO53_RS03570;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=CCO53_RS03570;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 679251 680231 . + . ID=gene-CCO53_RS03575;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=CCO53_RS03575;old_locus_tag=CCO53_03565 NZ_NPLZ01000001.1 Protein Homology CDS 679251 680231 . + 0 ID=cds-WP_000079130.1;Parent=gene-CCO53_RS03575;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=CCO53_RS03575;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 680228 680959 . + . ID=gene-CCO53_RS03580;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=CCO53_RS03580;old_locus_tag=CCO53_03570 NZ_NPLZ01000001.1 Protein Homology CDS 680228 680959 . + 0 ID=cds-WP_000992639.1;Parent=gene-CCO53_RS03580;Dbxref=GenBank:WP_000992639.1;Name=WP_000992639.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=CCO53_RS03580;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992639.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 681089 683662 . + . ID=gene-CCO53_RS03585;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CCO53_RS03585;old_locus_tag=CCO53_03575 NZ_NPLZ01000001.1 Protein Homology CDS 681089 683662 . + 0 ID=cds-WP_001235092.1;Parent=gene-CCO53_RS03585;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=CCO53_RS03585;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11 NZ_NPLZ01000001.1 RefSeq gene 684118 684339 . + . ID=gene-CCO53_RS03595;Name=CCO53_RS03595;end_range=684339,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS03595;old_locus_tag=CCO53_03585;partial=true NZ_NPLZ01000001.1 cmsearch rRNA 684118 684339 . + . ID=rna-CCO53_RS03595;Parent=gene-CCO53_RS03595;Dbxref=RFAM:RF00177;end_range=684339,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS03595;partial=true;product=16S ribosomal RNA NZ_NPLZ01000001.1 cmsearch exon 684118 684339 . + . ID=exon-CCO53_RS03595-1;Parent=rna-CCO53_RS03595;Dbxref=RFAM:RF00177;end_range=684339,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS03595;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPLZ01000010.1 1 199997 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000010.1 RefSeq region 1 199997 . + . ID=NZ_NPLZ01000010.1:1..199997;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000010.1 RefSeq gene 1 231 . + . ID=gene-CCO53_RS16845;Name=CCO53_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16845;old_locus_tag=CCO53_16815;partial=true;start_range=.,1 NZ_NPLZ01000010.1 Protein Homology CDS 1 231 . + 0 ID=cds-WP_371218102.1;Parent=gene-CCO53_RS16845;Dbxref=GenBank:WP_371218102.1;Name=WP_371218102.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO53_RS16845;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_371218102.1;start_range=.,1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 353 1579 . + . ID=gene-CCO53_RS16850;Name=CCO53_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16850;old_locus_tag=CCO53_16820 NZ_NPLZ01000010.1 Protein Homology CDS 353 1579 . + 0 ID=cds-WP_094887758.1;Parent=gene-CCO53_RS16850;Dbxref=GenBank:WP_094887758.1;Name=WP_094887758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=CCO53_RS16850;product=DUF3748 domain-containing protein;protein_id=WP_094887758.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 1581 1913 . - . ID=gene-CCO53_RS16855;Name=CCO53_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16855;old_locus_tag=CCO53_16825 NZ_NPLZ01000010.1 Protein Homology CDS 1581 1913 . - 0 ID=cds-WP_001581211.1;Parent=gene-CCO53_RS16855;Dbxref=GenBank:WP_001581211.1;Name=WP_001581211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=CCO53_RS16855;product=YceK/YidQ family lipoprotein;protein_id=WP_001581211.1;transl_table=11 NZ_NPLZ01000010.1 cmsearch sequence_feature 2156 2229 . + . ID=id-NZ_NPLZ01000010.1:2156..2229;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPLZ01000010.1 RefSeq gene 2223 2636 . + . ID=gene-CCO53_RS16860;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=CCO53_RS16860;old_locus_tag=CCO53_16830 NZ_NPLZ01000010.1 Protein Homology CDS 2223 2636 . + 0 ID=cds-WP_001532742.1;Parent=gene-CCO53_RS16860;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=CCO53_RS16860;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 2746 3174 . + . ID=gene-CCO53_RS16865;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=CCO53_RS16865;old_locus_tag=CCO53_16835 NZ_NPLZ01000010.1 Protein Homology CDS 2746 3174 . + 0 ID=cds-WP_001246919.1;Parent=gene-CCO53_RS16865;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=CCO53_RS16865;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 3363 5024 . + . ID=gene-CCO53_RS16870;Name=CCO53_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16870;old_locus_tag=CCO53_16840 NZ_NPLZ01000010.1 Protein Homology CDS 3363 5024 . + 0 ID=cds-WP_001279793.1;Parent=gene-CCO53_RS16870;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=CCO53_RS16870;product=putative transporter;protein_id=WP_001279793.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 5467 5814 . + . ID=gene-CCO53_RS16875;Name=CCO53_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16875;old_locus_tag=CCO53_16845 NZ_NPLZ01000010.1 Protein Homology CDS 5467 5814 . + 0 ID=cds-WP_000703964.1;Parent=gene-CCO53_RS16875;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=CCO53_RS16875;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 5804 6166 . + . ID=gene-CCO53_RS16880;Name=CCO53_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16880;old_locus_tag=CCO53_16850 NZ_NPLZ01000010.1 Protein Homology CDS 5804 6166 . + 0 ID=cds-WP_001113454.1;Parent=gene-CCO53_RS16880;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=CCO53_RS16880;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 6163 6693 . + . ID=gene-CCO53_RS16885;Name=CCO53_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16885;old_locus_tag=CCO53_16855 NZ_NPLZ01000010.1 Protein Homology CDS 6163 6693 . + 0 ID=cds-WP_094887759.1;Parent=gene-CCO53_RS16885;Dbxref=GenBank:WP_094887759.1;Name=WP_094887759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=CCO53_RS16885;product=radical SAM protein;protein_id=WP_094887759.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 6775 8097 . - . ID=gene-CCO53_RS16890;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=CCO53_RS16890;old_locus_tag=CCO53_16860 NZ_NPLZ01000010.1 Protein Homology CDS 6775 8097 . - 0 ID=cds-WP_023217888.1;Parent=gene-CCO53_RS16890;Dbxref=GenBank:WP_023217888.1;Name=WP_023217888.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=CCO53_RS16890;product=D-serine ammonia-lyase;protein_id=WP_023217888.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 8115 9452 . - . ID=gene-CCO53_RS16895;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=CCO53_RS16895;old_locus_tag=CCO53_16865 NZ_NPLZ01000010.1 Protein Homology CDS 8115 9452 . - 0 ID=cds-WP_000543314.1;Parent=gene-CCO53_RS16895;Dbxref=GenBank:WP_000543314.1;Name=WP_000543314.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=CCO53_RS16895;product=D-serine transporter DsdX;protein_id=WP_000543314.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 9678 10601 . + . ID=gene-CCO53_RS16900;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=CCO53_RS16900;old_locus_tag=CCO53_16870 NZ_NPLZ01000010.1 Protein Homology CDS 9678 10601 . + 0 ID=cds-WP_094887770.1;Parent=gene-CCO53_RS16900;Dbxref=GenBank:WP_094887770.1;Name=WP_094887770.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=CCO53_RS16900;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_094887770.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 10665 11750 . + . ID=gene-CCO53_RS16905;Name=CCO53_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16905;old_locus_tag=CCO53_16875 NZ_NPLZ01000010.1 Protein Homology CDS 10665 11750 . + 0 ID=cds-WP_024146106.1;Parent=gene-CCO53_RS16905;Dbxref=GenBank:WP_024146106.1;Name=WP_024146106.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=CCO53_RS16905;product=cellulase family glycosylhydrolase;protein_id=WP_024146106.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 11677 12861 . - . ID=gene-CCO53_RS16910;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=CCO53_RS16910;old_locus_tag=CCO53_16880 NZ_NPLZ01000010.1 Protein Homology CDS 11677 12861 . - 0 ID=cds-WP_000828744.1;Parent=gene-CCO53_RS16910;Dbxref=GenBank:WP_000828744.1;Name=WP_000828744.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=CCO53_RS16910;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828744.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 13064 13924 . - . ID=gene-CCO53_RS16915;Name=CCO53_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16915;old_locus_tag=CCO53_16885 NZ_NPLZ01000010.1 Protein Homology CDS 13064 13924 . - 0 ID=cds-WP_001531658.1;Parent=gene-CCO53_RS16915;Dbxref=GenBank:WP_001531658.1;Name=WP_001531658.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=CCO53_RS16915;product=DMT family transporter;protein_id=WP_001531658.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 14017 14106 . - . ID=gene-CCO53_RS16920;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=CCO53_RS16920;old_locus_tag=CCO53_16890 NZ_NPLZ01000010.1 Protein Homology CDS 14017 14106 . - 0 ID=cds-WP_000117642.1;Parent=gene-CCO53_RS16920;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=CCO53_RS16920;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq pseudogene 14103 14217 . - . ID=gene-CCO53_RS23710;Name=CCO53_RS23710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23710;pseudo=true NZ_NPLZ01000010.1 Protein Homology CDS 14103 14217 . - 0 ID=cds-CCO53_RS23710;Parent=gene-CCO53_RS23710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=CCO53_RS23710;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 14740 14838 . + . ID=gene-CCO53_RS16930;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=CCO53_RS16930;old_locus_tag=CCO53_16900 NZ_NPLZ01000010.1 Protein Homology CDS 14740 14838 . + 0 ID=cds-WP_001541152.1;Parent=gene-CCO53_RS16930;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=CCO53_RS16930;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 14945 16633 . + . ID=gene-CCO53_RS16935;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CCO53_RS16935;old_locus_tag=CCO53_16905 NZ_NPLZ01000010.1 Protein Homology CDS 14945 16633 . + 0 ID=cds-WP_023217889.1;Parent=gene-CCO53_RS16935;Dbxref=GenBank:WP_023217889.1;Name=WP_023217889.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=CCO53_RS16935;product=acetolactate synthase large subunit;protein_id=WP_023217889.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 16637 16927 . + . ID=gene-CCO53_RS16940;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO53_RS16940;old_locus_tag=CCO53_16910 NZ_NPLZ01000010.1 Protein Homology CDS 16637 16927 . + 0 ID=cds-WP_001171826.1;Parent=gene-CCO53_RS16940;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=CCO53_RS16940;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 16929 17714 . - . ID=gene-CCO53_RS16945;Name=CCO53_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16945;old_locus_tag=CCO53_16915 NZ_NPLZ01000010.1 Protein Homology CDS 16929 17714 . - 0 ID=cds-WP_000448641.1;Parent=gene-CCO53_RS16945;Dbxref=GenBank:WP_000448641.1;Name=WP_000448641.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=CCO53_RS16945;product=DeoR family transcriptional regulator;protein_id=WP_000448641.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 18039 18959 . + . ID=gene-CCO53_RS16950;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO53_RS16950;old_locus_tag=CCO53_16920 NZ_NPLZ01000010.1 Protein Homology CDS 18039 18959 . + 0 ID=cds-WP_000350272.1;Parent=gene-CCO53_RS16950;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=CCO53_RS16950;product=ribokinase;protein_id=WP_000350272.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 18990 20306 . + . ID=gene-CCO53_RS16955;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO53_RS16955;old_locus_tag=CCO53_16925 NZ_NPLZ01000010.1 Protein Homology CDS 18990 20306 . + 0 ID=cds-WP_000998359.1;Parent=gene-CCO53_RS16955;Dbxref=GenBank:WP_000998359.1;Name=WP_000998359.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=CCO53_RS16955;product=L-fucose:H+ symporter permease;protein_id=WP_000998359.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 20318 21331 . + . ID=gene-CCO53_RS16960;Name=CCO53_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16960;old_locus_tag=CCO53_16930 NZ_NPLZ01000010.1 Protein Homology CDS 20318 21331 . + 0 ID=cds-WP_023201714.1;Parent=gene-CCO53_RS16960;Dbxref=GenBank:WP_023201714.1;Name=WP_023201714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=CCO53_RS16960;product=aldose 1-epimerase family protein;protein_id=WP_023201714.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 21485 22075 . + . ID=gene-CCO53_RS16965;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=CCO53_RS16965;old_locus_tag=CCO53_16935 NZ_NPLZ01000010.1 Protein Homology CDS 21485 22075 . + 0 ID=cds-WP_000633672.1;Parent=gene-CCO53_RS16965;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=CCO53_RS16965;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 22075 23577 . + . ID=gene-CCO53_RS16970;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=CCO53_RS16970;old_locus_tag=CCO53_16940 NZ_NPLZ01000010.1 Protein Homology CDS 22075 23577 . + 0 ID=cds-WP_001091262.1;Parent=gene-CCO53_RS16970;Dbxref=GenBank:WP_001091262.1;Name=WP_001091262.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=CCO53_RS16970;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001091262.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 23587 24915 . + . ID=gene-CCO53_RS16975;Name=CCO53_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16975;old_locus_tag=CCO53_16945 NZ_NPLZ01000010.1 Protein Homology CDS 23587 24915 . + 0 ID=cds-WP_000948174.1;Parent=gene-CCO53_RS16975;Dbxref=GenBank:WP_000948174.1;Name=WP_000948174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=CCO53_RS16975;product=MFS transporter;protein_id=WP_000948174.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 25058 26449 . + . ID=gene-CCO53_RS16980;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CCO53_RS16980;old_locus_tag=CCO53_16950 NZ_NPLZ01000010.1 Protein Homology CDS 25058 26449 . + 0 ID=cds-WP_000879181.1;Parent=gene-CCO53_RS16980;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=CCO53_RS16980;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 26642 27094 . + . ID=gene-CCO53_RS16985;Name=CCO53_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16985;old_locus_tag=CCO53_16955 NZ_NPLZ01000010.1 Protein Homology CDS 26642 27094 . + 0 ID=cds-WP_001519640.1;Parent=gene-CCO53_RS16985;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=CCO53_RS16985;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 27447 28190 . + . ID=gene-CCO53_RS16990;Name=CCO53_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16990;old_locus_tag=CCO53_16960 NZ_NPLZ01000010.1 Protein Homology CDS 27447 28190 . + 0 ID=cds-WP_000854956.1;Parent=gene-CCO53_RS16990;Dbxref=GenBank:WP_000854956.1;Name=WP_000854956.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=CCO53_RS16990;product=GntR family transcriptional regulator;protein_id=WP_000854956.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 28208 28681 . + . ID=gene-CCO53_RS16995;Name=CCO53_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16995;old_locus_tag=CCO53_16965 NZ_NPLZ01000010.1 Protein Homology CDS 28208 28681 . + 0 ID=cds-WP_001152237.1;Parent=gene-CCO53_RS16995;Dbxref=GenBank:WP_001152237.1;Name=WP_001152237.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=CCO53_RS16995;product=PTS sugar transporter subunit IIA;protein_id=WP_001152237.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 28678 28965 . + . ID=gene-CCO53_RS17000;Name=CCO53_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17000;old_locus_tag=CCO53_16970 NZ_NPLZ01000010.1 Protein Homology CDS 28678 28965 . + 0 ID=cds-WP_023206750.1;Parent=gene-CCO53_RS17000;Dbxref=GenBank:WP_023206750.1;Name=WP_023206750.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=CCO53_RS17000;product=PTS sugar transporter subunit IIB;protein_id=WP_023206750.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 29041 30399 . + . ID=gene-CCO53_RS17005;Name=CCO53_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17005;old_locus_tag=CCO53_16975 NZ_NPLZ01000010.1 Protein Homology CDS 29041 30399 . + 0 ID=cds-WP_000997827.1;Parent=gene-CCO53_RS17005;Dbxref=GenBank:WP_000997827.1;Name=WP_000997827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=CCO53_RS17005;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997827.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 30392 31876 . + . ID=gene-CCO53_RS17010;Name=CCO53_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17010;old_locus_tag=CCO53_16980 NZ_NPLZ01000010.1 Protein Homology CDS 30392 31876 . + 0 ID=cds-WP_094887760.1;Parent=gene-CCO53_RS17010;Dbxref=GenBank:WP_094887760.1;Name=WP_094887760.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=CCO53_RS17010;product=FGGY-family carbohydrate kinase;protein_id=WP_094887760.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 31939 32799 . + . ID=gene-CCO53_RS17015;Name=CCO53_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17015;old_locus_tag=CCO53_16985 NZ_NPLZ01000010.1 Protein Homology CDS 31939 32799 . + 0 ID=cds-WP_001131797.1;Parent=gene-CCO53_RS17015;Dbxref=GenBank:WP_001131797.1;Name=WP_001131797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=CCO53_RS17015;product=class II aldolase;protein_id=WP_001131797.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 32809 33078 . + . ID=gene-CCO53_RS17020;Name=CCO53_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17020;old_locus_tag=CCO53_16990 NZ_NPLZ01000010.1 Protein Homology CDS 32809 33078 . + 0 ID=cds-WP_000621026.1;Parent=gene-CCO53_RS17020;Dbxref=GenBank:WP_000621026.1;Name=WP_000621026.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=CCO53_RS17020;product=HPr family phosphocarrier protein;protein_id=WP_000621026.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 33169 33492 . - . ID=gene-CCO53_RS17025;Name=CCO53_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17025;old_locus_tag=CCO53_16995 NZ_NPLZ01000010.1 Protein Homology CDS 33169 33492 . - 0 ID=cds-WP_021000920.1;Parent=gene-CCO53_RS17025;Dbxref=GenBank:WP_021000920.1;Name=WP_021000920.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=CCO53_RS17025;product=helix-turn-helix domain-containing protein;protein_id=WP_021000920.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 33476 33835 . - . ID=gene-CCO53_RS17030;Name=CCO53_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17030;old_locus_tag=CCO53_17000 NZ_NPLZ01000010.1 Protein Homology CDS 33476 33835 . - 0 ID=cds-WP_001217955.1;Parent=gene-CCO53_RS17030;Dbxref=GenBank:WP_001217955.1;Name=WP_001217955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=CCO53_RS17030;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217955.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 34051 35244 . + . ID=gene-CCO53_RS17035;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=CCO53_RS17035;old_locus_tag=CCO53_17005 NZ_NPLZ01000010.1 Protein Homology CDS 34051 35244 . + 0 ID=cds-WP_001004806.1;Parent=gene-CCO53_RS17035;Dbxref=GenBank:WP_001004806.1;Name=WP_001004806.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=CCO53_RS17035;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004806.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 35304 36686 . - . ID=gene-CCO53_RS17040;Name=CCO53_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17040;old_locus_tag=CCO53_17010 NZ_NPLZ01000010.1 Protein Homology CDS 35304 36686 . - 0 ID=cds-WP_001270471.1;Parent=gene-CCO53_RS17040;Dbxref=GenBank:WP_001270471.1;Name=WP_001270471.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=CCO53_RS17040;product=glycoside hydrolase family 1 protein;protein_id=WP_001270471.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 36792 37085 . - . ID=gene-CCO53_RS17045;Name=CCO53_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17045;old_locus_tag=CCO53_17015 NZ_NPLZ01000010.1 Protein Homology CDS 36792 37085 . - 0 ID=cds-WP_000824212.1;Parent=gene-CCO53_RS17045;Dbxref=GenBank:WP_000824212.1;Name=WP_000824212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=CCO53_RS17045;product=YicS family protein;protein_id=WP_000824212.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 37282 40080 . + . ID=gene-CCO53_RS17050;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=CCO53_RS17050;old_locus_tag=CCO53_17020 NZ_NPLZ01000010.1 Protein Homology CDS 37282 40080 . + 0 ID=cds-WP_094887761.1;Parent=gene-CCO53_RS17050;Dbxref=GenBank:WP_094887761.1;Name=WP_094887761.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=CCO53_RS17050;product=transcriptional regulator DagR;protein_id=WP_094887761.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 40299 40724 . + . ID=gene-CCO53_RS17055;Name=CCO53_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17055;old_locus_tag=CCO53_17025 NZ_NPLZ01000010.1 Protein Homology CDS 40299 40724 . + 0 ID=cds-WP_000214106.1;Parent=gene-CCO53_RS17055;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=CCO53_RS17055;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 40735 41220 . + . ID=gene-CCO53_RS17060;Name=CCO53_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17060;old_locus_tag=CCO53_17030 NZ_NPLZ01000010.1 Protein Homology CDS 40735 41220 . + 0 ID=cds-WP_001284295.1;Parent=gene-CCO53_RS17060;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=CCO53_RS17060;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 41366 42115 . + . ID=gene-CCO53_RS17065;Name=CCO53_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17065;old_locus_tag=CCO53_17035 NZ_NPLZ01000010.1 Protein Homology CDS 41366 42115 . + 0 ID=cds-WP_000380259.1;Parent=gene-CCO53_RS17065;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=CCO53_RS17065;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 42112 42972 . + . ID=gene-CCO53_RS17070;Name=CCO53_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17070;old_locus_tag=CCO53_17040 NZ_NPLZ01000010.1 Protein Homology CDS 42112 42972 . + 0 ID=cds-WP_001526325.1;Parent=gene-CCO53_RS17070;Dbxref=GenBank:WP_001526325.1;Name=WP_001526325.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=CCO53_RS17070;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001526325.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 42976 44085 . + . ID=gene-CCO53_RS17075;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=CCO53_RS17075;old_locus_tag=CCO53_17045 NZ_NPLZ01000010.1 Protein Homology CDS 42976 44085 . + 0 ID=cds-WP_076935907.1;Parent=gene-CCO53_RS17075;Dbxref=GenBank:WP_076935907.1;Name=WP_076935907.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=CCO53_RS17075;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_076935907.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 44072 44815 . + . ID=gene-CCO53_RS17080;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO53_RS17080;old_locus_tag=CCO53_17050 NZ_NPLZ01000010.1 Protein Homology CDS 44072 44815 . + 0 ID=cds-WP_001186146.1;Parent=gene-CCO53_RS17080;Dbxref=GenBank:WP_001186146.1;Name=WP_001186146.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=CCO53_RS17080;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186146.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 45051 45992 . + . ID=gene-CCO53_RS17085;Name=CCO53_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17085;old_locus_tag=CCO53_17055 NZ_NPLZ01000010.1 Protein Homology CDS 45051 45992 . + 0 ID=cds-WP_080108886.1;Parent=gene-CCO53_RS17085;Dbxref=GenBank:WP_080108886.1;Name=WP_080108886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=CCO53_RS17085;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_080108886.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 46035 46937 . - . ID=gene-CCO53_RS17090;Name=CCO53_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17090;old_locus_tag=CCO53_17060 NZ_NPLZ01000010.1 Protein Homology CDS 46035 46937 . - 0 ID=cds-WP_000535970.1;Parent=gene-CCO53_RS17090;Dbxref=GenBank:WP_000535970.1;Name=WP_000535970.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=CCO53_RS17090;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 47444 48139 . + . ID=gene-CCO53_RS17095;Name=CCO53_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17095;old_locus_tag=CCO53_17065 NZ_NPLZ01000010.1 Protein Homology CDS 47444 48139 . + 0 ID=cds-WP_000392699.1;Parent=gene-CCO53_RS17095;Dbxref=GenBank:WP_000392699.1;Name=WP_000392699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=CCO53_RS17095;product=MgtC family protein;protein_id=WP_000392699.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 48359 51085 . + . ID=gene-CCO53_RS17100;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO53_RS17100;old_locus_tag=CCO53_17070 NZ_NPLZ01000010.1 Protein Homology CDS 48359 51085 . + 0 ID=cds-WP_094887762.1;Parent=gene-CCO53_RS17100;Dbxref=GenBank:WP_094887762.1;Name=WP_094887762.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=CCO53_RS17100;product=magnesium-translocating P-type ATPase;protein_id=WP_094887762.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 51107 51199 . + . ID=gene-CCO53_RS17105;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=CCO53_RS17105;old_locus_tag=CCO53_17075 NZ_NPLZ01000010.1 Protein Homology CDS 51107 51199 . + 0 ID=cds-WP_001082117.1;Parent=gene-CCO53_RS17105;Dbxref=GenBank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=CCO53_RS17105;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 51212 51298 . + . ID=gene-CCO53_RS24200;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=CCO53_RS24200 NZ_NPLZ01000010.1 Protein Homology CDS 51212 51298 . + 0 ID=cds-WP_252515021.1;Parent=gene-CCO53_RS24200;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=CCO53_RS24200;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 51400 51879 . + . ID=gene-CCO53_RS17110;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=CCO53_RS17110;old_locus_tag=CCO53_17080 NZ_NPLZ01000010.1 Protein Homology CDS 51400 51879 . + 0 ID=cds-WP_001065324.1;Parent=gene-CCO53_RS17110;Dbxref=GenBank:WP_001065324.1;Name=WP_001065324.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=CCO53_RS17110;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065324.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 52108 52788 . - . ID=gene-CCO53_RS17115;Name=CCO53_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17115;old_locus_tag=CCO53_17085 NZ_NPLZ01000010.1 Protein Homology CDS 52108 52788 . - 0 ID=cds-WP_000106461.1;Parent=gene-CCO53_RS17115;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=CCO53_RS17115;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 53572 54429 . + . ID=gene-CCO53_RS17125;Name=CCO53_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17125;old_locus_tag=CCO53_17095 NZ_NPLZ01000010.1 Protein Homology CDS 53572 54429 . + 0 ID=cds-WP_001278064.1;Parent=gene-CCO53_RS17125;Dbxref=GenBank:WP_001278064.1;Name=WP_001278064.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=CCO53_RS17125;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001278064.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 54440 54904 . + . ID=gene-CCO53_RS17130;Name=CCO53_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17130;old_locus_tag=CCO53_17100 NZ_NPLZ01000010.1 Protein Homology CDS 54440 54904 . + 0 ID=cds-WP_015633176.1;Parent=gene-CCO53_RS17130;Dbxref=GenBank:WP_015633176.1;Name=WP_015633176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=CCO53_RS17130;product=hypothetical protein;protein_id=WP_015633176.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 54999 57851 . - . ID=gene-CCO53_RS17135;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=CCO53_RS17135;old_locus_tag=CCO53_17105 NZ_NPLZ01000010.1 Protein Homology CDS 54999 57851 . - 0 ID=cds-WP_094887763.1;Parent=gene-CCO53_RS17135;Dbxref=GenBank:WP_094887763.1;Name=WP_094887763.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=CCO53_RS17135;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_094887763.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 57926 58543 . - . ID=gene-CCO53_RS17140;Name=CCO53_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17140;old_locus_tag=CCO53_17110 NZ_NPLZ01000010.1 Protein Homology CDS 57926 58543 . - 0 ID=cds-WP_000984812.1;Parent=gene-CCO53_RS17140;Dbxref=GenBank:WP_000984812.1;Name=WP_000984812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=CCO53_RS17140;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984812.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq pseudogene 59299 59409 . - . ID=gene-CCO53_RS24080;Name=CCO53_RS24080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24080;partial=true;pseudo=true;start_range=.,59299 NZ_NPLZ01000010.1 Protein Homology CDS 59299 59409 . - 0 ID=cds-CCO53_RS24080;Parent=gene-CCO53_RS24080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=CCO53_RS24080;partial=true;product=transposase;pseudo=true;start_range=.,59299;transl_table=11 NZ_NPLZ01000010.1 RefSeq pseudogene 59819 60158 . + . ID=gene-CCO53_RS24420;Name=CCO53_RS24420;end_range=60158,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24420;partial=true;pseudo=true NZ_NPLZ01000010.1 Protein Homology CDS 59819 60158 . + 0 ID=cds-CCO53_RS24420;Parent=gene-CCO53_RS24420;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=60158,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611920.1;locus_tag=CCO53_RS24420;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 60384 61334 . - . ID=gene-CCO53_RS17155;Name=CCO53_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17155;old_locus_tag=CCO53_17125 NZ_NPLZ01000010.1 Protein Homology CDS 60384 61334 . - 0 ID=cds-WP_080250800.1;Parent=gene-CCO53_RS17155;Dbxref=GenBank:WP_080250800.1;Name=WP_080250800.1;Ontology_term=GO:0001171,GO:0051607;gbkey=CDS;go_process=reverse transcription|0001171||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830124.1;locus_tag=CCO53_RS17155;product=retron St85 family RNA-directed DNA polymerase;protein_id=WP_080250800.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 61321 62274 . - . ID=gene-CCO53_RS17160;Name=CCO53_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17160;old_locus_tag=CCO53_17130 NZ_NPLZ01000010.1 Protein Homology CDS 61321 62274 . - 0 ID=cds-WP_023210794.1;Parent=gene-CCO53_RS17160;Dbxref=GenBank:WP_023210794.1;Name=WP_023210794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830125.1;locus_tag=CCO53_RS17160;product=retron St85 family effector protein;protein_id=WP_023210794.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq pseudogene 62644 62823 . - . ID=gene-CCO53_RS17165;Name=CCO53_RS17165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS17165;old_locus_tag=CCO53_17135;partial=true;pseudo=true;start_range=.,62644 NZ_NPLZ01000010.1 Protein Homology CDS 62644 62823 . - 0 ID=cds-CCO53_RS17165;Parent=gene-CCO53_RS17165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218976.1;locus_tag=CCO53_RS17165;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,62644;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 62985 63079 . - . ID=gene-CCO53_RS17170;Name=CCO53_RS17170;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS17170;old_locus_tag=CCO53_17140 NZ_NPLZ01000010.1 tRNAscan-SE tRNA 62985 63079 . - . ID=rna-CCO53_RS17170;Parent=gene-CCO53_RS17170;anticodon=(pos:complement(63043..63045));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS17170;product=tRNA-Sec NZ_NPLZ01000010.1 tRNAscan-SE exon 62985 63079 . - . ID=exon-CCO53_RS17170-1;Parent=rna-CCO53_RS17170;anticodon=(pos:complement(63043..63045));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS17170;product=tRNA-Sec NZ_NPLZ01000010.1 RefSeq pseudogene 63367 64753 . + . ID=gene-CCO53_RS17175;Name=CCO53_RS17175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS17175;old_locus_tag=CCO53_17145;pseudo=true NZ_NPLZ01000010.1 Protein Homology CDS 63367 64753 . + 0 ID=cds-CCO53_RS17175;Parent=gene-CCO53_RS17175;Note=frameshifted;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=CCO53_RS17175;product=glycoside-pentoside-hexuronide family transporter;pseudo=true;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 64765 67083 . + . ID=gene-CCO53_RS17180;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=CCO53_RS17180;old_locus_tag=CCO53_17150 NZ_NPLZ01000010.1 Protein Homology CDS 64765 67083 . + 0 ID=cds-WP_094887764.1;Parent=gene-CCO53_RS17180;Dbxref=GenBank:WP_094887764.1;Name=WP_094887764.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=CCO53_RS17180;product=alpha-xylosidase;protein_id=WP_094887764.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 67186 68895 . - . ID=gene-CCO53_RS17185;Name=CCO53_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17185;old_locus_tag=CCO53_17155 NZ_NPLZ01000010.1 Protein Homology CDS 67186 68895 . - 0 ID=cds-WP_000766665.1;Parent=gene-CCO53_RS17185;Dbxref=GenBank:WP_000766665.1;Name=WP_000766665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=CCO53_RS17185;product=AsmA family protein;protein_id=WP_000766665.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 69016 70407 . - . ID=gene-CCO53_RS17190;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=CCO53_RS17190;old_locus_tag=CCO53_17160 NZ_NPLZ01000010.1 Protein Homology CDS 69016 70407 . - 0 ID=cds-WP_000115428.1;Parent=gene-CCO53_RS17190;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=CCO53_RS17190;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 70635 71840 . + . ID=gene-CCO53_RS17195;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CCO53_RS17195;old_locus_tag=CCO53_17165 NZ_NPLZ01000010.1 Protein Homology CDS 70635 71840 . + 0 ID=cds-WP_000462251.1;Parent=gene-CCO53_RS17195;Dbxref=GenBank:WP_000462251.1;Name=WP_000462251.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462646.1;locus_tag=CCO53_RS17195;product=sodium/glutamate symporter;protein_id=WP_000462251.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 71843 72694 . + . ID=gene-CCO53_RS17200;Name=CCO53_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17200;old_locus_tag=CCO53_17170 NZ_NPLZ01000010.1 Protein Homology CDS 71843 72694 . + 0 ID=cds-WP_000745469.1;Parent=gene-CCO53_RS17200;Dbxref=GenBank:WP_000745469.1;Name=WP_000745469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462645.1;locus_tag=CCO53_RS17200;product=hypothetical protein;protein_id=WP_000745469.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 72697 74778 . - . ID=gene-CCO53_RS17205;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CCO53_RS17205;old_locus_tag=CCO53_17175 NZ_NPLZ01000010.1 Protein Homology CDS 72697 74778 . - 0 ID=cds-WP_094882280.1;Parent=gene-CCO53_RS17205;Dbxref=GenBank:WP_094882280.1;Name=WP_094882280.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=CCO53_RS17205;product=ATP-dependent DNA helicase RecG;protein_id=WP_094882280.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 74784 75473 . - . ID=gene-CCO53_RS17210;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=CCO53_RS17210;old_locus_tag=CCO53_17180 NZ_NPLZ01000010.1 Protein Homology CDS 74784 75473 . - 0 ID=cds-WP_001068436.1;Parent=gene-CCO53_RS17210;Dbxref=GenBank:WP_001068436.1;Name=WP_001068436.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=CCO53_RS17210;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068436.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 75478 77589 . - . ID=gene-CCO53_RS17215;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=CCO53_RS17215;old_locus_tag=CCO53_17185 NZ_NPLZ01000010.1 Protein Homology CDS 75478 77589 . - 0 ID=cds-WP_000280481.1;Parent=gene-CCO53_RS17215;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=CCO53_RS17215;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 77608 77883 . - . ID=gene-CCO53_RS17220;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CCO53_RS17220;old_locus_tag=CCO53_17190 NZ_NPLZ01000010.1 Protein Homology CDS 77608 77883 . - 0 ID=cds-WP_000135058.1;Parent=gene-CCO53_RS17220;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=CCO53_RS17220;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 77938 78561 . - . ID=gene-CCO53_RS17225;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CCO53_RS17225;old_locus_tag=CCO53_17195 NZ_NPLZ01000010.1 Protein Homology CDS 77938 78561 . - 0 ID=cds-WP_000046966.1;Parent=gene-CCO53_RS17225;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=CCO53_RS17225;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 78818 80503 . + . ID=gene-CCO53_RS17230;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=CCO53_RS17230;old_locus_tag=CCO53_17200 NZ_NPLZ01000010.1 Protein Homology CDS 78818 80503 . + 0 ID=cds-WP_058331588.1;Parent=gene-CCO53_RS17230;Dbxref=GenBank:WP_058331588.1;Name=WP_058331588.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=CCO53_RS17230;product=NAD-dependent DNA ligase LigB;protein_id=WP_058331588.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 80500 81117 . - . ID=gene-CCO53_RS17235;Name=CCO53_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17235;old_locus_tag=CCO53_17205 NZ_NPLZ01000010.1 Protein Homology CDS 80500 81117 . - 0 ID=cds-WP_000924334.1;Parent=gene-CCO53_RS17235;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=CCO53_RS17235;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 81368 82249 . - . ID=gene-CCO53_RS17240;Name=CCO53_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17240;old_locus_tag=CCO53_17210 NZ_NPLZ01000010.1 Protein Homology CDS 81368 82249 . - 0 ID=cds-WP_001593937.1;Parent=gene-CCO53_RS17240;Dbxref=GenBank:WP_001593937.1;Name=WP_001593937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=CCO53_RS17240;product=HARLDQ motif MBL-fold protein;protein_id=WP_001593937.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 82323 83225 . + . ID=gene-CCO53_RS17245;Name=CCO53_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17245;old_locus_tag=CCO53_17215 NZ_NPLZ01000010.1 Protein Homology CDS 82323 83225 . + 0 ID=cds-WP_001050866.1;Parent=gene-CCO53_RS17245;Dbxref=GenBank:WP_001050866.1;Name=WP_001050866.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=CCO53_RS17245;product=LysR family transcriptional regulator;protein_id=WP_001050866.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 83275 84138 . - . ID=gene-CCO53_RS17250;Name=CCO53_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17250;old_locus_tag=CCO53_17220 NZ_NPLZ01000010.1 Protein Homology CDS 83275 84138 . - 0 ID=cds-WP_000621353.1;Parent=gene-CCO53_RS17250;Dbxref=GenBank:WP_000621353.1;Name=WP_000621353.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=CCO53_RS17250;product=YicC/YloC family endoribonuclease;protein_id=WP_000621353.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 84264 84980 . + . ID=gene-CCO53_RS17260;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=CCO53_RS17260;old_locus_tag=CCO53_17230 NZ_NPLZ01000010.1 Protein Homology CDS 84264 84980 . + 0 ID=cds-WP_001247078.1;Parent=gene-CCO53_RS17260;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=CCO53_RS17260;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 85059 85700 . + . ID=gene-CCO53_RS17265;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CCO53_RS17265;old_locus_tag=CCO53_17235 NZ_NPLZ01000010.1 Protein Homology CDS 85059 85700 . + 0 ID=cds-WP_000806167.1;Parent=gene-CCO53_RS17265;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=CCO53_RS17265;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 85778 86374 . - . ID=gene-CCO53_RS17270;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=CCO53_RS17270;old_locus_tag=CCO53_17240 NZ_NPLZ01000010.1 Protein Homology CDS 85778 86374 . - 0 ID=cds-WP_000818607.1;Parent=gene-CCO53_RS17270;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=CCO53_RS17270;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 86482 86940 . - . ID=gene-CCO53_RS17275;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=CCO53_RS17275;old_locus_tag=CCO53_17245 NZ_NPLZ01000010.1 Protein Homology CDS 86482 86940 . - 0 ID=cds-WP_000976078.1;Parent=gene-CCO53_RS17275;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=CCO53_RS17275;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 86918 88138 . - . ID=gene-CCO53_RS17280;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CCO53_RS17280;old_locus_tag=CCO53_17250 NZ_NPLZ01000010.1 Protein Homology CDS 86918 88138 . - 0 ID=cds-WP_000050176.1;Parent=gene-CCO53_RS17280;Dbxref=GenBank:WP_000050176.1;Name=WP_000050176.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=CCO53_RS17280;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050176.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 88314 88979 . + . ID=gene-CCO53_RS17285;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CCO53_RS17285;old_locus_tag=CCO53_17255 NZ_NPLZ01000010.1 Protein Homology CDS 88314 88979 . + 0 ID=cds-WP_000380129.1;Parent=gene-CCO53_RS17285;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=CCO53_RS17285;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 89197 89433 . + . ID=gene-CCO53_RS17290;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CCO53_RS17290;old_locus_tag=CCO53_17260 NZ_NPLZ01000010.1 Protein Homology CDS 89197 89433 . + 0 ID=cds-WP_001519051.1;Parent=gene-CCO53_RS17290;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=CCO53_RS17290;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 89454 89621 . + . ID=gene-CCO53_RS17295;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CCO53_RS17295;old_locus_tag=CCO53_17265 NZ_NPLZ01000010.1 Protein Homology CDS 89454 89621 . + 0 ID=cds-WP_001051798.1;Parent=gene-CCO53_RS17295;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=CCO53_RS17295;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 89719 90528 . + . ID=gene-CCO53_RS17300;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CCO53_RS17300;old_locus_tag=CCO53_17270 NZ_NPLZ01000010.1 Protein Homology CDS 89719 90528 . + 0 ID=cds-WP_094887765.1;Parent=gene-CCO53_RS17300;Dbxref=GenBank:WP_094887765.1;Name=WP_094887765.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=CCO53_RS17300;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_094887765.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 90556 91035 . - . ID=gene-CCO53_RS17305;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CCO53_RS17305;old_locus_tag=CCO53_17275 NZ_NPLZ01000010.1 Protein Homology CDS 90556 91035 . - 0 ID=cds-WP_001171884.1;Parent=gene-CCO53_RS17305;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=CCO53_RS17305;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 91044 92321 . - . ID=gene-CCO53_RS17310;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=CCO53_RS17310;old_locus_tag=CCO53_17280 NZ_NPLZ01000010.1 Protein Homology CDS 91044 92321 . - 0 ID=cds-WP_000891582.1;Parent=gene-CCO53_RS17310;Dbxref=GenBank:WP_000891582.1;Name=WP_000891582.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=CCO53_RS17310;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891582.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 92730 93800 . + . ID=gene-CCO53_RS17315;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=CCO53_RS17315;old_locus_tag=CCO53_17285 NZ_NPLZ01000010.1 Protein Homology CDS 92730 93800 . + 0 ID=cds-WP_001522125.1;Parent=gene-CCO53_RS17315;Dbxref=GenBank:WP_001522125.1;Name=WP_001522125.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=CCO53_RS17315;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001522125.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 93797 94921 . + . ID=gene-CCO53_RS17320;Name=CCO53_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17320;old_locus_tag=CCO53_17290 NZ_NPLZ01000010.1 Protein Homology CDS 93797 94921 . + 0 ID=cds-WP_001261577.1;Parent=gene-CCO53_RS17320;Dbxref=GenBank:WP_001261577.1;Name=WP_001261577.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=CCO53_RS17320;product=glycosyltransferase family 4 protein;protein_id=WP_001261577.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 94914 95711 . + . ID=gene-CCO53_RS17325;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=CCO53_RS17325;old_locus_tag=CCO53_17295 NZ_NPLZ01000010.1 Protein Homology CDS 94914 95711 . + 0 ID=cds-WP_000229825.1;Parent=gene-CCO53_RS17325;Dbxref=GenBank:WP_000229825.1;Name=WP_000229825.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=CCO53_RS17325;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229825.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 95817 96689 . + . ID=gene-CCO53_RS17330;Name=CCO53_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17330;old_locus_tag=CCO53_17300 NZ_NPLZ01000010.1 Protein Homology CDS 95817 96689 . + 0 ID=cds-WP_227490999.1;Parent=gene-CCO53_RS17330;Dbxref=GenBank:WP_227490999.1;Name=WP_227490999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280506.1;locus_tag=CCO53_RS17330;product=glycosyltransferase family 52;protein_id=WP_227490999.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 96775 97854 . + . ID=gene-CCO53_RS17335;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=CCO53_RS17335;old_locus_tag=CCO53_17305 NZ_NPLZ01000010.1 Protein Homology CDS 96775 97854 . + 0 ID=cds-WP_023201726.1;Parent=gene-CCO53_RS17335;Dbxref=GenBank:WP_023201726.1;Name=WP_023201726.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=CCO53_RS17335;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_023201726.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 97860 98873 . + . ID=gene-CCO53_RS17340;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=CCO53_RS17340;old_locus_tag=CCO53_17310 NZ_NPLZ01000010.1 Protein Homology CDS 97860 98873 . + 0 ID=cds-WP_000088489.1;Parent=gene-CCO53_RS17340;Dbxref=GenBank:WP_000088489.1;Name=WP_000088489.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=CCO53_RS17340;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088489.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 98891 99901 . + . ID=gene-CCO53_RS17345;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=CCO53_RS17345;old_locus_tag=CCO53_17315 NZ_NPLZ01000010.1 Protein Homology CDS 98891 99901 . + 0 ID=cds-WP_000376860.1;Parent=gene-CCO53_RS17345;Dbxref=GenBank:WP_000376860.1;Name=WP_000376860.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=CCO53_RS17345;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_000376860.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 99924 100622 . + . ID=gene-CCO53_RS17350;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=CCO53_RS17350;old_locus_tag=CCO53_17320 NZ_NPLZ01000010.1 Protein Homology CDS 99924 100622 . + 0 ID=cds-WP_000582812.1;Parent=gene-CCO53_RS17350;Dbxref=GenBank:WP_000582812.1;Name=WP_000582812.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=CCO53_RS17350;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582812.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 100772 101581 . + . ID=gene-CCO53_RS17355;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=CCO53_RS17355;old_locus_tag=CCO53_17325 NZ_NPLZ01000010.1 Protein Homology CDS 100772 101581 . + 0 ID=cds-WP_000536020.1;Parent=gene-CCO53_RS17355;Dbxref=GenBank:WP_000536020.1;Name=WP_000536020.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=CCO53_RS17355;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536020.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 101681 102826 . + . ID=gene-CCO53_RS17360;Name=CCO53_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17360;old_locus_tag=CCO53_17330 NZ_NPLZ01000010.1 Protein Homology CDS 101681 102826 . + 0 ID=cds-WP_000591835.1;Parent=gene-CCO53_RS17360;Dbxref=GenBank:WP_000591835.1;Name=WP_000591835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=CCO53_RS17360;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591835.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 102883 104097 . - . ID=gene-CCO53_RS17365;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=CCO53_RS17365;old_locus_tag=CCO53_17335 NZ_NPLZ01000010.1 Protein Homology CDS 102883 104097 . - 0 ID=cds-WP_000958440.1;Parent=gene-CCO53_RS17365;Dbxref=GenBank:WP_000958440.1;Name=WP_000958440.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=CCO53_RS17365;product=O-antigen ligase RfaL;protein_id=WP_000958440.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 104137 105090 . - . ID=gene-CCO53_RS17370;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=CCO53_RS17370;old_locus_tag=CCO53_17340 NZ_NPLZ01000010.1 Protein Homology CDS 104137 105090 . - 0 ID=cds-WP_001264614.1;Parent=gene-CCO53_RS17370;Dbxref=GenBank:WP_001264614.1;Name=WP_001264614.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=CCO53_RS17370;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264614.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 105090 106136 . - . ID=gene-CCO53_RS17375;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=CCO53_RS17375;old_locus_tag=CCO53_17345 NZ_NPLZ01000010.1 Protein Homology CDS 105090 106136 . - 0 ID=cds-WP_000699202.1;Parent=gene-CCO53_RS17375;Dbxref=GenBank:WP_000699202.1;Name=WP_000699202.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=CCO53_RS17375;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699202.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 106139 107071 . - . ID=gene-CCO53_RS17380;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=CCO53_RS17380;old_locus_tag=CCO53_17350 NZ_NPLZ01000010.1 Protein Homology CDS 106139 107071 . - 0 ID=cds-WP_000587774.1;Parent=gene-CCO53_RS17380;Dbxref=GenBank:WP_000587774.1;Name=WP_000587774.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=CCO53_RS17380;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587774.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 107274 108470 . + . ID=gene-CCO53_RS17385;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CCO53_RS17385;old_locus_tag=CCO53_17355 NZ_NPLZ01000010.1 Protein Homology CDS 107274 108470 . + 0 ID=cds-WP_024797497.1;Parent=gene-CCO53_RS17385;Dbxref=GenBank:WP_024797497.1;Name=WP_024797497.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=CCO53_RS17385;product=glycine C-acetyltransferase;protein_id=WP_024797497.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 108480 109505 . + . ID=gene-CCO53_RS17390;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=CCO53_RS17390;old_locus_tag=CCO53_17360 NZ_NPLZ01000010.1 Protein Homology CDS 108480 109505 . + 0 ID=cds-WP_000645990.1;Parent=gene-CCO53_RS17390;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=CCO53_RS17390;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 110000 111034 . + . ID=gene-CCO53_RS17400;Name=CCO53_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17400;old_locus_tag=CCO53_17370 NZ_NPLZ01000010.1 Protein Homology CDS 110000 111034 . + 0 ID=cds-WP_000798200.1;Parent=gene-CCO53_RS17400;Dbxref=GenBank:WP_000798200.1;Name=WP_000798200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=CCO53_RS17400;product=glycosyltransferase;protein_id=WP_000798200.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 111021 111983 . - . ID=gene-CCO53_RS17405;Name=CCO53_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17405;old_locus_tag=CCO53_17375 NZ_NPLZ01000010.1 Protein Homology CDS 111021 111983 . - 0 ID=cds-WP_001135513.1;Parent=gene-CCO53_RS17405;Dbxref=GenBank:WP_001135513.1;Name=WP_001135513.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=CCO53_RS17405;product=divergent polysaccharide deacetylase family protein;protein_id=WP_001135513.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 111987 113246 . - . ID=gene-CCO53_RS17410;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=CCO53_RS17410;old_locus_tag=CCO53_17380 NZ_NPLZ01000010.1 Protein Homology CDS 111987 113246 . - 0 ID=cds-WP_058814511.1;Parent=gene-CCO53_RS17410;Dbxref=GenBank:WP_058814511.1;Name=WP_058814511.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=CCO53_RS17410;product=murein hydrolase activator EnvC;protein_id=WP_058814511.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 113280 114824 . - . ID=gene-CCO53_RS17415;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=CCO53_RS17415;old_locus_tag=CCO53_17385 NZ_NPLZ01000010.1 Protein Homology CDS 113280 114824 . - 0 ID=cds-WP_000116576.1;Parent=gene-CCO53_RS17415;Dbxref=GenBank:WP_000116576.1;Name=WP_000116576.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=CCO53_RS17415;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116576.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 115072 115503 . + . ID=gene-CCO53_RS17420;Name=CCO53_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17420;old_locus_tag=CCO53_17390 NZ_NPLZ01000010.1 Protein Homology CDS 115072 115503 . + 0 ID=cds-WP_001156179.1;Parent=gene-CCO53_RS17420;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=CCO53_RS17420;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 115589 115840 . + . ID=gene-CCO53_RS17425;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=CCO53_RS17425;old_locus_tag=CCO53_17395 NZ_NPLZ01000010.1 Protein Homology CDS 115589 115840 . + 0 ID=cds-WP_001273795.1;Parent=gene-CCO53_RS17425;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=CCO53_RS17425;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 115884 116351 . + . ID=gene-CCO53_RS17430;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=CCO53_RS17430;old_locus_tag=CCO53_17400 NZ_NPLZ01000010.1 Protein Homology CDS 115884 116351 . + 0 ID=cds-WP_000003370.1;Parent=gene-CCO53_RS17430;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=CCO53_RS17430;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 116351 117370 . + . ID=gene-CCO53_RS17435;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=CCO53_RS17435;old_locus_tag=CCO53_17405 NZ_NPLZ01000010.1 Protein Homology CDS 116351 117370 . + 0 ID=cds-WP_001076596.1;Parent=gene-CCO53_RS17435;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=CCO53_RS17435;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 117448 118269 . + . ID=gene-CCO53_RS17440;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CCO53_RS17440;old_locus_tag=CCO53_17410 NZ_NPLZ01000010.1 Protein Homology CDS 117448 118269 . + 0 ID=cds-WP_001112114.1;Parent=gene-CCO53_RS17440;Dbxref=GenBank:WP_001112114.1;Name=WP_001112114.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=CCO53_RS17440;product=serine O-acetyltransferase;protein_id=WP_001112114.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 118352 119662 . - . ID=gene-CCO53_RS17445;Name=CCO53_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17445;old_locus_tag=CCO53_17415 NZ_NPLZ01000010.1 Protein Homology CDS 118352 119662 . - 0 ID=cds-WP_058331584.1;Parent=gene-CCO53_RS17445;Dbxref=GenBank:WP_058331584.1;Name=WP_058331584.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=CCO53_RS17445;product=MFS transporter;protein_id=WP_058331584.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 119736 120932 . - . ID=gene-CCO53_RS17450;Name=CCO53_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17450;old_locus_tag=CCO53_17420 NZ_NPLZ01000010.1 Protein Homology CDS 119736 120932 . - 0 ID=cds-WP_001218249.1;Parent=gene-CCO53_RS17450;Dbxref=GenBank:WP_001218249.1;Name=WP_001218249.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=CCO53_RS17450;product=L-talarate/galactarate dehydratase;protein_id=WP_001218249.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 121251 122255 . + . ID=gene-CCO53_RS17460;Name=CCO53_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17460;old_locus_tag=CCO53_17430 NZ_NPLZ01000010.1 Protein Homology CDS 121251 122255 . + 0 ID=cds-WP_001537635.1;Parent=gene-CCO53_RS17460;Dbxref=GenBank:WP_001537635.1;Name=WP_001537635.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=CCO53_RS17460;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001537635.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 122323 122796 . - . ID=gene-CCO53_RS17465;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CCO53_RS17465;old_locus_tag=CCO53_17435 NZ_NPLZ01000010.1 Protein Homology CDS 122323 122796 . - 0 ID=cds-WP_000932335.1;Parent=gene-CCO53_RS17465;Dbxref=GenBank:WP_000932335.1;Name=WP_000932335.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=CCO53_RS17465;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932335.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 122861 124051 . - . ID=gene-CCO53_RS17470;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=CCO53_RS17470;old_locus_tag=CCO53_17440 NZ_NPLZ01000010.1 Protein Homology CDS 122861 124051 . - 0 ID=cds-WP_000586988.1;Parent=gene-CCO53_RS17470;Dbxref=GenBank:WP_000586988.1;Name=WP_000586988.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=CCO53_RS17470;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586988.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 124048 124824 . - . ID=gene-CCO53_RS17475;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=CCO53_RS17475;old_locus_tag=CCO53_17445 NZ_NPLZ01000010.1 Protein Homology CDS 124048 124824 . - 0 ID=cds-WP_000636696.1;Parent=gene-CCO53_RS17475;Dbxref=GenBank:WP_000636696.1;Name=WP_000636696.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=CCO53_RS17475;product=transcriptional regulator LldR;protein_id=WP_000636696.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 124821 126476 . - . ID=gene-CCO53_RS17480;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=CCO53_RS17480;old_locus_tag=CCO53_17450 NZ_NPLZ01000010.1 Protein Homology CDS 124821 126476 . - 0 ID=cds-WP_001055312.1;Parent=gene-CCO53_RS17480;Dbxref=GenBank:WP_001055312.1;Name=WP_001055312.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=CCO53_RS17480;product=L-lactate permease;protein_id=WP_001055312.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 126750 127112 . - . ID=gene-CCO53_RS17485;Name=CCO53_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17485;old_locus_tag=CCO53_17455 NZ_NPLZ01000010.1 Protein Homology CDS 126750 127112 . - 0 ID=cds-WP_000665688.1;Parent=gene-CCO53_RS17485;Dbxref=GenBank:WP_000665688.1;Name=WP_000665688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=CCO53_RS17485;product=YibL family ribosome-associated protein;protein_id=WP_000665688.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 127403 127612 . + . ID=gene-CCO53_RS17490;Name=CCO53_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17490;old_locus_tag=CCO53_17460 NZ_NPLZ01000010.1 Protein Homology CDS 127403 127612 . + 0 ID=cds-WP_001062558.1;Parent=gene-CCO53_RS17490;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=CCO53_RS17490;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 127622 128212 . - . ID=gene-CCO53_RS17495;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=CCO53_RS17495;old_locus_tag=CCO53_17465 NZ_NPLZ01000010.1 Protein Homology CDS 127622 128212 . - 0 ID=cds-WP_000193201.1;Parent=gene-CCO53_RS17495;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=CCO53_RS17495;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 128209 129357 . - . ID=gene-CCO53_RS17500;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=CCO53_RS17500;old_locus_tag=CCO53_17470 NZ_NPLZ01000010.1 Protein Homology CDS 128209 129357 . - 0 ID=cds-WP_094887766.1;Parent=gene-CCO53_RS17500;Dbxref=GenBank:WP_094887766.1;Name=WP_094887766.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=CCO53_RS17500;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_094887766.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 129588 131504 . - . ID=gene-CCO53_RS17505;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=CCO53_RS17505;old_locus_tag=CCO53_17475 NZ_NPLZ01000010.1 Protein Homology CDS 129588 131504 . - 0 ID=cds-WP_000093287.1;Parent=gene-CCO53_RS17505;Dbxref=GenBank:WP_000093287.1;Name=WP_000093287.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=CCO53_RS17505;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093287.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 132038 132400 . + . ID=gene-CCO53_RS17515;Name=CCO53_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17515;old_locus_tag=CCO53_17485 NZ_NPLZ01000010.1 Protein Homology CDS 132038 132400 . + 0 ID=cds-WP_000479643.1;Parent=gene-CCO53_RS17515;Dbxref=GenBank:WP_000479643.1;Name=WP_000479643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=CCO53_RS17515;product=DUF3302 domain-containing protein;protein_id=WP_000479643.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 132403 133539 . + . ID=gene-CCO53_RS17520;Name=CCO53_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17520;old_locus_tag=CCO53_17490 NZ_NPLZ01000010.1 Protein Homology CDS 132403 133539 . + 0 ID=cds-WP_000364909.1;Parent=gene-CCO53_RS17520;Dbxref=GenBank:WP_000364909.1;Name=WP_000364909.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=CCO53_RS17520;product=HlyD family secretion protein;protein_id=WP_000364909.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 133637 134245 . + . ID=gene-CCO53_RS17525;Name=CCO53_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17525;old_locus_tag=CCO53_17495 NZ_NPLZ01000010.1 Protein Homology CDS 133637 134245 . + 0 ID=cds-WP_000766677.1;Parent=gene-CCO53_RS17525;Dbxref=GenBank:WP_000766677.1;Name=WP_000766677.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=CCO53_RS17525;product=glutathione S-transferase;protein_id=WP_000766677.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 134344 135735 . + . ID=gene-CCO53_RS17530;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=CCO53_RS17530;old_locus_tag=CCO53_17500 NZ_NPLZ01000010.1 Protein Homology CDS 134344 135735 . + 0 ID=cds-WP_023201728.1;Parent=gene-CCO53_RS17530;Dbxref=GenBank:WP_023201728.1;Name=WP_023201728.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=CCO53_RS17530;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_023201728.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 135732 137582 . + . ID=gene-CCO53_RS17535;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=CCO53_RS17535;old_locus_tag=CCO53_17505 NZ_NPLZ01000010.1 Protein Homology CDS 135732 137582 . + 0 ID=cds-WP_058331583.1;Parent=gene-CCO53_RS17535;Dbxref=GenBank:WP_058331583.1;Name=WP_058331583.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=CCO53_RS17535;product=selenocysteine-specific translation elongation factor;protein_id=WP_058331583.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 137830 138711 . - . ID=gene-CCO53_RS17540;Name=CCO53_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17540;old_locus_tag=CCO53_17510 NZ_NPLZ01000010.1 Protein Homology CDS 137830 138711 . - 0 ID=cds-WP_001188282.1;Parent=gene-CCO53_RS17540;Dbxref=GenBank:WP_001188282.1;Name=WP_001188282.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=CCO53_RS17540;product=ROK family protein;protein_id=WP_001188282.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 138880 140418 . + . ID=gene-CCO53_RS17545;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=CCO53_RS17545;old_locus_tag=CCO53_17515 NZ_NPLZ01000010.1 Protein Homology CDS 138880 140418 . + 0 ID=cds-WP_000183988.1;Parent=gene-CCO53_RS17545;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=CCO53_RS17545;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 140704 142659 . - . ID=gene-CCO53_RS17555;Name=CCO53_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17555;old_locus_tag=CCO53_17525 NZ_NPLZ01000010.1 Protein Homology CDS 140704 142659 . - 0 ID=cds-WP_001650977.1;Parent=gene-CCO53_RS17555;Dbxref=GenBank:WP_001650977.1;Name=WP_001650977.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=CCO53_RS17555;product=glycoside hydrolase family 127 protein;protein_id=WP_001650977.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 142923 143738 . + . ID=gene-CCO53_RS17560;Name=CCO53_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17560;old_locus_tag=CCO53_17530 NZ_NPLZ01000010.1 Protein Homology CDS 142923 143738 . + 0 ID=cds-WP_000891808.1;Parent=gene-CCO53_RS17560;Dbxref=GenBank:WP_000891808.1;Name=WP_000891808.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=CCO53_RS17560;product=AraC family transcriptional regulator;protein_id=WP_000891808.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 143899 144594 . - . ID=gene-CCO53_RS17565;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO53_RS17565;old_locus_tag=CCO53_17535 NZ_NPLZ01000010.1 Protein Homology CDS 143899 144594 . - 0 ID=cds-WP_000893174.1;Parent=gene-CCO53_RS17565;Dbxref=GenBank:WP_000893174.1;Name=WP_000893174.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=CCO53_RS17565;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893174.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 144588 145448 . - . ID=gene-CCO53_RS17570;Name=CCO53_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17570;old_locus_tag=CCO53_17540 NZ_NPLZ01000010.1 Protein Homology CDS 144588 145448 . - 0 ID=cds-WP_001244041.1;Parent=gene-CCO53_RS17570;Dbxref=GenBank:WP_001244041.1;Name=WP_001244041.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=CCO53_RS17570;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001244041.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 145441 146103 . - . ID=gene-CCO53_RS17575;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO53_RS17575;old_locus_tag=CCO53_17545 NZ_NPLZ01000010.1 Protein Homology CDS 145441 146103 . - 0 ID=cds-WP_094887767.1;Parent=gene-CCO53_RS17575;Dbxref=GenBank:WP_094887767.1;Name=WP_094887767.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=CCO53_RS17575;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_094887767.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 146100 147596 . - . ID=gene-CCO53_RS17580;Name=CCO53_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17580;old_locus_tag=CCO53_17550 NZ_NPLZ01000010.1 Protein Homology CDS 146100 147596 . - 0 ID=cds-WP_000074080.1;Parent=gene-CCO53_RS17580;Dbxref=GenBank:WP_000074080.1;Name=WP_000074080.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=CCO53_RS17580;product=FGGY-family carbohydrate kinase;protein_id=WP_000074080.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 147600 148586 . - . ID=gene-CCO53_RS17585;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=CCO53_RS17585;old_locus_tag=CCO53_17555 NZ_NPLZ01000010.1 Protein Homology CDS 147600 148586 . - 0 ID=cds-WP_000766341.1;Parent=gene-CCO53_RS17585;Dbxref=GenBank:WP_000766341.1;Name=WP_000766341.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=CCO53_RS17585;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766341.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 148598 149875 . - . ID=gene-CCO53_RS17590;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=CCO53_RS17590;old_locus_tag=CCO53_17560 NZ_NPLZ01000010.1 Protein Homology CDS 148598 149875 . - 0 ID=cds-WP_000301822.1;Parent=gene-CCO53_RS17590;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=CCO53_RS17590;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 149878 150351 . - . ID=gene-CCO53_RS17595;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=CCO53_RS17595;old_locus_tag=CCO53_17565 NZ_NPLZ01000010.1 Protein Homology CDS 149878 150351 . - 0 ID=cds-WP_000832317.1;Parent=gene-CCO53_RS17595;Dbxref=GenBank:WP_000832317.1;Name=WP_000832317.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=CCO53_RS17595;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832317.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 150490 151422 . - . ID=gene-CCO53_RS17600;Name=CCO53_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17600;old_locus_tag=CCO53_17570 NZ_NPLZ01000010.1 Protein Homology CDS 150490 151422 . - 0 ID=cds-WP_000794987.1;Parent=gene-CCO53_RS17600;Dbxref=GenBank:WP_000794987.1;Name=WP_000794987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=CCO53_RS17600;product=DUF4862 family protein;protein_id=WP_000794987.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 151446 151910 . - . ID=gene-CCO53_RS17605;Name=CCO53_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17605;old_locus_tag=CCO53_17575 NZ_NPLZ01000010.1 Protein Homology CDS 151446 151910 . - 0 ID=cds-WP_094887768.1;Parent=gene-CCO53_RS17605;Dbxref=GenBank:WP_094887768.1;Name=WP_094887768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=CCO53_RS17605;product=YhcH/YjgK/YiaL family protein;protein_id=WP_094887768.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 151922 152920 . - . ID=gene-CCO53_RS17610;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=CCO53_RS17610;old_locus_tag=CCO53_17580 NZ_NPLZ01000010.1 Protein Homology CDS 151922 152920 . - 0 ID=cds-WP_000869012.1;Parent=gene-CCO53_RS17610;Dbxref=GenBank:WP_000869012.1;Name=WP_000869012.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=CCO53_RS17610;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869012.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 153150 153950 . + . ID=gene-CCO53_RS17615;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=CCO53_RS17615;old_locus_tag=CCO53_17585 NZ_NPLZ01000010.1 Protein Homology CDS 153150 153950 . + 0 ID=cds-WP_000081338.1;Parent=gene-CCO53_RS17615;Dbxref=GenBank:WP_000081338.1;Name=WP_000081338.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=CCO53_RS17615;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081338.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 154067 154540 . + . ID=gene-CCO53_RS17620;Name=CCO53_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17620;old_locus_tag=CCO53_17590 NZ_NPLZ01000010.1 Protein Homology CDS 154067 154540 . + 0 ID=cds-WP_001078817.1;Parent=gene-CCO53_RS17620;Dbxref=GenBank:WP_001078817.1;Name=WP_001078817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=CCO53_RS17620;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078817.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 154577 155827 . - . ID=gene-CCO53_RS17625;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=CCO53_RS17625;old_locus_tag=CCO53_17595 NZ_NPLZ01000010.1 Protein Homology CDS 154577 155827 . - 0 ID=cds-WP_000144379.1;Parent=gene-CCO53_RS17625;Dbxref=GenBank:WP_000144379.1;Name=WP_000144379.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=CCO53_RS17625;product=valine--pyruvate transaminase;protein_id=WP_000144379.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 156001 158028 . - . ID=gene-CCO53_RS17630;Name=CCO53_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17630;old_locus_tag=CCO53_17600 NZ_NPLZ01000010.1 Protein Homology CDS 156001 158028 . - 0 ID=cds-WP_058331579.1;Parent=gene-CCO53_RS17630;Dbxref=GenBank:WP_058331579.1;Name=WP_058331579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=CCO53_RS17630;product=alpha-amylase;protein_id=WP_058331579.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 158344 159168 . + . ID=gene-CCO53_RS17635;Name=CCO53_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17635;old_locus_tag=CCO53_17605 NZ_NPLZ01000010.1 Protein Homology CDS 158344 159168 . + 0 ID=cds-WP_024146110.1;Parent=gene-CCO53_RS17635;Dbxref=GenBank:WP_024146110.1;Name=WP_024146110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=CCO53_RS17635;product=protein bax;protein_id=WP_024146110.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 159229 160407 . - . ID=gene-CCO53_RS17640;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=CCO53_RS17640;old_locus_tag=CCO53_17610 NZ_NPLZ01000010.1 Protein Homology CDS 159229 160407 . - 0 ID=cds-WP_000459824.1;Parent=gene-CCO53_RS17640;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=CCO53_RS17640;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 160770 162092 . + . ID=gene-CCO53_RS17650;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=CCO53_RS17650;old_locus_tag=CCO53_17620 NZ_NPLZ01000010.1 Protein Homology CDS 160770 162092 . + 0 ID=cds-WP_001149561.1;Parent=gene-CCO53_RS17650;Dbxref=GenBank:WP_001149561.1;Name=WP_001149561.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=CCO53_RS17650;product=xylose isomerase;protein_id=WP_001149561.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 162192 163646 . + . ID=gene-CCO53_RS17655;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=CCO53_RS17655;old_locus_tag=CCO53_17625 NZ_NPLZ01000010.1 Protein Homology CDS 162192 163646 . + 0 ID=cds-WP_000275322.1;Parent=gene-CCO53_RS17655;Dbxref=GenBank:WP_000275322.1;Name=WP_000275322.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=CCO53_RS17655;product=xylulokinase;protein_id=WP_000275322.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 163821 164174 . + . ID=gene-CCO53_RS17660;Name=CCO53_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17660;old_locus_tag=CCO53_17630 NZ_NPLZ01000010.1 Protein Homology CDS 163821 164174 . + 0 ID=cds-WP_000340935.1;Parent=gene-CCO53_RS17660;Dbxref=GenBank:WP_000340935.1;Name=WP_000340935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=CCO53_RS17660;product=YiaA/YiaB family protein;protein_id=WP_000340935.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 164197 165192 . - . ID=gene-CCO53_RS17665;Name=CCO53_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17665;old_locus_tag=CCO53_17635 NZ_NPLZ01000010.1 Protein Homology CDS 164197 165192 . - 0 ID=cds-WP_001182574.1;Parent=gene-CCO53_RS17665;Dbxref=GenBank:WP_001182574.1;Name=WP_001182574.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=CCO53_RS17665;product=acyltransferase;protein_id=WP_001182574.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 165358 165660 . + . ID=gene-CCO53_RS17675;Name=CCO53_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17675;old_locus_tag=CCO53_17645 NZ_NPLZ01000010.1 Protein Homology CDS 165358 165660 . + 0 ID=cds-WP_000605592.1;Parent=gene-CCO53_RS17675;Dbxref=GenBank:WP_000605592.1;Name=WP_000605592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=CCO53_RS17675;product=YsaB family lipoprotein;protein_id=WP_000605592.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 165799 166710 . + . ID=gene-CCO53_RS17680;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=CCO53_RS17680;old_locus_tag=CCO53_17650 NZ_NPLZ01000010.1 Protein Homology CDS 165799 166710 . + 0 ID=cds-WP_001168551.1;Parent=gene-CCO53_RS17680;Dbxref=GenBank:WP_001168551.1;Name=WP_001168551.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=CCO53_RS17680;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168551.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 166720 168789 . + . ID=gene-CCO53_RS17685;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=CCO53_RS17685;old_locus_tag=CCO53_17655 NZ_NPLZ01000010.1 Protein Homology CDS 166720 168789 . + 0 ID=cds-WP_023201737.1;Parent=gene-CCO53_RS17685;Dbxref=GenBank:WP_023201737.1;Name=WP_023201737.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=CCO53_RS17685;product=glycine--tRNA ligase subunit beta;protein_id=WP_023201737.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq pseudogene 169252 169683 . + . ID=gene-CCO53_RS24090;Name=CCO53_RS24090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24090;partial=true;pseudo=true;start_range=.,169252 NZ_NPLZ01000010.1 Protein Homology CDS 169252 169683 . + 0 ID=cds-CCO53_RS24090;Parent=gene-CCO53_RS24090;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=CCO53_RS24090;partial=true;product=transposase;pseudo=true;start_range=.,169252;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 169802 170452 . - . ID=gene-CCO53_RS17700;Name=CCO53_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17700;old_locus_tag=CCO53_17670 NZ_NPLZ01000010.1 Protein Homology CDS 169802 170452 . - 0 ID=cds-WP_023993641.1;Parent=gene-CCO53_RS17700;Dbxref=GenBank:WP_023993641.1;Name=WP_023993641.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247421.1;locus_tag=CCO53_RS17700;product=GntR family transcriptional regulator;protein_id=WP_023993641.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 170537 171739 . + . ID=gene-CCO53_RS17705;Name=CCO53_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17705;old_locus_tag=CCO53_17675 NZ_NPLZ01000010.1 Protein Homology CDS 170537 171739 . + 0 ID=cds-WP_023201740.1;Parent=gene-CCO53_RS17705;Dbxref=GenBank:WP_023201740.1;Name=WP_023201740.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628845.1;locus_tag=CCO53_RS17705;product=MFS transporter;protein_id=WP_023201740.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq pseudogene 171780 172386 . + . ID=gene-CCO53_RS17710;Name=CCO53_RS17710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS17710;old_locus_tag=CCO53_17680;pseudo=true NZ_NPLZ01000010.1 Protein Homology CDS 171780 172386 . + 0 ID=cds-CCO53_RS17710;Parent=gene-CCO53_RS17710;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227035.1;locus_tag=CCO53_RS17710;product=cysteine hydrolase family protein;pseudo=true;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 172552 172839 . + . ID=gene-CCO53_RS17715;Name=CCO53_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17715;old_locus_tag=CCO53_17685 NZ_NPLZ01000010.1 Protein Homology CDS 172552 172839 . + 0 ID=cds-WP_000965889.1;Parent=gene-CCO53_RS17715;Dbxref=GenBank:WP_000965889.1;Name=WP_000965889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=CCO53_RS17715;product=DUF1778 domain-containing protein;protein_id=WP_000965889.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 172827 173312 . + . ID=gene-CCO53_RS17720;Name=CCO53_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17720;old_locus_tag=CCO53_17690 NZ_NPLZ01000010.1 Protein Homology CDS 172827 173312 . + 0 ID=cds-WP_023198715.1;Parent=gene-CCO53_RS17720;Dbxref=GenBank:WP_023198715.1;Name=WP_023198715.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=CCO53_RS17720;product=GNAT family N-acetyltransferase;protein_id=WP_023198715.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 173683 174222 . - . ID=gene-CCO53_RS17725;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=CCO53_RS17725;old_locus_tag=CCO53_17695 NZ_NPLZ01000010.1 Protein Homology CDS 173683 174222 . - 0 ID=cds-WP_000047141.1;Parent=gene-CCO53_RS17725;Dbxref=GenBank:WP_000047141.1;Name=WP_000047141.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=CCO53_RS17725;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047141.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 174396 174608 . - . ID=gene-CCO53_RS17730;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO53_RS17730;old_locus_tag=CCO53_17700 NZ_NPLZ01000010.1 Protein Homology CDS 174396 174608 . - 0 ID=cds-WP_000014594.1;Parent=gene-CCO53_RS17730;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=CCO53_RS17730;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 174896 175186 . - . ID=gene-CCO53_RS17735;Name=CCO53_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17735;old_locus_tag=CCO53_17705 NZ_NPLZ01000010.1 Protein Homology CDS 174896 175186 . - 0 ID=cds-WP_000455790.1;Parent=gene-CCO53_RS17735;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=CCO53_RS17735;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 175625 176335 . + . ID=gene-CCO53_RS17740;Name=CCO53_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17740;old_locus_tag=CCO53_17710 NZ_NPLZ01000010.1 Protein Homology CDS 175625 176335 . + 0 ID=cds-WP_000190524.1;Parent=gene-CCO53_RS17740;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=CCO53_RS17740;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 176385 177359 . - . ID=gene-CCO53_RS17745;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=CCO53_RS17745;old_locus_tag=CCO53_17715 NZ_NPLZ01000010.1 Protein Homology CDS 176385 177359 . - 0 ID=cds-WP_000804682.1;Parent=gene-CCO53_RS17745;Dbxref=GenBank:WP_000804682.1;Name=WP_000804682.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=CCO53_RS17745;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000804682.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 177578 178240 . - . ID=gene-CCO53_RS17750;Name=CCO53_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17750;old_locus_tag=CCO53_17720 NZ_NPLZ01000010.1 Protein Homology CDS 177578 178240 . - 0 ID=cds-WP_000747548.1;Parent=gene-CCO53_RS17750;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=CCO53_RS17750;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 178393 180726 . + . ID=gene-CCO53_RS17755;Name=CCO53_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17755;old_locus_tag=CCO53_17725 NZ_NPLZ01000010.1 Protein Homology CDS 178393 180726 . + 0 ID=cds-WP_000148456.1;Parent=gene-CCO53_RS17755;Dbxref=GenBank:WP_000148456.1;Name=WP_000148456.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=CCO53_RS17755;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_000148456.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 180695 181135 . - . ID=gene-CCO53_RS17760;Name=CCO53_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17760;old_locus_tag=CCO53_17730 NZ_NPLZ01000010.1 Protein Homology CDS 180695 181135 . - 0 ID=cds-WP_000619902.1;Parent=gene-CCO53_RS17760;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=CCO53_RS17760;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 181113 181694 . - . ID=gene-CCO53_RS17765;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=CCO53_RS17765;old_locus_tag=CCO53_17735 NZ_NPLZ01000010.1 Protein Homology CDS 181113 181694 . - 0 ID=cds-WP_001188419.1;Parent=gene-CCO53_RS17765;Dbxref=GenBank:WP_001188419.1;Name=WP_001188419.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=CCO53_RS17765;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188419.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 181850 182554 . + . ID=gene-CCO53_RS17770;Name=CCO53_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17770;old_locus_tag=CCO53_17740 NZ_NPLZ01000010.1 Protein Homology CDS 181850 182554 . + 0 ID=cds-WP_000637069.1;Parent=gene-CCO53_RS17770;Dbxref=GenBank:WP_000637069.1;Name=WP_000637069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=CCO53_RS17770;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637069.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 182785 184476 . + . ID=gene-CCO53_RS17775;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=CCO53_RS17775;old_locus_tag=CCO53_17745 NZ_NPLZ01000010.1 Protein Homology CDS 182785 184476 . + 0 ID=cds-WP_001269257.1;Parent=gene-CCO53_RS17775;Dbxref=GenBank:WP_001269257.1;Name=WP_001269257.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=CCO53_RS17775;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269257.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 184567 184643 . + . ID=gene-CCO53_RS17780;Name=CCO53_RS17780;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS17780;old_locus_tag=CCO53_17750 NZ_NPLZ01000010.1 tRNAscan-SE tRNA 184567 184643 . + . ID=rna-CCO53_RS17780;Parent=gene-CCO53_RS17780;anticodon=(pos:184601..184603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS17780;product=tRNA-Pro NZ_NPLZ01000010.1 tRNAscan-SE exon 184567 184643 . + . ID=exon-CCO53_RS17780-1;Parent=rna-CCO53_RS17780;anticodon=(pos:184601..184603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS17780;product=tRNA-Pro NZ_NPLZ01000010.1 RefSeq gene 184678 184811 . + . ID=gene-CCO53_RS17785;Name=CCO53_RS17785;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO53_RS17785;old_locus_tag=CCO53_17755 NZ_NPLZ01000010.1 cmsearch ncRNA 184678 184811 . + . ID=rna-CCO53_RS17785;Parent=gene-CCO53_RS17785;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS17785;product=RtT sRNA NZ_NPLZ01000010.1 cmsearch exon 184678 184811 . + . ID=exon-CCO53_RS17785-1;Parent=rna-CCO53_RS17785;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS17785;product=RtT sRNA NZ_NPLZ01000010.1 RefSeq gene 184846 184979 . + . ID=gene-CCO53_RS17790;Name=CCO53_RS17790;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO53_RS17790;old_locus_tag=CCO53_17760 NZ_NPLZ01000010.1 cmsearch ncRNA 184846 184979 . + . ID=rna-CCO53_RS17790;Parent=gene-CCO53_RS17790;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS17790;product=RtT sRNA NZ_NPLZ01000010.1 cmsearch exon 184846 184979 . + . ID=exon-CCO53_RS17790-1;Parent=rna-CCO53_RS17790;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS17790;product=RtT sRNA NZ_NPLZ01000010.1 RefSeq gene 185162 185527 . + . ID=gene-CCO53_RS17795;Name=CCO53_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17795;old_locus_tag=CCO53_17765 NZ_NPLZ01000010.1 Protein Homology CDS 185162 185527 . + 0 ID=cds-WP_023201742.1;Parent=gene-CCO53_RS17795;Dbxref=GenBank:WP_023201742.1;Name=WP_023201742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091330.1;locus_tag=CCO53_RS17795;product=phage integrase central domain-containing protein;protein_id=WP_023201742.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 185867 187834 . + . ID=gene-CCO53_RS17800;Name=CCO53_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17800;old_locus_tag=CCO53_17770 NZ_NPLZ01000010.1 Protein Homology CDS 185867 187834 . + 0 ID=cds-WP_094887769.1;Parent=gene-CCO53_RS17800;Dbxref=GenBank:WP_094887769.1;Name=WP_094887769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484537.1;locus_tag=CCO53_RS17800;product=AlbA family DNA-binding domain-containing protein;protein_id=WP_094887769.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 187907 188914 . - . ID=gene-CCO53_RS17805;Name=CCO53_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17805;old_locus_tag=CCO53_17775 NZ_NPLZ01000010.1 Protein Homology CDS 187907 188914 . - 0 ID=cds-WP_000290700.1;Parent=gene-CCO53_RS17805;Dbxref=GenBank:WP_000290700.1;Name=WP_000290700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=CCO53_RS17805;product=substrate-binding domain-containing protein;protein_id=WP_000290700.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 189064 190188 . + . ID=gene-CCO53_RS17810;Name=CCO53_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17810;old_locus_tag=CCO53_17780 NZ_NPLZ01000010.1 Protein Homology CDS 189064 190188 . + 0 ID=cds-WP_000940803.1;Parent=gene-CCO53_RS17810;Dbxref=GenBank:WP_000940803.1;Name=WP_000940803.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=CCO53_RS17810;product=aryl-sulfate sulfotransferase;protein_id=WP_000940803.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 190246 191571 . + . ID=gene-CCO53_RS17815;Name=CCO53_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17815;old_locus_tag=CCO53_17785 NZ_NPLZ01000010.1 Protein Homology CDS 190246 191571 . + 0 ID=cds-WP_001136080.1;Parent=gene-CCO53_RS17815;Dbxref=GenBank:WP_001136080.1;Name=WP_001136080.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=CCO53_RS17815;product=uracil-xanthine permease family protein;protein_id=WP_001136080.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 192127 193734 . + . ID=gene-CCO53_RS17820;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=CCO53_RS17820;old_locus_tag=CCO53_17790 NZ_NPLZ01000010.1 Protein Homology CDS 192127 193734 . + 0 ID=cds-WP_000028047.1;Parent=gene-CCO53_RS17820;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=CCO53_RS17820;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 193891 194910 . + . ID=gene-CCO53_RS17825;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=CCO53_RS17825;old_locus_tag=CCO53_17795 NZ_NPLZ01000010.1 Protein Homology CDS 193891 194910 . + 0 ID=cds-WP_045342487.1;Parent=gene-CCO53_RS17825;Dbxref=GenBank:WP_045342487.1;Name=WP_045342487.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=CCO53_RS17825;product=dipeptide ABC transporter permease DppB;protein_id=WP_045342487.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 194920 195822 . + . ID=gene-CCO53_RS17830;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=CCO53_RS17830;old_locus_tag=CCO53_17800 NZ_NPLZ01000010.1 Protein Homology CDS 194920 195822 . + 0 ID=cds-WP_000084690.1;Parent=gene-CCO53_RS17830;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=CCO53_RS17830;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 195833 196816 . + . ID=gene-CCO53_RS17835;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=CCO53_RS17835;old_locus_tag=CCO53_17805 NZ_NPLZ01000010.1 Protein Homology CDS 195833 196816 . + 0 ID=cds-WP_001196509.1;Parent=gene-CCO53_RS17835;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=CCO53_RS17835;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 196813 197826 . + . ID=gene-CCO53_RS17840;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=CCO53_RS17840;old_locus_tag=CCO53_17810 NZ_NPLZ01000010.1 Protein Homology CDS 196813 197826 . + 0 ID=cds-WP_000103563.1;Parent=gene-CCO53_RS17840;Dbxref=GenBank:WP_000103563.1;Name=WP_000103563.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=CCO53_RS17840;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000103563.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq gene 197927 199225 . - . ID=gene-CCO53_RS17845;Name=CCO53_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17845;old_locus_tag=CCO53_17815 NZ_NPLZ01000010.1 Protein Homology CDS 197927 199225 . - 0 ID=cds-WP_001150163.1;Parent=gene-CCO53_RS17845;Dbxref=GenBank:WP_001150163.1;Name=WP_001150163.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=CCO53_RS17845;product=aromatic amino acid transport family protein;protein_id=WP_001150163.1;transl_table=11 NZ_NPLZ01000010.1 RefSeq pseudogene 199343 199495 . - . ID=gene-CCO53_RS24095;Name=CCO53_RS24095;end_range=199495,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24095;old_locus_tag=CCO53_17820;partial=true;pseudo=true NZ_NPLZ01000010.1 Protein Homology CDS 199343 199495 . - 0 ID=cds-CCO53_RS24095;Parent=gene-CCO53_RS24095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;end_range=199495,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=CCO53_RS24095;partial=true;product=PLP-dependent transferase;pseudo=true;transl_table=11 ##sequence-region NZ_NPLZ01000011.1 1 175791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000011.1 RefSeq region 1 175791 . + . ID=NZ_NPLZ01000011.1:1..175791;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000011.1 RefSeq pseudogene 124 1371 . + . ID=gene-CCO53_RS17860;Name=CCO53_RS17860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS17860;old_locus_tag=CCO53_17830;partial=true;pseudo=true;start_range=.,124 NZ_NPLZ01000011.1 Protein Homology CDS 124 1371 . + 0 ID=cds-CCO53_RS17860;Parent=gene-CCO53_RS17860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=CCO53_RS17860;partial=true;product=AAA domain-containing protein;pseudo=true;start_range=.,124;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 1468 2457 . + . ID=gene-CCO53_RS17865;Name=CCO53_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17865;old_locus_tag=CCO53_17835 NZ_NPLZ01000011.1 Protein Homology CDS 1468 2457 . + 0 ID=cds-WP_077905772.1;Parent=gene-CCO53_RS17865;Dbxref=GenBank:WP_077905772.1;Name=WP_077905772.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463349.1;locus_tag=CCO53_RS17865;product=restriction endonuclease;protein_id=WP_077905772.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 2570 4654 . - . ID=gene-CCO53_RS17870;Name=brxL;gbkey=Gene;gene=brxL;gene_biotype=protein_coding;locus_tag=CCO53_RS17870;old_locus_tag=CCO53_17840 NZ_NPLZ01000011.1 Protein Homology CDS 2570 4654 . - 0 ID=cds-WP_079944398.1;Parent=gene-CCO53_RS17870;Dbxref=GenBank:WP_079944398.1;Name=WP_079944398.1;gbkey=CDS;gene=brxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463350.1;locus_tag=CCO53_RS17870;product=protease Lon-related BREX system protein BrxL;protein_id=WP_079944398.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 4665 7262 . - . ID=gene-CCO53_RS17875;Name=pglZ;gbkey=Gene;gene=pglZ;gene_biotype=protein_coding;locus_tag=CCO53_RS17875;old_locus_tag=CCO53_17845 NZ_NPLZ01000011.1 Protein Homology CDS 4665 7262 . - 0 ID=cds-WP_094887785.1;Parent=gene-CCO53_RS17875;Dbxref=GenBank:WP_094887785.1;Name=WP_094887785.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pglZ;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463351.1;locus_tag=CCO53_RS17875;product=BREX-1 system phosphatase PglZ type A;protein_id=WP_094887785.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 7265 8086 . - . ID=gene-CCO53_RS17880;Name=CCO53_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17880;old_locus_tag=CCO53_17850 NZ_NPLZ01000011.1 Protein Homology CDS 7265 8086 . - 0 ID=cds-WP_079944399.1;Parent=gene-CCO53_RS17880;Dbxref=GenBank:WP_079944399.1;Name=WP_079944399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463352.1;locus_tag=CCO53_RS17880;product=DUF4435 domain-containing protein;protein_id=WP_079944399.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 8064 9152 . - . ID=gene-CCO53_RS17885;Name=CCO53_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17885;old_locus_tag=CCO53_17855 NZ_NPLZ01000011.1 Protein Homology CDS 8064 9152 . - 0 ID=cds-WP_094887771.1;Parent=gene-CCO53_RS17885;Dbxref=GenBank:WP_094887771.1;Name=WP_094887771.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463353.1;locus_tag=CCO53_RS17885;product=ATP-binding protein;protein_id=WP_094887771.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 9152 12808 . - . ID=gene-CCO53_RS17890;Name=pglX;gbkey=Gene;gene=pglX;gene_biotype=protein_coding;locus_tag=CCO53_RS17890;old_locus_tag=CCO53_17860 NZ_NPLZ01000011.1 Protein Homology CDS 9152 12808 . - 0 ID=cds-WP_094887772.1;Parent=gene-CCO53_RS17890;Dbxref=GenBank:WP_094887772.1;Name=WP_094887772.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=pglX;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463354.1;locus_tag=CCO53_RS17890;product=BREX-1 system adenine-specific DNA-methyltransferase PglX;protein_id=WP_094887772.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 12854 16495 . - . ID=gene-CCO53_RS17895;Name=brxC;gbkey=Gene;gene=brxC;gene_biotype=protein_coding;locus_tag=CCO53_RS17895;old_locus_tag=CCO53_17865 NZ_NPLZ01000011.1 Protein Homology CDS 12854 16495 . - 0 ID=cds-WP_094887773.1;Parent=gene-CCO53_RS17895;Dbxref=GenBank:WP_094887773.1;Name=WP_094887773.1;gbkey=CDS;gene=brxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463355.1;locus_tag=CCO53_RS17895;product=BREX system P-loop protein BrxC;protein_id=WP_094887773.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 16507 17109 . - . ID=gene-CCO53_RS17900;Name=CCO53_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17900;old_locus_tag=CCO53_17870 NZ_NPLZ01000011.1 Protein Homology CDS 16507 17109 . - 0 ID=cds-WP_000566905.1;Parent=gene-CCO53_RS17900;Dbxref=GenBank:WP_000566905.1;Name=WP_000566905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463356.1;locus_tag=CCO53_RS17900;product=DUF1788 domain-containing protein;protein_id=WP_000566905.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 17106 17708 . - . ID=gene-CCO53_RS17905;Name=CCO53_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17905;old_locus_tag=CCO53_17875 NZ_NPLZ01000011.1 Protein Homology CDS 17106 17708 . - 0 ID=cds-WP_094887786.1;Parent=gene-CCO53_RS17905;Dbxref=GenBank:WP_094887786.1;Name=WP_094887786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463357.1;locus_tag=CCO53_RS17905;product=DUF1819 family protein;protein_id=WP_094887786.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq pseudogene 17901 18122 . - . ID=gene-CCO53_RS17910;Name=CCO53_RS17910;end_range=18122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS17910;old_locus_tag=CCO53_17880;partial=true;pseudo=true NZ_NPLZ01000011.1 Protein Homology CDS 17901 18122 . - 0 ID=cds-CCO53_RS17910;Parent=gene-CCO53_RS17910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654459.1;locus_tag=CCO53_RS17910;partial=true;product=cell filamentation protein Fic;pseudo=true;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 18535 19251 . - . ID=gene-CCO53_RS17915;Name=CCO53_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17915;old_locus_tag=CCO53_17885 NZ_NPLZ01000011.1 Protein Homology CDS 18535 19251 . - 0 ID=cds-WP_000532939.1;Parent=gene-CCO53_RS17915;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=CCO53_RS17915;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 19812 21443 . - . ID=gene-CCO53_RS17925;Name=CCO53_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17925;old_locus_tag=CCO53_17895 NZ_NPLZ01000011.1 Protein Homology CDS 19812 21443 . - 0 ID=cds-WP_094887774.1;Parent=gene-CCO53_RS17925;Dbxref=GenBank:WP_094887774.1;Name=WP_094887774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=CCO53_RS17925;product=class I SAM-dependent methyltransferase;protein_id=WP_094887774.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 21448 21705 . - . ID=gene-CCO53_RS17930;Name=CCO53_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17930;old_locus_tag=CCO53_17900 NZ_NPLZ01000011.1 Protein Homology CDS 21448 21705 . - 0 ID=cds-WP_001054380.1;Parent=gene-CCO53_RS17930;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=CCO53_RS17930;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 22194 22802 . + . ID=gene-CCO53_RS17940;Name=CCO53_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17940;old_locus_tag=CCO53_17910 NZ_NPLZ01000011.1 Protein Homology CDS 22194 22802 . + 0 ID=cds-WP_000864865.1;Parent=gene-CCO53_RS17940;Dbxref=GenBank:WP_000864865.1;Name=WP_000864865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=CCO53_RS17940;product=DUF1062 domain-containing protein;protein_id=WP_000864865.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 23156 24067 . + . ID=gene-CCO53_RS17945;Name=CCO53_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17945;old_locus_tag=CCO53_17915 NZ_NPLZ01000011.1 Protein Homology CDS 23156 24067 . + 0 ID=cds-WP_061372012.1;Parent=gene-CCO53_RS17945;Dbxref=GenBank:WP_061372012.1;Name=WP_061372012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=CCO53_RS17945;product=STM4504/CBY_0614 family protein;protein_id=WP_061372012.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 24272 24733 . + . ID=gene-CCO53_RS17950;Name=CCO53_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17950;old_locus_tag=CCO53_17920 NZ_NPLZ01000011.1 Protein Homology CDS 24272 24733 . + 0 ID=cds-WP_001642121.1;Parent=gene-CCO53_RS17950;Dbxref=GenBank:WP_001642121.1;Name=WP_001642121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=CCO53_RS17950;product=DUF302 domain-containing protein;protein_id=WP_001642121.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 24730 25404 . - . ID=gene-CCO53_RS17955;Name=CCO53_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17955;old_locus_tag=CCO53_17925 NZ_NPLZ01000011.1 Protein Homology CDS 24730 25404 . - 0 ID=cds-WP_094887775.1;Parent=gene-CCO53_RS17955;Dbxref=GenBank:WP_094887775.1;Name=WP_094887775.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=CCO53_RS17955;product=dienelactone hydrolase family protein;protein_id=WP_094887775.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 25754 26527 . + . ID=gene-CCO53_RS17965;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=CCO53_RS17965;old_locus_tag=CCO53_17935 NZ_NPLZ01000011.1 Protein Homology CDS 25754 26527 . + 0 ID=cds-WP_000841654.1;Parent=gene-CCO53_RS17965;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=CCO53_RS17965;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 26528 27541 . - . ID=gene-CCO53_RS17970;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO53_RS17970;old_locus_tag=CCO53_17940 NZ_NPLZ01000011.1 Protein Homology CDS 26528 27541 . - 0 ID=cds-WP_094887776.1;Parent=gene-CCO53_RS17970;Dbxref=GenBank:WP_094887776.1;Name=WP_094887776.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=CCO53_RS17970;product=tryptophan--tRNA ligase;protein_id=WP_094887776.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 28257 28787 . + . ID=gene-CCO53_RS17975;Name=CCO53_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17975;old_locus_tag=CCO53_17945 NZ_NPLZ01000011.1 Protein Homology CDS 28257 28787 . + 0 ID=cds-WP_000907671.1;Parent=gene-CCO53_RS17975;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=CCO53_RS17975;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 29026 29760 . + . ID=gene-CCO53_RS17985;Name=CCO53_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS17985;old_locus_tag=CCO53_17955 NZ_NPLZ01000011.1 Protein Homology CDS 29026 29760 . + 0 ID=cds-WP_000683247.1;Parent=gene-CCO53_RS17985;Dbxref=GenBank:WP_000683247.1;Name=WP_000683247.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=CCO53_RS17985;product=aspartate/glutamate racemase family protein;protein_id=WP_000683247.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 29766 30674 . - . ID=gene-CCO53_RS17990;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=CCO53_RS17990;old_locus_tag=CCO53_17960 NZ_NPLZ01000011.1 Protein Homology CDS 29766 30674 . - 0 ID=cds-WP_000383513.1;Parent=gene-CCO53_RS17990;Dbxref=GenBank:WP_000383513.1;Name=WP_000383513.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=CCO53_RS17990;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383513.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 30793 31965 . - . ID=gene-CCO53_RS17995;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=CCO53_RS17995;old_locus_tag=CCO53_17965 NZ_NPLZ01000011.1 Protein Homology CDS 30793 31965 . - 0 ID=cds-WP_080160584.1;Parent=gene-CCO53_RS17995;Dbxref=GenBank:WP_080160584.1;Name=WP_080160584.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=CCO53_RS17995;product=beta-aspartyl-peptidase;protein_id=WP_080160584.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 31978 32439 . - . ID=gene-CCO53_RS18000;Name=CCO53_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18000;old_locus_tag=CCO53_17970 NZ_NPLZ01000011.1 Protein Homology CDS 31978 32439 . - 0 ID=cds-WP_000211979.1;Parent=gene-CCO53_RS18000;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=CCO53_RS18000;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 32436 33107 . - . ID=gene-CCO53_RS18005;Name=CCO53_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18005;old_locus_tag=CCO53_17975 NZ_NPLZ01000011.1 Protein Homology CDS 32436 33107 . - 0 ID=cds-WP_000068752.1;Parent=gene-CCO53_RS18005;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=CCO53_RS18005;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 33980 35164 . - . ID=gene-CCO53_RS18010;Name=CCO53_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18010;old_locus_tag=CCO53_17980 NZ_NPLZ01000011.1 Protein Homology CDS 33980 35164 . - 0 ID=cds-WP_080160583.1;Parent=gene-CCO53_RS18010;Dbxref=GenBank:WP_080160583.1;Name=WP_080160583.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=CCO53_RS18010;product=MFS transporter;protein_id=WP_080160583.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 35384 36655 . - . ID=gene-CCO53_RS18015;Name=CCO53_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18015;old_locus_tag=CCO53_17985 NZ_NPLZ01000011.1 Protein Homology CDS 35384 36655 . - 0 ID=cds-WP_001033037.1;Parent=gene-CCO53_RS18015;Dbxref=GenBank:WP_001033037.1;Name=WP_001033037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=CCO53_RS18015;product=DUF445 domain-containing protein;protein_id=WP_001033037.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 36742 37983 . - . ID=gene-CCO53_RS18020;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=CCO53_RS18020;old_locus_tag=CCO53_17990 NZ_NPLZ01000011.1 Protein Homology CDS 36742 37983 . - 0 ID=cds-WP_001188918.1;Parent=gene-CCO53_RS18020;Dbxref=GenBank:WP_001188918.1;Name=WP_001188918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=CCO53_RS18020;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 38462 39427 . + . ID=gene-CCO53_RS18025;Name=CCO53_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18025;old_locus_tag=CCO53_17995 NZ_NPLZ01000011.1 Protein Homology CDS 38462 39427 . + 0 ID=cds-WP_000749992.1;Parent=gene-CCO53_RS18025;Dbxref=GenBank:WP_000749992.1;Name=WP_000749992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=CCO53_RS18025;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749992.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 39608 40978 . + . ID=gene-CCO53_RS18030;Name=CCO53_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18030;old_locus_tag=CCO53_18000 NZ_NPLZ01000011.1 Protein Homology CDS 39608 40978 . + 0 ID=cds-WP_058331411.1;Parent=gene-CCO53_RS18030;Dbxref=GenBank:WP_058331411.1;Name=WP_058331411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=CCO53_RS18030;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_058331411.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 41073 41216 . - . ID=gene-CCO53_RS18035;Name=CCO53_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18035;old_locus_tag=CCO53_18005 NZ_NPLZ01000011.1 Protein Homology CDS 41073 41216 . - 0 ID=cds-WP_001541460.1;Parent=gene-CCO53_RS18035;Dbxref=GenBank:WP_001541460.1;Name=WP_001541460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=CCO53_RS18035;product=hypothetical protein;protein_id=WP_001541460.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 41183 41347 . + . ID=gene-CCO53_RS18040;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=CCO53_RS18040;old_locus_tag=CCO53_18010 NZ_NPLZ01000011.1 Protein Homology CDS 41183 41347 . + 0 ID=cds-WP_000397915.1;Parent=gene-CCO53_RS18040;Dbxref=GenBank:WP_000397915.1;Name=WP_000397915.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=CCO53_RS18040;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397915.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 41424 42344 . - . ID=gene-CCO53_RS18045;Name=CCO53_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18045;old_locus_tag=CCO53_18015 NZ_NPLZ01000011.1 Protein Homology CDS 41424 42344 . - 0 ID=cds-WP_058331410.1;Parent=gene-CCO53_RS18045;Dbxref=GenBank:WP_058331410.1;Name=WP_058331410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=CCO53_RS18045;product=DUF5655 domain-containing protein;protein_id=WP_058331410.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 42755 43396 . - . ID=gene-CCO53_RS18050;Name=CCO53_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18050;old_locus_tag=CCO53_18020 NZ_NPLZ01000011.1 Protein Homology CDS 42755 43396 . - 0 ID=cds-WP_058331409.1;Parent=gene-CCO53_RS18050;Dbxref=GenBank:WP_058331409.1;Name=WP_058331409.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727645.1;locus_tag=CCO53_RS18050;product=LysE family translocator;protein_id=WP_058331409.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 43444 44259 . - . ID=gene-CCO53_RS18055;Name=CCO53_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18055;old_locus_tag=CCO53_18025 NZ_NPLZ01000011.1 Protein Homology CDS 43444 44259 . - 0 ID=cds-WP_058331408.1;Parent=gene-CCO53_RS18055;Dbxref=GenBank:WP_058331408.1;Name=WP_058331408.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001128428.1;locus_tag=CCO53_RS18055;product=AraC family transcriptional regulator;protein_id=WP_058331408.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 44297 45253 . - . ID=gene-CCO53_RS18060;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=CCO53_RS18060;old_locus_tag=CCO53_18030 NZ_NPLZ01000011.1 Protein Homology CDS 44297 45253 . - 0 ID=cds-WP_000187838.1;Parent=gene-CCO53_RS18060;Dbxref=GenBank:WP_000187838.1;Name=WP_000187838.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=CCO53_RS18060;product=GTPase;protein_id=WP_000187838.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 45264 45467 . - . ID=gene-CCO53_RS18065;Name=CCO53_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18065;old_locus_tag=CCO53_18035 NZ_NPLZ01000011.1 Protein Homology CDS 45264 45467 . - 0 ID=cds-WP_000460616.1;Parent=gene-CCO53_RS18065;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=CCO53_RS18065;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 45562 47712 . - . ID=gene-CCO53_RS18070;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=CCO53_RS18070;old_locus_tag=CCO53_18040 NZ_NPLZ01000011.1 Protein Homology CDS 45562 47712 . - 0 ID=cds-WP_094887778.1;Parent=gene-CCO53_RS18070;Dbxref=GenBank:WP_094887778.1;Name=WP_094887778.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=CCO53_RS18070;product=pyruvate/proton symporter BtsT;protein_id=WP_094887778.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 48079 49740 . + . ID=gene-CCO53_RS18075;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=CCO53_RS18075;old_locus_tag=CCO53_18045 NZ_NPLZ01000011.1 Protein Homology CDS 48079 49740 . + 0 ID=cds-WP_000919507.1;Parent=gene-CCO53_RS18075;Dbxref=GenBank:WP_000919507.1;Name=WP_000919507.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=CCO53_RS18075;product=methyl-accepting chemotaxis protein;protein_id=WP_000919507.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq pseudogene 49852 49926 . - . ID=gene-CCO53_RS24100;Name=CCO53_RS24100;end_range=49926,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24100;partial=true;pseudo=true NZ_NPLZ01000011.1 Protein Homology CDS 49852 49926 . - 0 ID=cds-CCO53_RS24100;Parent=gene-CCO53_RS24100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=49926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134222.1;locus_tag=CCO53_RS24100;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 50063 52828 . + . ID=gene-CCO53_RS18080;Name=CCO53_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18080;old_locus_tag=CCO53_18050 NZ_NPLZ01000011.1 Protein Homology CDS 50063 52828 . + 0 ID=cds-WP_001224215.1;Parent=gene-CCO53_RS18080;Dbxref=GenBank:WP_001224215.1;Name=WP_001224215.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=CCO53_RS18080;product=sigma 54-interacting transcriptional regulator;protein_id=WP_001224215.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 52930 53352 . + . ID=gene-CCO53_RS18085;Name=CCO53_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18085;old_locus_tag=CCO53_18055 NZ_NPLZ01000011.1 Protein Homology CDS 52930 53352 . + 0 ID=cds-WP_000820693.1;Parent=gene-CCO53_RS18085;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=CCO53_RS18085;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 53367 53828 . + . ID=gene-CCO53_RS18090;Name=CCO53_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18090;old_locus_tag=CCO53_18060 NZ_NPLZ01000011.1 Protein Homology CDS 53367 53828 . + 0 ID=cds-WP_000634727.1;Parent=gene-CCO53_RS18090;Dbxref=GenBank:WP_000634727.1;Name=WP_000634727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=CCO53_RS18090;product=PTS sugar transporter subunit IIB;protein_id=WP_000634727.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 53854 54633 . + . ID=gene-CCO53_RS18095;Name=CCO53_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18095;old_locus_tag=CCO53_18065 NZ_NPLZ01000011.1 Protein Homology CDS 53854 54633 . + 0 ID=cds-WP_000228866.1;Parent=gene-CCO53_RS18095;Dbxref=GenBank:WP_000228866.1;Name=WP_000228866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=CCO53_RS18095;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228866.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 54611 55459 . + . ID=gene-CCO53_RS18100;Name=CCO53_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18100;old_locus_tag=CCO53_18070 NZ_NPLZ01000011.1 Protein Homology CDS 54611 55459 . + 0 ID=cds-WP_000178062.1;Parent=gene-CCO53_RS18100;Dbxref=GenBank:WP_000178062.1;Name=WP_000178062.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=CCO53_RS18100;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178062.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 55472 56533 . + . ID=gene-CCO53_RS18105;Name=CCO53_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18105;old_locus_tag=CCO53_18075 NZ_NPLZ01000011.1 Protein Homology CDS 55472 56533 . + 0 ID=cds-WP_000075428.1;Parent=gene-CCO53_RS18105;Dbxref=GenBank:WP_000075428.1;Name=WP_000075428.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=CCO53_RS18105;product=SIS domain-containing protein;protein_id=WP_000075428.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 56551 57561 . + . ID=gene-CCO53_RS18110;Name=CCO53_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18110;old_locus_tag=CCO53_18080 NZ_NPLZ01000011.1 Protein Homology CDS 56551 57561 . + 0 ID=cds-WP_000900313.1;Parent=gene-CCO53_RS18110;Dbxref=GenBank:WP_000900313.1;Name=WP_000900313.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=CCO53_RS18110;product=SIS domain-containing protein;protein_id=WP_000900313.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 57695 59986 . - . ID=gene-CCO53_RS18115;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=CCO53_RS18115;old_locus_tag=CCO53_18085 NZ_NPLZ01000011.1 Protein Homology CDS 57695 59986 . - 0 ID=cds-WP_094887779.1;Parent=gene-CCO53_RS18115;Dbxref=GenBank:WP_094887779.1;Name=WP_094887779.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=CCO53_RS18115;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_094887779.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 60269 60730 . - . ID=gene-CCO53_RS18120;Name=CCO53_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18120;old_locus_tag=CCO53_18090 NZ_NPLZ01000011.1 Protein Homology CDS 60269 60730 . - 0 ID=cds-WP_001090314.1;Parent=gene-CCO53_RS18120;Dbxref=GenBank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=CCO53_RS18120;product=DUF2501 domain-containing protein;protein_id=WP_001090314.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 60788 61525 . - . ID=gene-CCO53_RS18125;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=CCO53_RS18125;old_locus_tag=CCO53_18095 NZ_NPLZ01000011.1 Protein Homology CDS 60788 61525 . - 0 ID=cds-WP_000799924.1;Parent=gene-CCO53_RS18125;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=CCO53_RS18125;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 61528 62067 . - . ID=gene-CCO53_RS18130;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=CCO53_RS18130;old_locus_tag=CCO53_18100 NZ_NPLZ01000011.1 Protein Homology CDS 61528 62067 . - 0 ID=cds-WP_000098573.1;Parent=gene-CCO53_RS18130;Dbxref=GenBank:WP_000098573.1;Name=WP_000098573.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=CCO53_RS18130;product=primosomal protein DnaT;protein_id=WP_000098573.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 62160 62633 . - . ID=gene-CCO53_RS18135;Name=CCO53_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18135;old_locus_tag=CCO53_18105 NZ_NPLZ01000011.1 Protein Homology CDS 62160 62633 . - 0 ID=cds-WP_000511329.1;Parent=gene-CCO53_RS18135;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=CCO53_RS18135;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 62624 63400 . - . ID=gene-CCO53_RS18140;Name=CCO53_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18140;old_locus_tag=CCO53_18110 NZ_NPLZ01000011.1 Protein Homology CDS 62624 63400 . - 0 ID=cds-WP_001747536.1;Parent=gene-CCO53_RS18140;Dbxref=GenBank:WP_001747536.1;Name=WP_001747536.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=CCO53_RS18140;product=threonine/serine ThrE exporter family protein;protein_id=WP_001747536.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 64113 64838 . + . ID=gene-CCO53_RS18145;Name=CCO53_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18145;old_locus_tag=CCO53_18115 NZ_NPLZ01000011.1 Protein Homology CDS 64113 64838 . + 0 ID=cds-WP_000936661.1;Parent=gene-CCO53_RS18145;Dbxref=GenBank:WP_000936661.1;Name=WP_000936661.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=CCO53_RS18145;product=helix-turn-helix transcriptional regulator;protein_id=WP_000936661.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 64799 65473 . + . ID=gene-CCO53_RS18150;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=CCO53_RS18150;old_locus_tag=CCO53_18120 NZ_NPLZ01000011.1 Protein Homology CDS 64799 65473 . + 0 ID=cds-WP_000431546.1;Parent=gene-CCO53_RS18150;Dbxref=GenBank:WP_000431546.1;Name=WP_000431546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=CCO53_RS18150;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 65524 65982 . - . ID=gene-CCO53_RS18155;Name=CCO53_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18155;old_locus_tag=CCO53_18125 NZ_NPLZ01000011.1 Protein Homology CDS 65524 65982 . - 0 ID=cds-WP_000058276.1;Parent=gene-CCO53_RS18155;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=CCO53_RS18155;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 66133 66921 . - . ID=gene-CCO53_RS18160;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=CCO53_RS18160;old_locus_tag=CCO53_18130 NZ_NPLZ01000011.1 Protein Homology CDS 66133 66921 . - 0 ID=cds-WP_023202418.1;Parent=gene-CCO53_RS18160;Dbxref=GenBank:WP_023202418.1;Name=WP_023202418.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=CCO53_RS18160;product=siderophore-iron reductase FhuF;protein_id=WP_023202418.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 67042 68106 . - . ID=gene-CCO53_RS18165;Name=CCO53_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18165;old_locus_tag=CCO53_18135 NZ_NPLZ01000011.1 Protein Homology CDS 67042 68106 . - 0 ID=cds-WP_000211207.1;Parent=gene-CCO53_RS18165;Dbxref=GenBank:WP_000211207.1;Name=WP_000211207.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=CCO53_RS18165;product=GGDEF domain-containing protein;protein_id=WP_000211207.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 68357 68593 . + . ID=gene-CCO53_RS18170;Name=CCO53_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18170;old_locus_tag=CCO53_18140 NZ_NPLZ01000011.1 Protein Homology CDS 68357 68593 . + 0 ID=cds-WP_094887788.1;Parent=gene-CCO53_RS18170;Dbxref=GenBank:WP_094887788.1;Name=WP_094887788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=CCO53_RS18170;product=DUF1435 domain-containing protein;protein_id=WP_094887788.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 68625 68711 . - . ID=gene-CCO53_RS18175;Name=CCO53_RS18175;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS18175;old_locus_tag=CCO53_18145 NZ_NPLZ01000011.1 tRNAscan-SE tRNA 68625 68711 . - . ID=rna-CCO53_RS18175;Parent=gene-CCO53_RS18175;anticodon=(pos:complement(68675..68677));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS18175;product=tRNA-Leu NZ_NPLZ01000011.1 tRNAscan-SE exon 68625 68711 . - . ID=exon-CCO53_RS18175-1;Parent=rna-CCO53_RS18175;anticodon=(pos:complement(68675..68677));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS18175;product=tRNA-Leu NZ_NPLZ01000011.1 RefSeq gene 68743 68829 . - . ID=gene-CCO53_RS18180;Name=CCO53_RS18180;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS18180;old_locus_tag=CCO53_18150 NZ_NPLZ01000011.1 tRNAscan-SE tRNA 68743 68829 . - . ID=rna-CCO53_RS18180;Parent=gene-CCO53_RS18180;anticodon=(pos:complement(68793..68795));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS18180;product=tRNA-Leu NZ_NPLZ01000011.1 tRNAscan-SE exon 68743 68829 . - . ID=exon-CCO53_RS18180-1;Parent=rna-CCO53_RS18180;anticodon=(pos:complement(68793..68795));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS18180;product=tRNA-Leu NZ_NPLZ01000011.1 RefSeq gene 68857 68943 . - . ID=gene-CCO53_RS18185;Name=CCO53_RS18185;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS18185;old_locus_tag=CCO53_18155 NZ_NPLZ01000011.1 tRNAscan-SE tRNA 68857 68943 . - . ID=rna-CCO53_RS18185;Parent=gene-CCO53_RS18185;anticodon=(pos:complement(68907..68909));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS18185;product=tRNA-Leu NZ_NPLZ01000011.1 tRNAscan-SE exon 68857 68943 . - . ID=exon-CCO53_RS18185-1;Parent=rna-CCO53_RS18185;anticodon=(pos:complement(68907..68909));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS18185;product=tRNA-Leu NZ_NPLZ01000011.1 RefSeq gene 69134 70162 . - . ID=gene-CCO53_RS18190;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=CCO53_RS18190;old_locus_tag=CCO53_18160 NZ_NPLZ01000011.1 Protein Homology CDS 69134 70162 . - 0 ID=cds-WP_001534743.1;Parent=gene-CCO53_RS18190;Dbxref=GenBank:WP_001534743.1;Name=WP_001534743.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=CCO53_RS18190;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001534743.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 70265 70702 . + . ID=gene-CCO53_RS18195;Name=CCO53_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18195;old_locus_tag=CCO53_18165 NZ_NPLZ01000011.1 Protein Homology CDS 70265 70702 . + 0 ID=cds-WP_000203996.1;Parent=gene-CCO53_RS18195;Dbxref=GenBank:WP_000203996.1;Name=WP_000203996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=CCO53_RS18195;product=DNA polymerase III subunit psi;protein_id=WP_000203996.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 70647 71093 . + . ID=gene-CCO53_RS18200;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CCO53_RS18200;old_locus_tag=CCO53_18170 NZ_NPLZ01000011.1 Protein Homology CDS 70647 71093 . + 0 ID=cds-WP_001092434.1;Parent=gene-CCO53_RS18200;Dbxref=GenBank:WP_001092434.1;Name=WP_001092434.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=CCO53_RS18200;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092434.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 71115 71792 . + . ID=gene-CCO53_RS18205;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=CCO53_RS18205;old_locus_tag=CCO53_18175 NZ_NPLZ01000011.1 Protein Homology CDS 71115 71792 . + 0 ID=cds-WP_000870686.1;Parent=gene-CCO53_RS18205;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=CCO53_RS18205;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 71884 73473 . + . ID=gene-CCO53_RS18210;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=CCO53_RS18210;old_locus_tag=CCO53_18180 NZ_NPLZ01000011.1 Protein Homology CDS 71884 73473 . + 0 ID=cds-WP_000175965.1;Parent=gene-CCO53_RS18210;Dbxref=GenBank:WP_000175965.1;Name=WP_000175965.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=CCO53_RS18210;product=peptide chain release factor 3;protein_id=WP_000175965.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 73875 74492 . + . ID=gene-CCO53_RS18215;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO53_RS18215;old_locus_tag=CCO53_18185 NZ_NPLZ01000011.1 Protein Homology CDS 73875 74492 . + 0 ID=cds-WP_000178963.1;Parent=gene-CCO53_RS18215;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=CCO53_RS18215;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 74621 74782 . + . ID=gene-CCO53_RS18220;Name=CCO53_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18220;old_locus_tag=CCO53_18190 NZ_NPLZ01000011.1 Protein Homology CDS 74621 74782 . + 0 ID=cds-WP_000490276.1;Parent=gene-CCO53_RS18220;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=CCO53_RS18220;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 74906 75979 . + . ID=gene-CCO53_RS18225;Name=CCO53_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18225;old_locus_tag=CCO53_18195 NZ_NPLZ01000011.1 Protein Homology CDS 74906 75979 . + 0 ID=cds-WP_000531540.1;Parent=gene-CCO53_RS18225;Dbxref=GenBank:WP_000531540.1;Name=WP_000531540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=CCO53_RS18225;product=patatin-like phospholipase family protein;protein_id=WP_000531540.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 75976 76749 . + . ID=gene-CCO53_RS18230;Name=CCO53_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18230;old_locus_tag=CCO53_18200 NZ_NPLZ01000011.1 Protein Homology CDS 75976 76749 . + 0 ID=cds-WP_061372021.1;Parent=gene-CCO53_RS18230;Dbxref=GenBank:WP_061372021.1;Name=WP_061372021.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=CCO53_RS18230;product=metal-dependent hydrolase;protein_id=WP_061372021.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 76782 77645 . - . ID=gene-CCO53_RS18235;Name=CCO53_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18235;old_locus_tag=CCO53_18205 NZ_NPLZ01000011.1 Protein Homology CDS 76782 77645 . - 0 ID=cds-WP_080210122.1;Parent=gene-CCO53_RS18235;Dbxref=GenBank:WP_080210122.1;Name=WP_080210122.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=CCO53_RS18235;product=YjjW family glycine radical enzyme activase;protein_id=WP_080210122.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 77617 79167 . - . ID=gene-CCO53_RS18240;Name=CCO53_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18240;old_locus_tag=CCO53_18210 NZ_NPLZ01000011.1 Protein Homology CDS 77617 79167 . - 0 ID=cds-WP_001111686.1;Parent=gene-CCO53_RS18240;Dbxref=GenBank:WP_001111686.1;Name=WP_001111686.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=CCO53_RS18240;product=YjjI family glycine radical enzyme;protein_id=WP_001111686.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 79427 80206 . + . ID=gene-CCO53_RS18245;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CCO53_RS18245;old_locus_tag=CCO53_18215 NZ_NPLZ01000011.1 Protein Homology CDS 79427 80206 . + 0 ID=cds-WP_001519713.1;Parent=gene-CCO53_RS18245;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=CCO53_RS18245;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 80330 81652 . + . ID=gene-CCO53_RS18250;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=CCO53_RS18250;old_locus_tag=CCO53_18220 NZ_NPLZ01000011.1 Protein Homology CDS 80330 81652 . + 0 ID=cds-WP_000477838.1;Parent=gene-CCO53_RS18250;Dbxref=GenBank:WP_000477838.1;Name=WP_000477838.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=CCO53_RS18250;product=thymidine phosphorylase;protein_id=WP_000477838.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 81704 82927 . + . ID=gene-CCO53_RS18255;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CCO53_RS18255;old_locus_tag=CCO53_18225 NZ_NPLZ01000011.1 Protein Homology CDS 81704 82927 . + 0 ID=cds-WP_000816454.1;Parent=gene-CCO53_RS18255;Dbxref=GenBank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=CCO53_RS18255;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 83040 83759 . + . ID=gene-CCO53_RS18260;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CCO53_RS18260;old_locus_tag=CCO53_18230 NZ_NPLZ01000011.1 Protein Homology CDS 83040 83759 . + 0 ID=cds-WP_000224864.1;Parent=gene-CCO53_RS18260;Dbxref=GenBank:WP_000224864.1;Name=WP_000224864.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=CCO53_RS18260;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 83938 85266 . + . ID=gene-CCO53_RS18265;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=protein_coding;locus_tag=CCO53_RS18265;old_locus_tag=CCO53_18235 NZ_NPLZ01000011.1 Protein Homology CDS 83938 85266 . + 0 ID=cds-WP_001534747.1;Parent=gene-CCO53_RS18265;Dbxref=GenBank:WP_001534747.1;Name=WP_001534747.1;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747246.1;locus_tag=CCO53_RS18265;product=type II toxin-antitoxin system HipA family toxin YjjJ;protein_id=WP_001534747.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 85271 86287 . - . ID=gene-CCO53_RS18270;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=CCO53_RS18270;old_locus_tag=CCO53_18240 NZ_NPLZ01000011.1 Protein Homology CDS 85271 86287 . - 0 ID=cds-WP_000209763.1;Parent=gene-CCO53_RS18270;Dbxref=GenBank:WP_000209763.1;Name=WP_000209763.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=CCO53_RS18270;product=lipoate--protein ligase LplA;protein_id=WP_000209763.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 86321 86965 . - . ID=gene-CCO53_RS18275;Name=CCO53_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18275;old_locus_tag=CCO53_18245 NZ_NPLZ01000011.1 Protein Homology CDS 86321 86965 . - 0 ID=cds-WP_000090067.1;Parent=gene-CCO53_RS18275;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=CCO53_RS18275;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 87082 88050 . + . ID=gene-CCO53_RS18285;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO53_RS18285;old_locus_tag=CCO53_18255 NZ_NPLZ01000011.1 Protein Homology CDS 87082 88050 . + 0 ID=cds-WP_001132982.1;Parent=gene-CCO53_RS18285;Dbxref=GenBank:WP_001132982.1;Name=WP_001132982.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=CCO53_RS18285;product=phosphoserine phosphatase;protein_id=WP_001132982.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 88134 89516 . + . ID=gene-CCO53_RS18290;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CCO53_RS18290;old_locus_tag=CCO53_18260 NZ_NPLZ01000011.1 Protein Homology CDS 88134 89516 . + 0 ID=cds-WP_001029710.1;Parent=gene-CCO53_RS18290;Dbxref=GenBank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=CCO53_RS18290;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq pseudogene 89667 90899 . + . ID=gene-CCO53_RS18295;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=pseudogene;locus_tag=CCO53_RS18295;old_locus_tag=CCO53_18265;pseudo=true NZ_NPLZ01000011.1 Protein Homology CDS 89667 90899 . + 0 ID=cds-CCO53_RS18295;Parent=gene-CCO53_RS18295;Note=internal stop;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=CCO53_RS18295;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;pseudo=true;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 91017 92684 . - . ID=gene-CCO53_RS18300;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=CCO53_RS18300;old_locus_tag=CCO53_18270 NZ_NPLZ01000011.1 Protein Homology CDS 91017 92684 . - 0 ID=cds-WP_000046770.1;Parent=gene-CCO53_RS18300;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=CCO53_RS18300;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 92860 94830 . + . ID=gene-CCO53_RS18310;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=CCO53_RS18310;old_locus_tag=CCO53_18280 NZ_NPLZ01000011.1 Protein Homology CDS 92860 94830 . + 0 ID=cds-WP_155580949.1;Parent=gene-CCO53_RS18310;Dbxref=GenBank:WP_155580949.1;Name=WP_155580949.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=CCO53_RS18310;product=murein transglycosylase;protein_id=WP_155580949.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 94888 95214 . + . ID=gene-CCO53_RS18315;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=CCO53_RS18315;old_locus_tag=CCO53_18285 NZ_NPLZ01000011.1 Protein Homology CDS 94888 95214 . + 0 ID=cds-WP_000192005.1;Parent=gene-CCO53_RS18315;Dbxref=GenBank:WP_000192005.1;Name=WP_000192005.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=CCO53_RS18315;product=trp operon repressor;protein_id=WP_000192005.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 95316 95831 . - . ID=gene-CCO53_RS18320;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=CCO53_RS18320;old_locus_tag=CCO53_18290 NZ_NPLZ01000011.1 Protein Homology CDS 95316 95831 . - 0 ID=cds-WP_000554315.1;Parent=gene-CCO53_RS18320;Dbxref=GenBank:WP_000554315.1;Name=WP_000554315.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=CCO53_RS18320;product=inosine/xanthosine triphosphatase;protein_id=WP_000554315.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 95880 96527 . + . ID=gene-CCO53_RS18325;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=CCO53_RS18325;old_locus_tag=CCO53_18295 NZ_NPLZ01000011.1 Protein Homology CDS 95880 96527 . + 0 ID=cds-WP_000942363.1;Parent=gene-CCO53_RS18325;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=CCO53_RS18325;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 96524 97393 . - . ID=gene-CCO53_RS18330;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=CCO53_RS18330;old_locus_tag=CCO53_18300 NZ_NPLZ01000011.1 Protein Homology CDS 96524 97393 . - 0 ID=cds-WP_000371685.1;Parent=gene-CCO53_RS18330;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=CCO53_RS18330;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 97605 98078 . + . ID=gene-CCO53_RS18335;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=CCO53_RS18335;old_locus_tag=CCO53_18305 NZ_NPLZ01000011.1 Protein Homology CDS 97605 98078 . + 0 ID=cds-WP_000875811.1;Parent=gene-CCO53_RS18335;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=CCO53_RS18335;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 98091 98780 . + . ID=gene-CCO53_RS18340;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=CCO53_RS18340;old_locus_tag=CCO53_18310 NZ_NPLZ01000011.1 Protein Homology CDS 98091 98780 . + 0 ID=cds-WP_001187049.1;Parent=gene-CCO53_RS18340;Dbxref=GenBank:WP_001187049.1;Name=WP_001187049.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=CCO53_RS18340;product=two-component system response regulator CreB;protein_id=WP_001187049.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 98780 100204 . + . ID=gene-CCO53_RS18345;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=CCO53_RS18345;old_locus_tag=CCO53_18315 NZ_NPLZ01000011.1 Protein Homology CDS 98780 100204 . + 0 ID=cds-WP_001219523.1;Parent=gene-CCO53_RS18345;Dbxref=GenBank:WP_001219523.1;Name=WP_001219523.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=CCO53_RS18345;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219523.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 100262 101611 . + . ID=gene-CCO53_RS18350;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=CCO53_RS18350;old_locus_tag=CCO53_18320 NZ_NPLZ01000011.1 Protein Homology CDS 100262 101611 . + 0 ID=cds-WP_000920383.1;Parent=gene-CCO53_RS18350;Dbxref=GenBank:WP_000920383.1;Name=WP_000920383.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=CCO53_RS18350;product=cell envelope integrity protein CreD;protein_id=WP_000920383.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 101669 102754 . - . ID=gene-CCO53_RS18355;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=CCO53_RS18355;old_locus_tag=CCO53_18325 NZ_NPLZ01000011.1 Protein Homology CDS 101669 102754 . - 0 ID=cds-WP_094887780.1;Parent=gene-CCO53_RS18355;Dbxref=GenBank:WP_094887780.1;Name=WP_094887780.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=CCO53_RS18355;product=fimbrial major subunit SthE;protein_id=WP_094887780.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 102795 103352 . - . ID=gene-CCO53_RS18360;Name=CCO53_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18360;old_locus_tag=CCO53_18330 NZ_NPLZ01000011.1 Protein Homology CDS 102795 103352 . - 0 ID=cds-WP_001056989.1;Parent=gene-CCO53_RS18360;Dbxref=GenBank:WP_001056989.1;Name=WP_001056989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=CCO53_RS18360;product=fimbrial protein;protein_id=WP_001056989.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 103370 105907 . - . ID=gene-CCO53_RS18365;Name=CCO53_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18365;old_locus_tag=CCO53_18335 NZ_NPLZ01000011.1 Protein Homology CDS 103370 105907 . - 0 ID=cds-WP_058331394.1;Parent=gene-CCO53_RS18365;Dbxref=GenBank:WP_058331394.1;Name=WP_058331394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=CCO53_RS18365;product=fimbrial outer membrane usher protein;protein_id=WP_058331394.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 105953 106636 . - . ID=gene-CCO53_RS18370;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO53_RS18370;old_locus_tag=CCO53_18340 NZ_NPLZ01000011.1 Protein Homology CDS 105953 106636 . - 0 ID=cds-WP_000680522.1;Parent=gene-CCO53_RS18370;Dbxref=GenBank:WP_000680522.1;Name=WP_000680522.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=CCO53_RS18370;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680522.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 106707 107252 . - . ID=gene-CCO53_RS18375;Name=CCO53_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18375;old_locus_tag=CCO53_18345 NZ_NPLZ01000011.1 Protein Homology CDS 106707 107252 . - 0 ID=cds-WP_001727855.1;Parent=gene-CCO53_RS18375;Dbxref=GenBank:WP_001727855.1;Name=WP_001727855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=CCO53_RS18375;product=fimbrial protein;protein_id=WP_001727855.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 107591 108262 . - . ID=gene-CCO53_RS18380;Name=CCO53_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18380;old_locus_tag=CCO53_18350 NZ_NPLZ01000011.1 Protein Homology CDS 107591 108262 . - 0 ID=cds-WP_080198011.1;Parent=gene-CCO53_RS18380;Dbxref=GenBank:WP_080198011.1;Name=WP_080198011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=CCO53_RS18380;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_080198011.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 108647 108961 . - . ID=gene-CCO53_RS18385;Name=CCO53_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18385;old_locus_tag=CCO53_18355 NZ_NPLZ01000011.1 Protein Homology CDS 108647 108961 . - 0 ID=cds-WP_000749516.1;Parent=gene-CCO53_RS18385;Dbxref=GenBank:WP_000749516.1;Name=WP_000749516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=CCO53_RS18385;product=hypothetical protein;protein_id=WP_000749516.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 109228 109944 . - . ID=gene-CCO53_RS18390;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO53_RS18390;old_locus_tag=CCO53_18360 NZ_NPLZ01000011.1 Protein Homology CDS 109228 109944 . - 0 ID=cds-WP_001194359.1;Parent=gene-CCO53_RS18390;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=CCO53_RS18390;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 110040 110180 . + . ID=gene-CCO53_RS18395;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=CCO53_RS18395;old_locus_tag=CCO53_18365 NZ_NPLZ01000011.1 Protein Homology CDS 110040 110180 . + 0 ID=cds-WP_001541509.1;Parent=gene-CCO53_RS18395;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=CCO53_RS18395;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 110580 111266 . + . ID=gene-CCO53_RS18400;Name=CCO53_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18400;old_locus_tag=CCO53_18370 NZ_NPLZ01000011.1 Protein Homology CDS 110580 111266 . + 0 ID=cds-WP_080198010.1;Parent=gene-CCO53_RS18400;Dbxref=GenBank:WP_080198010.1;Name=WP_080198010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=CCO53_RS18400;product=tRNA/rRNA methyltransferase;protein_id=WP_080198010.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 111480 111545 . + . ID=gene-CCO53_RS18405;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=CCO53_RS18405;old_locus_tag=CCO53_18375 NZ_NPLZ01000011.1 Protein Homology CDS 111480 111545 . + 0 ID=cds-WP_001575544.1;Parent=gene-CCO53_RS18405;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=CCO53_RS18405;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_NPLZ01000011.1 cmsearch sequence_feature 111481 111601 . + . ID=id-NZ_NPLZ01000011.1:111481..111601;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPLZ01000011.1 RefSeq gene 111627 114089 . + . ID=gene-CCO53_RS18410;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=CCO53_RS18410;old_locus_tag=CCO53_18380 NZ_NPLZ01000011.1 Protein Homology CDS 111627 114089 . + 0 ID=cds-WP_001264681.1;Parent=gene-CCO53_RS18410;Dbxref=GenBank:WP_001264681.1;Name=WP_001264681.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=CCO53_RS18410;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264681.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 114091 115020 . + . ID=gene-CCO53_RS18415;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CCO53_RS18415;old_locus_tag=CCO53_18385 NZ_NPLZ01000011.1 Protein Homology CDS 114091 115020 . + 0 ID=cds-WP_000241685.1;Parent=gene-CCO53_RS18415;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=CCO53_RS18415;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 115024 116310 . + . ID=gene-CCO53_RS18420;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CCO53_RS18420;old_locus_tag=CCO53_18390 NZ_NPLZ01000011.1 Protein Homology CDS 115024 116310 . + 0 ID=cds-WP_058331392.1;Parent=gene-CCO53_RS18420;Dbxref=GenBank:WP_058331392.1;Name=WP_058331392.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=CCO53_RS18420;product=threonine synthase;protein_id=WP_058331392.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 116404 117177 . - . ID=gene-CCO53_RS18425;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=CCO53_RS18425;old_locus_tag=CCO53_18395 NZ_NPLZ01000011.1 Protein Homology CDS 116404 117177 . - 0 ID=cds-WP_000906175.1;Parent=gene-CCO53_RS18425;Dbxref=GenBank:WP_000906175.1;Name=WP_000906175.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=CCO53_RS18425;product=peroxide stress protein YaaA;protein_id=WP_000906175.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 117256 118686 . - . ID=gene-CCO53_RS18430;Name=CCO53_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18430;old_locus_tag=CCO53_18400 NZ_NPLZ01000011.1 Protein Homology CDS 117256 118686 . - 0 ID=cds-WP_080160459.1;Parent=gene-CCO53_RS18430;Dbxref=GenBank:WP_080160459.1;Name=WP_080160459.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=CCO53_RS18430;product=alanine/glycine:cation symporter family protein;protein_id=WP_080160459.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 118955 119908 . + . ID=gene-CCO53_RS18435;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO53_RS18435;old_locus_tag=CCO53_18405 NZ_NPLZ01000011.1 Protein Homology CDS 118955 119908 . + 0 ID=cds-WP_000130175.1;Parent=gene-CCO53_RS18435;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=CCO53_RS18435;product=transaldolase;protein_id=WP_000130175.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 120019 120609 . + . ID=gene-CCO53_RS18440;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=CCO53_RS18440;old_locus_tag=CCO53_18410 NZ_NPLZ01000011.1 Protein Homology CDS 120019 120609 . + 0 ID=cds-WP_000380373.1;Parent=gene-CCO53_RS18440;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=CCO53_RS18440;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 120666 121232 . - . ID=gene-CCO53_RS18445;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=CCO53_RS18445;old_locus_tag=CCO53_18415 NZ_NPLZ01000011.1 Protein Homology CDS 120666 121232 . - 0 ID=cds-WP_000528525.1;Parent=gene-CCO53_RS18445;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=CCO53_RS18445;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 121382 122095 . - . ID=gene-CCO53_RS18450;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=CCO53_RS18450;old_locus_tag=CCO53_18420 NZ_NPLZ01000011.1 Protein Homology CDS 121382 122095 . - 0 ID=cds-WP_001103477.1;Parent=gene-CCO53_RS18450;Dbxref=GenBank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=CCO53_RS18450;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 122131 122535 . - . ID=gene-CCO53_RS18455;Name=CCO53_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18455;old_locus_tag=CCO53_18425 NZ_NPLZ01000011.1 Protein Homology CDS 122131 122535 . - 0 ID=cds-WP_058331391.1;Parent=gene-CCO53_RS18455;Dbxref=GenBank:WP_058331391.1;Name=WP_058331391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=CCO53_RS18455;product=DUF2541 family protein;protein_id=WP_058331391.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 122884 124800 . + . ID=gene-CCO53_RS18460;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CCO53_RS18460;old_locus_tag=CCO53_18430 NZ_NPLZ01000011.1 Protein Homology CDS 122884 124800 . + 0 ID=cds-WP_000516126.1;Parent=gene-CCO53_RS18460;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=CCO53_RS18460;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 124886 126025 . + . ID=gene-CCO53_RS18465;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CCO53_RS18465;old_locus_tag=CCO53_18435 NZ_NPLZ01000011.1 Protein Homology CDS 124886 126025 . + 0 ID=cds-WP_001119009.1;Parent=gene-CCO53_RS18465;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=CCO53_RS18465;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 126306 127253 . + . ID=gene-CCO53_RS18470;Name=CCO53_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18470;old_locus_tag=CCO53_18440 NZ_NPLZ01000011.1 Protein Homology CDS 126306 127253 . + 0 ID=cds-WP_000534911.1;Parent=gene-CCO53_RS18470;Dbxref=GenBank:WP_000534911.1;Name=WP_000534911.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=CCO53_RS18470;product=LysR family transcriptional regulator;protein_id=WP_000534911.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 127380 127724 . + . ID=gene-CCO53_RS18475;Name=CCO53_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18475;old_locus_tag=CCO53_18445 NZ_NPLZ01000011.1 Protein Homology CDS 127380 127724 . + 0 ID=cds-WP_000026889.1;Parent=gene-CCO53_RS18475;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=CCO53_RS18475;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 127785 128318 . - . ID=gene-CCO53_RS18480;Name=CCO53_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18480;old_locus_tag=CCO53_18450 NZ_NPLZ01000011.1 Protein Homology CDS 127785 128318 . - 0 ID=cds-WP_001068132.1;Parent=gene-CCO53_RS18480;Dbxref=GenBank:WP_001068132.1;Name=WP_001068132.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=CCO53_RS18480;product=glycoside hydrolase family 108 protein;protein_id=WP_001068132.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 128335 128778 . - . ID=gene-CCO53_RS18485;Name=CCO53_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18485;old_locus_tag=CCO53_18455 NZ_NPLZ01000011.1 Protein Homology CDS 128335 128778 . - 0 ID=cds-WP_000860681.1;Parent=gene-CCO53_RS18485;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=CCO53_RS18485;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 129159 131270 . + . ID=gene-CCO53_RS18490;Name=CCO53_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18490;old_locus_tag=CCO53_18460 NZ_NPLZ01000011.1 Protein Homology CDS 129159 131270 . + 0 ID=cds-WP_000235806.1;Parent=gene-CCO53_RS18490;Dbxref=GenBank:WP_000235806.1;Name=WP_000235806.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=CCO53_RS18490;product=glycosyl hydrolase family 18 protein;protein_id=WP_000235806.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 131363 134359 . + . ID=gene-CCO53_RS18495;Name=CCO53_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18495;old_locus_tag=CCO53_18465 NZ_NPLZ01000011.1 Protein Homology CDS 131363 134359 . + 0 ID=cds-WP_094887781.1;Parent=gene-CCO53_RS18495;Dbxref=GenBank:WP_094887781.1;Name=WP_094887781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=CCO53_RS18495;product=chitinase;protein_id=WP_094887781.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 134640 135344 . + . ID=gene-CCO53_RS18500;Name=CCO53_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18500;old_locus_tag=CCO53_18470 NZ_NPLZ01000011.1 Protein Homology CDS 134640 135344 . + 0 ID=cds-WP_000738619.1;Parent=gene-CCO53_RS18500;Dbxref=GenBank:WP_000738619.1;Name=WP_000738619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=CCO53_RS18500;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000738619.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 135774 136316 . + . ID=gene-CCO53_RS18505;Name=CCO53_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18505;old_locus_tag=CCO53_18475 NZ_NPLZ01000011.1 Protein Homology CDS 135774 136316 . + 0 ID=cds-WP_000743357.1;Parent=gene-CCO53_RS18505;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=CCO53_RS18505;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 136417 137103 . + . ID=gene-CCO53_RS18510;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=CCO53_RS18510;old_locus_tag=CCO53_18480 NZ_NPLZ01000011.1 Protein Homology CDS 136417 137103 . + 0 ID=cds-WP_000742551.1;Parent=gene-CCO53_RS18510;Dbxref=GenBank:WP_000742551.1;Name=WP_000742551.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=CCO53_RS18510;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000742551.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 137108 139729 . + . ID=gene-CCO53_RS18515;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=CCO53_RS18515;old_locus_tag=CCO53_18485 NZ_NPLZ01000011.1 Protein Homology CDS 137108 139729 . + 0 ID=cds-WP_094887782.1;Parent=gene-CCO53_RS18515;Dbxref=GenBank:WP_094887782.1;Name=WP_094887782.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=CCO53_RS18515;product=fimbrial usher BcfC;protein_id=WP_094887782.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 139730 140737 . + . ID=gene-CCO53_RS18520;Name=CCO53_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18520;old_locus_tag=CCO53_18490 NZ_NPLZ01000011.1 Protein Homology CDS 139730 140737 . + 0 ID=cds-WP_000701250.1;Parent=gene-CCO53_RS18520;Dbxref=GenBank:WP_000701250.1;Name=WP_000701250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=CCO53_RS18520;product=fimbrial protein BcfD;protein_id=WP_000701250.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 140738 141283 . + . ID=gene-CCO53_RS18525;Name=CCO53_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18525;old_locus_tag=CCO53_18495 NZ_NPLZ01000011.1 Protein Homology CDS 140738 141283 . + 0 ID=cds-WP_001082038.1;Parent=gene-CCO53_RS18525;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=CCO53_RS18525;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 141299 141817 . + . ID=gene-CCO53_RS18530;Name=CCO53_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18530;old_locus_tag=CCO53_18500 NZ_NPLZ01000011.1 Protein Homology CDS 141299 141817 . + 0 ID=cds-WP_001243233.1;Parent=gene-CCO53_RS18530;Dbxref=GenBank:WP_001243233.1;Name=WP_001243233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=CCO53_RS18530;product=fimbrial protein BcfF;protein_id=WP_001243233.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 141783 142514 . + . ID=gene-CCO53_RS18535;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=CCO53_RS18535;old_locus_tag=CCO53_18505 NZ_NPLZ01000011.1 Protein Homology CDS 141783 142514 . + 0 ID=cds-WP_001135035.1;Parent=gene-CCO53_RS18535;Dbxref=GenBank:WP_001135035.1;Name=WP_001135035.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=CCO53_RS18535;product=fimbrial chaperone BcfG;protein_id=WP_001135035.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 142579 143424 . + . ID=gene-CCO53_RS18540;Name=CCO53_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18540;old_locus_tag=CCO53_18510 NZ_NPLZ01000011.1 Protein Homology CDS 142579 143424 . + 0 ID=cds-WP_000291393.1;Parent=gene-CCO53_RS18540;Dbxref=GenBank:WP_000291393.1;Name=WP_000291393.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=CCO53_RS18540;product=DsbA family protein;protein_id=WP_000291393.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 143463 143750 . + . ID=gene-CCO53_RS18545;Name=CCO53_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18545;old_locus_tag=CCO53_18515 NZ_NPLZ01000011.1 Protein Homology CDS 143463 143750 . + 0 ID=cds-WP_000839831.1;Parent=gene-CCO53_RS18545;Dbxref=GenBank:WP_000839831.1;Name=WP_000839831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=CCO53_RS18545;product=hypothetical protein;protein_id=WP_000839831.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 143850 144299 . - . ID=gene-CCO53_RS18550;Name=CCO53_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18550;old_locus_tag=CCO53_18520 NZ_NPLZ01000011.1 Protein Homology CDS 143850 144299 . - 0 ID=cds-WP_001250361.1;Parent=gene-CCO53_RS18550;Dbxref=GenBank:WP_001250361.1;Name=WP_001250361.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=CCO53_RS18550;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001250361.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 144669 145673 . + . ID=gene-CCO53_RS18555;Name=CCO53_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18555;old_locus_tag=CCO53_18525 NZ_NPLZ01000011.1 Protein Homology CDS 144669 145673 . + 0 ID=cds-WP_001247388.1;Parent=gene-CCO53_RS18555;Dbxref=GenBank:WP_001247388.1;Name=WP_001247388.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=CCO53_RS18555;product=LysR family transcriptional regulator;protein_id=WP_001247388.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 145681 146118 . - . ID=gene-CCO53_RS18560;Name=CCO53_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18560;old_locus_tag=CCO53_18530 NZ_NPLZ01000011.1 Protein Homology CDS 145681 146118 . - 0 ID=cds-WP_000158341.1;Parent=gene-CCO53_RS18560;Dbxref=GenBank:WP_000158341.1;Name=WP_000158341.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=CCO53_RS18560;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000158341.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 146641 148359 . + . ID=gene-CCO53_RS18565;Name=CCO53_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18565;old_locus_tag=CCO53_18535 NZ_NPLZ01000011.1 Protein Homology CDS 146641 148359 . + 0 ID=cds-WP_001036509.1;Parent=gene-CCO53_RS18565;Dbxref=GenBank:WP_001036509.1;Name=WP_001036509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=CCO53_RS18565;product=aryl-sulfate sulfotransferase;protein_id=WP_001036509.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 148405 149976 . - . ID=gene-CCO53_RS18570;Name=CCO53_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18570;old_locus_tag=CCO53_18540 NZ_NPLZ01000011.1 Protein Homology CDS 148405 149976 . - 0 ID=cds-WP_000262866.1;Parent=gene-CCO53_RS18570;Dbxref=GenBank:WP_000262866.1;Name=WP_000262866.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=CCO53_RS18570;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000262866.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 150075 150836 . - . ID=gene-CCO53_RS18575;Name=CCO53_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18575;old_locus_tag=CCO53_18545 NZ_NPLZ01000011.1 Protein Homology CDS 150075 150836 . - 0 ID=cds-WP_000791534.1;Parent=gene-CCO53_RS18575;Dbxref=GenBank:WP_000791534.1;Name=WP_000791534.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=CCO53_RS18575;product=outer membrane protein OmpK;protein_id=WP_000791534.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 151431 152924 . + . ID=gene-CCO53_RS18580;Name=CCO53_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18580;old_locus_tag=CCO53_18550 NZ_NPLZ01000011.1 Protein Homology CDS 151431 152924 . + 0 ID=cds-WP_094887783.1;Parent=gene-CCO53_RS18580;Dbxref=GenBank:WP_094887783.1;Name=WP_094887783.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=CCO53_RS18580;product=sulfatase family protein;protein_id=WP_094887783.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 153023 154213 . + . ID=gene-CCO53_RS18585;Name=CCO53_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18585;old_locus_tag=CCO53_18555 NZ_NPLZ01000011.1 Protein Homology CDS 153023 154213 . + 0 ID=cds-WP_000971150.1;Parent=gene-CCO53_RS18585;Dbxref=GenBank:WP_000971150.1;Name=WP_000971150.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=CCO53_RS18585;product=anaerobic sulfatase maturase;protein_id=WP_000971150.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 154232 155485 . + . ID=gene-CCO53_RS18590;Name=CCO53_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18590;old_locus_tag=CCO53_18560 NZ_NPLZ01000011.1 Protein Homology CDS 154232 155485 . + 0 ID=cds-WP_001055834.1;Parent=gene-CCO53_RS18590;Dbxref=GenBank:WP_001055834.1;Name=WP_001055834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=CCO53_RS18590;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_001055834.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 155612 157327 . + . ID=gene-CCO53_RS18595;Name=CCO53_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18595;old_locus_tag=CCO53_18565 NZ_NPLZ01000011.1 Protein Homology CDS 155612 157327 . + 0 ID=cds-WP_001094797.1;Parent=gene-CCO53_RS18595;Dbxref=GenBank:WP_001094797.1;Name=WP_001094797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=CCO53_RS18595;product=aryl-sulfate sulfotransferase;protein_id=WP_001094797.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 157490 158656 . + . ID=gene-CCO53_RS18600;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CCO53_RS18600;old_locus_tag=CCO53_18570 NZ_NPLZ01000011.1 Protein Homology CDS 157490 158656 . + 0 ID=cds-WP_000681340.1;Parent=gene-CCO53_RS18600;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=CCO53_RS18600;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 158718 159617 . + . ID=gene-CCO53_RS18605;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=CCO53_RS18605;old_locus_tag=CCO53_18575 NZ_NPLZ01000011.1 Protein Homology CDS 158718 159617 . + 0 ID=cds-WP_000062872.1;Parent=gene-CCO53_RS18605;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=CCO53_RS18605;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 159672 161711 . - . ID=gene-CCO53_RS18610;Name=CCO53_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18610;old_locus_tag=CCO53_18580 NZ_NPLZ01000011.1 Protein Homology CDS 159672 161711 . - 0 ID=cds-WP_023202431.1;Parent=gene-CCO53_RS18610;Dbxref=GenBank:WP_023202431.1;Name=WP_023202431.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=CCO53_RS18610;product=glycoside hydrolase family 31 protein;protein_id=WP_023202431.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 161751 163124 . - . ID=gene-CCO53_RS18615;Name=CCO53_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18615;old_locus_tag=CCO53_18585 NZ_NPLZ01000011.1 Protein Homology CDS 161751 163124 . - 0 ID=cds-WP_088759171.1;Parent=gene-CCO53_RS18615;Dbxref=GenBank:WP_088759171.1;Name=WP_088759171.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=CCO53_RS18615;product=MFS transporter;protein_id=WP_088759171.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 163580 163843 . - . ID=gene-CCO53_RS18620;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CCO53_RS18620;old_locus_tag=CCO53_18590 NZ_NPLZ01000011.1 Protein Homology CDS 163580 163843 . - 0 ID=cds-WP_001518655.1;Parent=gene-CCO53_RS18620;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=CCO53_RS18620;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 163949 164164 . + . ID=gene-CCO53_RS18625;Name=CCO53_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18625;old_locus_tag=CCO53_18595 NZ_NPLZ01000011.1 Protein Homology CDS 163949 164164 . + 0 ID=cds-WP_001726890.1;Parent=gene-CCO53_RS18625;Dbxref=GenBank:WP_001726890.1;Name=WP_001726890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=CCO53_RS18625;product=DUF2575 family protein;protein_id=WP_001726890.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 164172 165110 . + . ID=gene-CCO53_RS18630;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=CCO53_RS18630;old_locus_tag=CCO53_18600 NZ_NPLZ01000011.1 Protein Homology CDS 164172 165110 . + 0 ID=cds-WP_000767311.1;Parent=gene-CCO53_RS18630;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=CCO53_RS18630;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 165155 167989 . + . ID=gene-CCO53_RS18635;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CCO53_RS18635;old_locus_tag=CCO53_18605 NZ_NPLZ01000011.1 Protein Homology CDS 165155 167989 . + 0 ID=cds-WP_024134200.1;Parent=gene-CCO53_RS18635;Dbxref=GenBank:WP_024134200.1;Name=WP_024134200.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=CCO53_RS18635;product=isoleucine--tRNA ligase;protein_id=WP_024134200.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 167989 168489 . + . ID=gene-CCO53_RS18640;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CCO53_RS18640;old_locus_tag=CCO53_18610 NZ_NPLZ01000011.1 Protein Homology CDS 167989 168489 . + 0 ID=cds-WP_000042736.1;Parent=gene-CCO53_RS18640;Dbxref=GenBank:WP_000042736.1;Name=WP_000042736.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=CCO53_RS18640;product=signal peptidase II;protein_id=WP_000042736.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 168644 169093 . + . ID=gene-CCO53_RS18645;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=CCO53_RS18645;old_locus_tag=CCO53_18615 NZ_NPLZ01000011.1 Protein Homology CDS 168644 169093 . + 0 ID=cds-WP_000047269.1;Parent=gene-CCO53_RS18645;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=CCO53_RS18645;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 169096 170046 . + . ID=gene-CCO53_RS18650;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=CCO53_RS18650;old_locus_tag=CCO53_18620 NZ_NPLZ01000011.1 Protein Homology CDS 169096 170046 . + 0 ID=cds-WP_001166428.1;Parent=gene-CCO53_RS18650;Dbxref=GenBank:WP_001166428.1;Name=WP_001166428.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=CCO53_RS18650;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166428.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 170246 171448 . + . ID=gene-CCO53_RS18655;Name=CCO53_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18655;old_locus_tag=CCO53_18625 NZ_NPLZ01000011.1 Protein Homology CDS 170246 171448 . + 0 ID=cds-WP_000516315.1;Parent=gene-CCO53_RS18655;Dbxref=GenBank:WP_000516315.1;Name=WP_000516315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=CCO53_RS18655;product=XAC2610-related protein;protein_id=WP_000516315.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 171464 172384 . + . ID=gene-CCO53_RS18660;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CCO53_RS18660;old_locus_tag=CCO53_18630 NZ_NPLZ01000011.1 Protein Homology CDS 171464 172384 . + 0 ID=cds-WP_058331386.1;Parent=gene-CCO53_RS18660;Dbxref=GenBank:WP_058331386.1;Name=WP_058331386.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=CCO53_RS18660;product=ribonucleoside hydrolase RihC;protein_id=WP_058331386.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 172406 173092 . - . ID=gene-CCO53_RS18665;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=CCO53_RS18665;old_locus_tag=CCO53_18635 NZ_NPLZ01000011.1 Protein Homology CDS 172406 173092 . - 0 ID=cds-WP_000377415.1;Parent=gene-CCO53_RS18665;Dbxref=GenBank:WP_000377415.1;Name=WP_000377415.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=CCO53_RS18665;product=citrate response regulator transcription factor CitB;protein_id=WP_000377415.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 173094 174713 . - . ID=gene-CCO53_RS18670;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=CCO53_RS18670;old_locus_tag=CCO53_18640 NZ_NPLZ01000011.1 Protein Homology CDS 173094 174713 . - 0 ID=cds-WP_058331442.1;Parent=gene-CCO53_RS18670;Dbxref=GenBank:WP_058331442.1;Name=WP_058331442.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=CCO53_RS18670;product=citrate sensor histidine kinase CitA;protein_id=WP_058331442.1;transl_table=11 NZ_NPLZ01000011.1 RefSeq gene 174848 175791 . - . ID=gene-CCO53_RS18675;Name=CCO53_RS18675;end_range=175791,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18675;old_locus_tag=CCO53_18645;partial=true NZ_NPLZ01000011.1 Protein Homology CDS 174848 175791 . - 2 ID=cds-WP_094887784.1;Parent=gene-CCO53_RS18675;Dbxref=GenBank:WP_094887784.1;Name=WP_094887784.1;Ontology_term=GO:0006814,GO:0016829;end_range=175791,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459747.1;locus_tag=CCO53_RS18675;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_094887784.1;transl_table=11 ##sequence-region NZ_NPLZ01000012.1 1 165014 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000012.1 RefSeq region 1 165014 . + . ID=NZ_NPLZ01000012.1:1..165014;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000012.1 RefSeq gene 1 547 . + . ID=gene-CCO53_RS18680;Name=CCO53_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18680;old_locus_tag=CCO53_18650;partial=true;start_range=.,1 NZ_NPLZ01000012.1 Protein Homology CDS 1 547 . + 1 ID=cds-WP_140428408.1;Parent=gene-CCO53_RS18680;Dbxref=GenBank:WP_140428408.1;Name=WP_140428408.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459747.1;locus_tag=CCO53_RS18680;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_140428408.1;start_range=.,1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 666 1364 . + . ID=gene-CCO53_RS18685;Name=CCO53_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18685;old_locus_tag=CCO53_18655 NZ_NPLZ01000012.1 Protein Homology CDS 666 1364 . + 0 ID=cds-WP_017441912.1;Parent=gene-CCO53_RS18685;Dbxref=GenBank:WP_017441912.1;Name=WP_017441912.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=CCO53_RS18685;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_017441912.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 1743 2822 . + . ID=gene-CCO53_RS18690;Name=CCO53_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18690;old_locus_tag=CCO53_18660 NZ_NPLZ01000012.1 Protein Homology CDS 1743 2822 . + 0 ID=cds-WP_000128327.1;Parent=gene-CCO53_RS18690;Dbxref=GenBank:WP_000128327.1;Name=WP_000128327.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=CCO53_RS18690;product=FecCD family ABC transporter permease;protein_id=WP_000128327.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 2822 3598 . + . ID=gene-CCO53_RS18695;Name=CCO53_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18695;old_locus_tag=CCO53_18665 NZ_NPLZ01000012.1 Protein Homology CDS 2822 3598 . + 0 ID=cds-WP_080095446.1;Parent=gene-CCO53_RS18695;Dbxref=GenBank:WP_080095446.1;Name=WP_080095446.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=CCO53_RS18695;product=ABC transporter ATP-binding protein;protein_id=WP_080095446.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 3689 4441 . - . ID=gene-CCO53_RS18700;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=CCO53_RS18700;old_locus_tag=CCO53_18670 NZ_NPLZ01000012.1 Protein Homology CDS 3689 4441 . - 0 ID=cds-WP_000301554.1;Parent=gene-CCO53_RS18700;Dbxref=GenBank:WP_000301554.1;Name=WP_000301554.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=CCO53_RS18700;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301554.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 4665 5705 . - . ID=gene-CCO53_RS18710;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=CCO53_RS18710;old_locus_tag=CCO53_18680 NZ_NPLZ01000012.1 Protein Homology CDS 4665 5705 . - 0 ID=cds-WP_000931429.1;Parent=gene-CCO53_RS18710;Dbxref=GenBank:WP_000931429.1;Name=WP_000931429.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=CCO53_RS18710;product=galactose-1-epimerase;protein_id=WP_000931429.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 5699 6847 . - . ID=gene-CCO53_RS18715;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CCO53_RS18715;old_locus_tag=CCO53_18685 NZ_NPLZ01000012.1 Protein Homology CDS 5699 6847 . - 0 ID=cds-WP_001049367.1;Parent=gene-CCO53_RS18715;Dbxref=GenBank:WP_001049367.1;Name=WP_001049367.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=CCO53_RS18715;product=galactokinase;protein_id=WP_001049367.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 6850 7896 . - . ID=gene-CCO53_RS18720;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CCO53_RS18720;old_locus_tag=CCO53_18690 NZ_NPLZ01000012.1 Protein Homology CDS 6850 7896 . - 0 ID=cds-WP_000187473.1;Parent=gene-CCO53_RS18720;Dbxref=GenBank:WP_000187473.1;Name=WP_000187473.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=CCO53_RS18720;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187473.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 7907 8923 . - . ID=gene-CCO53_RS18725;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CCO53_RS18725;old_locus_tag=CCO53_18695 NZ_NPLZ01000012.1 Protein Homology CDS 7907 8923 . - 0 ID=cds-WP_001265463.1;Parent=gene-CCO53_RS18725;Dbxref=GenBank:WP_001265463.1;Name=WP_001265463.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=CCO53_RS18725;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265463.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 9146 10054 . - . ID=gene-CCO53_RS18730;Name=CCO53_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18730;old_locus_tag=CCO53_18700 NZ_NPLZ01000012.1 Protein Homology CDS 9146 10054 . - 0 ID=cds-WP_000885519.1;Parent=gene-CCO53_RS18730;Dbxref=GenBank:WP_000885519.1;Name=WP_000885519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=CCO53_RS18730;product=DUF2167 domain-containing protein;protein_id=WP_000885519.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 10225 11700 . - . ID=gene-CCO53_RS18735;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=CCO53_RS18735;old_locus_tag=CCO53_18705 NZ_NPLZ01000012.1 Protein Homology CDS 10225 11700 . - 0 ID=cds-WP_023201465.1;Parent=gene-CCO53_RS18735;Dbxref=GenBank:WP_023201465.1;Name=WP_023201465.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=CCO53_RS18735;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_023201465.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 11768 12556 . - . ID=gene-CCO53_RS18745;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=CCO53_RS18745;old_locus_tag=CCO53_18715 NZ_NPLZ01000012.1 Protein Homology CDS 11768 12556 . - 0 ID=cds-WP_001147416.1;Parent=gene-CCO53_RS18745;Dbxref=GenBank:WP_001147416.1;Name=WP_001147416.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=CCO53_RS18745;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147416.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 12685 12834 . + . ID=gene-CCO53_RS18750;Name=CCO53_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18750;old_locus_tag=CCO53_18720 NZ_NPLZ01000012.1 Protein Homology CDS 12685 12834 . + 0 ID=cds-WP_000891513.1;Parent=gene-CCO53_RS18750;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=CCO53_RS18750;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 13001 13774 . + . ID=gene-CCO53_RS18755;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CCO53_RS18755;old_locus_tag=CCO53_18725 NZ_NPLZ01000012.1 Protein Homology CDS 13001 13774 . + 0 ID=cds-WP_000951407.1;Parent=gene-CCO53_RS18755;Dbxref=GenBank:WP_000951407.1;Name=WP_000951407.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=CCO53_RS18755;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951407.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 13774 14463 . + . ID=gene-CCO53_RS18760;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CCO53_RS18760;old_locus_tag=CCO53_18730 NZ_NPLZ01000012.1 Protein Homology CDS 13774 14463 . + 0 ID=cds-WP_000604026.1;Parent=gene-CCO53_RS18760;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=CCO53_RS18760;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 14466 15524 . + . ID=gene-CCO53_RS18765;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=CCO53_RS18765;old_locus_tag=CCO53_18735 NZ_NPLZ01000012.1 Protein Homology CDS 14466 15524 . + 0 ID=cds-WP_000891715.1;Parent=gene-CCO53_RS18765;Dbxref=GenBank:WP_000891715.1;Name=WP_000891715.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=CCO53_RS18765;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891715.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 15525 16343 . - . ID=gene-CCO53_RS18770;Name=CCO53_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18770;old_locus_tag=CCO53_18740 NZ_NPLZ01000012.1 Protein Homology CDS 15525 16343 . - 0 ID=cds-WP_001748281.1;Parent=gene-CCO53_RS18770;Dbxref=GenBank:WP_001748281.1;Name=WP_001748281.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=CCO53_RS18770;product=pyridoxal phosphatase;protein_id=WP_001748281.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 16507 17502 . + . ID=gene-CCO53_RS18775;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=CCO53_RS18775;old_locus_tag=CCO53_18745 NZ_NPLZ01000012.1 Protein Homology CDS 16507 17502 . + 0 ID=cds-WP_094887789.1;Parent=gene-CCO53_RS18775;Dbxref=GenBank:WP_094887789.1;Name=WP_094887789.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=CCO53_RS18775;product=6-phosphogluconolactonase;protein_id=WP_094887789.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 17615 18547 . - . ID=gene-CCO53_RS18780;Name=CCO53_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18780;old_locus_tag=CCO53_18750 NZ_NPLZ01000012.1 Protein Homology CDS 17615 18547 . - 0 ID=cds-WP_015632852.1;Parent=gene-CCO53_RS18780;Dbxref=GenBank:WP_015632852.1;Name=WP_015632852.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632852.1;locus_tag=CCO53_RS18780;product=LysR family transcriptional regulator;protein_id=WP_015632852.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 18746 19801 . + . ID=gene-CCO53_RS18785;Name=CCO53_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18785;old_locus_tag=CCO53_18755 NZ_NPLZ01000012.1 Protein Homology CDS 18746 19801 . + 0 ID=cds-WP_094887790.1;Parent=gene-CCO53_RS18785;Dbxref=GenBank:WP_094887790.1;Name=WP_094887790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723616.1;locus_tag=CCO53_RS18785;product=4-oxalomesaconate tautomerase;protein_id=WP_094887790.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 19884 21317 . + . ID=gene-CCO53_RS18790;Name=CCO53_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18790;old_locus_tag=CCO53_18760 NZ_NPLZ01000012.1 Protein Homology CDS 19884 21317 . + 0 ID=cds-WP_001534237.1;Parent=gene-CCO53_RS18790;Dbxref=GenBank:WP_001534237.1;Name=WP_001534237.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=CCO53_RS18790;product=anion permease;protein_id=WP_001534237.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 21420 23678 . + . ID=gene-CCO53_RS18795;Name=CCO53_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18795;old_locus_tag=CCO53_18765 NZ_NPLZ01000012.1 Protein Homology CDS 21420 23678 . + 0 ID=cds-WP_000258265.1;Parent=gene-CCO53_RS18795;Dbxref=GenBank:WP_000258265.1;Name=WP_000258265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258265.1;locus_tag=CCO53_RS18795;product=hydratase;protein_id=WP_000258265.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 23739 25022 . - . ID=gene-CCO53_RS18800;Name=CCO53_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18800;old_locus_tag=CCO53_18770 NZ_NPLZ01000012.1 Protein Homology CDS 23739 25022 . - 0 ID=cds-WP_001094776.1;Parent=gene-CCO53_RS18800;Dbxref=GenBank:WP_001094776.1;Name=WP_001094776.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=CCO53_RS18800;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094776.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 25260 26483 . + . ID=gene-CCO53_RS18805;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CCO53_RS18805;old_locus_tag=CCO53_18775 NZ_NPLZ01000012.1 Protein Homology CDS 25260 26483 . + 0 ID=cds-WP_001249483.1;Parent=gene-CCO53_RS18805;Dbxref=GenBank:WP_001249483.1;Name=WP_001249483.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=CCO53_RS18805;product=imidazolonepropionase;protein_id=WP_001249483.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 26480 27421 . + . ID=gene-CCO53_RS18810;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CCO53_RS18810;old_locus_tag=CCO53_18780 NZ_NPLZ01000012.1 Protein Homology CDS 26480 27421 . + 0 ID=cds-WP_000195688.1;Parent=gene-CCO53_RS18810;Dbxref=GenBank:WP_000195688.1;Name=WP_000195688.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=CCO53_RS18810;product=formimidoylglutamase;protein_id=WP_000195688.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 27466 28191 . + . ID=gene-CCO53_RS18815;Name=CCO53_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18815;old_locus_tag=CCO53_18785 NZ_NPLZ01000012.1 Protein Homology CDS 27466 28191 . + 0 ID=cds-WP_094887791.1;Parent=gene-CCO53_RS18815;Dbxref=GenBank:WP_094887791.1;Name=WP_094887791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=CCO53_RS18815;product=histidine utilization repressor;protein_id=WP_094887791.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 28388 30073 . + . ID=gene-CCO53_RS18820;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CCO53_RS18820;old_locus_tag=CCO53_18790 NZ_NPLZ01000012.1 Protein Homology CDS 28388 30073 . + 0 ID=cds-WP_058332014.1;Parent=gene-CCO53_RS18820;Dbxref=GenBank:WP_058332014.1;Name=WP_058332014.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=CCO53_RS18820;product=urocanate hydratase;protein_id=WP_058332014.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 30075 31595 . + . ID=gene-CCO53_RS18825;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CCO53_RS18825;old_locus_tag=CCO53_18795 NZ_NPLZ01000012.1 Protein Homology CDS 30075 31595 . + 0 ID=cds-WP_001095227.1;Parent=gene-CCO53_RS18825;Dbxref=GenBank:WP_001095227.1;Name=WP_001095227.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=CCO53_RS18825;product=histidine ammonia-lyase;protein_id=WP_001095227.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 31680 32156 . - . ID=gene-CCO53_RS18830;Name=CCO53_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18830;old_locus_tag=CCO53_18800 NZ_NPLZ01000012.1 Protein Homology CDS 31680 32156 . - 0 ID=cds-WP_000767404.1;Parent=gene-CCO53_RS18830;Dbxref=GenBank:WP_000767404.1;Name=WP_000767404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=CCO53_RS18830;product=kinase inhibitor;protein_id=WP_000767404.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 32214 33503 . - . ID=gene-CCO53_RS18835;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CCO53_RS18835;old_locus_tag=CCO53_18805 NZ_NPLZ01000012.1 Protein Homology CDS 32214 33503 . - 0 ID=cds-WP_080160271.1;Parent=gene-CCO53_RS18835;Dbxref=GenBank:WP_080160271.1;Name=WP_080160271.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=CCO53_RS18835;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_080160271.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 33590 34630 . + . ID=gene-CCO53_RS18840;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CCO53_RS18840;old_locus_tag=CCO53_18810 NZ_NPLZ01000012.1 Protein Homology CDS 33590 34630 . + 0 ID=cds-WP_000090727.1;Parent=gene-CCO53_RS18840;Dbxref=GenBank:WP_000090727.1;Name=WP_000090727.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=CCO53_RS18840;product=biotin synthase BioB;protein_id=WP_000090727.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 34627 35784 . + . ID=gene-CCO53_RS18845;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=CCO53_RS18845;old_locus_tag=CCO53_18815 NZ_NPLZ01000012.1 Protein Homology CDS 34627 35784 . + 0 ID=cds-WP_001628673.1;Parent=gene-CCO53_RS18845;Dbxref=GenBank:WP_001628673.1;Name=WP_001628673.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=CCO53_RS18845;product=8-amino-7-oxononanoate synthase;protein_id=WP_001628673.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 35768 36523 . + . ID=gene-CCO53_RS18850;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=CCO53_RS18850;old_locus_tag=CCO53_18820 NZ_NPLZ01000012.1 Protein Homology CDS 35768 36523 . + 0 ID=cds-WP_024798377.1;Parent=gene-CCO53_RS18850;Dbxref=GenBank:WP_024798377.1;Name=WP_024798377.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=CCO53_RS18850;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_024798377.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 36516 37202 . + . ID=gene-CCO53_RS18855;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO53_RS18855;old_locus_tag=CCO53_18825 NZ_NPLZ01000012.1 Protein Homology CDS 36516 37202 . + 0 ID=cds-WP_000167222.1;Parent=gene-CCO53_RS18855;Dbxref=GenBank:WP_000167222.1;Name=WP_000167222.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=CCO53_RS18855;product=dethiobiotin synthase;protein_id=WP_000167222.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 37853 39874 . + . ID=gene-CCO53_RS18865;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CCO53_RS18865;old_locus_tag=CCO53_18835 NZ_NPLZ01000012.1 Protein Homology CDS 37853 39874 . + 0 ID=cds-WP_058332013.1;Parent=gene-CCO53_RS18865;Dbxref=GenBank:WP_058332013.1;Name=WP_058332013.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=CCO53_RS18865;product=excinuclease ABC subunit UvrB;protein_id=WP_058332013.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 39961 40869 . - . ID=gene-CCO53_RS18870;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=CCO53_RS18870;old_locus_tag=CCO53_18840 NZ_NPLZ01000012.1 Protein Homology CDS 39961 40869 . - 0 ID=cds-WP_001246033.1;Parent=gene-CCO53_RS18870;Dbxref=GenBank:WP_001246033.1;Name=WP_001246033.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=CCO53_RS18870;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246033.1;transl_table=11 NZ_NPLZ01000012.1 cmsearch riboswitch 41134 41278 . + . ID=id-NZ_NPLZ01000012.1:41134..41278;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPLZ01000012.1 RefSeq gene 41266 42255 . + . ID=gene-CCO53_RS18875;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CCO53_RS18875;old_locus_tag=CCO53_18845 NZ_NPLZ01000012.1 Protein Homology CDS 41266 42255 . + 0 ID=cds-WP_000168180.1;Parent=gene-CCO53_RS18875;Dbxref=GenBank:WP_000168180.1;Name=WP_000168180.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=CCO53_RS18875;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168180.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 42277 42789 . + . ID=gene-CCO53_RS18880;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=CCO53_RS18880;old_locus_tag=CCO53_18850 NZ_NPLZ01000012.1 Protein Homology CDS 42277 42789 . + 0 ID=cds-WP_000084604.1;Parent=gene-CCO53_RS18880;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=CCO53_RS18880;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 42792 43277 . + . ID=gene-CCO53_RS18885;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CCO53_RS18885;old_locus_tag=CCO53_18855 NZ_NPLZ01000012.1 Protein Homology CDS 42792 43277 . + 0 ID=cds-WP_080198538.1;Parent=gene-CCO53_RS18885;Dbxref=GenBank:WP_080198538.1;Name=WP_080198538.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=CCO53_RS18885;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_080198538.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 43270 43515 . + . ID=gene-CCO53_RS18890;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=CCO53_RS18890;old_locus_tag=CCO53_18860 NZ_NPLZ01000012.1 Protein Homology CDS 43270 43515 . + 0 ID=cds-WP_000598596.1;Parent=gene-CCO53_RS18890;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=CCO53_RS18890;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 43517 43969 . + . ID=gene-CCO53_RS18895;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=CCO53_RS18895;old_locus_tag=CCO53_18865 NZ_NPLZ01000012.1 Protein Homology CDS 43517 43969 . + 0 ID=cds-WP_094887792.1;Parent=gene-CCO53_RS18895;Dbxref=GenBank:WP_094887792.1;Name=WP_094887792.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=CCO53_RS18895;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_094887792.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 44017 44721 . + . ID=gene-CCO53_RS18900;Name=CCO53_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18900;old_locus_tag=CCO53_18870 NZ_NPLZ01000012.1 Protein Homology CDS 44017 44721 . + 0 ID=cds-WP_000373611.1;Parent=gene-CCO53_RS18900;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=CCO53_RS18900;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 44868 45575 . + . ID=gene-CCO53_RS18910;Name=CCO53_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18910;old_locus_tag=CCO53_18880 NZ_NPLZ01000012.1 Protein Homology CDS 44868 45575 . + 0 ID=cds-WP_094887793.1;Parent=gene-CCO53_RS18910;Dbxref=GenBank:WP_094887793.1;Name=WP_094887793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=CCO53_RS18910;product=Bax inhibitor-1 family protein;protein_id=WP_094887793.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 45598 46206 . + . ID=gene-CCO53_RS18915;Name=CCO53_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18915;old_locus_tag=CCO53_18885 NZ_NPLZ01000012.1 Protein Homology CDS 45598 46206 . + 0 ID=cds-WP_094887794.1;Parent=gene-CCO53_RS18915;Dbxref=GenBank:WP_094887794.1;Name=WP_094887794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=CCO53_RS18915;product=hypothetical protein;protein_id=WP_094887794.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 46214 46774 . + . ID=gene-CCO53_RS18920;Name=CCO53_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18920;old_locus_tag=CCO53_18890 NZ_NPLZ01000012.1 Protein Homology CDS 46214 46774 . + 0 ID=cds-WP_001052202.1;Parent=gene-CCO53_RS18920;Dbxref=GenBank:WP_001052202.1;Name=WP_001052202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=CCO53_RS18920;product=hypothetical protein;protein_id=WP_001052202.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 46777 47739 . - . ID=gene-CCO53_RS18925;Name=CCO53_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18925;old_locus_tag=CCO53_18895 NZ_NPLZ01000012.1 Protein Homology CDS 46777 47739 . - 0 ID=cds-WP_080160250.1;Parent=gene-CCO53_RS18925;Dbxref=GenBank:WP_080160250.1;Name=WP_080160250.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=CCO53_RS18925;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_080160250.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 47739 48980 . - . ID=gene-CCO53_RS18930;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=CCO53_RS18930;old_locus_tag=CCO53_18900 NZ_NPLZ01000012.1 Protein Homology CDS 47739 48980 . - 0 ID=cds-WP_000649639.1;Parent=gene-CCO53_RS18930;Dbxref=GenBank:WP_000649639.1;Name=WP_000649639.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=CCO53_RS18930;product=cardiolipin synthase ClsB;protein_id=WP_000649639.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 48977 49735 . - . ID=gene-CCO53_RS18935;Name=CCO53_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18935;old_locus_tag=CCO53_18905 NZ_NPLZ01000012.1 Protein Homology CDS 48977 49735 . - 0 ID=cds-WP_000192039.1;Parent=gene-CCO53_RS18935;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=CCO53_RS18935;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 49868 50278 . + . ID=gene-CCO53_RS18940;Name=CCO53_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18940;old_locus_tag=CCO53_18910 NZ_NPLZ01000012.1 Protein Homology CDS 49868 50278 . + 0 ID=cds-WP_000871970.1;Parent=gene-CCO53_RS18940;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=CCO53_RS18940;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 50240 51346 . - . ID=gene-CCO53_RS18945;Name=CCO53_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18945;old_locus_tag=CCO53_18915 NZ_NPLZ01000012.1 Protein Homology CDS 50240 51346 . - 0 ID=cds-WP_076726311.1;Parent=gene-CCO53_RS18945;Dbxref=GenBank:WP_076726311.1;Name=WP_076726311.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=CCO53_RS18945;product=ABC transporter permease;protein_id=WP_076726311.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 51462 52592 . - . ID=gene-CCO53_RS18950;Name=CCO53_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18950;old_locus_tag=CCO53_18920 NZ_NPLZ01000012.1 Protein Homology CDS 51462 52592 . - 0 ID=cds-WP_080198562.1;Parent=gene-CCO53_RS18950;Dbxref=GenBank:WP_080198562.1;Name=WP_080198562.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=CCO53_RS18950;product=ABC transporter permease;protein_id=WP_080198562.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 52585 54321 . - . ID=gene-CCO53_RS18955;Name=CCO53_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18955;old_locus_tag=CCO53_18925 NZ_NPLZ01000012.1 Protein Homology CDS 52585 54321 . - 0 ID=cds-WP_001287612.1;Parent=gene-CCO53_RS18955;Dbxref=GenBank:WP_001287612.1;Name=WP_001287612.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=CCO53_RS18955;product=ATP-binding cassette domain-containing protein;protein_id=WP_001287612.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 54314 55309 . - . ID=gene-CCO53_RS18960;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=CCO53_RS18960;old_locus_tag=CCO53_18930 NZ_NPLZ01000012.1 Protein Homology CDS 54314 55309 . - 0 ID=cds-WP_058331836.1;Parent=gene-CCO53_RS18960;Dbxref=GenBank:WP_058331836.1;Name=WP_058331836.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=CCO53_RS18960;product=secretion protein HlyD;protein_id=WP_058331836.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 55309 55983 . - . ID=gene-CCO53_RS18965;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=CCO53_RS18965;old_locus_tag=CCO53_18935 NZ_NPLZ01000012.1 Protein Homology CDS 55309 55983 . - 0 ID=cds-WP_001025254.1;Parent=gene-CCO53_RS18965;Dbxref=GenBank:WP_001025254.1;Name=WP_001025254.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=CCO53_RS18965;product=transcriptional regulator CecR;protein_id=WP_001025254.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 56213 57577 . + . ID=gene-CCO53_RS18970;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=CCO53_RS18970;old_locus_tag=CCO53_18940 NZ_NPLZ01000012.1 Protein Homology CDS 56213 57577 . + 0 ID=cds-WP_000007059.1;Parent=gene-CCO53_RS18970;Dbxref=GenBank:WP_000007059.1;Name=WP_000007059.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=CCO53_RS18970;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007059.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 57785 59929 . + . ID=gene-CCO53_RS18975;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=CCO53_RS18975;old_locus_tag=CCO53_18945 NZ_NPLZ01000012.1 Protein Homology CDS 57785 59929 . + 0 ID=cds-WP_001218630.1;Parent=gene-CCO53_RS18975;Dbxref=GenBank:WP_001218630.1;Name=WP_001218630.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=CCO53_RS18975;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218630.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 59959 60933 . + . ID=gene-CCO53_RS18980;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=CCO53_RS18980;old_locus_tag=CCO53_18950 NZ_NPLZ01000012.1 Protein Homology CDS 59959 60933 . + 0 ID=cds-WP_061372142.1;Parent=gene-CCO53_RS18980;Dbxref=GenBank:WP_061372142.1;Name=WP_061372142.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=CCO53_RS18980;product=DNA-binding protein YbiB;protein_id=WP_061372142.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 61089 61349 . - . ID=gene-CCO53_RS18985;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=CCO53_RS18985;old_locus_tag=CCO53_18955 NZ_NPLZ01000012.1 Protein Homology CDS 61089 61349 . - 0 ID=cds-WP_000849089.1;Parent=gene-CCO53_RS18985;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=CCO53_RS18985;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 61634 61900 . - . ID=gene-CCO53_RS18990;Name=CCO53_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS18990;old_locus_tag=CCO53_18960 NZ_NPLZ01000012.1 Protein Homology CDS 61634 61900 . - 0 ID=cds-WP_000146332.1;Parent=gene-CCO53_RS18990;Dbxref=GenBank:WP_000146332.1;Name=WP_000146332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=CCO53_RS18990;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146332.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 62105 63031 . + . ID=gene-CCO53_RS18995;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=CCO53_RS18995;old_locus_tag=CCO53_18965 NZ_NPLZ01000012.1 Protein Homology CDS 62105 63031 . + 0 ID=cds-WP_001275962.1;Parent=gene-CCO53_RS18995;Dbxref=GenBank:WP_001275962.1;Name=WP_001275962.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=CCO53_RS18995;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275962.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 63028 65250 . - . ID=gene-CCO53_RS19000;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=CCO53_RS19000;old_locus_tag=CCO53_18970 NZ_NPLZ01000012.1 Protein Homology CDS 63028 65250 . - 0 ID=cds-WP_061372141.1;Parent=gene-CCO53_RS19000;Dbxref=GenBank:WP_061372141.1;Name=WP_061372141.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=CCO53_RS19000;product=mechanosensitive channel protein;protein_id=WP_061372141.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 65369 66091 . - . ID=gene-CCO53_RS19005;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=CCO53_RS19005;old_locus_tag=CCO53_18975 NZ_NPLZ01000012.1 Protein Homology CDS 65369 66091 . - 0 ID=cds-WP_000569093.1;Parent=gene-CCO53_RS19005;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=CCO53_RS19005;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 66088 66747 . - . ID=gene-CCO53_RS19010;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=CCO53_RS19010;old_locus_tag=CCO53_18980 NZ_NPLZ01000012.1 Protein Homology CDS 66088 66747 . - 0 ID=cds-WP_001159076.1;Parent=gene-CCO53_RS19010;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=CCO53_RS19010;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 66893 67639 . - . ID=gene-CCO53_RS19015;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=CCO53_RS19015;old_locus_tag=CCO53_18985 NZ_NPLZ01000012.1 Protein Homology CDS 66893 67639 . - 0 ID=cds-WP_000838671.1;Parent=gene-CCO53_RS19015;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=CCO53_RS19015;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 68116 68619 . - . ID=gene-CCO53_RS19020;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=CCO53_RS19020;old_locus_tag=CCO53_18990 NZ_NPLZ01000012.1 Protein Homology CDS 68116 68619 . - 0 ID=cds-WP_000100805.1;Parent=gene-CCO53_RS19020;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=CCO53_RS19020;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 68922 69809 . - . ID=gene-CCO53_RS19025;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=CCO53_RS19025;old_locus_tag=CCO53_18995 NZ_NPLZ01000012.1 Protein Homology CDS 68922 69809 . - 0 ID=cds-WP_001119555.1;Parent=gene-CCO53_RS19025;Dbxref=GenBank:WP_001119555.1;Name=WP_001119555.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=CCO53_RS19025;product=threonine/homoserine exporter RhtA;protein_id=WP_001119555.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 70163 70678 . + . ID=gene-CCO53_RS19030;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=CCO53_RS19030;old_locus_tag=CCO53_19000 NZ_NPLZ01000012.1 Protein Homology CDS 70163 70678 . + 0 ID=cds-WP_000716763.1;Parent=gene-CCO53_RS19030;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=CCO53_RS19030;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 70741 72321 . - . ID=gene-CCO53_RS19035;Name=CCO53_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19035;old_locus_tag=CCO53_19005 NZ_NPLZ01000012.1 Protein Homology CDS 70741 72321 . - 0 ID=cds-WP_094887795.1;Parent=gene-CCO53_RS19035;Dbxref=GenBank:WP_094887795.1;Name=WP_094887795.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=CCO53_RS19035;product=phosphoethanolamine transferase;protein_id=WP_094887795.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 72586 72714 . - . ID=gene-CCO53_RS19040;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=CCO53_RS19040;old_locus_tag=CCO53_19010 NZ_NPLZ01000012.1 Protein Homology CDS 72586 72714 . - 0 ID=cds-WP_001001755.1;Parent=gene-CCO53_RS19040;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=CCO53_RS19040;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 72900 73373 . + . ID=gene-CCO53_RS19045;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=CCO53_RS19045;old_locus_tag=CCO53_19015 NZ_NPLZ01000012.1 Protein Homology CDS 72900 73373 . + 0 ID=cds-WP_000533542.1;Parent=gene-CCO53_RS19045;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=CCO53_RS19045;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 73370 74482 . + . ID=gene-CCO53_RS19050;Name=CCO53_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19050;old_locus_tag=CCO53_19020 NZ_NPLZ01000012.1 Protein Homology CDS 73370 74482 . + 0 ID=cds-WP_001534219.1;Parent=gene-CCO53_RS19050;Dbxref=GenBank:WP_001534219.1;Name=WP_001534219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=CCO53_RS19050;product=anion transporter;protein_id=WP_001534219.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 74526 75446 . - . ID=gene-CCO53_RS19055;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=CCO53_RS19055;old_locus_tag=CCO53_19025 NZ_NPLZ01000012.1 Protein Homology CDS 74526 75446 . - 0 ID=cds-WP_001056404.1;Parent=gene-CCO53_RS19055;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=CCO53_RS19055;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 75666 77261 . + . ID=gene-CCO53_RS19060;Name=CCO53_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19060;old_locus_tag=CCO53_19030 NZ_NPLZ01000012.1 Protein Homology CDS 75666 77261 . + 0 ID=cds-WP_000961480.1;Parent=gene-CCO53_RS19060;Dbxref=GenBank:WP_000961480.1;Name=WP_000961480.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=CCO53_RS19060;product=ABC-F family ATPase;protein_id=WP_000961480.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 77383 78648 . - . ID=gene-CCO53_RS19065;Name=CCO53_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19065;old_locus_tag=CCO53_19035 NZ_NPLZ01000012.1 Protein Homology CDS 77383 78648 . - 0 ID=cds-WP_080160251.1;Parent=gene-CCO53_RS19065;Dbxref=GenBank:WP_080160251.1;Name=WP_080160251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=CCO53_RS19065;product=DUF1479 domain-containing protein;protein_id=WP_080160251.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 78910 79719 . + . ID=gene-CCO53_RS19070;Name=CCO53_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19070;old_locus_tag=CCO53_19040 NZ_NPLZ01000012.1 Protein Homology CDS 78910 79719 . + 0 ID=cds-WP_000217910.1;Parent=gene-CCO53_RS19070;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=CCO53_RS19070;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 79797 82229 . - . ID=gene-CCO53_RS19075;Name=CCO53_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19075;old_locus_tag=CCO53_19045 NZ_NPLZ01000012.1 Protein Homology CDS 79797 82229 . - 0 ID=cds-WP_023993608.1;Parent=gene-CCO53_RS19075;Dbxref=GenBank:WP_023993608.1;Name=WP_023993608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=CCO53_RS19075;product=glycyl radical protein;protein_id=WP_023993608.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 82235 83134 . - . ID=gene-CCO53_RS19080;Name=CCO53_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19080;old_locus_tag=CCO53_19050 NZ_NPLZ01000012.1 Protein Homology CDS 82235 83134 . - 0 ID=cds-WP_000576951.1;Parent=gene-CCO53_RS19080;Dbxref=GenBank:WP_000576951.1;Name=WP_000576951.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=CCO53_RS19080;product=glycyl-radical enzyme activating protein;protein_id=WP_000576951.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 83412 84161 . - . ID=gene-CCO53_RS19085;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=CCO53_RS19085;old_locus_tag=CCO53_19055 NZ_NPLZ01000012.1 Protein Homology CDS 83412 84161 . - 0 ID=cds-WP_000829280.1;Parent=gene-CCO53_RS19085;Dbxref=GenBank:WP_000829280.1;Name=WP_000829280.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=CCO53_RS19085;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829280.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 84161 85396 . - . ID=gene-CCO53_RS19090;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=CCO53_RS19090;old_locus_tag=CCO53_19060 NZ_NPLZ01000012.1 Protein Homology CDS 84161 85396 . - 0 ID=cds-WP_000395792.1;Parent=gene-CCO53_RS19090;Dbxref=GenBank:WP_000395792.1;Name=WP_000395792.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=CCO53_RS19090;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000395792.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 85600 86541 . + . ID=gene-CCO53_RS19095;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=CCO53_RS19095;old_locus_tag=CCO53_19065 NZ_NPLZ01000012.1 Protein Homology CDS 85600 86541 . + 0 ID=cds-WP_001030503.1;Parent=gene-CCO53_RS19095;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=CCO53_RS19095;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 86552 88423 . + . ID=gene-CCO53_RS19100;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=CCO53_RS19100;old_locus_tag=CCO53_19070 NZ_NPLZ01000012.1 Protein Homology CDS 86552 88423 . + 0 ID=cds-WP_058331831.1;Parent=gene-CCO53_RS19100;Dbxref=GenBank:WP_058331831.1;Name=WP_058331831.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=CCO53_RS19100;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_058331831.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 88456 89994 . + . ID=gene-CCO53_RS19105;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=CCO53_RS19105;old_locus_tag=CCO53_19075 NZ_NPLZ01000012.1 Protein Homology CDS 88456 89994 . + 0 ID=cds-WP_000191427.1;Parent=gene-CCO53_RS19105;Dbxref=GenBank:WP_000191427.1;Name=WP_000191427.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=CCO53_RS19105;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191427.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 90055 90975 . + . ID=gene-CCO53_RS19110;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=CCO53_RS19110;old_locus_tag=CCO53_19080 NZ_NPLZ01000012.1 Protein Homology CDS 90055 90975 . + 0 ID=cds-WP_000936067.1;Parent=gene-CCO53_RS19110;Dbxref=GenBank:WP_000936067.1;Name=WP_000936067.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=CCO53_RS19110;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936067.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 90978 91889 . + . ID=gene-CCO53_RS19115;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=CCO53_RS19115;old_locus_tag=CCO53_19085 NZ_NPLZ01000012.1 Protein Homology CDS 90978 91889 . + 0 ID=cds-WP_001236024.1;Parent=gene-CCO53_RS19115;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=CCO53_RS19115;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 91980 93305 . - . ID=gene-CCO53_RS19120;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CCO53_RS19120;old_locus_tag=CCO53_19090 NZ_NPLZ01000012.1 Protein Homology CDS 91980 93305 . - 0 ID=cds-WP_058331830.1;Parent=gene-CCO53_RS19120;Dbxref=GenBank:WP_058331830.1;Name=WP_058331830.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=CCO53_RS19120;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_058331830.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 93536 93919 . + . ID=gene-CCO53_RS19125;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=CCO53_RS19125;old_locus_tag=CCO53_19095 NZ_NPLZ01000012.1 Protein Homology CDS 93536 93919 . + 0 ID=cds-WP_000259651.1;Parent=gene-CCO53_RS19125;Dbxref=GenBank:WP_000259651.1;Name=WP_000259651.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=CCO53_RS19125;product=biofilm formation regulator BssR;protein_id=WP_000259651.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 94037 95158 . + . ID=gene-CCO53_RS19130;Name=CCO53_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19130;old_locus_tag=CCO53_19100 NZ_NPLZ01000012.1 Protein Homology CDS 94037 95158 . + 0 ID=cds-WP_058331829.1;Parent=gene-CCO53_RS19130;Dbxref=GenBank:WP_058331829.1;Name=WP_058331829.1;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=CCO53_RS19130;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_058331829.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 95155 95781 . - . ID=gene-CCO53_RS19135;Name=CCO53_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19135;old_locus_tag=CCO53_19105 NZ_NPLZ01000012.1 Protein Homology CDS 95155 95781 . - 0 ID=cds-WP_000631910.1;Parent=gene-CCO53_RS19135;Dbxref=GenBank:WP_000631910.1;Name=WP_000631910.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=CCO53_RS19135;product=glutathione S-transferase family protein;protein_id=WP_000631910.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 96025 97227 . + . ID=gene-CCO53_RS19140;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=CCO53_RS19140;old_locus_tag=CCO53_19110 NZ_NPLZ01000012.1 Protein Homology CDS 96025 97227 . + 0 ID=cds-WP_000195712.1;Parent=gene-CCO53_RS19140;Dbxref=GenBank:WP_000195712.1;Name=WP_000195712.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=CCO53_RS19140;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195712.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 97273 98031 . - . ID=gene-CCO53_RS19145;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=CCO53_RS19145;old_locus_tag=CCO53_19115 NZ_NPLZ01000012.1 Protein Homology CDS 97273 98031 . - 0 ID=cds-WP_000450106.1;Parent=gene-CCO53_RS19145;Dbxref=GenBank:WP_000450106.1;Name=WP_000450106.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=CCO53_RS19145;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450106.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 98103 98711 . - . ID=gene-CCO53_RS19150;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=CCO53_RS19150;old_locus_tag=CCO53_19120 NZ_NPLZ01000012.1 Protein Homology CDS 98103 98711 . - 0 ID=cds-WP_001531378.1;Parent=gene-CCO53_RS19150;Dbxref=GenBank:WP_001531378.1;Name=WP_001531378.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=CCO53_RS19150;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001531378.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 99024 100256 . + . ID=gene-CCO53_RS19155;Name=CCO53_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19155;old_locus_tag=CCO53_19125 NZ_NPLZ01000012.1 Protein Homology CDS 99024 100256 . + 0 ID=cds-WP_094887796.1;Parent=gene-CCO53_RS19155;Dbxref=GenBank:WP_094887796.1;Name=WP_094887796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=CCO53_RS19155;product=MFS transporter;protein_id=WP_094887796.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 100310 101125 . - . ID=gene-CCO53_RS19160;Name=CCO53_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19160;old_locus_tag=CCO53_19130 NZ_NPLZ01000012.1 Protein Homology CDS 100310 101125 . - 0 ID=cds-WP_094887797.1;Parent=gene-CCO53_RS19160;Dbxref=GenBank:WP_094887797.1;Name=WP_094887797.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=CCO53_RS19160;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_094887797.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 101122 102333 . - . ID=gene-CCO53_RS19165;Name=CCO53_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19165;old_locus_tag=CCO53_19135 NZ_NPLZ01000012.1 Protein Homology CDS 101122 102333 . - 0 ID=cds-WP_000217418.1;Parent=gene-CCO53_RS19165;Dbxref=GenBank:WP_000217418.1;Name=WP_000217418.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=CCO53_RS19165;product=MFS transporter;protein_id=WP_000217418.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 102501 103121 . + . ID=gene-CCO53_RS19170;Name=CCO53_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19170;old_locus_tag=CCO53_19140 NZ_NPLZ01000012.1 Protein Homology CDS 102501 103121 . + 0 ID=cds-WP_094887798.1;Parent=gene-CCO53_RS19170;Dbxref=GenBank:WP_094887798.1;Name=WP_094887798.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=CCO53_RS19170;product=TetR/AcrR family transcriptional regulator;protein_id=WP_094887798.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 103238 104923 . - . ID=gene-CCO53_RS19180;Name=CCO53_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19180;old_locus_tag=CCO53_19145 NZ_NPLZ01000012.1 Protein Homology CDS 103238 104923 . - 0 ID=cds-WP_001024853.1;Parent=gene-CCO53_RS19180;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=CCO53_RS19180;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 105194 105571 . + . ID=gene-CCO53_RS19185;Name=CCO53_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19185;old_locus_tag=CCO53_19150 NZ_NPLZ01000012.1 Protein Homology CDS 105194 105571 . + 0 ID=cds-WP_000680850.1;Parent=gene-CCO53_RS19185;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=CCO53_RS19185;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 105603 105866 . - . ID=gene-CCO53_RS19190;Name=CCO53_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19190;old_locus_tag=CCO53_19155 NZ_NPLZ01000012.1 Protein Homology CDS 105603 105866 . - 0 ID=cds-WP_000495513.1;Parent=gene-CCO53_RS19190;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=CCO53_RS19190;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 106036 106326 . + . ID=gene-CCO53_RS19195;Name=CCO53_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19195;old_locus_tag=CCO53_19160 NZ_NPLZ01000012.1 Protein Homology CDS 106036 106326 . + 0 ID=cds-WP_001259137.1;Parent=gene-CCO53_RS19195;Dbxref=GenBank:WP_001259137.1;Name=WP_001259137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=CCO53_RS19195;product=YbjC family protein;protein_id=WP_001259137.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 106310 107032 . + . ID=gene-CCO53_RS19200;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CCO53_RS19200;old_locus_tag=CCO53_19165 NZ_NPLZ01000012.1 Protein Homology CDS 106310 107032 . + 0 ID=cds-WP_000075300.1;Parent=gene-CCO53_RS19200;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=CCO53_RS19200;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 107090 107992 . + . ID=gene-CCO53_RS19205;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=CCO53_RS19205;old_locus_tag=CCO53_19170 NZ_NPLZ01000012.1 Protein Homology CDS 107090 107992 . + 0 ID=cds-WP_000684361.1;Parent=gene-CCO53_RS19205;Dbxref=GenBank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=CCO53_RS19205;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 108089 108565 . + . ID=gene-CCO53_RS19210;Name=CCO53_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19210;old_locus_tag=CCO53_19175 NZ_NPLZ01000012.1 Protein Homology CDS 108089 108565 . + 0 ID=cds-WP_000624810.1;Parent=gene-CCO53_RS19210;Dbxref=GenBank:WP_000624810.1;Name=WP_000624810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=CCO53_RS19210;product=YbjN domain-containing protein;protein_id=WP_000624810.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 108914 110026 . + . ID=gene-CCO53_RS19215;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=CCO53_RS19215;old_locus_tag=CCO53_19180 NZ_NPLZ01000012.1 Protein Homology CDS 108914 110026 . + 0 ID=cds-WP_000125769.1;Parent=gene-CCO53_RS19215;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=CCO53_RS19215;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 110114 111247 . + . ID=gene-CCO53_RS19220;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=CCO53_RS19220;old_locus_tag=CCO53_19185 NZ_NPLZ01000012.1 Protein Homology CDS 110114 111247 . + 0 ID=cds-WP_058331308.1;Parent=gene-CCO53_RS19220;Dbxref=GenBank:WP_058331308.1;Name=WP_058331308.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=CCO53_RS19220;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_058331308.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 111257 112210 . + . ID=gene-CCO53_RS19225;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=CCO53_RS19225;old_locus_tag=CCO53_19190 NZ_NPLZ01000012.1 Protein Homology CDS 111257 112210 . + 0 ID=cds-WP_000105453.1;Parent=gene-CCO53_RS19225;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=CCO53_RS19225;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 112207 113052 . + . ID=gene-CCO53_RS19230;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=CCO53_RS19230;old_locus_tag=CCO53_19195 NZ_NPLZ01000012.1 Protein Homology CDS 112207 113052 . + 0 ID=cds-WP_001061629.1;Parent=gene-CCO53_RS19230;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=CCO53_RS19230;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 113126 113599 . + . ID=gene-CCO53_RS19235;Name=CCO53_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19235;old_locus_tag=CCO53_19200 NZ_NPLZ01000012.1 Protein Homology CDS 113126 113599 . + 0 ID=cds-WP_000505788.1;Parent=gene-CCO53_RS19235;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=CCO53_RS19235;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 113642 114769 . + . ID=gene-CCO53_RS19240;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=CCO53_RS19240;old_locus_tag=CCO53_19205 NZ_NPLZ01000012.1 Protein Homology CDS 113642 114769 . + 0 ID=cds-WP_094887799.1;Parent=gene-CCO53_RS19240;Dbxref=GenBank:WP_094887799.1;Name=WP_094887799.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=CCO53_RS19240;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_094887799.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 115064 116407 . + . ID=gene-CCO53_RS19245;Name=CCO53_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19245;old_locus_tag=CCO53_19210 NZ_NPLZ01000012.1 Protein Homology CDS 115064 116407 . + 0 ID=cds-WP_000399318.1;Parent=gene-CCO53_RS19245;Dbxref=GenBank:WP_000399318.1;Name=WP_000399318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=CCO53_RS19245;product=PTS sugar transporter subunit IIC;protein_id=WP_000399318.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 116437 116757 . + . ID=gene-CCO53_RS19250;Name=CCO53_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19250;old_locus_tag=CCO53_19215 NZ_NPLZ01000012.1 Protein Homology CDS 116437 116757 . + 0 ID=cds-WP_000655399.1;Parent=gene-CCO53_RS19250;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=CCO53_RS19250;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 116767 118254 . + . ID=gene-CCO53_RS19255;Name=CCO53_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19255;old_locus_tag=CCO53_19220 NZ_NPLZ01000012.1 Protein Homology CDS 116767 118254 . + 0 ID=cds-WP_058331310.1;Parent=gene-CCO53_RS19255;Dbxref=GenBank:WP_058331310.1;Name=WP_058331310.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=CCO53_RS19255;product=sulfatase;protein_id=WP_058331310.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 118458 119189 . - . ID=gene-CCO53_RS19260;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=CCO53_RS19260;old_locus_tag=CCO53_19225 NZ_NPLZ01000012.1 Protein Homology CDS 118458 119189 . - 0 ID=cds-WP_000737538.1;Parent=gene-CCO53_RS19260;Dbxref=GenBank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=CCO53_RS19260;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 119426 120094 . - . ID=gene-CCO53_RS19265;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=CCO53_RS19265;old_locus_tag=CCO53_19230 NZ_NPLZ01000012.1 Protein Homology CDS 119426 120094 . - 0 ID=cds-WP_000895396.1;Parent=gene-CCO53_RS19265;Dbxref=GenBank:WP_000895396.1;Name=WP_000895396.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=CCO53_RS19265;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 120094 120810 . - . ID=gene-CCO53_RS19270;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=CCO53_RS19270;old_locus_tag=CCO53_19235 NZ_NPLZ01000012.1 Protein Homology CDS 120094 120810 . - 0 ID=cds-WP_001001677.1;Parent=gene-CCO53_RS19270;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=CCO53_RS19270;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 120817 121548 . - . ID=gene-CCO53_RS19275;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=CCO53_RS19275;old_locus_tag=CCO53_19240 NZ_NPLZ01000012.1 Protein Homology CDS 120817 121548 . - 0 ID=cds-WP_000756586.1;Parent=gene-CCO53_RS19275;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=CCO53_RS19275;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 121566 122294 . - . ID=gene-CCO53_RS19280;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=CCO53_RS19280;old_locus_tag=CCO53_19245 NZ_NPLZ01000012.1 Protein Homology CDS 121566 122294 . - 0 ID=cds-WP_000027181.1;Parent=gene-CCO53_RS19280;Dbxref=GenBank:WP_000027181.1;Name=WP_000027181.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=CCO53_RS19280;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027181.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 122524 123039 . - . ID=gene-CCO53_RS19285;Name=CCO53_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19285;old_locus_tag=CCO53_19250 NZ_NPLZ01000012.1 Protein Homology CDS 122524 123039 . - 0 ID=cds-WP_001270724.1;Parent=gene-CCO53_RS19285;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=CCO53_RS19285;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 123167 123490 . + . ID=gene-CCO53_RS19290;Name=CCO53_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19290;old_locus_tag=CCO53_19255 NZ_NPLZ01000012.1 Protein Homology CDS 123167 123490 . + 0 ID=cds-WP_001160725.1;Parent=gene-CCO53_RS19290;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO53_RS19290;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 123487 124317 . + . ID=gene-CCO53_RS19295;Name=CCO53_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19295;old_locus_tag=CCO53_19260 NZ_NPLZ01000012.1 Protein Homology CDS 123487 124317 . + 0 ID=cds-WP_001202294.1;Parent=gene-CCO53_RS19295;Dbxref=GenBank:WP_001202294.1;Name=WP_001202294.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=CCO53_RS19295;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_001202294.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 124314 125327 . - . ID=gene-CCO53_RS19300;Name=CCO53_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19300;old_locus_tag=CCO53_19265 NZ_NPLZ01000012.1 Protein Homology CDS 124314 125327 . - 0 ID=cds-WP_000866904.1;Parent=gene-CCO53_RS19300;Dbxref=GenBank:WP_000866904.1;Name=WP_000866904.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=CCO53_RS19300;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_000866904.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 125423 126856 . - . ID=gene-CCO53_RS19305;Name=CCO53_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19305;old_locus_tag=CCO53_19270 NZ_NPLZ01000012.1 Protein Homology CDS 125423 126856 . - 0 ID=cds-WP_079954592.1;Parent=gene-CCO53_RS19305;Dbxref=GenBank:WP_079954592.1;Name=WP_079954592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=CCO53_RS19305;product=SDR family oxidoreductase;protein_id=WP_079954592.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 126867 127868 . - . ID=gene-CCO53_RS19310;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=CCO53_RS19310;old_locus_tag=CCO53_19275 NZ_NPLZ01000012.1 Protein Homology CDS 126867 127868 . - 0 ID=cds-WP_000566346.1;Parent=gene-CCO53_RS19310;Dbxref=GenBank:WP_000566346.1;Name=WP_000566346.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=CCO53_RS19310;product=low-specificity L-threonine aldolase;protein_id=WP_000566346.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 127907 129625 . - . ID=gene-CCO53_RS19315;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=CCO53_RS19315;old_locus_tag=CCO53_19280 NZ_NPLZ01000012.1 Protein Homology CDS 127907 129625 . - 0 ID=cds-WP_000815309.1;Parent=gene-CCO53_RS19315;Dbxref=GenBank:WP_000815309.1;Name=WP_000815309.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=CCO53_RS19315;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815309.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 129783 130751 . - . ID=gene-CCO53_RS19320;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=CCO53_RS19320;old_locus_tag=CCO53_19285 NZ_NPLZ01000012.1 Protein Homology CDS 129783 130751 . - 0 ID=cds-WP_023216393.1;Parent=gene-CCO53_RS19320;Dbxref=GenBank:WP_023216393.1;Name=WP_023216393.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=CCO53_RS19320;product=NADH oxidoreductase;protein_id=WP_023216393.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 130763 132415 . - . ID=gene-CCO53_RS19325;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=CCO53_RS19325;old_locus_tag=CCO53_19290 NZ_NPLZ01000012.1 Protein Homology CDS 130763 132415 . - 0 ID=cds-WP_000458785.1;Parent=gene-CCO53_RS19325;Dbxref=GenBank:WP_000458785.1;Name=WP_000458785.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=CCO53_RS19325;product=hydroxylamine reductase;protein_id=WP_000458785.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 132559 133458 . - . ID=gene-CCO53_RS19330;Name=CCO53_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19330;old_locus_tag=CCO53_19295 NZ_NPLZ01000012.1 Protein Homology CDS 132559 133458 . - 0 ID=cds-WP_000491118.1;Parent=gene-CCO53_RS19330;Dbxref=GenBank:WP_000491118.1;Name=WP_000491118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=CCO53_RS19330;product=lysine exporter LysO family protein;protein_id=WP_000491118.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 133660 135318 . + . ID=gene-CCO53_RS19340;Name=CCO53_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19340;old_locus_tag=CCO53_19305 NZ_NPLZ01000012.1 Protein Homology CDS 133660 135318 . + 0 ID=cds-WP_000599765.1;Parent=gene-CCO53_RS19340;Dbxref=GenBank:WP_000599765.1;Name=WP_000599765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=CCO53_RS19340;product=ATP-dependent endonuclease;protein_id=WP_000599765.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 135315 136265 . - . ID=gene-CCO53_RS19345;Name=CCO53_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19345;old_locus_tag=CCO53_19310 NZ_NPLZ01000012.1 Protein Homology CDS 135315 136265 . - 0 ID=cds-WP_058331324.1;Parent=gene-CCO53_RS19345;Dbxref=GenBank:WP_058331324.1;Name=WP_058331324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=CCO53_RS19345;product=VirK/YbjX family protein;protein_id=WP_058331324.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 136411 137529 . + . ID=gene-CCO53_RS19350;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=CCO53_RS19350;old_locus_tag=CCO53_19315 NZ_NPLZ01000012.1 Protein Homology CDS 136411 137529 . + 0 ID=cds-WP_023202044.1;Parent=gene-CCO53_RS19350;Dbxref=GenBank:WP_023202044.1;Name=WP_023202044.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=CCO53_RS19350;product=macrolide transporter subunit MacA;protein_id=WP_023202044.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 137526 139472 . + . ID=gene-CCO53_RS19355;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=CCO53_RS19355;old_locus_tag=CCO53_19320 NZ_NPLZ01000012.1 Protein Homology CDS 137526 139472 . + 0 ID=cds-WP_094887800.1;Parent=gene-CCO53_RS19355;Dbxref=GenBank:WP_094887800.1;Name=WP_094887800.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=CCO53_RS19355;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_094887800.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 139602 139823 . - . ID=gene-CCO53_RS19365;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=CCO53_RS19365;old_locus_tag=CCO53_19330 NZ_NPLZ01000012.1 Protein Homology CDS 139602 139823 . - 0 ID=cds-WP_000447499.1;Parent=gene-CCO53_RS19365;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=CCO53_RS19365;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 139974 140051 . + . ID=gene-CCO53_RS24105;Name=CCO53_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24105 NZ_NPLZ01000012.1 Protein Homology CDS 139974 140051 . + 0 ID=cds-WP_212742690.1;Parent=gene-CCO53_RS24105;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=CCO53_RS24105;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 140147 140467 . + . ID=gene-CCO53_RS19370;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=CCO53_RS19370;old_locus_tag=CCO53_19335 NZ_NPLZ01000012.1 Protein Homology CDS 140147 140467 . + 0 ID=cds-WP_000520789.1;Parent=gene-CCO53_RS19370;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=CCO53_RS19370;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 140498 142774 . + . ID=gene-CCO53_RS19375;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=CCO53_RS19375;old_locus_tag=CCO53_19340 NZ_NPLZ01000012.1 Protein Homology CDS 140498 142774 . + 0 ID=cds-WP_000934064.1;Parent=gene-CCO53_RS19375;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=CCO53_RS19375;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 142985 143182 . - . ID=gene-CCO53_RS19380;Name=CCO53_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19380;old_locus_tag=CCO53_19345 NZ_NPLZ01000012.1 Protein Homology CDS 142985 143182 . - 0 ID=cds-WP_001117984.1;Parent=gene-CCO53_RS19380;Dbxref=GenBank:WP_001117984.1;Name=WP_001117984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=CCO53_RS19380;product=hypothetical protein;protein_id=WP_001117984.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq pseudogene 143344 143700 . - . ID=gene-CCO53_RS19385;Name=CCO53_RS19385;end_range=143700,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS19385;old_locus_tag=CCO53_19350;partial=true;pseudo=true NZ_NPLZ01000012.1 Protein Homology CDS 143344 143700 . - 0 ID=cds-CCO53_RS19385;Parent=gene-CCO53_RS19385;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=143700,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524896.1;locus_tag=CCO53_RS19385;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 144391 144478 . - . ID=gene-CCO53_RS19395;Name=CCO53_RS19395;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS19395;old_locus_tag=CCO53_19360 NZ_NPLZ01000012.1 tRNAscan-SE tRNA 144391 144478 . - . ID=rna-CCO53_RS19395;Parent=gene-CCO53_RS19395;anticodon=(pos:complement(144442..144444));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS19395;product=tRNA-Ser NZ_NPLZ01000012.1 tRNAscan-SE exon 144391 144478 . - . ID=exon-CCO53_RS19395-1;Parent=rna-CCO53_RS19395;anticodon=(pos:complement(144442..144444));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS19395;product=tRNA-Ser NZ_NPLZ01000012.1 RefSeq gene 144627 145304 . - . ID=gene-CCO53_RS19400;Name=CCO53_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19400;old_locus_tag=CCO53_19365 NZ_NPLZ01000012.1 Protein Homology CDS 144627 145304 . - 0 ID=cds-WP_000097893.1;Parent=gene-CCO53_RS19400;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=CCO53_RS19400;product=hydrolase;protein_id=WP_000097893.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 145324 146184 . - . ID=gene-CCO53_RS19405;Name=CCO53_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19405;old_locus_tag=CCO53_19370 NZ_NPLZ01000012.1 Protein Homology CDS 145324 146184 . - 0 ID=cds-WP_000809969.1;Parent=gene-CCO53_RS19405;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=CCO53_RS19405;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 146293 147204 . + . ID=gene-CCO53_RS19410;Name=CCO53_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19410;old_locus_tag=CCO53_19375 NZ_NPLZ01000012.1 Protein Homology CDS 146293 147204 . + 0 ID=cds-WP_000597928.1;Parent=gene-CCO53_RS19410;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=CCO53_RS19410;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 147295 147513 . - . ID=gene-CCO53_RS19415;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CCO53_RS19415;old_locus_tag=CCO53_19380 NZ_NPLZ01000012.1 Protein Homology CDS 147295 147513 . - 0 ID=cds-WP_001040187.1;Parent=gene-CCO53_RS19415;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=CCO53_RS19415;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 147825 148529 . - . ID=gene-CCO53_RS19425;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=CCO53_RS19425;old_locus_tag=CCO53_19390 NZ_NPLZ01000012.1 Protein Homology CDS 147825 148529 . - 0 ID=cds-WP_061372124.1;Parent=gene-CCO53_RS19425;Dbxref=GenBank:WP_061372124.1;Name=WP_061372124.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=CCO53_RS19425;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_061372124.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 148574 150295 . - . ID=gene-CCO53_RS19430;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=CCO53_RS19430;old_locus_tag=CCO53_19395 NZ_NPLZ01000012.1 Protein Homology CDS 148574 150295 . - 0 ID=cds-WP_001202257.1;Parent=gene-CCO53_RS19430;Dbxref=GenBank:WP_001202257.1;Name=WP_001202257.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=CCO53_RS19430;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202257.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 150296 152062 . - . ID=gene-CCO53_RS19435;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=CCO53_RS19435;old_locus_tag=CCO53_19400 NZ_NPLZ01000012.1 Protein Homology CDS 150296 152062 . - 0 ID=cds-WP_001044545.1;Parent=gene-CCO53_RS19435;Dbxref=GenBank:WP_001044545.1;Name=WP_001044545.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=CCO53_RS19435;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044545.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 152176 153144 . - . ID=gene-CCO53_RS19440;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CCO53_RS19440;old_locus_tag=CCO53_19405 NZ_NPLZ01000012.1 Protein Homology CDS 152176 153144 . - 0 ID=cds-WP_000537406.1;Parent=gene-CCO53_RS19440;Dbxref=GenBank:WP_000537406.1;Name=WP_000537406.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=CCO53_RS19440;product=thioredoxin-disulfide reductase;protein_id=WP_000537406.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 153691 154185 . + . ID=gene-CCO53_RS19450;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=CCO53_RS19450;old_locus_tag=CCO53_19415 NZ_NPLZ01000012.1 Protein Homology CDS 153691 154185 . + 0 ID=cds-WP_000228469.1;Parent=gene-CCO53_RS19450;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=CCO53_RS19450;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 154320 158438 . + . ID=gene-CCO53_RS19455;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=CCO53_RS19455;old_locus_tag=CCO53_19420 NZ_NPLZ01000012.1 Protein Homology CDS 154320 158438 . + 0 ID=cds-WP_094887802.1;Parent=gene-CCO53_RS19455;Dbxref=GenBank:WP_094887802.1;Name=WP_094887802.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=CCO53_RS19455;product=DNA translocase FtsK;protein_id=WP_094887802.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 158581 159192 . + . ID=gene-CCO53_RS19460;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=CCO53_RS19460;old_locus_tag=CCO53_19425 NZ_NPLZ01000012.1 Protein Homology CDS 158581 159192 . + 0 ID=cds-WP_058331330.1;Parent=gene-CCO53_RS19460;Dbxref=GenBank:WP_058331330.1;Name=WP_058331330.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=CCO53_RS19460;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_058331330.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 159202 160545 . + . ID=gene-CCO53_RS19465;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=CCO53_RS19465;old_locus_tag=CCO53_19430 NZ_NPLZ01000012.1 Protein Homology CDS 159202 160545 . + 0 ID=cds-WP_000067785.1;Parent=gene-CCO53_RS19465;Dbxref=GenBank:WP_000067785.1;Name=WP_000067785.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=CCO53_RS19465;product=replication-associated recombination protein RarA;protein_id=WP_000067785.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 160804 162096 . + . ID=gene-CCO53_RS19475;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CCO53_RS19475;old_locus_tag=CCO53_19440 NZ_NPLZ01000012.1 Protein Homology CDS 160804 162096 . + 0 ID=cds-WP_000886697.1;Parent=gene-CCO53_RS19475;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=CCO53_RS19475;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq gene 162334 164778 . + . ID=gene-CCO53_RS19480;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=CCO53_RS19480;old_locus_tag=CCO53_19445 NZ_NPLZ01000012.1 Protein Homology CDS 162334 164778 . + 0 ID=cds-WP_023203499.1;Parent=gene-CCO53_RS19480;Dbxref=GenBank:WP_023203499.1;Name=WP_023203499.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=CCO53_RS19480;product=dimethylsulfoxide reductase subunit A;protein_id=WP_023203499.1;transl_table=11 NZ_NPLZ01000012.1 RefSeq pseudogene 164789 165014 . + . ID=gene-CCO53_RS19485;Name=dmsB;end_range=165014,.;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=CCO53_RS19485;old_locus_tag=CCO53_19450;partial=true;pseudo=true NZ_NPLZ01000012.1 Protein Homology CDS 164789 165014 . + 0 ID=cds-CCO53_RS19485;Parent=gene-CCO53_RS19485;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=165014,.;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO53_RS19485;partial=true;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;pseudo=true;transl_table=11 ##sequence-region NZ_NPLZ01000013.1 1 141366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000013.1 RefSeq region 1 141366 . + . ID=NZ_NPLZ01000013.1:1..141366;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000013.1 RefSeq gene 1 110 . - . ID=gene-CCO53_RS19490;Name=CCO53_RS19490;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS19490;old_locus_tag=CCO53_19455;partial=true;start_range=.,1 NZ_NPLZ01000013.1 cmsearch rRNA 1 110 . - . ID=rna-CCO53_RS19490;Parent=gene-CCO53_RS19490;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS19490;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPLZ01000013.1 cmsearch exon 1 110 . - . ID=exon-CCO53_RS19490-1;Parent=rna-CCO53_RS19490;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS19490;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPLZ01000013.1 RefSeq gene 490 1341 . - . ID=gene-CCO53_RS19500;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CCO53_RS19500;old_locus_tag=CCO53_19465 NZ_NPLZ01000013.1 Protein Homology CDS 490 1341 . - 0 ID=cds-WP_000201805.1;Parent=gene-CCO53_RS19500;Dbxref=GenBank:WP_000201805.1;Name=WP_000201805.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=CCO53_RS19500;product=glutamate racemase;protein_id=WP_000201805.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 1286 3130 . - . ID=gene-CCO53_RS19505;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=CCO53_RS19505;old_locus_tag=CCO53_19470 NZ_NPLZ01000013.1 Protein Homology CDS 1286 3130 . - 0 ID=cds-WP_000591403.1;Parent=gene-CCO53_RS19505;Dbxref=GenBank:WP_000591403.1;Name=WP_000591403.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=CCO53_RS19505;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591403.1;transl_table=11 NZ_NPLZ01000013.1 cmsearch riboswitch 3197 3389 . - . ID=id-NZ_NPLZ01000013.1:3197..3389;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPLZ01000013.1 RefSeq gene 3504 4604 . + . ID=gene-CCO53_RS19510;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=CCO53_RS19510;old_locus_tag=CCO53_19475 NZ_NPLZ01000013.1 Protein Homology CDS 3504 4604 . + 0 ID=cds-WP_000186981.1;Parent=gene-CCO53_RS19510;Dbxref=GenBank:WP_000186981.1;Name=WP_000186981.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=CCO53_RS19510;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186981.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 4651 5010 . - . ID=gene-CCO53_RS19515;Name=CCO53_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19515;old_locus_tag=CCO53_19480 NZ_NPLZ01000013.1 Protein Homology CDS 4651 5010 . - 0 ID=cds-WP_000813838.1;Parent=gene-CCO53_RS19515;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=CCO53_RS19515;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 5026 5661 . - . ID=gene-CCO53_RS19520;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=CCO53_RS19520;old_locus_tag=CCO53_19485 NZ_NPLZ01000013.1 Protein Homology CDS 5026 5661 . - 0 ID=cds-WP_000971958.1;Parent=gene-CCO53_RS19520;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=CCO53_RS19520;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 5860 7260 . + . ID=gene-CCO53_RS19525;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO53_RS19525;old_locus_tag=CCO53_19490 NZ_NPLZ01000013.1 Protein Homology CDS 5860 7260 . + 0 ID=cds-WP_001120789.1;Parent=gene-CCO53_RS19525;Dbxref=GenBank:WP_001120789.1;Name=WP_001120789.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=CCO53_RS19525;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120789.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 7243 8160 . - . ID=gene-CCO53_RS19530;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=CCO53_RS19530;old_locus_tag=CCO53_19495 NZ_NPLZ01000013.1 Protein Homology CDS 7243 8160 . - 0 ID=cds-WP_001025919.1;Parent=gene-CCO53_RS19530;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=CCO53_RS19530;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 8445 9821 . - . ID=gene-CCO53_RS19540;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CCO53_RS19540;old_locus_tag=CCO53_19505 NZ_NPLZ01000013.1 Protein Homology CDS 8445 9821 . - 0 ID=cds-WP_023238483.1;Parent=gene-CCO53_RS19540;Dbxref=GenBank:WP_023238483.1;Name=WP_023238483.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=CCO53_RS19540;product=argininosuccinate lyase;protein_id=WP_023238483.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 9939 10715 . - . ID=gene-CCO53_RS19545;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=CCO53_RS19545;old_locus_tag=CCO53_19510 NZ_NPLZ01000013.1 Protein Homology CDS 9939 10715 . - 0 ID=cds-WP_001575262.1;Parent=gene-CCO53_RS19545;Dbxref=GenBank:WP_001575262.1;Name=WP_001575262.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=CCO53_RS19545;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 10723 11727 . - . ID=gene-CCO53_RS19550;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=CCO53_RS19550;old_locus_tag=CCO53_19515 NZ_NPLZ01000013.1 Protein Homology CDS 10723 11727 . - 0 ID=cds-WP_000935332.1;Parent=gene-CCO53_RS19550;Dbxref=GenBank:WP_000935332.1;Name=WP_000935332.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=CCO53_RS19550;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935332.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 11816 12967 . + . ID=gene-CCO53_RS19555;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=CCO53_RS19555;old_locus_tag=CCO53_19520 NZ_NPLZ01000013.1 Protein Homology CDS 11816 12967 . + 0 ID=cds-WP_000800208.1;Parent=gene-CCO53_RS19555;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=CCO53_RS19555;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 13359 16010 . + . ID=gene-CCO53_RS19565;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=CCO53_RS19565;old_locus_tag=CCO53_19525 NZ_NPLZ01000013.1 Protein Homology CDS 13359 16010 . + 0 ID=cds-WP_001005548.1;Parent=gene-CCO53_RS19565;Dbxref=GenBank:WP_001005548.1;Name=WP_001005548.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=CCO53_RS19565;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005548.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 16221 17954 . + . ID=gene-CCO53_RS19570;Name=CCO53_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19570;old_locus_tag=CCO53_19530 NZ_NPLZ01000013.1 Protein Homology CDS 16221 17954 . + 0 ID=cds-WP_001528929.1;Parent=gene-CCO53_RS19570;Dbxref=GenBank:WP_001528929.1;Name=WP_001528929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=CCO53_RS19570;product=phosphoethanolamine transferase CptA;protein_id=WP_001528929.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 18115 18951 . + . ID=gene-CCO53_RS19575;Name=CCO53_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19575;old_locus_tag=CCO53_19535 NZ_NPLZ01000013.1 Protein Homology CDS 18115 18951 . + 0 ID=cds-WP_000274595.1;Parent=gene-CCO53_RS19575;Dbxref=GenBank:WP_000274595.1;Name=WP_000274595.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=CCO53_RS19575;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274595.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 19206 19868 . + . ID=gene-CCO53_RS19580;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CCO53_RS19580;old_locus_tag=CCO53_19540 NZ_NPLZ01000013.1 Protein Homology CDS 19206 19868 . + 0 ID=cds-WP_000424866.1;Parent=gene-CCO53_RS19580;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=CCO53_RS19580;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 19880 20983 . + . ID=gene-CCO53_RS19585;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=CCO53_RS19585;old_locus_tag=CCO53_19545 NZ_NPLZ01000013.1 Protein Homology CDS 19880 20983 . + 0 ID=cds-WP_000374031.1;Parent=gene-CCO53_RS19585;Dbxref=GenBank:WP_000374031.1;Name=WP_000374031.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=CCO53_RS19585;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374031.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 21242 21865 . + . ID=gene-CCO53_RS19590;Name=CCO53_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19590;old_locus_tag=CCO53_19550 NZ_NPLZ01000013.1 Protein Homology CDS 21242 21865 . + 0 ID=cds-WP_080198304.1;Parent=gene-CCO53_RS19590;Dbxref=GenBank:WP_080198304.1;Name=WP_080198304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=CCO53_RS19590;product=DUF1287 domain-containing protein;protein_id=WP_080198304.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 21923 24103 . - . ID=gene-CCO53_RS19595;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=CCO53_RS19595;old_locus_tag=CCO53_19555 NZ_NPLZ01000013.1 Protein Homology CDS 21923 24103 . - 0 ID=cds-WP_000108103.1;Parent=gene-CCO53_RS19595;Dbxref=GenBank:WP_000108103.1;Name=WP_000108103.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=CCO53_RS19595;product=catalase/peroxidase HPI;protein_id=WP_000108103.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 24268 25158 . - . ID=gene-CCO53_RS19600;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=CCO53_RS19600;old_locus_tag=CCO53_19560 NZ_NPLZ01000013.1 Protein Homology CDS 24268 25158 . - 0 ID=cds-WP_058331576.1;Parent=gene-CCO53_RS19600;Dbxref=GenBank:WP_058331576.1;Name=WP_058331576.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=CCO53_RS19600;product=methylenetetrahydrofolate reductase;protein_id=WP_058331576.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 25353 26909 . - . ID=gene-CCO53_RS19605;Name=CCO53_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19605;old_locus_tag=CCO53_19565 NZ_NPLZ01000013.1 Protein Homology CDS 25353 26909 . - 0 ID=cds-WP_000865261.1;Parent=gene-CCO53_RS19605;Dbxref=GenBank:WP_000865261.1;Name=WP_000865261.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=CCO53_RS19605;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000865261.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 27045 28169 . + . ID=gene-CCO53_RS19610;Name=CCO53_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19610;old_locus_tag=CCO53_19570 NZ_NPLZ01000013.1 Protein Homology CDS 27045 28169 . + 0 ID=cds-WP_058331575.1;Parent=gene-CCO53_RS19610;Dbxref=GenBank:WP_058331575.1;Name=WP_058331575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=CCO53_RS19610;product=hypothetical protein;protein_id=WP_058331575.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 28404 29402 . + . ID=gene-CCO53_RS19615;Name=CCO53_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19615;old_locus_tag=CCO53_19575 NZ_NPLZ01000013.1 Protein Homology CDS 28404 29402 . + 0 ID=cds-WP_094887803.1;Parent=gene-CCO53_RS19615;Dbxref=GenBank:WP_094887803.1;Name=WP_094887803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=CCO53_RS19615;product=hypothetical protein;protein_id=WP_094887803.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 29405 30262 . + . ID=gene-CCO53_RS19620;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=CCO53_RS19620;old_locus_tag=CCO53_19580 NZ_NPLZ01000013.1 Protein Homology CDS 29405 30262 . + 0 ID=cds-WP_000398251.1;Parent=gene-CCO53_RS19620;Dbxref=GenBank:WP_000398251.1;Name=WP_000398251.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=CCO53_RS19620;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398251.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 30388 32820 . - . ID=gene-CCO53_RS19625;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=CCO53_RS19625;old_locus_tag=CCO53_19585 NZ_NPLZ01000013.1 Protein Homology CDS 30388 32820 . - 0 ID=cds-WP_000110807.1;Parent=gene-CCO53_RS19625;Dbxref=GenBank:WP_000110807.1;Name=WP_000110807.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=CCO53_RS19625;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110807.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 32823 33983 . - . ID=gene-CCO53_RS19630;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=CCO53_RS19630;old_locus_tag=CCO53_19590 NZ_NPLZ01000013.1 Protein Homology CDS 32823 33983 . - 0 ID=cds-WP_000197213.1;Parent=gene-CCO53_RS19630;Dbxref=GenBank:WP_000197213.1;Name=WP_000197213.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=CCO53_RS19630;product=cystathionine gamma-synthase;protein_id=WP_000197213.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 34248 34565 . + . ID=gene-CCO53_RS19635;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=CCO53_RS19635;old_locus_tag=CCO53_19595 NZ_NPLZ01000013.1 Protein Homology CDS 34248 34565 . + 0 ID=cds-WP_000852811.1;Parent=gene-CCO53_RS19635;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=CCO53_RS19635;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 35022 36812 . + . ID=gene-CCO53_RS19640;Name=CCO53_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19640;old_locus_tag=CCO53_19600 NZ_NPLZ01000013.1 Protein Homology CDS 35022 36812 . + 0 ID=cds-WP_080167185.1;Parent=gene-CCO53_RS19640;Dbxref=GenBank:WP_080167185.1;Name=WP_080167185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=CCO53_RS19640;product=aryl-sulfate sulfotransferase;protein_id=WP_080167185.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq pseudogene 37415 37528 . - . ID=gene-CCO53_RS24425;Name=CCO53_RS24425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24425;old_locus_tag=CCO53_19610;partial=true;pseudo=true;start_range=.,37415 NZ_NPLZ01000013.1 Protein Homology CDS 37415 37528 . - 0 ID=cds-CCO53_RS24425;Parent=gene-CCO53_RS24425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=CCO53_RS24425;partial=true;product=hypothetical protein;pseudo=true;start_range=.,37415;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 37808 38020 . - . ID=gene-CCO53_RS19655;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=CCO53_RS19655;old_locus_tag=CCO53_19615 NZ_NPLZ01000013.1 Protein Homology CDS 37808 38020 . - 0 ID=cds-WP_000715284.1;Parent=gene-CCO53_RS19655;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=CCO53_RS19655;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 38224 40422 . + . ID=gene-CCO53_RS19660;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CCO53_RS19660;old_locus_tag=CCO53_19620 NZ_NPLZ01000013.1 Protein Homology CDS 38224 40422 . + 0 ID=cds-WP_000109398.1;Parent=gene-CCO53_RS19660;Dbxref=GenBank:WP_000109398.1;Name=WP_000109398.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=CCO53_RS19660;product=primosomal protein N';protein_id=WP_000109398.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 40577 41602 . + . ID=gene-CCO53_RS19665;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=CCO53_RS19665;old_locus_tag=CCO53_19625 NZ_NPLZ01000013.1 Protein Homology CDS 40577 41602 . + 0 ID=cds-WP_000841337.1;Parent=gene-CCO53_RS19665;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=CCO53_RS19665;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 41696 42664 . + . ID=gene-CCO53_RS19670;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=CCO53_RS19670;old_locus_tag=CCO53_19630 NZ_NPLZ01000013.1 Protein Homology CDS 41696 42664 . + 0 ID=cds-WP_094887804.1;Parent=gene-CCO53_RS19670;Dbxref=GenBank:WP_094887804.1;Name=WP_094887804.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=CCO53_RS19670;product=cell division protein FtsN;protein_id=WP_094887804.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 42756 43286 . + . ID=gene-CCO53_RS19675;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CCO53_RS19675;old_locus_tag=CCO53_19635 NZ_NPLZ01000013.1 Protein Homology CDS 42756 43286 . + 0 ID=cds-WP_000208240.1;Parent=gene-CCO53_RS19675;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=CCO53_RS19675;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 43296 44627 . + . ID=gene-CCO53_RS19680;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CCO53_RS19680;old_locus_tag=CCO53_19640 NZ_NPLZ01000013.1 Protein Homology CDS 43296 44627 . + 0 ID=cds-WP_001293360.1;Parent=gene-CCO53_RS19680;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=CCO53_RS19680;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293360.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 44694 45623 . + . ID=gene-CCO53_RS19685;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=CCO53_RS19685;old_locus_tag=CCO53_19645 NZ_NPLZ01000013.1 Protein Homology CDS 44694 45623 . + 0 ID=cds-WP_000139639.1;Parent=gene-CCO53_RS19685;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=CCO53_RS19685;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 45716 46201 . + . ID=gene-CCO53_RS19690;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=CCO53_RS19690;old_locus_tag=CCO53_19650 NZ_NPLZ01000013.1 Protein Homology CDS 45716 46201 . + 0 ID=cds-WP_000872918.1;Parent=gene-CCO53_RS19690;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=CCO53_RS19690;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 46423 46662 . - . ID=gene-CCO53_RS19695;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=CCO53_RS19695;old_locus_tag=CCO53_19655 NZ_NPLZ01000013.1 Protein Homology CDS 46423 46662 . - 0 ID=cds-WP_000051370.1;Parent=gene-CCO53_RS19695;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=CCO53_RS19695;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 47061 47906 . + . ID=gene-CCO53_RS19700;Name=CCO53_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19700;old_locus_tag=CCO53_19660 NZ_NPLZ01000013.1 Protein Homology CDS 47061 47906 . + 0 ID=cds-WP_000084285.1;Parent=gene-CCO53_RS19700;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=CCO53_RS19700;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 47927 49435 . + . ID=gene-CCO53_RS19705;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CCO53_RS19705;old_locus_tag=CCO53_19665 NZ_NPLZ01000013.1 Protein Homology CDS 47927 49435 . + 0 ID=cds-WP_000136808.1;Parent=gene-CCO53_RS19705;Dbxref=GenBank:WP_000136808.1;Name=WP_000136808.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=CCO53_RS19705;product=glycerol kinase GlpK;protein_id=WP_000136808.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 49547 50557 . + . ID=gene-CCO53_RS19710;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO53_RS19710;old_locus_tag=CCO53_19670 NZ_NPLZ01000013.1 Protein Homology CDS 49547 50557 . + 0 ID=cds-WP_020838240.1;Parent=gene-CCO53_RS19710;Dbxref=GenBank:WP_020838240.1;Name=WP_020838240.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=CCO53_RS19710;product=class II fructose-bisphosphatase;protein_id=WP_020838240.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 50654 51400 . + . ID=gene-CCO53_RS19715;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=CCO53_RS19715;old_locus_tag=CCO53_19675 NZ_NPLZ01000013.1 Protein Homology CDS 50654 51400 . + 0 ID=cds-WP_023202521.1;Parent=gene-CCO53_RS19715;Dbxref=GenBank:WP_023202521.1;Name=WP_023202521.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=CCO53_RS19715;product=ferredoxin--NADP(+) reductase;protein_id=WP_023202521.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 51510 51938 . - . ID=gene-CCO53_RS19720;Name=CCO53_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19720;old_locus_tag=CCO53_19680 NZ_NPLZ01000013.1 Protein Homology CDS 51510 51938 . - 0 ID=cds-WP_000155237.1;Parent=gene-CCO53_RS19720;Dbxref=GenBank:WP_000155237.1;Name=WP_000155237.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=CCO53_RS19720;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 52039 52635 . + . ID=gene-CCO53_RS19725;Name=CCO53_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19725;old_locus_tag=CCO53_19685 NZ_NPLZ01000013.1 Protein Homology CDS 52039 52635 . + 0 ID=cds-WP_000802241.1;Parent=gene-CCO53_RS19725;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=CCO53_RS19725;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 52748 53515 . + . ID=gene-CCO53_RS19730;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CCO53_RS19730;old_locus_tag=CCO53_19690 NZ_NPLZ01000013.1 Protein Homology CDS 52748 53515 . + 0 ID=cds-WP_001216335.1;Parent=gene-CCO53_RS19730;Dbxref=GenBank:WP_001216335.1;Name=WP_001216335.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=CCO53_RS19730;product=triose-phosphate isomerase;protein_id=WP_001216335.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 53607 54371 . - . ID=gene-CCO53_RS19735;Name=CCO53_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19735;old_locus_tag=CCO53_19695 NZ_NPLZ01000013.1 Protein Homology CDS 53607 54371 . - 0 ID=cds-WP_001088047.1;Parent=gene-CCO53_RS19735;Dbxref=GenBank:WP_001088047.1;Name=WP_001088047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=CCO53_RS19735;product=epimerase;protein_id=WP_001088047.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 54381 54671 . - . ID=gene-CCO53_RS19740;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=CCO53_RS19740;old_locus_tag=CCO53_19700 NZ_NPLZ01000013.1 Protein Homology CDS 54381 54671 . - 0 ID=cds-WP_001543603.1;Parent=gene-CCO53_RS19740;Dbxref=GenBank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=CCO53_RS19740;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 54754 55629 . - . ID=gene-CCO53_RS19745;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=CCO53_RS19745;old_locus_tag=CCO53_19705 NZ_NPLZ01000013.1 Protein Homology CDS 54754 55629 . - 0 ID=cds-WP_000774150.1;Parent=gene-CCO53_RS19745;Dbxref=GenBank:WP_000774150.1;Name=WP_000774150.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=CCO53_RS19745;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774150.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 55658 56680 . - . ID=gene-CCO53_RS19750;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=CCO53_RS19750;old_locus_tag=CCO53_19710 NZ_NPLZ01000013.1 Protein Homology CDS 55658 56680 . - 0 ID=cds-WP_094887805.1;Parent=gene-CCO53_RS19750;Dbxref=GenBank:WP_094887805.1;Name=WP_094887805.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=CCO53_RS19750;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_094887805.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 56709 57710 . - . ID=gene-CCO53_RS19755;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=CCO53_RS19755;old_locus_tag=CCO53_19715 NZ_NPLZ01000013.1 Protein Homology CDS 56709 57710 . - 0 ID=cds-WP_000981826.1;Parent=gene-CCO53_RS19755;Dbxref=GenBank:WP_000981826.1;Name=WP_000981826.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=CCO53_RS19755;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_000981826.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 57707 58750 . - . ID=gene-CCO53_RS19760;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=CCO53_RS19760;old_locus_tag=CCO53_19720 NZ_NPLZ01000013.1 Protein Homology CDS 57707 58750 . - 0 ID=cds-WP_061372272.1;Parent=gene-CCO53_RS19760;Dbxref=GenBank:WP_061372272.1;Name=WP_061372272.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=CCO53_RS19760;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_061372272.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 58744 60279 . - . ID=gene-CCO53_RS19765;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=CCO53_RS19765;old_locus_tag=CCO53_19725 NZ_NPLZ01000013.1 Protein Homology CDS 58744 60279 . - 0 ID=cds-WP_001167250.1;Parent=gene-CCO53_RS19765;Dbxref=GenBank:WP_001167250.1;Name=WP_001167250.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=CCO53_RS19765;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167250.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 60535 61494 . + . ID=gene-CCO53_RS19770;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=CCO53_RS19770;old_locus_tag=CCO53_19730 NZ_NPLZ01000013.1 Protein Homology CDS 60535 61494 . + 0 ID=cds-WP_001283049.1;Parent=gene-CCO53_RS19770;Dbxref=GenBank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=CCO53_RS19770;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 61581 63173 . + . ID=gene-CCO53_RS19775;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=CCO53_RS19775;old_locus_tag=CCO53_19735 NZ_NPLZ01000013.1 Protein Homology CDS 61581 63173 . + 0 ID=cds-WP_000113084.1;Parent=gene-CCO53_RS19775;Dbxref=GenBank:WP_000113084.1;Name=WP_000113084.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=CCO53_RS19775;product=autoinducer-2 kinase;protein_id=WP_000113084.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 63187 63537 . + . ID=gene-CCO53_RS19780;Name=CCO53_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19780;old_locus_tag=CCO53_19740 NZ_NPLZ01000013.1 Protein Homology CDS 63187 63537 . + 0 ID=cds-WP_001173085.1;Parent=gene-CCO53_RS19780;Dbxref=GenBank:WP_001173085.1;Name=WP_001173085.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=CCO53_RS19780;product=cupin domain-containing protein;protein_id=WP_001173085.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq pseudogene 63627 63767 . - . ID=gene-CCO53_RS19785;Name=CCO53_RS19785;end_range=63767,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS19785;old_locus_tag=CCO53_19745;partial=true;pseudo=true NZ_NPLZ01000013.1 Protein Homology CDS 63627 63767 . - 0 ID=cds-CCO53_RS19785;Parent=gene-CCO53_RS19785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;end_range=63767,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO53_RS19785;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 NZ_NPLZ01000013.1 RefSeq pseudogene 63819 63944 . - . ID=gene-CCO53_RS19790;Name=CCO53_RS19790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS19790;old_locus_tag=CCO53_19750;partial=true;pseudo=true;start_range=.,63819 NZ_NPLZ01000013.1 Protein Homology CDS 63819 63944 . - 0 ID=cds-CCO53_RS19790;Parent=gene-CCO53_RS19790;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=CCO53_RS19790;partial=true;product=hypothetical protein;pseudo=true;start_range=.,63819;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 64042 64764 . - . ID=gene-CCO53_RS19795;Name=CCO53_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19795;old_locus_tag=CCO53_19755 NZ_NPLZ01000013.1 Protein Homology CDS 64042 64764 . - 0 ID=cds-WP_001535809.1;Parent=gene-CCO53_RS19795;Dbxref=GenBank:WP_001535809.1;Name=WP_001535809.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=CCO53_RS19795;product=GntR family transcriptional regulator;protein_id=WP_001535809.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 64827 65867 . - . ID=gene-CCO53_RS19800;Name=CCO53_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19800;old_locus_tag=CCO53_19760 NZ_NPLZ01000013.1 Protein Homology CDS 64827 65867 . - 0 ID=cds-WP_061372273.1;Parent=gene-CCO53_RS19800;Dbxref=GenBank:WP_061372273.1;Name=WP_061372273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=CCO53_RS19800;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_061372273.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 65877 66836 . - . ID=gene-CCO53_RS19805;Name=CCO53_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19805;old_locus_tag=CCO53_19765 NZ_NPLZ01000013.1 Protein Homology CDS 65877 66836 . - 0 ID=cds-WP_061372274.1;Parent=gene-CCO53_RS19805;Dbxref=GenBank:WP_061372274.1;Name=WP_061372274.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=CCO53_RS19805;product=aminoimidazole riboside kinase;protein_id=WP_061372274.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 66847 68181 . - . ID=gene-CCO53_RS19810;Name=CCO53_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19810;old_locus_tag=CCO53_19770 NZ_NPLZ01000013.1 Protein Homology CDS 66847 68181 . - 0 ID=cds-WP_000777314.1;Parent=gene-CCO53_RS19810;Dbxref=GenBank:WP_000777314.1;Name=WP_000777314.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=CCO53_RS19810;product=MFS transporter;protein_id=WP_000777314.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 68446 69201 . - . ID=gene-CCO53_RS19815;Name=CCO53_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19815;old_locus_tag=CCO53_19775 NZ_NPLZ01000013.1 Protein Homology CDS 68446 69201 . - 0 ID=cds-WP_000750756.1;Parent=gene-CCO53_RS19815;Dbxref=GenBank:WP_000750756.1;Name=WP_000750756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO53_RS19815;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750756.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 69302 70291 . - . ID=gene-CCO53_RS19820;Name=CCO53_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19820;old_locus_tag=CCO53_19780 NZ_NPLZ01000013.1 Protein Homology CDS 69302 70291 . - 0 ID=cds-WP_000758720.1;Parent=gene-CCO53_RS19820;Dbxref=GenBank:WP_000758720.1;Name=WP_000758720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=CCO53_RS19820;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758720.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 70495 71457 . - . ID=gene-CCO53_RS19825;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CCO53_RS19825;old_locus_tag=CCO53_19785 NZ_NPLZ01000013.1 Protein Homology CDS 70495 71457 . - 0 ID=cds-WP_000591793.1;Parent=gene-CCO53_RS19825;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=CCO53_RS19825;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 71642 72544 . - . ID=gene-CCO53_RS19830;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=CCO53_RS19830;old_locus_tag=CCO53_19790 NZ_NPLZ01000013.1 Protein Homology CDS 71642 72544 . - 0 ID=cds-WP_001077321.1;Parent=gene-CCO53_RS19830;Dbxref=GenBank:WP_001077321.1;Name=WP_001077321.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=CCO53_RS19830;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077321.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 72692 73192 . - . ID=gene-CCO53_RS19835;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=CCO53_RS19835;old_locus_tag=CCO53_19795 NZ_NPLZ01000013.1 Protein Homology CDS 72692 73192 . - 0 ID=cds-WP_001233463.1;Parent=gene-CCO53_RS19835;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=CCO53_RS19835;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 73343 74041 . + . ID=gene-CCO53_RS19840;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=CCO53_RS19840;old_locus_tag=CCO53_19800 NZ_NPLZ01000013.1 Protein Homology CDS 73343 74041 . + 0 ID=cds-WP_001033731.1;Parent=gene-CCO53_RS19840;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=CCO53_RS19840;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 74038 75411 . + . ID=gene-CCO53_RS19845;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=CCO53_RS19845;old_locus_tag=CCO53_19805 NZ_NPLZ01000013.1 Protein Homology CDS 74038 75411 . + 0 ID=cds-WP_000580402.1;Parent=gene-CCO53_RS19845;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=CCO53_RS19845;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 75462 75857 . - . ID=gene-CCO53_RS19850;Name=CCO53_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19850;old_locus_tag=CCO53_19810 NZ_NPLZ01000013.1 Protein Homology CDS 75462 75857 . - 0 ID=cds-WP_000133446.1;Parent=gene-CCO53_RS19850;Dbxref=GenBank:WP_000133446.1;Name=WP_000133446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=CCO53_RS19850;product=nuclear transport factor 2 family protein;protein_id=WP_000133446.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 75869 76558 . - . ID=gene-CCO53_RS19855;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=CCO53_RS19855;old_locus_tag=CCO53_19815 NZ_NPLZ01000013.1 Protein Homology CDS 75869 76558 . - 0 ID=cds-WP_000559221.1;Parent=gene-CCO53_RS19855;Dbxref=GenBank:WP_000559221.1;Name=WP_000559221.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=CCO53_RS19855;product=6-hydroxyaminopurine reductase;protein_id=WP_000559221.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 76628 77248 . - . ID=gene-CCO53_RS19860;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=CCO53_RS19860;old_locus_tag=CCO53_19820 NZ_NPLZ01000013.1 Protein Homology CDS 76628 77248 . - 0 ID=cds-WP_000122632.1;Parent=gene-CCO53_RS19860;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=CCO53_RS19860;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 77577 78560 . + . ID=gene-CCO53_RS19865;Name=CCO53_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19865;old_locus_tag=CCO53_19825 NZ_NPLZ01000013.1 Protein Homology CDS 77577 78560 . + 0 ID=cds-WP_000812816.1;Parent=gene-CCO53_RS19865;Dbxref=GenBank:WP_000812816.1;Name=WP_000812816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=CCO53_RS19865;product=TRAP transporter substrate-binding protein;protein_id=WP_000812816.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 78579 79094 . + . ID=gene-CCO53_RS19870;Name=CCO53_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19870;old_locus_tag=CCO53_19830 NZ_NPLZ01000013.1 Protein Homology CDS 78579 79094 . + 0 ID=cds-WP_001091413.1;Parent=gene-CCO53_RS19870;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=CCO53_RS19870;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 79087 80394 . + . ID=gene-CCO53_RS19875;Name=CCO53_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19875;old_locus_tag=CCO53_19835 NZ_NPLZ01000013.1 Protein Homology CDS 79087 80394 . + 0 ID=cds-WP_000566800.1;Parent=gene-CCO53_RS19875;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=CCO53_RS19875;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 80552 81235 . - . ID=gene-CCO53_RS19880;Name=CCO53_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19880;old_locus_tag=CCO53_19840 NZ_NPLZ01000013.1 Protein Homology CDS 80552 81235 . - 0 ID=cds-WP_094887806.1;Parent=gene-CCO53_RS19880;Dbxref=GenBank:WP_094887806.1;Name=WP_094887806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=CCO53_RS19880;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_094887806.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 81854 82888 . + . ID=gene-CCO53_RS19885;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=CCO53_RS19885;old_locus_tag=CCO53_19845 NZ_NPLZ01000013.1 Protein Homology CDS 81854 82888 . + 0 ID=cds-WP_000063533.1;Parent=gene-CCO53_RS19885;Dbxref=GenBank:WP_000063533.1;Name=WP_000063533.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=CCO53_RS19885;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063533.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 82885 83733 . - . ID=gene-CCO53_RS19890;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=CCO53_RS19890;old_locus_tag=CCO53_19850 NZ_NPLZ01000013.1 Protein Homology CDS 82885 83733 . - 0 ID=cds-WP_000013291.1;Parent=gene-CCO53_RS19890;Dbxref=GenBank:WP_000013291.1;Name=WP_000013291.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=CCO53_RS19890;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013291.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 83886 84722 . - . ID=gene-CCO53_RS19895;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=CCO53_RS19895;old_locus_tag=CCO53_19855 NZ_NPLZ01000013.1 Protein Homology CDS 83886 84722 . - 0 ID=cds-WP_000217112.1;Parent=gene-CCO53_RS19895;Dbxref=GenBank:WP_000217112.1;Name=WP_000217112.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=CCO53_RS19895;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217112.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 85010 86479 . + . ID=gene-CCO53_RS19900;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=CCO53_RS19900;old_locus_tag=CCO53_19860 NZ_NPLZ01000013.1 Protein Homology CDS 85010 86479 . + 0 ID=cds-WP_000143966.1;Parent=gene-CCO53_RS19900;Dbxref=GenBank:WP_000143966.1;Name=WP_000143966.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=CCO53_RS19900;product=rhamnulokinase;protein_id=WP_000143966.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 86476 87735 . + . ID=gene-CCO53_RS19905;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=CCO53_RS19905;old_locus_tag=CCO53_19865 NZ_NPLZ01000013.1 Protein Homology CDS 86476 87735 . + 0 ID=cds-WP_000211468.1;Parent=gene-CCO53_RS19905;Dbxref=GenBank:WP_000211468.1;Name=WP_000211468.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=CCO53_RS19905;product=L-rhamnose isomerase;protein_id=WP_000211468.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 87878 88705 . + . ID=gene-CCO53_RS19910;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=CCO53_RS19910;old_locus_tag=CCO53_19870 NZ_NPLZ01000013.1 Protein Homology CDS 87878 88705 . + 0 ID=cds-WP_001179685.1;Parent=gene-CCO53_RS19910;Dbxref=GenBank:WP_001179685.1;Name=WP_001179685.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=CCO53_RS19910;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179685.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 88832 89980 . + . ID=gene-CCO53_RS19915;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO53_RS19915;old_locus_tag=CCO53_19875 NZ_NPLZ01000013.1 Protein Homology CDS 88832 89980 . + 0 ID=cds-WP_000009253.1;Parent=gene-CCO53_RS19915;Dbxref=GenBank:WP_000009253.1;Name=WP_000009253.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=CCO53_RS19915;product=lactaldehyde reductase;protein_id=WP_000009253.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 89977 90291 . + . ID=gene-CCO53_RS19920;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=CCO53_RS19920;old_locus_tag=CCO53_19880 NZ_NPLZ01000013.1 Protein Homology CDS 89977 90291 . + 0 ID=cds-WP_000619478.1;Parent=gene-CCO53_RS19920;Dbxref=GenBank:WP_000619478.1;Name=WP_000619478.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=CCO53_RS19920;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 90380 90928 . - . ID=gene-CCO53_RS19925;Name=CCO53_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19925;old_locus_tag=CCO53_19885 NZ_NPLZ01000013.1 Protein Homology CDS 90380 90928 . - 0 ID=cds-WP_001517951.1;Parent=gene-CCO53_RS19925;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=CCO53_RS19925;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 91029 91688 . + . ID=gene-CCO53_RS19930;Name=CCO53_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19930;old_locus_tag=CCO53_19890 NZ_NPLZ01000013.1 Protein Homology CDS 91029 91688 . + 0 ID=cds-WP_000683586.1;Parent=gene-CCO53_RS19930;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=CCO53_RS19930;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 91688 92011 . + . ID=gene-CCO53_RS19935;Name=CCO53_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19935;old_locus_tag=CCO53_19895 NZ_NPLZ01000013.1 Protein Homology CDS 91688 92011 . + 0 ID=cds-WP_000527677.1;Parent=gene-CCO53_RS19935;Dbxref=GenBank:WP_000527677.1;Name=WP_000527677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=CCO53_RS19935;product=AzlD domain-containing protein;protein_id=WP_000527677.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 92367 93434 . - . ID=gene-CCO53_RS19940;Name=CCO53_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19940;old_locus_tag=CCO53_19900 NZ_NPLZ01000013.1 Protein Homology CDS 92367 93434 . - 0 ID=cds-WP_094887807.1;Parent=gene-CCO53_RS19940;Dbxref=GenBank:WP_094887807.1;Name=WP_094887807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=CCO53_RS19940;product=YiiG family protein;protein_id=WP_094887807.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 93627 94463 . - . ID=gene-CCO53_RS19945;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CCO53_RS19945;old_locus_tag=CCO53_19905 NZ_NPLZ01000013.1 Protein Homology CDS 93627 94463 . - 0 ID=cds-WP_058331566.1;Parent=gene-CCO53_RS19945;Dbxref=GenBank:WP_058331566.1;Name=WP_058331566.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=CCO53_RS19945;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_058331566.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 94658 97708 . + . ID=gene-CCO53_RS19955;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO53_RS19955;old_locus_tag=CCO53_19915 NZ_NPLZ01000013.1 Protein Homology CDS 94658 97708 . + 0 ID=cds-WP_077248424.1;Parent=gene-CCO53_RS19955;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=CCO53_RS19955;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:95243..95245%2Caa:Sec);transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 97721 98623 . + . ID=gene-CCO53_RS19960;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO53_RS19960;old_locus_tag=CCO53_19920 NZ_NPLZ01000013.1 Protein Homology CDS 97721 98623 . + 0 ID=cds-WP_000331361.1;Parent=gene-CCO53_RS19960;Dbxref=GenBank:WP_000331361.1;Name=WP_000331361.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=CCO53_RS19960;product=formate dehydrogenase subunit beta;protein_id=WP_000331361.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 98620 99255 . + . ID=gene-CCO53_RS19965;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=CCO53_RS19965;old_locus_tag=CCO53_19925 NZ_NPLZ01000013.1 Protein Homology CDS 98620 99255 . + 0 ID=cds-WP_000829025.1;Parent=gene-CCO53_RS19965;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=CCO53_RS19965;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 99252 100181 . + . ID=gene-CCO53_RS19970;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=CCO53_RS19970;old_locus_tag=CCO53_19930 NZ_NPLZ01000013.1 Protein Homology CDS 99252 100181 . + 0 ID=cds-WP_094887808.1;Parent=gene-CCO53_RS19970;Dbxref=GenBank:WP_094887808.1;Name=WP_094887808.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=CCO53_RS19970;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_094887808.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 100228 100518 . - . ID=gene-CCO53_RS19975;Name=CCO53_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19975;old_locus_tag=CCO53_19935 NZ_NPLZ01000013.1 Protein Homology CDS 100228 100518 . - 0 ID=cds-WP_000362050.1;Parent=gene-CCO53_RS19975;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=CCO53_RS19975;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 100519 100830 . - . ID=gene-CCO53_RS19980;Name=CCO53_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19980;old_locus_tag=CCO53_19940 NZ_NPLZ01000013.1 Protein Homology CDS 100519 100830 . - 0 ID=cds-WP_001159630.1;Parent=gene-CCO53_RS19980;Dbxref=GenBank:WP_001159630.1;Name=WP_001159630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=CCO53_RS19980;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159630.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 101048 101977 . + . ID=gene-CCO53_RS19985;Name=CCO53_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19985;old_locus_tag=CCO53_19945 NZ_NPLZ01000013.1 Protein Homology CDS 101048 101977 . + 0 ID=cds-WP_023181423.1;Parent=gene-CCO53_RS19985;Dbxref=GenBank:WP_023181423.1;Name=WP_023181423.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=CCO53_RS19985;product=alpha/beta hydrolase;protein_id=WP_023181423.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 102063 102374 . + . ID=gene-CCO53_RS19990;Name=CCO53_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19990;old_locus_tag=CCO53_19950 NZ_NPLZ01000013.1 Protein Homology CDS 102063 102374 . + 0 ID=cds-WP_000558166.1;Parent=gene-CCO53_RS19990;Dbxref=GenBank:WP_000558166.1;Name=WP_000558166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=CCO53_RS19990;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558166.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 102371 102817 . + . ID=gene-CCO53_RS19995;Name=CCO53_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS19995;old_locus_tag=CCO53_19955 NZ_NPLZ01000013.1 Protein Homology CDS 102371 102817 . + 0 ID=cds-WP_001259012.1;Parent=gene-CCO53_RS19995;Dbxref=GenBank:WP_001259012.1;Name=WP_001259012.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=CCO53_RS19995;product=helix-turn-helix domain-containing protein;protein_id=WP_001259012.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 102832 103773 . - . ID=gene-CCO53_RS20000;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=CCO53_RS20000;old_locus_tag=CCO53_19960 NZ_NPLZ01000013.1 Protein Homology CDS 102832 103773 . - 0 ID=cds-WP_001518251.1;Parent=gene-CCO53_RS20000;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=CCO53_RS20000;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 103818 104255 . - . ID=gene-CCO53_RS20005;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CCO53_RS20005;old_locus_tag=CCO53_19965 NZ_NPLZ01000013.1 Protein Homology CDS 103818 104255 . - 0 ID=cds-WP_000560969.1;Parent=gene-CCO53_RS20005;Dbxref=GenBank:WP_000560969.1;Name=WP_000560969.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=CCO53_RS20005;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560969.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 104252 105124 . - . ID=gene-CCO53_RS20010;Name=CCO53_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20010;old_locus_tag=CCO53_19970 NZ_NPLZ01000013.1 Protein Homology CDS 104252 105124 . - 0 ID=cds-WP_000921423.1;Parent=gene-CCO53_RS20010;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=CCO53_RS20010;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 105118 105717 . - . ID=gene-CCO53_RS20015;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=CCO53_RS20015;old_locus_tag=CCO53_19975 NZ_NPLZ01000013.1 Protein Homology CDS 105118 105717 . - 0 ID=cds-WP_023249109.1;Parent=gene-CCO53_RS20015;Dbxref=GenBank:WP_023249109.1;Name=WP_023249109.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=CCO53_RS20015;product=glucose-1-phosphatase;protein_id=WP_023249109.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 105908 106711 . - . ID=gene-CCO53_RS20020;Name=CCO53_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20020;old_locus_tag=CCO53_19980 NZ_NPLZ01000013.1 Protein Homology CDS 105908 106711 . - 0 ID=cds-WP_000059693.1;Parent=gene-CCO53_RS20020;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=CCO53_RS20020;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 106745 107641 . - . ID=gene-CCO53_RS20025;Name=CCO53_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20025;old_locus_tag=CCO53_19985 NZ_NPLZ01000013.1 Protein Homology CDS 106745 107641 . - 0 ID=cds-WP_001520529.1;Parent=gene-CCO53_RS20025;Dbxref=GenBank:WP_001520529.1;Name=WP_001520529.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=CCO53_RS20025;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 107806 108702 . + . ID=gene-CCO53_RS20030;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=CCO53_RS20030;old_locus_tag=CCO53_19990 NZ_NPLZ01000013.1 Protein Homology CDS 107806 108702 . + 0 ID=cds-WP_076727652.1;Parent=gene-CCO53_RS20030;Dbxref=GenBank:WP_076727652.1;Name=WP_076727652.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=CCO53_RS20030;product=sulfolactaldehyde 3-reductase;protein_id=WP_076727652.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 108725 109603 . + . ID=gene-CCO53_RS20035;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=CCO53_RS20035;old_locus_tag=CCO53_19995 NZ_NPLZ01000013.1 Protein Homology CDS 108725 109603 . + 0 ID=cds-WP_058331561.1;Parent=gene-CCO53_RS20035;Dbxref=GenBank:WP_058331561.1;Name=WP_058331561.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=CCO53_RS20035;product=sulfofructosephosphate aldolase;protein_id=WP_058331561.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 109619 110860 . + . ID=gene-CCO53_RS20040;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=CCO53_RS20040;old_locus_tag=CCO53_20000 NZ_NPLZ01000013.1 Protein Homology CDS 109619 110860 . + 0 ID=cds-WP_000870942.1;Parent=gene-CCO53_RS20040;Dbxref=GenBank:WP_000870942.1;Name=WP_000870942.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=CCO53_RS20040;product=sulfoquinovose isomerase;protein_id=WP_000870942.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 110864 111721 . + . ID=gene-CCO53_RS20045;Name=CCO53_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20045;old_locus_tag=CCO53_20005 NZ_NPLZ01000013.1 Protein Homology CDS 110864 111721 . + 0 ID=cds-WP_079981717.1;Parent=gene-CCO53_RS20045;Dbxref=GenBank:WP_079981717.1;Name=WP_079981717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=CCO53_RS20045;product=aldose-1-epimerase;protein_id=WP_079981717.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 111765 113801 . + . ID=gene-CCO53_RS20050;Name=CCO53_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20050;old_locus_tag=CCO53_20010 NZ_NPLZ01000013.1 Protein Homology CDS 111765 113801 . + 0 ID=cds-WP_094887809.1;Parent=gene-CCO53_RS20050;Dbxref=GenBank:WP_094887809.1;Name=WP_094887809.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=CCO53_RS20050;product=alpha-glucosidase;protein_id=WP_094887809.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 113847 115229 . + . ID=gene-CCO53_RS20055;Name=CCO53_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20055;old_locus_tag=CCO53_20015 NZ_NPLZ01000013.1 Protein Homology CDS 113847 115229 . + 0 ID=cds-WP_000084251.1;Parent=gene-CCO53_RS20055;Dbxref=GenBank:WP_000084251.1;Name=WP_000084251.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=CCO53_RS20055;product=MFS transporter;protein_id=WP_000084251.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 115275 116696 . + . ID=gene-CCO53_RS20060;Name=CCO53_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20060;old_locus_tag=CCO53_20020 NZ_NPLZ01000013.1 Protein Homology CDS 115275 116696 . + 0 ID=cds-WP_000064888.1;Parent=gene-CCO53_RS20060;Dbxref=GenBank:WP_000064888.1;Name=WP_000064888.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=CCO53_RS20060;product=MFS transporter;protein_id=WP_000064888.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 116764 117456 . + . ID=gene-CCO53_RS20065;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=CCO53_RS20065;old_locus_tag=CCO53_20025 NZ_NPLZ01000013.1 Protein Homology CDS 116764 117456 . + 0 ID=cds-WP_000838828.1;Parent=gene-CCO53_RS20065;Dbxref=GenBank:WP_000838828.1;Name=WP_000838828.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=CCO53_RS20065;product=porin OmpL;protein_id=WP_000838828.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 117613 118461 . + . ID=gene-CCO53_RS20070;Name=CCO53_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20070;old_locus_tag=CCO53_20030 NZ_NPLZ01000013.1 Protein Homology CDS 117613 118461 . + 0 ID=cds-WP_001042093.1;Parent=gene-CCO53_RS20070;Dbxref=GenBank:WP_001042093.1;Name=WP_001042093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=CCO53_RS20070;product=STM4015 family protein;protein_id=WP_001042093.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 118474 119499 . + . ID=gene-CCO53_RS20075;Name=CCO53_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20075;old_locus_tag=CCO53_20035 NZ_NPLZ01000013.1 Protein Homology CDS 118474 119499 . + 0 ID=cds-WP_080160287.1;Parent=gene-CCO53_RS20075;Dbxref=GenBank:WP_080160287.1;Name=WP_080160287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=CCO53_RS20075;product=STM4014 family protein;protein_id=WP_080160287.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 119492 120367 . + . ID=gene-CCO53_RS20080;Name=CCO53_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20080;old_locus_tag=CCO53_20040 NZ_NPLZ01000013.1 Protein Homology CDS 119492 120367 . + 0 ID=cds-WP_000282795.1;Parent=gene-CCO53_RS20080;Dbxref=GenBank:WP_000282795.1;Name=WP_000282795.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=CCO53_RS20080;product=STM4013/SEN3800 family hydrolase;protein_id=WP_000282795.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 120369 121610 . + . ID=gene-CCO53_RS20085;Name=CCO53_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20085;old_locus_tag=CCO53_20045 NZ_NPLZ01000013.1 Protein Homology CDS 120369 121610 . + 0 ID=cds-WP_080160288.1;Parent=gene-CCO53_RS20085;Dbxref=GenBank:WP_080160288.1;Name=WP_080160288.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=CCO53_RS20085;product=STM4012 family radical SAM protein;protein_id=WP_080160288.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 121607 122485 . + . ID=gene-CCO53_RS20090;Name=CCO53_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20090;old_locus_tag=CCO53_20050 NZ_NPLZ01000013.1 Protein Homology CDS 121607 122485 . + 0 ID=cds-WP_023206313.1;Parent=gene-CCO53_RS20090;Dbxref=GenBank:WP_023206313.1;Name=WP_023206313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=CCO53_RS20090;product=STM4011 family radical SAM protein;protein_id=WP_023206313.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 122470 123204 . + . ID=gene-CCO53_RS20095;Name=CCO53_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20095;old_locus_tag=CCO53_20055 NZ_NPLZ01000013.1 Protein Homology CDS 122470 123204 . + 0 ID=cds-WP_058331556.1;Parent=gene-CCO53_RS20095;Dbxref=GenBank:WP_058331556.1;Name=WP_058331556.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=CCO53_RS20095;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_058331556.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 123259 125082 . - . ID=gene-CCO53_RS20100;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CCO53_RS20100;old_locus_tag=CCO53_20060 NZ_NPLZ01000013.1 Protein Homology CDS 123259 125082 . - 0 ID=cds-WP_000572060.1;Parent=gene-CCO53_RS20100;Dbxref=GenBank:WP_000572060.1;Name=WP_000572060.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=CCO53_RS20100;product=ribosome-dependent GTPase TypA;protein_id=WP_000572060.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 125458 126867 . + . ID=gene-CCO53_RS20110;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CCO53_RS20110;old_locus_tag=CCO53_20070 NZ_NPLZ01000013.1 Protein Homology CDS 125458 126867 . + 0 ID=cds-WP_001271699.1;Parent=gene-CCO53_RS20110;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=CCO53_RS20110;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 127142 128191 . + . ID=gene-CCO53_RS20125;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=CCO53_RS20125;old_locus_tag=CCO53_20085 NZ_NPLZ01000013.1 Protein Homology CDS 127142 128191 . + 0 ID=cds-WP_000146190.1;Parent=gene-CCO53_RS20125;Dbxref=GenBank:WP_000146190.1;Name=WP_000146190.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=CCO53_RS20125;product=nitrogen regulation protein NR(II);protein_id=WP_000146190.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 128200 129609 . + . ID=gene-CCO53_RS20130;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=CCO53_RS20130;old_locus_tag=CCO53_20090 NZ_NPLZ01000013.1 Protein Homology CDS 128200 129609 . + 0 ID=cds-WP_001188782.1;Parent=gene-CCO53_RS20130;Dbxref=GenBank:WP_001188782.1;Name=WP_001188782.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=CCO53_RS20130;product=nitrogen regulation protein NR(I);protein_id=WP_001188782.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 129722 129832 . + . ID=gene-CCO53_RS20135;Name=CCO53_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20135;old_locus_tag=CCO53_20095 NZ_NPLZ01000013.1 Protein Homology CDS 129722 129832 . + 0 ID=cds-WP_001578131.1;Parent=gene-CCO53_RS20135;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=CCO53_RS20135;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 129922 131295 . - . ID=gene-CCO53_RS20140;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=CCO53_RS20140;old_locus_tag=CCO53_20100 NZ_NPLZ01000013.1 Protein Homology CDS 129922 131295 . - 0 ID=cds-WP_001728062.1;Parent=gene-CCO53_RS20140;Dbxref=GenBank:WP_001728062.1;Name=WP_001728062.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=CCO53_RS20140;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_001728062.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 131484 131999 . - . ID=gene-CCO53_RS20145;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=CCO53_RS20145;old_locus_tag=CCO53_20105 NZ_NPLZ01000013.1 Protein Homology CDS 131484 131999 . - 0 ID=cds-WP_094887810.1;Parent=gene-CCO53_RS20145;Dbxref=GenBank:WP_094887810.1;Name=WP_094887810.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=CCO53_RS20145;product=Der GTPase-activating protein YihI;protein_id=WP_094887810.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 132118 132342 . - . ID=gene-CCO53_RS20150;Name=CCO53_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20150;old_locus_tag=CCO53_20110 NZ_NPLZ01000013.1 Protein Homology CDS 132118 132342 . - 0 ID=cds-WP_001541209.1;Parent=gene-CCO53_RS20150;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=CCO53_RS20150;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 132582 133214 . + . ID=gene-CCO53_RS20155;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CCO53_RS20155;old_locus_tag=CCO53_20115 NZ_NPLZ01000013.1 Protein Homology CDS 132582 133214 . + 0 ID=cds-WP_000183331.1;Parent=gene-CCO53_RS20155;Dbxref=GenBank:WP_000183331.1;Name=WP_000183331.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=CCO53_RS20155;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183331.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 133549 136335 . - . ID=gene-CCO53_RS20160;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CCO53_RS20160;old_locus_tag=CCO53_20120 NZ_NPLZ01000013.1 Protein Homology CDS 133549 136335 . - 0 ID=cds-WP_094887811.1;Parent=gene-CCO53_RS20160;Dbxref=GenBank:WP_094887811.1;Name=WP_094887811.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=CCO53_RS20160;product=DNA polymerase I;protein_id=WP_094887811.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 136723 137631 . + . ID=gene-CCO53_RS20170;Name=CCO53_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20170;old_locus_tag=CCO53_20130 NZ_NPLZ01000013.1 Protein Homology CDS 136723 137631 . + 0 ID=cds-WP_000196890.1;Parent=gene-CCO53_RS20170;Dbxref=GenBank:WP_000196890.1;Name=WP_000196890.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=CCO53_RS20170;product=acyltransferase;protein_id=WP_000196890.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 137644 138267 . - . ID=gene-CCO53_RS20175;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=CCO53_RS20175;old_locus_tag=CCO53_20135 NZ_NPLZ01000013.1 Protein Homology CDS 137644 138267 . - 0 ID=cds-WP_000725364.1;Parent=gene-CCO53_RS20175;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=CCO53_RS20175;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 138284 139270 . - . ID=gene-CCO53_RS20180;Name=CCO53_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20180;old_locus_tag=CCO53_20140 NZ_NPLZ01000013.1 Protein Homology CDS 138284 139270 . - 0 ID=cds-WP_000999260.1;Parent=gene-CCO53_RS20180;Dbxref=GenBank:WP_000999260.1;Name=WP_000999260.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=CCO53_RS20180;product=serine/threonine protein kinase;protein_id=WP_000999260.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 139347 139616 . - . ID=gene-CCO53_RS20185;Name=CCO53_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20185;old_locus_tag=CCO53_20145 NZ_NPLZ01000013.1 Protein Homology CDS 139347 139616 . - 0 ID=cds-WP_000649858.1;Parent=gene-CCO53_RS20185;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=CCO53_RS20185;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 139686 140270 . + . ID=gene-CCO53_RS20190;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CCO53_RS20190;old_locus_tag=CCO53_20150 NZ_NPLZ01000013.1 Protein Homology CDS 139686 140270 . + 0 ID=cds-WP_058331553.1;Parent=gene-CCO53_RS20190;Dbxref=GenBank:WP_058331553.1;Name=WP_058331553.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=CCO53_RS20190;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_058331553.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 140267 140782 . + . ID=gene-CCO53_RS20195;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CCO53_RS20195;old_locus_tag=CCO53_20155 NZ_NPLZ01000013.1 Protein Homology CDS 140267 140782 . + 0 ID=cds-WP_010989085.1;Parent=gene-CCO53_RS20195;Dbxref=GenBank:WP_010989085.1;Name=WP_010989085.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=CCO53_RS20195;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_010989085.1;transl_table=11 NZ_NPLZ01000013.1 RefSeq gene 141085 141200 . - . ID=gene-CCO53_RS20200;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO53_RS20200;old_locus_tag=CCO53_20160 NZ_NPLZ01000013.1 cmsearch rRNA 141085 141200 . - . ID=rna-CCO53_RS20200;Parent=gene-CCO53_RS20200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS20200;product=5S ribosomal RNA NZ_NPLZ01000013.1 cmsearch exon 141085 141200 . - . ID=exon-CCO53_RS20200-1;Parent=rna-CCO53_RS20200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS20200;product=5S ribosomal RNA NZ_NPLZ01000013.1 RefSeq gene 141294 141366 . - . ID=gene-CCO53_RS20205;Name=CCO53_RS20205;end_range=141366,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS20205;old_locus_tag=CCO53_20165;partial=true NZ_NPLZ01000013.1 cmsearch rRNA 141294 141366 . - . ID=rna-CCO53_RS20205;Parent=gene-CCO53_RS20205;Dbxref=RFAM:RF02541;end_range=141366,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS20205;partial=true;product=23S ribosomal RNA NZ_NPLZ01000013.1 cmsearch exon 141294 141366 . - . ID=exon-CCO53_RS20205-1;Parent=rna-CCO53_RS20205;Dbxref=RFAM:RF02541;end_range=141366,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS20205;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPLZ01000014.1 1 134169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000014.1 RefSeq region 1 134169 . + . ID=NZ_NPLZ01000014.1:1..134169;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000014.1 RefSeq gene 1 1394 . + . ID=gene-CCO53_RS20210;Name=CCO53_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20210;old_locus_tag=CCO53_20170;partial=true;start_range=.,1 NZ_NPLZ01000014.1 Protein Homology CDS 1 1394 . + 2 ID=cds-WP_140428409.1;Parent=gene-CCO53_RS20210;Dbxref=GenBank:WP_140428409.1;Name=WP_140428409.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=CCO53_RS20210;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_140428409.1;start_range=.,1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 1418 1864 . + . ID=gene-CCO53_RS20215;Name=CCO53_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20215;old_locus_tag=CCO53_20175 NZ_NPLZ01000014.1 Protein Homology CDS 1418 1864 . + 0 ID=cds-WP_061371988.1;Parent=gene-CCO53_RS20215;Dbxref=GenBank:WP_061371988.1;Name=WP_061371988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459288.1;locus_tag=CCO53_RS20215;product=DcrB-related protein;protein_id=WP_061371988.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 1883 5959 . + . ID=gene-CCO53_RS20220;Name=CCO53_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20220;old_locus_tag=CCO53_20180 NZ_NPLZ01000014.1 Protein Homology CDS 1883 5959 . + 0 ID=cds-WP_094887812.1;Parent=gene-CCO53_RS20220;Dbxref=GenBank:WP_094887812.1;Name=WP_094887812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272645.1;locus_tag=CCO53_RS20220;product=RHS repeat-associated core domain-containing protein;protein_id=WP_094887812.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 5959 6396 . + . ID=gene-CCO53_RS20225;Name=CCO53_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20225;old_locus_tag=CCO53_20185 NZ_NPLZ01000014.1 Protein Homology CDS 5959 6396 . + 0 ID=cds-WP_001751019.1;Parent=gene-CCO53_RS20225;Dbxref=GenBank:WP_001751019.1;Name=WP_001751019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870136.1;locus_tag=CCO53_RS20225;product=hypothetical protein;protein_id=WP_001751019.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 6515 7131 . + . ID=gene-CCO53_RS23740;Name=CCO53_RS23740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23740;partial=true;pseudo=true;start_range=.,6515 NZ_NPLZ01000014.1 Protein Homology CDS 6515 7131 . + 0 ID=cds-CCO53_RS23740;Parent=gene-CCO53_RS23740;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272652.1;locus_tag=CCO53_RS23740;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,6515;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 7141 7986 . + . ID=gene-CCO53_RS20235;Name=CCO53_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20235;old_locus_tag=CCO53_20195 NZ_NPLZ01000014.1 Protein Homology CDS 7141 7986 . + 0 ID=cds-WP_001084940.1;Parent=gene-CCO53_RS20235;Dbxref=GenBank:WP_001084940.1;Name=WP_001084940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001084940.1;locus_tag=CCO53_RS20235;product=hypothetical protein;protein_id=WP_001084940.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 8128 8382 . + . ID=gene-CCO53_RS24430;Name=CCO53_RS24430;end_range=8382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24430;partial=true;pseudo=true;start_range=.,8128 NZ_NPLZ01000014.1 Protein Homology CDS 8128 8382 . + 0 ID=cds-CCO53_RS24430;Parent=gene-CCO53_RS24430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=8382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO53_RS24430;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,8128;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 8697 9116 . + . ID=gene-CCO53_RS20245;Name=CCO53_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20245;old_locus_tag=CCO53_20205 NZ_NPLZ01000014.1 GeneMarkS-2+ CDS 8697 9116 . + 0 ID=cds-WP_057521536.1;Parent=gene-CCO53_RS20245;Dbxref=GenBank:WP_057521536.1;Name=WP_057521536.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS20245;product=hypothetical protein;protein_id=WP_057521536.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 9158 9527 . + . ID=gene-CCO53_RS20250;Name=CCO53_RS20250;end_range=9527,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS20250;old_locus_tag=CCO53_20210;partial=true;pseudo=true;start_range=.,9158 NZ_NPLZ01000014.1 Protein Homology CDS 9158 9527 . + 0 ID=cds-CCO53_RS20250;Parent=gene-CCO53_RS20250;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=9527,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO53_RS20250;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9158;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 9559 10026 . + . ID=gene-CCO53_RS20255;Name=imm9;gbkey=Gene;gene=imm9;gene_biotype=protein_coding;locus_tag=CCO53_RS20255;old_locus_tag=CCO53_20215 NZ_NPLZ01000014.1 Protein Homology CDS 9559 10026 . + 0 ID=cds-WP_000343595.1;Parent=gene-CCO53_RS20255;Dbxref=GenBank:WP_000343595.1;Name=WP_000343595.1;gbkey=CDS;gene=imm9;inference=COORDINATES: protein motif:HMM:NF026925.6;locus_tag=CCO53_RS20255;product=Imm9 family immunity protein;protein_id=WP_000343595.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 10164 10454 . - . ID=gene-CCO53_RS20260;Name=CCO53_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20260;old_locus_tag=CCO53_20220 NZ_NPLZ01000014.1 Protein Homology CDS 10164 10454 . - 0 ID=cds-WP_015632802.1;Parent=gene-CCO53_RS20260;Dbxref=GenBank:WP_015632802.1;Name=WP_015632802.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=CCO53_RS20260;product=SymE family type I addiction module toxin;protein_id=WP_015632802.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 10445 13300 . + . ID=gene-CCO53_RS20265;Name=CCO53_RS20265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS20265;old_locus_tag=CCO53_20225;partial=true;pseudo=true;start_range=.,10445 NZ_NPLZ01000014.1 Protein Homology CDS 10445 13300 . + 0 ID=cds-CCO53_RS20265;Parent=gene-CCO53_RS20265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503215.1;locus_tag=CCO53_RS20265;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,10445;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 13302 13733 . + . ID=gene-CCO53_RS23850;Name=CCO53_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23850 NZ_NPLZ01000014.1 Protein Homology CDS 13302 13733 . + 0 ID=cds-WP_176456356.1;Parent=gene-CCO53_RS23850;Dbxref=GenBank:WP_176456356.1;Name=WP_176456356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778606.1;locus_tag=CCO53_RS23850;product=hypothetical protein;protein_id=WP_176456356.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 13800 14045 . - . ID=gene-CCO53_RS20275;Name=CCO53_RS20275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS20275;old_locus_tag=CCO53_20235;pseudo=true NZ_NPLZ01000014.1 Protein Homology CDS 13800 14045 . - 0 ID=cds-CCO53_RS20275;Parent=gene-CCO53_RS20275;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=CCO53_RS20275;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 14182 14354 . + . ID=gene-CCO53_RS24435;Name=CCO53_RS24435;end_range=14354,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24435;partial=true;pseudo=true;start_range=.,14182 NZ_NPLZ01000014.1 Protein Homology CDS 14182 14354 . + 0 ID=cds-CCO53_RS24435;Parent=gene-CCO53_RS24435;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=14354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO53_RS24435;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,14182;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 14379 14612 . + . ID=gene-CCO53_RS23745;Name=CCO53_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23745 NZ_NPLZ01000014.1 GeneMarkS-2+ CDS 14379 14612 . + 0 ID=cds-WP_124084119.1;Parent=gene-CCO53_RS23745;Dbxref=GenBank:WP_124084119.1;Name=WP_124084119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS23745;product=hypothetical protein;protein_id=WP_124084119.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 15484 15951 . + . ID=gene-CCO53_RS20290;Name=CCO53_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20290;old_locus_tag=CCO53_20250 NZ_NPLZ01000014.1 Protein Homology CDS 15484 15951 . + 0 ID=cds-WP_063809038.1;Parent=gene-CCO53_RS20290;Dbxref=GenBank:WP_063809038.1;Name=WP_063809038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=CCO53_RS20290;product=hypothetical protein;protein_id=WP_063809038.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 15981 16138 . + . ID=gene-CCO53_RS24440;Name=CCO53_RS24440;end_range=16138,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24440;old_locus_tag=CCO53_20255;partial=true;pseudo=true;start_range=.,15981 NZ_NPLZ01000014.1 Protein Homology CDS 15981 16138 . + 0 ID=cds-CCO53_RS24440;Parent=gene-CCO53_RS24440;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=16138,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=CCO53_RS24440;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,15981;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 16269 16547 . + . ID=gene-CCO53_RS20300;Name=CCO53_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20300;old_locus_tag=CCO53_20260 NZ_NPLZ01000014.1 Protein Homology CDS 16269 16547 . + 0 ID=cds-WP_077944729.1;Parent=gene-CCO53_RS20300;Dbxref=GenBank:WP_077944729.1;Name=WP_077944729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=CCO53_RS20300;product=hypothetical protein;protein_id=WP_077944729.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 16679 16927 . - . ID=gene-CCO53_RS20305;Name=CCO53_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20305;old_locus_tag=CCO53_20265 NZ_NPLZ01000014.1 Protein Homology CDS 16679 16927 . - 0 ID=cds-WP_001738030.1;Parent=gene-CCO53_RS20305;Dbxref=GenBank:WP_001738030.1;Name=WP_001738030.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446753.1;locus_tag=CCO53_RS20305;product=SymE family type I addiction module toxin;protein_id=WP_001738030.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 17019 17177 . + . ID=gene-CCO53_RS24445;Name=CCO53_RS24445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24445 NZ_NPLZ01000014.1 Protein Homology CDS 17019 17177 . + 0 ID=cds-WP_217805114.1;Parent=gene-CCO53_RS24445;Dbxref=GenBank:WP_217805114.1;Name=WP_217805114.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=CCO53_RS24445;product=transposase;protein_id=WP_217805114.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 17111 17681 . + . ID=gene-CCO53_RS20310;Name=CCO53_RS20310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS20310;old_locus_tag=CCO53_20270;partial=true;pseudo=true;start_range=.,17111 NZ_NPLZ01000014.1 Protein Homology CDS 17111 17681 . + 0 ID=cds-CCO53_RS20310;Parent=gene-CCO53_RS20310;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=CCO53_RS20310;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,17111;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 18445 18942 . + . ID=gene-CCO53_RS20315;Name=CCO53_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20315;old_locus_tag=CCO53_20275 NZ_NPLZ01000014.1 Protein Homology CDS 18445 18942 . + 0 ID=cds-WP_094882795.1;Parent=gene-CCO53_RS20315;Dbxref=GenBank:WP_094882795.1;Name=WP_094882795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=CCO53_RS20315;product=Saf-pilin pilus formation protein SafA;protein_id=WP_094882795.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 19017 19757 . + . ID=gene-CCO53_RS20320;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=CCO53_RS20320;old_locus_tag=CCO53_20280 NZ_NPLZ01000014.1 Protein Homology CDS 19017 19757 . + 0 ID=cds-WP_024792644.1;Parent=gene-CCO53_RS20320;Dbxref=GenBank:WP_024792644.1;Name=WP_024792644.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=CCO53_RS20320;product=pili assembly chaperone SafB;protein_id=WP_024792644.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 19781 22291 . + . ID=gene-CCO53_RS20325;Name=CCO53_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20325;old_locus_tag=CCO53_20285 NZ_NPLZ01000014.1 Protein Homology CDS 19781 22291 . + 0 ID=cds-WP_094887814.1;Parent=gene-CCO53_RS20325;Dbxref=GenBank:WP_094887814.1;Name=WP_094887814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=CCO53_RS20325;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_094887814.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 22313 22783 . + . ID=gene-CCO53_RS20330;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=CCO53_RS20330;old_locus_tag=CCO53_20290 NZ_NPLZ01000014.1 Protein Homology CDS 22313 22783 . + 0 ID=cds-WP_023263009.1;Parent=gene-CCO53_RS20330;Dbxref=GenBank:WP_023263009.1;Name=WP_023263009.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266935.1;locus_tag=CCO53_RS20330;product=AfaD family invasin;protein_id=WP_023263009.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 23190 24011 . + . ID=gene-CCO53_RS20335;Name=CCO53_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20335;old_locus_tag=CCO53_20295 NZ_NPLZ01000014.1 Protein Homology CDS 23190 24011 . + 0 ID=cds-WP_058331263.1;Parent=gene-CCO53_RS20335;Dbxref=GenBank:WP_058331263.1;Name=WP_058331263.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=CCO53_RS20335;product=polysaccharide deacetylase family protein;protein_id=WP_058331263.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 24094 24331 . + . ID=gene-CCO53_RS20340;Name=CCO53_RS20340;end_range=24331,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS20340;old_locus_tag=CCO53_20300;partial=true;pseudo=true NZ_NPLZ01000014.1 Protein Homology CDS 24094 24331 . + 0 ID=cds-CCO53_RS20340;Parent=gene-CCO53_RS20340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=24331,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=CCO53_RS20340;partial=true;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 24828 25775 . + . ID=gene-CCO53_RS20345;Name=CCO53_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20345;old_locus_tag=CCO53_20305 NZ_NPLZ01000014.1 Protein Homology CDS 24828 25775 . + 0 ID=cds-WP_058331264.1;Parent=gene-CCO53_RS20345;Dbxref=GenBank:WP_058331264.1;Name=WP_058331264.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=CCO53_RS20345;product=LysR family transcriptional regulator;protein_id=WP_058331264.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 25895 26110 . + . ID=gene-CCO53_RS20350;Name=CCO53_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20350;old_locus_tag=CCO53_20310 NZ_NPLZ01000014.1 Protein Homology CDS 25895 26110 . + 0 ID=cds-WP_058331265.1;Parent=gene-CCO53_RS20350;Dbxref=GenBank:WP_058331265.1;Name=WP_058331265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=CCO53_RS20350;product=hypothetical protein;protein_id=WP_058331265.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 26114 26833 . - . ID=gene-CCO53_RS20355;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=CCO53_RS20355;old_locus_tag=CCO53_20315 NZ_NPLZ01000014.1 Protein Homology CDS 26114 26833 . - 0 ID=cds-WP_000787602.1;Parent=gene-CCO53_RS20355;Dbxref=GenBank:WP_000787602.1;Name=WP_000787602.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=CCO53_RS20355;product=adhesin/invasin protein PagN;protein_id=WP_000787602.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 27173 27580 . - . ID=gene-CCO53_RS20360;Name=CCO53_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20360;old_locus_tag=CCO53_20320 NZ_NPLZ01000014.1 Protein Homology CDS 27173 27580 . - 0 ID=cds-WP_000788200.1;Parent=gene-CCO53_RS20360;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=CCO53_RS20360;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 27890 28657 . - . ID=gene-CCO53_RS20365;Name=CCO53_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20365;old_locus_tag=CCO53_20325 NZ_NPLZ01000014.1 Protein Homology CDS 27890 28657 . - 0 ID=cds-WP_094887815.1;Parent=gene-CCO53_RS20365;Dbxref=GenBank:WP_094887815.1;Name=WP_094887815.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=CCO53_RS20365;product=amidohydrolase;protein_id=WP_094887815.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 28766 31210 . - . ID=gene-CCO53_RS20370;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CCO53_RS20370;old_locus_tag=CCO53_20330 NZ_NPLZ01000014.1 Protein Homology CDS 28766 31210 . - 0 ID=cds-WP_000973041.1;Parent=gene-CCO53_RS20370;Dbxref=GenBank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=CCO53_RS20370;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 31450 32028 . + . ID=gene-CCO53_RS20375;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=CCO53_RS20375;old_locus_tag=CCO53_20335 NZ_NPLZ01000014.1 Protein Homology CDS 31450 32028 . + 0 ID=cds-WP_094887816.1;Parent=gene-CCO53_RS20375;Dbxref=GenBank:WP_094887816.1;Name=WP_094887816.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=CCO53_RS20375;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_094887816.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 32192 32959 . + . ID=gene-CCO53_RS20380;Name=CCO53_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20380;old_locus_tag=CCO53_20340 NZ_NPLZ01000014.1 Protein Homology CDS 32192 32959 . + 0 ID=cds-WP_000333387.1;Parent=gene-CCO53_RS20380;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=CCO53_RS20380;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 32930 33670 . - . ID=gene-CCO53_RS20385;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=CCO53_RS20385;old_locus_tag=CCO53_20345 NZ_NPLZ01000014.1 Protein Homology CDS 32930 33670 . - 0 ID=cds-WP_001225658.1;Parent=gene-CCO53_RS20385;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=CCO53_RS20385;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 33920 34975 . + . ID=gene-CCO53_RS20390;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CCO53_RS20390;old_locus_tag=CCO53_20350 NZ_NPLZ01000014.1 Protein Homology CDS 33920 34975 . + 0 ID=cds-WP_001226205.1;Parent=gene-CCO53_RS20390;Dbxref=GenBank:WP_001226205.1;Name=WP_001226205.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=CCO53_RS20390;product=DNA polymerase IV;protein_id=WP_001226205.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 35194 36333 . + . ID=gene-CCO53_RS20395;Name=CCO53_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20395;old_locus_tag=CCO53_20355 NZ_NPLZ01000014.1 Protein Homology CDS 35194 36333 . + 0 ID=cds-WP_000528901.1;Parent=gene-CCO53_RS20395;Dbxref=GenBank:WP_000528901.1;Name=WP_000528901.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=CCO53_RS20395;product=RNA ligase RtcB family protein;protein_id=WP_000528901.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 36330 36944 . + . ID=gene-CCO53_RS20400;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=CCO53_RS20400;old_locus_tag=CCO53_20360 NZ_NPLZ01000014.1 Protein Homology CDS 36330 36944 . + 0 ID=cds-WP_000602086.1;Parent=gene-CCO53_RS20400;Dbxref=GenBank:WP_000602086.1;Name=WP_000602086.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=CCO53_RS20400;product=peptide chain release factor H;protein_id=WP_000602086.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 37100 38557 . - . ID=gene-CCO53_RS20405;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=CCO53_RS20405;old_locus_tag=CCO53_20365 NZ_NPLZ01000014.1 Protein Homology CDS 37100 38557 . - 0 ID=cds-WP_001292977.1;Parent=gene-CCO53_RS20405;Dbxref=GenBank:WP_001292977.1;Name=WP_001292977.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=CCO53_RS20405;product=cytosol nonspecific dipeptidase;protein_id=WP_001292977.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 38806 39264 . + . ID=gene-CCO53_RS20410;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=CCO53_RS20410;old_locus_tag=CCO53_20370 NZ_NPLZ01000014.1 Protein Homology CDS 38806 39264 . + 0 ID=cds-WP_001292018.1;Parent=gene-CCO53_RS20410;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=CCO53_RS20410;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 39353 40597 . + . ID=gene-CCO53_RS20415;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=CCO53_RS20415;old_locus_tag=CCO53_20375 NZ_NPLZ01000014.1 Protein Homology CDS 39353 40597 . + 0 ID=cds-WP_001728791.1;Parent=gene-CCO53_RS20415;Dbxref=GenBank:WP_001728791.1;Name=WP_001728791.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=CCO53_RS20415;product=esterase FrsA;protein_id=WP_001728791.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 40655 41056 . + . ID=gene-CCO53_RS20420;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=CCO53_RS20420;old_locus_tag=CCO53_20380 NZ_NPLZ01000014.1 Protein Homology CDS 40655 41056 . + 0 ID=cds-WP_000174693.1;Parent=gene-CCO53_RS20420;Dbxref=GenBank:WP_000174693.1;Name=WP_000174693.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=CCO53_RS20420;product=sigma factor-binding protein Crl;protein_id=WP_000174693.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 41107 42159 . - . ID=gene-CCO53_RS20425;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=CCO53_RS20425;old_locus_tag=CCO53_20385 NZ_NPLZ01000014.1 Protein Homology CDS 41107 42159 . - 0 ID=cds-WP_001043673.1;Parent=gene-CCO53_RS20425;Dbxref=GenBank:WP_001043673.1;Name=WP_001043673.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=CCO53_RS20425;product=phosphoporin PhoE;protein_id=WP_001043673.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 42442 43545 . + . ID=gene-CCO53_RS20430;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=CCO53_RS20430;old_locus_tag=CCO53_20390 NZ_NPLZ01000014.1 Protein Homology CDS 42442 43545 . + 0 ID=cds-WP_001285275.1;Parent=gene-CCO53_RS20430;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=CCO53_RS20430;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 43557 44807 . + . ID=gene-CCO53_RS20435;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=CCO53_RS20435;old_locus_tag=CCO53_20395 NZ_NPLZ01000014.1 Protein Homology CDS 43557 44807 . + 0 ID=cds-WP_094887817.1;Parent=gene-CCO53_RS20435;Dbxref=GenBank:WP_094887817.1;Name=WP_094887817.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=CCO53_RS20435;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_094887817.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 44923 44998 . + . ID=gene-CCO53_RS20440;Name=CCO53_RS20440;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS20440;old_locus_tag=CCO53_20400 NZ_NPLZ01000014.1 tRNAscan-SE tRNA 44923 44998 . + . ID=rna-CCO53_RS20440;Parent=gene-CCO53_RS20440;anticodon=(pos:44956..44958);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS20440;product=tRNA-Thr NZ_NPLZ01000014.1 tRNAscan-SE exon 44923 44998 . + . ID=exon-CCO53_RS20440-1;Parent=rna-CCO53_RS20440;anticodon=(pos:44956..44958);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS20440;product=tRNA-Thr NZ_NPLZ01000014.1 RefSeq gene 45222 45620 . + . ID=gene-CCO53_RS20445;Name=CCO53_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20445;old_locus_tag=CCO53_20405 NZ_NPLZ01000014.1 Protein Homology CDS 45222 45620 . + 0 ID=cds-WP_058331267.1;Parent=gene-CCO53_RS20445;Dbxref=GenBank:WP_058331267.1;Name=WP_058331267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=CCO53_RS20445;product=hypothetical protein;protein_id=WP_058331267.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 45668 46426 . - . ID=gene-CCO53_RS20450;Name=CCO53_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20450;old_locus_tag=CCO53_20410 NZ_NPLZ01000014.1 Protein Homology CDS 45668 46426 . - 0 ID=cds-WP_094887818.1;Parent=gene-CCO53_RS20450;Dbxref=GenBank:WP_094887818.1;Name=WP_094887818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=CCO53_RS20450;product=fimbrial assembly chaperone;protein_id=WP_094887818.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 46392 47717 . - . ID=gene-CCO53_RS20455;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=CCO53_RS20455;old_locus_tag=CCO53_20415 NZ_NPLZ01000014.1 Protein Homology CDS 46392 47717 . - 0 ID=cds-WP_000899100.1;Parent=gene-CCO53_RS20455;Dbxref=GenBank:WP_000899100.1;Name=WP_000899100.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO53_RS20455;product=fimbrial usher protein StbD;protein_id=WP_000899100.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 47722 50283 . - . ID=gene-CCO53_RS20460;Name=CCO53_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20460;old_locus_tag=CCO53_20420 NZ_NPLZ01000014.1 Protein Homology CDS 47722 50283 . - 0 ID=cds-WP_094887819.1;Parent=gene-CCO53_RS20460;Dbxref=GenBank:WP_094887819.1;Name=WP_094887819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=CCO53_RS20460;product=fimbrial outer membrane usher protein;protein_id=WP_094887819.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 50267 51028 . - . ID=gene-CCO53_RS20465;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=CCO53_RS20465;old_locus_tag=CCO53_20425 NZ_NPLZ01000014.1 Protein Homology CDS 50267 51028 . - 0 ID=cds-WP_000781492.1;Parent=gene-CCO53_RS20465;Dbxref=GenBank:WP_000781492.1;Name=WP_000781492.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=CCO53_RS20465;product=fimbrial biogenesis chaperone StbB;protein_id=WP_000781492.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 51090 51626 . - . ID=gene-CCO53_RS20470;Name=CCO53_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20470;old_locus_tag=CCO53_20430 NZ_NPLZ01000014.1 Protein Homology CDS 51090 51626 . - 0 ID=cds-WP_000062033.1;Parent=gene-CCO53_RS20470;Dbxref=GenBank:WP_000062033.1;Name=WP_000062033.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=CCO53_RS20470;product=fimbrial protein;protein_id=WP_000062033.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 52289 53023 . + . ID=gene-CCO53_RS20475;Name=CCO53_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20475;old_locus_tag=CCO53_20440 NZ_NPLZ01000014.1 Protein Homology CDS 52289 53023 . + 0 ID=cds-WP_139775868.1;Parent=gene-CCO53_RS20475;Dbxref=GenBank:WP_139775868.1;Name=WP_139775868.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=CCO53_RS20475;product=winged helix-turn-helix domain-containing protein;protein_id=WP_139775868.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 52996 53296 . + . ID=gene-CCO53_RS20480;Name=CCO53_RS20480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS20480;old_locus_tag=CCO53_20445;pseudo=true NZ_NPLZ01000014.1 Protein Homology CDS 52996 53296 . + 0 ID=cds-CCO53_RS20480;Parent=gene-CCO53_RS20480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=CCO53_RS20480;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 53798 55372 . + . ID=gene-CCO53_RS20490;Name=CCO53_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20490;old_locus_tag=CCO53_20455 NZ_NPLZ01000014.1 Protein Homology CDS 53798 55372 . + 0 ID=cds-WP_072102864.1;Parent=gene-CCO53_RS20490;Dbxref=GenBank:WP_072102864.1;Name=WP_072102864.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=CCO53_RS20490;product=EAL domain-containing protein;protein_id=WP_072102864.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 55472 56215 . + . ID=gene-CCO53_RS20495;Name=CCO53_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20495;old_locus_tag=CCO53_20460 NZ_NPLZ01000014.1 Protein Homology CDS 55472 56215 . + 0 ID=cds-WP_000081375.1;Parent=gene-CCO53_RS20495;Dbxref=GenBank:WP_000081375.1;Name=WP_000081375.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=CCO53_RS20495;product=transcriptional regulator;protein_id=WP_000081375.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 56188 56676 . + . ID=gene-CCO53_RS20500;Name=CCO53_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20500;old_locus_tag=CCO53_20465 NZ_NPLZ01000014.1 Protein Homology CDS 56188 56676 . + 0 ID=cds-WP_000545419.1;Parent=gene-CCO53_RS20500;Dbxref=GenBank:WP_000545419.1;Name=WP_000545419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=CCO53_RS20500;product=hypothetical protein;protein_id=WP_000545419.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 57077 57601 . + . ID=gene-CCO53_RS20505;Name=CCO53_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20505;old_locus_tag=CCO53_20470 NZ_NPLZ01000014.1 Protein Homology CDS 57077 57601 . + 0 ID=cds-WP_000830237.1;Parent=gene-CCO53_RS20505;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=CCO53_RS20505;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 57745 58386 . + . ID=gene-CCO53_RS20510;Name=CCO53_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20510;old_locus_tag=CCO53_20475 NZ_NPLZ01000014.1 Protein Homology CDS 57745 58386 . + 0 ID=cds-WP_000610827.1;Parent=gene-CCO53_RS20510;Dbxref=GenBank:WP_000610827.1;Name=WP_000610827.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=CCO53_RS20510;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610827.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 58397 58621 . + . ID=gene-CCO53_RS20515;Name=CCO53_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20515;old_locus_tag=CCO53_20480 NZ_NPLZ01000014.1 Protein Homology CDS 58397 58621 . + 0 ID=cds-WP_000737127.1;Parent=gene-CCO53_RS20515;Dbxref=GenBank:WP_000737127.1;Name=WP_000737127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=CCO53_RS20515;product=membrane protein;protein_id=WP_000737127.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 58679 59038 . + . ID=gene-CCO53_RS20520;Name=CCO53_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20520;old_locus_tag=CCO53_20485 NZ_NPLZ01000014.1 Protein Homology CDS 58679 59038 . + 0 ID=cds-WP_000722978.1;Parent=gene-CCO53_RS20520;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=CCO53_RS20520;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 59106 60563 . - . ID=gene-CCO53_RS20525;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=CCO53_RS20525;old_locus_tag=CCO53_20490 NZ_NPLZ01000014.1 Protein Homology CDS 59106 60563 . - 0 ID=cds-WP_001543180.1;Parent=gene-CCO53_RS20525;Dbxref=GenBank:WP_001543180.1;Name=WP_001543180.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=CCO53_RS20525;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_001543180.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 60580 63747 . - . ID=gene-CCO53_RS20530;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=CCO53_RS20530;old_locus_tag=CCO53_20495 NZ_NPLZ01000014.1 Protein Homology CDS 60580 63747 . - 0 ID=cds-WP_094887820.1;Parent=gene-CCO53_RS20530;Dbxref=GenBank:WP_094887820.1;Name=WP_094887820.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=CCO53_RS20530;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_094887820.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 63744 64970 . - . ID=gene-CCO53_RS20535;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=CCO53_RS20535;old_locus_tag=CCO53_20500 NZ_NPLZ01000014.1 Protein Homology CDS 63744 64970 . - 0 ID=cds-WP_001254851.1;Parent=gene-CCO53_RS20535;Dbxref=GenBank:WP_001254851.1;Name=WP_001254851.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=CCO53_RS20535;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_001254851.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 65247 67535 . + . ID=gene-CCO53_RS20540;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=CCO53_RS20540;old_locus_tag=CCO53_20505 NZ_NPLZ01000014.1 Protein Homology CDS 65247 67535 . + 0 ID=cds-WP_094887821.1;Parent=gene-CCO53_RS20540;Dbxref=GenBank:WP_094887821.1;Name=WP_094887821.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=CCO53_RS20540;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_094887821.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 67547 68011 . + . ID=gene-CCO53_RS20545;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=CCO53_RS20545;old_locus_tag=CCO53_20510 NZ_NPLZ01000014.1 Protein Homology CDS 67547 68011 . + 0 ID=cds-WP_001020583.1;Parent=gene-CCO53_RS20545;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=CCO53_RS20545;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 68089 68283 . + . ID=gene-CCO53_RS20550;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=CCO53_RS20550;old_locus_tag=CCO53_20515 NZ_NPLZ01000014.1 Protein Homology CDS 68089 68283 . + 0 ID=cds-WP_001159470.1;Parent=gene-CCO53_RS20550;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=CCO53_RS20550;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 68575 69828 . + . ID=gene-CCO53_RS20555;Name=CCO53_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20555;old_locus_tag=CCO53_20520 NZ_NPLZ01000014.1 Protein Homology CDS 68575 69828 . + 0 ID=cds-WP_000288502.1;Parent=gene-CCO53_RS20555;Dbxref=GenBank:WP_000288502.1;Name=WP_000288502.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=CCO53_RS20555;product=MFS transporter;protein_id=WP_000288502.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 70017 71975 . + . ID=gene-CCO53_RS20560;Name=CCO53_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20560;old_locus_tag=CCO53_20525 NZ_NPLZ01000014.1 Protein Homology CDS 70017 71975 . + 0 ID=cds-WP_000910358.1;Parent=gene-CCO53_RS20560;Dbxref=GenBank:WP_000910358.1;Name=WP_000910358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=CCO53_RS20560;product=site-specific DNA-methyltransferase;protein_id=WP_000910358.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 71985 74957 . + . ID=gene-CCO53_RS20565;Name=CCO53_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20565;old_locus_tag=CCO53_20530 NZ_NPLZ01000014.1 Protein Homology CDS 71985 74957 . + 0 ID=cds-WP_080197954.1;Parent=gene-CCO53_RS20565;Dbxref=GenBank:WP_080197954.1;Name=WP_080197954.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=CCO53_RS20565;product=type III restriction-modification system endonuclease;protein_id=WP_080197954.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 75234 75335 . + . ID=gene-CCO53_RS20570;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=CCO53_RS20570;old_locus_tag=CCO53_20535 NZ_NPLZ01000014.1 Protein Homology CDS 75234 75335 . + 0 ID=cds-WP_000934834.1;Parent=gene-CCO53_RS20570;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=CCO53_RS20570;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 75452 76855 . + . ID=gene-CCO53_RS20575;Name=CCO53_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20575;old_locus_tag=CCO53_20540 NZ_NPLZ01000014.1 Protein Homology CDS 75452 76855 . + 0 ID=cds-WP_000393711.1;Parent=gene-CCO53_RS20575;Dbxref=GenBank:WP_000393711.1;Name=WP_000393711.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=CCO53_RS20575;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393711.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 76852 77862 . + . ID=gene-CCO53_RS20580;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO53_RS20580;old_locus_tag=CCO53_20545 NZ_NPLZ01000014.1 Protein Homology CDS 76852 77862 . + 0 ID=cds-WP_000151047.1;Parent=gene-CCO53_RS20580;Dbxref=GenBank:WP_000151047.1;Name=WP_000151047.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=CCO53_RS20580;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151047.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 77862 77933 . + . ID=gene-CCO53_RS24270;Name=CCO53_RS24270;end_range=77933,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24270;partial=true;pseudo=true NZ_NPLZ01000014.1 Protein Homology CDS 77862 77933 . + 0 ID=cds-CCO53_RS24270;Parent=gene-CCO53_RS24270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=77933,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=CCO53_RS24270;partial=true;product=DUF2474 family protein;pseudo=true;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 77912 78104 . + . ID=gene-CCO53_RS24275;Name=CCO53_RS24275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24275;pseudo=true NZ_NPLZ01000014.1 Protein Homology CDS 77912 78104 . + 0 ID=cds-CCO53_RS24275;Parent=gene-CCO53_RS24275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=CCO53_RS24275;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 78200 79204 . + . ID=gene-CCO53_RS20590;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=CCO53_RS20590;old_locus_tag=CCO53_20555 NZ_NPLZ01000014.1 Protein Homology CDS 78200 79204 . + 0 ID=cds-WP_000074605.1;Parent=gene-CCO53_RS20590;Dbxref=GenBank:WP_000074605.1;Name=WP_000074605.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=CCO53_RS20590;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074605.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 79350 81458 . + . ID=gene-CCO53_RS20595;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=CCO53_RS20595;old_locus_tag=CCO53_20560 NZ_NPLZ01000014.1 Protein Homology CDS 79350 81458 . + 0 ID=cds-WP_001127714.1;Parent=gene-CCO53_RS20595;Dbxref=GenBank:WP_001127714.1;Name=WP_001127714.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=CCO53_RS20595;product=ferrioxamine B receptor FoxA;protein_id=WP_001127714.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 81497 82129 . - . ID=gene-CCO53_RS20600;Name=CCO53_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20600;old_locus_tag=CCO53_20565 NZ_NPLZ01000014.1 Protein Homology CDS 81497 82129 . - 0 ID=cds-WP_000433131.1;Parent=gene-CCO53_RS20600;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=CCO53_RS20600;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 82361 82636 . + . ID=gene-CCO53_RS20605;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=CCO53_RS20605;old_locus_tag=CCO53_20570 NZ_NPLZ01000014.1 Protein Homology CDS 82361 82636 . + 0 ID=cds-WP_000848026.1;Parent=gene-CCO53_RS20605;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=CCO53_RS20605;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 82772 84397 . - . ID=gene-CCO53_RS20610;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=CCO53_RS20610;old_locus_tag=CCO53_20575 NZ_NPLZ01000014.1 Protein Homology CDS 82772 84397 . - 0 ID=cds-WP_010835257.1;Parent=gene-CCO53_RS20610;Dbxref=GenBank:WP_010835257.1;Name=WP_010835257.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=CCO53_RS20610;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_010835257.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 84663 85550 . + . ID=gene-CCO53_RS20615;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=CCO53_RS20615;old_locus_tag=CCO53_20580 NZ_NPLZ01000014.1 Protein Homology CDS 84663 85550 . + 0 ID=cds-WP_001577356.1;Parent=gene-CCO53_RS20615;Dbxref=GenBank:WP_001577356.1;Name=WP_001577356.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=CCO53_RS20615;product=methylisocitrate lyase;protein_id=WP_001577356.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 85673 86842 . + . ID=gene-CCO53_RS20620;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=CCO53_RS20620;old_locus_tag=CCO53_20585 NZ_NPLZ01000014.1 Protein Homology CDS 85673 86842 . + 0 ID=cds-WP_000132749.1;Parent=gene-CCO53_RS20620;Dbxref=GenBank:WP_000132749.1;Name=WP_000132749.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=CCO53_RS20620;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_000132749.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 86882 88333 . + . ID=gene-CCO53_RS20625;Name=CCO53_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20625;old_locus_tag=CCO53_20590 NZ_NPLZ01000014.1 Protein Homology CDS 86882 88333 . + 0 ID=cds-WP_023202226.1;Parent=gene-CCO53_RS20625;Dbxref=GenBank:WP_023202226.1;Name=WP_023202226.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=CCO53_RS20625;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_023202226.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 88374 90260 . + . ID=gene-CCO53_RS20630;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=CCO53_RS20630;old_locus_tag=CCO53_20595 NZ_NPLZ01000014.1 Protein Homology CDS 88374 90260 . + 0 ID=cds-WP_000010220.1;Parent=gene-CCO53_RS20630;Dbxref=GenBank:WP_000010220.1;Name=WP_000010220.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=CCO53_RS20630;product=propionate--CoA ligase;protein_id=WP_000010220.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 90364 91338 . - . ID=gene-CCO53_RS20635;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CCO53_RS20635;old_locus_tag=CCO53_20600 NZ_NPLZ01000014.1 Protein Homology CDS 90364 91338 . - 0 ID=cds-WP_000130729.1;Parent=gene-CCO53_RS20635;Dbxref=GenBank:WP_000130729.1;Name=WP_000130729.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=CCO53_RS20635;product=porphobilinogen synthase;protein_id=WP_000130729.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 91851 94796 . + . ID=gene-CCO53_RS20640;Name=CCO53_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20640;old_locus_tag=CCO53_20605 NZ_NPLZ01000014.1 Protein Homology CDS 91851 94796 . + 0 ID=cds-WP_020999991.1;Parent=gene-CCO53_RS20640;Dbxref=GenBank:WP_020999991.1;Name=WP_020999991.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=CCO53_RS20640;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_020999991.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 94881 95504 . + . ID=gene-CCO53_RS20645;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=CCO53_RS20645;old_locus_tag=CCO53_20610 NZ_NPLZ01000014.1 Protein Homology CDS 94881 95504 . + 0 ID=cds-WP_000950242.1;Parent=gene-CCO53_RS20645;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=CCO53_RS20645;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 95549 96706 . - . ID=gene-CCO53_RS20650;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=CCO53_RS20650;old_locus_tag=CCO53_20615 NZ_NPLZ01000014.1 Protein Homology CDS 95549 96706 . - 0 ID=cds-WP_000830777.1;Parent=gene-CCO53_RS20650;Dbxref=GenBank:WP_000830777.1;Name=WP_000830777.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=CCO53_RS20650;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830777.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 97053 98273 . + . ID=gene-CCO53_RS20660;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=CCO53_RS20660;old_locus_tag=CCO53_20625 NZ_NPLZ01000014.1 Protein Homology CDS 97053 98273 . + 0 ID=cds-WP_000477023.1;Parent=gene-CCO53_RS20660;Dbxref=GenBank:WP_000477023.1;Name=WP_000477023.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=CCO53_RS20660;product=peptide antibiotic transporter SbmA;protein_id=WP_000477023.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 98288 99382 . + . ID=gene-CCO53_RS20665;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=CCO53_RS20665;old_locus_tag=CCO53_20630 NZ_NPLZ01000014.1 Protein Homology CDS 98288 99382 . + 0 ID=cds-WP_076726142.1;Parent=gene-CCO53_RS20665;Dbxref=GenBank:WP_076726142.1;Name=WP_076726142.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=CCO53_RS20665;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_076726142.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 99420 99728 . - . ID=gene-CCO53_RS20670;Name=CCO53_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20670;old_locus_tag=CCO53_20635 NZ_NPLZ01000014.1 Protein Homology CDS 99420 99728 . - 0 ID=cds-WP_000763139.1;Parent=gene-CCO53_RS20670;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=CCO53_RS20670;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 99996 100211 . + . ID=gene-CCO53_RS20675;Name=CCO53_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20675;old_locus_tag=CCO53_20640 NZ_NPLZ01000014.1 Protein Homology CDS 99996 100211 . + 0 ID=cds-WP_001239240.1;Parent=gene-CCO53_RS20675;Dbxref=GenBank:WP_001239240.1;Name=WP_001239240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=CCO53_RS20675;product=DUF2754 family protein;protein_id=WP_001239240.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 100237 101331 . - . ID=gene-CCO53_RS20680;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=CCO53_RS20680;old_locus_tag=CCO53_20645 NZ_NPLZ01000014.1 Protein Homology CDS 100237 101331 . - 0 ID=cds-WP_001096588.1;Parent=gene-CCO53_RS20680;Dbxref=GenBank:WP_001096588.1;Name=WP_001096588.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=CCO53_RS20680;product=D-alanine--D-alanine ligase;protein_id=WP_001096588.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 101409 102122 . + . ID=gene-CCO53_RS20685;Name=CCO53_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20685;old_locus_tag=CCO53_20650 NZ_NPLZ01000014.1 Protein Homology CDS 101409 102122 . + 0 ID=cds-WP_000480792.1;Parent=gene-CCO53_RS20685;Dbxref=GenBank:WP_000480792.1;Name=WP_000480792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=CCO53_RS20685;product=extensin family protein;protein_id=WP_000480792.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 102291 103502 . + . ID=gene-CCO53_RS20690;Name=CCO53_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20690;old_locus_tag=CCO53_20655 NZ_NPLZ01000014.1 Protein Homology CDS 102291 103502 . + 0 ID=cds-WP_000446768.1;Parent=gene-CCO53_RS20690;Dbxref=GenBank:WP_000446768.1;Name=WP_000446768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=CCO53_RS20690;product=multidrug efflux MFS transporter;protein_id=WP_000446768.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 103799 104059 . + . ID=gene-CCO53_RS20695;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=CCO53_RS20695;old_locus_tag=CCO53_20660 NZ_NPLZ01000014.1 Protein Homology CDS 103799 104059 . + 0 ID=cds-WP_001518423.1;Parent=gene-CCO53_RS20695;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=CCO53_RS20695;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 104412 104732 . + . ID=gene-CCO53_RS20700;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=CCO53_RS20700;old_locus_tag=CCO53_20665 NZ_NPLZ01000014.1 Protein Homology CDS 104412 104732 . + 0 ID=cds-WP_000705165.1;Parent=gene-CCO53_RS20700;Dbxref=GenBank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=CCO53_RS20700;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 104824 105936 . + . ID=gene-CCO53_RS20705;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=CCO53_RS20705;old_locus_tag=CCO53_20670 NZ_NPLZ01000014.1 Protein Homology CDS 104824 105936 . + 0 ID=cds-WP_000484093.1;Parent=gene-CCO53_RS20705;Dbxref=GenBank:WP_000484093.1;Name=WP_000484093.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=CCO53_RS20705;product=diguanylate cyclase AdrA;protein_id=WP_000484093.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 105951 106760 . - . ID=gene-CCO53_RS20710;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CCO53_RS20710;old_locus_tag=CCO53_20675 NZ_NPLZ01000014.1 Protein Homology CDS 105951 106760 . - 0 ID=cds-WP_000412193.1;Parent=gene-CCO53_RS20710;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=CCO53_RS20710;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 106900 107355 . + . ID=gene-CCO53_RS20715;Name=CCO53_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20715;old_locus_tag=CCO53_20680 NZ_NPLZ01000014.1 Protein Homology CDS 106900 107355 . + 0 ID=cds-WP_080160374.1;Parent=gene-CCO53_RS20715;Dbxref=GenBank:WP_080160374.1;Name=WP_080160374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=CCO53_RS20715;product=YaiI/YqxD family protein;protein_id=WP_080160374.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 107540 108085 . + . ID=gene-CCO53_RS20720;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=CCO53_RS20720;old_locus_tag=CCO53_20685 NZ_NPLZ01000014.1 Protein Homology CDS 107540 108085 . + 0 ID=cds-WP_000983569.1;Parent=gene-CCO53_RS20720;Dbxref=GenBank:WP_000983569.1;Name=WP_000983569.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=CCO53_RS20720;product=shikimate kinase AroL;protein_id=WP_000983569.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 108112 108303 . + . ID=gene-CCO53_RS20725;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=CCO53_RS20725;old_locus_tag=CCO53_20690 NZ_NPLZ01000014.1 Protein Homology CDS 108112 108303 . + 0 ID=cds-WP_001143161.1;Parent=gene-CCO53_RS20725;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=CCO53_RS20725;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 108554 109231 . + . ID=gene-CCO53_RS20730;Name=CCO53_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20730;old_locus_tag=CCO53_20695 NZ_NPLZ01000014.1 Protein Homology CDS 108554 109231 . + 0 ID=cds-WP_001276437.1;Parent=gene-CCO53_RS20730;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=CCO53_RS20730;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 109303 109587 . + . ID=gene-CCO53_RS20735;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=CCO53_RS20735;old_locus_tag=CCO53_20700 NZ_NPLZ01000014.1 Protein Homology CDS 109303 109587 . + 0 ID=cds-WP_000941953.1;Parent=gene-CCO53_RS20735;Dbxref=GenBank:WP_000941953.1;Name=WP_000941953.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=CCO53_RS20735;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941953.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 109625 110536 . - . ID=gene-CCO53_RS20740;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=CCO53_RS20740;old_locus_tag=CCO53_20705 NZ_NPLZ01000014.1 Protein Homology CDS 109625 110536 . - 0 ID=cds-WP_000964305.1;Parent=gene-CCO53_RS20740;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=CCO53_RS20740;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 110662 111570 . + . ID=gene-CCO53_RS20745;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=CCO53_RS20745;old_locus_tag=CCO53_20710 NZ_NPLZ01000014.1 Protein Homology CDS 110662 111570 . + 0 ID=cds-WP_080160375.1;Parent=gene-CCO53_RS20745;Dbxref=GenBank:WP_080160375.1;Name=WP_080160375.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=CCO53_RS20745;product=fructokinase;protein_id=WP_080160375.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 111590 112762 . - . ID=gene-CCO53_RS20750;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=CCO53_RS20750;old_locus_tag=CCO53_20715 NZ_NPLZ01000014.1 Protein Homology CDS 111590 112762 . - 0 ID=cds-WP_058331278.1;Parent=gene-CCO53_RS20750;Dbxref=GenBank:WP_058331278.1;Name=WP_058331278.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=CCO53_RS20750;product=MFS transporter AraJ;protein_id=WP_058331278.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 112935 116075 . - . ID=gene-CCO53_RS20755;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CCO53_RS20755;old_locus_tag=CCO53_20720 NZ_NPLZ01000014.1 Protein Homology CDS 112935 116075 . - 0 ID=cds-WP_080160376.1;Parent=gene-CCO53_RS20755;Dbxref=GenBank:WP_080160376.1;Name=WP_080160376.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=CCO53_RS20755;product=exonuclease subunit SbcC;protein_id=WP_080160376.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 116072 117274 . - . ID=gene-CCO53_RS20760;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CCO53_RS20760;old_locus_tag=CCO53_20725 NZ_NPLZ01000014.1 Protein Homology CDS 116072 117274 . - 0 ID=cds-WP_023194028.1;Parent=gene-CCO53_RS20760;Dbxref=GenBank:WP_023194028.1;Name=WP_023194028.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=CCO53_RS20760;product=exonuclease subunit SbcD;protein_id=WP_023194028.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 117488 118177 . + . ID=gene-CCO53_RS20765;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=CCO53_RS20765;old_locus_tag=CCO53_20730 NZ_NPLZ01000014.1 Protein Homology CDS 117488 118177 . + 0 ID=cds-WP_000113921.1;Parent=gene-CCO53_RS20765;Dbxref=GenBank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=CCO53_RS20765;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 118247 119542 . + . ID=gene-CCO53_RS20770;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=CCO53_RS20770;old_locus_tag=CCO53_20735 NZ_NPLZ01000014.1 Protein Homology CDS 118247 119542 . + 0 ID=cds-WP_061371920.1;Parent=gene-CCO53_RS20770;Dbxref=GenBank:WP_061371920.1;Name=WP_061371920.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=CCO53_RS20770;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_061371920.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 119951 121270 . + . ID=gene-CCO53_RS20775;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CCO53_RS20775;old_locus_tag=CCO53_20740 NZ_NPLZ01000014.1 Protein Homology CDS 119951 121270 . + 0 ID=cds-WP_000149625.1;Parent=gene-CCO53_RS20775;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=CCO53_RS20775;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 121345 122715 . + . ID=gene-CCO53_RS20780;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=CCO53_RS20780;old_locus_tag=CCO53_20745 NZ_NPLZ01000014.1 Protein Homology CDS 121345 122715 . + 0 ID=cds-WP_001537837.1;Parent=gene-CCO53_RS20780;Dbxref=GenBank:WP_001537837.1;Name=WP_001537837.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=CCO53_RS20780;product=proline-specific permease ProY;protein_id=WP_001537837.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 122877 124694 . + . ID=gene-CCO53_RS20785;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=CCO53_RS20785;old_locus_tag=CCO53_20750 NZ_NPLZ01000014.1 Protein Homology CDS 122877 124694 . + 0 ID=cds-WP_058331279.1;Parent=gene-CCO53_RS20785;Dbxref=GenBank:WP_058331279.1;Name=WP_058331279.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=CCO53_RS20785;product=maltodextrin glucosidase;protein_id=WP_058331279.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 124766 125368 . - . ID=gene-CCO53_RS20790;Name=CCO53_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20790;old_locus_tag=CCO53_20755 NZ_NPLZ01000014.1 Protein Homology CDS 124766 125368 . - 0 ID=cds-WP_000244731.1;Parent=gene-CCO53_RS20790;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=CCO53_RS20790;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 125578 126159 . - . ID=gene-CCO53_RS20795;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=CCO53_RS20795;old_locus_tag=CCO53_20760 NZ_NPLZ01000014.1 Protein Homology CDS 125578 126159 . - 0 ID=cds-WP_023202233.1;Parent=gene-CCO53_RS20795;Dbxref=GenBank:WP_023202233.1;Name=WP_023202233.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=CCO53_RS20795;product=ACP phosphodiesterase;protein_id=WP_023202233.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 126253 127317 . + . ID=gene-CCO53_RS20800;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CCO53_RS20800;old_locus_tag=CCO53_20765 NZ_NPLZ01000014.1 Protein Homology CDS 126253 127317 . + 0 ID=cds-WP_001266530.1;Parent=gene-CCO53_RS20800;Dbxref=GenBank:WP_001266530.1;Name=WP_001266530.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=CCO53_RS20800;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266530.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 127514 128641 . + . ID=gene-CCO53_RS20810;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CCO53_RS20810;old_locus_tag=CCO53_20775 NZ_NPLZ01000014.1 Protein Homology CDS 127514 128641 . + 0 ID=cds-WP_000667305.1;Parent=gene-CCO53_RS20810;Dbxref=GenBank:WP_000667305.1;Name=WP_000667305.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=CCO53_RS20810;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667305.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 128664 128996 . + . ID=gene-CCO53_RS20815;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CCO53_RS20815;old_locus_tag=CCO53_20780 NZ_NPLZ01000014.1 Protein Homology CDS 128664 128996 . + 0 ID=cds-WP_000007628.1;Parent=gene-CCO53_RS20815;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=CCO53_RS20815;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 129024 130871 . + . ID=gene-CCO53_RS20820;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=CCO53_RS20820;old_locus_tag=CCO53_20785 NZ_NPLZ01000014.1 Protein Homology CDS 129024 130871 . + 0 ID=cds-WP_000934811.1;Parent=gene-CCO53_RS20820;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=CCO53_RS20820;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 130882 131853 . + . ID=gene-CCO53_RS20825;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=CCO53_RS20825;old_locus_tag=CCO53_20790 NZ_NPLZ01000014.1 Protein Homology CDS 130882 131853 . + 0 ID=cds-WP_000046629.1;Parent=gene-CCO53_RS20825;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=CCO53_RS20825;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 132002 132367 . + . ID=gene-CCO53_RS20830;Name=CCO53_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20830;old_locus_tag=CCO53_20795 NZ_NPLZ01000014.1 Protein Homology CDS 132002 132367 . + 0 ID=cds-WP_000793035.1;Parent=gene-CCO53_RS20830;Dbxref=GenBank:WP_000793035.1;Name=WP_000793035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=CCO53_RS20830;product=VOC family protein;protein_id=WP_000793035.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 132393 133085 . + . ID=gene-CCO53_RS20835;Name=CCO53_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20835;old_locus_tag=CCO53_20800 NZ_NPLZ01000014.1 Protein Homology CDS 132393 133085 . + 0 ID=cds-WP_000198318.1;Parent=gene-CCO53_RS20835;Dbxref=GenBank:WP_000198318.1;Name=WP_000198318.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=CCO53_RS20835;product=helix-turn-helix transcriptional regulator;protein_id=WP_000198318.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq gene 133255 133602 . + . ID=gene-CCO53_RS20840;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=CCO53_RS20840;old_locus_tag=CCO53_20805 NZ_NPLZ01000014.1 Protein Homology CDS 133255 133602 . + 0 ID=cds-WP_000974818.1;Parent=gene-CCO53_RS20840;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=CCO53_RS20840;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 NZ_NPLZ01000014.1 RefSeq pseudogene 133850 134041 . - . ID=gene-CCO53_RS23855;Name=impX;end_range=134041,.;gbkey=Gene;gene=impX;gene_biotype=pseudogene;locus_tag=CCO53_RS23855;old_locus_tag=CCO53_20815;partial=true;pseudo=true NZ_NPLZ01000014.1 Protein Homology CDS 133850 134041 . - 0 ID=cds-CCO53_RS23855;Parent=gene-CCO53_RS23855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=134041,.;gbkey=CDS;gene=impX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989124.1;locus_tag=CCO53_RS23855;partial=true;product=nucleoside efflux transporter ImpX;pseudo=true;transl_table=11 ##sequence-region NZ_NPLZ01000015.1 1 91578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000015.1 RefSeq region 1 91578 . + . ID=NZ_NPLZ01000015.1:1..91578;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000015.1 RefSeq gene 360 905 . - . ID=gene-CCO53_RS20855;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=CCO53_RS20855;old_locus_tag=CCO53_20820 NZ_NPLZ01000015.1 Protein Homology CDS 360 905 . - 0 ID=cds-WP_000853982.1;Parent=gene-CCO53_RS20855;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=CCO53_RS20855;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 917 2368 . - . ID=gene-CCO53_RS20860;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=CCO53_RS20860;old_locus_tag=CCO53_20825 NZ_NPLZ01000015.1 Protein Homology CDS 917 2368 . - 0 ID=cds-WP_000545688.1;Parent=gene-CCO53_RS20860;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=CCO53_RS20860;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 2407 3021 . - . ID=gene-CCO53_RS20865;Name=CCO53_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20865;old_locus_tag=CCO53_20830 NZ_NPLZ01000015.1 Protein Homology CDS 2407 3021 . - 0 ID=cds-WP_058331976.1;Parent=gene-CCO53_RS20865;Dbxref=GenBank:WP_058331976.1;Name=WP_058331976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=CCO53_RS20865;product=IMPACT family protein;protein_id=WP_058331976.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 3021 4352 . - . ID=gene-CCO53_RS20870;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=CCO53_RS20870;old_locus_tag=CCO53_20835 NZ_NPLZ01000015.1 Protein Homology CDS 3021 4352 . - 0 ID=cds-WP_061372228.1;Parent=gene-CCO53_RS20870;Dbxref=GenBank:WP_061372228.1;Name=WP_061372228.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=CCO53_RS20870;product=Xaa-Pro dipeptidase;protein_id=WP_061372228.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 4542 6731 . + . ID=gene-CCO53_RS20875;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CCO53_RS20875;old_locus_tag=CCO53_20840 NZ_NPLZ01000015.1 Protein Homology CDS 4542 6731 . + 0 ID=cds-WP_080160486.1;Parent=gene-CCO53_RS20875;Dbxref=GenBank:WP_080160486.1;Name=WP_080160486.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=CCO53_RS20875;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_080160486.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 6741 7904 . + . ID=gene-CCO53_RS20880;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=CCO53_RS20880;old_locus_tag=CCO53_20845 NZ_NPLZ01000015.1 Protein Homology CDS 6741 7904 . + 0 ID=cds-WP_058331973.1;Parent=gene-CCO53_RS20880;Dbxref=GenBank:WP_058331973.1;Name=WP_058331973.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=CCO53_RS20880;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_058331973.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 8101 9924 . - . ID=gene-CCO53_RS20885;Name=CCO53_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20885;old_locus_tag=CCO53_20850 NZ_NPLZ01000015.1 Protein Homology CDS 8101 9924 . - 0 ID=cds-WP_000669887.1;Parent=gene-CCO53_RS20885;Dbxref=GenBank:WP_000669887.1;Name=WP_000669887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=CCO53_RS20885;product=aryl-sulfate sulfotransferase;protein_id=WP_000669887.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 10178 10879 . - . ID=gene-CCO53_RS20890;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=CCO53_RS20890;old_locus_tag=CCO53_20855 NZ_NPLZ01000015.1 Protein Homology CDS 10178 10879 . - 0 ID=cds-WP_000209831.1;Parent=gene-CCO53_RS20890;Dbxref=GenBank:WP_000209831.1;Name=WP_000209831.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=CCO53_RS20890;product=NAD(P)H-flavin reductase;protein_id=WP_000209831.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 10965 12443 . - . ID=gene-CCO53_RS20895;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=CCO53_RS20895;old_locus_tag=CCO53_20860 NZ_NPLZ01000015.1 Protein Homology CDS 10965 12443 . - 0 ID=cds-WP_072275485.1;Parent=gene-CCO53_RS20895;Dbxref=GenBank:WP_072275485.1;Name=WP_072275485.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=CCO53_RS20895;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_072275485.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 12629 13117 . + . ID=gene-CCO53_RS20900;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=CCO53_RS20900;old_locus_tag=CCO53_20865 NZ_NPLZ01000015.1 Protein Homology CDS 12629 13117 . + 0 ID=cds-WP_001192410.1;Parent=gene-CCO53_RS20900;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=CCO53_RS20900;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 13125 13907 . - . ID=gene-CCO53_RS20905;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=CCO53_RS20905;old_locus_tag=CCO53_20870 NZ_NPLZ01000015.1 Protein Homology CDS 13125 13907 . - 0 ID=cds-WP_080160485.1;Parent=gene-CCO53_RS20905;Dbxref=GenBank:WP_080160485.1;Name=WP_080160485.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=CCO53_RS20905;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_080160485.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 13949 14728 . - . ID=gene-CCO53_RS20910;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=CCO53_RS20910;old_locus_tag=CCO53_20875 NZ_NPLZ01000015.1 Protein Homology CDS 13949 14728 . - 0 ID=cds-WP_000257554.1;Parent=gene-CCO53_RS20910;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=CCO53_RS20910;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 14731 15279 . - . ID=gene-CCO53_RS20915;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=CCO53_RS20915;old_locus_tag=CCO53_20880 NZ_NPLZ01000015.1 Protein Homology CDS 14731 15279 . - 0 ID=cds-WP_000459612.1;Parent=gene-CCO53_RS20915;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=CCO53_RS20915;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 15283 15537 . - . ID=gene-CCO53_RS20920;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=CCO53_RS20920;old_locus_tag=CCO53_20885 NZ_NPLZ01000015.1 Protein Homology CDS 15283 15537 . - 0 ID=cds-WP_000508972.1;Parent=gene-CCO53_RS20920;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=CCO53_RS20920;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 15743 17383 . - . ID=gene-CCO53_RS20925;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=CCO53_RS20925;old_locus_tag=CCO53_20890 NZ_NPLZ01000015.1 Protein Homology CDS 15743 17383 . - 0 ID=cds-WP_000187559.1;Parent=gene-CCO53_RS20925;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=CCO53_RS20925;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 17380 17985 . - . ID=gene-CCO53_RS20930;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=CCO53_RS20930;old_locus_tag=CCO53_20895 NZ_NPLZ01000015.1 Protein Homology CDS 17380 17985 . - 0 ID=cds-WP_001116093.1;Parent=gene-CCO53_RS20930;Dbxref=GenBank:WP_001116093.1;Name=WP_001116093.1;Ontology_term=GO:0032150;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process from chorismate|0032150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=CCO53_RS20930;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116093.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 17995 18750 . - . ID=gene-CCO53_RS20935;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=CCO53_RS20935;old_locus_tag=CCO53_20900 NZ_NPLZ01000015.1 Protein Homology CDS 17995 18750 . - 0 ID=cds-WP_000229009.1;Parent=gene-CCO53_RS20935;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=CCO53_RS20935;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 18846 20276 . - . ID=gene-CCO53_RS20940;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=CCO53_RS20940;old_locus_tag=CCO53_20905 NZ_NPLZ01000015.1 Protein Homology CDS 18846 20276 . - 0 ID=cds-WP_000355562.1;Parent=gene-CCO53_RS20940;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=CCO53_RS20940;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 20416 21177 . - . ID=gene-CCO53_RS20945;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=CCO53_RS20945;old_locus_tag=CCO53_20910 NZ_NPLZ01000015.1 Protein Homology CDS 20416 21177 . - 0 ID=cds-WP_000045169.1;Parent=gene-CCO53_RS20945;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=CCO53_RS20945;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 21436 22248 . + . ID=gene-CCO53_RS20950;Name=CCO53_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20950;old_locus_tag=CCO53_20915 NZ_NPLZ01000015.1 Protein Homology CDS 21436 22248 . + 0 ID=cds-WP_000213959.1;Parent=gene-CCO53_RS20950;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=CCO53_RS20950;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 22328 23671 . - . ID=gene-CCO53_RS20955;Name=CCO53_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20955;old_locus_tag=CCO53_20920 NZ_NPLZ01000015.1 Protein Homology CDS 22328 23671 . - 0 ID=cds-WP_000017949.1;Parent=gene-CCO53_RS20955;Dbxref=GenBank:WP_000017949.1;Name=WP_000017949.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=CCO53_RS20955;product=anaerobic sulfatase maturase;protein_id=WP_000017949.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 24006 26270 . - . ID=gene-CCO53_RS20960;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CCO53_RS20960;old_locus_tag=CCO53_20925 NZ_NPLZ01000015.1 Protein Homology CDS 24006 26270 . - 0 ID=cds-WP_000154185.1;Parent=gene-CCO53_RS20960;Dbxref=GenBank:WP_000154185.1;Name=WP_000154185.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=CCO53_RS20960;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154185.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 26519 27472 . + . ID=gene-CCO53_RS20965;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=CCO53_RS20965;old_locus_tag=CCO53_20930 NZ_NPLZ01000015.1 Protein Homology CDS 26519 27472 . + 0 ID=cds-WP_080160483.1;Parent=gene-CCO53_RS20965;Dbxref=GenBank:WP_080160483.1;Name=WP_080160483.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=CCO53_RS20965;product=HTH-type transcriptional regulator MetR;protein_id=WP_080160483.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 27360 28259 . - . ID=gene-CCO53_RS20970;Name=CCO53_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS20970;old_locus_tag=CCO53_20935 NZ_NPLZ01000015.1 Protein Homology CDS 27360 28259 . - 0 ID=cds-WP_080160482.1;Parent=gene-CCO53_RS20970;Dbxref=GenBank:WP_080160482.1;Name=WP_080160482.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=CCO53_RS20970;product=carboxylate/amino acid/amine transporter;protein_id=WP_080160482.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 28340 29140 . - . ID=gene-CCO53_RS20975;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=CCO53_RS20975;old_locus_tag=CCO53_20940 NZ_NPLZ01000015.1 Protein Homology CDS 28340 29140 . - 0 ID=cds-WP_000285338.1;Parent=gene-CCO53_RS20975;Dbxref=GenBank:WP_000285338.1;Name=WP_000285338.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=CCO53_RS20975;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285338.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 29156 30172 . - . ID=gene-CCO53_RS20980;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=CCO53_RS20980;old_locus_tag=CCO53_20945 NZ_NPLZ01000015.1 Protein Homology CDS 29156 30172 . - 0 ID=cds-WP_000487685.1;Parent=gene-CCO53_RS20980;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=CCO53_RS20980;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 30283 30903 . + . ID=gene-CCO53_RS20985;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=CCO53_RS20985;old_locus_tag=CCO53_20950 NZ_NPLZ01000015.1 Protein Homology CDS 30283 30903 . + 0 ID=cds-WP_000142524.1;Parent=gene-CCO53_RS20985;Dbxref=GenBank:WP_000142524.1;Name=WP_000142524.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=CCO53_RS20985;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142524.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 30943 31563 . - . ID=gene-CCO53_RS20990;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=CCO53_RS20990;old_locus_tag=CCO53_20955 NZ_NPLZ01000015.1 Protein Homology CDS 30943 31563 . - 0 ID=cds-WP_000980080.1;Parent=gene-CCO53_RS20990;Dbxref=GenBank:WP_000980080.1;Name=WP_000980080.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=CCO53_RS20990;product=threonine export protein RhtC;protein_id=WP_000980080.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 31627 33456 . - . ID=gene-CCO53_RS20995;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CCO53_RS20995;old_locus_tag=CCO53_20960 NZ_NPLZ01000015.1 Protein Homology CDS 31627 33456 . - 0 ID=cds-WP_001533487.1;Parent=gene-CCO53_RS20995;Dbxref=GenBank:WP_001533487.1;Name=WP_001533487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=CCO53_RS20995;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001533487.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 33540 34409 . - . ID=gene-CCO53_RS21000;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=CCO53_RS21000;old_locus_tag=CCO53_20965 NZ_NPLZ01000015.1 Protein Homology CDS 33540 34409 . - 0 ID=cds-WP_001201692.1;Parent=gene-CCO53_RS21000;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=CCO53_RS21000;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 34574 35041 . + . ID=gene-CCO53_RS21005;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=CCO53_RS21005;old_locus_tag=CCO53_20970 NZ_NPLZ01000015.1 Protein Homology CDS 34574 35041 . + 0 ID=cds-WP_001277136.1;Parent=gene-CCO53_RS21005;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=CCO53_RS21005;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 35085 35969 . + . ID=gene-CCO53_RS21010;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO53_RS21010;old_locus_tag=CCO53_20975 NZ_NPLZ01000015.1 Protein Homology CDS 35085 35969 . + 0 ID=cds-WP_000339080.1;Parent=gene-CCO53_RS21010;Dbxref=GenBank:WP_000339080.1;Name=WP_000339080.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462840.1;locus_tag=CCO53_RS21010;product=EamA family transporter RarD;protein_id=WP_000339080.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 36004 36462 . + . ID=gene-CCO53_RS21015;Name=CCO53_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21015;old_locus_tag=CCO53_20980 NZ_NPLZ01000015.1 Protein Homology CDS 36004 36462 . + 0 ID=cds-WP_001538085.1;Parent=gene-CCO53_RS21015;Dbxref=GenBank:WP_001538085.1;Name=WP_001538085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462839.1;locus_tag=CCO53_RS21015;product=membrane protein;protein_id=WP_001538085.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 36478 36858 . + . ID=gene-CCO53_RS21020;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=CCO53_RS21020;old_locus_tag=CCO53_20985 NZ_NPLZ01000015.1 Protein Homology CDS 36478 36858 . + 0 ID=cds-WP_000356594.1;Parent=gene-CCO53_RS21020;Dbxref=GenBank:WP_000356594.1;Name=WP_000356594.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462838.1;locus_tag=CCO53_RS21020;product=inner membrane protein YigF;protein_id=WP_000356594.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 36907 37857 . - . ID=gene-CCO53_RS21025;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CCO53_RS21025;old_locus_tag=CCO53_20990 NZ_NPLZ01000015.1 Protein Homology CDS 36907 37857 . - 0 ID=cds-WP_000947139.1;Parent=gene-CCO53_RS21025;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=CCO53_RS21025;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 38013 38069 . - . ID=gene-CCO53_RS24110;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=CCO53_RS24110 NZ_NPLZ01000015.1 Protein Homology CDS 38013 38069 . - 0 ID=cds-WP_212723238.1;Parent=gene-CCO53_RS24110;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=CCO53_RS24110;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 38329 40491 . - . ID=gene-CCO53_RS21035;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=CCO53_RS21035;old_locus_tag=CCO53_21000 NZ_NPLZ01000015.1 Protein Homology CDS 38329 40491 . - 0 ID=cds-WP_000383436.1;Parent=gene-CCO53_RS21035;Dbxref=GenBank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=CCO53_RS21035;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 40627 41343 . - . ID=gene-CCO53_RS21040;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=CCO53_RS21040;old_locus_tag=CCO53_21005 NZ_NPLZ01000015.1 Protein Homology CDS 40627 41343 . - 0 ID=cds-WP_001213560.1;Parent=gene-CCO53_RS21040;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=CCO53_RS21040;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 41343 42245 . - . ID=gene-CCO53_RS21045;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CCO53_RS21045;old_locus_tag=CCO53_21010 NZ_NPLZ01000015.1 Protein Homology CDS 41343 42245 . - 0 ID=cds-WP_000132877.1;Parent=gene-CCO53_RS21045;Dbxref=GenBank:WP_000132877.1;Name=WP_000132877.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=CCO53_RS21045;product=tyrosine recombinase XerC;protein_id=WP_000132877.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 42242 42949 . - . ID=gene-CCO53_RS21050;Name=CCO53_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21050;old_locus_tag=CCO53_21015 NZ_NPLZ01000015.1 Protein Homology CDS 42242 42949 . - 0 ID=cds-WP_000812763.1;Parent=gene-CCO53_RS21050;Dbxref=GenBank:WP_000812763.1;Name=WP_000812763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=CCO53_RS21050;product=DUF484 domain-containing protein;protein_id=WP_000812763.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 42946 43770 . - . ID=gene-CCO53_RS21055;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=CCO53_RS21055;old_locus_tag=CCO53_21020 NZ_NPLZ01000015.1 Protein Homology CDS 42946 43770 . - 0 ID=cds-WP_001160671.1;Parent=gene-CCO53_RS21055;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=CCO53_RS21055;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 43807 44010 . - . ID=gene-CCO53_RS21060;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=CCO53_RS21060;old_locus_tag=CCO53_21025 NZ_NPLZ01000015.1 Protein Homology CDS 43807 44010 . - 0 ID=cds-WP_000799903.1;Parent=gene-CCO53_RS21060;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=CCO53_RS21060;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 44196 44447 . + . ID=gene-CCO53_RS23860;Name=CCO53_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23860;old_locus_tag=CCO53_21030 NZ_NPLZ01000015.1 GeneMarkS-2+ CDS 44196 44447 . + 0 ID=cds-WP_001583668.1;Parent=gene-CCO53_RS23860;Dbxref=GenBank:WP_001583668.1;Name=WP_001583668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS23860;product=hypothetical protein;protein_id=WP_001583668.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq pseudogene 44417 44719 . + . ID=gene-CCO53_RS23760;Name=CCO53_RS23760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23760;old_locus_tag=CCO53_21035;partial=true;pseudo=true;start_range=.,44417 NZ_NPLZ01000015.1 Protein Homology CDS 44417 44719 . + 0 ID=cds-CCO53_RS23760;Parent=gene-CCO53_RS23760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=CCO53_RS23760;partial=true;product=hypothetical protein;pseudo=true;start_range=.,44417;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 44707 45096 . + . ID=gene-CCO53_RS21075;Name=CCO53_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21075;old_locus_tag=CCO53_21040 NZ_NPLZ01000015.1 Protein Homology CDS 44707 45096 . + 0 ID=cds-WP_001125568.1;Parent=gene-CCO53_RS21075;Dbxref=GenBank:WP_001125568.1;Name=WP_001125568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=CCO53_RS21075;product=DUF3021 family protein;protein_id=WP_001125568.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 45166 45486 . + . ID=gene-CCO53_RS21080;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=CCO53_RS21080;old_locus_tag=CCO53_21045 NZ_NPLZ01000015.1 Protein Homology CDS 45166 45486 . + 0 ID=cds-WP_001651119.1;Parent=gene-CCO53_RS21080;Dbxref=GenBank:WP_001651119.1;Name=WP_001651119.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=CCO53_RS21080;product=iron donor protein CyaY;protein_id=WP_001651119.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 45557 45919 . - . ID=gene-CCO53_RS21085;Name=CCO53_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21085;old_locus_tag=CCO53_21050 NZ_NPLZ01000015.1 Protein Homology CDS 45557 45919 . - 0 ID=cds-WP_001641751.1;Parent=gene-CCO53_RS21085;Dbxref=GenBank:WP_001641751.1;Name=WP_001641751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462828.1;locus_tag=CCO53_RS21085;product=hypothetical protein;protein_id=WP_001641751.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 45931 46473 . - . ID=gene-CCO53_RS21090;Name=CCO53_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21090;old_locus_tag=CCO53_21055 NZ_NPLZ01000015.1 Protein Homology CDS 45931 46473 . - 0 ID=cds-WP_001727010.1;Parent=gene-CCO53_RS21090;Dbxref=GenBank:WP_001727010.1;Name=WP_001727010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462827.1;locus_tag=CCO53_RS21090;product=STM3941 family protein;protein_id=WP_001727010.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 46659 47012 . - . ID=gene-CCO53_RS21095;Name=CCO53_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21095;old_locus_tag=CCO53_21060 NZ_NPLZ01000015.1 Protein Homology CDS 46659 47012 . - 0 ID=cds-WP_023242914.1;Parent=gene-CCO53_RS21095;Dbxref=GenBank:WP_023242914.1;Name=WP_023242914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462826.1;locus_tag=CCO53_RS21095;product=hypothetical protein;protein_id=WP_023242914.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 47120 49666 . - . ID=gene-CCO53_RS21100;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=CCO53_RS21100;old_locus_tag=CCO53_21065 NZ_NPLZ01000015.1 Protein Homology CDS 47120 49666 . - 0 ID=cds-WP_000281718.1;Parent=gene-CCO53_RS21100;Dbxref=GenBank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=CCO53_RS21100;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 50043 50984 . + . ID=gene-CCO53_RS21105;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CCO53_RS21105;old_locus_tag=CCO53_21070 NZ_NPLZ01000015.1 Protein Homology CDS 50043 50984 . + 0 ID=cds-WP_001521319.1;Parent=gene-CCO53_RS21105;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=CCO53_RS21105;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 50981 51721 . + . ID=gene-CCO53_RS21110;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=CCO53_RS21110;old_locus_tag=CCO53_21075 NZ_NPLZ01000015.1 Protein Homology CDS 50981 51721 . + 0 ID=cds-WP_000025494.1;Parent=gene-CCO53_RS21110;Dbxref=GenBank:WP_000025494.1;Name=WP_000025494.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=CCO53_RS21110;product=uroporphyrinogen-III synthase;protein_id=WP_000025494.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 51743 52912 . + . ID=gene-CCO53_RS21115;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=CCO53_RS21115;old_locus_tag=CCO53_21080 NZ_NPLZ01000015.1 Protein Homology CDS 51743 52912 . + 0 ID=cds-WP_000138961.1;Parent=gene-CCO53_RS21115;Dbxref=GenBank:WP_000138961.1;Name=WP_000138961.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=CCO53_RS21115;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138961.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 52915 54111 . + . ID=gene-CCO53_RS21120;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CCO53_RS21120;old_locus_tag=CCO53_21085 NZ_NPLZ01000015.1 Protein Homology CDS 52915 54111 . + 0 ID=cds-WP_001546072.1;Parent=gene-CCO53_RS21120;Dbxref=GenBank:WP_001546072.1;Name=WP_001546072.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=CCO53_RS21120;product=protoheme IX biogenesis protein HemY;protein_id=WP_001546072.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 54692 54768 . - . ID=gene-CCO53_RS21125;Name=CCO53_RS21125;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS21125;old_locus_tag=CCO53_21090 NZ_NPLZ01000015.1 tRNAscan-SE tRNA 54692 54768 . - . ID=rna-CCO53_RS21125;Parent=gene-CCO53_RS21125;anticodon=(pos:complement(54732..54734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21125;product=tRNA-Pro NZ_NPLZ01000015.1 tRNAscan-SE exon 54692 54768 . - . ID=exon-CCO53_RS21125-1;Parent=rna-CCO53_RS21125;anticodon=(pos:complement(54732..54734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21125;product=tRNA-Pro NZ_NPLZ01000015.1 RefSeq gene 54811 54897 . - . ID=gene-CCO53_RS21130;Name=CCO53_RS21130;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS21130;old_locus_tag=CCO53_21095 NZ_NPLZ01000015.1 tRNAscan-SE tRNA 54811 54897 . - . ID=rna-CCO53_RS21130;Parent=gene-CCO53_RS21130;anticodon=(pos:complement(54861..54863));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21130;product=tRNA-Leu NZ_NPLZ01000015.1 tRNAscan-SE exon 54811 54897 . - . ID=exon-CCO53_RS21130-1;Parent=rna-CCO53_RS21130;anticodon=(pos:complement(54861..54863));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21130;product=tRNA-Leu NZ_NPLZ01000015.1 RefSeq gene 54918 54993 . - . ID=gene-CCO53_RS21135;Name=CCO53_RS21135;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS21135;old_locus_tag=CCO53_21100 NZ_NPLZ01000015.1 tRNAscan-SE tRNA 54918 54993 . - . ID=rna-CCO53_RS21135;Parent=gene-CCO53_RS21135;anticodon=(pos:complement(54958..54960));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21135;product=tRNA-His NZ_NPLZ01000015.1 tRNAscan-SE exon 54918 54993 . - . ID=exon-CCO53_RS21135-1;Parent=rna-CCO53_RS21135;anticodon=(pos:complement(54958..54960));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21135;product=tRNA-His NZ_NPLZ01000015.1 RefSeq gene 55048 55124 . - . ID=gene-CCO53_RS21140;Name=CCO53_RS21140;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS21140;old_locus_tag=CCO53_21105 NZ_NPLZ01000015.1 tRNAscan-SE tRNA 55048 55124 . - . ID=rna-CCO53_RS21140;Parent=gene-CCO53_RS21140;anticodon=(pos:complement(55088..55090));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21140;product=tRNA-Arg NZ_NPLZ01000015.1 tRNAscan-SE exon 55048 55124 . - . ID=exon-CCO53_RS21140-1;Parent=rna-CCO53_RS21140;anticodon=(pos:complement(55088..55090));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21140;product=tRNA-Arg NZ_NPLZ01000015.1 RefSeq gene 55227 56612 . - . ID=gene-CCO53_RS21145;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=CCO53_RS21145;old_locus_tag=CCO53_21110 NZ_NPLZ01000015.1 Protein Homology CDS 55227 56612 . - 0 ID=cds-WP_000818378.1;Parent=gene-CCO53_RS21145;Dbxref=GenBank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=CCO53_RS21145;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818378.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 56819 57559 . - . ID=gene-CCO53_RS21150;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=CCO53_RS21150;old_locus_tag=CCO53_21115 NZ_NPLZ01000015.1 Protein Homology CDS 56819 57559 . - 0 ID=cds-WP_000183620.1;Parent=gene-CCO53_RS21150;Dbxref=GenBank:WP_000183620.1;Name=WP_000183620.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=CCO53_RS21150;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183620.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 57556 58914 . - . ID=gene-CCO53_RS21155;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=CCO53_RS21155;old_locus_tag=CCO53_21120 NZ_NPLZ01000015.1 Protein Homology CDS 57556 58914 . - 0 ID=cds-WP_000055605.1;Parent=gene-CCO53_RS21155;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=CCO53_RS21155;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 58911 59990 . - . ID=gene-CCO53_RS21160;Name=CCO53_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21160;old_locus_tag=CCO53_21125 NZ_NPLZ01000015.1 Protein Homology CDS 58911 59990 . - 0 ID=cds-WP_058331969.1;Parent=gene-CCO53_RS21160;Dbxref=GenBank:WP_058331969.1;Name=WP_058331969.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=CCO53_RS21160;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_058331969.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 59987 61237 . - . ID=gene-CCO53_RS21165;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=CCO53_RS21165;old_locus_tag=CCO53_21130 NZ_NPLZ01000015.1 Protein Homology CDS 59987 61237 . - 0 ID=cds-WP_000050291.1;Parent=gene-CCO53_RS21165;Dbxref=GenBank:WP_000050291.1;Name=WP_000050291.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=CCO53_RS21165;product=lipid III flippase WzxE;protein_id=WP_000050291.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 61239 62369 . - . ID=gene-CCO53_RS21170;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=CCO53_RS21170;old_locus_tag=CCO53_21135 NZ_NPLZ01000015.1 Protein Homology CDS 61239 62369 . - 0 ID=cds-WP_058331968.1;Parent=gene-CCO53_RS21170;Dbxref=GenBank:WP_058331968.1;Name=WP_058331968.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=CCO53_RS21170;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_058331968.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 62374 63051 . - . ID=gene-CCO53_RS21175;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=CCO53_RS21175;old_locus_tag=CCO53_21140 NZ_NPLZ01000015.1 Protein Homology CDS 62374 63051 . - 0 ID=cds-WP_001145154.1;Parent=gene-CCO53_RS21175;Dbxref=GenBank:WP_001145154.1;Name=WP_001145154.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=CCO53_RS21175;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145154.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 63029 63910 . - . ID=gene-CCO53_RS21180;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CCO53_RS21180;old_locus_tag=CCO53_21145 NZ_NPLZ01000015.1 Protein Homology CDS 63029 63910 . - 0 ID=cds-WP_000676077.1;Parent=gene-CCO53_RS21180;Dbxref=GenBank:WP_000676077.1;Name=WP_000676077.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=CCO53_RS21180;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676077.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 63943 65010 . - . ID=gene-CCO53_RS21185;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=CCO53_RS21185;old_locus_tag=CCO53_21150 NZ_NPLZ01000015.1 Protein Homology CDS 63943 65010 . - 0 ID=cds-WP_000822154.1;Parent=gene-CCO53_RS21185;Dbxref=GenBank:WP_000822154.1;Name=WP_000822154.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=CCO53_RS21185;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822154.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 65010 66272 . - . ID=gene-CCO53_RS21190;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=CCO53_RS21190;old_locus_tag=CCO53_21155 NZ_NPLZ01000015.1 Protein Homology CDS 65010 66272 . - 0 ID=cds-WP_080160479.1;Parent=gene-CCO53_RS21190;Dbxref=GenBank:WP_080160479.1;Name=WP_080160479.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=CCO53_RS21190;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_080160479.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 66269 67399 . - . ID=gene-CCO53_RS21195;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CCO53_RS21195;old_locus_tag=CCO53_21160 NZ_NPLZ01000015.1 Protein Homology CDS 66269 67399 . - 0 ID=cds-WP_000866685.1;Parent=gene-CCO53_RS21195;Dbxref=GenBank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=CCO53_RS21195;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866685.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 67455 68501 . - . ID=gene-CCO53_RS21200;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=CCO53_RS21200;old_locus_tag=CCO53_21165 NZ_NPLZ01000015.1 Protein Homology CDS 67455 68501 . - 0 ID=cds-WP_000193413.1;Parent=gene-CCO53_RS21200;Dbxref=GenBank:WP_000193413.1;Name=WP_000193413.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=CCO53_RS21200;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193413.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 68513 69616 . - . ID=gene-CCO53_RS21205;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=CCO53_RS21205;old_locus_tag=CCO53_21170 NZ_NPLZ01000015.1 Protein Homology CDS 68513 69616 . - 0 ID=cds-WP_000771937.1;Parent=gene-CCO53_RS21205;Dbxref=GenBank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=CCO53_RS21205;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 69846 71105 . - . ID=gene-CCO53_RS21210;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CCO53_RS21210;old_locus_tag=CCO53_21175 NZ_NPLZ01000015.1 Protein Homology CDS 69846 71105 . - 0 ID=cds-WP_001054532.1;Parent=gene-CCO53_RS21210;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=CCO53_RS21210;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 71193 71276 . - . ID=gene-CCO53_RS24115;Name=CCO53_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24115 NZ_NPLZ01000015.1 Protein Homology CDS 71193 71276 . - 0 ID=cds-WP_134820045.1;Parent=gene-CCO53_RS24115;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=CCO53_RS24115;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 71524 71853 . - . ID=gene-CCO53_RS21215;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CCO53_RS21215;old_locus_tag=CCO53_21180 NZ_NPLZ01000015.1 Protein Homology CDS 71524 71853 . - 0 ID=cds-WP_001280776.1;Parent=gene-CCO53_RS21215;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=CCO53_RS21215;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 71997 73262 . + . ID=gene-CCO53_RS21220;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=CCO53_RS21220;old_locus_tag=CCO53_21185 NZ_NPLZ01000015.1 Protein Homology CDS 71997 73262 . + 0 ID=cds-WP_000047525.1;Parent=gene-CCO53_RS21220;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=CCO53_RS21220;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 73381 74862 . + . ID=gene-CCO53_RS21225;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=CCO53_RS21225;old_locus_tag=CCO53_21190 NZ_NPLZ01000015.1 Protein Homology CDS 73381 74862 . + 0 ID=cds-WP_001089451.1;Parent=gene-CCO53_RS21225;Dbxref=GenBank:WP_001089451.1;Name=WP_001089451.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=CCO53_RS21225;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089451.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 74902 76926 . - . ID=gene-CCO53_RS21230;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=CCO53_RS21230;old_locus_tag=CCO53_21195 NZ_NPLZ01000015.1 Protein Homology CDS 74902 76926 . - 0 ID=cds-WP_094887823.1;Parent=gene-CCO53_RS21230;Dbxref=GenBank:WP_094887823.1;Name=WP_094887823.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=CCO53_RS21230;product=DNA helicase Rep;protein_id=WP_094887823.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq pseudogene 77026 77163 . - . ID=gene-CCO53_RS21235;Name=CCO53_RS21235;end_range=77163,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS21235;old_locus_tag=CCO53_21200;partial=true;pseudo=true NZ_NPLZ01000015.1 Protein Homology CDS 77026 77163 . - 0 ID=cds-CCO53_RS21235;Parent=gene-CCO53_RS21235;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=77163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=CCO53_RS21235;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 NZ_NPLZ01000015.1 RefSeq pseudogene 77115 77270 . - . ID=gene-CCO53_RS24280;Name=CCO53_RS24280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24280;partial=true;pseudo=true;start_range=.,77115 NZ_NPLZ01000015.1 Protein Homology CDS 77115 77270 . - 0 ID=cds-CCO53_RS24280;Parent=gene-CCO53_RS24280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=CCO53_RS24280;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;start_range=.,77115;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 77464 77745 . + . ID=gene-CCO53_RS21245;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=CCO53_RS21245;old_locus_tag=CCO53_21210 NZ_NPLZ01000015.1 Protein Homology CDS 77464 77745 . + 0 ID=cds-WP_001096806.1;Parent=gene-CCO53_RS21245;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=CCO53_RS21245;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 77837 79312 . - . ID=gene-CCO53_RS21250;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CCO53_RS21250;old_locus_tag=CCO53_21215 NZ_NPLZ01000015.1 Protein Homology CDS 77837 79312 . - 0 ID=cds-WP_000024943.1;Parent=gene-CCO53_RS21250;Dbxref=GenBank:WP_000024943.1;Name=WP_000024943.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=CCO53_RS21250;product=ketol-acid reductoisomerase;protein_id=WP_000024943.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 79476 80363 . + . ID=gene-CCO53_RS21255;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=CCO53_RS21255;old_locus_tag=CCO53_21220 NZ_NPLZ01000015.1 Protein Homology CDS 79476 80363 . + 0 ID=cds-WP_000365798.1;Parent=gene-CCO53_RS21255;Dbxref=GenBank:WP_000365798.1;Name=WP_000365798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=CCO53_RS21255;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 80366 80707 . - . ID=gene-CCO53_RS21260;Name=CCO53_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21260;old_locus_tag=CCO53_21225 NZ_NPLZ01000015.1 Protein Homology CDS 80366 80707 . - 0 ID=cds-WP_000560822.1;Parent=gene-CCO53_RS21260;Dbxref=GenBank:WP_000560822.1;Name=WP_000560822.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=CCO53_RS21260;product=helix-turn-helix domain-containing protein;protein_id=WP_000560822.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 80704 81021 . - . ID=gene-CCO53_RS21265;Name=CCO53_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21265;old_locus_tag=CCO53_21230 NZ_NPLZ01000015.1 Protein Homology CDS 80704 81021 . - 0 ID=cds-WP_000535852.1;Parent=gene-CCO53_RS21265;Dbxref=GenBank:WP_000535852.1;Name=WP_000535852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=CCO53_RS21265;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000535852.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 81304 82848 . - . ID=gene-CCO53_RS21270;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CCO53_RS21270;old_locus_tag=CCO53_21235 NZ_NPLZ01000015.1 Protein Homology CDS 81304 82848 . - 0 ID=cds-WP_001518457.1;Parent=gene-CCO53_RS21270;Dbxref=GenBank:WP_001518457.1;Name=WP_001518457.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=CCO53_RS21270;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001518457.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 82851 84701 . - . ID=gene-CCO53_RS21275;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO53_RS21275;old_locus_tag=CCO53_21240 NZ_NPLZ01000015.1 Protein Homology CDS 82851 84701 . - 0 ID=cds-WP_039591110.1;Parent=gene-CCO53_RS21275;Dbxref=GenBank:WP_039591110.1;Name=WP_039591110.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=CCO53_RS21275;product=dihydroxy-acid dehydratase;protein_id=WP_039591110.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 84861 85790 . - . ID=gene-CCO53_RS21280;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=CCO53_RS21280;old_locus_tag=CCO53_21245 NZ_NPLZ01000015.1 Protein Homology CDS 84861 85790 . - 0 ID=cds-WP_000208532.1;Parent=gene-CCO53_RS21280;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=CCO53_RS21280;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 85808 86071 . - . ID=gene-CCO53_RS21285;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=CCO53_RS21285;old_locus_tag=CCO53_21250 NZ_NPLZ01000015.1 Protein Homology CDS 85808 86071 . - 0 ID=cds-WP_000983260.1;Parent=gene-CCO53_RS21285;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=CCO53_RS21285;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 86068 87714 . - . ID=gene-CCO53_RS21290;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=CCO53_RS21290;old_locus_tag=CCO53_21255 NZ_NPLZ01000015.1 Protein Homology CDS 86068 87714 . - 0 ID=cds-WP_001012555.1;Parent=gene-CCO53_RS21290;Dbxref=GenBank:WP_001012555.1;Name=WP_001012555.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=CCO53_RS21290;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012555.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 87717 87767 . - . ID=gene-CCO53_RS23900;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=CCO53_RS23900 NZ_NPLZ01000015.1 Protein Homology CDS 87717 87767 . - 0 ID=cds-WP_192930503.1;Parent=gene-CCO53_RS23900;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=CCO53_RS23900;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 87854 87952 . - . ID=gene-CCO53_RS21295;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=CCO53_RS21295;old_locus_tag=CCO53_21260 NZ_NPLZ01000015.1 Protein Homology CDS 87854 87952 . - 0 ID=cds-WP_001311244.1;Parent=gene-CCO53_RS21295;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=CCO53_RS21295;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 88304 89824 . + . ID=gene-CCO53_RS21305;Name=CCO53_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21305;old_locus_tag=CCO53_21270 NZ_NPLZ01000015.1 Protein Homology CDS 88304 89824 . + 0 ID=cds-WP_000050215.1;Parent=gene-CCO53_RS21305;Dbxref=GenBank:WP_000050215.1;Name=WP_000050215.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=CCO53_RS21305;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000050215.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 89849 90187 . - . ID=gene-CCO53_RS21310;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=CCO53_RS21310;old_locus_tag=CCO53_21275 NZ_NPLZ01000015.1 Protein Homology CDS 89849 90187 . - 0 ID=cds-WP_000840996.1;Parent=gene-CCO53_RS21310;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=CCO53_RS21310;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 90294 91142 . + . ID=gene-CCO53_RS21315;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=CCO53_RS21315;old_locus_tag=CCO53_21280 NZ_NPLZ01000015.1 Protein Homology CDS 90294 91142 . + 0 ID=cds-WP_001541181.1;Parent=gene-CCO53_RS21315;Dbxref=GenBank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=CCO53_RS21315;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11 NZ_NPLZ01000015.1 RefSeq gene 91244 91319 . - . ID=gene-CCO53_RS21320;Name=CCO53_RS21320;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS21320;old_locus_tag=CCO53_21285 NZ_NPLZ01000015.1 tRNAscan-SE tRNA 91244 91319 . - . ID=rna-CCO53_RS21320;Parent=gene-CCO53_RS21320;anticodon=(pos:complement(91284..91286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21320;product=tRNA-Trp NZ_NPLZ01000015.1 tRNAscan-SE exon 91244 91319 . - . ID=exon-CCO53_RS21320-1;Parent=rna-CCO53_RS21320;anticodon=(pos:complement(91284..91286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21320;product=tRNA-Trp NZ_NPLZ01000015.1 RefSeq gene 91328 91404 . - . ID=gene-CCO53_RS21325;Name=CCO53_RS21325;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS21325;old_locus_tag=CCO53_21290 NZ_NPLZ01000015.1 tRNAscan-SE tRNA 91328 91404 . - . ID=rna-CCO53_RS21325;Parent=gene-CCO53_RS21325;anticodon=(pos:complement(91368..91370));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21325;product=tRNA-Asp NZ_NPLZ01000015.1 tRNAscan-SE exon 91328 91404 . - . ID=exon-CCO53_RS21325-1;Parent=rna-CCO53_RS21325;anticodon=(pos:complement(91368..91370));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS21325;product=tRNA-Asp NZ_NPLZ01000015.1 RefSeq gene 91459 91574 . - . ID=gene-CCO53_RS21330;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO53_RS21330;old_locus_tag=CCO53_21295 NZ_NPLZ01000015.1 cmsearch rRNA 91459 91574 . - . ID=rna-CCO53_RS21330;Parent=gene-CCO53_RS21330;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS21330;product=5S ribosomal RNA NZ_NPLZ01000015.1 cmsearch exon 91459 91574 . - . ID=exon-CCO53_RS21330-1;Parent=rna-CCO53_RS21330;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS21330;product=5S ribosomal RNA ##sequence-region NZ_NPLZ01000016.1 1 85947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000016.1 RefSeq region 1 85947 . + . ID=NZ_NPLZ01000016.1:1..85947;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000016.1 RefSeq gene 119 234 . + . ID=gene-CCO53_RS21335;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO53_RS21335;old_locus_tag=CCO53_21300 NZ_NPLZ01000016.1 cmsearch rRNA 119 234 . + . ID=rna-CCO53_RS21335;Parent=gene-CCO53_RS21335;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS21335;product=5S ribosomal RNA NZ_NPLZ01000016.1 cmsearch exon 119 234 . + . ID=exon-CCO53_RS21335-1;Parent=rna-CCO53_RS21335;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS21335;product=5S ribosomal RNA NZ_NPLZ01000016.1 RefSeq gene 399 836 . - . ID=gene-CCO53_RS21340;Name=CCO53_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21340;old_locus_tag=CCO53_21305 NZ_NPLZ01000016.1 Protein Homology CDS 399 836 . - 0 ID=cds-WP_000973248.1;Parent=gene-CCO53_RS21340;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=CCO53_RS21340;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 993 1922 . + . ID=gene-CCO53_RS21345;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=CCO53_RS21345;old_locus_tag=CCO53_21310 NZ_NPLZ01000016.1 Protein Homology CDS 993 1922 . + 0 ID=cds-WP_001122767.1;Parent=gene-CCO53_RS21345;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=CCO53_RS21345;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 2190 3791 . + . ID=gene-CCO53_RS21350;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=CCO53_RS21350;old_locus_tag=CCO53_21315 NZ_NPLZ01000016.1 Protein Homology CDS 2190 3791 . + 0 ID=cds-WP_001069371.1;Parent=gene-CCO53_RS21350;Dbxref=GenBank:WP_001069371.1;Name=WP_001069371.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=CCO53_RS21350;product=malate synthase A;protein_id=WP_001069371.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 3823 5127 . + . ID=gene-CCO53_RS21355;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=CCO53_RS21355;old_locus_tag=CCO53_21320 NZ_NPLZ01000016.1 Protein Homology CDS 3823 5127 . + 0 ID=cds-WP_000857882.1;Parent=gene-CCO53_RS21355;Dbxref=GenBank:WP_000857882.1;Name=WP_000857882.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=CCO53_RS21355;product=isocitrate lyase;protein_id=WP_000857882.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 5229 6980 . + . ID=gene-CCO53_RS21360;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=CCO53_RS21360;old_locus_tag=CCO53_21325 NZ_NPLZ01000016.1 Protein Homology CDS 5229 6980 . + 0 ID=cds-WP_094887824.1;Parent=gene-CCO53_RS21360;Dbxref=GenBank:WP_094887824.1;Name=WP_094887824.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=CCO53_RS21360;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_094887824.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 6944 7351 . - . ID=gene-CCO53_RS21365;Name=CCO53_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21365;old_locus_tag=CCO53_21330 NZ_NPLZ01000016.1 Protein Homology CDS 6944 7351 . - 0 ID=cds-WP_010989091.1;Parent=gene-CCO53_RS21365;Dbxref=GenBank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=CCO53_RS21365;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 7362 8186 . - . ID=gene-CCO53_RS21370;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=CCO53_RS21370;old_locus_tag=CCO53_21335 NZ_NPLZ01000016.1 Protein Homology CDS 7362 8186 . - 0 ID=cds-WP_000226434.1;Parent=gene-CCO53_RS21370;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=CCO53_RS21370;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 8491 12174 . + . ID=gene-CCO53_RS21375;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=CCO53_RS21375;old_locus_tag=CCO53_21340 NZ_NPLZ01000016.1 Protein Homology CDS 8491 12174 . + 0 ID=cds-WP_094887825.1;Parent=gene-CCO53_RS21375;Dbxref=GenBank:WP_094887825.1;Name=WP_094887825.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=CCO53_RS21375;product=methionine synthase;protein_id=WP_094887825.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 12441 14072 . + . ID=gene-CCO53_RS21380;Name=CCO53_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21380;old_locus_tag=CCO53_21345 NZ_NPLZ01000016.1 Protein Homology CDS 12441 14072 . + 0 ID=cds-WP_000956811.1;Parent=gene-CCO53_RS21380;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=CCO53_RS21380;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 14148 14837 . - . ID=gene-CCO53_RS21385;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=CCO53_RS21385;old_locus_tag=CCO53_21350 NZ_NPLZ01000016.1 Protein Homology CDS 14148 14837 . - 0 ID=cds-WP_000421776.1;Parent=gene-CCO53_RS21385;Dbxref=GenBank:WP_000421776.1;Name=WP_000421776.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=CCO53_RS21385;product=dipeptidase PepE;protein_id=WP_000421776.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 14909 15010 . + . ID=gene-CCO53_RS21390;Name=CCO53_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21390;old_locus_tag=CCO53_21355 NZ_NPLZ01000016.1 Protein Homology CDS 14909 15010 . + 0 ID=cds-WP_058331887.1;Parent=gene-CCO53_RS21390;Dbxref=GenBank:WP_058331887.1;Name=WP_058331887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=CCO53_RS21390;product=hypothetical protein;protein_id=WP_058331887.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 15045 15584 . + . ID=gene-CCO53_RS21395;Name=CCO53_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21395;old_locus_tag=CCO53_21360 NZ_NPLZ01000016.1 Protein Homology CDS 15045 15584 . + 0 ID=cds-WP_001096724.1;Parent=gene-CCO53_RS21395;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=CCO53_RS21395;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 15631 16500 . + . ID=gene-CCO53_RS21400;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=CCO53_RS21400;old_locus_tag=CCO53_21365 NZ_NPLZ01000016.1 Protein Homology CDS 15631 16500 . + 0 ID=cds-WP_000954618.1;Parent=gene-CCO53_RS21400;Dbxref=GenBank:WP_000954618.1;Name=WP_000954618.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=CCO53_RS21400;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954618.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 16497 16769 . - . ID=gene-CCO53_RS21405;Name=CCO53_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21405;old_locus_tag=CCO53_21370 NZ_NPLZ01000016.1 Protein Homology CDS 16497 16769 . - 0 ID=cds-WP_001534518.1;Parent=gene-CCO53_RS21405;Dbxref=GenBank:WP_001534518.1;Name=WP_001534518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=CCO53_RS21405;product=DUF3811 domain-containing protein;protein_id=WP_001534518.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 17015 17956 . - . ID=gene-CCO53_RS21415;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=CCO53_RS21415;old_locus_tag=CCO53_21380 NZ_NPLZ01000016.1 Protein Homology CDS 17015 17956 . - 0 ID=cds-WP_000881647.1;Parent=gene-CCO53_RS21415;Dbxref=GenBank:WP_000881647.1;Name=WP_000881647.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=CCO53_RS21415;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_000881647.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq pseudogene 18218 18945 . - . ID=gene-CCO53_RS21420;Name=CCO53_RS21420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS21420;old_locus_tag=CCO53_21385;pseudo=true NZ_NPLZ01000016.1 Protein Homology CDS 18218 18945 . - 0 ID=cds-CCO53_RS21420;Parent=gene-CCO53_RS21420;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=CCO53_RS21420;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000016.1 RefSeq pseudogene 19142 19432 . - . ID=gene-CCO53_RS21425;Name=CCO53_RS21425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS21425;old_locus_tag=CCO53_21390;pseudo=true NZ_NPLZ01000016.1 Protein Homology CDS 19142 19432 . - 0 ID=cds-CCO53_RS21425;Parent=gene-CCO53_RS21425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=CCO53_RS21425;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 19684 20139 . - . ID=gene-CCO53_RS21430;Name=CCO53_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21430;old_locus_tag=CCO53_21395 NZ_NPLZ01000016.1 Protein Homology CDS 19684 20139 . - 0 ID=cds-WP_023201686.1;Parent=gene-CCO53_RS21430;Dbxref=GenBank:WP_023201686.1;Name=WP_023201686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=CCO53_RS21430;product=hypothetical protein;protein_id=WP_023201686.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 20136 20750 . - . ID=gene-CCO53_RS21435;Name=CCO53_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21435;old_locus_tag=CCO53_21400 NZ_NPLZ01000016.1 Protein Homology CDS 20136 20750 . - 0 ID=cds-WP_023201685.1;Parent=gene-CCO53_RS21435;Dbxref=GenBank:WP_023201685.1;Name=WP_023201685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151757.1;locus_tag=CCO53_RS21435;product=DUF4376 domain-containing protein;protein_id=WP_023201685.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 20757 22364 . - . ID=gene-CCO53_RS21440;Name=CCO53_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21440;old_locus_tag=CCO53_21405 NZ_NPLZ01000016.1 Protein Homology CDS 20757 22364 . - 0 ID=cds-WP_053299988.1;Parent=gene-CCO53_RS21440;Dbxref=GenBank:WP_053299988.1;Name=WP_053299988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894561.1;locus_tag=CCO53_RS21440;product=phage tail protein;protein_id=WP_053299988.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 22367 22999 . - . ID=gene-CCO53_RS21445;Name=CCO53_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21445;old_locus_tag=CCO53_21410 NZ_NPLZ01000016.1 Protein Homology CDS 22367 22999 . - 0 ID=cds-WP_023201684.1;Parent=gene-CCO53_RS21445;Dbxref=GenBank:WP_023201684.1;Name=WP_023201684.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=CCO53_RS21445;product=phage tail protein I;protein_id=WP_023201684.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 22992 24107 . - . ID=gene-CCO53_RS21450;Name=CCO53_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21450;old_locus_tag=CCO53_21415 NZ_NPLZ01000016.1 Protein Homology CDS 22992 24107 . - 0 ID=cds-WP_023138096.1;Parent=gene-CCO53_RS21450;Dbxref=GenBank:WP_023138096.1;Name=WP_023138096.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=CCO53_RS21450;product=baseplate assembly protein;protein_id=WP_023138096.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 24098 24457 . - . ID=gene-CCO53_RS21455;Name=CCO53_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21455;old_locus_tag=CCO53_21420 NZ_NPLZ01000016.1 Protein Homology CDS 24098 24457 . - 0 ID=cds-WP_001093501.1;Parent=gene-CCO53_RS21455;Dbxref=GenBank:WP_001093501.1;Name=WP_001093501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=CCO53_RS21455;product=GPW/gp25 family protein;protein_id=WP_001093501.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 24556 25278 . - . ID=gene-CCO53_RS21460;Name=CCO53_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21460;old_locus_tag=CCO53_21425 NZ_NPLZ01000016.1 Protein Homology CDS 24556 25278 . - 0 ID=cds-WP_023201683.1;Parent=gene-CCO53_RS21460;Dbxref=GenBank:WP_023201683.1;Name=WP_023201683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=CCO53_RS21460;product=phage baseplate assembly protein V;protein_id=WP_023201683.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 25288 26331 . - . ID=gene-CCO53_RS21465;Name=CCO53_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21465;old_locus_tag=CCO53_21430 NZ_NPLZ01000016.1 Protein Homology CDS 25288 26331 . - 0 ID=cds-WP_023201682.1;Parent=gene-CCO53_RS21465;Dbxref=GenBank:WP_023201682.1;Name=WP_023201682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=CCO53_RS21465;product=phage late control D family protein;protein_id=WP_023201682.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 26319 26528 . - . ID=gene-CCO53_RS21470;Name=CCO53_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21470;old_locus_tag=CCO53_21435 NZ_NPLZ01000016.1 Protein Homology CDS 26319 26528 . - 0 ID=cds-WP_023201681.1;Parent=gene-CCO53_RS21470;Dbxref=GenBank:WP_023201681.1;Name=WP_023201681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=CCO53_RS21470;product=tail protein X;protein_id=WP_023201681.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 26528 27481 . - . ID=gene-CCO53_RS21475;Name=CCO53_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21475;old_locus_tag=CCO53_21440 NZ_NPLZ01000016.1 Protein Homology CDS 26528 27481 . - 0 ID=cds-WP_023201680.1;Parent=gene-CCO53_RS21475;Dbxref=GenBank:WP_023201680.1;Name=WP_023201680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=CCO53_RS21475;product=phage tail protein;protein_id=WP_023201680.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 27481 29847 . - . ID=gene-CCO53_RS21480;Name=CCO53_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21480;old_locus_tag=CCO53_21445 NZ_NPLZ01000016.1 Protein Homology CDS 27481 29847 . - 0 ID=cds-WP_094887826.1;Parent=gene-CCO53_RS21480;Dbxref=GenBank:WP_094887826.1;Name=WP_094887826.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=CCO53_RS21480;product=phage tail tape measure protein;protein_id=WP_094887826.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 29941 30069 . - . ID=gene-CCO53_RS24285;Name=CCO53_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24285;old_locus_tag=CCO53_21450 NZ_NPLZ01000016.1 Protein Homology CDS 29941 30069 . - 0 ID=cds-WP_001185654.1;Parent=gene-CCO53_RS24285;Dbxref=GenBank:WP_001185654.1;Name=WP_001185654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=CCO53_RS24285;product=GpE family phage tail protein;protein_id=WP_001185654.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 30029 30346 . - . ID=gene-CCO53_RS21490;Name=CCO53_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21490;old_locus_tag=CCO53_21455 NZ_NPLZ01000016.1 Protein Homology CDS 30029 30346 . - 0 ID=cds-WP_023201678.1;Parent=gene-CCO53_RS21490;Dbxref=GenBank:WP_023201678.1;Name=WP_023201678.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=CCO53_RS21490;product=phage tail assembly protein;protein_id=WP_023201678.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 30398 30922 . - . ID=gene-CCO53_RS21495;Name=CCO53_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21495;old_locus_tag=CCO53_21460 NZ_NPLZ01000016.1 Protein Homology CDS 30398 30922 . - 0 ID=cds-WP_000907494.1;Parent=gene-CCO53_RS21495;Dbxref=GenBank:WP_000907494.1;Name=WP_000907494.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=CCO53_RS21495;product=phage major tail tube protein;protein_id=WP_000907494.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 30922 32349 . - . ID=gene-CCO53_RS21500;Name=CCO53_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21500;old_locus_tag=CCO53_21465 NZ_NPLZ01000016.1 Protein Homology CDS 30922 32349 . - 0 ID=cds-WP_023201677.1;Parent=gene-CCO53_RS21500;Dbxref=GenBank:WP_023201677.1;Name=WP_023201677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=CCO53_RS21500;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_023201677.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 32339 32536 . - . ID=gene-CCO53_RS21505;Name=CCO53_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21505;old_locus_tag=CCO53_21470 NZ_NPLZ01000016.1 Protein Homology CDS 32339 32536 . - 0 ID=cds-WP_023201676.1;Parent=gene-CCO53_RS21505;Dbxref=GenBank:WP_023201676.1;Name=WP_023201676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=CCO53_RS21505;product=hypothetical protein;protein_id=WP_023201676.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 32533 32988 . - . ID=gene-CCO53_RS21510;Name=CCO53_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21510;old_locus_tag=CCO53_21475 NZ_NPLZ01000016.1 Protein Homology CDS 32533 32988 . - 0 ID=cds-WP_023201675.1;Parent=gene-CCO53_RS21510;Dbxref=GenBank:WP_023201675.1;Name=WP_023201675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=CCO53_RS21510;product=Gp37 family protein;protein_id=WP_023201675.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 33147 33461 . - . ID=gene-CCO53_RS21515;Name=CCO53_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21515;old_locus_tag=CCO53_21480 NZ_NPLZ01000016.1 Protein Homology CDS 33147 33461 . - 0 ID=cds-WP_000777269.1;Parent=gene-CCO53_RS21515;Dbxref=GenBank:WP_000777269.1;Name=WP_000777269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000777269.1;locus_tag=CCO53_RS21515;product=hypothetical protein;protein_id=WP_000777269.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 33474 34079 . - . ID=gene-CCO53_RS21520;Name=CCO53_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21520;old_locus_tag=CCO53_21485 NZ_NPLZ01000016.1 Protein Homology CDS 33474 34079 . - 0 ID=cds-WP_023201674.1;Parent=gene-CCO53_RS21520;Dbxref=GenBank:WP_023201674.1;Name=WP_023201674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=CCO53_RS21520;product=lytic transglycosylase domain-containing protein;protein_id=WP_023201674.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 34082 34369 . - . ID=gene-CCO53_RS21525;Name=CCO53_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21525;old_locus_tag=CCO53_21490 NZ_NPLZ01000016.1 Protein Homology CDS 34082 34369 . - 0 ID=cds-WP_001226439.1;Parent=gene-CCO53_RS21525;Dbxref=GenBank:WP_001226439.1;Name=WP_001226439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=CCO53_RS21525;product=putative holin;protein_id=WP_001226439.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 34946 35293 . + . ID=gene-CCO53_RS21530;Name=CCO53_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21530;old_locus_tag=CCO53_21495 NZ_NPLZ01000016.1 Protein Homology CDS 34946 35293 . + 0 ID=cds-WP_000615248.1;Parent=gene-CCO53_RS21530;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=CCO53_RS21530;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 35424 36773 . - . ID=gene-CCO53_RS21535;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO53_RS21535;old_locus_tag=CCO53_21500 NZ_NPLZ01000016.1 Protein Homology CDS 35424 36773 . - 0 ID=cds-WP_000136392.1;Parent=gene-CCO53_RS21535;Dbxref=GenBank:WP_000136392.1;Name=WP_000136392.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=CCO53_RS21535;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136392.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 37161 38810 . + . ID=gene-CCO53_RS21540;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=CCO53_RS21540;old_locus_tag=CCO53_21505 NZ_NPLZ01000016.1 Protein Homology CDS 37161 38810 . + 0 ID=cds-WP_000790040.1;Parent=gene-CCO53_RS21540;Dbxref=GenBank:WP_000790040.1;Name=WP_000790040.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=CCO53_RS21540;product=glucose-6-phosphate isomerase;protein_id=WP_000790040.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 39254 39496 . + . ID=gene-CCO53_RS21545;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=CCO53_RS21545;old_locus_tag=CCO53_21510 NZ_NPLZ01000016.1 Protein Homology CDS 39254 39496 . + 0 ID=cds-WP_001541297.1;Parent=gene-CCO53_RS21545;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=CCO53_RS21545;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 39560 40198 . + . ID=gene-CCO53_RS21550;Name=CCO53_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21550;old_locus_tag=CCO53_21515 NZ_NPLZ01000016.1 Protein Homology CDS 39560 40198 . + 0 ID=cds-WP_000824801.1;Parent=gene-CCO53_RS21550;Dbxref=GenBank:WP_000824801.1;Name=WP_000824801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=CCO53_RS21550;product=YjbF family lipoprotein;protein_id=WP_000824801.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 40195 40932 . + . ID=gene-CCO53_RS21555;Name=CCO53_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21555;old_locus_tag=CCO53_21520 NZ_NPLZ01000016.1 Protein Homology CDS 40195 40932 . + 0 ID=cds-WP_094887827.1;Parent=gene-CCO53_RS21555;Dbxref=GenBank:WP_094887827.1;Name=WP_094887827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=CCO53_RS21555;product=capsule biosynthesis GfcC family protein;protein_id=WP_094887827.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 40932 43028 . + . ID=gene-CCO53_RS21560;Name=CCO53_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21560;old_locus_tag=CCO53_21525 NZ_NPLZ01000016.1 Protein Homology CDS 40932 43028 . + 0 ID=cds-WP_061372219.1;Parent=gene-CCO53_RS21560;Dbxref=GenBank:WP_061372219.1;Name=WP_061372219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=CCO53_RS21560;product=YjbH domain-containing protein;protein_id=WP_061372219.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 43172 43582 . + . ID=gene-CCO53_RS21565;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=CCO53_RS21565;old_locus_tag=CCO53_21530 NZ_NPLZ01000016.1 Protein Homology CDS 43172 43582 . + 0 ID=cds-WP_000982749.1;Parent=gene-CCO53_RS21565;Dbxref=GenBank:WP_000982749.1;Name=WP_000982749.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=CCO53_RS21565;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982749.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 43748 44638 . - . ID=gene-CCO53_RS21570;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=CCO53_RS21570;old_locus_tag=CCO53_21535 NZ_NPLZ01000016.1 Protein Homology CDS 43748 44638 . - 0 ID=cds-WP_001252085.1;Parent=gene-CCO53_RS21570;Dbxref=GenBank:WP_001252085.1;Name=WP_001252085.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=CCO53_RS21570;product=maltose ABC transporter permease MalG;protein_id=WP_001252085.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 44653 46197 . - . ID=gene-CCO53_RS21575;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=CCO53_RS21575;old_locus_tag=CCO53_21540 NZ_NPLZ01000016.1 Protein Homology CDS 44653 46197 . - 0 ID=cds-WP_061372217.1;Parent=gene-CCO53_RS21575;Dbxref=GenBank:WP_061372217.1;Name=WP_061372217.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=CCO53_RS21575;product=maltose ABC transporter permease MalF;protein_id=WP_061372217.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq pseudogene 46240 46380 . + . ID=gene-CCO53_RS24450;Name=CCO53_RS24450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24450;partial=true;pseudo=true;start_range=.,46240 NZ_NPLZ01000016.1 Protein Homology CDS 46240 46380 . + 0 ID=cds-CCO53_RS24450;Parent=gene-CCO53_RS24450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO53_RS24450;partial=true;product=hypothetical protein;pseudo=true;start_range=.,46240;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 46329 47519 . - . ID=gene-CCO53_RS21580;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=CCO53_RS21580;old_locus_tag=CCO53_21545 NZ_NPLZ01000016.1 Protein Homology CDS 46329 47519 . - 0 ID=cds-WP_000695415.1;Parent=gene-CCO53_RS21580;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=CCO53_RS21580;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 47881 48990 . + . ID=gene-CCO53_RS21585;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=CCO53_RS21585;old_locus_tag=CCO53_21550 NZ_NPLZ01000016.1 Protein Homology CDS 47881 48990 . + 0 ID=cds-WP_000179176.1;Parent=gene-CCO53_RS21585;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=CCO53_RS21585;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 49079 50437 . + . ID=gene-CCO53_RS21590;Name=CCO53_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21590;old_locus_tag=CCO53_21555 NZ_NPLZ01000016.1 Protein Homology CDS 49079 50437 . + 0 ID=cds-WP_000973681.1;Parent=gene-CCO53_RS21590;Dbxref=GenBank:WP_000973681.1;Name=WP_000973681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=CCO53_RS21590;product=maltoporin;protein_id=WP_000973681.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 50601 51518 . + . ID=gene-CCO53_RS21595;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=CCO53_RS21595;old_locus_tag=CCO53_21560 NZ_NPLZ01000016.1 Protein Homology CDS 50601 51518 . + 0 ID=cds-WP_000782497.1;Parent=gene-CCO53_RS21595;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=CCO53_RS21595;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 51699 52196 . + . ID=gene-CCO53_RS21600;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=CCO53_RS21600;old_locus_tag=CCO53_21565 NZ_NPLZ01000016.1 Protein Homology CDS 51699 52196 . + 0 ID=cds-WP_000019219.1;Parent=gene-CCO53_RS21600;Dbxref=GenBank:WP_000019219.1;Name=WP_000019219.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=CCO53_RS21600;product=chorismate lyase;protein_id=WP_000019219.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 52210 53082 . + . ID=gene-CCO53_RS21605;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=CCO53_RS21605;old_locus_tag=CCO53_21570 NZ_NPLZ01000016.1 Protein Homology CDS 52210 53082 . + 0 ID=cds-WP_000455249.1;Parent=gene-CCO53_RS21605;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=CCO53_RS21605;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 53181 55601 . - . ID=gene-CCO53_RS21610;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=CCO53_RS21610;old_locus_tag=CCO53_21575 NZ_NPLZ01000016.1 Protein Homology CDS 53181 55601 . - 0 ID=cds-WP_000017360.1;Parent=gene-CCO53_RS21610;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=CCO53_RS21610;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 55772 56140 . + . ID=gene-CCO53_RS21615;Name=CCO53_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21615;old_locus_tag=CCO53_21580 NZ_NPLZ01000016.1 Protein Homology CDS 55772 56140 . + 0 ID=cds-WP_094887828.1;Parent=gene-CCO53_RS21615;Dbxref=GenBank:WP_094887828.1;Name=WP_094887828.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=CCO53_RS21615;product=diacylglycerol kinase;protein_id=WP_094887828.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 56249 56857 . + . ID=gene-CCO53_RS21620;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CCO53_RS21620;old_locus_tag=CCO53_21585 NZ_NPLZ01000016.1 Protein Homology CDS 56249 56857 . + 0 ID=cds-WP_000646079.1;Parent=gene-CCO53_RS21620;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=CCO53_RS21620;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 57036 58361 . + . ID=gene-CCO53_RS21625;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=CCO53_RS21625;old_locus_tag=CCO53_21590 NZ_NPLZ01000016.1 Protein Homology CDS 57036 58361 . + 0 ID=cds-WP_058331891.1;Parent=gene-CCO53_RS21625;Dbxref=GenBank:WP_058331891.1;Name=WP_058331891.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=CCO53_RS21625;product=MATE family efflux transporter DinF;protein_id=WP_058331891.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 58358 58471 . + . ID=gene-CCO53_RS21630;Name=CCO53_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21630;old_locus_tag=CCO53_21595 NZ_NPLZ01000016.1 Protein Homology CDS 58358 58471 . + 0 ID=cds-WP_001575282.1;Parent=gene-CCO53_RS21630;Dbxref=GenBank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=CCO53_RS21630;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 58493 58702 . + . ID=gene-CCO53_RS21635;Name=CCO53_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21635;old_locus_tag=CCO53_21600 NZ_NPLZ01000016.1 Protein Homology CDS 58493 58702 . + 0 ID=cds-WP_001030592.1;Parent=gene-CCO53_RS21635;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=CCO53_RS21635;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 58801 59316 . - . ID=gene-CCO53_RS21640;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=CCO53_RS21640;old_locus_tag=CCO53_21605 NZ_NPLZ01000016.1 Protein Homology CDS 58801 59316 . - 0 ID=cds-WP_000416271.1;Parent=gene-CCO53_RS21640;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=CCO53_RS21640;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 59563 60873 . + . ID=gene-CCO53_RS21645;Name=CCO53_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21645;old_locus_tag=CCO53_21610 NZ_NPLZ01000016.1 Protein Homology CDS 59563 60873 . + 0 ID=cds-WP_001039337.1;Parent=gene-CCO53_RS21645;Dbxref=GenBank:WP_001039337.1;Name=WP_001039337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=CCO53_RS21645;product=conjugal transfer protein TraF;protein_id=WP_001039337.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 60961 61959 . + . ID=gene-CCO53_RS21650;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=CCO53_RS21650;old_locus_tag=CCO53_21615 NZ_NPLZ01000016.1 Protein Homology CDS 60961 61959 . + 0 ID=cds-WP_001825318.1;Parent=gene-CCO53_RS21650;Dbxref=GenBank:WP_001825318.1;Name=WP_001825318.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=CCO53_RS21650;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001825318.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 62127 62369 . + . ID=gene-CCO53_RS21655;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=CCO53_RS21655;old_locus_tag=CCO53_21620 NZ_NPLZ01000016.1 Protein Homology CDS 62127 62369 . + 0 ID=cds-WP_000891414.1;Parent=gene-CCO53_RS21655;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=CCO53_RS21655;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 62544 63527 . - . ID=gene-CCO53_RS21660;Name=CCO53_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21660;old_locus_tag=CCO53_21625 NZ_NPLZ01000016.1 Protein Homology CDS 62544 63527 . - 0 ID=cds-WP_000235555.1;Parent=gene-CCO53_RS21660;Dbxref=GenBank:WP_000235555.1;Name=WP_000235555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=CCO53_RS21660;product=quinone oxidoreductase;protein_id=WP_000235555.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 63592 65007 . + . ID=gene-CCO53_RS21665;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CCO53_RS21665;old_locus_tag=CCO53_21630 NZ_NPLZ01000016.1 Protein Homology CDS 63592 65007 . + 0 ID=cds-WP_000918353.1;Parent=gene-CCO53_RS21665;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=CCO53_RS21665;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 65039 66118 . + . ID=gene-CCO53_RS21670;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CCO53_RS21670;old_locus_tag=CCO53_21635 NZ_NPLZ01000016.1 Protein Homology CDS 65039 66118 . + 0 ID=cds-WP_001147296.1;Parent=gene-CCO53_RS21670;Dbxref=GenBank:WP_001147296.1;Name=WP_001147296.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=CCO53_RS21670;product=alanine racemase;protein_id=WP_001147296.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 66304 67497 . + . ID=gene-CCO53_RS21680;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=CCO53_RS21680;old_locus_tag=CCO53_21645 NZ_NPLZ01000016.1 Protein Homology CDS 66304 67497 . + 0 ID=cds-WP_000486910.1;Parent=gene-CCO53_RS21680;Dbxref=GenBank:WP_000486910.1;Name=WP_000486910.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=CCO53_RS21680;product=aromatic amino acid transaminase;protein_id=WP_000486910.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 67684 68397 . + . ID=gene-CCO53_RS21685;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=CCO53_RS21685;old_locus_tag=CCO53_21650 NZ_NPLZ01000016.1 Protein Homology CDS 67684 68397 . + 0 ID=cds-WP_000724435.1;Parent=gene-CCO53_RS21685;Dbxref=GenBank:WP_000724435.1;Name=WP_000724435.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=CCO53_RS21685;product=acid phosphatase AphA;protein_id=WP_000724435.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 68526 68942 . + . ID=gene-CCO53_RS21690;Name=CCO53_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21690;old_locus_tag=CCO53_21655 NZ_NPLZ01000016.1 Protein Homology CDS 68526 68942 . + 0 ID=cds-WP_000270390.1;Parent=gene-CCO53_RS21690;Dbxref=GenBank:WP_000270390.1;Name=WP_000270390.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=CCO53_RS21690;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270390.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 68945 69301 . + . ID=gene-CCO53_RS21695;Name=CCO53_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21695;old_locus_tag=CCO53_21660 NZ_NPLZ01000016.1 Protein Homology CDS 68945 69301 . + 0 ID=cds-WP_000155665.1;Parent=gene-CCO53_RS21695;Dbxref=GenBank:WP_000155665.1;Name=WP_000155665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=CCO53_RS21695;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 69302 69640 . - . ID=gene-CCO53_RS21700;Name=CCO53_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21700;old_locus_tag=CCO53_21665 NZ_NPLZ01000016.1 Protein Homology CDS 69302 69640 . - 0 ID=cds-WP_000146597.1;Parent=gene-CCO53_RS21700;Dbxref=GenBank:WP_000146597.1;Name=WP_000146597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=CCO53_RS21700;product=hypothetical protein;protein_id=WP_000146597.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 69627 70082 . - . ID=gene-CCO53_RS21705;Name=CCO53_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21705;old_locus_tag=CCO53_21670 NZ_NPLZ01000016.1 Protein Homology CDS 69627 70082 . - 0 ID=cds-WP_094887829.1;Parent=gene-CCO53_RS21705;Dbxref=GenBank:WP_094887829.1;Name=WP_094887829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=CCO53_RS21705;product=hypothetical protein;protein_id=WP_094887829.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 70214 73039 . - . ID=gene-CCO53_RS21710;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CCO53_RS21710;old_locus_tag=CCO53_21675 NZ_NPLZ01000016.1 Protein Homology CDS 70214 73039 . - 0 ID=cds-WP_000357725.1;Parent=gene-CCO53_RS21710;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=CCO53_RS21710;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 73287 73817 . + . ID=gene-CCO53_RS21720;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=CCO53_RS21720;old_locus_tag=CCO53_21685 NZ_NPLZ01000016.1 Protein Homology CDS 73287 73817 . + 0 ID=cds-WP_000168322.1;Parent=gene-CCO53_RS21720;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=CCO53_RS21720;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 75093 75725 . + . ID=gene-CCO53_RS21725;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=CCO53_RS21725;old_locus_tag=CCO53_21690 NZ_NPLZ01000016.1 Protein Homology CDS 75093 75725 . + 0 ID=cds-WP_000389235.1;Parent=gene-CCO53_RS21725;Dbxref=GenBank:WP_000389235.1;Name=WP_000389235.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=CCO53_RS21725;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389235.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 75722 77110 . + . ID=gene-CCO53_RS21730;Name=CCO53_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21730;old_locus_tag=CCO53_21695 NZ_NPLZ01000016.1 Protein Homology CDS 75722 77110 . + 0 ID=cds-WP_058331893.1;Parent=gene-CCO53_RS21730;Dbxref=GenBank:WP_058331893.1;Name=WP_058331893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=CCO53_RS21730;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_058331893.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 77100 78419 . + . ID=gene-CCO53_RS21735;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=CCO53_RS21735;old_locus_tag=CCO53_21700 NZ_NPLZ01000016.1 Protein Homology CDS 77100 78419 . + 0 ID=cds-WP_094887830.1;Parent=gene-CCO53_RS21735;Dbxref=GenBank:WP_094887830.1;Name=WP_094887830.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=CCO53_RS21735;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_094887830.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq gene 78416 79693 . + . ID=gene-CCO53_RS21740;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=CCO53_RS21740;old_locus_tag=CCO53_21705 NZ_NPLZ01000016.1 Protein Homology CDS 78416 79693 . + 0 ID=cds-WP_076727784.1;Parent=gene-CCO53_RS21740;Dbxref=GenBank:WP_076727784.1;Name=WP_076727784.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=CCO53_RS21740;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_076727784.1;transl_table=11 NZ_NPLZ01000016.1 RefSeq pseudogene 79710 85947 . + . ID=gene-CCO53_RS21745;Name=siiE;end_range=85947,.;gbkey=Gene;gene=siiE;gene_biotype=pseudogene;locus_tag=CCO53_RS21745;old_locus_tag=CCO53_21710;partial=true;pseudo=true NZ_NPLZ01000016.1 Protein Homology CDS 79710 85947 . + 0 ID=cds-CCO53_RS21745;Parent=gene-CCO53_RS21745;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=85947,.;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO53_RS21745;partial=true;product=non-fimbrial adhesin SiiE;pseudo=true;transl_table=11 ##sequence-region NZ_NPLZ01000017.1 1 77157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000017.1 RefSeq region 1 77157 . + . ID=NZ_NPLZ01000017.1:1..77157;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000017.1 RefSeq gene 1 127 . - . ID=gene-CCO53_RS21750;Name=CCO53_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21750;old_locus_tag=CCO53_21715;partial=true;start_range=.,1 NZ_NPLZ01000017.1 Protein Homology CDS 1 127 . - 0 ID=cds-WP_116781764.1;Parent=gene-CCO53_RS21750;Dbxref=GenBank:WP_116781764.1;Name=WP_116781764.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO53_RS21750;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_116781764.1;start_range=.,1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 133 1533 . - . ID=gene-CCO53_RS21755;Name=CCO53_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21755;old_locus_tag=CCO53_21720 NZ_NPLZ01000017.1 Protein Homology CDS 133 1533 . - 0 ID=cds-WP_000724469.1;Parent=gene-CCO53_RS21755;Dbxref=GenBank:WP_000724469.1;Name=WP_000724469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=CCO53_RS21755;product=cytochrome-c peroxidase;protein_id=WP_000724469.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 1723 2355 . - . ID=gene-CCO53_RS21760;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=CCO53_RS21760;old_locus_tag=CCO53_21725 NZ_NPLZ01000017.1 Protein Homology CDS 1723 2355 . - 0 ID=cds-WP_000595420.1;Parent=gene-CCO53_RS21760;Dbxref=GenBank:WP_000595420.1;Name=WP_000595420.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=CCO53_RS21760;product=molecular chaperone TorD;protein_id=WP_000595420.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 2348 4900 . - . ID=gene-CCO53_RS21765;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=CCO53_RS21765;old_locus_tag=CCO53_21730 NZ_NPLZ01000017.1 Protein Homology CDS 2348 4900 . - 0 ID=cds-WP_000790672.1;Parent=gene-CCO53_RS21765;Dbxref=GenBank:WP_000790672.1;Name=WP_000790672.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=CCO53_RS21765;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_000790672.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 4890 6074 . - . ID=gene-CCO53_RS21770;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=CCO53_RS21770;old_locus_tag=CCO53_21735 NZ_NPLZ01000017.1 Protein Homology CDS 4890 6074 . - 0 ID=cds-WP_001230254.1;Parent=gene-CCO53_RS21770;Dbxref=GenBank:WP_001230254.1;Name=WP_001230254.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=CCO53_RS21770;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230254.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 6204 6896 . + . ID=gene-CCO53_RS21775;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=CCO53_RS21775;old_locus_tag=CCO53_21740 NZ_NPLZ01000017.1 Protein Homology CDS 6204 6896 . + 0 ID=cds-WP_001562512.1;Parent=gene-CCO53_RS21775;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=CCO53_RS21775;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 6869 7909 . - . ID=gene-CCO53_RS21780;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=CCO53_RS21780;old_locus_tag=CCO53_21745 NZ_NPLZ01000017.1 Protein Homology CDS 6869 7909 . - 0 ID=cds-WP_001202038.1;Parent=gene-CCO53_RS21780;Dbxref=GenBank:WP_001202038.1;Name=WP_001202038.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=CCO53_RS21780;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001202038.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 7989 10724 . + . ID=gene-CCO53_RS21785;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=CCO53_RS21785;old_locus_tag=CCO53_21750 NZ_NPLZ01000017.1 Protein Homology CDS 7989 10724 . + 0 ID=cds-WP_080160504.1;Parent=gene-CCO53_RS21785;Dbxref=GenBank:WP_080160504.1;Name=WP_080160504.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=CCO53_RS21785;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_080160504.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 10750 12087 . - . ID=gene-CCO53_RS21790;Name=CCO53_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21790;old_locus_tag=CCO53_21755 NZ_NPLZ01000017.1 Protein Homology CDS 10750 12087 . - 0 ID=cds-WP_000253524.1;Parent=gene-CCO53_RS21790;Dbxref=GenBank:WP_000253524.1;Name=WP_000253524.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=CCO53_RS21790;product=MFS transporter;protein_id=WP_000253524.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 12172 13320 . - . ID=gene-CCO53_RS21795;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=CCO53_RS21795;old_locus_tag=CCO53_21760 NZ_NPLZ01000017.1 Protein Homology CDS 12172 13320 . - 0 ID=cds-WP_000704735.1;Parent=gene-CCO53_RS21795;Dbxref=GenBank:WP_000704735.1;Name=WP_000704735.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=CCO53_RS21795;product=galactonate dehydratase;protein_id=WP_000704735.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 13317 13934 . - . ID=gene-CCO53_RS21800;Name=CCO53_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21800;old_locus_tag=CCO53_21765 NZ_NPLZ01000017.1 Protein Homology CDS 13317 13934 . - 0 ID=cds-WP_001198744.1;Parent=gene-CCO53_RS21800;Dbxref=GenBank:WP_001198744.1;Name=WP_001198744.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=CCO53_RS21800;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198744.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 13918 14796 . - . ID=gene-CCO53_RS21805;Name=CCO53_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21805;old_locus_tag=CCO53_21770 NZ_NPLZ01000017.1 Protein Homology CDS 13918 14796 . - 0 ID=cds-WP_000127129.1;Parent=gene-CCO53_RS21805;Dbxref=GenBank:WP_000127129.1;Name=WP_000127129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=CCO53_RS21805;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127129.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 14793 15482 . - . ID=gene-CCO53_RS21810;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=CCO53_RS21810;old_locus_tag=CCO53_21775 NZ_NPLZ01000017.1 Protein Homology CDS 14793 15482 . - 0 ID=cds-WP_000174317.1;Parent=gene-CCO53_RS21810;Dbxref=GenBank:WP_000174317.1;Name=WP_000174317.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=CCO53_RS21810;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174317.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 15743 16588 . - . ID=gene-CCO53_RS21815;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=CCO53_RS21815;old_locus_tag=CCO53_21780 NZ_NPLZ01000017.1 Protein Homology CDS 15743 16588 . - 0 ID=cds-WP_000985570.1;Parent=gene-CCO53_RS21815;Dbxref=GenBank:WP_000985570.1;Name=WP_000985570.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=CCO53_RS21815;product=sugar-phosphatase;protein_id=WP_000985570.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 16893 18155 . + . ID=gene-CCO53_RS21820;Name=CCO53_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21820;old_locus_tag=CCO53_21785 NZ_NPLZ01000017.1 Protein Homology CDS 16893 18155 . + 0 ID=cds-WP_000061257.1;Parent=gene-CCO53_RS21820;Dbxref=GenBank:WP_000061257.1;Name=WP_000061257.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=CCO53_RS21820;product=MFS transporter;protein_id=WP_000061257.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 18169 19362 . + . ID=gene-CCO53_RS21825;Name=CCO53_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21825;old_locus_tag=CCO53_21790 NZ_NPLZ01000017.1 Protein Homology CDS 18169 19362 . + 0 ID=cds-WP_024147486.1;Parent=gene-CCO53_RS21825;Dbxref=GenBank:WP_024147486.1;Name=WP_024147486.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=CCO53_RS21825;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_024147486.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 19477 20373 . + . ID=gene-CCO53_RS21830;Name=CCO53_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21830;old_locus_tag=CCO53_21795 NZ_NPLZ01000017.1 Protein Homology CDS 19477 20373 . + 0 ID=cds-WP_001054591.1;Parent=gene-CCO53_RS21830;Dbxref=GenBank:WP_001054591.1;Name=WP_001054591.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=CCO53_RS21830;product=LysR family transcriptional regulator;protein_id=WP_001054591.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 20392 22806 . - . ID=gene-CCO53_RS21835;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CCO53_RS21835;old_locus_tag=CCO53_21800 NZ_NPLZ01000017.1 Protein Homology CDS 20392 22806 . - 0 ID=cds-WP_000072047.1;Parent=gene-CCO53_RS21835;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=CCO53_RS21835;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 22835 23908 . - . ID=gene-CCO53_RS21840;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CCO53_RS21840;old_locus_tag=CCO53_21805 NZ_NPLZ01000017.1 Protein Homology CDS 22835 23908 . - 0 ID=cds-WP_000059373.1;Parent=gene-CCO53_RS21840;Dbxref=GenBank:WP_000059373.1;Name=WP_000059373.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=CCO53_RS21840;product=DNA replication/repair protein RecF;protein_id=WP_000059373.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 24106 25206 . - . ID=gene-CCO53_RS21845;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CCO53_RS21845;old_locus_tag=CCO53_21810 NZ_NPLZ01000017.1 Protein Homology CDS 24106 25206 . - 0 ID=cds-WP_000673474.1;Parent=gene-CCO53_RS21845;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=CCO53_RS21845;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 25211 26611 . - . ID=gene-CCO53_RS21850;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CCO53_RS21850;old_locus_tag=CCO53_21815 NZ_NPLZ01000017.1 Protein Homology CDS 25211 26611 . - 0 ID=cds-WP_000059093.1;Parent=gene-CCO53_RS21850;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=CCO53_RS21850;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 26951 27043 . + . ID=gene-CCO53_RS24455;Name=CCO53_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24455 NZ_NPLZ01000017.1 Protein Homology CDS 26951 27043 . + 0 ID=cds-WP_418142141.1;Parent=gene-CCO53_RS24455;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=CCO53_RS24455;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 27272 27412 . + . ID=gene-CCO53_RS21855;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CCO53_RS21855;old_locus_tag=CCO53_21820 NZ_NPLZ01000017.1 Protein Homology CDS 27272 27412 . + 0 ID=cds-WP_000831330.1;Parent=gene-CCO53_RS21855;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=CCO53_RS21855;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 27429 27788 . + . ID=gene-CCO53_RS21860;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CCO53_RS21860;old_locus_tag=CCO53_21825 NZ_NPLZ01000017.1 Protein Homology CDS 27429 27788 . + 0 ID=cds-WP_000239725.1;Parent=gene-CCO53_RS21860;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=CCO53_RS21860;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 27752 28009 . + . ID=gene-CCO53_RS21865;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CCO53_RS21865;old_locus_tag=CCO53_21830 NZ_NPLZ01000017.1 Protein Homology CDS 27752 28009 . + 0 ID=cds-WP_001307474.1;Parent=gene-CCO53_RS21865;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=CCO53_RS21865;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 28012 29658 . + . ID=gene-CCO53_RS21870;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CCO53_RS21870;old_locus_tag=CCO53_21835 NZ_NPLZ01000017.1 Protein Homology CDS 28012 29658 . + 0 ID=cds-WP_094887831.1;Parent=gene-CCO53_RS21870;Dbxref=GenBank:WP_094887831.1;Name=WP_094887831.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=CCO53_RS21870;product=membrane protein insertase YidC;protein_id=WP_094887831.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 29959 31032 . - . ID=gene-CCO53_RS21875;Name=CCO53_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21875;old_locus_tag=CCO53_21840 NZ_NPLZ01000017.1 Protein Homology CDS 29959 31032 . - 0 ID=cds-WP_094887832.1;Parent=gene-CCO53_RS21875;Dbxref=GenBank:WP_094887832.1;Name=WP_094887832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018475.6;locus_tag=CCO53_RS21875;product=hypothetical protein;protein_id=WP_094887832.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 31207 32571 . + . ID=gene-CCO53_RS21880;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CCO53_RS21880;old_locus_tag=CCO53_21845 NZ_NPLZ01000017.1 Protein Homology CDS 31207 32571 . + 0 ID=cds-WP_080160507.1;Parent=gene-CCO53_RS21880;Dbxref=GenBank:WP_080160507.1;Name=WP_080160507.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=CCO53_RS21880;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_080160507.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq pseudogene 32754 33143 . + . ID=gene-CCO53_RS21885;Name=CCO53_RS21885;end_range=33143,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS21885;old_locus_tag=CCO53_21850;partial=true;pseudo=true NZ_NPLZ01000017.1 Protein Homology CDS 32754 33143 . + 0 ID=cds-CCO53_RS21885;Parent=gene-CCO53_RS21885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=33143,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=CCO53_RS21885;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_NPLZ01000017.1 RefSeq pseudogene 33157 33450 . + . ID=gene-CCO53_RS21890;Name=CCO53_RS21890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS21890;old_locus_tag=CCO53_21855;partial=true;pseudo=true;start_range=.,33157 NZ_NPLZ01000017.1 Protein Homology CDS 33157 33450 . + 0 ID=cds-CCO53_RS21890;Parent=gene-CCO53_RS21890;Note=Involved in anaerobic NO protection%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=CCO53_RS21890;partial=true;product=HTH-type transcriptional regulator YidZ;pseudo=true;start_range=.,33157;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 33608 34363 . + . ID=gene-CCO53_RS21895;Name=CCO53_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21895;old_locus_tag=CCO53_21860 NZ_NPLZ01000017.1 Protein Homology CDS 33608 34363 . + 0 ID=cds-WP_000190678.1;Parent=gene-CCO53_RS21895;Dbxref=GenBank:WP_000190678.1;Name=WP_000190678.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=CCO53_RS21895;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190678.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 34363 34947 . + . ID=gene-CCO53_RS21900;Name=CCO53_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21900;old_locus_tag=CCO53_21865 NZ_NPLZ01000017.1 Protein Homology CDS 34363 34947 . + 0 ID=cds-WP_001575173.1;Parent=gene-CCO53_RS21900;Dbxref=GenBank:WP_001575173.1;Name=WP_001575173.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=CCO53_RS21900;product=NADPH-dependent FMN reductase;protein_id=WP_001575173.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 34992 36329 . - . ID=gene-CCO53_RS21905;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=CCO53_RS21905;old_locus_tag=CCO53_21870 NZ_NPLZ01000017.1 Protein Homology CDS 34992 36329 . - 0 ID=cds-WP_058331868.1;Parent=gene-CCO53_RS21905;Dbxref=GenBank:WP_058331868.1;Name=WP_058331868.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=CCO53_RS21905;product=adenine permease AdeP;protein_id=WP_058331868.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 36498 37163 . + . ID=gene-CCO53_RS21910;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=CCO53_RS21910;old_locus_tag=CCO53_21875 NZ_NPLZ01000017.1 Protein Homology CDS 36498 37163 . + 0 ID=cds-WP_023198755.1;Parent=gene-CCO53_RS21910;Dbxref=GenBank:WP_023198755.1;Name=WP_023198755.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=CCO53_RS21910;product=6-phosphogluconate phosphatase;protein_id=WP_023198755.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 37258 37983 . - . ID=gene-CCO53_RS21915;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CCO53_RS21915;old_locus_tag=CCO53_21880 NZ_NPLZ01000017.1 Protein Homology CDS 37258 37983 . - 0 ID=cds-WP_000377800.1;Parent=gene-CCO53_RS21915;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=CCO53_RS21915;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 37998 38771 . - . ID=gene-CCO53_RS21920;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CCO53_RS21920;old_locus_tag=CCO53_21885 NZ_NPLZ01000017.1 Protein Homology CDS 37998 38771 . - 0 ID=cds-WP_000063118.1;Parent=gene-CCO53_RS21920;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=CCO53_RS21920;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 38858 39748 . - . ID=gene-CCO53_RS21925;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CCO53_RS21925;old_locus_tag=CCO53_21890 NZ_NPLZ01000017.1 Protein Homology CDS 38858 39748 . - 0 ID=cds-WP_000212197.1;Parent=gene-CCO53_RS21925;Dbxref=GenBank:WP_000212197.1;Name=WP_000212197.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=CCO53_RS21925;product=phosphate ABC transporter permease PstA;protein_id=WP_000212197.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 39748 40707 . - . ID=gene-CCO53_RS21930;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CCO53_RS21930;old_locus_tag=CCO53_21895 NZ_NPLZ01000017.1 Protein Homology CDS 39748 40707 . - 0 ID=cds-WP_000741630.1;Parent=gene-CCO53_RS21930;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=CCO53_RS21930;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 40843 41883 . - . ID=gene-CCO53_RS21935;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=CCO53_RS21935;old_locus_tag=CCO53_21900 NZ_NPLZ01000017.1 Protein Homology CDS 40843 41883 . - 0 ID=cds-WP_000867127.1;Parent=gene-CCO53_RS21935;Dbxref=GenBank:WP_000867127.1;Name=WP_000867127.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=CCO53_RS21935;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867127.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 42049 43422 . - . ID=gene-CCO53_RS21940;Name=CCO53_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21940;old_locus_tag=CCO53_21905 NZ_NPLZ01000017.1 Protein Homology CDS 42049 43422 . - 0 ID=cds-WP_094887833.1;Parent=gene-CCO53_RS21940;Dbxref=GenBank:WP_094887833.1;Name=WP_094887833.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=CCO53_RS21940;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_094887833.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 43471 44289 . - . ID=gene-CCO53_RS21945;Name=CCO53_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21945;old_locus_tag=CCO53_21910 NZ_NPLZ01000017.1 Protein Homology CDS 43471 44289 . - 0 ID=cds-WP_023255014.1;Parent=gene-CCO53_RS21945;Dbxref=GenBank:WP_023255014.1;Name=WP_023255014.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=CCO53_RS21945;product=shikimate 5-dehydrogenase;protein_id=WP_023255014.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 44384 46141 . + . ID=gene-CCO53_RS21950;Name=CCO53_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21950;old_locus_tag=CCO53_21915 NZ_NPLZ01000017.1 Protein Homology CDS 44384 46141 . + 0 ID=cds-WP_094887834.1;Parent=gene-CCO53_RS21950;Dbxref=GenBank:WP_094887834.1;Name=WP_094887834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=CCO53_RS21950;product=SgrR family transcriptional regulator;protein_id=WP_094887834.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 46291 48120 . - . ID=gene-CCO53_RS21955;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CCO53_RS21955;old_locus_tag=CCO53_21920 NZ_NPLZ01000017.1 Protein Homology CDS 46291 48120 . - 0 ID=cds-WP_058331865.1;Parent=gene-CCO53_RS21955;Dbxref=GenBank:WP_058331865.1;Name=WP_058331865.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=CCO53_RS21955;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_058331865.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 48309 49679 . - . ID=gene-CCO53_RS21960;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CCO53_RS21960;old_locus_tag=CCO53_21925 NZ_NPLZ01000017.1 Protein Homology CDS 48309 49679 . - 0 ID=cds-WP_000934851.1;Parent=gene-CCO53_RS21960;Dbxref=GenBank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=CCO53_RS21960;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 49999 50697 . - . ID=gene-CCO53_RS21970;Name=CCO53_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21970;old_locus_tag=CCO53_21935 NZ_NPLZ01000017.1 Protein Homology CDS 49999 50697 . - 0 ID=cds-WP_058331864.1;Parent=gene-CCO53_RS21970;Dbxref=GenBank:WP_058331864.1;Name=WP_058331864.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=CCO53_RS21970;product=Bax inhibitor-1/YccA family protein;protein_id=WP_058331864.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 50927 51346 . - . ID=gene-CCO53_RS21975;Name=CCO53_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS21975;old_locus_tag=CCO53_21940 NZ_NPLZ01000017.1 Protein Homology CDS 50927 51346 . - 0 ID=cds-WP_001251971.1;Parent=gene-CCO53_RS21975;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=CCO53_RS21975;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 51367 52749 . - . ID=gene-CCO53_RS21980;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CCO53_RS21980;old_locus_tag=CCO53_21945 NZ_NPLZ01000017.1 Protein Homology CDS 51367 52749 . - 0 ID=cds-WP_000190499.1;Parent=gene-CCO53_RS21980;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=CCO53_RS21980;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 52776 53639 . - . ID=gene-CCO53_RS21985;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CCO53_RS21985;old_locus_tag=CCO53_21950 NZ_NPLZ01000017.1 Protein Homology CDS 52776 53639 . - 0 ID=cds-WP_000896506.1;Parent=gene-CCO53_RS21985;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=CCO53_RS21985;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 53690 55231 . - . ID=gene-CCO53_RS21990;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CCO53_RS21990;old_locus_tag=CCO53_21955 NZ_NPLZ01000017.1 Protein Homology CDS 53690 55231 . - 0 ID=cds-WP_001176751.1;Parent=gene-CCO53_RS21990;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=CCO53_RS21990;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 55244 55777 . - . ID=gene-CCO53_RS21995;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=CCO53_RS21995;old_locus_tag=CCO53_21960 NZ_NPLZ01000017.1 Protein Homology CDS 55244 55777 . - 0 ID=cds-WP_001288957.1;Parent=gene-CCO53_RS21995;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=CCO53_RS21995;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 55792 56262 . - . ID=gene-CCO53_RS22000;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=CCO53_RS22000;old_locus_tag=CCO53_21965 NZ_NPLZ01000017.1 Protein Homology CDS 55792 56262 . - 0 ID=cds-WP_001052212.1;Parent=gene-CCO53_RS22000;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=CCO53_RS22000;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 56322 56561 . - . ID=gene-CCO53_RS22005;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CCO53_RS22005;old_locus_tag=CCO53_21970 NZ_NPLZ01000017.1 Protein Homology CDS 56322 56561 . - 0 ID=cds-WP_000429386.1;Parent=gene-CCO53_RS22005;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=CCO53_RS22005;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 56608 57423 . - . ID=gene-CCO53_RS22010;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CCO53_RS22010;old_locus_tag=CCO53_21975 NZ_NPLZ01000017.1 Protein Homology CDS 56608 57423 . - 0 ID=cds-WP_000135632.1;Parent=gene-CCO53_RS22010;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=CCO53_RS22010;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 57432 57812 . - . ID=gene-CCO53_RS22015;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=CCO53_RS22015;old_locus_tag=CCO53_21980 NZ_NPLZ01000017.1 Protein Homology CDS 57432 57812 . - 0 ID=cds-WP_000116685.1;Parent=gene-CCO53_RS22015;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=CCO53_RS22015;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 58428 59051 . - . ID=gene-CCO53_RS22020;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CCO53_RS22020;old_locus_tag=CCO53_21985 NZ_NPLZ01000017.1 Protein Homology CDS 58428 59051 . - 0 ID=cds-WP_001519938.1;Parent=gene-CCO53_RS22020;Dbxref=GenBank:WP_001519938.1;Name=WP_001519938.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=CCO53_RS22020;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 59154 61043 . - . ID=gene-CCO53_RS22025;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CCO53_RS22025;old_locus_tag=CCO53_21990 NZ_NPLZ01000017.1 Protein Homology CDS 59154 61043 . - 0 ID=cds-WP_000499872.1;Parent=gene-CCO53_RS22025;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=CCO53_RS22025;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 61422 61865 . - . ID=gene-CCO53_RS22030;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=CCO53_RS22030;old_locus_tag=CCO53_21995 NZ_NPLZ01000017.1 Protein Homology CDS 61422 61865 . - 0 ID=cds-WP_000763720.1;Parent=gene-CCO53_RS22030;Dbxref=GenBank:WP_000763720.1;Name=WP_000763720.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=CCO53_RS22030;product=FMN-binding protein MioC;protein_id=WP_000763720.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 61955 62413 . - . ID=gene-CCO53_RS22035;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=CCO53_RS22035;old_locus_tag=CCO53_22000 NZ_NPLZ01000017.1 Protein Homology CDS 61955 62413 . - 0 ID=cds-WP_000433016.1;Parent=gene-CCO53_RS22035;Dbxref=GenBank:WP_000433016.1;Name=WP_000433016.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=CCO53_RS22035;product=transcriptional regulator AsnC;protein_id=WP_000433016.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 62564 63556 . + . ID=gene-CCO53_RS22040;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=CCO53_RS22040;old_locus_tag=CCO53_22005 NZ_NPLZ01000017.1 Protein Homology CDS 62564 63556 . + 0 ID=cds-WP_000845123.1;Parent=gene-CCO53_RS22040;Dbxref=GenBank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=CCO53_RS22040;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 63561 65012 . - . ID=gene-CCO53_RS22045;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=CCO53_RS22045;old_locus_tag=CCO53_22010 NZ_NPLZ01000017.1 Protein Homology CDS 63561 65012 . - 0 ID=cds-WP_076727592.1;Parent=gene-CCO53_RS22045;Dbxref=GenBank:WP_076727592.1;Name=WP_076727592.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=CCO53_RS22045;product=ATPase RavA stimulator ViaA;protein_id=WP_076727592.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 65006 66502 . - . ID=gene-CCO53_RS22050;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=CCO53_RS22050;old_locus_tag=CCO53_22015 NZ_NPLZ01000017.1 Protein Homology CDS 65006 66502 . - 0 ID=cds-WP_000940975.1;Parent=gene-CCO53_RS22050;Dbxref=GenBank:WP_000940975.1;Name=WP_000940975.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=CCO53_RS22050;product=ATPase RavA;protein_id=WP_000940975.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 66850 68718 . + . ID=gene-CCO53_RS22055;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=CCO53_RS22055;old_locus_tag=CCO53_22020 NZ_NPLZ01000017.1 Protein Homology CDS 66850 68718 . + 0 ID=cds-WP_000102338.1;Parent=gene-CCO53_RS22055;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=CCO53_RS22055;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 68915 69334 . + . ID=gene-CCO53_RS22060;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CCO53_RS22060;old_locus_tag=CCO53_22025 NZ_NPLZ01000017.1 Protein Homology CDS 68915 69334 . + 0 ID=cds-WP_000715944.1;Parent=gene-CCO53_RS22060;Dbxref=GenBank:WP_000715944.1;Name=WP_000715944.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=CCO53_RS22060;product=D-ribose pyranase;protein_id=WP_000715944.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 69342 70847 . + . ID=gene-CCO53_RS22065;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=CCO53_RS22065;old_locus_tag=CCO53_22030 NZ_NPLZ01000017.1 Protein Homology CDS 69342 70847 . + 0 ID=cds-WP_000339359.1;Parent=gene-CCO53_RS22065;Dbxref=GenBank:WP_000339359.1;Name=WP_000339359.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=CCO53_RS22065;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339359.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 70853 71818 . + . ID=gene-CCO53_RS22070;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=CCO53_RS22070;old_locus_tag=CCO53_22035 NZ_NPLZ01000017.1 Protein Homology CDS 70853 71818 . + 0 ID=cds-WP_000211345.1;Parent=gene-CCO53_RS22070;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=CCO53_RS22070;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 71843 72733 . + . ID=gene-CCO53_RS22075;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=CCO53_RS22075;old_locus_tag=CCO53_22040 NZ_NPLZ01000017.1 Protein Homology CDS 71843 72733 . + 0 ID=cds-WP_001056260.1;Parent=gene-CCO53_RS22075;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=CCO53_RS22075;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 72866 73795 . + . ID=gene-CCO53_RS22080;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO53_RS22080;old_locus_tag=CCO53_22045 NZ_NPLZ01000017.1 Protein Homology CDS 72866 73795 . + 0 ID=cds-WP_000844728.1;Parent=gene-CCO53_RS22080;Dbxref=GenBank:WP_000844728.1;Name=WP_000844728.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=CCO53_RS22080;product=ribokinase;protein_id=WP_000844728.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 73799 74797 . + . ID=gene-CCO53_RS22085;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=CCO53_RS22085;old_locus_tag=CCO53_22050 NZ_NPLZ01000017.1 Protein Homology CDS 73799 74797 . + 0 ID=cds-WP_000224487.1;Parent=gene-CCO53_RS22085;Dbxref=GenBank:WP_000224487.1;Name=WP_000224487.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=CCO53_RS22085;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224487.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 74763 76190 . - . ID=gene-CCO53_RS22090;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=CCO53_RS22090;old_locus_tag=CCO53_22055 NZ_NPLZ01000017.1 Protein Homology CDS 74763 76190 . - 0 ID=cds-WP_000202071.1;Parent=gene-CCO53_RS22090;Dbxref=GenBank:WP_000202071.1;Name=WP_000202071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=CCO53_RS22090;product=multidrug transporter subunit MdtD;protein_id=WP_000202071.1;transl_table=11 NZ_NPLZ01000017.1 RefSeq gene 76202 76906 . - . ID=gene-CCO53_RS22095;Name=CCO53_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22095;old_locus_tag=CCO53_22060 NZ_NPLZ01000017.1 Protein Homology CDS 76202 76906 . - 0 ID=cds-WP_001131148.1;Parent=gene-CCO53_RS22095;Dbxref=GenBank:WP_001131148.1;Name=WP_001131148.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=CCO53_RS22095;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131148.1;transl_table=11 ##sequence-region NZ_NPLZ01000018.1 1 51266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000018.1 RefSeq region 1 51266 . + . ID=NZ_NPLZ01000018.1:1..51266;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000018.1 RefSeq gene 1 342 . + . ID=gene-CCO53_RS22100;Name=CCO53_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22100;old_locus_tag=CCO53_22065;partial=true;start_range=.,1 NZ_NPLZ01000018.1 Protein Homology CDS 1 342 . + 0 ID=cds-WP_176456362.1;Parent=gene-CCO53_RS22100;Dbxref=GenBank:WP_176456362.1;Name=WP_176456362.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=CCO53_RS22100;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_176456362.1;start_range=.,1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 336 1571 . + . ID=gene-CCO53_RS22105;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=CCO53_RS22105;old_locus_tag=CCO53_22070 NZ_NPLZ01000018.1 Protein Homology CDS 336 1571 . + 0 ID=cds-WP_000956095.1;Parent=gene-CCO53_RS22105;Dbxref=GenBank:WP_000956095.1;Name=WP_000956095.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=CCO53_RS22105;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956095.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 1646 2656 . - . ID=gene-CCO53_RS22110;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=CCO53_RS22110;old_locus_tag=CCO53_22075 NZ_NPLZ01000018.1 Protein Homology CDS 1646 2656 . - 0 ID=cds-WP_001275101.1;Parent=gene-CCO53_RS22110;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=CCO53_RS22110;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 2672 4192 . - . ID=gene-CCO53_RS22115;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=CCO53_RS22115;old_locus_tag=CCO53_22080 NZ_NPLZ01000018.1 Protein Homology CDS 2672 4192 . - 0 ID=cds-WP_000535913.1;Parent=gene-CCO53_RS22115;Dbxref=GenBank:WP_000535913.1;Name=WP_000535913.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=CCO53_RS22115;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000535913.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 4326 5324 . - . ID=gene-CCO53_RS22120;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=CCO53_RS22120;old_locus_tag=CCO53_22085 NZ_NPLZ01000018.1 Protein Homology CDS 4326 5324 . - 0 ID=cds-WP_001036938.1;Parent=gene-CCO53_RS22120;Dbxref=GenBank:WP_001036938.1;Name=WP_001036938.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=CCO53_RS22120;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036938.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 5823 6845 . - . ID=gene-CCO53_RS22125;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=CCO53_RS22125;old_locus_tag=CCO53_22090 NZ_NPLZ01000018.1 Protein Homology CDS 5823 6845 . - 0 ID=cds-WP_000628634.1;Parent=gene-CCO53_RS22125;Dbxref=GenBank:WP_000628634.1;Name=WP_000628634.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=CCO53_RS22125;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628634.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 6995 8137 . - . ID=gene-CCO53_RS22130;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=CCO53_RS22130;old_locus_tag=CCO53_22095 NZ_NPLZ01000018.1 Protein Homology CDS 6995 8137 . - 0 ID=cds-WP_094887836.1;Parent=gene-CCO53_RS22130;Dbxref=GenBank:WP_094887836.1;Name=WP_094887836.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=CCO53_RS22130;product=DUF418 domain-containing protein YeiB;protein_id=WP_094887836.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 8152 8820 . - . ID=gene-CCO53_RS22135;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CCO53_RS22135;old_locus_tag=CCO53_22100 NZ_NPLZ01000018.1 Protein Homology CDS 8152 8820 . - 0 ID=cds-WP_001139611.1;Parent=gene-CCO53_RS22135;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=CCO53_RS22135;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 9150 10007 . + . ID=gene-CCO53_RS22145;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=CCO53_RS22145;old_locus_tag=CCO53_22110 NZ_NPLZ01000018.1 Protein Homology CDS 9150 10007 . + 0 ID=cds-WP_000425488.1;Parent=gene-CCO53_RS22145;Dbxref=GenBank:WP_000425488.1;Name=WP_000425488.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=CCO53_RS22145;product=S-formylglutathione hydrolase;protein_id=WP_000425488.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 9996 10385 . - . ID=gene-CCO53_RS22150;Name=CCO53_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22150;old_locus_tag=CCO53_22115 NZ_NPLZ01000018.1 Protein Homology CDS 9996 10385 . - 0 ID=cds-WP_000876817.1;Parent=gene-CCO53_RS22150;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=CCO53_RS22150;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 10390 11757 . - . ID=gene-CCO53_RS22155;Name=CCO53_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22155;old_locus_tag=CCO53_22120 NZ_NPLZ01000018.1 Protein Homology CDS 10390 11757 . - 0 ID=cds-WP_000443206.1;Parent=gene-CCO53_RS22155;Dbxref=GenBank:WP_000443206.1;Name=WP_000443206.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=CCO53_RS22155;product=L-serine ammonia-lyase;protein_id=WP_000443206.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 11974 12861 . + . ID=gene-CCO53_RS22160;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO53_RS22160;old_locus_tag=CCO53_22125 NZ_NPLZ01000018.1 Protein Homology CDS 11974 12861 . + 0 ID=cds-WP_076726885.1;Parent=gene-CCO53_RS22160;Dbxref=GenBank:WP_076726885.1;Name=WP_076726885.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=CCO53_RS22160;product=phosphoserine phosphatase SerB;protein_id=WP_076726885.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 12894 14216 . + . ID=gene-CCO53_RS22165;Name=CCO53_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22165;old_locus_tag=CCO53_22130 NZ_NPLZ01000018.1 Protein Homology CDS 12894 14216 . + 0 ID=cds-WP_000023807.1;Parent=gene-CCO53_RS22165;Dbxref=GenBank:WP_000023807.1;Name=WP_000023807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=CCO53_RS22165;product=MFS transporter;protein_id=WP_000023807.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 14260 16251 . - . ID=gene-CCO53_RS22170;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=CCO53_RS22170;old_locus_tag=CCO53_22135 NZ_NPLZ01000018.1 Protein Homology CDS 14260 16251 . - 0 ID=cds-WP_000488251.1;Parent=gene-CCO53_RS22170;Dbxref=GenBank:WP_000488251.1;Name=WP_000488251.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=CCO53_RS22170;product=catecholate siderophore receptor CirA;protein_id=WP_000488251.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 16598 18067 . - . ID=gene-CCO53_RS22180;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=CCO53_RS22180;old_locus_tag=CCO53_22145 NZ_NPLZ01000018.1 Protein Homology CDS 16598 18067 . - 0 ID=cds-WP_000534999.1;Parent=gene-CCO53_RS22180;Dbxref=GenBank:WP_000534999.1;Name=WP_000534999.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=CCO53_RS22180;product=lysine-specific permease;protein_id=WP_000534999.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 18257 19120 . - . ID=gene-CCO53_RS22185;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=CCO53_RS22185;old_locus_tag=CCO53_22150 NZ_NPLZ01000018.1 Protein Homology CDS 18257 19120 . - 0 ID=cds-WP_000548316.1;Parent=gene-CCO53_RS22185;Dbxref=GenBank:WP_000548316.1;Name=WP_000548316.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=CCO53_RS22185;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548316.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 19241 20290 . + . ID=gene-CCO53_RS22190;Name=CCO53_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22190;old_locus_tag=CCO53_22155 NZ_NPLZ01000018.1 Protein Homology CDS 19241 20290 . + 0 ID=cds-WP_000137966.1;Parent=gene-CCO53_RS22190;Dbxref=GenBank:WP_000137966.1;Name=WP_000137966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=CCO53_RS22190;product=YeiH family protein;protein_id=WP_000137966.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 20369 21226 . + . ID=gene-CCO53_RS22195;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=CCO53_RS22195;old_locus_tag=CCO53_22160 NZ_NPLZ01000018.1 Protein Homology CDS 20369 21226 . + 0 ID=cds-WP_000873913.1;Parent=gene-CCO53_RS22195;Dbxref=GenBank:WP_000873913.1;Name=WP_000873913.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=CCO53_RS22195;product=deoxyribonuclease IV;protein_id=WP_000873913.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 21291 22979 . - . ID=gene-CCO53_RS22200;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=CCO53_RS22200;old_locus_tag=CCO53_22165 NZ_NPLZ01000018.1 Protein Homology CDS 21291 22979 . - 0 ID=cds-WP_058331879.1;Parent=gene-CCO53_RS22200;Dbxref=GenBank:WP_058331879.1;Name=WP_058331879.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=CCO53_RS22200;product=PTS fructose transporter subunit IIBC;protein_id=WP_058331879.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 22996 23934 . - . ID=gene-CCO53_RS22205;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=CCO53_RS22205;old_locus_tag=CCO53_22170 NZ_NPLZ01000018.1 Protein Homology CDS 22996 23934 . - 0 ID=cds-WP_000091249.1;Parent=gene-CCO53_RS22205;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=CCO53_RS22205;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 23934 25064 . - . ID=gene-CCO53_RS22210;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=CCO53_RS22210;old_locus_tag=CCO53_22175 NZ_NPLZ01000018.1 Protein Homology CDS 23934 25064 . - 0 ID=cds-WP_000487287.1;Parent=gene-CCO53_RS22210;Dbxref=GenBank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=CCO53_RS22210;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 25433 26614 . + . ID=gene-CCO53_RS22215;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=CCO53_RS22215;old_locus_tag=CCO53_22180 NZ_NPLZ01000018.1 Protein Homology CDS 25433 26614 . + 0 ID=cds-WP_000551933.1;Parent=gene-CCO53_RS22215;Dbxref=GenBank:WP_000551933.1;Name=WP_000551933.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=CCO53_RS22215;product=sugar efflux transporter SetB;protein_id=WP_000551933.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 26679 27344 . - . ID=gene-CCO53_RS22220;Name=CCO53_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22220;old_locus_tag=CCO53_22185 NZ_NPLZ01000018.1 Protein Homology CDS 26679 27344 . - 0 ID=cds-WP_001213879.1;Parent=gene-CCO53_RS22220;Dbxref=GenBank:WP_001213879.1;Name=WP_001213879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=CCO53_RS22220;product=GNVR domain-containing protein;protein_id=WP_001213879.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 27346 27468 . - . ID=gene-CCO53_RS22225;Name=CCO53_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22225;old_locus_tag=CCO53_22190 NZ_NPLZ01000018.1 Protein Homology CDS 27346 27468 . - 0 ID=cds-WP_001533779.1;Parent=gene-CCO53_RS22225;Dbxref=GenBank:WP_001533779.1;Name=WP_001533779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=CCO53_RS22225;product=hypothetical protein;protein_id=WP_001533779.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 27856 28110 . - . ID=gene-CCO53_RS22230;Name=CCO53_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22230;old_locus_tag=CCO53_22195 NZ_NPLZ01000018.1 Protein Homology CDS 27856 28110 . - 0 ID=cds-WP_001523448.1;Parent=gene-CCO53_RS22230;Dbxref=GenBank:WP_001523448.1;Name=WP_001523448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=CCO53_RS22230;product=YkgJ family cysteine cluster protein;protein_id=WP_001523448.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 28434 29006 . + . ID=gene-CCO53_RS22235;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=CCO53_RS22235;old_locus_tag=CCO53_22200 NZ_NPLZ01000018.1 Protein Homology CDS 28434 29006 . + 0 ID=cds-WP_001136822.1;Parent=gene-CCO53_RS22235;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=CCO53_RS22235;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 29218 30204 . + . ID=gene-CCO53_RS22240;Name=CCO53_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22240;old_locus_tag=CCO53_22205 NZ_NPLZ01000018.1 Protein Homology CDS 29218 30204 . + 0 ID=cds-WP_000169350.1;Parent=gene-CCO53_RS22240;Dbxref=GenBank:WP_000169350.1;Name=WP_000169350.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=CCO53_RS22240;product=CobW family GTP-binding protein;protein_id=WP_000169350.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 30234 30953 . + . ID=gene-CCO53_RS22245;Name=CCO53_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22245;old_locus_tag=CCO53_22210 NZ_NPLZ01000018.1 Protein Homology CDS 30234 30953 . + 0 ID=cds-WP_000178095.1;Parent=gene-CCO53_RS22245;Dbxref=GenBank:WP_000178095.1;Name=WP_000178095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=CCO53_RS22245;product=phosphatase PAP2 family protein;protein_id=WP_000178095.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 31367 31939 . + . ID=gene-CCO53_RS22255;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=CCO53_RS22255;old_locus_tag=CCO53_22220 NZ_NPLZ01000018.1 Protein Homology CDS 31367 31939 . + 0 ID=cds-WP_000241015.1;Parent=gene-CCO53_RS22255;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=CCO53_RS22255;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 32265 33821 . + . ID=gene-CCO53_RS22265;Name=CCO53_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22265;old_locus_tag=CCO53_22225 NZ_NPLZ01000018.1 Protein Homology CDS 32265 33821 . + 0 ID=cds-WP_000957751.1;Parent=gene-CCO53_RS22265;Dbxref=GenBank:WP_000957751.1;Name=WP_000957751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=CCO53_RS22265;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000957751.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 33928 35733 . + . ID=gene-CCO53_RS22270;Name=CCO53_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22270;old_locus_tag=CCO53_22230 NZ_NPLZ01000018.1 Protein Homology CDS 33928 35733 . + 0 ID=cds-WP_000561742.1;Parent=gene-CCO53_RS22270;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=CCO53_RS22270;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 35743 36837 . + . ID=gene-CCO53_RS22275;Name=CCO53_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22275;old_locus_tag=CCO53_22235 NZ_NPLZ01000018.1 Protein Homology CDS 35743 36837 . + 0 ID=cds-WP_000501623.1;Parent=gene-CCO53_RS22275;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=CCO53_RS22275;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 36837 37862 . + . ID=gene-CCO53_RS22280;Name=CCO53_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22280;old_locus_tag=CCO53_22240 NZ_NPLZ01000018.1 Protein Homology CDS 36837 37862 . + 0 ID=cds-WP_001137761.1;Parent=gene-CCO53_RS22280;Dbxref=GenBank:WP_001137761.1;Name=WP_001137761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=CCO53_RS22280;product=ABC transporter permease;protein_id=WP_001137761.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 37864 39453 . + . ID=gene-CCO53_RS22285;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=CCO53_RS22285;old_locus_tag=CCO53_22245 NZ_NPLZ01000018.1 Protein Homology CDS 37864 39453 . + 0 ID=cds-WP_000203620.1;Parent=gene-CCO53_RS22285;Dbxref=GenBank:WP_000203620.1;Name=WP_000203620.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=CCO53_RS22285;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000203620.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 39457 39801 . - . ID=gene-CCO53_RS22290;Name=CCO53_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22290;old_locus_tag=CCO53_22250 NZ_NPLZ01000018.1 Protein Homology CDS 39457 39801 . - 0 ID=cds-WP_001094639.1;Parent=gene-CCO53_RS22290;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=CCO53_RS22290;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 40192 41382 . - . ID=gene-CCO53_RS22300;Name=CCO53_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22300;old_locus_tag=CCO53_22260 NZ_NPLZ01000018.1 Protein Homology CDS 40192 41382 . - 0 ID=cds-WP_000213349.1;Parent=gene-CCO53_RS22300;Dbxref=GenBank:WP_000213349.1;Name=WP_000213349.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=CCO53_RS22300;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213349.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 41410 42105 . - . ID=gene-CCO53_RS22305;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=CCO53_RS22305;old_locus_tag=CCO53_22265 NZ_NPLZ01000018.1 Protein Homology CDS 41410 42105 . - 0 ID=cds-WP_001234836.1;Parent=gene-CCO53_RS22305;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=CCO53_RS22305;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 42257 44017 . + . ID=gene-CCO53_RS22310;Name=CCO53_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22310;old_locus_tag=CCO53_22270 NZ_NPLZ01000018.1 Protein Homology CDS 42257 44017 . + 0 ID=cds-WP_000578121.1;Parent=gene-CCO53_RS22310;Dbxref=GenBank:WP_000578121.1;Name=WP_000578121.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=CCO53_RS22310;product=DEAD/DEAH box helicase;protein_id=WP_000578121.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 44142 44426 . + . ID=gene-CCO53_RS22315;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=CCO53_RS22315;old_locus_tag=CCO53_22275 NZ_NPLZ01000018.1 Protein Homology CDS 44142 44426 . + 0 ID=cds-WP_000494192.1;Parent=gene-CCO53_RS22315;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=CCO53_RS22315;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 44535 45155 . - . ID=gene-CCO53_RS22320;Name=CCO53_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22320;old_locus_tag=CCO53_22280 NZ_NPLZ01000018.1 Protein Homology CDS 44535 45155 . - 0 ID=cds-WP_000033429.1;Parent=gene-CCO53_RS22320;Dbxref=GenBank:WP_000033429.1;Name=WP_000033429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=CCO53_RS22320;product=hypothetical protein;protein_id=WP_000033429.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 45183 46190 . - . ID=gene-CCO53_RS22325;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=CCO53_RS22325;old_locus_tag=CCO53_22285 NZ_NPLZ01000018.1 Protein Homology CDS 45183 46190 . - 0 ID=cds-WP_000050806.1;Parent=gene-CCO53_RS22325;Dbxref=GenBank:WP_000050806.1;Name=WP_000050806.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=CCO53_RS22325;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 46370 46597 . + . ID=gene-CCO53_RS22330;Name=CCO53_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22330;old_locus_tag=CCO53_22290 NZ_NPLZ01000018.1 Protein Homology CDS 46370 46597 . + 0 ID=cds-WP_001135904.1;Parent=gene-CCO53_RS22330;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=CCO53_RS22330;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 46629 48389 . + . ID=gene-CCO53_RS22335;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=CCO53_RS22335;old_locus_tag=CCO53_22295 NZ_NPLZ01000018.1 Protein Homology CDS 46629 48389 . + 0 ID=cds-WP_094887835.1;Parent=gene-CCO53_RS22335;Dbxref=GenBank:WP_094887835.1;Name=WP_094887835.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=CCO53_RS22335;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_094887835.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 48463 48539 . + . ID=gene-CCO53_RS22340;Name=CCO53_RS22340;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS22340;old_locus_tag=CCO53_22300 NZ_NPLZ01000018.1 tRNAscan-SE tRNA 48463 48539 . + . ID=rna-CCO53_RS22340;Parent=gene-CCO53_RS22340;anticodon=(pos:48497..48499);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS22340;product=tRNA-Pro NZ_NPLZ01000018.1 tRNAscan-SE exon 48463 48539 . + . ID=exon-CCO53_RS22340-1;Parent=rna-CCO53_RS22340;anticodon=(pos:48497..48499);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS22340;product=tRNA-Pro NZ_NPLZ01000018.1 RefSeq pseudogene 48495 48578 . + . ID=gene-CCO53_RS24120;Name=CCO53_RS24120;end_range=48578,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24120;old_locus_tag=CCO53_22305;partial=true;pseudo=true NZ_NPLZ01000018.1 Protein Homology CDS 48495 48578 . + 0 ID=cds-CCO53_RS24120;Parent=gene-CCO53_RS24120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=48578,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=CCO53_RS24120;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 48582 48770 . + . ID=gene-CCO53_RS22350;Name=CCO53_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22350;old_locus_tag=CCO53_22310 NZ_NPLZ01000018.1 Protein Homology CDS 48582 48770 . + 0 ID=cds-WP_023201649.1;Parent=gene-CCO53_RS22350;Dbxref=GenBank:WP_023201649.1;Name=WP_023201649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=CCO53_RS22350;product=DinI-like family protein;protein_id=WP_023201649.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 48963 49526 . - . ID=gene-CCO53_RS22355;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=CCO53_RS22355;old_locus_tag=CCO53_22315 NZ_NPLZ01000018.1 Protein Homology CDS 48963 49526 . - 0 ID=cds-WP_000281868.1;Parent=gene-CCO53_RS22355;Dbxref=GenBank:WP_000281868.1;Name=WP_000281868.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=CCO53_RS22355;product=lipid A 3-O-deacylase PagL;protein_id=WP_000281868.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 50345 50992 . + . ID=gene-CCO53_RS22370;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=CCO53_RS22370;old_locus_tag=CCO53_22330 NZ_NPLZ01000018.1 Protein Homology CDS 50345 50992 . + 0 ID=cds-WP_001115500.1;Parent=gene-CCO53_RS22370;Dbxref=GenBank:WP_001115500.1;Name=WP_001115500.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=CCO53_RS22370;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115500.1;transl_table=11 NZ_NPLZ01000018.1 RefSeq gene 51036 51266 . - . ID=gene-CCO53_RS22375;Name=CCO53_RS22375;end_range=51266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22375;old_locus_tag=CCO53_22335;partial=true NZ_NPLZ01000018.1 Protein Homology CDS 51036 51266 . - 0 ID=cds-WP_367859205.1;Parent=gene-CCO53_RS22375;Dbxref=GenBank:WP_367859205.1;Name=WP_367859205.1;Ontology_term=GO:0005515;end_range=51266,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO53_RS22375;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_367859205.1;transl_table=11 ##sequence-region NZ_NPLZ01000019.1 1 47075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000019.1 RefSeq region 1 47075 . + . ID=NZ_NPLZ01000019.1:1..47075;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000019.1 RefSeq pseudogene 1 126 . - . ID=gene-CCO53_RS22380;Name=CCO53_RS22380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS22380;partial=true;pseudo=true;start_range=.,1 NZ_NPLZ01000019.1 Protein Homology CDS 1 126 . - 0 ID=cds-CCO53_RS22380;Parent=gene-CCO53_RS22380;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO53_RS22380;partial=true;product=sodium ion-translocating decarboxylase subunit beta;pseudo=true;start_range=.,1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 139 1908 . - . ID=gene-CCO53_RS22385;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO53_RS22385;old_locus_tag=CCO53_22340 NZ_NPLZ01000019.1 Protein Homology CDS 139 1908 . - 0 ID=cds-WP_058331959.1;Parent=gene-CCO53_RS22385;Dbxref=GenBank:WP_058331959.1;Name=WP_058331959.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO53_RS22385;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_058331959.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 1924 2169 . - . ID=gene-CCO53_RS22390;Name=CCO53_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22390;old_locus_tag=CCO53_22345 NZ_NPLZ01000019.1 Protein Homology CDS 1924 2169 . - 0 ID=cds-WP_080213296.1;Parent=gene-CCO53_RS22390;Dbxref=GenBank:WP_080213296.1;Name=WP_080213296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180124.1;locus_tag=CCO53_RS22390;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_080213296.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 2326 2943 . - . ID=gene-CCO53_RS22395;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=CCO53_RS22395;old_locus_tag=CCO53_22350 NZ_NPLZ01000019.1 Protein Homology CDS 2326 2943 . - 0 ID=cds-WP_000162405.1;Parent=gene-CCO53_RS22395;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=CCO53_RS22395;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 2943 3842 . - . ID=gene-CCO53_RS22400;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=CCO53_RS22400;old_locus_tag=CCO53_22355 NZ_NPLZ01000019.1 Protein Homology CDS 2943 3842 . - 0 ID=cds-WP_000045350.1;Parent=gene-CCO53_RS22400;Dbxref=GenBank:WP_000045350.1;Name=WP_000045350.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=CCO53_RS22400;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045350.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 3875 5143 . - . ID=gene-CCO53_RS22405;Name=CCO53_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22405;old_locus_tag=CCO53_22360 NZ_NPLZ01000019.1 Protein Homology CDS 3875 5143 . - 0 ID=cds-WP_024146113.1;Parent=gene-CCO53_RS22405;Dbxref=GenBank:WP_024146113.1;Name=WP_024146113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=CCO53_RS22405;product=SLC13 family permease;protein_id=WP_024146113.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 5354 6019 . - . ID=gene-CCO53_RS22410;Name=CCO53_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22410;old_locus_tag=CCO53_22365 NZ_NPLZ01000019.1 Protein Homology CDS 5354 6019 . - 0 ID=cds-WP_094887837.1;Parent=gene-CCO53_RS22410;Dbxref=GenBank:WP_094887837.1;Name=WP_094887837.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=CCO53_RS22410;product=GntR family transcriptional regulator;protein_id=WP_094887837.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 6006 6635 . - . ID=gene-CCO53_RS22415;Name=CCO53_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22415;old_locus_tag=CCO53_22370 NZ_NPLZ01000019.1 Protein Homology CDS 6006 6635 . - 0 ID=cds-WP_000723776.1;Parent=gene-CCO53_RS22415;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=CCO53_RS22415;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 6755 7693 . - . ID=gene-CCO53_RS22420;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CCO53_RS22420;old_locus_tag=CCO53_22375 NZ_NPLZ01000019.1 Protein Homology CDS 6755 7693 . - 0 ID=cds-WP_000861586.1;Parent=gene-CCO53_RS22420;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=CCO53_RS22420;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 8108 8578 . + . ID=gene-CCO53_RS22425;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=CCO53_RS22425;old_locus_tag=CCO53_22380 NZ_NPLZ01000019.1 Protein Homology CDS 8108 8578 . + 0 ID=cds-WP_001257852.1;Parent=gene-CCO53_RS22425;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=CCO53_RS22425;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 8943 9206 . + . ID=gene-CCO53_RS22430;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=CCO53_RS22430;old_locus_tag=CCO53_22385 NZ_NPLZ01000019.1 Protein Homology CDS 8943 9206 . + 0 ID=cds-WP_000695695.1;Parent=gene-CCO53_RS22430;Dbxref=GenBank:WP_000695695.1;Name=WP_000695695.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=CCO53_RS22430;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695695.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 9310 9576 . + . ID=gene-CCO53_RS22435;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=CCO53_RS22435;old_locus_tag=CCO53_22390 NZ_NPLZ01000019.1 Protein Homology CDS 9310 9576 . + 0 ID=cds-WP_023201753.1;Parent=gene-CCO53_RS22435;Dbxref=GenBank:WP_023201753.1;Name=WP_023201753.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=CCO53_RS22435;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_023201753.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 9636 9908 . - . ID=gene-CCO53_RS22440;Name=CCO53_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22440;old_locus_tag=CCO53_22395 NZ_NPLZ01000019.1 Protein Homology CDS 9636 9908 . - 0 ID=cds-WP_001103887.1;Parent=gene-CCO53_RS22440;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=CCO53_RS22440;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 10080 12047 . - . ID=gene-CCO53_RS22445;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=CCO53_RS22445;old_locus_tag=CCO53_22400 NZ_NPLZ01000019.1 Protein Homology CDS 10080 12047 . - 0 ID=cds-WP_000510913.1;Parent=gene-CCO53_RS22445;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=CCO53_RS22445;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 12053 12985 . - . ID=gene-CCO53_RS22450;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=CCO53_RS22450;old_locus_tag=CCO53_22405 NZ_NPLZ01000019.1 Protein Homology CDS 12053 12985 . - 0 ID=cds-WP_000855134.1;Parent=gene-CCO53_RS22450;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=CCO53_RS22450;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 12993 13196 . - . ID=gene-CCO53_RS22455;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=CCO53_RS22455;old_locus_tag=CCO53_22410 NZ_NPLZ01000019.1 Protein Homology CDS 12993 13196 . - 0 ID=cds-WP_000051840.1;Parent=gene-CCO53_RS22455;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=CCO53_RS22455;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 13378 14307 . + . ID=gene-CCO53_RS22460;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=CCO53_RS22460;old_locus_tag=CCO53_22415 NZ_NPLZ01000019.1 Protein Homology CDS 13378 14307 . + 0 ID=cds-WP_058331962.1;Parent=gene-CCO53_RS22460;Dbxref=GenBank:WP_058331962.1;Name=WP_058331962.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=CCO53_RS22460;product=HTH-type transcriptional activator AaeR;protein_id=WP_058331962.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 14430 15875 . - . ID=gene-CCO53_RS22465;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=CCO53_RS22465;old_locus_tag=CCO53_22420 NZ_NPLZ01000019.1 Protein Homology CDS 14430 15875 . - 0 ID=cds-WP_000055932.1;Parent=gene-CCO53_RS22465;Dbxref=GenBank:WP_000055932.1;Name=WP_000055932.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=CCO53_RS22465;product=metalloprotease TldD;protein_id=WP_000055932.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 16020 19820 . - . ID=gene-CCO53_RS22470;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=CCO53_RS22470;old_locus_tag=CCO53_22425 NZ_NPLZ01000019.1 Protein Homology CDS 16020 19820 . - 0 ID=cds-WP_094887838.1;Parent=gene-CCO53_RS22470;Dbxref=GenBank:WP_094887838.1;Name=WP_094887838.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=CCO53_RS22470;product=AsmA2 domain-containing protein YhdP;protein_id=WP_094887838.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 19931 21400 . - . ID=gene-CCO53_RS22475;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=CCO53_RS22475;old_locus_tag=CCO53_22430 NZ_NPLZ01000019.1 Protein Homology CDS 19931 21400 . - 0 ID=cds-WP_000123188.1;Parent=gene-CCO53_RS22475;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=CCO53_RS22475;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 21390 21983 . - . ID=gene-CCO53_RS22480;Name=CCO53_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22480;old_locus_tag=CCO53_22435 NZ_NPLZ01000019.1 Protein Homology CDS 21390 21983 . - 0 ID=cds-WP_000210306.1;Parent=gene-CCO53_RS22480;Dbxref=GenBank:WP_000210306.1;Name=WP_000210306.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=CCO53_RS22480;product=Maf family protein;protein_id=WP_000210306.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 21992 22480 . - . ID=gene-CCO53_RS22485;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CCO53_RS22485;old_locus_tag=CCO53_22440 NZ_NPLZ01000019.1 Protein Homology CDS 21992 22480 . - 0 ID=cds-WP_000179403.1;Parent=gene-CCO53_RS22485;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=CCO53_RS22485;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 22483 23535 . - . ID=gene-CCO53_RS22490;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CCO53_RS22490;old_locus_tag=CCO53_22445 NZ_NPLZ01000019.1 Protein Homology CDS 22483 23535 . - 0 ID=cds-WP_000802538.1;Parent=gene-CCO53_RS22490;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=CCO53_RS22490;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 23600 24643 . - . ID=gene-CCO53_RS22495;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=CCO53_RS22495;old_locus_tag=CCO53_22450 NZ_NPLZ01000019.1 Protein Homology CDS 23600 24643 . - 0 ID=cds-WP_000913396.1;Parent=gene-CCO53_RS22495;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=CCO53_RS22495;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 24951 26891 . - . ID=gene-CCO53_RS22510;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=CCO53_RS22510;old_locus_tag=CCO53_22465 NZ_NPLZ01000019.1 Protein Homology CDS 24951 26891 . - 0 ID=cds-WP_001241381.1;Parent=gene-CCO53_RS22510;Dbxref=GenBank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=CCO53_RS22510;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 27095 28069 . + . ID=gene-CCO53_RS22515;Name=CCO53_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22515;old_locus_tag=CCO53_22470 NZ_NPLZ01000019.1 Protein Homology CDS 27095 28069 . + 0 ID=cds-WP_094887839.1;Parent=gene-CCO53_RS22515;Dbxref=GenBank:WP_094887839.1;Name=WP_094887839.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=CCO53_RS22515;product=MDR family oxidoreductase;protein_id=WP_094887839.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 28182 29186 . + . ID=gene-CCO53_RS22520;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=CCO53_RS22520;old_locus_tag=CCO53_22475 NZ_NPLZ01000019.1 Protein Homology CDS 28182 29186 . + 0 ID=cds-WP_094887840.1;Parent=gene-CCO53_RS22520;Dbxref=GenBank:WP_094887840.1;Name=WP_094887840.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=CCO53_RS22520;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_094887840.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 29187 29786 . + . ID=gene-CCO53_RS22525;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=CCO53_RS22525;old_locus_tag=CCO53_22480 NZ_NPLZ01000019.1 Protein Homology CDS 29187 29786 . + 0 ID=cds-WP_001240053.1;Parent=gene-CCO53_RS22525;Dbxref=GenBank:WP_001240053.1;Name=WP_001240053.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=CCO53_RS22525;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240053.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 30179 30649 . + . ID=gene-CCO53_RS22530;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CCO53_RS22530;old_locus_tag=CCO53_22485 NZ_NPLZ01000019.1 Protein Homology CDS 30179 30649 . + 0 ID=cds-WP_000354626.1;Parent=gene-CCO53_RS22530;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=CCO53_RS22530;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 30660 32009 . + . ID=gene-CCO53_RS22535;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CCO53_RS22535;old_locus_tag=CCO53_22490 NZ_NPLZ01000019.1 Protein Homology CDS 30660 32009 . + 0 ID=cds-WP_000884627.1;Parent=gene-CCO53_RS22535;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=CCO53_RS22535;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 32118 32360 . + . ID=gene-CCO53_RS22540;Name=CCO53_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22540;old_locus_tag=CCO53_22495 NZ_NPLZ01000019.1 Protein Homology CDS 32118 32360 . + 0 ID=cds-WP_000340018.1;Parent=gene-CCO53_RS22540;Dbxref=GenBank:WP_000340018.1;Name=WP_000340018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=CCO53_RS22540;product=YhdT family protein;protein_id=WP_000340018.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 32350 33801 . + . ID=gene-CCO53_RS22545;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=CCO53_RS22545;old_locus_tag=CCO53_22500 NZ_NPLZ01000019.1 Protein Homology CDS 32350 33801 . + 0 ID=cds-WP_001175682.1;Parent=gene-CCO53_RS22545;Dbxref=GenBank:WP_001175682.1;Name=WP_001175682.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=CCO53_RS22545;product=sodium/pantothenate symporter;protein_id=WP_001175682.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 33813 34694 . + . ID=gene-CCO53_RS22550;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CCO53_RS22550;old_locus_tag=CCO53_22505 NZ_NPLZ01000019.1 Protein Homology CDS 33813 34694 . + 0 ID=cds-WP_001145849.1;Parent=gene-CCO53_RS22550;Dbxref=GenBank:WP_001145849.1;Name=WP_001145849.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=CCO53_RS22550;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 35354 36319 . + . ID=gene-CCO53_RS22555;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CCO53_RS22555;old_locus_tag=CCO53_22510 NZ_NPLZ01000019.1 Protein Homology CDS 35354 36319 . + 0 ID=cds-WP_001219664.1;Parent=gene-CCO53_RS22555;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=CCO53_RS22555;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 36345 36641 . + . ID=gene-CCO53_RS22560;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=CCO53_RS22560;old_locus_tag=CCO53_22515 NZ_NPLZ01000019.1 Protein Homology CDS 36345 36641 . + 0 ID=cds-WP_000462905.1;Parent=gene-CCO53_RS22560;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=CCO53_RS22560;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 36727 37611 . + . ID=gene-CCO53_RS22565;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=CCO53_RS22565;old_locus_tag=CCO53_22520 NZ_NPLZ01000019.1 Protein Homology CDS 36727 37611 . + 0 ID=cds-WP_000642611.1;Parent=gene-CCO53_RS22565;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=CCO53_RS22565;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 37694 37858 . + . ID=gene-CCO53_RS22570;Name=CCO53_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22570;old_locus_tag=CCO53_22525 NZ_NPLZ01000019.1 Protein Homology CDS 37694 37858 . + 0 ID=cds-WP_000620015.1;Parent=gene-CCO53_RS22570;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=CCO53_RS22570;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 38009 40108 . + . ID=gene-CCO53_RS22575;Name=CCO53_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22575;old_locus_tag=CCO53_22530 NZ_NPLZ01000019.1 Protein Homology CDS 38009 40108 . + 0 ID=cds-WP_058331966.1;Parent=gene-CCO53_RS22575;Dbxref=GenBank:WP_058331966.1;Name=WP_058331966.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=CCO53_RS22575;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_058331966.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 40111 40773 . - . ID=gene-CCO53_RS22580;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=CCO53_RS22580;old_locus_tag=CCO53_22535 NZ_NPLZ01000019.1 Protein Homology CDS 40111 40773 . - 0 ID=cds-WP_001085725.1;Parent=gene-CCO53_RS22580;Dbxref=GenBank:WP_001085725.1;Name=WP_001085725.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=CCO53_RS22580;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085725.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 41187 42344 . + . ID=gene-CCO53_RS22585;Name=CCO53_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22585;old_locus_tag=CCO53_22540 NZ_NPLZ01000019.1 Protein Homology CDS 41187 42344 . + 0 ID=cds-WP_094887841.1;Parent=gene-CCO53_RS22585;Dbxref=GenBank:WP_094887841.1;Name=WP_094887841.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=CCO53_RS22585;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_094887841.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 42356 45469 . + . ID=gene-CCO53_RS22590;Name=CCO53_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22590;old_locus_tag=CCO53_22545 NZ_NPLZ01000019.1 Protein Homology CDS 42356 45469 . + 0 ID=cds-WP_001273283.1;Parent=gene-CCO53_RS22590;Dbxref=GenBank:WP_001273283.1;Name=WP_001273283.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=CCO53_RS22590;product=efflux RND transporter permease subunit;protein_id=WP_001273283.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 45705 45926 . + . ID=gene-CCO53_RS22595;Name=CCO53_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22595;old_locus_tag=CCO53_22550 NZ_NPLZ01000019.1 Protein Homology CDS 45705 45926 . + 0 ID=cds-WP_000825645.1;Parent=gene-CCO53_RS22595;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=CCO53_RS22595;product=membrane protein;protein_id=WP_000825645.1;transl_table=11 NZ_NPLZ01000019.1 RefSeq gene 46711 46826 . - . ID=gene-CCO53_RS22600;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO53_RS22600;old_locus_tag=CCO53_22555 NZ_NPLZ01000019.1 cmsearch rRNA 46711 46826 . - . ID=rna-CCO53_RS22600;Parent=gene-CCO53_RS22600;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS22600;product=5S ribosomal RNA NZ_NPLZ01000019.1 cmsearch exon 46711 46826 . - . ID=exon-CCO53_RS22600-1;Parent=rna-CCO53_RS22600;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS22600;product=5S ribosomal RNA NZ_NPLZ01000019.1 RefSeq gene 46866 46941 . - . ID=gene-CCO53_RS22605;Name=CCO53_RS22605;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS22605;old_locus_tag=CCO53_22560 NZ_NPLZ01000019.1 tRNAscan-SE tRNA 46866 46941 . - . ID=rna-CCO53_RS22605;Parent=gene-CCO53_RS22605;anticodon=(pos:complement(46906..46908));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS22605;product=tRNA-Thr NZ_NPLZ01000019.1 tRNAscan-SE exon 46866 46941 . - . ID=exon-CCO53_RS22605-1;Parent=rna-CCO53_RS22605;anticodon=(pos:complement(46906..46908));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS22605;product=tRNA-Thr NZ_NPLZ01000019.1 RefSeq gene 46956 47071 . - . ID=gene-CCO53_RS22610;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO53_RS22610;old_locus_tag=CCO53_22565 NZ_NPLZ01000019.1 cmsearch rRNA 46956 47071 . - . ID=rna-CCO53_RS22610;Parent=gene-CCO53_RS22610;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS22610;product=5S ribosomal RNA NZ_NPLZ01000019.1 cmsearch exon 46956 47071 . - . ID=exon-CCO53_RS22610-1;Parent=rna-CCO53_RS22610;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS22610;product=5S ribosomal RNA ##sequence-region NZ_NPLZ01000002.1 1 495725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000002.1 RefSeq region 1 495725 . + . ID=NZ_NPLZ01000002.1:1..495725;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000002.1 RefSeq gene 1 350 . + . ID=gene-CCO53_RS03600;Name=CCO53_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03600;old_locus_tag=CCO53_03590;partial=true;start_range=.,1 NZ_NPLZ01000002.1 Protein Homology CDS 1 350 . + 2 ID=cds-WP_094887562.1;Parent=gene-CCO53_RS03600;Dbxref=GenBank:WP_094887562.1;Name=WP_094887562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO53_RS03600;partial=true;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_094887562.1;start_range=.,1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 352 1209 . + . ID=gene-CCO53_RS03605;Name=CCO53_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03605;old_locus_tag=CCO53_03595 NZ_NPLZ01000002.1 Protein Homology CDS 352 1209 . + 0 ID=cds-WP_000534698.1;Parent=gene-CCO53_RS03605;Dbxref=GenBank:WP_000534698.1;Name=WP_000534698.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=CCO53_RS03605;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534698.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 1252 1866 . + . ID=gene-CCO53_RS03610;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=CCO53_RS03610;old_locus_tag=CCO53_03600 NZ_NPLZ01000002.1 Protein Homology CDS 1252 1866 . + 0 ID=cds-WP_000206571.1;Parent=gene-CCO53_RS03610;Dbxref=GenBank:WP_000206571.1;Name=WP_000206571.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=CCO53_RS03610;product=Tat proofreading chaperone DmsD;protein_id=WP_000206571.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 2171 2881 . + . ID=gene-CCO53_RS03615;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO53_RS03615;old_locus_tag=CCO53_03605 NZ_NPLZ01000002.1 Protein Homology CDS 2171 2881 . + 0 ID=cds-WP_000557304.1;Parent=gene-CCO53_RS03615;Dbxref=GenBank:WP_000557304.1;Name=WP_000557304.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=CCO53_RS03615;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000557304.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 2910 3812 . + . ID=gene-CCO53_RS03620;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=CCO53_RS03620;old_locus_tag=CCO53_03610 NZ_NPLZ01000002.1 Protein Homology CDS 2910 3812 . + 0 ID=cds-WP_001211193.1;Parent=gene-CCO53_RS03620;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=CCO53_RS03620;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 3822 4469 . + . ID=gene-CCO53_RS03625;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=CCO53_RS03625;old_locus_tag=CCO53_03615 NZ_NPLZ01000002.1 Protein Homology CDS 3822 4469 . + 0 ID=cds-WP_000379677.1;Parent=gene-CCO53_RS03625;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=CCO53_RS03625;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 4469 5617 . + . ID=gene-CCO53_RS03630;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=CCO53_RS03630;old_locus_tag=CCO53_03620 NZ_NPLZ01000002.1 Protein Homology CDS 4469 5617 . + 0 ID=cds-WP_080088253.1;Parent=gene-CCO53_RS03630;Dbxref=GenBank:WP_080088253.1;Name=WP_080088253.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=CCO53_RS03630;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_080088253.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 5753 7042 . + . ID=gene-CCO53_RS03635;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=CCO53_RS03635;old_locus_tag=CCO53_03625 NZ_NPLZ01000002.1 Protein Homology CDS 5753 7042 . + 0 ID=cds-WP_000554911.1;Parent=gene-CCO53_RS03635;Dbxref=GenBank:WP_000554911.1;Name=WP_000554911.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=CCO53_RS03635;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554911.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 6998 7693 . - . ID=gene-CCO53_RS03640;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO53_RS03640;old_locus_tag=CCO53_03630 NZ_NPLZ01000002.1 Protein Homology CDS 6998 7693 . - 0 ID=cds-WP_000919206.1;Parent=gene-CCO53_RS03640;Dbxref=GenBank:WP_000919206.1;Name=WP_000919206.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=CCO53_RS03640;product=dethiobiotin synthase;protein_id=WP_000919206.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 7819 9039 . - . ID=gene-CCO53_RS03645;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=CCO53_RS03645;old_locus_tag=CCO53_03635 NZ_NPLZ01000002.1 Protein Homology CDS 7819 9039 . - 0 ID=cds-WP_000225092.1;Parent=gene-CCO53_RS03645;Dbxref=GenBank:WP_000225092.1;Name=WP_000225092.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=CCO53_RS03645;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225092.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 9167 10066 . - . ID=gene-CCO53_RS03655;Name=CCO53_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03655;old_locus_tag=CCO53_03645 NZ_NPLZ01000002.1 Protein Homology CDS 9167 10066 . - 0 ID=cds-WP_076726527.1;Parent=gene-CCO53_RS03655;Dbxref=GenBank:WP_076726527.1;Name=WP_076726527.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=CCO53_RS03655;product=LysR family transcriptional regulator;protein_id=WP_076726527.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 10186 11439 . + . ID=gene-CCO53_RS03660;Name=CCO53_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03660;old_locus_tag=CCO53_03650 NZ_NPLZ01000002.1 Protein Homology CDS 10186 11439 . + 0 ID=cds-WP_080160597.1;Parent=gene-CCO53_RS03660;Dbxref=GenBank:WP_080160597.1;Name=WP_080160597.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=CCO53_RS03660;product=MFS transporter;protein_id=WP_080160597.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 11506 11598 . - . ID=gene-CCO53_RS23940;Name=CCO53_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23940 NZ_NPLZ01000002.1 Protein Homology CDS 11506 11598 . - 0 ID=cds-WP_217805199.1;Parent=gene-CCO53_RS23940;Dbxref=GenBank:WP_217805199.1;Name=WP_217805199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=CCO53_RS23940;product=KPN_01571 family protein;protein_id=WP_217805199.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 11834 12085 . + . ID=gene-CCO53_RS03665;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=CCO53_RS03665;old_locus_tag=CCO53_03655 NZ_NPLZ01000002.1 Protein Homology CDS 11834 12085 . + 0 ID=cds-WP_125855798.1;Parent=gene-CCO53_RS03665;Dbxref=GenBank:WP_125855798.1;Name=WP_125855798.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=CCO53_RS03665;product=acid resistance repetitive basic protein Asr;protein_id=WP_125855798.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 12354 13175 . + . ID=gene-CCO53_RS03675;Name=CCO53_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03675;old_locus_tag=CCO53_03665 NZ_NPLZ01000002.1 Protein Homology CDS 12354 13175 . + 0 ID=cds-WP_000549647.1;Parent=gene-CCO53_RS03675;Dbxref=GenBank:WP_000549647.1;Name=WP_000549647.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=CCO53_RS03675;product=trypsin-like serine peptidase;protein_id=WP_000549647.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 13210 13539 . - . ID=gene-CCO53_RS03680;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=CCO53_RS03680;old_locus_tag=CCO53_03670 NZ_NPLZ01000002.1 Protein Homology CDS 13210 13539 . - 0 ID=cds-WP_001183821.1;Parent=gene-CCO53_RS03680;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=CCO53_RS03680;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 13526 13888 . - . ID=gene-CCO53_RS03685;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=CCO53_RS03685;old_locus_tag=CCO53_03675 NZ_NPLZ01000002.1 Protein Homology CDS 13526 13888 . - 0 ID=cds-WP_000500278.1;Parent=gene-CCO53_RS03685;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=CCO53_RS03685;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 14000 14170 . - . ID=gene-CCO53_RS24310;Name=CCO53_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24310;old_locus_tag=CCO53_03680 NZ_NPLZ01000002.1 Protein Homology CDS 14000 14170 . - 0 ID=cds-WP_001539987.1;Parent=gene-CCO53_RS24310;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=CCO53_RS24310;product=hypothetical protein;protein_id=WP_001539987.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 14306 15340 . + . ID=gene-CCO53_RS03695;Name=CCO53_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03695;old_locus_tag=CCO53_03685 NZ_NPLZ01000002.1 Protein Homology CDS 14306 15340 . + 0 ID=cds-WP_001118267.1;Parent=gene-CCO53_RS03695;Dbxref=GenBank:WP_001118267.1;Name=WP_001118267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=CCO53_RS03695;product=AI-2E family transporter;protein_id=WP_001118267.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 15515 16903 . - . ID=gene-CCO53_RS03700;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=CCO53_RS03700;old_locus_tag=CCO53_03690 NZ_NPLZ01000002.1 Protein Homology CDS 15515 16903 . - 0 ID=cds-WP_000014056.1;Parent=gene-CCO53_RS03700;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=CCO53_RS03700;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 16914 18443 . - . ID=gene-CCO53_RS03705;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=CCO53_RS03705;old_locus_tag=CCO53_03695 NZ_NPLZ01000002.1 Protein Homology CDS 16914 18443 . - 0 ID=cds-WP_079944755.1;Parent=gene-CCO53_RS03705;Dbxref=GenBank:WP_079944755.1;Name=WP_079944755.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=CCO53_RS03705;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_079944755.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 18970 19914 . + . ID=gene-CCO53_RS03710;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=CCO53_RS03710;old_locus_tag=CCO53_03700 NZ_NPLZ01000002.1 Protein Homology CDS 18970 19914 . + 0 ID=cds-WP_000769294.1;Parent=gene-CCO53_RS03710;Dbxref=GenBank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=CCO53_RS03710;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 20213 21595 . + . ID=gene-CCO53_RS03715;Name=CCO53_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03715;old_locus_tag=CCO53_03705 NZ_NPLZ01000002.1 Protein Homology CDS 20213 21595 . + 0 ID=cds-WP_000412353.1;Parent=gene-CCO53_RS03715;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=CCO53_RS03715;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 21657 21992 . - . ID=gene-CCO53_RS03720;Name=CCO53_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03720;old_locus_tag=CCO53_03710 NZ_NPLZ01000002.1 Protein Homology CDS 21657 21992 . - 0 ID=cds-WP_000524877.1;Parent=gene-CCO53_RS03720;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=CCO53_RS03720;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 22119 22850 . + . ID=gene-CCO53_RS03725;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=CCO53_RS03725;old_locus_tag=CCO53_03715 NZ_NPLZ01000002.1 Protein Homology CDS 22119 22850 . + 0 ID=cds-WP_001080048.1;Parent=gene-CCO53_RS03725;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=CCO53_RS03725;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 23329 24480 . + . ID=gene-CCO53_RS03735;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=CCO53_RS03735;old_locus_tag=CCO53_03725 NZ_NPLZ01000002.1 Protein Homology CDS 23329 24480 . + 0 ID=cds-WP_000824320.1;Parent=gene-CCO53_RS03735;Dbxref=GenBank:WP_000824320.1;Name=WP_000824320.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=CCO53_RS03735;product=porin OmpS2;protein_id=WP_000824320.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 24633 26339 . + . ID=gene-CCO53_RS03740;Name=CCO53_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03740;old_locus_tag=CCO53_03730 NZ_NPLZ01000002.1 Protein Homology CDS 24633 26339 . + 0 ID=cds-WP_080160596.1;Parent=gene-CCO53_RS03740;Dbxref=GenBank:WP_080160596.1;Name=WP_080160596.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=CCO53_RS03740;product=amidohydrolase;protein_id=WP_080160596.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 26450 27751 . + . ID=gene-CCO53_RS03745;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=CCO53_RS03745;old_locus_tag=CCO53_03735 NZ_NPLZ01000002.1 Protein Homology CDS 26450 27751 . + 0 ID=cds-WP_000732953.1;Parent=gene-CCO53_RS03745;Dbxref=GenBank:WP_000732953.1;Name=WP_000732953.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=CCO53_RS03745;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732953.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 27827 28756 . + . ID=gene-CCO53_RS03750;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=CCO53_RS03750;old_locus_tag=CCO53_03740 NZ_NPLZ01000002.1 Protein Homology CDS 27827 28756 . + 0 ID=cds-WP_000092492.1;Parent=gene-CCO53_RS03750;Dbxref=GenBank:WP_000092492.1;Name=WP_000092492.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=CCO53_RS03750;product=DNA replication terminus site-binding protein;protein_id=WP_000092492.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 28753 30156 . - . ID=gene-CCO53_RS03755;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CCO53_RS03755;old_locus_tag=CCO53_03745 NZ_NPLZ01000002.1 Protein Homology CDS 28753 30156 . - 0 ID=cds-WP_000259117.1;Parent=gene-CCO53_RS03755;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=CCO53_RS03755;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 30324 31970 . - . ID=gene-CCO53_RS03760;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=CCO53_RS03760;old_locus_tag=CCO53_03750 NZ_NPLZ01000002.1 Protein Homology CDS 30324 31970 . - 0 ID=cds-WP_000066609.1;Parent=gene-CCO53_RS03760;Dbxref=GenBank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=CCO53_RS03760;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 32170 33345 . + . ID=gene-CCO53_RS03765;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CCO53_RS03765;old_locus_tag=CCO53_03755 NZ_NPLZ01000002.1 Protein Homology CDS 32170 33345 . + 0 ID=cds-WP_001170624.1;Parent=gene-CCO53_RS03765;Dbxref=GenBank:WP_001170624.1;Name=WP_001170624.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=CCO53_RS03765;product=mannose-6-phosphate isomerase;protein_id=WP_001170624.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 33448 34956 . + . ID=gene-CCO53_RS03770;Name=CCO53_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03770;old_locus_tag=CCO53_03760 NZ_NPLZ01000002.1 Protein Homology CDS 33448 34956 . + 0 ID=cds-WP_000753331.1;Parent=gene-CCO53_RS03770;Dbxref=GenBank:WP_000753331.1;Name=WP_000753331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=CCO53_RS03770;product=YdgA family protein;protein_id=WP_000753331.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 35014 36042 . - . ID=gene-CCO53_RS03775;Name=CCO53_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03775;old_locus_tag=CCO53_03765 NZ_NPLZ01000002.1 Protein Homology CDS 35014 36042 . - 0 ID=cds-WP_000951918.1;Parent=gene-CCO53_RS03775;Dbxref=GenBank:WP_000951918.1;Name=WP_000951918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=CCO53_RS03775;product=Mal regulon transcriptional regulator MalI;protein_id=WP_000951918.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 36215 37807 . + . ID=gene-CCO53_RS03780;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=CCO53_RS03780;old_locus_tag=CCO53_03770 NZ_NPLZ01000002.1 Protein Homology CDS 36215 37807 . + 0 ID=cds-WP_000208903.1;Parent=gene-CCO53_RS03780;Dbxref=GenBank:WP_000208903.1;Name=WP_000208903.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=malX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=CCO53_RS03780;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_000208903.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 37817 38989 . + . ID=gene-CCO53_RS03785;Name=CCO53_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03785;old_locus_tag=CCO53_03775 NZ_NPLZ01000002.1 Protein Homology CDS 37817 38989 . + 0 ID=cds-WP_023223277.1;Parent=gene-CCO53_RS03785;Dbxref=GenBank:WP_023223277.1;Name=WP_023223277.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=CCO53_RS03785;product=MalY/PatB family protein;protein_id=WP_023223277.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 39207 40208 . + . ID=gene-CCO53_RS03790;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CCO53_RS03790;old_locus_tag=CCO53_03780 NZ_NPLZ01000002.1 Protein Homology CDS 39207 40208 . + 0 ID=cds-WP_000565566.1;Parent=gene-CCO53_RS03790;Dbxref=GenBank:WP_000565566.1;Name=WP_000565566.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=CCO53_RS03790;product=adenosine deaminase;protein_id=WP_000565566.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 40282 41322 . - . ID=gene-CCO53_RS03795;Name=CCO53_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03795;old_locus_tag=CCO53_03785 NZ_NPLZ01000002.1 Protein Homology CDS 40282 41322 . - 0 ID=cds-WP_000998242.1;Parent=gene-CCO53_RS03795;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=CCO53_RS03795;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 41530 41655 . + . ID=gene-CCO53_RS03800;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=CCO53_RS03800;old_locus_tag=CCO53_03790 NZ_NPLZ01000002.1 Protein Homology CDS 41530 41655 . + 0 ID=cds-WP_001708800.1;Parent=gene-CCO53_RS03800;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=CCO53_RS03800;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 41953 42168 . + . ID=gene-CCO53_RS03805;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=CCO53_RS03805;old_locus_tag=CCO53_03795 NZ_NPLZ01000002.1 Protein Homology CDS 41953 42168 . + 0 ID=cds-WP_000217946.1;Parent=gene-CCO53_RS03805;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=CCO53_RS03805;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 42257 42697 . + . ID=gene-CCO53_RS03810;Name=CCO53_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03810;old_locus_tag=CCO53_03800 NZ_NPLZ01000002.1 Protein Homology CDS 42257 42697 . + 0 ID=cds-WP_000214061.1;Parent=gene-CCO53_RS03810;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=CCO53_RS03810;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 42774 43355 . + . ID=gene-CCO53_RS03815;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=CCO53_RS03815;old_locus_tag=CCO53_03805 NZ_NPLZ01000002.1 Protein Homology CDS 42774 43355 . + 0 ID=cds-WP_000133179.1;Parent=gene-CCO53_RS03815;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=CCO53_RS03815;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 43355 43933 . + . ID=gene-CCO53_RS03820;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=CCO53_RS03820;old_locus_tag=CCO53_03810 NZ_NPLZ01000002.1 Protein Homology CDS 43355 43933 . + 0 ID=cds-WP_001092600.1;Parent=gene-CCO53_RS03820;Dbxref=GenBank:WP_001092600.1;Name=WP_001092600.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=CCO53_RS03820;product=electron transport complex subunit RsxB;protein_id=WP_001092600.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 43926 46040 . + . ID=gene-CCO53_RS03825;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=CCO53_RS03825;old_locus_tag=CCO53_03815 NZ_NPLZ01000002.1 Protein Homology CDS 43926 46040 . + 0 ID=cds-WP_094887563.1;Parent=gene-CCO53_RS03825;Dbxref=GenBank:WP_094887563.1;Name=WP_094887563.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=CCO53_RS03825;product=electron transport complex subunit RsxC;protein_id=WP_094887563.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 46041 47099 . + . ID=gene-CCO53_RS03830;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=CCO53_RS03830;old_locus_tag=CCO53_03820 NZ_NPLZ01000002.1 Protein Homology CDS 46041 47099 . + 0 ID=cds-WP_000231891.1;Parent=gene-CCO53_RS03830;Dbxref=GenBank:WP_000231891.1;Name=WP_000231891.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=CCO53_RS03830;product=electron transport complex subunit RsxD;protein_id=WP_000231891.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 47103 47723 . + . ID=gene-CCO53_RS03835;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=CCO53_RS03835;old_locus_tag=CCO53_03825 NZ_NPLZ01000002.1 Protein Homology CDS 47103 47723 . + 0 ID=cds-WP_000920822.1;Parent=gene-CCO53_RS03835;Dbxref=GenBank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=CCO53_RS03835;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 47726 48418 . + . ID=gene-CCO53_RS03840;Name=CCO53_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03840;old_locus_tag=CCO53_03830 NZ_NPLZ01000002.1 Protein Homology CDS 47726 48418 . + 0 ID=cds-WP_001289628.1;Parent=gene-CCO53_RS03840;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=CCO53_RS03840;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 48418 49053 . + . ID=gene-CCO53_RS03845;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CCO53_RS03845;old_locus_tag=CCO53_03835 NZ_NPLZ01000002.1 Protein Homology CDS 48418 49053 . + 0 ID=cds-WP_001030318.1;Parent=gene-CCO53_RS03845;Dbxref=GenBank:WP_001030318.1;Name=WP_001030318.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=CCO53_RS03845;product=endonuclease III;protein_id=WP_001030318.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 49655 51160 . + . ID=gene-CCO53_RS03850;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=CCO53_RS03850;old_locus_tag=CCO53_03840 NZ_NPLZ01000002.1 Protein Homology CDS 49655 51160 . + 0 ID=cds-WP_000100911.1;Parent=gene-CCO53_RS03850;Dbxref=GenBank:WP_000100911.1;Name=WP_000100911.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=CCO53_RS03850;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100911.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 51265 51870 . + . ID=gene-CCO53_RS03855;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=CCO53_RS03855;old_locus_tag=CCO53_03845 NZ_NPLZ01000002.1 Protein Homology CDS 51265 51870 . + 0 ID=cds-WP_000765716.1;Parent=gene-CCO53_RS03855;Dbxref=GenBank:WP_000765716.1;Name=WP_000765716.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=CCO53_RS03855;product=glutathione transferase GstA;protein_id=WP_000765716.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 51929 52789 . - . ID=gene-CCO53_RS03860;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=CCO53_RS03860;old_locus_tag=CCO53_03850 NZ_NPLZ01000002.1 Protein Homology CDS 51929 52789 . - 0 ID=cds-WP_000789736.1;Parent=gene-CCO53_RS03860;Dbxref=GenBank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=CCO53_RS03860;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 52849 54123 . - . ID=gene-CCO53_RS03865;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CCO53_RS03865;old_locus_tag=CCO53_03855 NZ_NPLZ01000002.1 Protein Homology CDS 52849 54123 . - 0 ID=cds-WP_000168626.1;Parent=gene-CCO53_RS03865;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=CCO53_RS03865;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 54250 54906 . - . ID=gene-CCO53_RS03870;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=CCO53_RS03870;old_locus_tag=CCO53_03860 NZ_NPLZ01000002.1 Protein Homology CDS 54250 54906 . - 0 ID=cds-WP_001282334.1;Parent=gene-CCO53_RS03870;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=CCO53_RS03870;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 54965 55294 . - . ID=gene-CCO53_RS03875;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=CCO53_RS03875;old_locus_tag=CCO53_03865 NZ_NPLZ01000002.1 Protein Homology CDS 54965 55294 . - 0 ID=cds-WP_058331516.1;Parent=gene-CCO53_RS03875;Dbxref=GenBank:WP_058331516.1;Name=WP_058331516.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=CCO53_RS03875;product=C-type lysozyme inhibitor;protein_id=WP_058331516.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 55382 56503 . - . ID=gene-CCO53_RS03880;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=CCO53_RS03880;old_locus_tag=CCO53_03870 NZ_NPLZ01000002.1 Protein Homology CDS 55382 56503 . - 0 ID=cds-WP_000835021.1;Parent=gene-CCO53_RS03880;Dbxref=GenBank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=CCO53_RS03880;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 56776 57243 . + . ID=gene-CCO53_RS03885;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=CCO53_RS03885;old_locus_tag=CCO53_03875 NZ_NPLZ01000002.1 Protein Homology CDS 56776 57243 . + 0 ID=cds-WP_000597179.1;Parent=gene-CCO53_RS03885;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=CCO53_RS03885;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 57291 57731 . - . ID=gene-CCO53_RS03890;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=CCO53_RS03890;old_locus_tag=CCO53_03880 NZ_NPLZ01000002.1 Protein Homology CDS 57291 57731 . - 0 ID=cds-WP_000764554.1;Parent=gene-CCO53_RS03890;Dbxref=GenBank:WP_000764554.1;Name=WP_000764554.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=CCO53_RS03890;product=transcriptional regulator SlyA;protein_id=WP_000764554.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 57926 58162 . + . ID=gene-CCO53_RS03895;Name=CCO53_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03895;old_locus_tag=CCO53_03885 NZ_NPLZ01000002.1 Protein Homology CDS 57926 58162 . + 0 ID=cds-WP_000649756.1;Parent=gene-CCO53_RS03895;Dbxref=GenBank:WP_000649756.1;Name=WP_000649756.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=CCO53_RS03895;product=DUF1656 domain-containing protein;protein_id=WP_000649756.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 58165 59025 . + . ID=gene-CCO53_RS03900;Name=CCO53_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03900;old_locus_tag=CCO53_03890 NZ_NPLZ01000002.1 Protein Homology CDS 58165 59025 . + 0 ID=cds-WP_001538147.1;Parent=gene-CCO53_RS03900;Dbxref=GenBank:WP_001538147.1;Name=WP_001538147.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=CCO53_RS03900;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001538147.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 59025 61064 . + . ID=gene-CCO53_RS03905;Name=CCO53_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03905;old_locus_tag=CCO53_03895 NZ_NPLZ01000002.1 Protein Homology CDS 59025 61064 . + 0 ID=cds-WP_058331518.1;Parent=gene-CCO53_RS03905;Dbxref=GenBank:WP_058331518.1;Name=WP_058331518.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=CCO53_RS03905;product=FUSC family protein;protein_id=WP_058331518.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 61040 61561 . - . ID=gene-CCO53_RS03910;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=CCO53_RS03910;old_locus_tag=CCO53_03900 NZ_NPLZ01000002.1 Protein Homology CDS 61040 61561 . - 0 ID=cds-WP_000826820.1;Parent=gene-CCO53_RS03910;Dbxref=GenBank:WP_000826820.1;Name=WP_000826820.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=CCO53_RS03910;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826820.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 61641 62537 . - . ID=gene-CCO53_RS03915;Name=CCO53_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03915;old_locus_tag=CCO53_03905 NZ_NPLZ01000002.1 Protein Homology CDS 61641 62537 . - 0 ID=cds-WP_001727487.1;Parent=gene-CCO53_RS03915;Dbxref=GenBank:WP_001727487.1;Name=WP_001727487.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=CCO53_RS03915;product=aldo/keto reductase;protein_id=WP_001727487.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 62588 62827 . - . ID=gene-CCO53_RS03920;Name=CCO53_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03920;old_locus_tag=CCO53_03910 NZ_NPLZ01000002.1 Protein Homology CDS 62588 62827 . - 0 ID=cds-WP_001538148.1;Parent=gene-CCO53_RS03920;Dbxref=GenBank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=CCO53_RS03920;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 62930 63529 . + . ID=gene-CCO53_RS03925;Name=CCO53_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03925;old_locus_tag=CCO53_03915 NZ_NPLZ01000002.1 Protein Homology CDS 62930 63529 . + 0 ID=cds-WP_001041823.1;Parent=gene-CCO53_RS03925;Dbxref=GenBank:WP_001041823.1;Name=WP_001041823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=CCO53_RS03925;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 63588 64685 . + . ID=gene-CCO53_RS03930;Name=CCO53_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03930;old_locus_tag=CCO53_03920 NZ_NPLZ01000002.1 Protein Homology CDS 63588 64685 . + 0 ID=cds-WP_000092944.1;Parent=gene-CCO53_RS03930;Dbxref=GenBank:WP_000092944.1;Name=WP_000092944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=CCO53_RS03930;product=alkene reductase;protein_id=WP_000092944.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 64754 65161 . + . ID=gene-CCO53_RS03935;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=CCO53_RS03935;old_locus_tag=CCO53_03925 NZ_NPLZ01000002.1 Protein Homology CDS 64754 65161 . + 0 ID=cds-WP_001237787.1;Parent=gene-CCO53_RS03935;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=CCO53_RS03935;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 65262 65909 . + . ID=gene-CCO53_RS03940;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=CCO53_RS03940;old_locus_tag=CCO53_03930 NZ_NPLZ01000002.1 Protein Homology CDS 65262 65909 . + 0 ID=cds-WP_001282272.1;Parent=gene-CCO53_RS03940;Dbxref=GenBank:WP_001282272.1;Name=WP_001282272.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=CCO53_RS03940;product=ribonuclease T;protein_id=WP_001282272.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 65987 66334 . - . ID=gene-CCO53_RS03950;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=CCO53_RS03950;old_locus_tag=CCO53_03940 NZ_NPLZ01000002.1 Protein Homology CDS 65987 66334 . - 0 ID=cds-WP_000108176.1;Parent=gene-CCO53_RS03950;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=CCO53_RS03950;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 66669 67490 . + . ID=gene-CCO53_RS03955;Name=CCO53_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03955;old_locus_tag=CCO53_03945 NZ_NPLZ01000002.1 Protein Homology CDS 66669 67490 . + 0 ID=cds-WP_023138185.1;Parent=gene-CCO53_RS03955;Dbxref=GenBank:WP_023138185.1;Name=WP_023138185.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=CCO53_RS03955;product=C40 family peptidase;protein_id=WP_023138185.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 67617 68198 . + . ID=gene-CCO53_RS03960;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=CCO53_RS03960;old_locus_tag=CCO53_03950 NZ_NPLZ01000002.1 Protein Homology CDS 67617 68198 . + 0 ID=cds-WP_094887564.1;Parent=gene-CCO53_RS03960;Dbxref=GenBank:WP_094887564.1;Name=WP_094887564.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=CCO53_RS03960;product=superoxide dismutase [Fe];protein_id=WP_094887564.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 68281 68370 . - . ID=gene-CCO53_RS03965;Name=CCO53_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03965;old_locus_tag=CCO53_03955 NZ_NPLZ01000002.1 Protein Homology CDS 68281 68370 . - 0 ID=cds-WP_000102277.1;Parent=gene-CCO53_RS03965;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=CCO53_RS03965;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 68666 69691 . + . ID=gene-CCO53_RS03975;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CCO53_RS03975;old_locus_tag=CCO53_03965 NZ_NPLZ01000002.1 Protein Homology CDS 68666 69691 . + 0 ID=cds-WP_000190992.1;Parent=gene-CCO53_RS03975;Dbxref=GenBank:WP_000190992.1;Name=WP_000190992.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=CCO53_RS03975;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190992.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 69688 70620 . - . ID=gene-CCO53_RS03980;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=CCO53_RS03980;old_locus_tag=CCO53_03970 NZ_NPLZ01000002.1 Protein Homology CDS 69688 70620 . - 0 ID=cds-WP_000269526.1;Parent=gene-CCO53_RS03980;Dbxref=GenBank:WP_000269526.1;Name=WP_000269526.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=CCO53_RS03980;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269526.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 70733 71938 . + . ID=gene-CCO53_RS03985;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=CCO53_RS03985;old_locus_tag=CCO53_03975 NZ_NPLZ01000002.1 Protein Homology CDS 70733 71938 . + 0 ID=cds-WP_001182318.1;Parent=gene-CCO53_RS03985;Dbxref=GenBank:WP_001182318.1;Name=WP_001182318.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=CCO53_RS03985;product=purine nucleoside transporter PunC;protein_id=WP_001182318.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 72228 73376 . + . ID=gene-CCO53_RS03990;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=CCO53_RS03990;old_locus_tag=CCO53_03980 NZ_NPLZ01000002.1 Protein Homology CDS 72228 73376 . + 0 ID=cds-WP_000098879.1;Parent=gene-CCO53_RS03990;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=CCO53_RS03990;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 73418 74059 . - . ID=gene-CCO53_RS03995;Name=CCO53_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS03995;old_locus_tag=CCO53_03985 NZ_NPLZ01000002.1 Protein Homology CDS 73418 74059 . - 0 ID=cds-WP_058331519.1;Parent=gene-CCO53_RS03995;Dbxref=GenBank:WP_058331519.1;Name=WP_058331519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=CCO53_RS03995;product=riboflavin synthase;protein_id=WP_058331519.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 74276 75649 . + . ID=gene-CCO53_RS04000;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=CCO53_RS04000;old_locus_tag=CCO53_03990 NZ_NPLZ01000002.1 Protein Homology CDS 74276 75649 . + 0 ID=cds-WP_001175077.1;Parent=gene-CCO53_RS04000;Dbxref=GenBank:WP_001175077.1;Name=WP_001175077.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=CCO53_RS04000;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175077.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 75801 75877 . + . ID=gene-CCO53_RS04005;Name=CCO53_RS04005;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS04005;old_locus_tag=CCO53_03995 NZ_NPLZ01000002.1 tRNAscan-SE tRNA 75801 75877 . + . ID=rna-CCO53_RS04005;Parent=gene-CCO53_RS04005;anticodon=(pos:75835..75837);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS04005;product=tRNA-Val NZ_NPLZ01000002.1 tRNAscan-SE exon 75801 75877 . + . ID=exon-CCO53_RS04005-1;Parent=rna-CCO53_RS04005;anticodon=(pos:75835..75837);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS04005;product=tRNA-Val NZ_NPLZ01000002.1 RefSeq gene 75888 75964 . + . ID=gene-CCO53_RS04010;Name=CCO53_RS04010;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS04010;old_locus_tag=CCO53_04000 NZ_NPLZ01000002.1 tRNAscan-SE tRNA 75888 75964 . + . ID=rna-CCO53_RS04010;Parent=gene-CCO53_RS04010;anticodon=(pos:75922..75924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS04010;product=tRNA-Val NZ_NPLZ01000002.1 tRNAscan-SE exon 75888 75964 . + . ID=exon-CCO53_RS04010-1;Parent=rna-CCO53_RS04010;anticodon=(pos:75922..75924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS04010;product=tRNA-Val NZ_NPLZ01000002.1 RefSeq gene 76123 77181 . - . ID=gene-CCO53_RS04015;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=CCO53_RS04015;old_locus_tag=CCO53_04005 NZ_NPLZ01000002.1 Protein Homology CDS 76123 77181 . - 0 ID=cds-WP_058331520.1;Parent=gene-CCO53_RS04015;Dbxref=GenBank:WP_058331520.1;Name=WP_058331520.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=CCO53_RS04015;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_058331520.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 77178 77957 . - . ID=gene-CCO53_RS04020;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=CCO53_RS04020;old_locus_tag=CCO53_04010 NZ_NPLZ01000002.1 Protein Homology CDS 77178 77957 . - 0 ID=cds-WP_080160056.1;Parent=gene-CCO53_RS04020;Dbxref=GenBank:WP_080160056.1;Name=WP_080160056.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=CCO53_RS04020;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_080160056.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 77958 78224 . - . ID=gene-CCO53_RS04025;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=CCO53_RS04025;old_locus_tag=CCO53_04015 NZ_NPLZ01000002.1 Protein Homology CDS 77958 78224 . - 0 ID=cds-WP_000999982.1;Parent=gene-CCO53_RS04025;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=CCO53_RS04025;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 78221 78868 . - . ID=gene-CCO53_RS04030;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=CCO53_RS04030;old_locus_tag=CCO53_04020 NZ_NPLZ01000002.1 Protein Homology CDS 78221 78868 . - 0 ID=cds-WP_058331521.1;Parent=gene-CCO53_RS04030;Dbxref=GenBank:WP_058331521.1;Name=WP_058331521.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=CCO53_RS04030;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_058331521.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 78936 79904 . - . ID=gene-CCO53_RS04035;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=CCO53_RS04035;old_locus_tag=CCO53_04025 NZ_NPLZ01000002.1 Protein Homology CDS 78936 79904 . - 0 ID=cds-WP_058331522.1;Parent=gene-CCO53_RS04035;Dbxref=GenBank:WP_058331522.1;Name=WP_058331522.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=CCO53_RS04035;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_058331522.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 79885 80259 . - . ID=gene-CCO53_RS04040;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=CCO53_RS04040;old_locus_tag=CCO53_04030 NZ_NPLZ01000002.1 Protein Homology CDS 79885 80259 . - 0 ID=cds-WP_001223305.1;Parent=gene-CCO53_RS04040;Dbxref=GenBank:WP_001223305.1;Name=WP_001223305.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=CCO53_RS04040;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223305.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 80240 80617 . - . ID=gene-CCO53_RS04045;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=CCO53_RS04045;old_locus_tag=CCO53_04035 NZ_NPLZ01000002.1 Protein Homology CDS 80240 80617 . - 0 ID=cds-WP_000449089.1;Parent=gene-CCO53_RS04045;Dbxref=GenBank:WP_000449089.1;Name=WP_000449089.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=CCO53_RS04045;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449089.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 80620 81921 . - . ID=gene-CCO53_RS04050;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=CCO53_RS04050;old_locus_tag=CCO53_04040 NZ_NPLZ01000002.1 Protein Homology CDS 80620 81921 . - 0 ID=cds-WP_080160055.1;Parent=gene-CCO53_RS04050;Dbxref=GenBank:WP_080160055.1;Name=WP_080160055.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=CCO53_RS04050;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_080160055.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 81911 83956 . - . ID=gene-CCO53_RS04055;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=CCO53_RS04055;old_locus_tag=CCO53_04045 NZ_NPLZ01000002.1 Protein Homology CDS 81911 83956 . - 0 ID=cds-WP_094887565.1;Parent=gene-CCO53_RS04055;Dbxref=GenBank:WP_094887565.1;Name=WP_094887565.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=CCO53_RS04055;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_094887565.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 83941 84309 . - . ID=gene-CCO53_RS04060;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=CCO53_RS04060;old_locus_tag=CCO53_04050 NZ_NPLZ01000002.1 Protein Homology CDS 83941 84309 . - 0 ID=cds-WP_000383706.1;Parent=gene-CCO53_RS04060;Dbxref=GenBank:WP_000383706.1;Name=WP_000383706.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=CCO53_RS04060;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383706.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 84367 85383 . - . ID=gene-CCO53_RS04065;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=CCO53_RS04065;old_locus_tag=CCO53_04055 NZ_NPLZ01000002.1 Protein Homology CDS 84367 85383 . - 0 ID=cds-WP_094887566.1;Parent=gene-CCO53_RS04065;Dbxref=GenBank:WP_094887566.1;Name=WP_094887566.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=CCO53_RS04065;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_094887566.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 85349 86023 . - . ID=gene-CCO53_RS04070;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=CCO53_RS04070;old_locus_tag=CCO53_04060 NZ_NPLZ01000002.1 Protein Homology CDS 85349 86023 . - 0 ID=cds-WP_023138179.1;Parent=gene-CCO53_RS04070;Dbxref=GenBank:WP_023138179.1;Name=WP_023138179.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=CCO53_RS04070;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_023138179.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 86020 86568 . - . ID=gene-CCO53_RS04075;Name=CCO53_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04075;old_locus_tag=CCO53_04065 NZ_NPLZ01000002.1 Protein Homology CDS 86020 86568 . - 0 ID=cds-WP_058331550.1;Parent=gene-CCO53_RS04075;Dbxref=GenBank:WP_058331550.1;Name=WP_058331550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=CCO53_RS04075;product=type III secretion system domain-containing protein;protein_id=WP_058331550.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 86586 87335 . - . ID=gene-CCO53_RS04080;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=CCO53_RS04080;old_locus_tag=CCO53_04070 NZ_NPLZ01000002.1 Protein Homology CDS 86586 87335 . - 0 ID=cds-WP_076726491.1;Parent=gene-CCO53_RS04080;Dbxref=GenBank:WP_076726491.1;Name=WP_076726491.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=CCO53_RS04080;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_076726491.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 87332 87580 . - . ID=gene-CCO53_RS04085;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=CCO53_RS04085;old_locus_tag=CCO53_04075 NZ_NPLZ01000002.1 Protein Homology CDS 87332 87580 . - 0 ID=cds-WP_058331551.1;Parent=gene-CCO53_RS04085;Dbxref=GenBank:WP_058331551.1;Name=WP_058331551.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctI;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=CCO53_RS04085;product=type III secretion system inner rod subunit SctI;protein_id=WP_058331551.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 87592 87882 . - . ID=gene-CCO53_RS04090;Name=CCO53_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04090;old_locus_tag=CCO53_04080 NZ_NPLZ01000002.1 Protein Homology CDS 87592 87882 . - 0 ID=cds-WP_058331528.1;Parent=gene-CCO53_RS04090;Dbxref=GenBank:WP_058331528.1;Name=WP_058331528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=CCO53_RS04090;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_058331528.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 87860 88075 . - . ID=gene-CCO53_RS04095;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=CCO53_RS04095;old_locus_tag=CCO53_04085 NZ_NPLZ01000002.1 Protein Homology CDS 87860 88075 . - 0 ID=cds-WP_000350226.1;Parent=gene-CCO53_RS04095;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=CCO53_RS04095;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 88169 88858 . - . ID=gene-CCO53_RS04100;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=CCO53_RS04100;old_locus_tag=CCO53_04090 NZ_NPLZ01000002.1 Protein Homology CDS 88169 88858 . - 0 ID=cds-WP_058331529.1;Parent=gene-CCO53_RS04100;Dbxref=GenBank:WP_058331529.1;Name=WP_058331529.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=CCO53_RS04100;product=pathogenicity island 2 effector protein SseG;protein_id=WP_058331529.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 88855 89637 . - . ID=gene-CCO53_RS04105;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=CCO53_RS04105;old_locus_tag=CCO53_04095 NZ_NPLZ01000002.1 Protein Homology CDS 88855 89637 . - 0 ID=cds-WP_058331530.1;Parent=gene-CCO53_RS04105;Dbxref=GenBank:WP_058331530.1;Name=WP_058331530.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=CCO53_RS04105;product=type III secretion systems effector SseF;protein_id=WP_058331530.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 89653 90087 . - . ID=gene-CCO53_RS04110;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=CCO53_RS04110;old_locus_tag=CCO53_04100 NZ_NPLZ01000002.1 Protein Homology CDS 89653 90087 . - 0 ID=cds-WP_058331531.1;Parent=gene-CCO53_RS04110;Dbxref=GenBank:WP_058331531.1;Name=WP_058331531.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=CCO53_RS04110;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_058331531.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 90139 90555 . - . ID=gene-CCO53_RS04115;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=CCO53_RS04115;old_locus_tag=CCO53_04105 NZ_NPLZ01000002.1 Protein Homology CDS 90139 90555 . - 0 ID=cds-WP_058331532.1;Parent=gene-CCO53_RS04115;Dbxref=GenBank:WP_058331532.1;Name=WP_058331532.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=CCO53_RS04115;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_058331532.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 90558 91145 . - . ID=gene-CCO53_RS04120;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=CCO53_RS04120;old_locus_tag=CCO53_04110 NZ_NPLZ01000002.1 Protein Homology CDS 90558 91145 . - 0 ID=cds-WP_094887567.1;Parent=gene-CCO53_RS04120;Dbxref=GenBank:WP_094887567.1;Name=WP_094887567.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=CCO53_RS04120;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_094887567.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 91161 92615 . - . ID=gene-CCO53_RS04125;Name=CCO53_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04125;old_locus_tag=CCO53_04115 NZ_NPLZ01000002.1 Protein Homology CDS 91161 92615 . - 0 ID=cds-WP_076726490.1;Parent=gene-CCO53_RS04125;Dbxref=GenBank:WP_076726490.1;Name=WP_076726490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=CCO53_RS04125;product=type III secretion system translocon protein;protein_id=WP_076726490.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 92618 93091 . - . ID=gene-CCO53_RS04130;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=CCO53_RS04130;old_locus_tag=CCO53_04120 NZ_NPLZ01000002.1 Protein Homology CDS 92618 93091 . - 0 ID=cds-WP_058331534.1;Parent=gene-CCO53_RS04130;Dbxref=GenBank:WP_058331534.1;Name=WP_058331534.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=CCO53_RS04130;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_058331534.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 93088 93678 . - . ID=gene-CCO53_RS04135;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO53_RS04135;old_locus_tag=CCO53_04125 NZ_NPLZ01000002.1 Protein Homology CDS 93088 93678 . - 0 ID=cds-WP_058331535.1;Parent=gene-CCO53_RS04135;Dbxref=GenBank:WP_058331535.1;Name=WP_058331535.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=CCO53_RS04135;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_058331535.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 93685 94011 . - . ID=gene-CCO53_RS04140;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO53_RS04140;old_locus_tag=CCO53_04130 NZ_NPLZ01000002.1 Protein Homology CDS 93685 94011 . - 0 ID=cds-WP_058331536.1;Parent=gene-CCO53_RS04140;Dbxref=GenBank:WP_058331536.1;Name=WP_058331536.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=CCO53_RS04140;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_058331536.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 94270 94512 . - . ID=gene-CCO53_RS04145;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=CCO53_RS04145;old_locus_tag=CCO53_04135 NZ_NPLZ01000002.1 Protein Homology CDS 94270 94512 . - 0 ID=cds-WP_058331537.1;Parent=gene-CCO53_RS04145;Dbxref=GenBank:WP_058331537.1;Name=WP_058331537.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=CCO53_RS04145;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_058331537.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 94520 95731 . - . ID=gene-CCO53_RS04150;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=CCO53_RS04150;old_locus_tag=CCO53_04140 NZ_NPLZ01000002.1 Protein Homology CDS 94520 95731 . - 0 ID=cds-WP_058331538.1;Parent=gene-CCO53_RS04150;Dbxref=GenBank:WP_058331538.1;Name=WP_058331538.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=CCO53_RS04150;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_058331538.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 95712 97205 . - . ID=gene-CCO53_RS04155;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=CCO53_RS04155;old_locus_tag=CCO53_04145 NZ_NPLZ01000002.1 Protein Homology CDS 95712 97205 . - 0 ID=cds-WP_058331539.1;Parent=gene-CCO53_RS04155;Dbxref=GenBank:WP_058331539.1;Name=WP_058331539.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=CCO53_RS04155;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_058331539.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 97207 97608 . - . ID=gene-CCO53_RS04160;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=CCO53_RS04160;old_locus_tag=CCO53_04150 NZ_NPLZ01000002.1 Protein Homology CDS 97207 97608 . - 0 ID=cds-WP_078057657.1;Parent=gene-CCO53_RS04160;Dbxref=GenBank:WP_078057657.1;Name=WP_078057657.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=CCO53_RS04160;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_078057657.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 98009 100771 . + . ID=gene-CCO53_RS04165;Name=CCO53_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04165;old_locus_tag=CCO53_04155 NZ_NPLZ01000002.1 Protein Homology CDS 98009 100771 . + 0 ID=cds-WP_076726485.1;Parent=gene-CCO53_RS04165;Dbxref=GenBank:WP_076726485.1;Name=WP_076726485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=CCO53_RS04165;product=two component system sensor kinase;protein_id=WP_076726485.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 100802 101440 . + . ID=gene-CCO53_RS04170;Name=CCO53_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04170;old_locus_tag=CCO53_04160 NZ_NPLZ01000002.1 Protein Homology CDS 100802 101440 . + 0 ID=cds-WP_000666335.1;Parent=gene-CCO53_RS04170;Dbxref=GenBank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=CCO53_RS04170;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 101619 102347 . + . ID=gene-CCO53_RS04175;Name=CCO53_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04175;old_locus_tag=CCO53_04165 NZ_NPLZ01000002.1 Protein Homology CDS 101619 102347 . + 0 ID=cds-WP_000122321.1;Parent=gene-CCO53_RS04175;Dbxref=GenBank:WP_000122321.1;Name=WP_000122321.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=CCO53_RS04175;product=MerR family transcriptional regulator;protein_id=WP_000122321.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 102519 103478 . + . ID=gene-CCO53_RS04180;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=CCO53_RS04180;old_locus_tag=CCO53_04170 NZ_NPLZ01000002.1 Protein Homology CDS 102519 103478 . + 0 ID=cds-WP_058331540.1;Parent=gene-CCO53_RS04180;Dbxref=GenBank:WP_058331540.1;Name=WP_058331540.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=CCO53_RS04180;product=transcriptional regulator MlrB;protein_id=WP_058331540.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 103574 103786 . - . ID=gene-CCO53_RS04185;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=CCO53_RS04185;old_locus_tag=CCO53_04175 NZ_NPLZ01000002.1 Protein Homology CDS 103574 103786 . - 0 ID=cds-WP_000165779.1;Parent=gene-CCO53_RS04185;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=CCO53_RS04185;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 103884 104504 . - . ID=gene-CCO53_RS04190;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=CCO53_RS04190;old_locus_tag=CCO53_04180 NZ_NPLZ01000002.1 Protein Homology CDS 103884 104504 . - 0 ID=cds-WP_000190927.1;Parent=gene-CCO53_RS04190;Dbxref=GenBank:WP_000190927.1;Name=WP_000190927.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=CCO53_RS04190;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190927.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 104479 106257 . - . ID=gene-CCO53_RS04195;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=CCO53_RS04195;old_locus_tag=CCO53_04185 NZ_NPLZ01000002.1 Protein Homology CDS 104479 106257 . - 0 ID=cds-WP_077917359.1;Parent=gene-CCO53_RS04195;Dbxref=GenBank:WP_077917359.1;Name=WP_077917359.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=CCO53_RS04195;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_077917359.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 106439 107173 . + . ID=gene-CCO53_RS04200;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=CCO53_RS04200;old_locus_tag=CCO53_04190 NZ_NPLZ01000002.1 Protein Homology CDS 106439 107173 . + 0 ID=cds-WP_001527654.1;Parent=gene-CCO53_RS04200;Dbxref=GenBank:WP_001527654.1;Name=WP_001527654.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=CCO53_RS04200;product=tetrathionate reductase subunit TtrB;protein_id=WP_001527654.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 107174 108196 . + . ID=gene-CCO53_RS04205;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=CCO53_RS04205;old_locus_tag=CCO53_04195 NZ_NPLZ01000002.1 Protein Homology CDS 107174 108196 . + 0 ID=cds-WP_094887568.1;Parent=gene-CCO53_RS04205;Dbxref=GenBank:WP_094887568.1;Name=WP_094887568.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=CCO53_RS04205;product=tetrathionate reductase subunit TtrC;protein_id=WP_094887568.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 108189 111251 . + . ID=gene-CCO53_RS04210;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=CCO53_RS04210;old_locus_tag=CCO53_04200 NZ_NPLZ01000002.1 Protein Homology CDS 108189 111251 . + 0 ID=cds-WP_094887569.1;Parent=gene-CCO53_RS04210;Dbxref=GenBank:WP_094887569.1;Name=WP_094887569.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=CCO53_RS04210;product=tetrathionate reductase subunit TtrA;protein_id=WP_094887569.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 111574 112800 . + . ID=gene-CCO53_RS04215;Name=CCO53_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04215;old_locus_tag=CCO53_04205 NZ_NPLZ01000002.1 Protein Homology CDS 111574 112800 . + 0 ID=cds-WP_000471822.1;Parent=gene-CCO53_RS04215;Dbxref=GenBank:WP_000471822.1;Name=WP_000471822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=CCO53_RS04215;product=PfkB family carbohydrate kinase;protein_id=WP_000471822.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 112812 113549 . + . ID=gene-CCO53_RS04220;Name=CCO53_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04220;old_locus_tag=CCO53_04210 NZ_NPLZ01000002.1 Protein Homology CDS 112812 113549 . + 0 ID=cds-WP_058331541.1;Parent=gene-CCO53_RS04220;Dbxref=GenBank:WP_058331541.1;Name=WP_058331541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=CCO53_RS04220;product=glutamine amidotransferase;protein_id=WP_058331541.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 113608 114501 . + . ID=gene-CCO53_RS04225;Name=CCO53_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04225;old_locus_tag=CCO53_04215 NZ_NPLZ01000002.1 Protein Homology CDS 113608 114501 . + 0 ID=cds-WP_058331542.1;Parent=gene-CCO53_RS04225;Dbxref=GenBank:WP_058331542.1;Name=WP_058331542.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=CCO53_RS04225;product=proline iminopeptidase-family hydrolase;protein_id=WP_058331542.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 114523 115866 . + . ID=gene-CCO53_RS04230;Name=CCO53_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04230;old_locus_tag=CCO53_04220 NZ_NPLZ01000002.1 Protein Homology CDS 114523 115866 . + 0 ID=cds-WP_023211257.1;Parent=gene-CCO53_RS04230;Dbxref=GenBank:WP_023211257.1;Name=WP_023211257.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=CCO53_RS04230;product=APC family permease;protein_id=WP_023211257.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 116030 116260 . + . ID=gene-CCO53_RS24315;Name=CCO53_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24315 NZ_NPLZ01000002.1 Protein Homology CDS 116030 116260 . + 0 ID=cds-WP_418143684.1;Parent=gene-CCO53_RS24315;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=CCO53_RS24315;product=hypothetical protein;protein_id=WP_418143684.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 116268 117680 . + . ID=gene-CCO53_RS04240;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=CCO53_RS04240;old_locus_tag=CCO53_04230 NZ_NPLZ01000002.1 Protein Homology CDS 116268 117680 . + 0 ID=cds-WP_000751447.1;Parent=gene-CCO53_RS04240;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=CCO53_RS04240;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 117991 118227 . + . ID=gene-CCO53_RS04245;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=CCO53_RS04245;old_locus_tag=CCO53_04235 NZ_NPLZ01000002.1 Protein Homology CDS 117991 118227 . + 0 ID=cds-WP_001082307.1;Parent=gene-CCO53_RS04245;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=CCO53_RS04245;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 118310 118549 . + . ID=gene-CCO53_RS04250;Name=CCO53_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04250;old_locus_tag=CCO53_04240 NZ_NPLZ01000002.1 Protein Homology CDS 118310 118549 . + 0 ID=cds-WP_001727727.1;Parent=gene-CCO53_RS04250;Dbxref=GenBank:WP_001727727.1;Name=WP_001727727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=CCO53_RS04250;product=major outer membrane lipoprotein;protein_id=WP_001727727.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 118616 119617 . - . ID=gene-CCO53_RS04255;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=CCO53_RS04255;old_locus_tag=CCO53_04245 NZ_NPLZ01000002.1 Protein Homology CDS 118616 119617 . - 0 ID=cds-WP_094887570.1;Parent=gene-CCO53_RS04255;Dbxref=GenBank:WP_094887570.1;Name=WP_094887570.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=CCO53_RS04255;product=L%2CD-transpeptidase LdtE;protein_id=WP_094887570.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 119772 120188 . - . ID=gene-CCO53_RS04260;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=CCO53_RS04260;old_locus_tag=CCO53_04250 NZ_NPLZ01000002.1 Protein Homology CDS 119772 120188 . - 0 ID=cds-WP_000729470.1;Parent=gene-CCO53_RS04260;Dbxref=GenBank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=CCO53_RS04260;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 120201 121421 . - . ID=gene-CCO53_RS04265;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=CCO53_RS04265;old_locus_tag=CCO53_04255 NZ_NPLZ01000002.1 Protein Homology CDS 120201 121421 . - 0 ID=cds-WP_000143859.1;Parent=gene-CCO53_RS04265;Dbxref=GenBank:WP_000143859.1;Name=WP_000143859.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=CCO53_RS04265;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 121418 122689 . - . ID=gene-CCO53_RS04270;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CCO53_RS04270;old_locus_tag=CCO53_04260 NZ_NPLZ01000002.1 Protein Homology CDS 121418 122689 . - 0 ID=cds-WP_000907932.1;Parent=gene-CCO53_RS04270;Dbxref=GenBank:WP_000907932.1;Name=WP_000907932.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=CCO53_RS04270;product=Fe-S cluster assembly protein SufD;protein_id=WP_000907932.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 122664 123410 . - . ID=gene-CCO53_RS04275;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CCO53_RS04275;old_locus_tag=CCO53_04265 NZ_NPLZ01000002.1 Protein Homology CDS 122664 123410 . - 0 ID=cds-WP_000948902.1;Parent=gene-CCO53_RS04275;Dbxref=GenBank:WP_000948902.1;Name=WP_000948902.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=CCO53_RS04275;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948902.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 123427 124914 . - . ID=gene-CCO53_RS04280;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CCO53_RS04280;old_locus_tag=CCO53_04270 NZ_NPLZ01000002.1 Protein Homology CDS 123427 124914 . - 0 ID=cds-WP_000089375.1;Parent=gene-CCO53_RS04280;Dbxref=GenBank:WP_000089375.1;Name=WP_000089375.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=CCO53_RS04280;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089375.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 124923 125291 . - . ID=gene-CCO53_RS04285;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=CCO53_RS04285;old_locus_tag=CCO53_04275 NZ_NPLZ01000002.1 Protein Homology CDS 124923 125291 . - 0 ID=cds-WP_000418973.1;Parent=gene-CCO53_RS04285;Dbxref=GenBank:WP_000418973.1;Name=WP_000418973.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=CCO53_RS04285;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418973.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 125718 127064 . + . ID=gene-CCO53_RS04290;Name=CCO53_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04290;old_locus_tag=CCO53_04280 NZ_NPLZ01000002.1 Protein Homology CDS 125718 127064 . + 0 ID=cds-WP_000261861.1;Parent=gene-CCO53_RS04290;Dbxref=GenBank:WP_000261861.1;Name=WP_000261861.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=CCO53_RS04290;product=L-cystine transporter;protein_id=WP_000261861.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 127352 127540 . - . ID=gene-CCO53_RS04295;Name=CCO53_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04295;old_locus_tag=CCO53_04285 NZ_NPLZ01000002.1 Protein Homology CDS 127352 127540 . - 0 ID=cds-WP_001537749.1;Parent=gene-CCO53_RS04295;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=CCO53_RS04295;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 127639 128049 . - . ID=gene-CCO53_RS04300;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CCO53_RS04300;old_locus_tag=CCO53_04290 NZ_NPLZ01000002.1 Protein Homology CDS 127639 128049 . - 0 ID=cds-WP_000637926.1;Parent=gene-CCO53_RS04300;Dbxref=GenBank:WP_000637926.1;Name=WP_000637926.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=CCO53_RS04300;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637926.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 128046 131102 . - . ID=gene-CCO53_RS04305;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=CCO53_RS04305;old_locus_tag=CCO53_04295 NZ_NPLZ01000002.1 Protein Homology CDS 128046 131102 . - 0 ID=cds-WP_058331545.1;Parent=gene-CCO53_RS04305;Dbxref=GenBank:WP_058331545.1;Name=WP_058331545.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=CCO53_RS04305;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_058331545.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 131367 132485 . + . ID=gene-CCO53_RS04310;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=CCO53_RS04310;old_locus_tag=CCO53_04300 NZ_NPLZ01000002.1 Protein Homology CDS 131367 132485 . + 0 ID=cds-WP_000248613.1;Parent=gene-CCO53_RS04310;Dbxref=GenBank:WP_000248613.1;Name=WP_000248613.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=CCO53_RS04310;product=AI-2E family transporter YdiK;protein_id=WP_000248613.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 132668 132775 . + . ID=gene-CCO53_RS04315;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=CCO53_RS04315;old_locus_tag=CCO53_04305 NZ_NPLZ01000002.1 cmsearch antisense_RNA 132668 132775 . + . ID=rna-CCO53_RS04315;Parent=gene-CCO53_RS04315;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS04315;product=antisense sRNA RprA NZ_NPLZ01000002.1 cmsearch exon 132668 132775 . + . ID=exon-CCO53_RS04315-1;Parent=rna-CCO53_RS04315;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS04315;product=antisense sRNA RprA NZ_NPLZ01000002.1 RefSeq gene 132943 133302 . + . ID=gene-CCO53_RS04320;Name=CCO53_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04320;old_locus_tag=CCO53_04310 NZ_NPLZ01000002.1 Protein Homology CDS 132943 133302 . + 0 ID=cds-WP_000980451.1;Parent=gene-CCO53_RS04320;Dbxref=GenBank:WP_000980451.1;Name=WP_000980451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=CCO53_RS04320;product=YdiL family protein;protein_id=WP_000980451.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 133443 134654 . + . ID=gene-CCO53_RS04325;Name=CCO53_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04325;old_locus_tag=CCO53_04315 NZ_NPLZ01000002.1 Protein Homology CDS 133443 134654 . + 0 ID=cds-WP_058331546.1;Parent=gene-CCO53_RS04325;Dbxref=GenBank:WP_058331546.1;Name=WP_058331546.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=CCO53_RS04325;product=MFS transporter;protein_id=WP_058331546.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 135018 136253 . + . ID=gene-CCO53_RS04330;Name=CCO53_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04330;old_locus_tag=CCO53_04320 NZ_NPLZ01000002.1 Protein Homology CDS 135018 136253 . + 0 ID=cds-WP_000081211.1;Parent=gene-CCO53_RS04330;Dbxref=GenBank:WP_000081211.1;Name=WP_000081211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=CCO53_RS04330;product=MFS transporter;protein_id=WP_000081211.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 136320 137186 . + . ID=gene-CCO53_RS04335;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=CCO53_RS04335;old_locus_tag=CCO53_04325 NZ_NPLZ01000002.1 Protein Homology CDS 136320 137186 . + 0 ID=cds-WP_000383488.1;Parent=gene-CCO53_RS04335;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=CCO53_RS04335;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 137231 137989 . + . ID=gene-CCO53_RS04340;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CCO53_RS04340;old_locus_tag=CCO53_04330 NZ_NPLZ01000002.1 Protein Homology CDS 137231 137989 . + 0 ID=cds-WP_000860221.1;Parent=gene-CCO53_RS04340;Dbxref=GenBank:WP_000860221.1;Name=WP_000860221.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=CCO53_RS04340;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860221.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 138143 139738 . + . ID=gene-CCO53_RS04345;Name=CCO53_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04345;old_locus_tag=CCO53_04335 NZ_NPLZ01000002.1 Protein Homology CDS 138143 139738 . + 0 ID=cds-WP_000700599.1;Parent=gene-CCO53_RS04345;Dbxref=GenBank:WP_000700599.1;Name=WP_000700599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=CCO53_RS04345;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000700599.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 139752 140903 . + . ID=gene-CCO53_RS04350;Name=CCO53_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04350;old_locus_tag=CCO53_04340 NZ_NPLZ01000002.1 Protein Homology CDS 139752 140903 . + 0 ID=cds-WP_000347819.1;Parent=gene-CCO53_RS04350;Dbxref=GenBank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=CCO53_RS04350;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 140979 141869 . - . ID=gene-CCO53_RS04355;Name=CCO53_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04355;old_locus_tag=CCO53_04345 NZ_NPLZ01000002.1 Protein Homology CDS 140979 141869 . - 0 ID=cds-WP_000284832.1;Parent=gene-CCO53_RS04355;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=CCO53_RS04355;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 142332 143096 . + . ID=gene-CCO53_RS04360;Name=CCO53_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04360;old_locus_tag=CCO53_04350 NZ_NPLZ01000002.1 Protein Homology CDS 142332 143096 . + 0 ID=cds-WP_024798030.1;Parent=gene-CCO53_RS04360;Dbxref=GenBank:WP_024798030.1;Name=WP_024798030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=CCO53_RS04360;product=electron transfer flavoprotein;protein_id=WP_024798030.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 143118 144053 . + . ID=gene-CCO53_RS04365;Name=CCO53_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04365;old_locus_tag=CCO53_04355 NZ_NPLZ01000002.1 Protein Homology CDS 143118 144053 . + 0 ID=cds-WP_001015880.1;Parent=gene-CCO53_RS04365;Dbxref=GenBank:WP_001015880.1;Name=WP_001015880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=CCO53_RS04365;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015880.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 144110 145396 . + . ID=gene-CCO53_RS04370;Name=CCO53_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04370;old_locus_tag=CCO53_04360 NZ_NPLZ01000002.1 Protein Homology CDS 144110 145396 . + 0 ID=cds-WP_001278555.1;Parent=gene-CCO53_RS04370;Dbxref=GenBank:WP_001278555.1;Name=WP_001278555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=CCO53_RS04370;product=FAD-dependent oxidoreductase;protein_id=WP_001278555.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 145393 145686 . + . ID=gene-CCO53_RS04375;Name=CCO53_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04375;old_locus_tag=CCO53_04365 NZ_NPLZ01000002.1 Protein Homology CDS 145393 145686 . + 0 ID=cds-WP_000093362.1;Parent=gene-CCO53_RS04375;Dbxref=GenBank:WP_000093362.1;Name=WP_000093362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=CCO53_RS04375;product=ferredoxin family protein;protein_id=WP_000093362.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 145775 147415 . + . ID=gene-CCO53_RS04380;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=CCO53_RS04380;old_locus_tag=CCO53_04370 NZ_NPLZ01000002.1 Protein Homology CDS 145775 147415 . + 0 ID=cds-WP_000117490.1;Parent=gene-CCO53_RS04380;Dbxref=GenBank:WP_000117490.1;Name=WP_000117490.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=CCO53_RS04380;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_000117490.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 147457 149835 . - . ID=gene-CCO53_RS04385;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=CCO53_RS04385;old_locus_tag=CCO53_04375 NZ_NPLZ01000002.1 Protein Homology CDS 147457 149835 . - 0 ID=cds-WP_080160034.1;Parent=gene-CCO53_RS04385;Dbxref=GenBank:WP_080160034.1;Name=WP_080160034.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=CCO53_RS04385;product=phosphoenolpyruvate synthase;protein_id=WP_080160034.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 150172 151005 . + . ID=gene-CCO53_RS04390;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=CCO53_RS04390;old_locus_tag=CCO53_04380 NZ_NPLZ01000002.1 Protein Homology CDS 150172 151005 . + 0 ID=cds-WP_000370992.1;Parent=gene-CCO53_RS04390;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=CCO53_RS04390;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 151161 152207 . + . ID=gene-CCO53_RS04395;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=CCO53_RS04395;old_locus_tag=CCO53_04385 NZ_NPLZ01000002.1 Protein Homology CDS 151161 152207 . + 0 ID=cds-WP_001082196.1;Parent=gene-CCO53_RS04395;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=CCO53_RS04395;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 152364 152555 . + . ID=gene-CCO53_RS04400;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=CCO53_RS04400;old_locus_tag=CCO53_04390 NZ_NPLZ01000002.1 Protein Homology CDS 152364 152555 . + 0 ID=cds-WP_000089118.1;Parent=gene-CCO53_RS04400;Dbxref=GenBank:WP_000089118.1;Name=WP_000089118.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=CCO53_RS04400;product=hemin uptake protein HemP;protein_id=WP_000089118.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 152590 154032 . - . ID=gene-CCO53_RS04405;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=CCO53_RS04405;old_locus_tag=CCO53_04395 NZ_NPLZ01000002.1 Protein Homology CDS 152590 154032 . - 0 ID=cds-WP_000175660.1;Parent=gene-CCO53_RS04405;Dbxref=GenBank:WP_000175660.1;Name=WP_000175660.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=CCO53_RS04405;product=protein adenylyltransferase SelO;protein_id=WP_000175660.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 154094 154807 . - . ID=gene-CCO53_RS04410;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=CCO53_RS04410;old_locus_tag=CCO53_04400 NZ_NPLZ01000002.1 Protein Homology CDS 154094 154807 . - 0 ID=cds-WP_000562006.1;Parent=gene-CCO53_RS04410;Dbxref=GenBank:WP_000562006.1;Name=WP_000562006.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=CCO53_RS04410;product=anti-FlhDC factor YdiV;protein_id=WP_000562006.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 155121 155585 . - . ID=gene-CCO53_RS04415;Name=CCO53_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04415;old_locus_tag=CCO53_04405 NZ_NPLZ01000002.1 Protein Homology CDS 155121 155585 . - 0 ID=cds-WP_001213258.1;Parent=gene-CCO53_RS04415;Dbxref=GenBank:WP_001213258.1;Name=WP_001213258.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=CCO53_RS04415;product=C40 family peptidase;protein_id=WP_001213258.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 155662 156411 . - . ID=gene-CCO53_RS04420;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=CCO53_RS04420;old_locus_tag=CCO53_04410 NZ_NPLZ01000002.1 Protein Homology CDS 155662 156411 . - 0 ID=cds-WP_000080607.1;Parent=gene-CCO53_RS04420;Dbxref=GenBank:WP_000080607.1;Name=WP_000080607.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=CCO53_RS04420;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080607.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 156411 156962 . - . ID=gene-CCO53_RS04425;Name=CCO53_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04425;old_locus_tag=CCO53_04415 NZ_NPLZ01000002.1 Protein Homology CDS 156411 156962 . - 0 ID=cds-WP_001181565.1;Parent=gene-CCO53_RS04425;Dbxref=GenBank:WP_001181565.1;Name=WP_001181565.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=CCO53_RS04425;product=glutathione peroxidase;protein_id=WP_001181565.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 157054 158034 . - . ID=gene-CCO53_RS04430;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=CCO53_RS04430;old_locus_tag=CCO53_04420 NZ_NPLZ01000002.1 Protein Homology CDS 157054 158034 . - 0 ID=cds-WP_000954984.1;Parent=gene-CCO53_RS04430;Dbxref=GenBank:WP_000954984.1;Name=WP_000954984.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=CCO53_RS04430;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954984.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 158237 158536 . - . ID=gene-CCO53_RS04435;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=CCO53_RS04435;old_locus_tag=CCO53_04425 NZ_NPLZ01000002.1 Protein Homology CDS 158237 158536 . - 0 ID=cds-WP_001229266.1;Parent=gene-CCO53_RS04435;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=CCO53_RS04435;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 158541 160928 . - . ID=gene-CCO53_RS04440;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CCO53_RS04440;old_locus_tag=CCO53_04430 NZ_NPLZ01000002.1 Protein Homology CDS 158541 160928 . - 0 ID=cds-WP_000672402.1;Parent=gene-CCO53_RS04440;Dbxref=GenBank:WP_000672402.1;Name=WP_000672402.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=CCO53_RS04440;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672402.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 160944 161927 . - . ID=gene-CCO53_RS04445;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CCO53_RS04445;old_locus_tag=CCO53_04435 NZ_NPLZ01000002.1 Protein Homology CDS 160944 161927 . - 0 ID=cds-WP_000018570.1;Parent=gene-CCO53_RS04445;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=CCO53_RS04445;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11 NZ_NPLZ01000002.1 cmsearch sequence_feature 161990 162113 . - . ID=id-NZ_NPLZ01000002.1:161990..162113;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPLZ01000002.1 RefSeq gene 162064 162108 . - . ID=gene-CCO53_RS23615;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=CCO53_RS23615 NZ_NPLZ01000002.1 Protein Homology CDS 162064 162108 . - 0 ID=cds-WP_001386830.1;Parent=gene-CCO53_RS23615;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=CCO53_RS23615;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 162229 162585 . - . ID=gene-CCO53_RS04450;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CCO53_RS04450;old_locus_tag=CCO53_04440 NZ_NPLZ01000002.1 Protein Homology CDS 162229 162585 . - 0 ID=cds-WP_000124850.1;Parent=gene-CCO53_RS04450;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=CCO53_RS04450;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 162636 162833 . - . ID=gene-CCO53_RS04455;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CCO53_RS04455;old_locus_tag=CCO53_04445 NZ_NPLZ01000002.1 Protein Homology CDS 162636 162833 . - 0 ID=cds-WP_001124225.1;Parent=gene-CCO53_RS04455;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=CCO53_RS04455;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 162929 163471 . - . ID=gene-CCO53_RS04460;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CCO53_RS04460;old_locus_tag=CCO53_04450 NZ_NPLZ01000002.1 Protein Homology CDS 162929 163471 . - 0 ID=cds-WP_001574431.1;Parent=gene-CCO53_RS04460;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=CCO53_RS04460;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 163475 165403 . - . ID=gene-CCO53_RS04465;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CCO53_RS04465;old_locus_tag=CCO53_04455 NZ_NPLZ01000002.1 Protein Homology CDS 163475 165403 . - 0 ID=cds-WP_001144226.1;Parent=gene-CCO53_RS04465;Dbxref=GenBank:WP_001144226.1;Name=WP_001144226.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=CCO53_RS04465;product=threonine--tRNA ligase;protein_id=WP_001144226.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 165663 166517 . - . ID=gene-CCO53_RS04475;Name=CCO53_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04475;old_locus_tag=CCO53_04465 NZ_NPLZ01000002.1 Protein Homology CDS 165663 166517 . - 0 ID=cds-WP_001044090.1;Parent=gene-CCO53_RS04475;Dbxref=GenBank:WP_001044090.1;Name=WP_001044090.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=CCO53_RS04475;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044090.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 166514 166828 . - . ID=gene-CCO53_RS04480;Name=CCO53_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04480;old_locus_tag=CCO53_04470 NZ_NPLZ01000002.1 Protein Homology CDS 166514 166828 . - 0 ID=cds-WP_023972210.1;Parent=gene-CCO53_RS04480;Dbxref=GenBank:WP_023972210.1;Name=WP_023972210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=CCO53_RS04480;product=hypothetical protein;protein_id=WP_023972210.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 166971 167930 . + . ID=gene-CCO53_RS04485;Name=CCO53_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04485;old_locus_tag=CCO53_04475 NZ_NPLZ01000002.1 Protein Homology CDS 166971 167930 . + 0 ID=cds-WP_001046434.1;Parent=gene-CCO53_RS04485;Dbxref=GenBank:WP_001046434.1;Name=WP_001046434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=CCO53_RS04485;product=lipid A deacylase LpxR family protein;protein_id=WP_001046434.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 167979 168737 . - . ID=gene-CCO53_RS04490;Name=CCO53_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04490;old_locus_tag=CCO53_04480 NZ_NPLZ01000002.1 Protein Homology CDS 167979 168737 . - 0 ID=cds-WP_000770981.1;Parent=gene-CCO53_RS04490;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=CCO53_RS04490;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 169026 169958 . + . ID=gene-CCO53_RS04495;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO53_RS04495;old_locus_tag=CCO53_04485 NZ_NPLZ01000002.1 Protein Homology CDS 169026 169958 . + 0 ID=cds-WP_000251707.1;Parent=gene-CCO53_RS04495;Dbxref=GenBank:WP_000251707.1;Name=WP_000251707.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=CCO53_RS04495;product=6-phosphofructokinase II;protein_id=WP_000251707.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 170055 170345 . + . ID=gene-CCO53_RS04500;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=CCO53_RS04500;old_locus_tag=CCO53_04490 NZ_NPLZ01000002.1 Protein Homology CDS 170055 170345 . + 0 ID=cds-WP_000146133.1;Parent=gene-CCO53_RS04500;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=CCO53_RS04500;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 170452 171312 . + . ID=gene-CCO53_RS04505;Name=CCO53_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04505;old_locus_tag=CCO53_04495 NZ_NPLZ01000002.1 Protein Homology CDS 170452 171312 . + 0 ID=cds-WP_000267686.1;Parent=gene-CCO53_RS04505;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=CCO53_RS04505;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 171355 171891 . - . ID=gene-CCO53_RS04510;Name=CCO53_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04510;old_locus_tag=CCO53_04500 NZ_NPLZ01000002.1 Protein Homology CDS 171355 171891 . - 0 ID=cds-WP_000222158.1;Parent=gene-CCO53_RS04510;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=CCO53_RS04510;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 172040 172708 . + . ID=gene-CCO53_RS04515;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=CCO53_RS04515;old_locus_tag=CCO53_04505 NZ_NPLZ01000002.1 Protein Homology CDS 172040 172708 . + 0 ID=cds-WP_000106854.1;Parent=gene-CCO53_RS04515;Dbxref=GenBank:WP_000106854.1;Name=WP_000106854.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=CCO53_RS04515;product=hexitol phosphatase HxpB;protein_id=WP_000106854.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 172846 173445 . + . ID=gene-CCO53_RS04520;Name=CCO53_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04520;old_locus_tag=CCO53_04510 NZ_NPLZ01000002.1 Protein Homology CDS 172846 173445 . + 0 ID=cds-WP_000505804.1;Parent=gene-CCO53_RS04520;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=CCO53_RS04520;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 173582 174973 . + . ID=gene-CCO53_RS04525;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=CCO53_RS04525;old_locus_tag=CCO53_04515 NZ_NPLZ01000002.1 Protein Homology CDS 173582 174973 . + 0 ID=cds-WP_001010654.1;Parent=gene-CCO53_RS04525;Dbxref=GenBank:WP_001010654.1;Name=WP_001010654.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=CCO53_RS04525;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010654.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 175076 175318 . - . ID=gene-CCO53_RS04530;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=CCO53_RS04530;old_locus_tag=CCO53_04520 NZ_NPLZ01000002.1 Protein Homology CDS 175076 175318 . - 0 ID=cds-WP_000977510.1;Parent=gene-CCO53_RS04530;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=CCO53_RS04530;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 175535 177787 . + . ID=gene-CCO53_RS04535;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=CCO53_RS04535;old_locus_tag=CCO53_04525 NZ_NPLZ01000002.1 Protein Homology CDS 175535 177787 . + 0 ID=cds-WP_094887571.1;Parent=gene-CCO53_RS04535;Dbxref=GenBank:WP_094887571.1;Name=WP_094887571.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=CCO53_RS04535;product=catalase HPII;protein_id=WP_094887571.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 177831 178589 . - . ID=gene-CCO53_RS04540;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=CCO53_RS04540;old_locus_tag=CCO53_04530 NZ_NPLZ01000002.1 Protein Homology CDS 177831 178589 . - 0 ID=cds-WP_094887572.1;Parent=gene-CCO53_RS04540;Dbxref=GenBank:WP_094887572.1;Name=WP_094887572.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=CCO53_RS04540;product=chitin disaccharide deacetylase;protein_id=WP_094887572.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 178602 179957 . - . ID=gene-CCO53_RS04545;Name=CCO53_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04545;old_locus_tag=CCO53_04535 NZ_NPLZ01000002.1 Protein Homology CDS 178602 179957 . - 0 ID=cds-WP_000078778.1;Parent=gene-CCO53_RS04545;Dbxref=GenBank:WP_000078778.1;Name=WP_000078778.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=CCO53_RS04545;product=6-phospho-beta-glucosidase;protein_id=WP_000078778.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 180082 180924 . - . ID=gene-CCO53_RS04550;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=CCO53_RS04550;old_locus_tag=CCO53_04540 NZ_NPLZ01000002.1 Protein Homology CDS 180082 180924 . - 0 ID=cds-WP_000983393.1;Parent=gene-CCO53_RS04550;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=CCO53_RS04550;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 180935 181282 . - . ID=gene-CCO53_RS04555;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=CCO53_RS04555;old_locus_tag=CCO53_04545 NZ_NPLZ01000002.1 Protein Homology CDS 180935 181282 . - 0 ID=cds-WP_000459883.1;Parent=gene-CCO53_RS04555;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=CCO53_RS04555;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 181333 182691 . - . ID=gene-CCO53_RS04560;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=CCO53_RS04560;old_locus_tag=CCO53_04550 NZ_NPLZ01000002.1 Protein Homology CDS 181333 182691 . - 0 ID=cds-WP_000073063.1;Parent=gene-CCO53_RS04560;Dbxref=GenBank:WP_000073063.1;Name=WP_000073063.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=CCO53_RS04560;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073063.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 182774 183094 . - . ID=gene-CCO53_RS04565;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=CCO53_RS04565;old_locus_tag=CCO53_04555 NZ_NPLZ01000002.1 Protein Homology CDS 182774 183094 . - 0 ID=cds-WP_000412161.1;Parent=gene-CCO53_RS04565;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=CCO53_RS04565;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 183395 183736 . - . ID=gene-CCO53_RS04575;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=CCO53_RS04575;old_locus_tag=CCO53_04565 NZ_NPLZ01000002.1 Protein Homology CDS 183395 183736 . - 0 ID=cds-WP_001039301.1;Parent=gene-CCO53_RS04575;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=CCO53_RS04575;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 183955 184782 . + . ID=gene-CCO53_RS04580;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CCO53_RS04580;old_locus_tag=CCO53_04570 NZ_NPLZ01000002.1 Protein Homology CDS 183955 184782 . + 0 ID=cds-WP_023202071.1;Parent=gene-CCO53_RS04580;Dbxref=GenBank:WP_023202071.1;Name=WP_023202071.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=CCO53_RS04580;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_023202071.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 184903 185784 . + . ID=gene-CCO53_RS04585;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=CCO53_RS04585;old_locus_tag=CCO53_04575 NZ_NPLZ01000002.1 Protein Homology CDS 184903 185784 . + 0 ID=cds-WP_201792738.1;Parent=gene-CCO53_RS04585;Dbxref=GenBank:WP_201792738.1;Name=WP_201792738.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=CCO53_RS04585;product=excinuclease Cho;protein_id=WP_201792738.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 185859 186344 . - . ID=gene-CCO53_RS04590;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=CCO53_RS04590;old_locus_tag=CCO53_04580 NZ_NPLZ01000002.1 Protein Homology CDS 185859 186344 . - 0 ID=cds-WP_001228996.1;Parent=gene-CCO53_RS04590;Dbxref=GenBank:WP_001228996.1;Name=WP_001228996.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=CCO53_RS04590;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228996.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 186680 187648 . - . ID=gene-CCO53_RS04600;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=CCO53_RS04600;old_locus_tag=CCO53_04590 NZ_NPLZ01000002.1 Protein Homology CDS 186680 187648 . - 0 ID=cds-WP_094887574.1;Parent=gene-CCO53_RS04600;Dbxref=GenBank:WP_094887574.1;Name=WP_094887574.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=CCO53_RS04600;product=succinylglutamate desuccinylase;protein_id=WP_094887574.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 187641 188984 . - . ID=gene-CCO53_RS04605;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=CCO53_RS04605;old_locus_tag=CCO53_04595 NZ_NPLZ01000002.1 Protein Homology CDS 187641 188984 . - 0 ID=cds-WP_094887575.1;Parent=gene-CCO53_RS04605;Dbxref=GenBank:WP_094887575.1;Name=WP_094887575.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=CCO53_RS04605;product=N-succinylarginine dihydrolase;protein_id=WP_094887575.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 188981 190459 . - . ID=gene-CCO53_RS04610;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=CCO53_RS04610;old_locus_tag=CCO53_04600 NZ_NPLZ01000002.1 Protein Homology CDS 188981 190459 . - 0 ID=cds-WP_094887576.1;Parent=gene-CCO53_RS04610;Dbxref=GenBank:WP_094887576.1;Name=WP_094887576.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=CCO53_RS04610;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_094887576.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 190456 191490 . - . ID=gene-CCO53_RS04615;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=CCO53_RS04615;old_locus_tag=CCO53_04605 NZ_NPLZ01000002.1 Protein Homology CDS 190456 191490 . - 0 ID=cds-WP_023207146.1;Parent=gene-CCO53_RS04615;Dbxref=GenBank:WP_023207146.1;Name=WP_023207146.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=CCO53_RS04615;product=arginine N-succinyltransferase;protein_id=WP_023207146.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 191481 192707 . - . ID=gene-CCO53_RS04620;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=CCO53_RS04620;old_locus_tag=CCO53_04610 NZ_NPLZ01000002.1 Protein Homology CDS 191481 192707 . - 0 ID=cds-WP_094887577.1;Parent=gene-CCO53_RS04620;Dbxref=GenBank:WP_094887577.1;Name=WP_094887577.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=CCO53_RS04620;product=succinylornithine/acetylornithine transaminase;protein_id=WP_094887577.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 193153 193959 . + . ID=gene-CCO53_RS04630;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=CCO53_RS04630;old_locus_tag=CCO53_04620 NZ_NPLZ01000002.1 Protein Homology CDS 193153 193959 . + 0 ID=cds-WP_000673951.1;Parent=gene-CCO53_RS04630;Dbxref=GenBank:WP_000673951.1;Name=WP_000673951.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=CCO53_RS04630;product=exodeoxyribonuclease III;protein_id=WP_000673951.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 194032 194448 . + . ID=gene-CCO53_RS04635;Name=CCO53_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04635;old_locus_tag=CCO53_04625 NZ_NPLZ01000002.1 Protein Homology CDS 194032 194448 . + 0 ID=cds-WP_000592136.1;Parent=gene-CCO53_RS04635;Dbxref=GenBank:WP_000592136.1;Name=WP_000592136.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=CCO53_RS04635;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592136.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 194408 194683 . - . ID=gene-CCO53_RS04640;Name=CCO53_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04640;old_locus_tag=CCO53_04630 NZ_NPLZ01000002.1 Protein Homology CDS 194408 194683 . - 0 ID=cds-WP_001254682.1;Parent=gene-CCO53_RS04640;Dbxref=GenBank:WP_001254682.1;Name=WP_001254682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=CCO53_RS04640;product=YnjH family protein;protein_id=WP_001254682.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 194922 196265 . + . ID=gene-CCO53_RS04645;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=CCO53_RS04645;old_locus_tag=CCO53_04635 NZ_NPLZ01000002.1 Protein Homology CDS 194922 196265 . + 0 ID=cds-WP_000372865.1;Parent=gene-CCO53_RS04645;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=CCO53_RS04645;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 196295 198244 . - . ID=gene-CCO53_RS04650;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=CCO53_RS04650;old_locus_tag=CCO53_04640 NZ_NPLZ01000002.1 Protein Homology CDS 196295 198244 . - 0 ID=cds-WP_094887578.1;Parent=gene-CCO53_RS04650;Dbxref=GenBank:WP_094887578.1;Name=WP_094887578.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=CCO53_RS04650;product=DNA topoisomerase III;protein_id=WP_094887578.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 198249 199292 . - . ID=gene-CCO53_RS04655;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=CCO53_RS04655;old_locus_tag=CCO53_04645 NZ_NPLZ01000002.1 Protein Homology CDS 198249 199292 . - 0 ID=cds-WP_001294888.1;Parent=gene-CCO53_RS04655;Dbxref=GenBank:WP_001294888.1;Name=WP_001294888.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=CCO53_RS04655;product=selenide%2C water dikinase SelD;protein_id=WP_001294888.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 199410 199961 . - . ID=gene-CCO53_RS04665;Name=CCO53_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04665;old_locus_tag=CCO53_04655 NZ_NPLZ01000002.1 Protein Homology CDS 199410 199961 . - 0 ID=cds-WP_000339313.1;Parent=gene-CCO53_RS04665;Dbxref=GenBank:WP_000339313.1;Name=WP_000339313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=CCO53_RS04665;product=NAD(P)H nitroreductase;protein_id=WP_000339313.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 200135 201991 . + . ID=gene-CCO53_RS04675;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CCO53_RS04675;old_locus_tag=CCO53_04665 NZ_NPLZ01000002.1 Protein Homology CDS 200135 201991 . + 0 ID=cds-WP_001259884.1;Parent=gene-CCO53_RS04675;Dbxref=GenBank:WP_001259884.1;Name=WP_001259884.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=CCO53_RS04675;product=signal peptide peptidase SppA;protein_id=WP_001259884.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 202087 203103 . + . ID=gene-CCO53_RS04680;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=CCO53_RS04680;old_locus_tag=CCO53_04670 NZ_NPLZ01000002.1 Protein Homology CDS 202087 203103 . + 0 ID=cds-WP_001170134.1;Parent=gene-CCO53_RS04680;Dbxref=GenBank:WP_001170134.1;Name=WP_001170134.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=CCO53_RS04680;product=asparaginase;protein_id=WP_001170134.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 203130 203786 . + . ID=gene-CCO53_RS04685;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=CCO53_RS04685;old_locus_tag=CCO53_04675 NZ_NPLZ01000002.1 Protein Homology CDS 203130 203786 . + 0 ID=cds-WP_000184708.1;Parent=gene-CCO53_RS04685;Dbxref=GenBank:WP_000184708.1;Name=WP_000184708.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=CCO53_RS04685;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184708.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 203889 205247 . - . ID=gene-CCO53_RS04690;Name=CCO53_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04690;old_locus_tag=CCO53_04680 NZ_NPLZ01000002.1 Protein Homology CDS 203889 205247 . - 0 ID=cds-WP_000389923.1;Parent=gene-CCO53_RS04690;Dbxref=GenBank:WP_000389923.1;Name=WP_000389923.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=CCO53_RS04690;product=MFS transporter;protein_id=WP_000389923.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 205383 206141 . - . ID=gene-CCO53_RS04695;Name=CCO53_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04695;old_locus_tag=CCO53_04685 NZ_NPLZ01000002.1 Protein Homology CDS 205383 206141 . - 0 ID=cds-WP_000719104.1;Parent=gene-CCO53_RS04695;Dbxref=GenBank:WP_000719104.1;Name=WP_000719104.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=CCO53_RS04695;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000719104.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 206271 207254 . - . ID=gene-CCO53_RS04700;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=CCO53_RS04700;old_locus_tag=CCO53_04690 NZ_NPLZ01000002.1 Protein Homology CDS 206271 207254 . - 0 ID=cds-WP_000782142.1;Parent=gene-CCO53_RS04700;Dbxref=GenBank:WP_000782142.1;Name=WP_000782142.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=CCO53_RS04700;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000782142.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 207264 208211 . - . ID=gene-CCO53_RS04705;Name=CCO53_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04705;old_locus_tag=CCO53_04695 NZ_NPLZ01000002.1 Protein Homology CDS 207264 208211 . - 0 ID=cds-WP_000343332.1;Parent=gene-CCO53_RS04705;Dbxref=GenBank:WP_000343332.1;Name=WP_000343332.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=CCO53_RS04705;product=sugar kinase;protein_id=WP_000343332.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 208216 209052 . - . ID=gene-CCO53_RS04710;Name=CCO53_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04710;old_locus_tag=CCO53_04700 NZ_NPLZ01000002.1 Protein Homology CDS 208216 209052 . - 0 ID=cds-WP_000878870.1;Parent=gene-CCO53_RS04710;Dbxref=GenBank:WP_000878870.1;Name=WP_000878870.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=CCO53_RS04710;product=ketose-bisphosphate aldolase;protein_id=WP_000878870.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 209074 210117 . - . ID=gene-CCO53_RS04715;Name=CCO53_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04715;old_locus_tag=CCO53_04705 NZ_NPLZ01000002.1 Protein Homology CDS 209074 210117 . - 0 ID=cds-WP_000798075.1;Parent=gene-CCO53_RS04715;Dbxref=GenBank:WP_000798075.1;Name=WP_000798075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=CCO53_RS04715;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_000798075.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 210128 211507 . - . ID=gene-CCO53_RS04720;Name=CCO53_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04720;old_locus_tag=CCO53_04710 NZ_NPLZ01000002.1 Protein Homology CDS 210128 211507 . - 0 ID=cds-WP_000435317.1;Parent=gene-CCO53_RS04720;Dbxref=GenBank:WP_000435317.1;Name=WP_000435317.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=CCO53_RS04720;product=MFS transporter;protein_id=WP_000435317.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 211534 212610 . - . ID=gene-CCO53_RS04725;Name=CCO53_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04725;old_locus_tag=CCO53_04715 NZ_NPLZ01000002.1 Protein Homology CDS 211534 212610 . - 0 ID=cds-WP_000645184.1;Parent=gene-CCO53_RS04725;Dbxref=GenBank:WP_000645184.1;Name=WP_000645184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=CCO53_RS04725;product=zinc-binding dehydrogenase;protein_id=WP_000645184.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq pseudogene 212903 213400 . + . ID=gene-CCO53_RS23950;Name=CCO53_RS23950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23950;partial=true;pseudo=true;start_range=.,212903 NZ_NPLZ01000002.1 Protein Homology CDS 212903 213400 . + 0 ID=cds-CCO53_RS23950;Parent=gene-CCO53_RS23950;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169644.1;locus_tag=CCO53_RS23950;partial=true;product=glycosyl hydrolase family 18 protein;pseudo=true;start_range=.,212903;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 213503 213781 . - . ID=gene-CCO53_RS04740;Name=CCO53_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04740;old_locus_tag=CCO53_04730 NZ_NPLZ01000002.1 Protein Homology CDS 213503 213781 . - 0 ID=cds-WP_001046864.1;Parent=gene-CCO53_RS04740;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=CCO53_RS04740;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 213823 214236 . - . ID=gene-CCO53_RS04745;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CCO53_RS04745;old_locus_tag=CCO53_04735 NZ_NPLZ01000002.1 Protein Homology CDS 213823 214236 . - 0 ID=cds-WP_001519539.1;Parent=gene-CCO53_RS04745;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=CCO53_RS04745;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 214578 215573 . + . ID=gene-CCO53_RS04750;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=CCO53_RS04750;old_locus_tag=CCO53_04740 NZ_NPLZ01000002.1 Protein Homology CDS 214578 215573 . + 0 ID=cds-WP_000153505.1;Parent=gene-CCO53_RS04750;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=CCO53_RS04750;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 215908 216792 . + . ID=gene-CCO53_RS04760;Name=CCO53_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04760;old_locus_tag=CCO53_04750 NZ_NPLZ01000002.1 Protein Homology CDS 215908 216792 . + 0 ID=cds-WP_076726429.1;Parent=gene-CCO53_RS04760;Dbxref=GenBank:WP_076726429.1;Name=WP_076726429.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=CCO53_RS04760;product=D-hexose-6-phosphate mutarotase;protein_id=WP_076726429.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 216891 217748 . - . ID=gene-CCO53_RS04765;Name=CCO53_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04765;old_locus_tag=CCO53_04755 NZ_NPLZ01000002.1 Protein Homology CDS 216891 217748 . - 0 ID=cds-WP_076726427.1;Parent=gene-CCO53_RS04765;Dbxref=GenBank:WP_076726427.1;Name=WP_076726427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=CCO53_RS04765;product=aldo/keto reductase;protein_id=WP_076726427.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 217845 219041 . - . ID=gene-CCO53_RS04770;Name=CCO53_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04770;old_locus_tag=CCO53_04760 NZ_NPLZ01000002.1 Protein Homology CDS 217845 219041 . - 0 ID=cds-WP_000029242.1;Parent=gene-CCO53_RS04770;Dbxref=GenBank:WP_000029242.1;Name=WP_000029242.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=CCO53_RS04770;product=anaerobic sulfatase maturase;protein_id=WP_000029242.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 219331 220077 . - . ID=gene-CCO53_RS04775;Name=CCO53_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04775;old_locus_tag=CCO53_04765 NZ_NPLZ01000002.1 Protein Homology CDS 219331 220077 . - 0 ID=cds-WP_080160021.1;Parent=gene-CCO53_RS04775;Dbxref=GenBank:WP_080160021.1;Name=WP_080160021.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=CCO53_RS04775;product=MipA/OmpV family protein;protein_id=WP_080160021.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 220503 222437 . + . ID=gene-CCO53_RS04780;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=CCO53_RS04780;old_locus_tag=CCO53_04770 NZ_NPLZ01000002.1 Protein Homology CDS 220503 222437 . + 0 ID=cds-WP_094887603.1;Parent=gene-CCO53_RS04780;Dbxref=GenBank:WP_094887603.1;Name=WP_094887603.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=CCO53_RS04780;product=protein kinase YeaG;protein_id=WP_094887603.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 222560 223846 . + . ID=gene-CCO53_RS04785;Name=CCO53_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04785;old_locus_tag=CCO53_04775 NZ_NPLZ01000002.1 Protein Homology CDS 222560 223846 . + 0 ID=cds-WP_094887579.1;Parent=gene-CCO53_RS04785;Dbxref=GenBank:WP_094887579.1;Name=WP_094887579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746804.1;locus_tag=CCO53_RS04785;product=YeaH/YhbH family protein;protein_id=WP_094887579.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 223998 224216 . - . ID=gene-CCO53_RS04790;Name=CCO53_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04790;old_locus_tag=CCO53_04780 NZ_NPLZ01000002.1 GeneMarkS-2+ CDS 223998 224216 . - 0 ID=cds-WP_139775315.1;Parent=gene-CCO53_RS04790;Dbxref=GenBank:WP_139775315.1;Name=WP_139775315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS04790;product=hypothetical protein;protein_id=WP_139775315.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 224637 226130 . + . ID=gene-CCO53_RS04795;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=CCO53_RS04795;old_locus_tag=CCO53_04785 NZ_NPLZ01000002.1 Protein Homology CDS 224637 226130 . + 0 ID=cds-WP_080160020.1;Parent=gene-CCO53_RS04795;Dbxref=GenBank:WP_080160020.1;Name=WP_080160020.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=CCO53_RS04795;product=diguanylate cyclase DgcJ;protein_id=WP_080160020.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 226180 226698 . + . ID=gene-CCO53_RS04800;Name=CCO53_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04800;old_locus_tag=CCO53_04790 NZ_NPLZ01000002.1 Protein Homology CDS 226180 226698 . + 0 ID=cds-WP_010989016.1;Parent=gene-CCO53_RS04800;Dbxref=GenBank:WP_010989016.1;Name=WP_010989016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=CCO53_RS04800;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_010989016.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 226695 226802 . - . ID=gene-CCO53_RS04805;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=CCO53_RS04805;old_locus_tag=CCO53_04795 NZ_NPLZ01000002.1 Protein Homology CDS 226695 226802 . - 0 ID=cds-WP_000272237.1;Parent=gene-CCO53_RS04805;Dbxref=GenBank:WP_000272237.1;Name=WP_000272237.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=CCO53_RS04805;product=small membrane protein YoaI;protein_id=WP_000272237.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 227008 227454 . + . ID=gene-CCO53_RS04810;Name=CCO53_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04810;old_locus_tag=CCO53_04800 NZ_NPLZ01000002.1 Protein Homology CDS 227008 227454 . + 0 ID=cds-WP_000460698.1;Parent=gene-CCO53_RS04810;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=CCO53_RS04810;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 227434 228228 . - . ID=gene-CCO53_RS04815;Name=CCO53_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04815;old_locus_tag=CCO53_04805 NZ_NPLZ01000002.1 Protein Homology CDS 227434 228228 . - 0 ID=cds-WP_000579798.1;Parent=gene-CCO53_RS04815;Dbxref=GenBank:WP_000579798.1;Name=WP_000579798.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=CCO53_RS04815;product=AraC family transcriptional regulator;protein_id=WP_000579798.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 228329 229513 . + . ID=gene-CCO53_RS04820;Name=CCO53_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04820;old_locus_tag=CCO53_04810 NZ_NPLZ01000002.1 Protein Homology CDS 228329 229513 . + 0 ID=cds-WP_094887580.1;Parent=gene-CCO53_RS04820;Dbxref=GenBank:WP_094887580.1;Name=WP_094887580.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=CCO53_RS04820;product=CynX/NimT family MFS transporter;protein_id=WP_094887580.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 229632 229979 . + . ID=gene-CCO53_RS04825;Name=CCO53_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04825;old_locus_tag=CCO53_04815 NZ_NPLZ01000002.1 Protein Homology CDS 229632 229979 . + 0 ID=cds-WP_039517857.1;Parent=gene-CCO53_RS04825;Dbxref=GenBank:WP_039517857.1;Name=WP_039517857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=CCO53_RS04825;product=DUF488 domain-containing protein;protein_id=WP_039517857.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 229965 230276 . - . ID=gene-CCO53_RS04830;Name=CCO53_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04830;old_locus_tag=CCO53_04820 NZ_NPLZ01000002.1 Protein Homology CDS 229965 230276 . - 0 ID=cds-WP_000487126.1;Parent=gene-CCO53_RS04830;Dbxref=GenBank:WP_000487126.1;Name=WP_000487126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=CCO53_RS04830;product=hypothetical protein;protein_id=WP_000487126.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 230345 230596 . - . ID=gene-CCO53_RS04835;Name=CCO53_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04835;old_locus_tag=CCO53_04825 NZ_NPLZ01000002.1 Protein Homology CDS 230345 230596 . - 0 ID=cds-WP_000673492.1;Parent=gene-CCO53_RS04835;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=CCO53_RS04835;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 230792 230890 . + . ID=gene-CCO53_RS04840;Name=CCO53_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04840;old_locus_tag=CCO53_04830 NZ_NPLZ01000002.1 Protein Homology CDS 230792 230890 . + 0 ID=cds-WP_001589065.1;Parent=gene-CCO53_RS04840;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=CCO53_RS04840;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 231029 231277 . - . ID=gene-CCO53_RS04845;Name=CCO53_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04845;old_locus_tag=CCO53_04835 NZ_NPLZ01000002.1 Protein Homology CDS 231029 231277 . - 0 ID=cds-WP_000512149.1;Parent=gene-CCO53_RS04845;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=CCO53_RS04845;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 231591 232232 . - . ID=gene-CCO53_RS04855;Name=CCO53_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04855;old_locus_tag=CCO53_04845 NZ_NPLZ01000002.1 Protein Homology CDS 231591 232232 . - 0 ID=cds-WP_001669273.1;Parent=gene-CCO53_RS04855;Dbxref=GenBank:WP_001669273.1;Name=WP_001669273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=CCO53_RS04855;product=hypothetical protein;protein_id=WP_001669273.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 232462 232644 . - . ID=gene-CCO53_RS04860;Name=CCO53_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04860;old_locus_tag=CCO53_04850 NZ_NPLZ01000002.1 Protein Homology CDS 232462 232644 . - 0 ID=cds-WP_000513733.1;Parent=gene-CCO53_RS04860;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=CCO53_RS04860;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 232647 233009 . - . ID=gene-CCO53_RS04865;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=CCO53_RS04865;old_locus_tag=CCO53_04855 NZ_NPLZ01000002.1 Protein Homology CDS 232647 233009 . - 0 ID=cds-WP_001248993.1;Parent=gene-CCO53_RS04865;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=CCO53_RS04865;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 233182 233820 . - . ID=gene-CCO53_RS04875;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=CCO53_RS04875;old_locus_tag=CCO53_04865 NZ_NPLZ01000002.1 Protein Homology CDS 233182 233820 . - 0 ID=cds-WP_000457190.1;Parent=gene-CCO53_RS04875;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=CCO53_RS04875;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 234017 234562 . - . ID=gene-CCO53_RS04880;Name=CCO53_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04880;old_locus_tag=CCO53_04870 NZ_NPLZ01000002.1 Protein Homology CDS 234017 234562 . - 0 ID=cds-WP_000617984.1;Parent=gene-CCO53_RS04880;Dbxref=GenBank:WP_000617984.1;Name=WP_000617984.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=CCO53_RS04880;product=chorismate mutase;protein_id=WP_000617984.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq pseudogene 234645 234799 . + . ID=gene-CCO53_RS23955;Name=CCO53_RS23955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23955;old_locus_tag=CCO53_04875;pseudo=true NZ_NPLZ01000002.1 Protein Homology CDS 234645 234799 . + 0 ID=cds-CCO53_RS23955;Parent=gene-CCO53_RS23955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=CCO53_RS23955;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 234878 235126 . + . ID=gene-CCO53_RS04890;Name=CCO53_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04890;old_locus_tag=CCO53_04880 NZ_NPLZ01000002.1 Protein Homology CDS 234878 235126 . + 0 ID=cds-WP_000208086.1;Parent=gene-CCO53_RS04890;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=CCO53_RS04890;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 235381 236229 . - . ID=gene-CCO53_RS04900;Name=CCO53_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04900;old_locus_tag=CCO53_04890 NZ_NPLZ01000002.1 Protein Homology CDS 235381 236229 . - 0 ID=cds-WP_000190263.1;Parent=gene-CCO53_RS04900;Dbxref=GenBank:WP_000190263.1;Name=WP_000190263.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=CCO53_RS04900;product=MerR family transcriptional regulator;protein_id=WP_000190263.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 236298 236891 . - . ID=gene-CCO53_RS04905;Name=CCO53_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04905;old_locus_tag=CCO53_04895 NZ_NPLZ01000002.1 Protein Homology CDS 236298 236891 . - 0 ID=cds-WP_001534706.1;Parent=gene-CCO53_RS04905;Dbxref=GenBank:WP_001534706.1;Name=WP_001534706.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=CCO53_RS04905;product=helix-turn-helix domain-containing protein;protein_id=WP_001534706.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 237036 237824 . - . ID=gene-CCO53_RS04910;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=CCO53_RS04910;old_locus_tag=CCO53_04900 NZ_NPLZ01000002.1 Protein Homology CDS 237036 237824 . - 0 ID=cds-WP_094887581.1;Parent=gene-CCO53_RS04910;Dbxref=GenBank:WP_094887581.1;Name=WP_094887581.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=CCO53_RS04910;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_094887581.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 237933 238580 . - . ID=gene-CCO53_RS04915;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=CCO53_RS04915;old_locus_tag=CCO53_04905 NZ_NPLZ01000002.1 Protein Homology CDS 237933 238580 . - 0 ID=cds-WP_001537483.1;Parent=gene-CCO53_RS04915;Dbxref=GenBank:WP_001537483.1;Name=WP_001537483.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=CCO53_RS04915;product=metal-binding protein ZinT;protein_id=WP_001537483.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 238692 238768 . - . ID=gene-CCO53_RS04920;Name=CCO53_RS04920;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS04920;old_locus_tag=CCO53_04910 NZ_NPLZ01000002.1 tRNAscan-SE tRNA 238692 238768 . - . ID=rna-CCO53_RS04920;Parent=gene-CCO53_RS04920;anticodon=(pos:complement(238732..238734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS04920;product=tRNA-Arg NZ_NPLZ01000002.1 tRNAscan-SE exon 238692 238768 . - . ID=exon-CCO53_RS04920-1;Parent=rna-CCO53_RS04920;anticodon=(pos:complement(238732..238734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS04920;product=tRNA-Arg NZ_NPLZ01000002.1 RefSeq gene 238777 239103 . - . ID=gene-CCO53_RS04925;Name=CCO53_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04925;old_locus_tag=CCO53_04915 NZ_NPLZ01000002.1 Protein Homology CDS 238777 239103 . - 0 ID=cds-WP_001183699.1;Parent=gene-CCO53_RS04925;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=CCO53_RS04925;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 239297 240430 . + . ID=gene-CCO53_RS04930;Name=CCO53_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04930;old_locus_tag=CCO53_04920 NZ_NPLZ01000002.1 Protein Homology CDS 239297 240430 . + 0 ID=cds-WP_000456073.1;Parent=gene-CCO53_RS04930;Dbxref=GenBank:WP_000456073.1;Name=WP_000456073.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=CCO53_RS04930;product=mechanosensitive ion channel family protein;protein_id=WP_000456073.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 240512 241102 . - . ID=gene-CCO53_RS04935;Name=CCO53_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04935;old_locus_tag=CCO53_04925 NZ_NPLZ01000002.1 Protein Homology CDS 240512 241102 . - 0 ID=cds-WP_000947459.1;Parent=gene-CCO53_RS04935;Dbxref=GenBank:WP_000947459.1;Name=WP_000947459.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=CCO53_RS04935;product=ATP-binding cassette domain-containing protein;protein_id=WP_000947459.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 241096 241893 . - . ID=gene-CCO53_RS04940;Name=CCO53_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04940;old_locus_tag=CCO53_04930 NZ_NPLZ01000002.1 Protein Homology CDS 241096 241893 . - 0 ID=cds-WP_000950207.1;Parent=gene-CCO53_RS04940;Dbxref=GenBank:WP_000950207.1;Name=WP_000950207.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=CCO53_RS04940;product=ATP-binding cassette domain-containing protein;protein_id=WP_000950207.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 241887 242699 . - . ID=gene-CCO53_RS04945;Name=CCO53_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04945;old_locus_tag=CCO53_04935 NZ_NPLZ01000002.1 Protein Homology CDS 241887 242699 . - 0 ID=cds-WP_094887582.1;Parent=gene-CCO53_RS04945;Dbxref=GenBank:WP_094887582.1;Name=WP_094887582.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=CCO53_RS04945;product=ABC transporter permease;protein_id=WP_094887582.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 242689 243663 . - . ID=gene-CCO53_RS04950;Name=CCO53_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04950;old_locus_tag=CCO53_04940 NZ_NPLZ01000002.1 Protein Homology CDS 242689 243663 . - 0 ID=cds-WP_058331223.1;Parent=gene-CCO53_RS04950;Dbxref=GenBank:WP_058331223.1;Name=WP_058331223.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=CCO53_RS04950;product=ABC transporter permease;protein_id=WP_058331223.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 243663 245297 . - . ID=gene-CCO53_RS04955;Name=CCO53_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04955;old_locus_tag=CCO53_04945 NZ_NPLZ01000002.1 Protein Homology CDS 243663 245297 . - 0 ID=cds-WP_058331224.1;Parent=gene-CCO53_RS04955;Dbxref=GenBank:WP_058331224.1;Name=WP_058331224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=CCO53_RS04955;product=ABC transporter substrate-binding protein;protein_id=WP_058331224.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 245979 246293 . + . ID=gene-CCO53_RS04960;Name=CCO53_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04960;old_locus_tag=CCO53_04950 NZ_NPLZ01000002.1 Protein Homology CDS 245979 246293 . + 0 ID=cds-WP_000182479.1;Parent=gene-CCO53_RS04960;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=CCO53_RS04960;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 246442 246972 . + . ID=gene-CCO53_RS04965;Name=CCO53_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04965;old_locus_tag=CCO53_04955 NZ_NPLZ01000002.1 Protein Homology CDS 246442 246972 . + 0 ID=cds-WP_000929974.1;Parent=gene-CCO53_RS04965;Dbxref=GenBank:WP_000929974.1;Name=WP_000929974.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=CCO53_RS04965;product=cytochrome b;protein_id=WP_000929974.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 247055 248098 . - . ID=gene-CCO53_RS04970;Name=CCO53_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04970;old_locus_tag=CCO53_04960 NZ_NPLZ01000002.1 Protein Homology CDS 247055 248098 . - 0 ID=cds-WP_000780158.1;Parent=gene-CCO53_RS04970;Dbxref=GenBank:WP_000780158.1;Name=WP_000780158.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=CCO53_RS04970;product=sialidase family protein;protein_id=WP_000780158.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 248437 248904 . - . ID=gene-CCO53_RS04975;Name=CCO53_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04975;old_locus_tag=CCO53_04965 NZ_NPLZ01000002.1 Protein Homology CDS 248437 248904 . - 0 ID=cds-WP_001218118.1;Parent=gene-CCO53_RS04975;Dbxref=GenBank:WP_001218118.1;Name=WP_001218118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=CCO53_RS04975;product=Hsp20 family protein;protein_id=WP_001218118.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 249099 249329 . - . ID=gene-CCO53_RS04980;Name=CCO53_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04980;old_locus_tag=CCO53_04970 NZ_NPLZ01000002.1 Protein Homology CDS 249099 249329 . - 0 ID=cds-WP_077905118.1;Parent=gene-CCO53_RS04980;Dbxref=GenBank:WP_077905118.1;Name=WP_077905118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=CCO53_RS04980;product=hypothetical protein;protein_id=WP_077905118.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 249529 249654 . - . ID=gene-CCO53_RS24190;Name=CCO53_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24190;old_locus_tag=CCO53_04975 NZ_NPLZ01000002.1 Protein Homology CDS 249529 249654 . - 0 ID=cds-WP_000758944.1;Parent=gene-CCO53_RS24190;Dbxref=GenBank:WP_000758944.1;Name=WP_000758944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000758943.1;locus_tag=CCO53_RS24190;product=hypothetical protein;protein_id=WP_000758944.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 250032 250376 . + . ID=gene-CCO53_RS04990;Name=CCO53_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS04990;old_locus_tag=CCO53_04980 NZ_NPLZ01000002.1 Protein Homology CDS 250032 250376 . + 0 ID=cds-WP_000977720.1;Parent=gene-CCO53_RS04990;Dbxref=GenBank:WP_000977720.1;Name=WP_000977720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=CCO53_RS04990;product=c-type lysozyme inhibitor;protein_id=WP_000977720.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 251132 251208 . - . ID=gene-CCO53_RS04995;Name=CCO53_RS04995;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS04995;old_locus_tag=CCO53_04985 NZ_NPLZ01000002.1 tRNAscan-SE tRNA 251132 251208 . - . ID=rna-CCO53_RS04995;Parent=gene-CCO53_RS04995;anticodon=(pos:complement(251172..251174));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS04995;product=tRNA-Arg NZ_NPLZ01000002.1 tRNAscan-SE exon 251132 251208 . - . ID=exon-CCO53_RS04995-1;Parent=rna-CCO53_RS04995;anticodon=(pos:complement(251172..251174));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS04995;product=tRNA-Arg NZ_NPLZ01000002.1 RefSeq gene 251613 252170 . - . ID=gene-CCO53_RS05000;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=CCO53_RS05000;old_locus_tag=CCO53_04990 NZ_NPLZ01000002.1 Protein Homology CDS 251613 252170 . - 0 ID=cds-WP_058331227.1;Parent=gene-CCO53_RS05000;Dbxref=GenBank:WP_058331227.1;Name=WP_058331227.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=CCO53_RS05000;product=virulence membrane protein PagC;protein_id=WP_058331227.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 252975 253238 . + . ID=gene-CCO53_RS05010;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=CCO53_RS05010;old_locus_tag=CCO53_05000 NZ_NPLZ01000002.1 Protein Homology CDS 252975 253238 . + 0 ID=cds-WP_058331230.1;Parent=gene-CCO53_RS05010;Dbxref=GenBank:WP_058331230.1;Name=WP_058331230.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=CCO53_RS05010;product=virulence protein PagD;protein_id=WP_058331230.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 253370 253582 . + . ID=gene-CCO53_RS05015;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=CCO53_RS05015;old_locus_tag=CCO53_05005 NZ_NPLZ01000002.1 Protein Homology CDS 253370 253582 . + 0 ID=cds-WP_001537306.1;Parent=gene-CCO53_RS05015;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=CCO53_RS05015;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 253997 254518 . + . ID=gene-CCO53_RS05020;Name=CCO53_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05020;old_locus_tag=CCO53_05010 NZ_NPLZ01000002.1 Protein Homology CDS 253997 254518 . + 0 ID=cds-WP_058331231.1;Parent=gene-CCO53_RS05020;Dbxref=GenBank:WP_058331231.1;Name=WP_058331231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=CCO53_RS05020;product=RICIN domain-containing protein;protein_id=WP_058331231.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 254709 254948 . + . ID=gene-CCO53_RS05025;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=CCO53_RS05025;old_locus_tag=CCO53_05015 NZ_NPLZ01000002.1 Protein Homology CDS 254709 254948 . + 0 ID=cds-WP_000497451.1;Parent=gene-CCO53_RS05025;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=CCO53_RS05025;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq pseudogene 255093 255191 . - . ID=gene-CCO53_RS24320;Name=CCO53_RS24320;end_range=255191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24320;partial=true;pseudo=true;start_range=.,255093 NZ_NPLZ01000002.1 Protein Homology CDS 255093 255191 . - 0 ID=cds-CCO53_RS24320;Parent=gene-CCO53_RS24320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=255191,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001034099.1;locus_tag=CCO53_RS24320;partial=true;product=hypothetical protein;pseudo=true;start_range=.,255093;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 255166 255330 . - . ID=gene-CCO53_RS23810;Name=CCO53_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23810;old_locus_tag=CCO53_05020 NZ_NPLZ01000002.1 GeneMarkS-2+ CDS 255166 255330 . - 0 ID=cds-WP_058331232.1;Parent=gene-CCO53_RS23810;Dbxref=GenBank:WP_058331232.1;Name=WP_058331232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS23810;product=hypothetical protein;protein_id=WP_058331232.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 255828 256646 . + . ID=gene-CCO53_RS05035;Name=cdtB;gbkey=Gene;gene=cdtB;gene_biotype=protein_coding;locus_tag=CCO53_RS05035;old_locus_tag=CCO53_05025 NZ_NPLZ01000002.1 Protein Homology CDS 255828 256646 . + 0 ID=cds-WP_076728165.1;Parent=gene-CCO53_RS05035;Dbxref=GenBank:WP_076728165.1;Name=WP_076728165.1;gbkey=CDS;gene=cdtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233072.1;locus_tag=CCO53_RS05035;product=cytolethal distending toxin subunit B family protein;protein_id=WP_076728165.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 256719 257096 . + . ID=gene-CCO53_RS05040;Name=CCO53_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05040;old_locus_tag=CCO53_05030 NZ_NPLZ01000002.1 Protein Homology CDS 256719 257096 . + 0 ID=cds-WP_001277616.1;Parent=gene-CCO53_RS05040;Dbxref=GenBank:WP_001277616.1;Name=WP_001277616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277616.1;locus_tag=CCO53_RS05040;product=DUF1353 domain-containing protein;protein_id=WP_001277616.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 257245 257787 . - . ID=gene-CCO53_RS05045;Name=CCO53_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05045;old_locus_tag=CCO53_05035 NZ_NPLZ01000002.1 Protein Homology CDS 257245 257787 . - 0 ID=cds-WP_000158843.1;Parent=gene-CCO53_RS05045;Dbxref=GenBank:WP_000158843.1;Name=WP_000158843.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016429.1;locus_tag=CCO53_RS05045;product=glycoside hydrolase family 108 protein;protein_id=WP_000158843.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 257979 258707 . - . ID=gene-CCO53_RS05050;Name=pltA;gbkey=Gene;gene=pltA;gene_biotype=protein_coding;locus_tag=CCO53_RS05050;old_locus_tag=CCO53_05040 NZ_NPLZ01000002.1 Protein Homology CDS 257979 258707 . - 0 ID=cds-WP_058331233.1;Parent=gene-CCO53_RS05050;Dbxref=GenBank:WP_058331233.1;Name=WP_058331233.1;gbkey=CDS;gene=pltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766395.1;locus_tag=CCO53_RS05050;product=typhoid-like toxin S-CDT ADP-ribosylating subunit PltA;protein_id=WP_058331233.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 258724 259137 . - . ID=gene-CCO53_RS05055;Name=CCO53_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05055;old_locus_tag=CCO53_05045 NZ_NPLZ01000002.1 Protein Homology CDS 258724 259137 . - 0 ID=cds-WP_058331234.1;Parent=gene-CCO53_RS05055;Dbxref=GenBank:WP_058331234.1;Name=WP_058331234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281950.1;locus_tag=CCO53_RS05055;product=subtilase cytotoxin subunit B;protein_id=WP_058331234.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 259570 259962 . - . ID=gene-CCO53_RS24325;Name=CCO53_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24325;old_locus_tag=CCO53_05050 NZ_NPLZ01000002.1 Protein Homology CDS 259570 259962 . - 0 ID=cds-WP_058331235.1;Parent=gene-CCO53_RS24325;Dbxref=GenBank:WP_058331235.1;Name=WP_058331235.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023884.6;locus_tag=CCO53_RS24325;product=leucine-rich repeat domain-containing protein;protein_id=WP_058331235.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq pseudogene 259904 260095 . - . ID=gene-CCO53_RS05065;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=CCO53_RS05065;old_locus_tag=CCO53_05055;partial=true;pseudo=true;start_range=.,259904 NZ_NPLZ01000002.1 Protein Homology CDS 259904 260095 . - 0 ID=cds-CCO53_RS05065;Parent=gene-CCO53_RS05065;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=CCO53_RS05065;partial=true;product=IS200/IS605-like element IS200F family transposase;pseudo=true;start_range=.,259904;transl_table=11 NZ_NPLZ01000002.1 RefSeq pseudogene 260247 260495 . - . ID=gene-CCO53_RS05070;Name=CCO53_RS05070;end_range=260495,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS05070;old_locus_tag=CCO53_05060;partial=true;pseudo=true NZ_NPLZ01000002.1 Protein Homology CDS 260247 260495 . - 0 ID=cds-CCO53_RS05070;Parent=gene-CCO53_RS05070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=260495,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611788.1;locus_tag=CCO53_RS05070;partial=true;product=IS4/IS5 family transposase;pseudo=true;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 260719 261969 . - . ID=gene-CCO53_RS05075;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CCO53_RS05075;old_locus_tag=CCO53_05065 NZ_NPLZ01000002.1 Protein Homology CDS 260719 261969 . - 0 ID=cds-WP_000444508.1;Parent=gene-CCO53_RS05075;Dbxref=GenBank:WP_000444508.1;Name=WP_000444508.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=CCO53_RS05075;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444508.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 262141 262806 . + . ID=gene-CCO53_RS05080;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=CCO53_RS05080;old_locus_tag=CCO53_05070 NZ_NPLZ01000002.1 Protein Homology CDS 262141 262806 . + 0 ID=cds-WP_080160473.1;Parent=gene-CCO53_RS05080;Dbxref=GenBank:WP_080160473.1;Name=WP_080160473.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=CCO53_RS05080;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_080160473.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 262803 263132 . + . ID=gene-CCO53_RS05085;Name=CCO53_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05085;old_locus_tag=CCO53_05075 NZ_NPLZ01000002.1 Protein Homology CDS 262803 263132 . + 0 ID=cds-WP_000825956.1;Parent=gene-CCO53_RS05085;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=CCO53_RS05085;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 263144 263605 . + . ID=gene-CCO53_RS05090;Name=CCO53_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05090;old_locus_tag=CCO53_05080 NZ_NPLZ01000002.1 Protein Homology CDS 263144 263605 . + 0 ID=cds-WP_000476070.1;Parent=gene-CCO53_RS05090;Dbxref=GenBank:WP_000476070.1;Name=WP_000476070.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=CCO53_RS05090;product=NUDIX hydrolase;protein_id=WP_000476070.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 263659 264765 . + . ID=gene-CCO53_RS05095;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=CCO53_RS05095;old_locus_tag=CCO53_05085 NZ_NPLZ01000002.1 Protein Homology CDS 263659 264765 . + 0 ID=cds-WP_094887583.1;Parent=gene-CCO53_RS05095;Dbxref=GenBank:WP_094887583.1;Name=WP_094887583.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=CCO53_RS05095;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_094887583.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 264852 265493 . + . ID=gene-CCO53_RS05100;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=CCO53_RS05100;old_locus_tag=CCO53_05090 NZ_NPLZ01000002.1 Protein Homology CDS 264852 265493 . + 0 ID=cds-WP_001519653.1;Parent=gene-CCO53_RS05100;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=CCO53_RS05100;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 265497 266867 . + . ID=gene-CCO53_RS05105;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CCO53_RS05105;old_locus_tag=CCO53_05095 NZ_NPLZ01000002.1 Protein Homology CDS 265497 266867 . + 0 ID=cds-WP_000423758.1;Parent=gene-CCO53_RS05105;Dbxref=GenBank:WP_000423758.1;Name=WP_000423758.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=CCO53_RS05105;product=adenylosuccinate lyase;protein_id=WP_000423758.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 266994 267665 . + . ID=gene-CCO53_RS05110;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=CCO53_RS05110;old_locus_tag=CCO53_05100 NZ_NPLZ01000002.1 Protein Homology CDS 266994 267665 . + 0 ID=cds-WP_001537766.1;Parent=gene-CCO53_RS05110;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=CCO53_RS05110;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 267665 269128 . + . ID=gene-CCO53_RS05115;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=CCO53_RS05115;old_locus_tag=CCO53_05105 NZ_NPLZ01000002.1 Protein Homology CDS 267665 269128 . + 0 ID=cds-WP_001031687.1;Parent=gene-CCO53_RS05115;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=CCO53_RS05115;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 269209 270330 . + . ID=gene-CCO53_RS05120;Name=CCO53_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05120;old_locus_tag=CCO53_05110 NZ_NPLZ01000002.1 Protein Homology CDS 269209 270330 . + 0 ID=cds-WP_094887584.1;Parent=gene-CCO53_RS05120;Dbxref=GenBank:WP_094887584.1;Name=WP_094887584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=CCO53_RS05120;product=cupin domain-containing protein;protein_id=WP_094887584.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 270370 271704 . - . ID=gene-CCO53_RS05125;Name=CCO53_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05125;old_locus_tag=CCO53_05115 NZ_NPLZ01000002.1 Protein Homology CDS 270370 271704 . - 0 ID=cds-WP_094887585.1;Parent=gene-CCO53_RS05125;Dbxref=GenBank:WP_094887585.1;Name=WP_094887585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=CCO53_RS05125;product=hypothetical protein;protein_id=WP_094887585.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 271708 272937 . - . ID=gene-CCO53_RS05130;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CCO53_RS05130;old_locus_tag=CCO53_05120 NZ_NPLZ01000002.1 Protein Homology CDS 271708 272937 . - 0 ID=cds-WP_094887586.1;Parent=gene-CCO53_RS05130;Dbxref=GenBank:WP_094887586.1;Name=WP_094887586.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=CCO53_RS05130;product=peptidase T;protein_id=WP_094887586.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 273188 274324 . + . ID=gene-CCO53_RS05140;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=CCO53_RS05140;old_locus_tag=CCO53_05130 NZ_NPLZ01000002.1 Protein Homology CDS 273188 274324 . + 0 ID=cds-WP_058331236.1;Parent=gene-CCO53_RS05140;Dbxref=GenBank:WP_058331236.1;Name=WP_058331236.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=CCO53_RS05140;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_058331236.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 274308 275171 . + . ID=gene-CCO53_RS05145;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=CCO53_RS05145;old_locus_tag=CCO53_05135 NZ_NPLZ01000002.1 Protein Homology CDS 274308 275171 . + 0 ID=cds-WP_058331237.1;Parent=gene-CCO53_RS05145;Dbxref=GenBank:WP_058331237.1;Name=WP_058331237.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=CCO53_RS05145;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_058331237.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq pseudogene 275499 276508 . + . ID=gene-CCO53_RS05155;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=pseudogene;locus_tag=CCO53_RS05155;old_locus_tag=CCO53_05145;pseudo=true NZ_NPLZ01000002.1 Protein Homology CDS 275499 276508 . + 0 ID=cds-CCO53_RS05155;Parent=gene-CCO53_RS05155;Note=frameshifted;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=CCO53_RS05155;product=SPI-2 type III secretion system effector SifA;pseudo=true;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 276824 277603 . + . ID=gene-CCO53_RS05160;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=CCO53_RS05160;old_locus_tag=CCO53_05150 NZ_NPLZ01000002.1 Protein Homology CDS 276824 277603 . + 0 ID=cds-WP_000580299.1;Parent=gene-CCO53_RS05160;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=CCO53_RS05160;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 277628 278674 . + . ID=gene-CCO53_RS05165;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=CCO53_RS05165;old_locus_tag=CCO53_05155 NZ_NPLZ01000002.1 Protein Homology CDS 277628 278674 . + 0 ID=cds-WP_000759329.1;Parent=gene-CCO53_RS05165;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=CCO53_RS05165;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 278756 279577 . - . ID=gene-CCO53_RS05170;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=CCO53_RS05170;old_locus_tag=CCO53_05160 NZ_NPLZ01000002.1 Protein Homology CDS 278756 279577 . - 0 ID=cds-WP_001191856.1;Parent=gene-CCO53_RS05170;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=CCO53_RS05170;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 279596 280507 . - . ID=gene-CCO53_RS05175;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=CCO53_RS05175;old_locus_tag=CCO53_05165 NZ_NPLZ01000002.1 Protein Homology CDS 279596 280507 . - 0 ID=cds-WP_000291331.1;Parent=gene-CCO53_RS05175;Dbxref=GenBank:WP_000291331.1;Name=WP_000291331.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=CCO53_RS05175;product=N-acetylglucosamine kinase;protein_id=WP_000291331.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 280536 281780 . - . ID=gene-CCO53_RS05180;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=CCO53_RS05180;old_locus_tag=CCO53_05170 NZ_NPLZ01000002.1 Protein Homology CDS 280536 281780 . - 0 ID=cds-WP_000168091.1;Parent=gene-CCO53_RS05180;Dbxref=GenBank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=CCO53_RS05180;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 281780 282481 . - . ID=gene-CCO53_RS05185;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=CCO53_RS05185;old_locus_tag=CCO53_05175 NZ_NPLZ01000002.1 Protein Homology CDS 281780 282481 . - 0 ID=cds-WP_001033714.1;Parent=gene-CCO53_RS05185;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=CCO53_RS05185;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 282474 283673 . - . ID=gene-CCO53_RS05190;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=CCO53_RS05190;old_locus_tag=CCO53_05180 NZ_NPLZ01000002.1 Protein Homology CDS 282474 283673 . - 0 ID=cds-WP_001518787.1;Parent=gene-CCO53_RS05190;Dbxref=GenBank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=CCO53_RS05190;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 284011 287457 . + . ID=gene-CCO53_RS05195;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CCO53_RS05195;old_locus_tag=CCO53_05185 NZ_NPLZ01000002.1 Protein Homology CDS 284011 287457 . + 0 ID=cds-WP_001114323.1;Parent=gene-CCO53_RS05195;Dbxref=GenBank:WP_001114323.1;Name=WP_001114323.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=CCO53_RS05195;product=transcription-repair coupling factor;protein_id=WP_001114323.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 287605 288570 . + . ID=gene-CCO53_RS05200;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=CCO53_RS05200;old_locus_tag=CCO53_05190 NZ_NPLZ01000002.1 Protein Homology CDS 287605 288570 . + 0 ID=cds-WP_000482967.1;Parent=gene-CCO53_RS05200;Dbxref=GenBank:WP_000482967.1;Name=WP_000482967.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=CCO53_RS05200;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482967.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 288667 288924 . - . ID=gene-CCO53_RS05205;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=CCO53_RS05205;old_locus_tag=CCO53_05195 NZ_NPLZ01000002.1 Protein Homology CDS 288667 288924 . - 0 ID=cds-WP_000800159.1;Parent=gene-CCO53_RS05205;Dbxref=GenBank:WP_000800159.1;Name=WP_000800159.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=CCO53_RS05205;product=multiple stress resistance protein BhsA;protein_id=WP_000800159.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 289166 289801 . + . ID=gene-CCO53_RS05210;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=CCO53_RS05210;old_locus_tag=CCO53_05200 NZ_NPLZ01000002.1 Protein Homology CDS 289166 289801 . + 0 ID=cds-WP_000205986.1;Parent=gene-CCO53_RS05210;Dbxref=GenBank:WP_000205986.1;Name=WP_000205986.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=CCO53_RS05210;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205986.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 289876 290415 . - . ID=gene-CCO53_RS05215;Name=CCO53_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05215;old_locus_tag=CCO53_05205 NZ_NPLZ01000002.1 Protein Homology CDS 289876 290415 . - 0 ID=cds-WP_001043449.1;Parent=gene-CCO53_RS05215;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=CCO53_RS05215;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 290594 291898 . - . ID=gene-CCO53_RS05220;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=CCO53_RS05220;old_locus_tag=CCO53_05210 NZ_NPLZ01000002.1 Protein Homology CDS 290594 291898 . - 0 ID=cds-WP_000211053.1;Parent=gene-CCO53_RS05220;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=CCO53_RS05220;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 292153 292695 . - . ID=gene-CCO53_RS05225;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=CCO53_RS05225;old_locus_tag=CCO53_05215 NZ_NPLZ01000002.1 Protein Homology CDS 292153 292695 . - 0 ID=cds-WP_094887588.1;Parent=gene-CCO53_RS05225;Dbxref=GenBank:WP_094887588.1;Name=WP_094887588.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=CCO53_RS05225;product=alpha/beta hydrolase YcfP;protein_id=WP_094887588.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 292720 293745 . - . ID=gene-CCO53_RS05230;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=CCO53_RS05230;old_locus_tag=CCO53_05220 NZ_NPLZ01000002.1 Protein Homology CDS 292720 293745 . - 0 ID=cds-WP_080210277.1;Parent=gene-CCO53_RS05230;Dbxref=GenBank:WP_080210277.1;Name=WP_080210277.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=CCO53_RS05230;product=beta-N-acetylhexosaminidase;protein_id=WP_080210277.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 293756 294580 . - . ID=gene-CCO53_RS05235;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=CCO53_RS05235;old_locus_tag=CCO53_05225 NZ_NPLZ01000002.1 Protein Homology CDS 293756 294580 . - 0 ID=cds-WP_001257320.1;Parent=gene-CCO53_RS05235;Dbxref=GenBank:WP_001257320.1;Name=WP_001257320.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=CCO53_RS05235;product=thiamine kinase;protein_id=WP_001257320.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 294561 295199 . - . ID=gene-CCO53_RS05240;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=CCO53_RS05240;old_locus_tag=CCO53_05230 NZ_NPLZ01000002.1 Protein Homology CDS 294561 295199 . - 0 ID=cds-WP_000164355.1;Parent=gene-CCO53_RS05240;Dbxref=GenBank:WP_000164355.1;Name=WP_000164355.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=CCO53_RS05240;product=penicillin-binding protein activator LpoB;protein_id=WP_000164355.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 295213 295587 . - . ID=gene-CCO53_RS05245;Name=CCO53_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05245;old_locus_tag=CCO53_05235 NZ_NPLZ01000002.1 Protein Homology CDS 295213 295587 . - 0 ID=cds-WP_000589563.1;Parent=gene-CCO53_RS05245;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=CCO53_RS05245;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 295590 295949 . - . ID=gene-CCO53_RS05250;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=CCO53_RS05250;old_locus_tag=CCO53_05240 NZ_NPLZ01000002.1 Protein Homology CDS 295590 295949 . - 0 ID=cds-WP_001532068.1;Parent=gene-CCO53_RS05250;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=CCO53_RS05250;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 296291 298465 . + . ID=gene-CCO53_RS05255;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=CCO53_RS05255;old_locus_tag=CCO53_05245 NZ_NPLZ01000002.1 Protein Homology CDS 296291 298465 . + 0 ID=cds-WP_017466045.1;Parent=gene-CCO53_RS05255;Dbxref=GenBank:WP_017466045.1;Name=WP_017466045.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=CCO53_RS05255;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_017466045.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 298550 299983 . - . ID=gene-CCO53_RS05260;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CCO53_RS05260;old_locus_tag=CCO53_05250 NZ_NPLZ01000002.1 Protein Homology CDS 298550 299983 . - 0 ID=cds-WP_000475705.1;Parent=gene-CCO53_RS05260;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=CCO53_RS05260;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 300278 301075 . - . ID=gene-CCO53_RS05265;Name=CCO53_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05265;old_locus_tag=CCO53_05255 NZ_NPLZ01000002.1 Protein Homology CDS 300278 301075 . - 0 ID=cds-WP_000480274.1;Parent=gene-CCO53_RS05265;Dbxref=GenBank:WP_000480274.1;Name=WP_000480274.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=CCO53_RS05265;product=metal-dependent hydrolase;protein_id=WP_000480274.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 301086 302090 . - . ID=gene-CCO53_RS05270;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=CCO53_RS05270;old_locus_tag=CCO53_05260 NZ_NPLZ01000002.1 Protein Homology CDS 301086 302090 . - 0 ID=cds-WP_000872450.1;Parent=gene-CCO53_RS05270;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=CCO53_RS05270;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 302087 302728 . - . ID=gene-CCO53_RS05275;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CCO53_RS05275;old_locus_tag=CCO53_05265 NZ_NPLZ01000002.1 Protein Homology CDS 302087 302728 . - 0 ID=cds-WP_000535396.1;Parent=gene-CCO53_RS05275;Dbxref=GenBank:WP_000535396.1;Name=WP_000535396.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=CCO53_RS05275;product=dTMP kinase;protein_id=WP_000535396.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 302718 303740 . - . ID=gene-CCO53_RS05280;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=CCO53_RS05280;old_locus_tag=CCO53_05270 NZ_NPLZ01000002.1 Protein Homology CDS 302718 303740 . - 0 ID=cds-WP_000736459.1;Parent=gene-CCO53_RS05280;Dbxref=GenBank:WP_000736459.1;Name=WP_000736459.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=CCO53_RS05280;product=cell division protein YceG;protein_id=WP_000736459.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 303743 304552 . - . ID=gene-CCO53_RS05285;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=CCO53_RS05285;old_locus_tag=CCO53_05275 NZ_NPLZ01000002.1 Protein Homology CDS 303743 304552 . - 0 ID=cds-WP_000478660.1;Parent=gene-CCO53_RS05285;Dbxref=GenBank:WP_000478660.1;Name=WP_000478660.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=CCO53_RS05285;product=aminodeoxychorismate lyase;protein_id=WP_000478660.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 304676 305917 . - . ID=gene-CCO53_RS05290;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CCO53_RS05290;old_locus_tag=CCO53_05280 NZ_NPLZ01000002.1 Protein Homology CDS 304676 305917 . - 0 ID=cds-WP_094887589.1;Parent=gene-CCO53_RS05290;Dbxref=GenBank:WP_094887589.1;Name=WP_094887589.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=CCO53_RS05290;product=beta-ketoacyl-ACP synthase II;protein_id=WP_094887589.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 306003 306239 . - . ID=gene-CCO53_RS05295;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=CCO53_RS05295;old_locus_tag=CCO53_05285 NZ_NPLZ01000002.1 Protein Homology CDS 306003 306239 . - 0 ID=cds-WP_000103754.1;Parent=gene-CCO53_RS05295;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=CCO53_RS05295;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 306395 307129 . - . ID=gene-CCO53_RS05300;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CCO53_RS05300;old_locus_tag=CCO53_05290 NZ_NPLZ01000002.1 Protein Homology CDS 306395 307129 . - 0 ID=cds-WP_000007236.1;Parent=gene-CCO53_RS05300;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=CCO53_RS05300;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 307142 308071 . - . ID=gene-CCO53_RS05305;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CCO53_RS05305;old_locus_tag=CCO53_05295 NZ_NPLZ01000002.1 Protein Homology CDS 307142 308071 . - 0 ID=cds-WP_080160468.1;Parent=gene-CCO53_RS05305;Dbxref=GenBank:WP_080160468.1;Name=WP_080160468.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=CCO53_RS05305;product=ACP S-malonyltransferase;protein_id=WP_080160468.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 308087 309040 . - . ID=gene-CCO53_RS05310;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=CCO53_RS05310;old_locus_tag=CCO53_05300 NZ_NPLZ01000002.1 Protein Homology CDS 308087 309040 . - 0 ID=cds-WP_000288148.1;Parent=gene-CCO53_RS05310;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=CCO53_RS05310;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 309120 310199 . - . ID=gene-CCO53_RS05315;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CCO53_RS05315;old_locus_tag=CCO53_05305 NZ_NPLZ01000002.1 Protein Homology CDS 309120 310199 . - 0 ID=cds-WP_001518286.1;Parent=gene-CCO53_RS05315;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=CCO53_RS05315;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 310333 310506 . - . ID=gene-CCO53_RS05320;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CCO53_RS05320;old_locus_tag=CCO53_05310 NZ_NPLZ01000002.1 Protein Homology CDS 310333 310506 . - 0 ID=cds-WP_000290727.1;Parent=gene-CCO53_RS05320;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=CCO53_RS05320;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 310558 311079 . - . ID=gene-CCO53_RS05325;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=CCO53_RS05325;old_locus_tag=CCO53_05315 NZ_NPLZ01000002.1 Protein Homology CDS 310558 311079 . - 0 ID=cds-WP_001174492.1;Parent=gene-CCO53_RS05325;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=CCO53_RS05325;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 311277 311861 . + . ID=gene-CCO53_RS05330;Name=CCO53_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05330;old_locus_tag=CCO53_05320 NZ_NPLZ01000002.1 Protein Homology CDS 311277 311861 . + 0 ID=cds-WP_094887590.1;Parent=gene-CCO53_RS05330;Dbxref=GenBank:WP_094887590.1;Name=WP_094887590.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003836743.1;locus_tag=CCO53_RS05330;product=Maf family protein;protein_id=WP_094887590.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 311944 312903 . - . ID=gene-CCO53_RS05335;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=CCO53_RS05335;old_locus_tag=CCO53_05325 NZ_NPLZ01000002.1 Protein Homology CDS 311944 312903 . - 0 ID=cds-WP_023213203.1;Parent=gene-CCO53_RS05335;Dbxref=GenBank:WP_023213203.1;Name=WP_023213203.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846318.1;locus_tag=CCO53_RS05335;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_023213203.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 313477 316680 . + . ID=gene-CCO53_RS05345;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=CCO53_RS05345;old_locus_tag=CCO53_05335 NZ_NPLZ01000002.1 Protein Homology CDS 313477 316680 . + 0 ID=cds-WP_076726394.1;Parent=gene-CCO53_RS05345;Dbxref=GenBank:WP_076726394.1;Name=WP_076726394.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=CCO53_RS05345;product=ribonuclease E;protein_id=WP_076726394.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 316933 317886 . - . ID=gene-CCO53_RS05355;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=CCO53_RS05355;old_locus_tag=CCO53_05345 NZ_NPLZ01000002.1 Protein Homology CDS 316933 317886 . - 0 ID=cds-WP_058331241.1;Parent=gene-CCO53_RS05355;Dbxref=GenBank:WP_058331241.1;Name=WP_058331241.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=CCO53_RS05355;product=flagellar hook-associated protein FlgL;protein_id=WP_058331241.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 317901 319562 . - . ID=gene-CCO53_RS05360;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=CCO53_RS05360;old_locus_tag=CCO53_05350 NZ_NPLZ01000002.1 Protein Homology CDS 317901 319562 . - 0 ID=cds-WP_000096425.1;Parent=gene-CCO53_RS05360;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=CCO53_RS05360;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 319627 320577 . - . ID=gene-CCO53_RS05365;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=CCO53_RS05365;old_locus_tag=CCO53_05355 NZ_NPLZ01000002.1 Protein Homology CDS 319627 320577 . - 0 ID=cds-WP_000578692.1;Parent=gene-CCO53_RS05365;Dbxref=GenBank:WP_000578692.1;Name=WP_000578692.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=CCO53_RS05365;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578692.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 320577 321674 . - . ID=gene-CCO53_RS05370;Name=CCO53_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05370;old_locus_tag=CCO53_05360 NZ_NPLZ01000002.1 Protein Homology CDS 320577 321674 . - 0 ID=cds-WP_001518955.1;Parent=gene-CCO53_RS05370;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=CCO53_RS05370;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 321686 322384 . - . ID=gene-CCO53_RS05375;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=CCO53_RS05375;old_locus_tag=CCO53_05365 NZ_NPLZ01000002.1 Protein Homology CDS 321686 322384 . - 0 ID=cds-WP_001174897.1;Parent=gene-CCO53_RS05375;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=CCO53_RS05375;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 322438 323220 . - . ID=gene-CCO53_RS05380;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=CCO53_RS05380;old_locus_tag=CCO53_05370 NZ_NPLZ01000002.1 Protein Homology CDS 322438 323220 . - 0 ID=cds-WP_000625851.1;Parent=gene-CCO53_RS05380;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=CCO53_RS05380;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 323234 323989 . - . ID=gene-CCO53_RS05385;Name=CCO53_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05385;old_locus_tag=CCO53_05375 NZ_NPLZ01000002.1 Protein Homology CDS 323234 323989 . - 0 ID=cds-WP_000349278.1;Parent=gene-CCO53_RS05385;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=CCO53_RS05385;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 324010 325221 . - . ID=gene-CCO53_RS05390;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=CCO53_RS05390;old_locus_tag=CCO53_05380 NZ_NPLZ01000002.1 Protein Homology CDS 324010 325221 . - 0 ID=cds-WP_000010567.1;Parent=gene-CCO53_RS05390;Dbxref=GenBank:WP_000010567.1;Name=WP_000010567.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=CCO53_RS05390;product=flagellar hook protein FlgE;protein_id=WP_000010567.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 325248 325946 . - . ID=gene-CCO53_RS05395;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=CCO53_RS05395;old_locus_tag=CCO53_05385 NZ_NPLZ01000002.1 Protein Homology CDS 325248 325946 . - 0 ID=cds-WP_000020450.1;Parent=gene-CCO53_RS05395;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=CCO53_RS05395;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 325958 326362 . - . ID=gene-CCO53_RS05400;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=CCO53_RS05400;old_locus_tag=CCO53_05390 NZ_NPLZ01000002.1 Protein Homology CDS 325958 326362 . - 0 ID=cds-WP_001196448.1;Parent=gene-CCO53_RS05400;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=CCO53_RS05400;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 326366 326782 . - . ID=gene-CCO53_RS05405;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=CCO53_RS05405;old_locus_tag=CCO53_05395 NZ_NPLZ01000002.1 Protein Homology CDS 326366 326782 . - 0 ID=cds-WP_000887043.1;Parent=gene-CCO53_RS05405;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=CCO53_RS05405;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 326939 327598 . + . ID=gene-CCO53_RS05415;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=CCO53_RS05415;old_locus_tag=CCO53_05405 NZ_NPLZ01000002.1 Protein Homology CDS 326939 327598 . + 0 ID=cds-WP_058331243.1;Parent=gene-CCO53_RS05415;Dbxref=GenBank:WP_058331243.1;Name=WP_058331243.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=CCO53_RS05415;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_058331243.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 327690 327983 . + . ID=gene-CCO53_RS05420;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=CCO53_RS05420;old_locus_tag=CCO53_05410 NZ_NPLZ01000002.1 Protein Homology CDS 327690 327983 . + 0 ID=cds-WP_000020893.1;Parent=gene-CCO53_RS05420;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=CCO53_RS05420;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 327988 328410 . + . ID=gene-CCO53_RS05425;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=CCO53_RS05425;old_locus_tag=CCO53_05415 NZ_NPLZ01000002.1 Protein Homology CDS 327988 328410 . + 0 ID=cds-WP_000197547.1;Parent=gene-CCO53_RS05425;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=CCO53_RS05425;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 328492 330027 . - . ID=gene-CCO53_RS05430;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=CCO53_RS05430;old_locus_tag=CCO53_05420 NZ_NPLZ01000002.1 Protein Homology CDS 328492 330027 . - 0 ID=cds-WP_001537775.1;Parent=gene-CCO53_RS05430;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=CCO53_RS05430;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 330331 331254 . - . ID=gene-CCO53_RS05435;Name=CCO53_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05435;old_locus_tag=CCO53_05425 NZ_NPLZ01000002.1 Protein Homology CDS 330331 331254 . - 0 ID=cds-WP_094887591.1;Parent=gene-CCO53_RS05435;Dbxref=GenBank:WP_094887591.1;Name=WP_094887591.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=CCO53_RS05435;product=Gfo/Idh/MocA family protein;protein_id=WP_094887591.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 331256 331903 . - . ID=gene-CCO53_RS05440;Name=CCO53_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05440;old_locus_tag=CCO53_05430 NZ_NPLZ01000002.1 Protein Homology CDS 331256 331903 . - 0 ID=cds-WP_058331244.1;Parent=gene-CCO53_RS05440;Dbxref=GenBank:WP_058331244.1;Name=WP_058331244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=CCO53_RS05440;product=YceH family protein;protein_id=WP_058331244.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 331939 332523 . - . ID=gene-CCO53_RS05445;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=CCO53_RS05445;old_locus_tag=CCO53_05435 NZ_NPLZ01000002.1 Protein Homology CDS 331939 332523 . - 0 ID=cds-WP_000468204.1;Parent=gene-CCO53_RS05445;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=CCO53_RS05445;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 332760 333968 . + . ID=gene-CCO53_RS05450;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=CCO53_RS05450;old_locus_tag=CCO53_05440 NZ_NPLZ01000002.1 Protein Homology CDS 332760 333968 . + 0 ID=cds-WP_000092174.1;Parent=gene-CCO53_RS05450;Dbxref=GenBank:WP_000092174.1;Name=WP_000092174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=CCO53_RS05450;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092174.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 334032 334679 . + . ID=gene-CCO53_RS05455;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=CCO53_RS05455;old_locus_tag=CCO53_05445 NZ_NPLZ01000002.1 Protein Homology CDS 334032 334679 . + 0 ID=cds-WP_000780893.1;Parent=gene-CCO53_RS05455;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=CCO53_RS05455;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 334804 335364 . + . ID=gene-CCO53_RS05460;Name=CCO53_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05460;old_locus_tag=CCO53_05450 NZ_NPLZ01000002.1 Protein Homology CDS 334804 335364 . + 0 ID=cds-WP_000713057.1;Parent=gene-CCO53_RS05460;Dbxref=GenBank:WP_000713057.1;Name=WP_000713057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=CCO53_RS05460;product=lipoprotein;protein_id=WP_000713057.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 335468 336514 . + . ID=gene-CCO53_RS05465;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CCO53_RS05465;old_locus_tag=CCO53_05455 NZ_NPLZ01000002.1 Protein Homology CDS 335468 336514 . + 0 ID=cds-WP_031605446.1;Parent=gene-CCO53_RS05465;Dbxref=GenBank:WP_031605446.1;Name=WP_031605446.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=CCO53_RS05465;product=dihydroorotase;protein_id=WP_031605446.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 336587 336832 . + . ID=gene-CCO53_RS05470;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=CCO53_RS05470;old_locus_tag=CCO53_05460 NZ_NPLZ01000002.1 Protein Homology CDS 336587 336832 . + 0 ID=cds-WP_001217763.1;Parent=gene-CCO53_RS05470;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=CCO53_RS05470;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 337122 337376 . + . ID=gene-CCO53_RS05475;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=CCO53_RS05475;old_locus_tag=CCO53_05465 NZ_NPLZ01000002.1 Protein Homology CDS 337122 337376 . + 0 ID=cds-WP_000414441.1;Parent=gene-CCO53_RS05475;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=CCO53_RS05475;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 337489 338607 . + . ID=gene-CCO53_RS05480;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=CCO53_RS05480;old_locus_tag=CCO53_05470 NZ_NPLZ01000002.1 Protein Homology CDS 337489 338607 . + 0 ID=cds-WP_080160466.1;Parent=gene-CCO53_RS05480;Dbxref=GenBank:WP_080160466.1;Name=WP_080160466.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=CCO53_RS05480;product=N-methyl-L-tryptophan oxidase;protein_id=WP_080160466.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 338648 338761 . + . ID=gene-CCO53_RS05485;Name=CCO53_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05485;old_locus_tag=CCO53_05475 NZ_NPLZ01000002.1 Protein Homology CDS 338648 338761 . + 0 ID=cds-WP_001253282.1;Parent=gene-CCO53_RS05485;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=CCO53_RS05485;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 339024 339596 . + . ID=gene-CCO53_RS05495;Name=CCO53_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05495;old_locus_tag=CCO53_05485 NZ_NPLZ01000002.1 Protein Homology CDS 339024 339596 . + 0 ID=cds-WP_001159791.1;Parent=gene-CCO53_RS05495;Dbxref=GenBank:WP_001159791.1;Name=WP_001159791.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=CCO53_RS05495;product=cytochrome b;protein_id=WP_001159791.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 339593 340168 . + . ID=gene-CCO53_RS05500;Name=CCO53_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05500;old_locus_tag=CCO53_05490 NZ_NPLZ01000002.1 Protein Homology CDS 339593 340168 . + 0 ID=cds-WP_000739886.1;Parent=gene-CCO53_RS05500;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=CCO53_RS05500;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 340220 341272 . - . ID=gene-CCO53_RS05505;Name=CCO53_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05505;old_locus_tag=CCO53_05495 NZ_NPLZ01000002.1 Protein Homology CDS 340220 341272 . - 0 ID=cds-WP_001144623.1;Parent=gene-CCO53_RS05505;Dbxref=GenBank:WP_001144623.1;Name=WP_001144623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=CCO53_RS05505;product=rhodanese-related sulfurtransferase;protein_id=WP_001144623.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 341492 342412 . + . ID=gene-CCO53_RS05510;Name=CCO53_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05510;old_locus_tag=CCO53_05500 NZ_NPLZ01000002.1 Protein Homology CDS 341492 342412 . + 0 ID=cds-WP_000163972.1;Parent=gene-CCO53_RS05510;Dbxref=GenBank:WP_000163972.1;Name=WP_000163972.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=CCO53_RS05510;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163972.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 342567 343781 . + . ID=gene-CCO53_RS05520;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=CCO53_RS05520;old_locus_tag=CCO53_05510 NZ_NPLZ01000002.1 Protein Homology CDS 342567 343781 . + 0 ID=cds-WP_023219175.1;Parent=gene-CCO53_RS05520;Dbxref=GenBank:WP_023219175.1;Name=WP_023219175.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=CCO53_RS05520;product=multidrug efflux MFS transporter MdtG;protein_id=WP_023219175.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 343863 344237 . + . ID=gene-CCO53_RS05525;Name=CCO53_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05525;old_locus_tag=CCO53_05515 NZ_NPLZ01000002.1 Protein Homology CDS 343863 344237 . + 0 ID=cds-WP_001534912.1;Parent=gene-CCO53_RS05525;Dbxref=GenBank:WP_001534912.1;Name=WP_001534912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=CCO53_RS05525;product=MysB family protein;protein_id=WP_001534912.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 344238 344465 . - . ID=gene-CCO53_RS05530;Name=CCO53_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05530;old_locus_tag=CCO53_05520 NZ_NPLZ01000002.1 Protein Homology CDS 344238 344465 . - 0 ID=cds-WP_001217832.1;Parent=gene-CCO53_RS05530;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=CCO53_RS05530;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 344531 347074 . - . ID=gene-CCO53_RS05535;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=CCO53_RS05535;old_locus_tag=CCO53_05525 NZ_NPLZ01000002.1 Protein Homology CDS 344531 347074 . - 0 ID=cds-WP_001044609.1;Parent=gene-CCO53_RS05535;Dbxref=GenBank:WP_001044609.1;Name=WP_001044609.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=CCO53_RS05535;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044609.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 347067 348602 . - . ID=gene-CCO53_RS05540;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=CCO53_RS05540;old_locus_tag=CCO53_05530 NZ_NPLZ01000002.1 Protein Homology CDS 347067 348602 . - 0 ID=cds-WP_001562609.1;Parent=gene-CCO53_RS05540;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=CCO53_RS05540;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 348874 350028 . + . ID=gene-CCO53_RS05545;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=CCO53_RS05545;old_locus_tag=CCO53_05535 NZ_NPLZ01000002.1 Protein Homology CDS 348874 350028 . + 0 ID=cds-WP_020898666.1;Parent=gene-CCO53_RS05545;Dbxref=GenBank:WP_020898666.1;Name=WP_020898666.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=CCO53_RS05545;product=glucans biosynthesis protein MdoC;protein_id=WP_020898666.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 350045 351532 . - . ID=gene-CCO53_RS05550;Name=CCO53_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05550;old_locus_tag=CCO53_05540 NZ_NPLZ01000002.1 Protein Homology CDS 350045 351532 . - 0 ID=cds-WP_000976323.1;Parent=gene-CCO53_RS05550;Dbxref=GenBank:WP_000976323.1;Name=WP_000976323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=CCO53_RS05550;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 351468 352007 . - . ID=gene-CCO53_RS05555;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=CCO53_RS05555;old_locus_tag=CCO53_05545 NZ_NPLZ01000002.1 Protein Homology CDS 351468 352007 . - 0 ID=cds-WP_000203944.1;Parent=gene-CCO53_RS05555;Dbxref=GenBank:WP_000203944.1;Name=WP_000203944.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=CCO53_RS05555;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203944.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 352097 352417 . - . ID=gene-CCO53_RS05560;Name=CCO53_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05560;old_locus_tag=CCO53_05550 NZ_NPLZ01000002.1 Protein Homology CDS 352097 352417 . - 0 ID=cds-WP_000111257.1;Parent=gene-CCO53_RS05560;Dbxref=GenBank:WP_000111257.1;Name=WP_000111257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=CCO53_RS05560;product=type 1 fimbrial protein;protein_id=WP_000111257.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 352548 352874 . - . ID=gene-CCO53_RS05565;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=CCO53_RS05565;old_locus_tag=CCO53_05555 NZ_NPLZ01000002.1 Protein Homology CDS 352548 352874 . - 0 ID=cds-WP_000557256.1;Parent=gene-CCO53_RS05565;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=CCO53_RS05565;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 352936 353391 . - . ID=gene-CCO53_RS05570;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=CCO53_RS05570;old_locus_tag=CCO53_05560 NZ_NPLZ01000002.1 Protein Homology CDS 352936 353391 . - 0 ID=cds-WP_000771416.1;Parent=gene-CCO53_RS05570;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=CCO53_RS05570;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 353433 353888 . - . ID=gene-CCO53_RS05575;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=CCO53_RS05575;old_locus_tag=CCO53_05565 NZ_NPLZ01000002.1 Protein Homology CDS 353433 353888 . - 0 ID=cds-WP_000791655.1;Parent=gene-CCO53_RS05575;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=CCO53_RS05575;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 354643 355293 . + . ID=gene-CCO53_RS05585;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=CCO53_RS05585;old_locus_tag=CCO53_05575 NZ_NPLZ01000002.1 Protein Homology CDS 354643 355293 . + 0 ID=cds-WP_000481517.1;Parent=gene-CCO53_RS05585;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=CCO53_RS05585;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 355298 355693 . + . ID=gene-CCO53_RS05590;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=CCO53_RS05590;old_locus_tag=CCO53_05580 NZ_NPLZ01000002.1 Protein Homology CDS 355298 355693 . + 0 ID=cds-WP_000833307.1;Parent=gene-CCO53_RS05590;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=CCO53_RS05590;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 355720 356136 . + . ID=gene-CCO53_RS05595;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=CCO53_RS05595;old_locus_tag=CCO53_05585 NZ_NPLZ01000002.1 Protein Homology CDS 355720 356136 . + 0 ID=cds-WP_001264073.1;Parent=gene-CCO53_RS05595;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=CCO53_RS05595;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 356163 356996 . + . ID=gene-CCO53_RS05600;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=CCO53_RS05600;old_locus_tag=CCO53_05590 NZ_NPLZ01000002.1 Protein Homology CDS 356163 356996 . + 0 ID=cds-WP_001137620.1;Parent=gene-CCO53_RS05600;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=CCO53_RS05600;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 357035 357517 . - . ID=gene-CCO53_RS05605;Name=CCO53_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05605;old_locus_tag=CCO53_05595 NZ_NPLZ01000002.1 Protein Homology CDS 357035 357517 . - 0 ID=cds-WP_001546652.1;Parent=gene-CCO53_RS05605;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=CCO53_RS05605;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 357618 358172 . - . ID=gene-CCO53_RS05610;Name=CCO53_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05610;old_locus_tag=CCO53_05600 NZ_NPLZ01000002.1 Protein Homology CDS 357618 358172 . - 0 ID=cds-WP_094887592.1;Parent=gene-CCO53_RS05610;Dbxref=GenBank:WP_094887592.1;Name=WP_094887592.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=CCO53_RS05610;product=TorD/DmsD family molecular chaperone;protein_id=WP_094887592.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 358196 358933 . - . ID=gene-CCO53_RS05615;Name=CCO53_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05615;old_locus_tag=CCO53_05605 NZ_NPLZ01000002.1 Protein Homology CDS 358196 358933 . - 0 ID=cds-WP_094887593.1;Parent=gene-CCO53_RS05615;Dbxref=GenBank:WP_094887593.1;Name=WP_094887593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=CCO53_RS05615;product=phosphatase;protein_id=WP_094887593.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 359018 359956 . - . ID=gene-CCO53_RS05620;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=CCO53_RS05620;old_locus_tag=CCO53_05610 NZ_NPLZ01000002.1 Protein Homology CDS 359018 359956 . - 0 ID=cds-WP_094887594.1;Parent=gene-CCO53_RS05620;Dbxref=GenBank:WP_094887594.1;Name=WP_094887594.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=CCO53_RS05620;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_094887594.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 360192 360279 . + . ID=gene-CCO53_RS05630;Name=CCO53_RS05630;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS05630;old_locus_tag=CCO53_05620 NZ_NPLZ01000002.1 tRNAscan-SE tRNA 360192 360279 . + . ID=rna-CCO53_RS05630;Parent=gene-CCO53_RS05630;anticodon=(pos:360226..360228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS05630;product=tRNA-Ser NZ_NPLZ01000002.1 tRNAscan-SE exon 360192 360279 . + . ID=exon-CCO53_RS05630-1;Parent=rna-CCO53_RS05630;anticodon=(pos:360226..360228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS05630;product=tRNA-Ser NZ_NPLZ01000002.1 RefSeq gene 360328 360463 . + . ID=gene-CCO53_RS05635;Name=CCO53_RS05635;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO53_RS05635;old_locus_tag=CCO53_05625 NZ_NPLZ01000002.1 cmsearch ncRNA 360328 360463 . + . ID=rna-CCO53_RS05635;Parent=gene-CCO53_RS05635;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS05635;product=RtT sRNA NZ_NPLZ01000002.1 cmsearch exon 360328 360463 . + . ID=exon-CCO53_RS05635-1;Parent=rna-CCO53_RS05635;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS05635;product=RtT sRNA NZ_NPLZ01000002.1 RefSeq gene 360615 361721 . - . ID=gene-CCO53_RS05640;Name=CCO53_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05640;old_locus_tag=CCO53_05630 NZ_NPLZ01000002.1 Protein Homology CDS 360615 361721 . - 0 ID=cds-WP_000988594.1;Parent=gene-CCO53_RS05640;Dbxref=GenBank:WP_000988594.1;Name=WP_000988594.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=CCO53_RS05640;product=Gfo/Idh/MocA family protein;protein_id=WP_000988594.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 361732 363012 . - . ID=gene-CCO53_RS05645;Name=CCO53_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05645;old_locus_tag=CCO53_05635 NZ_NPLZ01000002.1 Protein Homology CDS 361732 363012 . - 0 ID=cds-WP_000560758.1;Parent=gene-CCO53_RS05645;Dbxref=GenBank:WP_000560758.1;Name=WP_000560758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=CCO53_RS05645;product=MFS transporter;protein_id=WP_000560758.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 363295 363987 . - . ID=gene-CCO53_RS05650;Name=CCO53_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05650;old_locus_tag=CCO53_05640 NZ_NPLZ01000002.1 Protein Homology CDS 363295 363987 . - 0 ID=cds-WP_058331353.1;Parent=gene-CCO53_RS05650;Dbxref=GenBank:WP_058331353.1;Name=WP_058331353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=CCO53_RS05650;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_058331353.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 364033 365193 . - . ID=gene-CCO53_RS05655;Name=CCO53_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05655;old_locus_tag=CCO53_05645 NZ_NPLZ01000002.1 Protein Homology CDS 364033 365193 . - 0 ID=cds-WP_000525756.1;Parent=gene-CCO53_RS05655;Dbxref=GenBank:WP_000525756.1;Name=WP_000525756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=CCO53_RS05655;product=N-acetylneuraminate epimerase;protein_id=WP_000525756.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 365699 366379 . + . ID=gene-CCO53_RS05660;Name=CCO53_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05660;old_locus_tag=CCO53_05650 NZ_NPLZ01000002.1 Protein Homology CDS 365699 366379 . + 0 ID=cds-WP_000054244.1;Parent=gene-CCO53_RS05660;Dbxref=GenBank:WP_000054244.1;Name=WP_000054244.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=CCO53_RS05660;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054244.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 366716 368212 . + . ID=gene-CCO53_RS05670;Name=CCO53_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05670;old_locus_tag=CCO53_05660 NZ_NPLZ01000002.1 Protein Homology CDS 366716 368212 . + 0 ID=cds-WP_094887595.1;Parent=gene-CCO53_RS05670;Dbxref=GenBank:WP_094887595.1;Name=WP_094887595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=CCO53_RS05670;product=sodium:solute symporter;protein_id=WP_094887595.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 368498 369379 . + . ID=gene-CCO53_RS05675;Name=CCO53_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05675;old_locus_tag=CCO53_05665 NZ_NPLZ01000002.1 Protein Homology CDS 368498 369379 . + 0 ID=cds-WP_000433673.1;Parent=gene-CCO53_RS05675;Dbxref=GenBank:WP_000433673.1;Name=WP_000433673.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=CCO53_RS05675;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433673.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 369484 370272 . - . ID=gene-CCO53_RS05680;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=CCO53_RS05680;old_locus_tag=CCO53_05670 NZ_NPLZ01000002.1 Protein Homology CDS 369484 370272 . - 0 ID=cds-WP_000533527.1;Parent=gene-CCO53_RS05680;Dbxref=GenBank:WP_000533527.1;Name=WP_000533527.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=CCO53_RS05680;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533527.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 370965 373241 . + . ID=gene-CCO53_RS05690;Name=CCO53_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05690;old_locus_tag=CCO53_05680 NZ_NPLZ01000002.1 Protein Homology CDS 370965 373241 . + 0 ID=cds-WP_078057654.1;Parent=gene-CCO53_RS05690;Dbxref=GenBank:WP_078057654.1;Name=WP_078057654.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: protein motif:HMM:NF025849.6;locus_tag=CCO53_RS05690;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WP_078057654.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 373366 373557 . + . ID=gene-CCO53_RS05695;Name=CCO53_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05695;old_locus_tag=CCO53_05685 NZ_NPLZ01000002.1 Protein Homology CDS 373366 373557 . + 0 ID=cds-WP_078057653.1;Parent=gene-CCO53_RS05695;Dbxref=GenBank:WP_078057653.1;Name=WP_078057653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023884.6;locus_tag=CCO53_RS05695;product=leucine-rich repeat domain-containing protein;protein_id=WP_078057653.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 373760 375268 . - . ID=gene-CCO53_RS05700;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CCO53_RS05700;old_locus_tag=CCO53_05690 NZ_NPLZ01000002.1 Protein Homology CDS 373760 375268 . - 0 ID=cds-WP_001018463.1;Parent=gene-CCO53_RS05700;Dbxref=GenBank:WP_001018463.1;Name=WP_001018463.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=CCO53_RS05700;product=sodium/proline symporter PutP;protein_id=WP_001018463.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 375689 379651 . + . ID=gene-CCO53_RS05705;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=CCO53_RS05705;old_locus_tag=CCO53_05695 NZ_NPLZ01000002.1 Protein Homology CDS 375689 379651 . + 0 ID=cds-WP_080183505.1;Parent=gene-CCO53_RS05705;Dbxref=GenBank:WP_080183505.1;Name=WP_080183505.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=CCO53_RS05705;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_080183505.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 379710 380105 . + . ID=gene-CCO53_RS05710;Name=CCO53_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05710;old_locus_tag=CCO53_05700 NZ_NPLZ01000002.1 Protein Homology CDS 379710 380105 . + 0 ID=cds-WP_000821059.1;Parent=gene-CCO53_RS05710;Dbxref=GenBank:WP_000821059.1;Name=WP_000821059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=CCO53_RS05710;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821059.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 380102 380740 . - . ID=gene-CCO53_RS05715;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=CCO53_RS05715;old_locus_tag=CCO53_05705 NZ_NPLZ01000002.1 Protein Homology CDS 380102 380740 . - 0 ID=cds-WP_023201794.1;Parent=gene-CCO53_RS05715;Dbxref=GenBank:WP_023201794.1;Name=WP_023201794.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=CCO53_RS05715;product=HTH-type transcriptional regulator RutR;protein_id=WP_023201794.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 380877 381044 . - . ID=gene-CCO53_RS05720;Name=CCO53_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05720;old_locus_tag=CCO53_05710 NZ_NPLZ01000002.1 Protein Homology CDS 380877 381044 . - 0 ID=cds-WP_001273663.1;Parent=gene-CCO53_RS05720;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=CCO53_RS05720;product=general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 381429 382025 . + . ID=gene-CCO53_RS05725;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=CCO53_RS05725;old_locus_tag=CCO53_05715 NZ_NPLZ01000002.1 Protein Homology CDS 381429 382025 . + 0 ID=cds-WP_001062898.1;Parent=gene-CCO53_RS05725;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=CCO53_RS05725;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 382046 382273 . + . ID=gene-CCO53_RS05730;Name=CCO53_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05730;old_locus_tag=CCO53_05720 NZ_NPLZ01000002.1 Protein Homology CDS 382046 382273 . + 0 ID=cds-WP_001143125.1;Parent=gene-CCO53_RS05730;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=CCO53_RS05730;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 382307 383548 . - . ID=gene-CCO53_RS05735;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=CCO53_RS05735;old_locus_tag=CCO53_05725 NZ_NPLZ01000002.1 Protein Homology CDS 382307 383548 . - 0 ID=cds-WP_000749201.1;Parent=gene-CCO53_RS05735;Dbxref=GenBank:WP_000749201.1;Name=WP_000749201.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=CCO53_RS05735;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000749201.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 383681 384187 . - . ID=gene-CCO53_RS05740;Name=CCO53_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05740;old_locus_tag=CCO53_05730 NZ_NPLZ01000002.1 Protein Homology CDS 383681 384187 . - 0 ID=cds-WP_023201793.1;Parent=gene-CCO53_RS05740;Dbxref=GenBank:WP_023201793.1;Name=WP_023201793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=CCO53_RS05740;product=protein disulfide oxidoreductase;protein_id=WP_023201793.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 384177 384800 . - . ID=gene-CCO53_RS05745;Name=CCO53_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05745;old_locus_tag=CCO53_05735 NZ_NPLZ01000002.1 Protein Homology CDS 384177 384800 . - 0 ID=cds-WP_023201792.1;Parent=gene-CCO53_RS05745;Dbxref=GenBank:WP_023201792.1;Name=WP_023201792.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=CCO53_RS05745;product=DsbA family protein;protein_id=WP_023201792.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 384797 386683 . - . ID=gene-CCO53_RS05750;Name=CCO53_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05750;old_locus_tag=CCO53_05740 NZ_NPLZ01000002.1 Protein Homology CDS 384797 386683 . - 0 ID=cds-WP_023201791.1;Parent=gene-CCO53_RS05750;Dbxref=GenBank:WP_023201791.1;Name=WP_023201791.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=CCO53_RS05750;product=protein-disulfide reductase DsbD family protein;protein_id=WP_023201791.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 386732 387094 . - . ID=gene-CCO53_RS05755;Name=CCO53_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05755;old_locus_tag=CCO53_05745 NZ_NPLZ01000002.1 Protein Homology CDS 386732 387094 . - 0 ID=cds-WP_001118902.1;Parent=gene-CCO53_RS05755;Dbxref=GenBank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=CCO53_RS05755;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 387329 388249 . + . ID=gene-CCO53_RS05765;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=CCO53_RS05765;old_locus_tag=CCO53_05755 NZ_NPLZ01000002.1 Protein Homology CDS 387329 388249 . + 0 ID=cds-WP_023198956.1;Parent=gene-CCO53_RS05765;Dbxref=GenBank:WP_023198956.1;Name=WP_023198956.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=CCO53_RS05765;product=curved DNA-binding protein;protein_id=WP_023198956.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 388249 388554 . + . ID=gene-CCO53_RS05770;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=CCO53_RS05770;old_locus_tag=CCO53_05760 NZ_NPLZ01000002.1 Protein Homology CDS 388249 388554 . + 0 ID=cds-WP_001284251.1;Parent=gene-CCO53_RS05770;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=CCO53_RS05770;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 389208 389570 . + . ID=gene-CCO53_RS05780;Name=CCO53_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05780;old_locus_tag=CCO53_05770 NZ_NPLZ01000002.1 Protein Homology CDS 389208 389570 . + 0 ID=cds-WP_001537781.1;Parent=gene-CCO53_RS05780;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=CCO53_RS05780;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 389978 390916 . - . ID=gene-CCO53_RS05785;Name=CCO53_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05785;old_locus_tag=CCO53_05775 NZ_NPLZ01000002.1 Protein Homology CDS 389978 390916 . - 0 ID=cds-WP_000976561.1;Parent=gene-CCO53_RS05785;Dbxref=GenBank:WP_000976561.1;Name=WP_000976561.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=CCO53_RS05785;product=MBL fold metallo-hydrolase;protein_id=WP_000976561.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 390930 391826 . - . ID=gene-CCO53_RS05790;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=CCO53_RS05790;old_locus_tag=CCO53_05780 NZ_NPLZ01000002.1 Protein Homology CDS 390930 391826 . - 0 ID=cds-WP_000336602.1;Parent=gene-CCO53_RS05790;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=CCO53_RS05790;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 391836 393212 . - . ID=gene-CCO53_RS05795;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=CCO53_RS05795;old_locus_tag=CCO53_05785 NZ_NPLZ01000002.1 Protein Homology CDS 391836 393212 . - 0 ID=cds-WP_001285803.1;Parent=gene-CCO53_RS05795;Dbxref=GenBank:WP_001285803.1;Name=WP_001285803.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=CCO53_RS05795;product=4-hydroxyphenylacetate permease;protein_id=WP_001285803.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 393285 394076 . - . ID=gene-CCO53_RS05800;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=CCO53_RS05800;old_locus_tag=CCO53_05790 NZ_NPLZ01000002.1 Protein Homology CDS 393285 394076 . - 0 ID=cds-WP_023216405.1;Parent=gene-CCO53_RS05800;Dbxref=GenBank:WP_023216405.1;Name=WP_023216405.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=CCO53_RS05800;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_023216405.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 394087 394890 . - . ID=gene-CCO53_RS05805;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=CCO53_RS05805;old_locus_tag=CCO53_05795 NZ_NPLZ01000002.1 Protein Homology CDS 394087 394890 . - 0 ID=cds-WP_000884795.1;Parent=gene-CCO53_RS05805;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=CCO53_RS05805;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 395034 395414 . - . ID=gene-CCO53_RS05815;Name=CCO53_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05815;old_locus_tag=CCO53_05805 NZ_NPLZ01000002.1 Protein Homology CDS 395034 395414 . - 0 ID=cds-WP_001119852.1;Parent=gene-CCO53_RS05815;Dbxref=GenBank:WP_001119852.1;Name=WP_001119852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=CCO53_RS05815;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119852.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 395424 396275 . - . ID=gene-CCO53_RS05820;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=CCO53_RS05820;old_locus_tag=CCO53_05810 NZ_NPLZ01000002.1 Protein Homology CDS 395424 396275 . - 0 ID=cds-WP_000516978.1;Parent=gene-CCO53_RS05820;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=CCO53_RS05820;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 396277 397743 . - . ID=gene-CCO53_RS05825;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=CCO53_RS05825;old_locus_tag=CCO53_05815 NZ_NPLZ01000002.1 Protein Homology CDS 396277 397743 . - 0 ID=cds-WP_000723524.1;Parent=gene-CCO53_RS05825;Dbxref=GenBank:WP_000723524.1;Name=WP_000723524.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=CCO53_RS05825;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723524.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 397740 399029 . - . ID=gene-CCO53_RS05830;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=CCO53_RS05830;old_locus_tag=CCO53_05820 NZ_NPLZ01000002.1 Protein Homology CDS 397740 399029 . - 0 ID=cds-WP_000679210.1;Parent=gene-CCO53_RS05830;Dbxref=GenBank:WP_000679210.1;Name=WP_000679210.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=CCO53_RS05830;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679210.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 399304 399744 . + . ID=gene-CCO53_RS05835;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=CCO53_RS05835;old_locus_tag=CCO53_05825 NZ_NPLZ01000002.1 Protein Homology CDS 399304 399744 . + 0 ID=cds-WP_000543922.1;Parent=gene-CCO53_RS05835;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=CCO53_RS05835;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 399962 401524 . + . ID=gene-CCO53_RS05840;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=CCO53_RS05840;old_locus_tag=CCO53_05830 NZ_NPLZ01000002.1 Protein Homology CDS 399962 401524 . + 0 ID=cds-WP_094887596.1;Parent=gene-CCO53_RS05840;Dbxref=GenBank:WP_094887596.1;Name=WP_094887596.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=CCO53_RS05840;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_094887596.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 401542 402054 . + . ID=gene-CCO53_RS05845;Name=CCO53_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05845;old_locus_tag=CCO53_05835 NZ_NPLZ01000002.1 Protein Homology CDS 401542 402054 . + 0 ID=cds-WP_001195556.1;Parent=gene-CCO53_RS05845;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=CCO53_RS05845;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 402387 402797 . - . ID=gene-CCO53_RS05855;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=CCO53_RS05855;old_locus_tag=CCO53_05845 NZ_NPLZ01000002.1 Protein Homology CDS 402387 402797 . - 0 ID=cds-WP_080160301.1;Parent=gene-CCO53_RS05855;Dbxref=GenBank:WP_080160301.1;Name=WP_080160301.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=CCO53_RS05855;product=hydroxyisourate hydrolase;protein_id=WP_080160301.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 402933 403613 . + . ID=gene-CCO53_RS05860;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=CCO53_RS05860;old_locus_tag=CCO53_05850 NZ_NPLZ01000002.1 Protein Homology CDS 402933 403613 . + 0 ID=cds-WP_000698207.1;Parent=gene-CCO53_RS05860;Dbxref=GenBank:WP_000698207.1;Name=WP_000698207.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=CCO53_RS05860;product=response regulator transcription factor HprR;protein_id=WP_000698207.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 403606 404970 . + . ID=gene-CCO53_RS05865;Name=CCO53_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05865;old_locus_tag=CCO53_05855 NZ_NPLZ01000002.1 Protein Homology CDS 403606 404970 . + 0 ID=cds-WP_053299971.1;Parent=gene-CCO53_RS05865;Dbxref=GenBank:WP_053299971.1;Name=WP_053299971.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=CCO53_RS05865;product=heavy metal sensor histidine kinase;protein_id=WP_053299971.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 405143 406612 . + . ID=gene-CCO53_RS05870;Name=CCO53_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05870;old_locus_tag=CCO53_05860 NZ_NPLZ01000002.1 Protein Homology CDS 405143 406612 . + 0 ID=cds-WP_000760235.1;Parent=gene-CCO53_RS05870;Dbxref=GenBank:WP_000760235.1;Name=WP_000760235.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=CCO53_RS05870;product=C69 family dipeptidase;protein_id=WP_000760235.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 406721 406831 . + . ID=gene-CCO53_RS05875;Name=CCO53_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05875;old_locus_tag=CCO53_05865 NZ_NPLZ01000002.1 Protein Homology CDS 406721 406831 . + 0 ID=cds-WP_020898651.1;Parent=gene-CCO53_RS05875;Dbxref=GenBank:WP_020898651.1;Name=WP_020898651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=CCO53_RS05875;product=hypothetical protein;protein_id=WP_020898651.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 406832 407002 . - . ID=gene-CCO53_RS05880;Name=CCO53_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05880;old_locus_tag=CCO53_05870 NZ_NPLZ01000002.1 Protein Homology CDS 406832 407002 . - 0 ID=cds-WP_001111006.1;Parent=gene-CCO53_RS05880;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=CCO53_RS05880;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 407334 409019 . + . ID=gene-CCO53_RS05885;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=CCO53_RS05885;old_locus_tag=CCO53_05875 NZ_NPLZ01000002.1 Protein Homology CDS 407334 409019 . + 0 ID=cds-WP_058331347.1;Parent=gene-CCO53_RS05885;Dbxref=GenBank:WP_058331347.1;Name=WP_058331347.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=CCO53_RS05885;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_058331347.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 409036 409377 . + . ID=gene-CCO53_RS05890;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=CCO53_RS05890;old_locus_tag=CCO53_05880 NZ_NPLZ01000002.1 Protein Homology CDS 409036 409377 . + 0 ID=cds-WP_058331346.1;Parent=gene-CCO53_RS05890;Dbxref=GenBank:WP_058331346.1;Name=WP_058331346.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=CCO53_RS05890;product=type III secretion system chaperone SigE;protein_id=WP_058331346.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 409387 409707 . - . ID=gene-CCO53_RS05895;Name=CCO53_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05895;old_locus_tag=CCO53_05885 NZ_NPLZ01000002.1 Protein Homology CDS 409387 409707 . - 0 ID=cds-WP_094887597.1;Parent=gene-CCO53_RS05895;Dbxref=GenBank:WP_094887597.1;Name=WP_094887597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=CCO53_RS05895;product=hypothetical protein;protein_id=WP_094887597.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 409809 409967 . + . ID=gene-CCO53_RS24330;Name=CCO53_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24330 NZ_NPLZ01000002.1 Protein Homology CDS 409809 409967 . + 0 ID=cds-WP_423825467.1;Parent=gene-CCO53_RS24330;Dbxref=GenBank:WP_423825467.1;Name=WP_423825467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=CCO53_RS24330;product=hypothetical protein;protein_id=WP_423825467.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 410394 412373 . - . ID=gene-CCO53_RS05910;Name=CCO53_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05910;old_locus_tag=CCO53_05900 NZ_NPLZ01000002.1 Protein Homology CDS 410394 412373 . - 0 ID=cds-WP_094887599.1;Parent=gene-CCO53_RS05910;Dbxref=GenBank:WP_094887599.1;Name=WP_094887599.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078314.1;locus_tag=CCO53_RS05910;product=alkyl/aryl-sulfatase;protein_id=WP_094887599.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 412769 413899 . + . ID=gene-CCO53_RS05915;Name=CCO53_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05915;old_locus_tag=CCO53_05905 NZ_NPLZ01000002.1 Protein Homology CDS 412769 413899 . + 0 ID=cds-WP_076726369.1;Parent=gene-CCO53_RS05915;Dbxref=GenBank:WP_076726369.1;Name=WP_076726369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529511.1;locus_tag=CCO53_RS05915;product=GGDEF domain-containing protein;protein_id=WP_076726369.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 414215 414302 . - . ID=gene-CCO53_RS05920;Name=CCO53_RS05920;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS05920;old_locus_tag=CCO53_05910 NZ_NPLZ01000002.1 tRNAscan-SE tRNA 414215 414302 . - . ID=rna-CCO53_RS05920;Parent=gene-CCO53_RS05920;anticodon=(pos:complement(414266..414268));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS05920;product=tRNA-Ser NZ_NPLZ01000002.1 tRNAscan-SE exon 414215 414302 . - . ID=exon-CCO53_RS05920-1;Parent=rna-CCO53_RS05920;anticodon=(pos:complement(414266..414268));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS05920;product=tRNA-Ser NZ_NPLZ01000002.1 RefSeq gene 414697 415356 . + . ID=gene-CCO53_RS05925;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=CCO53_RS05925;old_locus_tag=CCO53_05915 NZ_NPLZ01000002.1 Protein Homology CDS 414697 415356 . + 0 ID=cds-WP_000374046.1;Parent=gene-CCO53_RS05925;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=CCO53_RS05925;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 415443 415772 . + . ID=gene-CCO53_RS05930;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=CCO53_RS05930;old_locus_tag=CCO53_05920 NZ_NPLZ01000002.1 Protein Homology CDS 415443 415772 . + 0 ID=cds-WP_000904449.1;Parent=gene-CCO53_RS05930;Dbxref=GenBank:WP_000904449.1;Name=WP_000904449.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=CCO53_RS05930;product=sulfurtransferase TusE;protein_id=WP_000904449.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 415769 416050 . - . ID=gene-CCO53_RS05935;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=CCO53_RS05935;old_locus_tag=CCO53_05925 NZ_NPLZ01000002.1 Protein Homology CDS 415769 416050 . - 0 ID=cds-WP_000072884.1;Parent=gene-CCO53_RS05935;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=CCO53_RS05935;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 416099 416878 . - . ID=gene-CCO53_RS05940;Name=CCO53_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05940;old_locus_tag=CCO53_05930 NZ_NPLZ01000002.1 Protein Homology CDS 416099 416878 . - 0 ID=cds-WP_000548082.1;Parent=gene-CCO53_RS05940;Dbxref=GenBank:WP_000548082.1;Name=WP_000548082.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=CCO53_RS05940;product=helix-turn-helix transcriptional regulator;protein_id=WP_000548082.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 416904 417452 . - . ID=gene-CCO53_RS05945;Name=CCO53_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05945;old_locus_tag=CCO53_05935 NZ_NPLZ01000002.1 Protein Homology CDS 416904 417452 . - 0 ID=cds-WP_045340693.1;Parent=gene-CCO53_RS05945;Dbxref=GenBank:WP_045340693.1;Name=WP_045340693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=CCO53_RS05945;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_045340693.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 417667 418878 . + . ID=gene-CCO53_RS05950;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=CCO53_RS05950;old_locus_tag=CCO53_05940 NZ_NPLZ01000002.1 Protein Homology CDS 417667 418878 . + 0 ID=cds-WP_000140480.1;Parent=gene-CCO53_RS05950;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=CCO53_RS05950;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 418936 419253 . + . ID=gene-CCO53_RS05955;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=CCO53_RS05955;old_locus_tag=CCO53_05945 NZ_NPLZ01000002.1 Protein Homology CDS 418936 419253 . + 0 ID=cds-WP_000561983.1;Parent=gene-CCO53_RS05955;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=CCO53_RS05955;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 419298 419711 . - . ID=gene-CCO53_RS05960;Name=CCO53_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05960;old_locus_tag=CCO53_05950 NZ_NPLZ01000002.1 Protein Homology CDS 419298 419711 . - 0 ID=cds-WP_001537782.1;Parent=gene-CCO53_RS05960;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=CCO53_RS05960;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 419885 420547 . + . ID=gene-CCO53_RS05965;Name=CCO53_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05965;old_locus_tag=CCO53_05955 NZ_NPLZ01000002.1 Protein Homology CDS 419885 420547 . + 0 ID=cds-WP_000847719.1;Parent=gene-CCO53_RS05965;Dbxref=GenBank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=CCO53_RS05965;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 420642 421100 . + . ID=gene-CCO53_RS05970;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=CCO53_RS05970;old_locus_tag=CCO53_05960 NZ_NPLZ01000002.1 Protein Homology CDS 420642 421100 . + 0 ID=cds-WP_000424187.1;Parent=gene-CCO53_RS05970;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=CCO53_RS05970;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 421136 423190 . - . ID=gene-CCO53_RS05975;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=CCO53_RS05975;old_locus_tag=CCO53_05965 NZ_NPLZ01000002.1 Protein Homology CDS 421136 423190 . - 0 ID=cds-WP_000420523.1;Parent=gene-CCO53_RS05975;Dbxref=GenBank:WP_000420523.1;Name=WP_000420523.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=CCO53_RS05975;product=DNA helicase IV;protein_id=WP_000420523.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 423314 423760 . + . ID=gene-CCO53_RS05980;Name=CCO53_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05980;old_locus_tag=CCO53_05970 NZ_NPLZ01000002.1 Protein Homology CDS 423314 423760 . + 0 ID=cds-WP_001261222.1;Parent=gene-CCO53_RS05980;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=CCO53_RS05980;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 423779 425932 . + . ID=gene-CCO53_RS05985;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=CCO53_RS05985;old_locus_tag=CCO53_05975 NZ_NPLZ01000002.1 Protein Homology CDS 423779 425932 . + 0 ID=cds-WP_000950876.1;Parent=gene-CCO53_RS05985;Dbxref=GenBank:WP_000950876.1;Name=WP_000950876.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=CCO53_RS05985;product=YccS family putative transporter;protein_id=WP_000950876.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 425919 426524 . - . ID=gene-CCO53_RS05990;Name=CCO53_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS05990;old_locus_tag=CCO53_05980 NZ_NPLZ01000002.1 Protein Homology CDS 425919 426524 . - 0 ID=cds-WP_001202375.1;Parent=gene-CCO53_RS05990;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=CCO53_RS05990;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 426741 427250 . + . ID=gene-CCO53_RS05995;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=CCO53_RS05995;old_locus_tag=CCO53_05985 NZ_NPLZ01000002.1 Protein Homology CDS 426741 427250 . + 0 ID=cds-WP_000288732.1;Parent=gene-CCO53_RS05995;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=CCO53_RS05995;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 427607 428659 . + . ID=gene-CCO53_RS06000;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=CCO53_RS06000;old_locus_tag=CCO53_05990 NZ_NPLZ01000002.1 Protein Homology CDS 427607 428659 . + 0 ID=cds-WP_001670727.1;Parent=gene-CCO53_RS06000;Dbxref=GenBank:WP_001670727.1;Name=WP_001670727.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=CCO53_RS06000;product=porin OmpA;protein_id=WP_001670727.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 428731 429183 . - . ID=gene-CCO53_RS06005;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=CCO53_RS06005;old_locus_tag=CCO53_05995 NZ_NPLZ01000002.1 Protein Homology CDS 428731 429183 . - 0 ID=cds-WP_000877172.1;Parent=gene-CCO53_RS06005;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=CCO53_RS06005;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 429369 431129 . + . ID=gene-CCO53_RS06010;Name=CCO53_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06010;old_locus_tag=CCO53_06000 NZ_NPLZ01000002.1 Protein Homology CDS 429369 431129 . + 0 ID=cds-WP_000156454.1;Parent=gene-CCO53_RS06010;Dbxref=GenBank:WP_000156454.1;Name=WP_000156454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=CCO53_RS06010;product=AAA family ATPase;protein_id=WP_000156454.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 431198 431716 . + . ID=gene-CCO53_RS06015;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=CCO53_RS06015;old_locus_tag=CCO53_06005 NZ_NPLZ01000002.1 Protein Homology CDS 431198 431716 . + 0 ID=cds-WP_000227928.1;Parent=gene-CCO53_RS06015;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=CCO53_RS06015;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 431816 431983 . - . ID=gene-CCO53_RS06020;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=CCO53_RS06020;old_locus_tag=CCO53_06010 NZ_NPLZ01000002.1 Protein Homology CDS 431816 431983 . - 0 ID=cds-WP_001537784.1;Parent=gene-CCO53_RS06020;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=CCO53_RS06020;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 432239 432802 . - . ID=gene-CCO53_RS06025;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=CCO53_RS06025;old_locus_tag=CCO53_06015 NZ_NPLZ01000002.1 Protein Homology CDS 432239 432802 . - 0 ID=cds-WP_000759136.1;Parent=gene-CCO53_RS06025;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=CCO53_RS06025;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 432799 434439 . - . ID=gene-CCO53_RS06030;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=CCO53_RS06030;old_locus_tag=CCO53_06020 NZ_NPLZ01000002.1 Protein Homology CDS 432799 434439 . - 0 ID=cds-WP_058331343.1;Parent=gene-CCO53_RS06030;Dbxref=GenBank:WP_058331343.1;Name=WP_058331343.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=CCO53_RS06030;product=intermembrane transport protein PqiB;protein_id=WP_058331343.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 434444 435697 . - . ID=gene-CCO53_RS06035;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=CCO53_RS06035;old_locus_tag=CCO53_06025 NZ_NPLZ01000002.1 Protein Homology CDS 434444 435697 . - 0 ID=cds-WP_000333145.1;Parent=gene-CCO53_RS06035;Dbxref=GenBank:WP_000333145.1;Name=WP_000333145.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=CCO53_RS06035;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333145.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 435712 437619 . - . ID=gene-CCO53_RS06040;Name=CCO53_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06040;old_locus_tag=CCO53_06030 NZ_NPLZ01000002.1 Protein Homology CDS 435712 437619 . - 0 ID=cds-WP_000053044.1;Parent=gene-CCO53_RS06040;Dbxref=GenBank:WP_000053044.1;Name=WP_000053044.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=CCO53_RS06040;product=ABC transporter ATP-binding protein;protein_id=WP_000053044.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 437632 439740 . - . ID=gene-CCO53_RS06045;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=CCO53_RS06045;old_locus_tag=CCO53_06035 NZ_NPLZ01000002.1 Protein Homology CDS 437632 439740 . - 0 ID=cds-WP_001086485.1;Parent=gene-CCO53_RS06045;Dbxref=GenBank:WP_001086485.1;Name=WP_001086485.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=CCO53_RS06045;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086485.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 439839 440948 . + . ID=gene-CCO53_RS06050;Name=CCO53_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06050;old_locus_tag=CCO53_06040 NZ_NPLZ01000002.1 Protein Homology CDS 439839 440948 . + 0 ID=cds-WP_023201781.1;Parent=gene-CCO53_RS06050;Dbxref=GenBank:WP_023201781.1;Name=WP_023201781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=CCO53_RS06050;product=YcbX family protein;protein_id=WP_023201781.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 440945 441487 . - . ID=gene-CCO53_RS06055;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=CCO53_RS06055;old_locus_tag=CCO53_06045 NZ_NPLZ01000002.1 Protein Homology CDS 440945 441487 . - 0 ID=cds-WP_001220671.1;Parent=gene-CCO53_RS06055;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=CCO53_RS06055;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 441653 442663 . - . ID=gene-CCO53_RS06060;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=CCO53_RS06060;old_locus_tag=CCO53_06050 NZ_NPLZ01000002.1 Protein Homology CDS 441653 442663 . - 0 ID=cds-WP_000291723.1;Parent=gene-CCO53_RS06060;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=CCO53_RS06060;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 442871 445483 . - . ID=gene-CCO53_RS06065;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=CCO53_RS06065;old_locus_tag=CCO53_06055 NZ_NPLZ01000002.1 Protein Homology CDS 442871 445483 . - 0 ID=cds-WP_094887600.1;Parent=gene-CCO53_RS06065;Dbxref=GenBank:WP_094887600.1;Name=WP_094887600.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=CCO53_RS06065;product=aminopeptidase N;protein_id=WP_094887600.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 445750 446952 . + . ID=gene-CCO53_RS06070;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CCO53_RS06070;old_locus_tag=CCO53_06060 NZ_NPLZ01000002.1 Protein Homology CDS 445750 446952 . + 0 ID=cds-WP_000191404.1;Parent=gene-CCO53_RS06070;Dbxref=GenBank:WP_000191404.1;Name=WP_000191404.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=CCO53_RS06070;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191404.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 447030 448466 . - . ID=gene-CCO53_RS06075;Name=CCO53_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06075;old_locus_tag=CCO53_06065 NZ_NPLZ01000002.1 Protein Homology CDS 447030 448466 . - 0 ID=cds-WP_058331341.1;Parent=gene-CCO53_RS06075;Dbxref=GenBank:WP_058331341.1;Name=WP_058331341.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459978.1;locus_tag=CCO53_RS06075;product=alanine/glycine:cation symporter family protein;protein_id=WP_058331341.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 448711 449925 . - . ID=gene-CCO53_RS06080;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=CCO53_RS06080;old_locus_tag=CCO53_06070 NZ_NPLZ01000002.1 Protein Homology CDS 448711 449925 . - 0 ID=cds-WP_058331340.1;Parent=gene-CCO53_RS06080;Dbxref=GenBank:WP_058331340.1;Name=WP_058331340.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506288.1;locus_tag=CCO53_RS06080;product=diaminopropionate ammonia-lyase;protein_id=WP_058331340.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 450243 450704 . + . ID=gene-CCO53_RS06090;Name=CCO53_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06090;old_locus_tag=CCO53_06080 NZ_NPLZ01000002.1 Protein Homology CDS 450243 450704 . + 0 ID=cds-WP_000762342.1;Parent=gene-CCO53_RS06090;Dbxref=GenBank:WP_000762342.1;Name=WP_000762342.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=CCO53_RS06090;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000762342.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 450905 452305 . + . ID=gene-CCO53_RS06095;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CCO53_RS06095;old_locus_tag=CCO53_06085 NZ_NPLZ01000002.1 Protein Homology CDS 450905 452305 . + 0 ID=cds-WP_000117870.1;Parent=gene-CCO53_RS06095;Dbxref=GenBank:WP_000117870.1;Name=WP_000117870.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=CCO53_RS06095;product=asparagine--tRNA ligase;protein_id=WP_000117870.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 452911 454002 . + . ID=gene-CCO53_RS06100;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=CCO53_RS06100;old_locus_tag=CCO53_06090 NZ_NPLZ01000002.1 Protein Homology CDS 452911 454002 . + 0 ID=cds-WP_000977709.1;Parent=gene-CCO53_RS06100;Dbxref=GenBank:WP_000977709.1;Name=WP_000977709.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=CCO53_RS06100;product=porin OmpF;protein_id=WP_000977709.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 454187 455377 . + . ID=gene-CCO53_RS06105;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=CCO53_RS06105;old_locus_tag=CCO53_06095 NZ_NPLZ01000002.1 Protein Homology CDS 454187 455377 . + 0 ID=cds-WP_000462653.1;Parent=gene-CCO53_RS06105;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=CCO53_RS06105;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 455439 456086 . - . ID=gene-CCO53_RS06110;Name=CCO53_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06110;old_locus_tag=CCO53_06100 NZ_NPLZ01000002.1 Protein Homology CDS 455439 456086 . - 0 ID=cds-WP_001109470.1;Parent=gene-CCO53_RS06110;Dbxref=GenBank:WP_001109470.1;Name=WP_001109470.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=CCO53_RS06110;product=MBL fold metallo-hydrolase;protein_id=WP_001109470.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 456114 456662 . - . ID=gene-CCO53_RS06115;Name=CCO53_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06115;old_locus_tag=CCO53_06105 NZ_NPLZ01000002.1 Protein Homology CDS 456114 456662 . - 0 ID=cds-WP_000357052.1;Parent=gene-CCO53_RS06115;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=CCO53_RS06115;product=YcbK family protein;protein_id=WP_000357052.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 456922 458769 . - . ID=gene-CCO53_RS06125;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=CCO53_RS06125;old_locus_tag=CCO53_06115 NZ_NPLZ01000002.1 Protein Homology CDS 456922 458769 . - 0 ID=cds-WP_058331339.1;Parent=gene-CCO53_RS06125;Dbxref=GenBank:WP_058331339.1;Name=WP_058331339.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=CCO53_RS06125;product=L%2CD-transpeptidase;protein_id=WP_058331339.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 459114 463580 . - . ID=gene-CCO53_RS06130;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=CCO53_RS06130;old_locus_tag=CCO53_06120 NZ_NPLZ01000002.1 Protein Homology CDS 459114 463580 . - 0 ID=cds-WP_094887601.1;Parent=gene-CCO53_RS06130;Dbxref=GenBank:WP_094887601.1;Name=WP_094887601.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=CCO53_RS06130;product=chromosome partition protein MukB;protein_id=WP_094887601.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 463580 464284 . - . ID=gene-CCO53_RS06135;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=CCO53_RS06135;old_locus_tag=CCO53_06125 NZ_NPLZ01000002.1 Protein Homology CDS 463580 464284 . - 0 ID=cds-WP_000060025.1;Parent=gene-CCO53_RS06135;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=CCO53_RS06135;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 464265 465587 . - . ID=gene-CCO53_RS06140;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=CCO53_RS06140;old_locus_tag=CCO53_06130 NZ_NPLZ01000002.1 Protein Homology CDS 464265 465587 . - 0 ID=cds-WP_001288828.1;Parent=gene-CCO53_RS06140;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=CCO53_RS06140;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 465580 466383 . - . ID=gene-CCO53_RS06145;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=CCO53_RS06145;old_locus_tag=CCO53_06135 NZ_NPLZ01000002.1 Protein Homology CDS 465580 466383 . - 0 ID=cds-WP_094887602.1;Parent=gene-CCO53_RS06145;Dbxref=GenBank:WP_094887602.1;Name=WP_094887602.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=CCO53_RS06145;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_094887602.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 466519 467295 . + . ID=gene-CCO53_RS06150;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=CCO53_RS06150;old_locus_tag=CCO53_06140 NZ_NPLZ01000002.1 Protein Homology CDS 466519 467295 . + 0 ID=cds-WP_000899553.1;Parent=gene-CCO53_RS06150;Dbxref=GenBank:WP_000899553.1;Name=WP_000899553.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=CCO53_RS06150;product=envelope biogenesis factor ElyC;protein_id=WP_000899553.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 467275 468168 . - . ID=gene-CCO53_RS06155;Name=CCO53_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06155;old_locus_tag=CCO53_06145 NZ_NPLZ01000002.1 Protein Homology CDS 467275 468168 . - 0 ID=cds-WP_000436889.1;Parent=gene-CCO53_RS06155;Dbxref=GenBank:WP_000436889.1;Name=WP_000436889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=CCO53_RS06155;product=YcbJ family phosphotransferase;protein_id=WP_000436889.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 468379 469125 . - . ID=gene-CCO53_RS06160;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CCO53_RS06160;old_locus_tag=CCO53_06150 NZ_NPLZ01000002.1 Protein Homology CDS 468379 469125 . - 0 ID=cds-WP_023237954.1;Parent=gene-CCO53_RS06160;Dbxref=GenBank:WP_023237954.1;Name=WP_023237954.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=CCO53_RS06160;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_023237954.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 469122 469304 . - . ID=gene-CCO53_RS06165;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=CCO53_RS06165;old_locus_tag=CCO53_06155 NZ_NPLZ01000002.1 Protein Homology CDS 469122 469304 . - 0 ID=cds-WP_000350061.1;Parent=gene-CCO53_RS06165;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=CCO53_RS06165;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 469356 470588 . - . ID=gene-CCO53_RS06170;Name=CCO53_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06170;old_locus_tag=CCO53_06160 NZ_NPLZ01000002.1 Protein Homology CDS 469356 470588 . - 0 ID=cds-WP_058331336.1;Parent=gene-CCO53_RS06170;Dbxref=GenBank:WP_058331336.1;Name=WP_058331336.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=CCO53_RS06170;product=winged helix-turn-helix domain-containing protein;protein_id=WP_058331336.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 470632 471609 . - . ID=gene-CCO53_RS06175;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CCO53_RS06175;old_locus_tag=CCO53_06165 NZ_NPLZ01000002.1 Protein Homology CDS 470632 471609 . - 0 ID=cds-WP_000561699.1;Parent=gene-CCO53_RS06175;Dbxref=GenBank:WP_000561699.1;Name=WP_000561699.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=CCO53_RS06175;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000561699.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 471606 473354 . - . ID=gene-CCO53_RS06180;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=CCO53_RS06180;old_locus_tag=CCO53_06170 NZ_NPLZ01000002.1 Protein Homology CDS 471606 473354 . - 0 ID=cds-WP_000551246.1;Parent=gene-CCO53_RS06180;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=CCO53_RS06180;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 473391 475655 . - . ID=gene-CCO53_RS06185;Name=CCO53_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06185;old_locus_tag=CCO53_06175 NZ_NPLZ01000002.1 Protein Homology CDS 473391 475655 . - 0 ID=cds-WP_058331335.1;Parent=gene-CCO53_RS06185;Dbxref=GenBank:WP_058331335.1;Name=WP_058331335.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=CCO53_RS06185;product=ComEC family protein;protein_id=WP_058331335.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 475885 476169 . - . ID=gene-CCO53_RS06190;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=CCO53_RS06190;old_locus_tag=CCO53_06180 NZ_NPLZ01000002.1 Protein Homology CDS 475885 476169 . - 0 ID=cds-WP_000167332.1;Parent=gene-CCO53_RS06190;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=CCO53_RS06190;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 476325 477998 . - . ID=gene-CCO53_RS06195;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CCO53_RS06195;old_locus_tag=CCO53_06185 NZ_NPLZ01000002.1 Protein Homology CDS 476325 477998 . - 0 ID=cds-WP_000140324.1;Parent=gene-CCO53_RS06195;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=CCO53_RS06195;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 478112 478795 . - . ID=gene-CCO53_RS06200;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CCO53_RS06200;old_locus_tag=CCO53_06190 NZ_NPLZ01000002.1 Protein Homology CDS 478112 478795 . - 0 ID=cds-WP_000125003.1;Parent=gene-CCO53_RS06200;Dbxref=GenBank:WP_000125003.1;Name=WP_000125003.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=CCO53_RS06200;product=(d)CMP kinase;protein_id=WP_000125003.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 478968 479729 . - . ID=gene-CCO53_RS06205;Name=CCO53_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06205;old_locus_tag=CCO53_06195 NZ_NPLZ01000002.1 Protein Homology CDS 478968 479729 . - 0 ID=cds-WP_000792301.1;Parent=gene-CCO53_RS06205;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=CCO53_RS06205;product=M48 family metallopeptidase;protein_id=WP_000792301.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 479872 481155 . - . ID=gene-CCO53_RS06210;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CCO53_RS06210;old_locus_tag=CCO53_06200 NZ_NPLZ01000002.1 Protein Homology CDS 479872 481155 . - 0 ID=cds-WP_058331334.1;Parent=gene-CCO53_RS06210;Dbxref=GenBank:WP_058331334.1;Name=WP_058331334.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=CCO53_RS06210;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_058331334.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 481225 482313 . - . ID=gene-CCO53_RS06215;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=CCO53_RS06215;old_locus_tag=CCO53_06205 NZ_NPLZ01000002.1 Protein Homology CDS 481225 482313 . - 0 ID=cds-WP_058331333.1;Parent=gene-CCO53_RS06215;Dbxref=GenBank:WP_058331333.1;Name=WP_058331333.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=CCO53_RS06215;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_058331333.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 482499 483191 . - . ID=gene-CCO53_RS06220;Name=CCO53_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06220;old_locus_tag=CCO53_06210 NZ_NPLZ01000002.1 Protein Homology CDS 482499 483191 . - 0 ID=cds-WP_000642868.1;Parent=gene-CCO53_RS06220;Dbxref=GenBank:WP_000642868.1;Name=WP_000642868.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=CCO53_RS06220;product=DUF421 domain-containing protein;protein_id=WP_000642868.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 483328 485088 . + . ID=gene-CCO53_RS06225;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=CCO53_RS06225;old_locus_tag=CCO53_06215 NZ_NPLZ01000002.1 Protein Homology CDS 483328 485088 . + 0 ID=cds-WP_058331354.1;Parent=gene-CCO53_RS06225;Dbxref=GenBank:WP_058331354.1;Name=WP_058331354.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=CCO53_RS06225;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_058331354.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 485493 486350 . + . ID=gene-CCO53_RS06230;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=CCO53_RS06230;old_locus_tag=CCO53_06220 NZ_NPLZ01000002.1 Protein Homology CDS 485493 486350 . + 0 ID=cds-WP_000642539.1;Parent=gene-CCO53_RS06230;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=CCO53_RS06230;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 486410 488692 . + . ID=gene-CCO53_RS06235;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO53_RS06235;old_locus_tag=CCO53_06225 NZ_NPLZ01000002.1 Protein Homology CDS 486410 488692 . + 0 ID=cds-WP_001292799.1;Parent=gene-CCO53_RS06235;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=CCO53_RS06235;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 488765 489724 . - . ID=gene-CCO53_RS06240;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=CCO53_RS06240;old_locus_tag=CCO53_06230 NZ_NPLZ01000002.1 Protein Homology CDS 488765 489724 . - 0 ID=cds-WP_080160291.1;Parent=gene-CCO53_RS06240;Dbxref=GenBank:WP_080160291.1;Name=WP_080160291.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=CCO53_RS06240;product=type III secretion system effector SopD2;protein_id=WP_080160291.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq pseudogene 489846 490165 . + . ID=gene-CCO53_RS23960;Name=CCO53_RS23960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23960;partial=true;pseudo=true;start_range=.,489846 NZ_NPLZ01000002.1 Protein Homology CDS 489846 490165 . + 0 ID=cds-CCO53_RS23960;Parent=gene-CCO53_RS23960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=CCO53_RS23960;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,489846;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 490284 491081 . + . ID=gene-CCO53_RS06245;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CCO53_RS06245;old_locus_tag=CCO53_06235 NZ_NPLZ01000002.1 Protein Homology CDS 490284 491081 . + 0 ID=cds-WP_000067928.1;Parent=gene-CCO53_RS06245;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=CCO53_RS06245;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 491374 492795 . - . ID=gene-CCO53_RS06250;Name=CCO53_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06250;old_locus_tag=CCO53_06240 NZ_NPLZ01000002.1 Protein Homology CDS 491374 492795 . - 0 ID=cds-WP_080160290.1;Parent=gene-CCO53_RS06250;Dbxref=GenBank:WP_080160290.1;Name=WP_080160290.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=CCO53_RS06250;product=APC family permease;protein_id=WP_080160290.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 493013 494161 . - . ID=gene-CCO53_RS06255;Name=CCO53_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06255;old_locus_tag=CCO53_06245 NZ_NPLZ01000002.1 Protein Homology CDS 493013 494161 . - 0 ID=cds-WP_000109271.1;Parent=gene-CCO53_RS06255;Dbxref=GenBank:WP_000109271.1;Name=WP_000109271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=CCO53_RS06255;product=MFS transporter;protein_id=WP_000109271.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 494511 495374 . - . ID=gene-CCO53_RS06260;Name=CCO53_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06260;old_locus_tag=CCO53_06250 NZ_NPLZ01000002.1 Protein Homology CDS 494511 495374 . - 0 ID=cds-WP_000534681.1;Parent=gene-CCO53_RS06260;Dbxref=GenBank:WP_000534681.1;Name=WP_000534681.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=CCO53_RS06260;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534681.1;transl_table=11 NZ_NPLZ01000002.1 RefSeq gene 495376 495725 . - . ID=gene-CCO53_RS06265;Name=CCO53_RS06265;end_range=495725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06265;old_locus_tag=CCO53_06255;partial=true NZ_NPLZ01000002.1 Protein Homology CDS 495376 495725 . - 2 ID=cds-WP_049280292.1;Parent=gene-CCO53_RS06265;Dbxref=GenBank:WP_049280292.1;Name=WP_049280292.1;end_range=495725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO53_RS06265;partial=true;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_049280292.1;transl_table=11 ##sequence-region NZ_NPLZ01000020.1 1 37875 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000020.1 RefSeq region 1 37875 . + . ID=NZ_NPLZ01000020.1:1..37875;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000020.1 RefSeq gene 8 123 . + . ID=gene-CCO53_RS22615;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO53_RS22615;old_locus_tag=CCO53_22570 NZ_NPLZ01000020.1 cmsearch rRNA 8 123 . + . ID=rna-CCO53_RS22615;Parent=gene-CCO53_RS22615;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS22615;product=5S ribosomal RNA NZ_NPLZ01000020.1 cmsearch exon 8 123 . + . ID=exon-CCO53_RS22615-1;Parent=rna-CCO53_RS22615;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS22615;product=5S ribosomal RNA NZ_NPLZ01000020.1 RefSeq gene 315 391 . + . ID=gene-CCO53_RS22620;Name=CCO53_RS22620;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS22620;old_locus_tag=CCO53_22575 NZ_NPLZ01000020.1 tRNAscan-SE tRNA 315 391 . + . ID=rna-CCO53_RS22620;Parent=gene-CCO53_RS22620;anticodon=(pos:349..351);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS22620;product=tRNA-Asp NZ_NPLZ01000020.1 tRNAscan-SE exon 315 391 . + . ID=exon-CCO53_RS22620-1;Parent=rna-CCO53_RS22620;anticodon=(pos:349..351);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS22620;product=tRNA-Asp NZ_NPLZ01000020.1 RefSeq gene 556 1359 . + . ID=gene-CCO53_RS22625;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=CCO53_RS22625;old_locus_tag=CCO53_22580 NZ_NPLZ01000020.1 Protein Homology CDS 556 1359 . + 0 ID=cds-WP_000154864.1;Parent=gene-CCO53_RS22625;Dbxref=GenBank:WP_000154864.1;Name=WP_000154864.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=CCO53_RS22625;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000154864.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 1381 2295 . - . ID=gene-CCO53_RS22630;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=CCO53_RS22630;old_locus_tag=CCO53_22585 NZ_NPLZ01000020.1 Protein Homology CDS 1381 2295 . - 0 ID=cds-WP_000648534.1;Parent=gene-CCO53_RS22630;Dbxref=GenBank:WP_000648534.1;Name=WP_000648534.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=CCO53_RS22630;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648534.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 2400 3575 . + . ID=gene-CCO53_RS22635;Name=CCO53_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22635;old_locus_tag=CCO53_22590 NZ_NPLZ01000020.1 Protein Homology CDS 2400 3575 . + 0 ID=cds-WP_094887842.1;Parent=gene-CCO53_RS22635;Dbxref=GenBank:WP_094887842.1;Name=WP_094887842.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=CCO53_RS22635;product=MFS transporter;protein_id=WP_094887842.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 3707 4507 . + . ID=gene-CCO53_RS22640;Name=CCO53_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22640;old_locus_tag=CCO53_22595 NZ_NPLZ01000020.1 Protein Homology CDS 3707 4507 . + 0 ID=cds-WP_001230970.1;Parent=gene-CCO53_RS22640;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=CCO53_RS22640;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 4585 5355 . + . ID=gene-CCO53_RS22645;Name=CCO53_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22645;old_locus_tag=CCO53_22600 NZ_NPLZ01000020.1 Protein Homology CDS 4585 5355 . + 0 ID=cds-WP_000207219.1;Parent=gene-CCO53_RS22645;Dbxref=GenBank:WP_000207219.1;Name=WP_000207219.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=CCO53_RS22645;product=class I SAM-dependent methyltransferase;protein_id=WP_000207219.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 5411 6778 . - . ID=gene-CCO53_RS22650;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=CCO53_RS22650;old_locus_tag=CCO53_22605 NZ_NPLZ01000020.1 Protein Homology CDS 5411 6778 . - 0 ID=cds-WP_000644705.1;Parent=gene-CCO53_RS22650;Dbxref=GenBank:WP_000644705.1;Name=WP_000644705.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=CCO53_RS22650;product=murein transglycosylase D;protein_id=WP_000644705.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 6850 7605 . - . ID=gene-CCO53_RS22655;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=CCO53_RS22655;old_locus_tag=CCO53_22610 NZ_NPLZ01000020.1 Protein Homology CDS 6850 7605 . - 0 ID=cds-WP_001052773.1;Parent=gene-CCO53_RS22655;Dbxref=GenBank:WP_001052773.1;Name=WP_001052773.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=CCO53_RS22655;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052773.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 7640 8362 . + . ID=gene-CCO53_RS22660;Name=CCO53_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22660;old_locus_tag=CCO53_22615 NZ_NPLZ01000020.1 Protein Homology CDS 7640 8362 . + 0 ID=cds-WP_000801238.1;Parent=gene-CCO53_RS22660;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=CCO53_RS22660;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 8359 8826 . - . ID=gene-CCO53_RS22665;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=CCO53_RS22665;old_locus_tag=CCO53_22620 NZ_NPLZ01000020.1 Protein Homology CDS 8359 8826 . - 0 ID=cds-WP_000917872.1;Parent=gene-CCO53_RS22665;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=CCO53_RS22665;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 8890 9621 . + . ID=gene-CCO53_RS22670;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=CCO53_RS22670;old_locus_tag=CCO53_22625 NZ_NPLZ01000020.1 Protein Homology CDS 8890 9621 . + 0 ID=cds-WP_001670675.1;Parent=gene-CCO53_RS22670;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=CCO53_RS22670;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 9755 9831 . + . ID=gene-CCO53_RS22675;Name=CCO53_RS22675;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS22675;old_locus_tag=CCO53_22630 NZ_NPLZ01000020.1 tRNAscan-SE tRNA 9755 9831 . + . ID=rna-CCO53_RS22675;Parent=gene-CCO53_RS22675;anticodon=(pos:9789..9791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS22675;product=tRNA-Asp NZ_NPLZ01000020.1 tRNAscan-SE exon 9755 9831 . + . ID=exon-CCO53_RS22675-1;Parent=rna-CCO53_RS22675;anticodon=(pos:9789..9791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS22675;product=tRNA-Asp NZ_NPLZ01000020.1 RefSeq gene 10151 11206 . - . ID=gene-CCO53_RS22680;Name=CCO53_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22680;old_locus_tag=CCO53_22635 NZ_NPLZ01000020.1 Protein Homology CDS 10151 11206 . - 0 ID=cds-WP_000367619.1;Parent=gene-CCO53_RS22680;Dbxref=GenBank:WP_000367619.1;Name=WP_000367619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=CCO53_RS22680;product=ImpA family type VI secretion system protein;protein_id=WP_000367619.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 11217 12212 . - . ID=gene-CCO53_RS22685;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=CCO53_RS22685;old_locus_tag=CCO53_22640 NZ_NPLZ01000020.1 Protein Homology CDS 11217 12212 . - 0 ID=cds-WP_094887843.1;Parent=gene-CCO53_RS22685;Dbxref=GenBank:WP_094887843.1;Name=WP_094887843.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=CCO53_RS22685;product=type VI secretion system baseplate subunit TssG;protein_id=WP_094887843.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 12209 14092 . - . ID=gene-CCO53_RS22690;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=CCO53_RS22690;old_locus_tag=CCO53_22645 NZ_NPLZ01000020.1 Protein Homology CDS 12209 14092 . - 0 ID=cds-WP_000371506.1;Parent=gene-CCO53_RS22690;Dbxref=GenBank:WP_000371506.1;Name=WP_000371506.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=CCO53_RS22690;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000371506.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 14108 14602 . - . ID=gene-CCO53_RS22695;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=CCO53_RS22695;old_locus_tag=CCO53_22650 NZ_NPLZ01000020.1 Protein Homology CDS 14108 14602 . - 0 ID=cds-WP_000108007.1;Parent=gene-CCO53_RS22695;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=CCO53_RS22695;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 14599 15423 . - . ID=gene-CCO53_RS22700;Name=CCO53_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22700;old_locus_tag=CCO53_22655 NZ_NPLZ01000020.1 Protein Homology CDS 14599 15423 . - 0 ID=cds-WP_001647896.1;Parent=gene-CCO53_RS22700;Dbxref=GenBank:WP_001647896.1;Name=WP_001647896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=CCO53_RS22700;product=type VI secretion system accessory protein TagJ;protein_id=WP_001647896.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 15410 16312 . - . ID=gene-CCO53_RS22705;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=CCO53_RS22705;old_locus_tag=CCO53_22660 NZ_NPLZ01000020.1 Protein Homology CDS 15410 16312 . - 0 ID=cds-WP_094887844.1;Parent=gene-CCO53_RS22705;Dbxref=GenBank:WP_094887844.1;Name=WP_094887844.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=CCO53_RS22705;product=type VI secretion system-associated protein TagK;protein_id=WP_094887844.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 16680 19319 . + . ID=gene-CCO53_RS22710;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=CCO53_RS22710;old_locus_tag=CCO53_22665 NZ_NPLZ01000020.1 Protein Homology CDS 16680 19319 . + 0 ID=cds-WP_094887845.1;Parent=gene-CCO53_RS22710;Dbxref=GenBank:WP_094887845.1;Name=WP_094887845.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=CCO53_RS22710;product=type VI secretion system ATPase TssH;protein_id=WP_094887845.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 19419 19961 . + . ID=gene-CCO53_RS22715;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=CCO53_RS22715;old_locus_tag=CCO53_22670 NZ_NPLZ01000020.1 Protein Homology CDS 19419 19961 . + 0 ID=cds-WP_000996818.1;Parent=gene-CCO53_RS22715;Dbxref=GenBank:WP_000996818.1;Name=WP_000996818.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=CCO53_RS22715;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996818.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 19985 21493 . + . ID=gene-CCO53_RS22720;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=CCO53_RS22720;old_locus_tag=CCO53_22675 NZ_NPLZ01000020.1 Protein Homology CDS 19985 21493 . + 0 ID=cds-WP_000013884.1;Parent=gene-CCO53_RS22720;Dbxref=GenBank:WP_000013884.1;Name=WP_000013884.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=CCO53_RS22720;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013884.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 21546 21947 . + . ID=gene-CCO53_RS22725;Name=CCO53_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22725;old_locus_tag=CCO53_22680 NZ_NPLZ01000020.1 Protein Homology CDS 21546 21947 . + 0 ID=cds-WP_001147175.1;Parent=gene-CCO53_RS22725;Dbxref=GenBank:WP_001147175.1;Name=WP_001147175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147173.1;locus_tag=CCO53_RS22725;product=BPSL0067 family protein;protein_id=WP_001147175.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 21919 22344 . + . ID=gene-CCO53_RS22730;Name=CCO53_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22730;old_locus_tag=CCO53_22685 NZ_NPLZ01000020.1 Protein Homology CDS 21919 22344 . + 0 ID=cds-WP_001171576.1;Parent=gene-CCO53_RS22730;Dbxref=GenBank:WP_001171576.1;Name=WP_001171576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001171576.1;locus_tag=CCO53_RS22730;product=STY0301 family protein;protein_id=WP_001171576.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 22581 23066 . + . ID=gene-CCO53_RS22735;Name=CCO53_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22735;old_locus_tag=CCO53_22690 NZ_NPLZ01000020.1 Protein Homology CDS 22581 23066 . + 0 ID=cds-WP_000312802.1;Parent=gene-CCO53_RS22735;Dbxref=GenBank:WP_000312802.1;Name=WP_000312802.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=CCO53_RS22735;product=Hcp family type VI secretion system effector;protein_id=WP_000312802.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq pseudogene 23133 23327 . + . ID=gene-CCO53_RS24125;Name=CCO53_RS24125;end_range=23327,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24125;partial=true;pseudo=true NZ_NPLZ01000020.1 Protein Homology CDS 23133 23327 . + 0 ID=cds-CCO53_RS24125;Parent=gene-CCO53_RS24125;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO53_RS24125;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 23370 23855 . + . ID=gene-CCO53_RS22740;Name=CCO53_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22740;old_locus_tag=CCO53_22695 NZ_NPLZ01000020.1 Protein Homology CDS 23370 23855 . + 0 ID=cds-WP_001081550.1;Parent=gene-CCO53_RS22740;Dbxref=GenBank:WP_001081550.1;Name=WP_001081550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=CCO53_RS22740;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081550.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 23840 24223 . + . ID=gene-CCO53_RS22745;Name=CCO53_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22745;old_locus_tag=CCO53_22700 NZ_NPLZ01000020.1 Protein Homology CDS 23840 24223 . + 0 ID=cds-WP_000379146.1;Parent=gene-CCO53_RS22745;Dbxref=GenBank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=CCO53_RS22745;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 24366 24851 . + . ID=gene-CCO53_RS22750;Name=CCO53_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22750;old_locus_tag=CCO53_22705 NZ_NPLZ01000020.1 Protein Homology CDS 24366 24851 . + 0 ID=cds-WP_000119443.1;Parent=gene-CCO53_RS22750;Dbxref=GenBank:WP_000119443.1;Name=WP_000119443.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=CCO53_RS22750;product=Hcp family type VI secretion system effector;protein_id=WP_000119443.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 24918 25454 . + . ID=gene-CCO53_RS22755;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=CCO53_RS22755;old_locus_tag=CCO53_22710 NZ_NPLZ01000020.1 Protein Homology CDS 24918 25454 . + 0 ID=cds-WP_020898423.1;Parent=gene-CCO53_RS22755;Dbxref=GenBank:WP_020898423.1;Name=WP_020898423.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO53_RS22755;product=type VI secretion system lipoprotein TssJ;protein_id=WP_020898423.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 25458 26801 . + . ID=gene-CCO53_RS22760;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=CCO53_RS22760;old_locus_tag=CCO53_22715 NZ_NPLZ01000020.1 Protein Homology CDS 25458 26801 . + 0 ID=cds-WP_000118732.1;Parent=gene-CCO53_RS22760;Dbxref=GenBank:WP_000118732.1;Name=WP_000118732.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=CCO53_RS22760;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 26798 28102 . + . ID=gene-CCO53_RS22765;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=CCO53_RS22765;old_locus_tag=CCO53_22720 NZ_NPLZ01000020.1 Protein Homology CDS 26798 28102 . + 0 ID=cds-WP_080160606.1;Parent=gene-CCO53_RS22765;Dbxref=GenBank:WP_080160606.1;Name=WP_080160606.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=CCO53_RS22765;product=type VI secretion system protein TssL%2C long form;protein_id=WP_080160606.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 28107 28880 . + . ID=gene-CCO53_RS22770;Name=CCO53_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22770;old_locus_tag=CCO53_22725 NZ_NPLZ01000020.1 Protein Homology CDS 28107 28880 . + 0 ID=cds-WP_023138338.1;Parent=gene-CCO53_RS22770;Dbxref=GenBank:WP_023138338.1;Name=WP_023138338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=CCO53_RS22770;product=Rap1a/Tai family immunity protein;protein_id=WP_023138338.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 29082 29513 . + . ID=gene-CCO53_RS22775;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=CCO53_RS22775;old_locus_tag=CCO53_22730 NZ_NPLZ01000020.1 Protein Homology CDS 29082 29513 . + 0 ID=cds-WP_023166851.1;Parent=gene-CCO53_RS22775;Dbxref=GenBank:WP_023166851.1;Name=WP_023166851.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=CCO53_RS22775;product=Shiga-like toxin A subunit SciR;protein_id=WP_023166851.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 29547 33416 . + . ID=gene-CCO53_RS22780;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=CCO53_RS22780;old_locus_tag=CCO53_22735 NZ_NPLZ01000020.1 Protein Homology CDS 29547 33416 . + 0 ID=cds-WP_094887846.1;Parent=gene-CCO53_RS22780;Dbxref=GenBank:WP_094887846.1;Name=WP_094887846.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=CCO53_RS22780;product=Type VI secretion protein IcmF;protein_id=WP_094887846.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 33416 34183 . + . ID=gene-CCO53_RS22785;Name=CCO53_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22785;old_locus_tag=CCO53_22740 NZ_NPLZ01000020.1 Protein Homology CDS 33416 34183 . + 0 ID=cds-WP_001254130.1;Parent=gene-CCO53_RS22785;Dbxref=GenBank:WP_001254130.1;Name=WP_001254130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=CCO53_RS22785;product=TagF domain-containing protein;protein_id=WP_001254130.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 34226 34696 . + . ID=gene-CCO53_RS22790;Name=CCO53_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22790;old_locus_tag=CCO53_22745 NZ_NPLZ01000020.1 Protein Homology CDS 34226 34696 . + 0 ID=cds-WP_000501511.1;Parent=gene-CCO53_RS22790;Dbxref=GenBank:WP_000501511.1;Name=WP_000501511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000501515.1;locus_tag=CCO53_RS22790;product=glucosaminidase domain-containing protein;protein_id=WP_000501511.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 34681 35154 . + . ID=gene-CCO53_RS22795;Name=CCO53_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22795;old_locus_tag=CCO53_22750 NZ_NPLZ01000020.1 Protein Homology CDS 34681 35154 . + 0 ID=cds-WP_023213609.1;Parent=gene-CCO53_RS22795;Dbxref=GenBank:WP_023213609.1;Name=WP_023213609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506348.1;locus_tag=CCO53_RS22795;product=hypothetical protein;protein_id=WP_023213609.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq pseudogene 35163 35291 . + . ID=gene-CCO53_RS23905;Name=CCO53_RS23905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23905;partial=true;pseudo=true;start_range=.,35163 NZ_NPLZ01000020.1 Protein Homology CDS 35163 35291 . + 0 ID=cds-CCO53_RS23905;Parent=gene-CCO53_RS23905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254123.1;locus_tag=CCO53_RS23905;partial=true;product=TagF domain-containing protein;pseudo=true;start_range=.,35163;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 35341 36072 . + . ID=gene-CCO53_RS22800;Name=CCO53_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22800;old_locus_tag=CCO53_22755 NZ_NPLZ01000020.1 Protein Homology CDS 35341 36072 . + 0 ID=cds-WP_000040884.1;Parent=gene-CCO53_RS22800;Dbxref=GenBank:WP_000040884.1;Name=WP_000040884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040885.1;locus_tag=CCO53_RS22800;product=hypothetical protein;protein_id=WP_000040884.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 36069 36503 . + . ID=gene-CCO53_RS22805;Name=CCO53_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22805;old_locus_tag=CCO53_22760 NZ_NPLZ01000020.1 Protein Homology CDS 36069 36503 . + 0 ID=cds-WP_023208175.1;Parent=gene-CCO53_RS22805;Dbxref=GenBank:WP_023208175.1;Name=WP_023208175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000616626.1;locus_tag=CCO53_RS22805;product=hypothetical protein;protein_id=WP_023208175.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 36683 36829 . + . ID=gene-CCO53_RS23865;Name=CCO53_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23865 NZ_NPLZ01000020.1 Protein Homology CDS 36683 36829 . + 0 ID=cds-WP_023208174.1;Parent=gene-CCO53_RS23865;Dbxref=GenBank:WP_023208174.1;Name=WP_023208174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551999.1;locus_tag=CCO53_RS23865;product=hypothetical protein;protein_id=WP_023208174.1;transl_table=11 NZ_NPLZ01000020.1 RefSeq pseudogene 36826 37193 . + . ID=gene-CCO53_RS24130;Name=CCO53_RS24130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24130;old_locus_tag=CCO53_22765;pseudo=true NZ_NPLZ01000020.1 Protein Homology CDS 36826 37193 . + 0 ID=cds-CCO53_RS24130;Parent=gene-CCO53_RS24130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706217.1;locus_tag=CCO53_RS24130;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000020.1 RefSeq gene 37218 37875 . + . ID=gene-CCO53_RS22815;Name=CCO53_RS22815;end_range=37875,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22815;old_locus_tag=CCO53_22770;partial=true NZ_NPLZ01000020.1 Protein Homology CDS 37218 37875 . + 0 ID=cds-WP_272897677.1;Parent=gene-CCO53_RS22815;Dbxref=GenBank:WP_272897677.1;Name=WP_272897677.1;end_range=37875,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706218.1;locus_tag=CCO53_RS22815;partial=true;product=phage late control D family protein;protein_id=WP_272897677.1;transl_table=11 ##sequence-region NZ_NPLZ01000021.1 1 35759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000021.1 RefSeq region 1 35759 . + . ID=NZ_NPLZ01000021.1:1..35759;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000021.1 RefSeq pseudogene 1 293 . + . ID=gene-CCO53_RS22820;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO53_RS22820;old_locus_tag=CCO53_22775;partial=true;pseudo=true;start_range=.,1 NZ_NPLZ01000021.1 Protein Homology CDS 1 293 . + 2 ID=cds-CCO53_RS22820;Parent=gene-CCO53_RS22820;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO53_RS22820;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 523 906 . + . ID=gene-CCO53_RS22825;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CCO53_RS22825;old_locus_tag=CCO53_22780 NZ_NPLZ01000021.1 Protein Homology CDS 523 906 . + 0 ID=cds-WP_001275691.1;Parent=gene-CCO53_RS22825;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=CCO53_RS22825;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 908 1453 . + . ID=gene-CCO53_RS22830;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CCO53_RS22830;old_locus_tag=CCO53_22785 NZ_NPLZ01000021.1 Protein Homology CDS 908 1453 . + 0 ID=cds-WP_001287521.1;Parent=gene-CCO53_RS22830;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=CCO53_RS22830;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 1611 2039 . + . ID=gene-CCO53_RS22835;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CCO53_RS22835;old_locus_tag=CCO53_22790 NZ_NPLZ01000021.1 Protein Homology CDS 1611 2039 . + 0 ID=cds-WP_001085926.1;Parent=gene-CCO53_RS22835;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=CCO53_RS22835;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 2043 2747 . + . ID=gene-CCO53_RS22840;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CCO53_RS22840;old_locus_tag=CCO53_22795 NZ_NPLZ01000021.1 Protein Homology CDS 2043 2747 . + 0 ID=cds-WP_001096676.1;Parent=gene-CCO53_RS22840;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=CCO53_RS22840;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 3167 3664 . + . ID=gene-CCO53_RS22850;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CCO53_RS22850;old_locus_tag=CCO53_22805 NZ_NPLZ01000021.1 Protein Homology CDS 3167 3664 . + 0 ID=cds-WP_001207203.1;Parent=gene-CCO53_RS22850;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=CCO53_RS22850;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 3731 4096 . + . ID=gene-CCO53_RS22855;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CCO53_RS22855;old_locus_tag=CCO53_22810 NZ_NPLZ01000021.1 Protein Homology CDS 3731 4096 . + 0 ID=cds-WP_000028882.1;Parent=gene-CCO53_RS22855;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=CCO53_RS22855;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 4414 8442 . + . ID=gene-CCO53_RS22860;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CCO53_RS22860;old_locus_tag=CCO53_22815 NZ_NPLZ01000021.1 Protein Homology CDS 4414 8442 . + 0 ID=cds-WP_000263105.1;Parent=gene-CCO53_RS22860;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=CCO53_RS22860;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 8519 12742 . + . ID=gene-CCO53_RS22865;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CCO53_RS22865;old_locus_tag=CCO53_22820 NZ_NPLZ01000021.1 Protein Homology CDS 8519 12742 . + 0 ID=cds-WP_000653965.1;Parent=gene-CCO53_RS22865;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=CCO53_RS22865;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 12784 13110 . + . ID=gene-CCO53_RS22870;Name=CCO53_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22870;old_locus_tag=CCO53_22825 NZ_NPLZ01000021.1 Protein Homology CDS 12784 13110 . + 0 ID=cds-WP_077906257.1;Parent=gene-CCO53_RS22870;Dbxref=GenBank:WP_077906257.1;Name=WP_077906257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=CCO53_RS22870;product=hypothetical protein;protein_id=WP_077906257.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq pseudogene 13116 13456 . - . ID=gene-CCO53_RS22875;Name=CCO53_RS22875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS22875;old_locus_tag=CCO53_22830;partial=true;pseudo=true;start_range=.,13116 NZ_NPLZ01000021.1 Protein Homology CDS 13116 13456 . - 0 ID=cds-CCO53_RS22875;Parent=gene-CCO53_RS22875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=CCO53_RS22875;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,13116;transl_table=11 NZ_NPLZ01000021.1 RefSeq pseudogene 13894 13974 . - . ID=gene-CCO53_RS23790;Name=CCO53_RS23790;end_range=13974,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23790;partial=true;pseudo=true NZ_NPLZ01000021.1 Protein Homology CDS 13894 13974 . - 0 ID=cds-CCO53_RS23790;Parent=gene-CCO53_RS23790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13974,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168157.1;locus_tag=CCO53_RS23790;partial=true;product=PTS lactose/cellobiose transporter subunit IIA;pseudo=true;transl_table=11 NZ_NPLZ01000021.1 RefSeq pseudogene 14012 15210 . - . ID=gene-CCO53_RS22880;Name=CCO53_RS22880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS22880;old_locus_tag=CCO53_22835;pseudo=true NZ_NPLZ01000021.1 Protein Homology CDS 14012 15210 . - 0 ID=cds-CCO53_RS22880;Parent=gene-CCO53_RS22880;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO53_RS22880;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 15311 15988 . - . ID=gene-CCO53_RS22885;Name=CCO53_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22885;old_locus_tag=CCO53_22840 NZ_NPLZ01000021.1 Protein Homology CDS 15311 15988 . - 0 ID=cds-WP_139775347.1;Parent=gene-CCO53_RS22885;Dbxref=GenBank:WP_139775347.1;Name=WP_139775347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609745.1;locus_tag=CCO53_RS22885;product=NleE/OspZ family T3SS effector cysteine methyltransferase;protein_id=WP_139775347.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq pseudogene 16361 16551 . + . ID=gene-CCO53_RS24290;Name=CCO53_RS24290;end_range=16551,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24290;old_locus_tag=CCO53_22845;partial=true;pseudo=true NZ_NPLZ01000021.1 Protein Homology CDS 16361 16551 . + 0 ID=cds-CCO53_RS24290;Parent=gene-CCO53_RS24290;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16551,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=CCO53_RS24290;partial=true;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 16800 17039 . + . ID=gene-CCO53_RS23800;Name=CCO53_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23800 NZ_NPLZ01000021.1 GeneMarkS-2+ CDS 16800 17039 . + 0 ID=cds-WP_125855795.1;Parent=gene-CCO53_RS23800;Dbxref=GenBank:WP_125855795.1;Name=WP_125855795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS23800;product=hypothetical protein;protein_id=WP_125855795.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq pseudogene 17452 17559 . - . ID=gene-CCO53_RS24460;Name=CCO53_RS24460;end_range=17559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24460;partial=true;pseudo=true NZ_NPLZ01000021.1 Protein Homology CDS 17452 17559 . - 0 ID=cds-CCO53_RS24460;Parent=gene-CCO53_RS24460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=17559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=CCO53_RS24460;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_NPLZ01000021.1 RefSeq pseudogene 17542 17727 . + . ID=gene-CCO53_RS22895;Name=CCO53_RS22895;end_range=17727,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS22895;old_locus_tag=CCO53_22850;partial=true;pseudo=true NZ_NPLZ01000021.1 Protein Homology CDS 17542 17727 . + 0 ID=cds-CCO53_RS22895;Parent=gene-CCO53_RS22895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=CCO53_RS22895;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 17881 19014 . - . ID=gene-CCO53_RS22900;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=CCO53_RS22900;old_locus_tag=CCO53_22855 NZ_NPLZ01000021.1 Protein Homology CDS 17881 19014 . - 0 ID=cds-WP_058331979.1;Parent=gene-CCO53_RS22900;Dbxref=GenBank:WP_058331979.1;Name=WP_058331979.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=CCO53_RS22900;product=2-iminoacetate synthase ThiH;protein_id=WP_058331979.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 19011 19781 . - . ID=gene-CCO53_RS22905;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=CCO53_RS22905;old_locus_tag=CCO53_22860 NZ_NPLZ01000021.1 Protein Homology CDS 19011 19781 . - 0 ID=cds-WP_042949905.1;Parent=gene-CCO53_RS22905;Dbxref=GenBank:WP_042949905.1;Name=WP_042949905.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=CCO53_RS22905;product=thiazole synthase;protein_id=WP_042949905.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 19783 19983 . - . ID=gene-CCO53_RS22910;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CCO53_RS22910;old_locus_tag=CCO53_22865 NZ_NPLZ01000021.1 Protein Homology CDS 19783 19983 . - 0 ID=cds-WP_058331980.1;Parent=gene-CCO53_RS22910;Dbxref=GenBank:WP_058331980.1;Name=WP_058331980.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=CCO53_RS22910;product=sulfur carrier protein ThiS;protein_id=WP_058331980.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 19964 20722 . - . ID=gene-CCO53_RS22915;Name=CCO53_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22915;old_locus_tag=CCO53_22870 NZ_NPLZ01000021.1 Protein Homology CDS 19964 20722 . - 0 ID=cds-WP_058331981.1;Parent=gene-CCO53_RS22915;Dbxref=GenBank:WP_058331981.1;Name=WP_058331981.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=CCO53_RS22915;product=HesA/MoeB/ThiF family protein;protein_id=WP_058331981.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 20715 21350 . - . ID=gene-CCO53_RS22920;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CCO53_RS22920;old_locus_tag=CCO53_22875 NZ_NPLZ01000021.1 Protein Homology CDS 20715 21350 . - 0 ID=cds-WP_080160610.1;Parent=gene-CCO53_RS22920;Dbxref=GenBank:WP_080160610.1;Name=WP_080160610.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=CCO53_RS22920;product=thiamine phosphate synthase;protein_id=WP_080160610.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 21350 23245 . - . ID=gene-CCO53_RS22925;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CCO53_RS22925;old_locus_tag=CCO53_22880 NZ_NPLZ01000021.1 Protein Homology CDS 21350 23245 . - 0 ID=cds-WP_080160609.1;Parent=gene-CCO53_RS22925;Dbxref=GenBank:WP_080160609.1;Name=WP_080160609.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541272.1;locus_tag=CCO53_RS22925;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_080160609.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 23609 24097 . - . ID=gene-CCO53_RS22930;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=CCO53_RS22930;old_locus_tag=CCO53_22885 NZ_NPLZ01000021.1 Protein Homology CDS 23609 24097 . - 0 ID=cds-WP_000934315.1;Parent=gene-CCO53_RS22930;Dbxref=GenBank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=CCO53_RS22930;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 24190 24963 . + . ID=gene-CCO53_RS22935;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=CCO53_RS22935;old_locus_tag=CCO53_22890 NZ_NPLZ01000021.1 Protein Homology CDS 24190 24963 . + 0 ID=cds-WP_000373958.1;Parent=gene-CCO53_RS22935;Dbxref=GenBank:WP_000373958.1;Name=WP_000373958.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=CCO53_RS22935;product=NAD(+) diphosphatase;protein_id=WP_000373958.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 25004 26068 . + . ID=gene-CCO53_RS22940;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CCO53_RS22940;old_locus_tag=CCO53_22895 NZ_NPLZ01000021.1 Protein Homology CDS 25004 26068 . + 0 ID=cds-WP_000137629.1;Parent=gene-CCO53_RS22940;Dbxref=GenBank:WP_000137629.1;Name=WP_000137629.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=CCO53_RS22940;product=uroporphyrinogen decarboxylase;protein_id=WP_000137629.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 26078 26749 . + . ID=gene-CCO53_RS22945;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=CCO53_RS22945;old_locus_tag=CCO53_22900 NZ_NPLZ01000021.1 Protein Homology CDS 26078 26749 . + 0 ID=cds-WP_000362363.1;Parent=gene-CCO53_RS22945;Dbxref=GenBank:WP_000362363.1;Name=WP_000362363.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=CCO53_RS22945;product=deoxyribonuclease V;protein_id=WP_000362363.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 26791 27381 . + . ID=gene-CCO53_RS22950;Name=CCO53_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22950;old_locus_tag=CCO53_22905 NZ_NPLZ01000021.1 Protein Homology CDS 26791 27381 . + 0 ID=cds-WP_000940092.1;Parent=gene-CCO53_RS22950;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=CCO53_RS22950;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 27568 27840 . + . ID=gene-CCO53_RS22955;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=CCO53_RS22955;old_locus_tag=CCO53_22910 NZ_NPLZ01000021.1 Protein Homology CDS 27568 27840 . + 0 ID=cds-WP_001044509.1;Parent=gene-CCO53_RS22955;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=CCO53_RS22955;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 27852 28544 . + . ID=gene-CCO53_RS22960;Name=CCO53_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22960;old_locus_tag=CCO53_22915 NZ_NPLZ01000021.1 Protein Homology CDS 27852 28544 . + 0 ID=cds-WP_001083931.1;Parent=gene-CCO53_RS22960;Dbxref=GenBank:WP_001083931.1;Name=WP_001083931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=CCO53_RS22960;product=DUF1481 domain-containing protein;protein_id=WP_001083931.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 28586 29041 . - . ID=gene-CCO53_RS22965;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=CCO53_RS22965;old_locus_tag=CCO53_22920 NZ_NPLZ01000021.1 Protein Homology CDS 28586 29041 . - 0 ID=cds-WP_000828129.1;Parent=gene-CCO53_RS22965;Dbxref=GenBank:WP_000828129.1;Name=WP_000828129.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=CCO53_RS22965;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828129.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 29295 30692 . + . ID=gene-CCO53_RS22970;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=CCO53_RS22970;old_locus_tag=CCO53_22925 NZ_NPLZ01000021.1 Protein Homology CDS 29295 30692 . + 0 ID=cds-WP_001535057.1;Parent=gene-CCO53_RS22970;Dbxref=GenBank:WP_001535057.1;Name=WP_001535057.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=CCO53_RS22970;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001535057.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 30698 32023 . + . ID=gene-CCO53_RS22975;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=CCO53_RS22975;old_locus_tag=CCO53_22930 NZ_NPLZ01000021.1 Protein Homology CDS 30698 32023 . + 0 ID=cds-WP_000617936.1;Parent=gene-CCO53_RS22975;Dbxref=GenBank:WP_000617936.1;Name=WP_000617936.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=CCO53_RS22975;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000617936.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 32020 33309 . - . ID=gene-CCO53_RS22980;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CCO53_RS22980;old_locus_tag=CCO53_22935 NZ_NPLZ01000021.1 Protein Homology CDS 32020 33309 . - 0 ID=cds-WP_000866776.1;Parent=gene-CCO53_RS22980;Dbxref=GenBank:WP_000866776.1;Name=WP_000866776.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=CCO53_RS22980;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866776.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 33325 34914 . - . ID=gene-CCO53_RS22985;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CCO53_RS22985;old_locus_tag=CCO53_22940 NZ_NPLZ01000021.1 Protein Homology CDS 33325 34914 . - 0 ID=cds-WP_061371961.1;Parent=gene-CCO53_RS22985;Dbxref=GenBank:WP_061371961.1;Name=WP_061371961.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=CCO53_RS22985;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_061371961.1;transl_table=11 NZ_NPLZ01000021.1 RefSeq gene 35540 35759 . + . ID=gene-CCO53_RS22990;Name=CCO53_RS22990;end_range=35759,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS22990;old_locus_tag=CCO53_22945;partial=true NZ_NPLZ01000021.1 cmsearch rRNA 35540 35759 . + . ID=rna-CCO53_RS22990;Parent=gene-CCO53_RS22990;Dbxref=RFAM:RF00177;end_range=35759,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS22990;partial=true;product=16S ribosomal RNA NZ_NPLZ01000021.1 cmsearch exon 35540 35759 . + . ID=exon-CCO53_RS22990-1;Parent=rna-CCO53_RS22990;Dbxref=RFAM:RF00177;end_range=35759,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS22990;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPLZ01000022.1 1 26411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000022.1 RefSeq region 1 26411 . + . ID=NZ_NPLZ01000022.1:1..26411;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000022.1 RefSeq gene 299 853 . + . ID=gene-CCO53_RS22995;Name=CCO53_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS22995;old_locus_tag=CCO53_22950 NZ_NPLZ01000022.1 Protein Homology CDS 299 853 . + 0 ID=cds-WP_001285631.1;Parent=gene-CCO53_RS22995;Dbxref=GenBank:WP_001285631.1;Name=WP_001285631.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=CCO53_RS22995;product=gamma carbonic anhydrase family protein;protein_id=WP_001285631.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 829 1086 . - . ID=gene-CCO53_RS23000;Name=CCO53_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23000;old_locus_tag=CCO53_22955 NZ_NPLZ01000022.1 Protein Homology CDS 829 1086 . - 0 ID=cds-WP_001070571.1;Parent=gene-CCO53_RS23000;Dbxref=GenBank:WP_001070571.1;Name=WP_001070571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=CCO53_RS23000;product=DUF1488 domain-containing protein;protein_id=WP_001070571.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 1083 1901 . - . ID=gene-CCO53_RS23005;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CCO53_RS23005;old_locus_tag=CCO53_22960 NZ_NPLZ01000022.1 Protein Homology CDS 1083 1901 . - 0 ID=cds-WP_000451194.1;Parent=gene-CCO53_RS23005;Dbxref=GenBank:WP_000451194.1;Name=WP_000451194.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=CCO53_RS23005;product=shikimate dehydrogenase;protein_id=WP_000451194.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 1906 2478 . - . ID=gene-CCO53_RS23010;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=CCO53_RS23010;old_locus_tag=CCO53_22965 NZ_NPLZ01000022.1 Protein Homology CDS 1906 2478 . - 0 ID=cds-WP_001063613.1;Parent=gene-CCO53_RS23010;Dbxref=GenBank:WP_001063613.1;Name=WP_001063613.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=CCO53_RS23010;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063613.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 2483 3025 . - . ID=gene-CCO53_RS23015;Name=CCO53_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23015;old_locus_tag=CCO53_22970 NZ_NPLZ01000022.1 Protein Homology CDS 2483 3025 . - 0 ID=cds-WP_023201535.1;Parent=gene-CCO53_RS23015;Dbxref=GenBank:WP_023201535.1;Name=WP_023201535.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=CCO53_RS23015;product=DNA topoisomerase family protein;protein_id=WP_023201535.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 3052 3525 . - . ID=gene-CCO53_RS23020;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=CCO53_RS23020;old_locus_tag=CCO53_22975 NZ_NPLZ01000022.1 Protein Homology CDS 3052 3525 . - 0 ID=cds-WP_000460663.1;Parent=gene-CCO53_RS23020;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=CCO53_RS23020;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 3497 4621 . - . ID=gene-CCO53_RS23025;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CCO53_RS23025;old_locus_tag=CCO53_22980 NZ_NPLZ01000022.1 Protein Homology CDS 3497 4621 . - 0 ID=cds-WP_058331627.1;Parent=gene-CCO53_RS23025;Dbxref=GenBank:WP_058331627.1;Name=WP_058331627.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=CCO53_RS23025;product=DNA-protecting protein DprA;protein_id=WP_058331627.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 4753 5262 . + . ID=gene-CCO53_RS23030;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CCO53_RS23030;old_locus_tag=CCO53_22985 NZ_NPLZ01000022.1 Protein Homology CDS 4753 5262 . + 0 ID=cds-WP_000114987.1;Parent=gene-CCO53_RS23030;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=CCO53_RS23030;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 5278 6225 . + . ID=gene-CCO53_RS23035;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CCO53_RS23035;old_locus_tag=CCO53_22990 NZ_NPLZ01000022.1 Protein Homology CDS 5278 6225 . + 0 ID=cds-WP_001285165.1;Parent=gene-CCO53_RS23035;Dbxref=GenBank:WP_001285165.1;Name=WP_001285165.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=CCO53_RS23035;product=methionyl-tRNA formyltransferase;protein_id=WP_001285165.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 6277 7566 . + . ID=gene-CCO53_RS23040;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CCO53_RS23040;old_locus_tag=CCO53_22995 NZ_NPLZ01000022.1 Protein Homology CDS 6277 7566 . + 0 ID=cds-WP_058331626.1;Parent=gene-CCO53_RS23040;Dbxref=GenBank:WP_058331626.1;Name=WP_058331626.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=CCO53_RS23040;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_058331626.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 7588 8964 . + . ID=gene-CCO53_RS23045;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=CCO53_RS23045;old_locus_tag=CCO53_23000 NZ_NPLZ01000022.1 Protein Homology CDS 7588 8964 . + 0 ID=cds-WP_000691374.1;Parent=gene-CCO53_RS23045;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=CCO53_RS23045;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 9106 9519 . + . ID=gene-CCO53_RS23050;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CCO53_RS23050;old_locus_tag=CCO53_23005 NZ_NPLZ01000022.1 Protein Homology CDS 9106 9519 . + 0 ID=cds-WP_000008119.1;Parent=gene-CCO53_RS23050;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=CCO53_RS23050;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq pseudogene 9521 9724 . - . ID=gene-CCO53_RS23055;Name=CCO53_RS23055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23055;old_locus_tag=CCO53_23010;partial=true;pseudo=true;start_range=.,9521 NZ_NPLZ01000022.1 Protein Homology CDS 9521 9724 . - 0 ID=cds-CCO53_RS23055;Parent=gene-CCO53_RS23055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=CCO53_RS23055;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;start_range=.,9521;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 9782 10207 . - . ID=gene-CCO53_RS23060;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=CCO53_RS23060;old_locus_tag=CCO53_23015 NZ_NPLZ01000022.1 Protein Homology CDS 9782 10207 . - 0 ID=cds-WP_000285588.1;Parent=gene-CCO53_RS23060;Dbxref=GenBank:WP_000285588.1;Name=WP_000285588.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=CCO53_RS23060;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285588.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 10218 10586 . - . ID=gene-CCO53_RS23065;Name=CCO53_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23065;old_locus_tag=CCO53_23020 NZ_NPLZ01000022.1 Protein Homology CDS 10218 10586 . - 0 ID=cds-WP_000266511.1;Parent=gene-CCO53_RS23065;Dbxref=GenBank:WP_000266511.1;Name=WP_000266511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=CCO53_RS23065;product=DUF1992 domain-containing protein;protein_id=WP_000266511.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 10694 11077 . - . ID=gene-CCO53_RS23070;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CCO53_RS23070;old_locus_tag=CCO53_23025 NZ_NPLZ01000022.1 Protein Homology CDS 10694 11077 . - 0 ID=cds-WP_001216370.1;Parent=gene-CCO53_RS23070;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=CCO53_RS23070;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 11118 12107 . - . ID=gene-CCO53_RS23075;Name=CCO53_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23075;old_locus_tag=CCO53_23030 NZ_NPLZ01000022.1 Protein Homology CDS 11118 12107 . - 0 ID=cds-WP_001162094.1;Parent=gene-CCO53_RS23075;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=CCO53_RS23075;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 12133 12753 . - . ID=gene-CCO53_RS23080;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CCO53_RS23080;old_locus_tag=CCO53_23035 NZ_NPLZ01000022.1 Protein Homology CDS 12133 12753 . - 0 ID=cds-WP_000135226.1;Parent=gene-CCO53_RS23080;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=CCO53_RS23080;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 12787 13176 . - . ID=gene-CCO53_RS23085;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CCO53_RS23085;old_locus_tag=CCO53_23040 NZ_NPLZ01000022.1 Protein Homology CDS 12787 13176 . - 0 ID=cds-WP_001029758.1;Parent=gene-CCO53_RS23085;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=CCO53_RS23085;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 13193 13549 . - . ID=gene-CCO53_RS23090;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CCO53_RS23090;old_locus_tag=CCO53_23045 NZ_NPLZ01000022.1 Protein Homology CDS 13193 13549 . - 0 ID=cds-WP_000090780.1;Parent=gene-CCO53_RS23090;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=CCO53_RS23090;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 13696 13812 . - . ID=gene-CCO53_RS23095;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CCO53_RS23095;old_locus_tag=CCO53_23050 NZ_NPLZ01000022.1 Protein Homology CDS 13696 13812 . - 0 ID=cds-WP_000868187.1;Parent=gene-CCO53_RS23095;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=CCO53_RS23095;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 13844 15175 . - . ID=gene-CCO53_RS23100;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CCO53_RS23100;old_locus_tag=CCO53_23055 NZ_NPLZ01000022.1 Protein Homology CDS 13844 15175 . - 0 ID=cds-WP_001118864.1;Parent=gene-CCO53_RS23100;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=CCO53_RS23100;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 15183 15617 . - . ID=gene-CCO53_RS23105;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CCO53_RS23105;old_locus_tag=CCO53_23060 NZ_NPLZ01000022.1 Protein Homology CDS 15183 15617 . - 0 ID=cds-WP_001238917.1;Parent=gene-CCO53_RS23105;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=CCO53_RS23105;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 15621 15800 . - . ID=gene-CCO53_RS23110;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CCO53_RS23110;old_locus_tag=CCO53_23065 NZ_NPLZ01000022.1 Protein Homology CDS 15621 15800 . - 0 ID=cds-WP_001140434.1;Parent=gene-CCO53_RS23110;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=CCO53_RS23110;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 15804 16307 . - . ID=gene-CCO53_RS23115;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CCO53_RS23115;old_locus_tag=CCO53_23070 NZ_NPLZ01000022.1 Protein Homology CDS 15804 16307 . - 0 ID=cds-WP_000940121.1;Parent=gene-CCO53_RS23115;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=CCO53_RS23115;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 16322 16675 . - . ID=gene-CCO53_RS23120;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CCO53_RS23120;old_locus_tag=CCO53_23075 NZ_NPLZ01000022.1 Protein Homology CDS 16322 16675 . - 0 ID=cds-WP_000358956.1;Parent=gene-CCO53_RS23120;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=CCO53_RS23120;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 16685 17218 . - . ID=gene-CCO53_RS23125;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CCO53_RS23125;old_locus_tag=CCO53_23080 NZ_NPLZ01000022.1 Protein Homology CDS 16685 17218 . - 0 ID=cds-WP_000091939.1;Parent=gene-CCO53_RS23125;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=CCO53_RS23125;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 17231 17623 . - . ID=gene-CCO53_RS23130;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CCO53_RS23130;old_locus_tag=CCO53_23085 NZ_NPLZ01000022.1 Protein Homology CDS 17231 17623 . - 0 ID=cds-WP_000062611.1;Parent=gene-CCO53_RS23130;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=CCO53_RS23130;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 17657 17962 . - . ID=gene-CCO53_RS23135;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CCO53_RS23135;old_locus_tag=CCO53_23090 NZ_NPLZ01000022.1 Protein Homology CDS 17657 17962 . - 0 ID=cds-WP_001118932.1;Parent=gene-CCO53_RS23135;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=CCO53_RS23135;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 17977 18516 . - . ID=gene-CCO53_RS23140;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CCO53_RS23140;old_locus_tag=CCO53_23095 NZ_NPLZ01000022.1 Protein Homology CDS 17977 18516 . - 0 ID=cds-WP_001096206.1;Parent=gene-CCO53_RS23140;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=CCO53_RS23140;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 18531 18845 . - . ID=gene-CCO53_RS23145;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CCO53_RS23145;old_locus_tag=CCO53_23100 NZ_NPLZ01000022.1 Protein Homology CDS 18531 18845 . - 0 ID=cds-WP_000729185.1;Parent=gene-CCO53_RS23145;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=CCO53_RS23145;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 18856 19227 . - . ID=gene-CCO53_RS23150;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CCO53_RS23150;old_locus_tag=CCO53_23105 NZ_NPLZ01000022.1 Protein Homology CDS 18856 19227 . - 0 ID=cds-WP_000613954.1;Parent=gene-CCO53_RS23150;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=CCO53_RS23150;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 19391 19645 . - . ID=gene-CCO53_RS23155;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CCO53_RS23155;old_locus_tag=CCO53_23110 NZ_NPLZ01000022.1 Protein Homology CDS 19391 19645 . - 0 ID=cds-WP_000130101.1;Parent=gene-CCO53_RS23155;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=CCO53_RS23155;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 19645 19836 . - . ID=gene-CCO53_RS23160;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CCO53_RS23160;old_locus_tag=CCO53_23115 NZ_NPLZ01000022.1 Protein Homology CDS 19645 19836 . - 0 ID=cds-WP_000644742.1;Parent=gene-CCO53_RS23160;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=CCO53_RS23160;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 19836 20246 . - . ID=gene-CCO53_RS23165;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CCO53_RS23165;old_locus_tag=CCO53_23120 NZ_NPLZ01000022.1 Protein Homology CDS 19836 20246 . - 0 ID=cds-WP_000941208.1;Parent=gene-CCO53_RS23165;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=CCO53_RS23165;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 20259 20960 . - . ID=gene-CCO53_RS23170;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CCO53_RS23170;old_locus_tag=CCO53_23125 NZ_NPLZ01000022.1 Protein Homology CDS 20259 20960 . - 0 ID=cds-WP_000529945.1;Parent=gene-CCO53_RS23170;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=CCO53_RS23170;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 20978 21310 . - . ID=gene-CCO53_RS23175;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CCO53_RS23175;old_locus_tag=CCO53_23130 NZ_NPLZ01000022.1 Protein Homology CDS 20978 21310 . - 0 ID=cds-WP_000447529.1;Parent=gene-CCO53_RS23175;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=CCO53_RS23175;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 21325 21603 . - . ID=gene-CCO53_RS23180;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CCO53_RS23180;old_locus_tag=CCO53_23135 NZ_NPLZ01000022.1 Protein Homology CDS 21325 21603 . - 0 ID=cds-WP_001138115.1;Parent=gene-CCO53_RS23180;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=CCO53_RS23180;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 21620 22441 . - . ID=gene-CCO53_RS23185;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CCO53_RS23185;old_locus_tag=CCO53_23140 NZ_NPLZ01000022.1 Protein Homology CDS 21620 22441 . - 0 ID=cds-WP_000301869.1;Parent=gene-CCO53_RS23185;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=CCO53_RS23185;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 22459 22761 . - . ID=gene-CCO53_RS23190;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CCO53_RS23190;old_locus_tag=CCO53_23145 NZ_NPLZ01000022.1 Protein Homology CDS 22459 22761 . - 0 ID=cds-WP_000617546.1;Parent=gene-CCO53_RS23190;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=CCO53_RS23190;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 22758 23363 . - . ID=gene-CCO53_RS23195;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CCO53_RS23195;old_locus_tag=CCO53_23150 NZ_NPLZ01000022.1 Protein Homology CDS 22758 23363 . - 0 ID=cds-WP_000424395.1;Parent=gene-CCO53_RS23195;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=CCO53_RS23195;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 23374 24003 . - . ID=gene-CCO53_RS23200;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CCO53_RS23200;old_locus_tag=CCO53_23155 NZ_NPLZ01000022.1 Protein Homology CDS 23374 24003 . - 0 ID=cds-WP_000579838.1;Parent=gene-CCO53_RS23200;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=CCO53_RS23200;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 24036 24347 . - . ID=gene-CCO53_RS23205;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CCO53_RS23205;old_locus_tag=CCO53_23160 NZ_NPLZ01000022.1 Protein Homology CDS 24036 24347 . - 0 ID=cds-WP_001181005.1;Parent=gene-CCO53_RS23205;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=CCO53_RS23205;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 24727 25194 . + . ID=gene-CCO53_RS23215;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=CCO53_RS23215;old_locus_tag=CCO53_23170 NZ_NPLZ01000022.1 Protein Homology CDS 24727 25194 . + 0 ID=cds-WP_058331623.1;Parent=gene-CCO53_RS23215;Dbxref=GenBank:WP_058331623.1;Name=WP_058331623.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=CCO53_RS23215;product=prepilin peptidase;protein_id=WP_058331623.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 25191 25667 . - . ID=gene-CCO53_RS23220;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=CCO53_RS23220;old_locus_tag=CCO53_23175 NZ_NPLZ01000022.1 Protein Homology CDS 25191 25667 . - 0 ID=cds-WP_000675530.1;Parent=gene-CCO53_RS23220;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=CCO53_RS23220;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq gene 25740 25934 . - . ID=gene-CCO53_RS23225;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=CCO53_RS23225;old_locus_tag=CCO53_23180 NZ_NPLZ01000022.1 Protein Homology CDS 25740 25934 . - 0 ID=cds-WP_000289082.1;Parent=gene-CCO53_RS23225;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=CCO53_RS23225;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11 NZ_NPLZ01000022.1 RefSeq pseudogene 26119 26411 . - . ID=gene-CCO53_RS23240;Name=tuf;end_range=26411,.;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO53_RS23240;old_locus_tag=CCO53_23195;partial=true;pseudo=true NZ_NPLZ01000022.1 Protein Homology CDS 26119 26411 . - 2 ID=cds-CCO53_RS23240;Parent=gene-CCO53_RS23240;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=26411,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO53_RS23240;partial=true;product=elongation factor Tu;pseudo=true;transl_table=11 ##sequence-region NZ_NPLZ01000023.1 1 11430 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000023.1 RefSeq region 1 11430 . + . ID=NZ_NPLZ01000023.1:1..11430;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000023.1 RefSeq gene 568 1362 . - . ID=gene-CCO53_RS23245;Name=CCO53_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23245;old_locus_tag=CCO53_23200 NZ_NPLZ01000023.1 Protein Homology CDS 568 1362 . - 0 ID=cds-WP_000246207.1;Parent=gene-CCO53_RS23245;Dbxref=GenBank:WP_000246207.1;Name=WP_000246207.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246207.1;locus_tag=CCO53_RS23245;product=IclR family transcriptional regulator;protein_id=WP_000246207.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 1480 2352 . + . ID=gene-CCO53_RS23250;Name=CCO53_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23250;old_locus_tag=CCO53_23205 NZ_NPLZ01000023.1 Protein Homology CDS 1480 2352 . + 0 ID=cds-WP_023201554.1;Parent=gene-CCO53_RS23250;Dbxref=GenBank:WP_023201554.1;Name=WP_023201554.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521142.1;locus_tag=CCO53_RS23250;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_023201554.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 2355 3365 . + . ID=gene-CCO53_RS23255;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=CCO53_RS23255;old_locus_tag=CCO53_23210 NZ_NPLZ01000023.1 Protein Homology CDS 2355 3365 . + 0 ID=cds-WP_000932712.1;Parent=gene-CCO53_RS23255;Dbxref=GenBank:WP_000932712.1;Name=WP_000932712.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932712.1;locus_tag=CCO53_RS23255;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_000932712.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 3451 3717 . + . ID=gene-CCO53_RS23260;Name=CCO53_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23260;old_locus_tag=CCO53_23215 NZ_NPLZ01000023.1 Protein Homology CDS 3451 3717 . + 0 ID=cds-WP_094887848.1;Parent=gene-CCO53_RS23260;Dbxref=GenBank:WP_094887848.1;Name=WP_094887848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663244.1;locus_tag=CCO53_RS23260;product=UxaA family hydrolase;protein_id=WP_094887848.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 3744 4919 . + . ID=gene-CCO53_RS23265;Name=CCO53_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23265;old_locus_tag=CCO53_23220 NZ_NPLZ01000023.1 Protein Homology CDS 3744 4919 . + 0 ID=cds-WP_023201553.1;Parent=gene-CCO53_RS23265;Dbxref=GenBank:WP_023201553.1;Name=WP_023201553.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: protein motif:HMM:NF045169.3;locus_tag=CCO53_RS23265;product=UxaA family hydrolase;protein_id=WP_023201553.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 4957 5925 . + . ID=gene-CCO53_RS23270;Name=CCO53_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23270;old_locus_tag=CCO53_23225 NZ_NPLZ01000023.1 Protein Homology CDS 4957 5925 . + 0 ID=cds-WP_024146078.1;Parent=gene-CCO53_RS23270;Dbxref=GenBank:WP_024146078.1;Name=WP_024146078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166751.1;locus_tag=CCO53_RS23270;product=2-keto-3-deoxygluconate permease;protein_id=WP_024146078.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 5913 6818 . + . ID=gene-CCO53_RS23275;Name=CCO53_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23275;old_locus_tag=CCO53_23230 NZ_NPLZ01000023.1 Protein Homology CDS 5913 6818 . + 0 ID=cds-WP_023201551.1;Parent=gene-CCO53_RS23275;Dbxref=GenBank:WP_023201551.1;Name=WP_023201551.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007866609.1;locus_tag=CCO53_RS23275;product=dihydrodipicolinate synthase family protein;protein_id=WP_023201551.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 7214 8242 . + . ID=gene-CCO53_RS23280;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CCO53_RS23280;old_locus_tag=CCO53_23235 NZ_NPLZ01000023.1 Protein Homology CDS 7214 8242 . + 0 ID=cds-WP_000149799.1;Parent=gene-CCO53_RS23280;Dbxref=GenBank:WP_000149799.1;Name=WP_000149799.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=CCO53_RS23280;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149799.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 8239 9201 . + . ID=gene-CCO53_RS23285;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=CCO53_RS23285;old_locus_tag=CCO53_23240 NZ_NPLZ01000023.1 Protein Homology CDS 8239 9201 . + 0 ID=cds-WP_000655746.1;Parent=gene-CCO53_RS23285;Dbxref=GenBank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=CCO53_RS23285;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 9236 10186 . - . ID=gene-CCO53_RS23290;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=CCO53_RS23290;old_locus_tag=CCO53_23245 NZ_NPLZ01000023.1 Protein Homology CDS 9236 10186 . - 0 ID=cds-WP_000023069.1;Parent=gene-CCO53_RS23290;Dbxref=GenBank:WP_000023069.1;Name=WP_000023069.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=CCO53_RS23290;product=type I pantothenate kinase;protein_id=WP_000023069.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 10395 10568 . - . ID=gene-CCO53_RS23300;Name=CCO53_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23300;old_locus_tag=CCO53_23255 NZ_NPLZ01000023.1 Protein Homology CDS 10395 10568 . - 0 ID=cds-WP_001541267.1;Parent=gene-CCO53_RS23300;Dbxref=GenBank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=CCO53_RS23300;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11 NZ_NPLZ01000023.1 RefSeq gene 10588 10663 . + . ID=gene-CCO53_RS23305;Name=CCO53_RS23305;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS23305;old_locus_tag=CCO53_23260 NZ_NPLZ01000023.1 tRNAscan-SE tRNA 10588 10663 . + . ID=rna-CCO53_RS23305;Parent=gene-CCO53_RS23305;anticodon=(pos:10621..10623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23305;product=tRNA-Thr NZ_NPLZ01000023.1 tRNAscan-SE exon 10588 10663 . + . ID=exon-CCO53_RS23305-1;Parent=rna-CCO53_RS23305;anticodon=(pos:10621..10623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23305;product=tRNA-Thr NZ_NPLZ01000023.1 RefSeq gene 10672 10756 . + . ID=gene-CCO53_RS23310;Name=CCO53_RS23310;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS23310;old_locus_tag=CCO53_23265 NZ_NPLZ01000023.1 tRNAscan-SE tRNA 10672 10756 . + . ID=rna-CCO53_RS23310;Parent=gene-CCO53_RS23310;anticodon=(pos:10706..10708);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23310;product=tRNA-Tyr NZ_NPLZ01000023.1 tRNAscan-SE exon 10672 10756 . + . ID=exon-CCO53_RS23310-1;Parent=rna-CCO53_RS23310;anticodon=(pos:10706..10708);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23310;product=tRNA-Tyr NZ_NPLZ01000023.1 RefSeq gene 10873 10947 . + . ID=gene-CCO53_RS23315;Name=CCO53_RS23315;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS23315;old_locus_tag=CCO53_23270 NZ_NPLZ01000023.1 tRNAscan-SE tRNA 10873 10947 . + . ID=rna-CCO53_RS23315;Parent=gene-CCO53_RS23315;anticodon=(pos:10906..10908);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23315;product=tRNA-Gly NZ_NPLZ01000023.1 tRNAscan-SE exon 10873 10947 . + . ID=exon-CCO53_RS23315-1;Parent=rna-CCO53_RS23315;anticodon=(pos:10906..10908);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23315;product=tRNA-Gly NZ_NPLZ01000023.1 RefSeq gene 10954 11029 . + . ID=gene-CCO53_RS23320;Name=CCO53_RS23320;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS23320;old_locus_tag=CCO53_23275 NZ_NPLZ01000023.1 tRNAscan-SE tRNA 10954 11029 . + . ID=rna-CCO53_RS23320;Parent=gene-CCO53_RS23320;anticodon=(pos:10987..10989);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23320;product=tRNA-Thr NZ_NPLZ01000023.1 tRNAscan-SE exon 10954 11029 . + . ID=exon-CCO53_RS23320-1;Parent=rna-CCO53_RS23320;anticodon=(pos:10987..10989);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23320;product=tRNA-Thr NZ_NPLZ01000023.1 RefSeq gene 11145 11430 . + . ID=gene-CCO53_RS23325;Name=CCO53_RS23325;end_range=11430,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23325;old_locus_tag=CCO53_23280;partial=true NZ_NPLZ01000023.1 Protein Homology CDS 11145 11430 . + 0 ID=cds-WP_000031682.1;Parent=gene-CCO53_RS23325;Dbxref=GenBank:WP_000031682.1;Name=WP_000031682.1;Ontology_term=GO:0003924,GO:0005525;end_range=11430,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO53_RS23325;partial=true;product=GTP-binding protein;protein_id=WP_000031682.1;transl_table=11 ##sequence-region NZ_NPLZ01000024.1 1 8222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000024.1 RefSeq region 1 8222 . + . ID=NZ_NPLZ01000024.1:1..8222;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000024.1 RefSeq pseudogene 1 8222 . - . ID=gene-CCO53_RS23330;Name=siiE;end_range=8222,.;gbkey=Gene;gene=siiE;gene_biotype=pseudogene;locus_tag=CCO53_RS23330;old_locus_tag=CCO53_23285;partial=true;pseudo=true;start_range=.,1 NZ_NPLZ01000024.1 Protein Homology CDS 1 8222 . - 2 ID=cds-CCO53_RS23330;Parent=gene-CCO53_RS23330;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=8222,.;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO53_RS23330;partial=true;product=non-fimbrial adhesin SiiE;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_NPLZ01000025.1 1 6166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000025.1 RefSeq region 1 6166 . + . ID=NZ_NPLZ01000025.1:1..6166;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000025.1 RefSeq gene 1 618 . + . ID=gene-CCO53_RS23335;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO53_RS23335;old_locus_tag=CCO53_23290;partial=true;start_range=.,1 NZ_NPLZ01000025.1 Protein Homology CDS 1 618 . + 0 ID=cds-WP_053299991.1;Parent=gene-CCO53_RS23335;Dbxref=GenBank:WP_053299991.1;Name=WP_053299991.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO53_RS23335;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_053299991.1;start_range=.,1;transl_table=11 NZ_NPLZ01000025.1 RefSeq gene 615 1274 . + . ID=gene-CCO53_RS23340;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO53_RS23340;old_locus_tag=CCO53_23295 NZ_NPLZ01000025.1 Protein Homology CDS 615 1274 . + 0 ID=cds-WP_000990028.1;Parent=gene-CCO53_RS23340;Dbxref=GenBank:WP_000990028.1;Name=WP_000990028.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO53_RS23340;product=heme exporter protein CcmB;protein_id=WP_000990028.1;transl_table=11 NZ_NPLZ01000025.1 RefSeq gene 1326 2063 . + . ID=gene-CCO53_RS23345;Name=CCO53_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23345;old_locus_tag=CCO53_23300 NZ_NPLZ01000025.1 Protein Homology CDS 1326 2063 . + 0 ID=cds-WP_000265997.1;Parent=gene-CCO53_RS23345;Dbxref=GenBank:WP_000265997.1;Name=WP_000265997.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO53_RS23345;product=heme ABC transporter permease;protein_id=WP_000265997.1;transl_table=11 NZ_NPLZ01000025.1 RefSeq gene 2060 2272 . + . ID=gene-CCO53_RS23350;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=CCO53_RS23350;old_locus_tag=CCO53_23305 NZ_NPLZ01000025.1 Protein Homology CDS 2060 2272 . + 0 ID=cds-WP_000074110.1;Parent=gene-CCO53_RS23350;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=CCO53_RS23350;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11 NZ_NPLZ01000025.1 RefSeq gene 2269 2748 . + . ID=gene-CCO53_RS23355;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=CCO53_RS23355;old_locus_tag=CCO53_23310 NZ_NPLZ01000025.1 Protein Homology CDS 2269 2748 . + 0 ID=cds-WP_001053601.1;Parent=gene-CCO53_RS23355;Dbxref=GenBank:WP_001053601.1;Name=WP_001053601.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=CCO53_RS23355;product=cytochrome c maturation protein CcmE;protein_id=WP_001053601.1;transl_table=11 NZ_NPLZ01000025.1 RefSeq gene 2745 4676 . + . ID=gene-CCO53_RS23360;Name=CCO53_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23360;old_locus_tag=CCO53_23315 NZ_NPLZ01000025.1 Protein Homology CDS 2745 4676 . + 0 ID=cds-WP_094887849.1;Parent=gene-CCO53_RS23360;Dbxref=GenBank:WP_094887849.1;Name=WP_094887849.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=CCO53_RS23360;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_094887849.1;transl_table=11 NZ_NPLZ01000025.1 RefSeq gene 4673 5230 . + . ID=gene-CCO53_RS23365;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=CCO53_RS23365;old_locus_tag=CCO53_23320 NZ_NPLZ01000025.1 Protein Homology CDS 4673 5230 . + 0 ID=cds-WP_064239997.1;Parent=gene-CCO53_RS23365;Dbxref=GenBank:WP_064239997.1;Name=WP_064239997.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=CCO53_RS23365;product=thiol:disulfide interchange protein DsbE;protein_id=WP_064239997.1;transl_table=11 NZ_NPLZ01000025.1 RefSeq gene 5227 6166 . + . ID=gene-CCO53_RS23370;Name=CCO53_RS23370;end_range=6166,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23370;old_locus_tag=CCO53_23325;partial=true NZ_NPLZ01000025.1 Protein Homology CDS 5227 6166 . + 0 ID=cds-WP_094887850.1;Parent=gene-CCO53_RS23370;Dbxref=GenBank:WP_094887850.1;Name=WP_094887850.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;end_range=6166,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=CCO53_RS23370;partial=true;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_094887850.1;transl_table=11 ##sequence-region NZ_NPLZ01000026.1 1 5085 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000026.1 RefSeq region 1 5085 . + . ID=NZ_NPLZ01000026.1:1..5085;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000026.1 RefSeq gene 1 1409 . + . ID=gene-CCO53_RS23375;Name=CCO53_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23375;old_locus_tag=CCO53_23330;partial=true;start_range=.,1 NZ_NPLZ01000026.1 Protein Homology CDS 1 1409 . + 2 ID=cds-WP_140428411.1;Parent=gene-CCO53_RS23375;Dbxref=GenBank:WP_140428411.1;Name=WP_140428411.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542647.1;locus_tag=CCO53_RS23375;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_140428411.1;start_range=.,1;transl_table=11 NZ_NPLZ01000026.1 RefSeq gene 1440 1871 . + . ID=gene-CCO53_RS23380;Name=CCO53_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23380;old_locus_tag=CCO53_23335 NZ_NPLZ01000026.1 Protein Homology CDS 1440 1871 . + 0 ID=cds-WP_001199685.1;Parent=gene-CCO53_RS23380;Dbxref=GenBank:WP_001199685.1;Name=WP_001199685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199685.1;locus_tag=CCO53_RS23380;product=DcrB-related protein;protein_id=WP_001199685.1;transl_table=11 NZ_NPLZ01000026.1 RefSeq gene 1902 5085 . + . ID=gene-CCO53_RS23385;Name=CCO53_RS23385;end_range=5085,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23385;old_locus_tag=CCO53_23340;partial=true NZ_NPLZ01000026.1 Protein Homology CDS 1902 5085 . + 0 ID=cds-WP_094887851.1;Parent=gene-CCO53_RS23385;Dbxref=GenBank:WP_094887851.1;Name=WP_094887851.1;end_range=5085,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402129.1;locus_tag=CCO53_RS23385;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_094887851.1;transl_table=11 ##sequence-region NZ_NPLZ01000027.1 1 3609 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000027.1 RefSeq region 1 3609 . + . ID=NZ_NPLZ01000027.1:1..3609;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000027.1 RefSeq gene 1 968 . + . ID=gene-CCO53_RS23390;Name=CCO53_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23390;old_locus_tag=CCO53_23345;partial=true;start_range=.,1 NZ_NPLZ01000027.1 Protein Homology CDS 1 968 . + 2 ID=cds-WP_272897678.1;Parent=gene-CCO53_RS23390;Dbxref=GenBank:WP_272897678.1;Name=WP_272897678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555574.1;locus_tag=CCO53_RS23390;partial=true;product=HNH/endonuclease VII fold putative polymorphic toxin;protein_id=WP_272897678.1;start_range=.,1;transl_table=11 NZ_NPLZ01000027.1 RefSeq gene 979 1356 . + . ID=gene-CCO53_RS23395;Name=CCO53_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23395;old_locus_tag=CCO53_23350 NZ_NPLZ01000027.1 Protein Homology CDS 979 1356 . + 0 ID=cds-WP_023214856.1;Parent=gene-CCO53_RS23395;Dbxref=GenBank:WP_023214856.1;Name=WP_023214856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289912.1;locus_tag=CCO53_RS23395;product=Imm50 family immunity protein;protein_id=WP_023214856.1;transl_table=11 NZ_NPLZ01000027.1 RefSeq gene 1609 2025 . + . ID=gene-CCO53_RS23400;Name=CCO53_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23400;old_locus_tag=CCO53_23355 NZ_NPLZ01000027.1 Protein Homology CDS 1609 2025 . + 0 ID=cds-WP_001596567.1;Parent=gene-CCO53_RS23400;Dbxref=GenBank:WP_001596567.1;Name=WP_001596567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=CCO53_RS23400;product=DUF2195 family protein;protein_id=WP_001596567.1;transl_table=11 NZ_NPLZ01000027.1 RefSeq gene 2049 2570 . + . ID=gene-CCO53_RS23405;Name=CCO53_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23405;old_locus_tag=CCO53_23360 NZ_NPLZ01000027.1 Protein Homology CDS 2049 2570 . + 0 ID=cds-WP_000968384.1;Parent=gene-CCO53_RS23405;Dbxref=GenBank:WP_000968384.1;Name=WP_000968384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=CCO53_RS23405;product=DUF2778 domain-containing protein;protein_id=WP_000968384.1;transl_table=11 NZ_NPLZ01000027.1 RefSeq gene 2967 3609 . + . ID=gene-CCO53_RS23415;Name=CCO53_RS23415;end_range=3609,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23415;old_locus_tag=CCO53_23370;partial=true NZ_NPLZ01000027.1 Protein Homology CDS 2967 3609 . + 0 ID=cds-WP_272897189.1;Parent=gene-CCO53_RS23415;Dbxref=GenBank:WP_272897189.1;Name=WP_272897189.1;end_range=3609,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=CCO53_RS23415;partial=true;product=phage late control D family protein;protein_id=WP_272897189.1;transl_table=11 ##sequence-region NZ_NPLZ01000028.1 1 2584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000028.1 RefSeq region 1 2584 . + . ID=NZ_NPLZ01000028.1:1..2584;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000028.1 RefSeq gene 1 1091 . + . ID=gene-CCO53_RS24205;Name=CCO53_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24205;partial=true;start_range=.,1 NZ_NPLZ01000028.1 Protein Homology CDS 1 1091 . + 2 ID=cds-WP_272897679.1;Parent=gene-CCO53_RS24205;Dbxref=GenBank:WP_272897679.1;Name=WP_272897679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542648.1;locus_tag=CCO53_RS24205;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_272897679.1;start_range=.,1;transl_table=11 NZ_NPLZ01000028.1 RefSeq gene 1091 1540 . + . ID=gene-CCO53_RS23425;Name=CCO53_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23425;old_locus_tag=CCO53_23380 NZ_NPLZ01000028.1 GeneMarkS-2+ CDS 1091 1540 . + 0 ID=cds-WP_058331200.1;Parent=gene-CCO53_RS23425;Dbxref=GenBank:WP_058331200.1;Name=WP_058331200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS23425;product=hypothetical protein;protein_id=WP_058331200.1;transl_table=11 NZ_NPLZ01000028.1 RefSeq gene 1744 2193 . - . ID=gene-CCO53_RS24150;Name=CCO53_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24150 NZ_NPLZ01000028.1 Protein Homology CDS 1744 2193 . - 0 ID=cds-WP_237141200.1;Parent=gene-CCO53_RS24150;Dbxref=GenBank:WP_237141200.1;Name=WP_237141200.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662352.1;locus_tag=CCO53_RS24150;product=SymE family type I addiction module toxin;protein_id=WP_237141200.1;transl_table=11 ##sequence-region NZ_NPLZ01000029.1 1 2387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000029.1 RefSeq region 1 2387 . + . ID=NZ_NPLZ01000029.1:1..2387;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000029.1 RefSeq gene 1 250 . - . ID=gene-CCO53_RS23435;Name=CCO53_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23435;old_locus_tag=CCO53_23390;partial=true;start_range=.,1 NZ_NPLZ01000029.1 GeneMarkS-2+ CDS 1 250 . - 0 ID=cds-WP_237141208.1;Parent=gene-CCO53_RS23435;Dbxref=GenBank:WP_237141208.1;Name=WP_237141208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS23435;partial=true;product=hypothetical protein;protein_id=WP_237141208.1;start_range=.,1;transl_table=11 NZ_NPLZ01000029.1 RefSeq gene 675 1370 . - . ID=gene-CCO53_RS23445;Name=CCO53_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23445;old_locus_tag=CCO53_23400 NZ_NPLZ01000029.1 Protein Homology CDS 675 1370 . - 0 ID=cds-WP_094887853.1;Parent=gene-CCO53_RS23445;Dbxref=GenBank:WP_094887853.1;Name=WP_094887853.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026766.6;locus_tag=CCO53_RS23445;product=Imm26 family immunity protein;protein_id=WP_094887853.1;transl_table=11 NZ_NPLZ01000029.1 RefSeq gene 1393 2238 . - . ID=gene-CCO53_RS24215;Name=CCO53_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24215 NZ_NPLZ01000029.1 Protein Homology CDS 1393 2238 . - 0 ID=cds-WP_272897680.1;Parent=gene-CCO53_RS24215;Dbxref=GenBank:WP_272897680.1;Name=WP_272897680.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=CCO53_RS24215;product=RHS repeat-associated core domain-containing protein;protein_id=WP_272897680.1;transl_table=11 NZ_NPLZ01000029.1 RefSeq pseudogene 2271 2387 . - . ID=gene-CCO53_RS23455;Name=CCO53_RS23455;end_range=2387,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23455;partial=true;pseudo=true NZ_NPLZ01000029.1 Protein Homology CDS 2271 2387 . - 0 ID=cds-CCO53_RS23455;Parent=gene-CCO53_RS23455;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=CCO53_RS23455;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_NPLZ01000003.1 1 389752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000003.1 RefSeq region 1 389752 . + . ID=NZ_NPLZ01000003.1:1..389752;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000003.1 RefSeq gene 1 73 . + . ID=gene-CCO53_RS06270;Name=CCO53_RS06270;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS06270;old_locus_tag=CCO53_06260;partial=true;start_range=.,1 NZ_NPLZ01000003.1 cmsearch rRNA 1 73 . + . ID=rna-CCO53_RS06270;Parent=gene-CCO53_RS06270;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS06270;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPLZ01000003.1 cmsearch exon 1 73 . + . ID=exon-CCO53_RS06270-1;Parent=rna-CCO53_RS06270;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS06270;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPLZ01000003.1 RefSeq gene 270 385 . + . ID=gene-CCO53_RS06275;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO53_RS06275;old_locus_tag=CCO53_06265 NZ_NPLZ01000003.1 cmsearch rRNA 270 385 . + . ID=rna-CCO53_RS06275;Parent=gene-CCO53_RS06275;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS06275;product=5S ribosomal RNA NZ_NPLZ01000003.1 cmsearch exon 270 385 . + . ID=exon-CCO53_RS06275-1;Parent=rna-CCO53_RS06275;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS06275;product=5S ribosomal RNA NZ_NPLZ01000003.1 RefSeq gene 594 1049 . + . ID=gene-CCO53_RS06280;Name=CCO53_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06280;old_locus_tag=CCO53_06270 NZ_NPLZ01000003.1 Protein Homology CDS 594 1049 . + 0 ID=cds-WP_000985653.1;Parent=gene-CCO53_RS06280;Dbxref=GenBank:WP_000985653.1;Name=WP_000985653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=CCO53_RS06280;product=DUF4385 domain-containing protein;protein_id=WP_000985653.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 1153 2454 . + . ID=gene-CCO53_RS06285;Name=CCO53_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06285;old_locus_tag=CCO53_06275 NZ_NPLZ01000003.1 Protein Homology CDS 1153 2454 . + 0 ID=cds-WP_094887604.1;Parent=gene-CCO53_RS06285;Dbxref=GenBank:WP_094887604.1;Name=WP_094887604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=CCO53_RS06285;product=MFS transporter;protein_id=WP_094887604.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 2451 2774 . - . ID=gene-CCO53_RS06290;Name=CCO53_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06290;old_locus_tag=CCO53_06280 NZ_NPLZ01000003.1 Protein Homology CDS 2451 2774 . - 0 ID=cds-WP_023249612.1;Parent=gene-CCO53_RS06290;Dbxref=GenBank:WP_023249612.1;Name=WP_023249612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=CCO53_RS06290;product=YfiM family lipoprotein;protein_id=WP_023249612.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 2819 4174 . - . ID=gene-CCO53_RS06295;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=CCO53_RS06295;old_locus_tag=CCO53_06285 NZ_NPLZ01000003.1 Protein Homology CDS 2819 4174 . - 0 ID=cds-WP_000949286.1;Parent=gene-CCO53_RS06295;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=CCO53_RS06295;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 4289 6949 . - . ID=gene-CCO53_RS06300;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=CCO53_RS06300;old_locus_tag=CCO53_06290 NZ_NPLZ01000003.1 Protein Homology CDS 4289 6949 . - 0 ID=cds-WP_094887605.1;Parent=gene-CCO53_RS06300;Dbxref=GenBank:WP_094887605.1;Name=WP_094887605.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=CCO53_RS06300;product=protein lysine acetyltransferase;protein_id=WP_094887605.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 7003 7683 . - . ID=gene-CCO53_RS06305;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=CCO53_RS06305;old_locus_tag=CCO53_06295 NZ_NPLZ01000003.1 Protein Homology CDS 7003 7683 . - 0 ID=cds-WP_023202571.1;Parent=gene-CCO53_RS06305;Dbxref=GenBank:WP_023202571.1;Name=WP_023202571.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=CCO53_RS06305;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_023202571.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 7756 8175 . - . ID=gene-CCO53_RS06310;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=CCO53_RS06310;old_locus_tag=CCO53_06300 NZ_NPLZ01000003.1 Protein Homology CDS 7756 8175 . - 0 ID=cds-WP_001098732.1;Parent=gene-CCO53_RS06310;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=CCO53_RS06310;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 8379 9416 . + . ID=gene-CCO53_RS06320;Name=CCO53_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06320;old_locus_tag=CCO53_06310 NZ_NPLZ01000003.1 Protein Homology CDS 8379 9416 . + 0 ID=cds-WP_000997368.1;Parent=gene-CCO53_RS06320;Dbxref=GenBank:WP_000997368.1;Name=WP_000997368.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=CCO53_RS06320;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 9532 10221 . - . ID=gene-CCO53_RS06325;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=CCO53_RS06325;old_locus_tag=CCO53_06315 NZ_NPLZ01000003.1 Protein Homology CDS 9532 10221 . - 0 ID=cds-WP_000179978.1;Parent=gene-CCO53_RS06325;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=CCO53_RS06325;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 10540 10923 . + . ID=gene-CCO53_RS06330;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=CCO53_RS06330;old_locus_tag=CCO53_06320 NZ_NPLZ01000003.1 Protein Homology CDS 10540 10923 . + 0 ID=cds-WP_000627811.1;Parent=gene-CCO53_RS06330;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=CCO53_RS06330;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 10985 11572 . - . ID=gene-CCO53_RS06335;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=CCO53_RS06335;old_locus_tag=CCO53_06325 NZ_NPLZ01000003.1 Protein Homology CDS 10985 11572 . - 0 ID=cds-WP_000188415.1;Parent=gene-CCO53_RS06335;Dbxref=GenBank:WP_000188415.1;Name=WP_000188415.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=CCO53_RS06335;product=cysteine/O-acetylserine transporter;protein_id=WP_000188415.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 11675 12574 . + . ID=gene-CCO53_RS06340;Name=CCO53_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06340;old_locus_tag=CCO53_06330 NZ_NPLZ01000003.1 Protein Homology CDS 11675 12574 . + 0 ID=cds-WP_001535061.1;Parent=gene-CCO53_RS06340;Dbxref=GenBank:WP_001535061.1;Name=WP_001535061.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=CCO53_RS06340;product=LysR family transcriptional regulator;protein_id=WP_001535061.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 12592 13926 . - . ID=gene-CCO53_RS06345;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=CCO53_RS06345;old_locus_tag=CCO53_06335 NZ_NPLZ01000003.1 Protein Homology CDS 12592 13926 . - 0 ID=cds-WP_000219174.1;Parent=gene-CCO53_RS06345;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=CCO53_RS06345;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 14057 14794 . + . ID=gene-CCO53_RS06350;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=CCO53_RS06350;old_locus_tag=CCO53_06340 NZ_NPLZ01000003.1 Protein Homology CDS 14057 14794 . + 0 ID=cds-WP_000083345.1;Parent=gene-CCO53_RS06350;Dbxref=GenBank:WP_000083345.1;Name=WP_000083345.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=CCO53_RS06350;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_000083345.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 14779 16401 . - . ID=gene-CCO53_RS06355;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CCO53_RS06355;old_locus_tag=CCO53_06345 NZ_NPLZ01000003.1 Protein Homology CDS 14779 16401 . - 0 ID=cds-WP_001535060.1;Parent=gene-CCO53_RS06355;Dbxref=GenBank:WP_001535060.1;Name=WP_001535060.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=CCO53_RS06355;product=L-aspartate oxidase;protein_id=WP_001535060.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 16665 16829 . + . ID=gene-CCO53_RS23625;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=CCO53_RS23625 NZ_NPLZ01000003.1 Protein Homology CDS 16665 16829 . + 0 ID=cds-WP_014344135.1;Parent=gene-CCO53_RS23625;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=CCO53_RS23625;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 16826 17401 . + . ID=gene-CCO53_RS06365;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CCO53_RS06365;old_locus_tag=CCO53_06355 NZ_NPLZ01000003.1 Protein Homology CDS 16826 17401 . + 0 ID=cds-WP_000003307.1;Parent=gene-CCO53_RS06365;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=CCO53_RS06365;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 17433 18083 . + . ID=gene-CCO53_RS06370;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=CCO53_RS06370;old_locus_tag=CCO53_06360 NZ_NPLZ01000003.1 Protein Homology CDS 17433 18083 . + 0 ID=cds-WP_001168374.1;Parent=gene-CCO53_RS06370;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=CCO53_RS06370;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 18083 19039 . + . ID=gene-CCO53_RS06375;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=CCO53_RS06375;old_locus_tag=CCO53_06365 NZ_NPLZ01000003.1 Protein Homology CDS 18083 19039 . + 0 ID=cds-WP_000812017.1;Parent=gene-CCO53_RS06375;Dbxref=GenBank:WP_000812017.1;Name=WP_000812017.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=CCO53_RS06375;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812017.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 19036 19515 . + . ID=gene-CCO53_RS06380;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=CCO53_RS06380;old_locus_tag=CCO53_06370 NZ_NPLZ01000003.1 Protein Homology CDS 19036 19515 . + 0 ID=cds-WP_000589087.1;Parent=gene-CCO53_RS06380;Dbxref=GenBank:WP_000589087.1;Name=WP_000589087.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=CCO53_RS06380;product=SoxR-reducing system protein RseC;protein_id=WP_000589087.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 19766 21565 . + . ID=gene-CCO53_RS06385;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CCO53_RS06385;old_locus_tag=CCO53_06375 NZ_NPLZ01000003.1 Protein Homology CDS 19766 21565 . + 0 ID=cds-WP_000790154.1;Parent=gene-CCO53_RS06385;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=CCO53_RS06385;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 21582 22556 . + . ID=gene-CCO53_RS06390;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CCO53_RS06390;old_locus_tag=CCO53_06380 NZ_NPLZ01000003.1 Protein Homology CDS 21582 22556 . + 0 ID=cds-WP_000002559.1;Parent=gene-CCO53_RS06390;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=CCO53_RS06390;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 22830 23510 . + . ID=gene-CCO53_RS06400;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CCO53_RS06400;old_locus_tag=CCO53_06390 NZ_NPLZ01000003.1 Protein Homology CDS 22830 23510 . + 0 ID=cds-WP_001068341.1;Parent=gene-CCO53_RS06400;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=CCO53_RS06400;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 23507 24412 . + . ID=gene-CCO53_RS06405;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CCO53_RS06405;old_locus_tag=CCO53_06395 NZ_NPLZ01000003.1 Protein Homology CDS 23507 24412 . + 0 ID=cds-WP_000102230.1;Parent=gene-CCO53_RS06405;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=CCO53_RS06405;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 24424 25152 . + . ID=gene-CCO53_RS06410;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CCO53_RS06410;old_locus_tag=CCO53_06400 NZ_NPLZ01000003.1 Protein Homology CDS 24424 25152 . + 0 ID=cds-WP_000399380.1;Parent=gene-CCO53_RS06410;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=CCO53_RS06410;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 25164 25895 . + . ID=gene-CCO53_RS06415;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=CCO53_RS06415;old_locus_tag=CCO53_06405 NZ_NPLZ01000003.1 Protein Homology CDS 25164 25895 . + 0 ID=cds-WP_000818969.1;Parent=gene-CCO53_RS06415;Dbxref=GenBank:WP_000818969.1;Name=WP_000818969.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=CCO53_RS06415;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818969.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 25895 26275 . + . ID=gene-CCO53_RS06420;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CCO53_RS06420;old_locus_tag=CCO53_06410 NZ_NPLZ01000003.1 Protein Homology CDS 25895 26275 . + 0 ID=cds-WP_000986043.1;Parent=gene-CCO53_RS06420;Dbxref=GenBank:WP_000986043.1;Name=WP_000986043.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=CCO53_RS06420;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 26387 26647 . - . ID=gene-CCO53_RS06425;Name=CCO53_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06425;old_locus_tag=CCO53_06415 NZ_NPLZ01000003.1 Protein Homology CDS 26387 26647 . - 0 ID=cds-WP_001196291.1;Parent=gene-CCO53_RS06425;Dbxref=GenBank:WP_001196291.1;Name=WP_001196291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=CCO53_RS06425;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196291.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 26685 27611 . - . ID=gene-CCO53_RS06430;Name=CCO53_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06430;old_locus_tag=CCO53_06420 NZ_NPLZ01000003.1 Protein Homology CDS 26685 27611 . - 0 ID=cds-WP_001022463.1;Parent=gene-CCO53_RS06430;Dbxref=GenBank:WP_001022463.1;Name=WP_001022463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=CCO53_RS06430;product=LysR family transcriptional regulator;protein_id=WP_001022463.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 27727 28923 . + . ID=gene-CCO53_RS06435;Name=CCO53_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06435;old_locus_tag=CCO53_06425 NZ_NPLZ01000003.1 Protein Homology CDS 27727 28923 . + 0 ID=cds-WP_001276365.1;Parent=gene-CCO53_RS06435;Dbxref=GenBank:WP_001276365.1;Name=WP_001276365.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=CCO53_RS06435;product=L-lactate MFS transporter;protein_id=WP_001276365.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 28945 29862 . + . ID=gene-CCO53_RS06440;Name=CCO53_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06440;old_locus_tag=CCO53_06430 NZ_NPLZ01000003.1 Protein Homology CDS 28945 29862 . + 0 ID=cds-WP_058331988.1;Parent=gene-CCO53_RS06440;Dbxref=GenBank:WP_058331988.1;Name=WP_058331988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=CCO53_RS06440;product=oxidoreductase;protein_id=WP_058331988.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 29901 30749 . - . ID=gene-CCO53_RS06445;Name=CCO53_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06445;old_locus_tag=CCO53_06435 NZ_NPLZ01000003.1 Protein Homology CDS 29901 30749 . - 0 ID=cds-WP_000995694.1;Parent=gene-CCO53_RS06445;Dbxref=GenBank:WP_000995694.1;Name=WP_000995694.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=CCO53_RS06445;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995694.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 30865 31758 . + . ID=gene-CCO53_RS06450;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CCO53_RS06450;old_locus_tag=CCO53_06440 NZ_NPLZ01000003.1 Protein Homology CDS 30865 31758 . + 0 ID=cds-WP_001048531.1;Parent=gene-CCO53_RS06450;Dbxref=GenBank:WP_001048531.1;Name=WP_001048531.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=CCO53_RS06450;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001048531.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 31769 33130 . + . ID=gene-CCO53_RS06455;Name=CCO53_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06455;old_locus_tag=CCO53_06445 NZ_NPLZ01000003.1 Protein Homology CDS 31769 33130 . + 0 ID=cds-WP_058331987.1;Parent=gene-CCO53_RS06455;Dbxref=GenBank:WP_058331987.1;Name=WP_058331987.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=CCO53_RS06455;product=PTS transporter subunit EIIC;protein_id=WP_058331987.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 33134 33769 . + . ID=gene-CCO53_RS06460;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=CCO53_RS06460;old_locus_tag=CCO53_06450 NZ_NPLZ01000003.1 Protein Homology CDS 33134 33769 . + 0 ID=cds-WP_000253558.1;Parent=gene-CCO53_RS06460;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=CCO53_RS06460;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 33794 34345 . + . ID=gene-CCO53_RS06465;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CCO53_RS06465;old_locus_tag=CCO53_06455 NZ_NPLZ01000003.1 Protein Homology CDS 33794 34345 . + 0 ID=cds-WP_001134564.1;Parent=gene-CCO53_RS06465;Dbxref=GenBank:WP_001134564.1;Name=WP_001134564.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=CCO53_RS06465;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134564.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 34396 35940 . - . ID=gene-CCO53_RS06470;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=CCO53_RS06470;old_locus_tag=CCO53_06460 NZ_NPLZ01000003.1 Protein Homology CDS 34396 35940 . - 0 ID=cds-WP_000734241.1;Parent=gene-CCO53_RS06470;Dbxref=GenBank:WP_000734241.1;Name=WP_000734241.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=CCO53_RS06470;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734241.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 35941 36174 . - . ID=gene-CCO53_RS06475;Name=CCO53_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06475;old_locus_tag=CCO53_06465 NZ_NPLZ01000003.1 Protein Homology CDS 35941 36174 . - 0 ID=cds-WP_001747289.1;Parent=gene-CCO53_RS06475;Dbxref=GenBank:WP_001747289.1;Name=WP_001747289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=CCO53_RS06475;product=hypothetical protein;protein_id=WP_001747289.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 36196 40083 . + . ID=gene-CCO53_RS06480;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=CCO53_RS06480;old_locus_tag=CCO53_06470 NZ_NPLZ01000003.1 Protein Homology CDS 36196 40083 . + 0 ID=cds-WP_000970047.1;Parent=gene-CCO53_RS06480;Dbxref=GenBank:WP_000970047.1;Name=WP_000970047.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=CCO53_RS06480;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970047.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 40733 42163 . + . ID=gene-CCO53_RS06485;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=CCO53_RS06485;old_locus_tag=CCO53_06475 NZ_NPLZ01000003.1 Protein Homology CDS 40733 42163 . + 0 ID=cds-WP_125855796.1;Parent=gene-CCO53_RS06485;Dbxref=GenBank:WP_125855796.1;Name=WP_125855796.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=CCO53_RS06485;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_125855796.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 42165 42929 . + . ID=gene-CCO53_RS06490;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=CCO53_RS06490;old_locus_tag=CCO53_06480 NZ_NPLZ01000003.1 Protein Homology CDS 42165 42929 . + 0 ID=cds-WP_001054241.1;Parent=gene-CCO53_RS06490;Dbxref=GenBank:WP_001054241.1;Name=WP_001054241.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=CCO53_RS06490;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001054241.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 42929 44263 . + . ID=gene-CCO53_RS06495;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=CCO53_RS06495;old_locus_tag=CCO53_06485 NZ_NPLZ01000003.1 Protein Homology CDS 42929 44263 . + 0 ID=cds-WP_024131115.1;Parent=gene-CCO53_RS06495;Dbxref=GenBank:WP_024131115.1;Name=WP_024131115.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=CCO53_RS06495;product=two-component system response regulator GlrR;protein_id=WP_024131115.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 44340 44678 . + . ID=gene-CCO53_RS06500;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=CCO53_RS06500;old_locus_tag=CCO53_06490 NZ_NPLZ01000003.1 Protein Homology CDS 44340 44678 . + 0 ID=cds-WP_000717694.1;Parent=gene-CCO53_RS06500;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=CCO53_RS06500;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 44727 46187 . - . ID=gene-CCO53_RS06505;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=CCO53_RS06505;old_locus_tag=CCO53_06495 NZ_NPLZ01000003.1 Protein Homology CDS 44727 46187 . - 0 ID=cds-WP_000856793.1;Parent=gene-CCO53_RS06505;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=CCO53_RS06505;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 46243 48387 . - . ID=gene-CCO53_RS06510;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=CCO53_RS06510;old_locus_tag=CCO53_06500 NZ_NPLZ01000003.1 Protein Homology CDS 46243 48387 . - 0 ID=cds-WP_001100652.1;Parent=gene-CCO53_RS06510;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=CCO53_RS06510;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 48470 49801 . - . ID=gene-CCO53_RS06515;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=CCO53_RS06515;old_locus_tag=CCO53_06505 NZ_NPLZ01000003.1 Protein Homology CDS 48470 49801 . - 0 ID=cds-WP_000100008.1;Parent=gene-CCO53_RS06515;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=CCO53_RS06515;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 50162 51706 . - . ID=gene-CCO53_RS06520;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=CCO53_RS06520;old_locus_tag=CCO53_06510 NZ_NPLZ01000003.1 Protein Homology CDS 50162 51706 . - 0 ID=cds-WP_001187144.1;Parent=gene-CCO53_RS06520;Dbxref=GenBank:WP_001187144.1;Name=WP_001187144.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=CCO53_RS06520;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187144.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 51888 53078 . - . ID=gene-CCO53_RS06525;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=CCO53_RS06525;old_locus_tag=CCO53_06515 NZ_NPLZ01000003.1 Protein Homology CDS 51888 53078 . - 0 ID=cds-WP_000883147.1;Parent=gene-CCO53_RS06525;Dbxref=GenBank:WP_000883147.1;Name=WP_000883147.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=CCO53_RS06525;product=NO-inducible flavohemoprotein;protein_id=WP_000883147.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 53403 54656 . + . ID=gene-CCO53_RS06530;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CCO53_RS06530;old_locus_tag=CCO53_06520 NZ_NPLZ01000003.1 Protein Homology CDS 53403 54656 . + 0 ID=cds-WP_000919178.1;Parent=gene-CCO53_RS06530;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=CCO53_RS06530;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 54852 55991 . + . ID=gene-CCO53_RS06535;Name=CCO53_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06535;old_locus_tag=CCO53_06525 NZ_NPLZ01000003.1 Protein Homology CDS 54852 55991 . + 0 ID=cds-WP_001173729.1;Parent=gene-CCO53_RS06535;Dbxref=GenBank:WP_001173729.1;Name=WP_001173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=CCO53_RS06535;product=3-phenylpropionate MFS transporter;protein_id=WP_001173729.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 55986 57263 . - . ID=gene-CCO53_RS06540;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=CCO53_RS06540;old_locus_tag=CCO53_06530 NZ_NPLZ01000003.1 Protein Homology CDS 55986 57263 . - 0 ID=cds-WP_000982962.1;Parent=gene-CCO53_RS06540;Dbxref=GenBank:WP_000982962.1;Name=WP_000982962.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=CCO53_RS06540;product=stationary phase inducible protein CsiE;protein_id=WP_000982962.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 57389 58027 . + . ID=gene-CCO53_RS06545;Name=CCO53_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06545;old_locus_tag=CCO53_06535 NZ_NPLZ01000003.1 Protein Homology CDS 57389 58027 . + 0 ID=cds-WP_001653455.1;Parent=gene-CCO53_RS06545;Dbxref=GenBank:WP_001653455.1;Name=WP_001653455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=CCO53_RS06545;product=DUF1007 family protein;protein_id=WP_001653455.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 58018 59004 . + . ID=gene-CCO53_RS06550;Name=CCO53_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06550;old_locus_tag=CCO53_06540 NZ_NPLZ01000003.1 Protein Homology CDS 58018 59004 . + 0 ID=cds-WP_058331827.1;Parent=gene-CCO53_RS06550;Dbxref=GenBank:WP_058331827.1;Name=WP_058331827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=CCO53_RS06550;product=nickel/cobalt transporter;protein_id=WP_058331827.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 59005 60018 . - . ID=gene-CCO53_RS06555;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=CCO53_RS06555;old_locus_tag=CCO53_06545 NZ_NPLZ01000003.1 Protein Homology CDS 59005 60018 . - 0 ID=cds-WP_000020685.1;Parent=gene-CCO53_RS06555;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=CCO53_RS06555;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 60029 60847 . - . ID=gene-CCO53_RS06560;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=CCO53_RS06560;old_locus_tag=CCO53_06550 NZ_NPLZ01000003.1 Protein Homology CDS 60029 60847 . - 0 ID=cds-WP_000017587.1;Parent=gene-CCO53_RS06560;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=CCO53_RS06560;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 60851 61894 . - . ID=gene-CCO53_RS06565;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=CCO53_RS06565;old_locus_tag=CCO53_06555 NZ_NPLZ01000003.1 Protein Homology CDS 60851 61894 . - 0 ID=cds-WP_000985209.1;Parent=gene-CCO53_RS06565;Dbxref=GenBank:WP_000985209.1;Name=WP_000985209.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=CCO53_RS06565;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985209.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 62076 62954 . - . ID=gene-CCO53_RS06570;Name=CCO53_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06570;old_locus_tag=CCO53_06560 NZ_NPLZ01000003.1 Protein Homology CDS 62076 62954 . - 0 ID=cds-WP_058331828.1;Parent=gene-CCO53_RS06570;Dbxref=GenBank:WP_058331828.1;Name=WP_058331828.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=CCO53_RS06570;product=alpha/beta hydrolase;protein_id=WP_058331828.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 63099 63902 . - . ID=gene-CCO53_RS06575;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=CCO53_RS06575;old_locus_tag=CCO53_06565 NZ_NPLZ01000003.1 Protein Homology CDS 63099 63902 . - 0 ID=cds-WP_000553473.1;Parent=gene-CCO53_RS06575;Dbxref=GenBank:WP_000553473.1;Name=WP_000553473.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=CCO53_RS06575;product=inositol-1-monophosphatase;protein_id=WP_000553473.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 64021 64752 . + . ID=gene-CCO53_RS06580;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=CCO53_RS06580;old_locus_tag=CCO53_06570 NZ_NPLZ01000003.1 Protein Homology CDS 64021 64752 . + 0 ID=cds-WP_000940032.1;Parent=gene-CCO53_RS06580;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=CCO53_RS06580;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 64912 65406 . + . ID=gene-CCO53_RS06585;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=CCO53_RS06585;old_locus_tag=CCO53_06575 NZ_NPLZ01000003.1 Protein Homology CDS 64912 65406 . + 0 ID=cds-WP_001241346.1;Parent=gene-CCO53_RS06585;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=CCO53_RS06585;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 65587 66801 . + . ID=gene-CCO53_RS06590;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=CCO53_RS06590;old_locus_tag=CCO53_06580 NZ_NPLZ01000003.1 Protein Homology CDS 65587 66801 . + 0 ID=cds-WP_000775263.1;Parent=gene-CCO53_RS06590;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=CCO53_RS06590;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 66829 67215 . + . ID=gene-CCO53_RS06595;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=CCO53_RS06595;old_locus_tag=CCO53_06585 NZ_NPLZ01000003.1 Protein Homology CDS 66829 67215 . + 0 ID=cds-WP_000331704.1;Parent=gene-CCO53_RS06595;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=CCO53_RS06595;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 67244 67567 . + . ID=gene-CCO53_RS06600;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=CCO53_RS06600;old_locus_tag=CCO53_06590 NZ_NPLZ01000003.1 Protein Homology CDS 67244 67567 . + 0 ID=cds-WP_000028952.1;Parent=gene-CCO53_RS06600;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=CCO53_RS06600;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 67763 68278 . + . ID=gene-CCO53_RS06605;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=CCO53_RS06605;old_locus_tag=CCO53_06595 NZ_NPLZ01000003.1 Protein Homology CDS 67763 68278 . + 0 ID=cds-WP_000384398.1;Parent=gene-CCO53_RS06605;Dbxref=GenBank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=CCO53_RS06605;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 68291 70141 . + . ID=gene-CCO53_RS06610;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=CCO53_RS06610;old_locus_tag=CCO53_06600 NZ_NPLZ01000003.1 Protein Homology CDS 68291 70141 . + 0 ID=cds-WP_001196654.1;Parent=gene-CCO53_RS06610;Dbxref=GenBank:WP_001196654.1;Name=WP_001196654.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=CCO53_RS06610;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196654.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 70143 70478 . + . ID=gene-CCO53_RS06615;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=CCO53_RS06615;old_locus_tag=CCO53_06605 NZ_NPLZ01000003.1 Protein Homology CDS 70143 70478 . + 0 ID=cds-WP_001124466.1;Parent=gene-CCO53_RS06615;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=CCO53_RS06615;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 70490 70690 . + . ID=gene-CCO53_RS06620;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=CCO53_RS06620;old_locus_tag=CCO53_06610 NZ_NPLZ01000003.1 Protein Homology CDS 70490 70690 . + 0 ID=cds-WP_000523621.1;Parent=gene-CCO53_RS06620;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=CCO53_RS06620;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 70744 72027 . + . ID=gene-CCO53_RS06625;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=CCO53_RS06625;old_locus_tag=CCO53_06615 NZ_NPLZ01000003.1 Protein Homology CDS 70744 72027 . + 0 ID=cds-WP_094887606.1;Parent=gene-CCO53_RS06625;Dbxref=GenBank:WP_094887606.1;Name=WP_094887606.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=CCO53_RS06625;product=aminopeptidase PepB;protein_id=WP_094887606.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 72137 72913 . + . ID=gene-CCO53_RS06630;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO53_RS06630;old_locus_tag=CCO53_06620 NZ_NPLZ01000003.1 Protein Homology CDS 72137 72913 . + 0 ID=cds-WP_001533245.1;Parent=gene-CCO53_RS06630;Dbxref=GenBank:WP_001533245.1;Name=WP_001533245.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=CCO53_RS06630;product=enhanced serine sensitivity protein SseB;protein_id=WP_001533245.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 72950 73066 . - . ID=gene-CCO53_RS24335;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=CCO53_RS24335 NZ_NPLZ01000003.1 Protein Homology CDS 72950 73066 . - 0 ID=cds-WP_350406992.1;Parent=gene-CCO53_RS24335;Dbxref=GenBank:WP_350406992.1;Name=WP_350406992.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=CCO53_RS24335;product=small toxic inner membrane protein TimP;protein_id=WP_350406992.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 73482 74150 . - . ID=gene-CCO53_RS06640;Name=CCO53_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06640;old_locus_tag=CCO53_06630 NZ_NPLZ01000003.1 Protein Homology CDS 73482 74150 . - 0 ID=cds-WP_000355295.1;Parent=gene-CCO53_RS06640;Dbxref=GenBank:WP_000355295.1;Name=WP_000355295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=CCO53_RS06640;product=DUF5066 family protein;protein_id=WP_000355295.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 74397 75239 . - . ID=gene-CCO53_RS06645;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO53_RS06645;old_locus_tag=CCO53_06635 NZ_NPLZ01000003.1 Protein Homology CDS 74397 75239 . - 0 ID=cds-WP_080183166.1;Parent=gene-CCO53_RS06645;Dbxref=GenBank:WP_080183166.1;Name=WP_080183166.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=CCO53_RS06645;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_080183166.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 75448 80382 . + . ID=gene-CCO53_RS06650;Name=CCO53_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06650;old_locus_tag=CCO53_06640 NZ_NPLZ01000003.1 Protein Homology CDS 75448 80382 . + 0 ID=cds-WP_094887607.1;Parent=gene-CCO53_RS06650;Dbxref=GenBank:WP_094887607.1;Name=WP_094887607.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=CCO53_RS06650;product=alpha-2-macroglobulin family protein;protein_id=WP_094887607.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 80383 82698 . + . ID=gene-CCO53_RS06655;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=CCO53_RS06655;old_locus_tag=CCO53_06645 NZ_NPLZ01000003.1 Protein Homology CDS 80383 82698 . + 0 ID=cds-WP_094887608.1;Parent=gene-CCO53_RS06655;Dbxref=GenBank:WP_094887608.1;Name=WP_094887608.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=CCO53_RS06655;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_094887608.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 82849 85227 . + . ID=gene-CCO53_RS06660;Name=CCO53_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06660;old_locus_tag=CCO53_06650 NZ_NPLZ01000003.1 Protein Homology CDS 82849 85227 . + 0 ID=cds-WP_058331760.1;Parent=gene-CCO53_RS06660;Dbxref=GenBank:WP_058331760.1;Name=WP_058331760.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=CCO53_RS06660;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_058331760.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 85224 85853 . + . ID=gene-CCO53_RS06665;Name=CCO53_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06665;old_locus_tag=CCO53_06655 NZ_NPLZ01000003.1 Protein Homology CDS 85224 85853 . + 0 ID=cds-WP_000077436.1;Parent=gene-CCO53_RS06665;Dbxref=GenBank:WP_000077436.1;Name=WP_000077436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=CCO53_RS06665;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000077436.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 85846 86655 . + . ID=gene-CCO53_RS06670;Name=CCO53_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06670;old_locus_tag=CCO53_06660 NZ_NPLZ01000003.1 Protein Homology CDS 85846 86655 . + 0 ID=cds-WP_000544885.1;Parent=gene-CCO53_RS06670;Dbxref=GenBank:WP_000544885.1;Name=WP_000544885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=CCO53_RS06670;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544885.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 86655 87518 . + . ID=gene-CCO53_RS06675;Name=CCO53_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06675;old_locus_tag=CCO53_06665 NZ_NPLZ01000003.1 Protein Homology CDS 86655 87518 . + 0 ID=cds-WP_094887609.1;Parent=gene-CCO53_RS06675;Dbxref=GenBank:WP_094887609.1;Name=WP_094887609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=CCO53_RS06675;product=4Fe-4S binding protein;protein_id=WP_094887609.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 87639 88070 . + . ID=gene-CCO53_RS06680;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CCO53_RS06680;old_locus_tag=CCO53_06670 NZ_NPLZ01000003.1 Protein Homology CDS 87639 88070 . + 0 ID=cds-WP_000963846.1;Parent=gene-CCO53_RS06680;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=CCO53_RS06680;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 88277 89443 . + . ID=gene-CCO53_RS06685;Name=CCO53_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06685;old_locus_tag=CCO53_06675 NZ_NPLZ01000003.1 Protein Homology CDS 88277 89443 . + 0 ID=cds-WP_000003206.1;Parent=gene-CCO53_RS06685;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=CCO53_RS06685;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 89735 90745 . + . ID=gene-CCO53_RS06695;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=CCO53_RS06695;old_locus_tag=CCO53_06685 NZ_NPLZ01000003.1 Protein Homology CDS 89735 90745 . + 0 ID=cds-WP_094887610.1;Parent=gene-CCO53_RS06695;Dbxref=GenBank:WP_094887610.1;Name=WP_094887610.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=CCO53_RS06695;product=cytoskeleton protein RodZ;protein_id=WP_094887610.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 90772 91890 . + . ID=gene-CCO53_RS06700;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CCO53_RS06700;old_locus_tag=CCO53_06690 NZ_NPLZ01000003.1 Protein Homology CDS 90772 91890 . + 0 ID=cds-WP_000551804.1;Parent=gene-CCO53_RS06700;Dbxref=GenBank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=CCO53_RS06700;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 92001 93275 . + . ID=gene-CCO53_RS06705;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CCO53_RS06705;old_locus_tag=CCO53_06695 NZ_NPLZ01000003.1 Protein Homology CDS 92001 93275 . + 0 ID=cds-WP_001107141.1;Parent=gene-CCO53_RS06705;Dbxref=GenBank:WP_001107141.1;Name=WP_001107141.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=CCO53_RS06705;product=histidine--tRNA ligase;protein_id=WP_001107141.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 93289 93909 . + . ID=gene-CCO53_RS06710;Name=CCO53_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06710;old_locus_tag=CCO53_06700 NZ_NPLZ01000003.1 Protein Homology CDS 93289 93909 . + 0 ID=cds-WP_000409190.1;Parent=gene-CCO53_RS06710;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=CCO53_RS06710;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 93920 95098 . + . ID=gene-CCO53_RS06715;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=CCO53_RS06715;old_locus_tag=CCO53_06705 NZ_NPLZ01000003.1 Protein Homology CDS 93920 95098 . + 0 ID=cds-WP_001177072.1;Parent=gene-CCO53_RS06715;Dbxref=GenBank:WP_001177072.1;Name=WP_001177072.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=CCO53_RS06715;product=outer membrane protein assembly factor BamB;protein_id=WP_001177072.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 95215 96687 . + . ID=gene-CCO53_RS06720;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CCO53_RS06720;old_locus_tag=CCO53_06710 NZ_NPLZ01000003.1 Protein Homology CDS 95215 96687 . + 0 ID=cds-WP_023196046.1;Parent=gene-CCO53_RS06720;Dbxref=GenBank:WP_023196046.1;Name=WP_023196046.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=CCO53_RS06720;product=ribosome biogenesis GTPase Der;protein_id=WP_023196046.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 96776 96997 . + . ID=gene-CCO53_RS06725;Name=CCO53_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06725;old_locus_tag=CCO53_06715 NZ_NPLZ01000003.1 Protein Homology CDS 96776 96997 . + 0 ID=cds-WP_000406469.1;Parent=gene-CCO53_RS06725;Dbxref=GenBank:WP_000406469.1;Name=WP_000406469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=CCO53_RS06725;product=zinc ribbon domain-containing protein;protein_id=WP_000406469.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 97343 99535 . + . ID=gene-CCO53_RS06730;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=CCO53_RS06730;old_locus_tag=CCO53_06720 NZ_NPLZ01000003.1 Protein Homology CDS 97343 99535 . + 0 ID=cds-WP_080160128.1;Parent=gene-CCO53_RS06730;Dbxref=GenBank:WP_080160128.1;Name=WP_080160128.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=CCO53_RS06730;product=intimin-like inverse autotransporter SinH;protein_id=WP_080160128.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 99593 100564 . + . ID=gene-CCO53_RS06735;Name=CCO53_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06735;old_locus_tag=CCO53_06725 NZ_NPLZ01000003.1 Protein Homology CDS 99593 100564 . + 0 ID=cds-WP_080160127.1;Parent=gene-CCO53_RS06735;Dbxref=GenBank:WP_080160127.1;Name=WP_080160127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=CCO53_RS06735;product=SinI family autotransporter-associated protein;protein_id=WP_080160127.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 100684 106281 . + . ID=gene-CCO53_RS06740;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=CCO53_RS06740;old_locus_tag=CCO53_06730 NZ_NPLZ01000003.1 Protein Homology CDS 100684 106281 . + 0 ID=cds-WP_080160126.1;Parent=gene-CCO53_RS06740;Dbxref=GenBank:WP_080160126.1;Name=WP_080160126.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=CCO53_RS06740;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_080160126.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 106447 113757 . + . ID=gene-CCO53_RS06745;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=CCO53_RS06745;old_locus_tag=CCO53_06735 NZ_NPLZ01000003.1 Protein Homology CDS 106447 113757 . + 0 ID=cds-WP_058331753.1;Parent=gene-CCO53_RS06745;Dbxref=GenBank:WP_058331753.1;Name=WP_058331753.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=CCO53_RS06745;product=DUF823/DUF824 repeat adhesin RatB;protein_id=WP_058331753.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq pseudogene 113758 113858 . + . ID=gene-CCO53_RS24340;Name=CCO53_RS24340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24340;partial=true;pseudo=true;start_range=.,113758 NZ_NPLZ01000003.1 Protein Homology CDS 113758 113858 . + 0 ID=cds-CCO53_RS24340;Parent=gene-CCO53_RS24340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_309258417.1;locus_tag=CCO53_RS24340;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,113758;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 114416 120406 . + . ID=gene-CCO53_RS06750;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=CCO53_RS06750;old_locus_tag=CCO53_06740 NZ_NPLZ01000003.1 Protein Homology CDS 114416 120406 . + 0 ID=cds-WP_094887611.1;Parent=gene-CCO53_RS06750;Dbxref=GenBank:WP_094887611.1;Name=WP_094887611.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=CCO53_RS06750;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_094887611.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 120568 121917 . - . ID=gene-CCO53_RS06755;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CCO53_RS06755;old_locus_tag=CCO53_06745 NZ_NPLZ01000003.1 Protein Homology CDS 120568 121917 . - 0 ID=cds-WP_000953168.1;Parent=gene-CCO53_RS06755;Dbxref=GenBank:WP_000953168.1;Name=WP_000953168.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=CCO53_RS06755;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000953168.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 122078 123544 . + . ID=gene-CCO53_RS06760;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CCO53_RS06760;old_locus_tag=CCO53_06750 NZ_NPLZ01000003.1 Protein Homology CDS 122078 123544 . + 0 ID=cds-WP_000944174.1;Parent=gene-CCO53_RS06760;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=CCO53_RS06760;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 123614 125191 . + . ID=gene-CCO53_RS06765;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CCO53_RS06765;old_locus_tag=CCO53_06755 NZ_NPLZ01000003.1 Protein Homology CDS 123614 125191 . + 0 ID=cds-WP_000138293.1;Parent=gene-CCO53_RS06765;Dbxref=GenBank:WP_000138293.1;Name=WP_000138293.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=CCO53_RS06765;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq pseudogene 125327 125646 . + . ID=gene-CCO53_RS06770;Name=CCO53_RS06770;end_range=125646,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS06770;old_locus_tag=CCO53_06760;partial=true;pseudo=true;start_range=.,125327 NZ_NPLZ01000003.1 Protein Homology CDS 125327 125646 . + 0 ID=cds-CCO53_RS06770;Parent=gene-CCO53_RS06770;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=125646,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611342.1;locus_tag=CCO53_RS06770;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,125327;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 125723 126052 . - . ID=gene-CCO53_RS06775;Name=CCO53_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06775;old_locus_tag=CCO53_06765 NZ_NPLZ01000003.1 Protein Homology CDS 125723 126052 . - 0 ID=cds-WP_023994424.1;Parent=gene-CCO53_RS06775;Dbxref=GenBank:WP_023994424.1;Name=WP_023994424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=CCO53_RS06775;product=DUF1493 family protein;protein_id=WP_023994424.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 126037 126498 . - . ID=gene-CCO53_RS24345;Name=CCO53_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24345 NZ_NPLZ01000003.1 Protein Homology CDS 126037 126498 . - 0 ID=cds-WP_000381628.1;Parent=gene-CCO53_RS24345;Dbxref=GenBank:WP_000381628.1;Name=WP_000381628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154057295.1;locus_tag=CCO53_RS24345;product=STM2901 family protein;protein_id=WP_000381628.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq pseudogene 126638 126757 . + . ID=gene-CCO53_RS23975;Name=CCO53_RS23975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23975;old_locus_tag=CCO53_06780;partial=true;pseudo=true;start_range=.,126638 NZ_NPLZ01000003.1 Protein Homology CDS 126638 126757 . + 0 ID=cds-CCO53_RS23975;Parent=gene-CCO53_RS23975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=CCO53_RS23975;partial=true;product=hypothetical protein;pseudo=true;start_range=.,126638;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 126835 127026 . - . ID=gene-CCO53_RS06795;Name=CCO53_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06795;old_locus_tag=CCO53_06785 NZ_NPLZ01000003.1 Protein Homology CDS 126835 127026 . - 0 ID=cds-WP_000075924.1;Parent=gene-CCO53_RS06795;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=CCO53_RS06795;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 127205 127339 . + . ID=gene-CCO53_RS06800;Name=CCO53_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06800;old_locus_tag=CCO53_06790 NZ_NPLZ01000003.1 Protein Homology CDS 127205 127339 . + 0 ID=cds-WP_094887612.1;Parent=gene-CCO53_RS06800;Dbxref=GenBank:WP_094887612.1;Name=WP_094887612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=CCO53_RS06800;product=hypothetical protein;protein_id=WP_094887612.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 127439 129652 . + . ID=gene-CCO53_RS06805;Name=CCO53_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06805;old_locus_tag=CCO53_06795 NZ_NPLZ01000003.1 Protein Homology CDS 127439 129652 . + 0 ID=cds-WP_000773643.1;Parent=gene-CCO53_RS06805;Dbxref=GenBank:WP_000773643.1;Name=WP_000773643.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=CCO53_RS06805;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773643.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 129688 131229 . - . ID=gene-CCO53_RS06810;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CCO53_RS06810;old_locus_tag=CCO53_06800 NZ_NPLZ01000003.1 Protein Homology CDS 129688 131229 . - 0 ID=cds-WP_001123330.1;Parent=gene-CCO53_RS06810;Dbxref=GenBank:WP_001123330.1;Name=WP_001123330.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=CCO53_RS06810;product=exopolyphosphatase;protein_id=WP_001123330.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 131234 133300 . - . ID=gene-CCO53_RS06815;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=CCO53_RS06815;old_locus_tag=CCO53_06805 NZ_NPLZ01000003.1 Protein Homology CDS 131234 133300 . - 0 ID=cds-WP_094887613.1;Parent=gene-CCO53_RS06815;Dbxref=GenBank:WP_094887613.1;Name=WP_094887613.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=CCO53_RS06815;product=polyphosphate kinase 1;protein_id=WP_094887613.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 133489 134127 . - . ID=gene-CCO53_RS06820;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CCO53_RS06820;old_locus_tag=CCO53_06810 NZ_NPLZ01000003.1 Protein Homology CDS 133489 134127 . - 0 ID=cds-WP_058331752.1;Parent=gene-CCO53_RS06820;Dbxref=GenBank:WP_058331752.1;Name=WP_058331752.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=CCO53_RS06820;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_058331752.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 134127 135164 . - . ID=gene-CCO53_RS06825;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CCO53_RS06825;old_locus_tag=CCO53_06815 NZ_NPLZ01000003.1 Protein Homology CDS 134127 135164 . - 0 ID=cds-WP_000130477.1;Parent=gene-CCO53_RS06825;Dbxref=GenBank:WP_000130477.1;Name=WP_000130477.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=CCO53_RS06825;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130477.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 135578 136204 . + . ID=gene-CCO53_RS06835;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CCO53_RS06835;old_locus_tag=CCO53_06825 NZ_NPLZ01000003.1 Protein Homology CDS 135578 136204 . + 0 ID=cds-WP_000706208.1;Parent=gene-CCO53_RS06835;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=CCO53_RS06835;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 136292 137581 . + . ID=gene-CCO53_RS06840;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=CCO53_RS06840;old_locus_tag=CCO53_06830 NZ_NPLZ01000003.1 Protein Homology CDS 136292 137581 . + 0 ID=cds-WP_000198343.1;Parent=gene-CCO53_RS06840;Dbxref=GenBank:WP_000198343.1;Name=WP_000198343.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=CCO53_RS06840;product=uracil permease;protein_id=WP_000198343.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 137676 138377 . + . ID=gene-CCO53_RS06845;Name=CCO53_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06845;old_locus_tag=CCO53_06835 NZ_NPLZ01000003.1 Protein Homology CDS 137676 138377 . + 0 ID=cds-WP_061835882.1;Parent=gene-CCO53_RS06845;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=CCO53_RS06845;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 138404 138763 . - . ID=gene-CCO53_RS06850;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CCO53_RS06850;old_locus_tag=CCO53_06840 NZ_NPLZ01000003.1 Protein Homology CDS 138404 138763 . - 0 ID=cds-WP_000132650.1;Parent=gene-CCO53_RS06850;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=CCO53_RS06850;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 138803 140266 . - . ID=gene-CCO53_RS06855;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=CCO53_RS06855;old_locus_tag=CCO53_06845 NZ_NPLZ01000003.1 Protein Homology CDS 138803 140266 . - 0 ID=cds-WP_094887615.1;Parent=gene-CCO53_RS06855;Dbxref=GenBank:WP_094887615.1;Name=WP_094887615.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=CCO53_RS06855;product=beta-barrel assembly-enhancing protease;protein_id=WP_094887615.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 140474 141541 . + . ID=gene-CCO53_RS06860;Name=CCO53_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06860;old_locus_tag=CCO53_06850 NZ_NPLZ01000003.1 Protein Homology CDS 140474 141541 . + 0 ID=cds-WP_000892056.1;Parent=gene-CCO53_RS06860;Dbxref=GenBank:WP_000892056.1;Name=WP_000892056.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=CCO53_RS06860;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 141817 143004 . + . ID=gene-CCO53_RS06865;Name=CCO53_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06865;old_locus_tag=CCO53_06855 NZ_NPLZ01000003.1 Protein Homology CDS 141817 143004 . + 0 ID=cds-WP_001533732.1;Parent=gene-CCO53_RS06865;Dbxref=GenBank:WP_001533732.1;Name=WP_001533732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=CCO53_RS06865;product=sugar diacid recognition domain-containing protein;protein_id=WP_001533732.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 143072 144340 . + . ID=gene-CCO53_RS06870;Name=CCO53_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06870;old_locus_tag=CCO53_06860 NZ_NPLZ01000003.1 Protein Homology CDS 143072 144340 . + 0 ID=cds-WP_000200859.1;Parent=gene-CCO53_RS06870;Dbxref=GenBank:WP_000200859.1;Name=WP_000200859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=CCO53_RS06870;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 144346 145485 . + . ID=gene-CCO53_RS06875;Name=CCO53_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06875;old_locus_tag=CCO53_06865 NZ_NPLZ01000003.1 Protein Homology CDS 144346 145485 . + 0 ID=cds-WP_023202076.1;Parent=gene-CCO53_RS06875;Dbxref=GenBank:WP_023202076.1;Name=WP_023202076.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=CCO53_RS06875;product=glycerate kinase;protein_id=WP_023202076.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 145532 146002 . - . ID=gene-CCO53_RS06880;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CCO53_RS06880;old_locus_tag=CCO53_06870 NZ_NPLZ01000003.1 Protein Homology CDS 145532 146002 . - 0 ID=cds-WP_001068686.1;Parent=gene-CCO53_RS06880;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=CCO53_RS06880;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 146002 146574 . - . ID=gene-CCO53_RS06885;Name=CCO53_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06885;old_locus_tag=CCO53_06875 NZ_NPLZ01000003.1 Protein Homology CDS 146002 146574 . - 0 ID=cds-WP_000189061.1;Parent=gene-CCO53_RS06885;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=CCO53_RS06885;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 146720 147598 . + . ID=gene-CCO53_RS06890;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CCO53_RS06890;old_locus_tag=CCO53_06880 NZ_NPLZ01000003.1 Protein Homology CDS 146720 147598 . + 0 ID=cds-WP_000494020.1;Parent=gene-CCO53_RS06890;Dbxref=GenBank:WP_000494020.1;Name=WP_000494020.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=CCO53_RS06890;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494020.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 147615 148649 . + . ID=gene-CCO53_RS06895;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=CCO53_RS06895;old_locus_tag=CCO53_06885 NZ_NPLZ01000003.1 Protein Homology CDS 147615 148649 . + 0 ID=cds-WP_000331880.1;Parent=gene-CCO53_RS06895;Dbxref=GenBank:WP_000331880.1;Name=WP_000331880.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=CCO53_RS06895;product=outer membrane protein assembly factor BamC;protein_id=WP_000331880.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 148824 149537 . + . ID=gene-CCO53_RS06900;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CCO53_RS06900;old_locus_tag=CCO53_06890 NZ_NPLZ01000003.1 Protein Homology CDS 148824 149537 . + 0 ID=cds-WP_001171630.1;Parent=gene-CCO53_RS06900;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=CCO53_RS06900;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 149668 150531 . + . ID=gene-CCO53_RS06905;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=CCO53_RS06905;old_locus_tag=CCO53_06895 NZ_NPLZ01000003.1 Protein Homology CDS 149668 150531 . + 0 ID=cds-WP_001267523.1;Parent=gene-CCO53_RS06905;Dbxref=GenBank:WP_001267523.1;Name=WP_001267523.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=CCO53_RS06905;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267523.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 150547 152565 . + . ID=gene-CCO53_RS06910;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=CCO53_RS06910;old_locus_tag=CCO53_06900 NZ_NPLZ01000003.1 Protein Homology CDS 150547 152565 . + 0 ID=cds-WP_094887616.1;Parent=gene-CCO53_RS06910;Dbxref=GenBank:WP_094887616.1;Name=WP_094887616.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=CCO53_RS06910;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_094887616.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 152592 152792 . - . ID=gene-CCO53_RS06915;Name=CCO53_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06915;old_locus_tag=CCO53_06905 NZ_NPLZ01000003.1 Protein Homology CDS 152592 152792 . - 0 ID=cds-WP_000383839.1;Parent=gene-CCO53_RS06915;Dbxref=GenBank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=CCO53_RS06915;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 152820 153947 . - . ID=gene-CCO53_RS06920;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=CCO53_RS06920;old_locus_tag=CCO53_06910 NZ_NPLZ01000003.1 Protein Homology CDS 152820 153947 . - 0 ID=cds-WP_001277825.1;Parent=gene-CCO53_RS06920;Dbxref=GenBank:WP_001277825.1;Name=WP_001277825.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=CCO53_RS06920;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277825.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 153951 154307 . - . ID=gene-CCO53_RS06925;Name=CCO53_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06925;old_locus_tag=CCO53_06915 NZ_NPLZ01000003.1 Protein Homology CDS 153951 154307 . - 0 ID=cds-WP_000631923.1;Parent=gene-CCO53_RS06925;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=CCO53_RS06925;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 154720 154779 . + . ID=gene-CCO53_RS23635;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=CCO53_RS23635 NZ_NPLZ01000003.1 Protein Homology CDS 154720 154779 . + 0 ID=cds-WP_001386977.1;Parent=gene-CCO53_RS23635;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=CCO53_RS23635;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 154881 157994 . - . ID=gene-CCO53_RS06930;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=CCO53_RS06930;old_locus_tag=CCO53_06920 NZ_NPLZ01000003.1 Protein Homology CDS 154881 157994 . - 0 ID=cds-WP_001533680.1;Parent=gene-CCO53_RS06930;Dbxref=GenBank:WP_001533680.1;Name=WP_001533680.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=CCO53_RS06930;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001533680.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 158179 159879 . - . ID=gene-CCO53_RS06935;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=CCO53_RS06935;old_locus_tag=CCO53_06925 NZ_NPLZ01000003.1 Protein Homology CDS 158179 159879 . - 0 ID=cds-WP_000216814.1;Parent=gene-CCO53_RS06935;Dbxref=GenBank:WP_000216814.1;Name=WP_000216814.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=CCO53_RS06935;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000216814.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 160065 162026 . + . ID=gene-CCO53_RS06940;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=CCO53_RS06940;old_locus_tag=CCO53_06930 NZ_NPLZ01000003.1 Protein Homology CDS 160065 162026 . + 0 ID=cds-WP_001078937.1;Parent=gene-CCO53_RS06940;Dbxref=GenBank:WP_001078937.1;Name=WP_001078937.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=CCO53_RS06940;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078937.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 162475 163773 . - . ID=gene-CCO53_RS06945;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=CCO53_RS06945;old_locus_tag=CCO53_06935 NZ_NPLZ01000003.1 Protein Homology CDS 162475 163773 . - 0 ID=cds-WP_000673293.1;Parent=gene-CCO53_RS06945;Dbxref=GenBank:WP_000673293.1;Name=WP_000673293.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=CCO53_RS06945;product=penicillin binding protein PBP4B;protein_id=WP_000673293.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 163977 164552 . + . ID=gene-CCO53_RS06950;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=CCO53_RS06950;old_locus_tag=CCO53_06940 NZ_NPLZ01000003.1 Protein Homology CDS 163977 164552 . + 0 ID=cds-WP_000084037.1;Parent=gene-CCO53_RS06950;Dbxref=GenBank:WP_000084037.1;Name=WP_000084037.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=CCO53_RS06950;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084037.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 164677 165720 . + . ID=gene-CCO53_RS06955;Name=CCO53_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06955;old_locus_tag=CCO53_06945 NZ_NPLZ01000003.1 Protein Homology CDS 164677 165720 . + 0 ID=cds-WP_001270670.1;Parent=gene-CCO53_RS06955;Dbxref=GenBank:WP_001270670.1;Name=WP_001270670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=CCO53_RS06955;product=DUF1176 domain-containing protein;protein_id=WP_001270670.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 165848 166078 . + . ID=gene-CCO53_RS06960;Name=CCO53_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS06960;old_locus_tag=CCO53_06950 NZ_NPLZ01000003.1 Protein Homology CDS 165848 166078 . + 0 ID=cds-WP_000700635.1;Parent=gene-CCO53_RS06960;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=CCO53_RS06960;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 166141 168141 . - . ID=gene-CCO53_RS06965;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO53_RS06965;old_locus_tag=CCO53_06955 NZ_NPLZ01000003.1 Protein Homology CDS 166141 168141 . - 0 ID=cds-WP_058821111.1;Parent=gene-CCO53_RS06965;Dbxref=GenBank:WP_058821111.1;Name=WP_058821111.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=CCO53_RS06965;product=transketolase;protein_id=WP_058821111.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 168161 169111 . - . ID=gene-CCO53_RS06970;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO53_RS06970;old_locus_tag=CCO53_06960 NZ_NPLZ01000003.1 Protein Homology CDS 168161 169111 . - 0 ID=cds-WP_001072436.1;Parent=gene-CCO53_RS06970;Dbxref=GenBank:WP_001072436.1;Name=WP_001072436.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=CCO53_RS06970;product=transaldolase;protein_id=WP_001072436.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 169383 171662 . + . ID=gene-CCO53_RS06980;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=CCO53_RS06980;old_locus_tag=CCO53_06970 NZ_NPLZ01000003.1 Protein Homology CDS 169383 171662 . + 0 ID=cds-WP_000344299.1;Parent=gene-CCO53_RS06980;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=CCO53_RS06980;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 172079 172414 . + . ID=gene-CCO53_RS06985;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=CCO53_RS06985;old_locus_tag=CCO53_06975 NZ_NPLZ01000003.1 Protein Homology CDS 172079 172414 . + 0 ID=cds-WP_001031445.1;Parent=gene-CCO53_RS06985;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=CCO53_RS06985;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 172427 172906 . + . ID=gene-CCO53_RS06990;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=CCO53_RS06990;old_locus_tag=CCO53_06980 NZ_NPLZ01000003.1 Protein Homology CDS 172427 172906 . + 0 ID=cds-WP_000820754.1;Parent=gene-CCO53_RS06990;Dbxref=GenBank:WP_000820754.1;Name=WP_000820754.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=CCO53_RS06990;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820754.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 172884 173573 . + . ID=gene-CCO53_RS06995;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=CCO53_RS06995;old_locus_tag=CCO53_06985 NZ_NPLZ01000003.1 Protein Homology CDS 172884 173573 . + 0 ID=cds-WP_000733861.1;Parent=gene-CCO53_RS06995;Dbxref=GenBank:WP_000733861.1;Name=WP_000733861.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=CCO53_RS06995;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733861.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 173570 174373 . + . ID=gene-CCO53_RS07000;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=CCO53_RS07000;old_locus_tag=CCO53_06990 NZ_NPLZ01000003.1 Protein Homology CDS 173570 174373 . + 0 ID=cds-WP_000997650.1;Parent=gene-CCO53_RS07000;Dbxref=GenBank:WP_000997650.1;Name=WP_000997650.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=CCO53_RS07000;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997650.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 174370 175386 . + . ID=gene-CCO53_RS07005;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO53_RS07005;old_locus_tag=CCO53_06995 NZ_NPLZ01000003.1 Protein Homology CDS 174370 175386 . + 0 ID=cds-WP_094887617.1;Parent=gene-CCO53_RS07005;Dbxref=GenBank:WP_094887617.1;Name=WP_094887617.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=CCO53_RS07005;product=phosphate acetyltransferase;protein_id=WP_094887617.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 175427 175717 . + . ID=gene-CCO53_RS07010;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=CCO53_RS07010;old_locus_tag=CCO53_07000 NZ_NPLZ01000003.1 Protein Homology CDS 175427 175717 . + 0 ID=cds-WP_000387716.1;Parent=gene-CCO53_RS07010;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=CCO53_RS07010;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 175830 176117 . + . ID=gene-CCO53_RS07015;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=CCO53_RS07015;old_locus_tag=CCO53_07005 NZ_NPLZ01000003.1 Protein Homology CDS 175830 176117 . + 0 ID=cds-WP_001522340.1;Parent=gene-CCO53_RS07015;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=CCO53_RS07015;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 176129 177532 . + . ID=gene-CCO53_RS07020;Name=CCO53_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07020;old_locus_tag=CCO53_07010 NZ_NPLZ01000003.1 Protein Homology CDS 176129 177532 . + 0 ID=cds-WP_001075640.1;Parent=gene-CCO53_RS07020;Dbxref=GenBank:WP_001075640.1;Name=WP_001075640.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=CCO53_RS07020;product=aldehyde dehydrogenase family protein;protein_id=WP_001075640.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 177543 178382 . + . ID=gene-CCO53_RS07025;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=CCO53_RS07025;old_locus_tag=CCO53_07015 NZ_NPLZ01000003.1 Protein Homology CDS 177543 178382 . + 0 ID=cds-WP_000929675.1;Parent=gene-CCO53_RS07025;Dbxref=GenBank:WP_000929675.1;Name=WP_000929675.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=CCO53_RS07025;product=ethanolamine utilization protein EutJ;protein_id=WP_000929675.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 178372 179559 . + . ID=gene-CCO53_RS07030;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=CCO53_RS07030;old_locus_tag=CCO53_07020 NZ_NPLZ01000003.1 Protein Homology CDS 178372 179559 . + 0 ID=cds-WP_001147501.1;Parent=gene-CCO53_RS07030;Dbxref=GenBank:WP_001147501.1;Name=WP_001147501.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=CCO53_RS07030;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147501.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 179679 180905 . + . ID=gene-CCO53_RS07035;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=CCO53_RS07035;old_locus_tag=CCO53_07025 NZ_NPLZ01000003.1 Protein Homology CDS 179679 180905 . + 0 ID=cds-WP_000512359.1;Parent=gene-CCO53_RS07035;Dbxref=GenBank:WP_000512359.1;Name=WP_000512359.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=CCO53_RS07035;product=ethanolamine utilization protein EutH;protein_id=WP_000512359.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 180902 182305 . + . ID=gene-CCO53_RS07040;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=CCO53_RS07040;old_locus_tag=CCO53_07030 NZ_NPLZ01000003.1 Protein Homology CDS 180902 182305 . + 0 ID=cds-WP_001097518.1;Parent=gene-CCO53_RS07040;Dbxref=GenBank:WP_001097518.1;Name=WP_001097518.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=CCO53_RS07040;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097518.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 182317 183678 . + . ID=gene-CCO53_RS07045;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=CCO53_RS07045;old_locus_tag=CCO53_07035 NZ_NPLZ01000003.1 Protein Homology CDS 182317 183678 . + 0 ID=cds-WP_000769990.1;Parent=gene-CCO53_RS07045;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=CCO53_RS07045;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 183697 184593 . + . ID=gene-CCO53_RS07050;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=CCO53_RS07050;old_locus_tag=CCO53_07040 NZ_NPLZ01000003.1 Protein Homology CDS 183697 184593 . + 0 ID=cds-WP_000372344.1;Parent=gene-CCO53_RS07050;Dbxref=GenBank:WP_000372344.1;Name=WP_000372344.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=CCO53_RS07050;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372344.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 184603 185262 . + . ID=gene-CCO53_RS07055;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=CCO53_RS07055;old_locus_tag=CCO53_07045 NZ_NPLZ01000003.1 Protein Homology CDS 184603 185262 . + 0 ID=cds-WP_001111056.1;Parent=gene-CCO53_RS07055;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=CCO53_RS07055;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 185275 185769 . + . ID=gene-CCO53_RS07060;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=CCO53_RS07060;old_locus_tag=CCO53_07050 NZ_NPLZ01000003.1 Protein Homology CDS 185275 185769 . + 0 ID=cds-WP_000606271.1;Parent=gene-CCO53_RS07060;Dbxref=GenBank:WP_000606271.1;Name=WP_000606271.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=CCO53_RS07060;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606271.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 185817 186869 . + . ID=gene-CCO53_RS07065;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=CCO53_RS07065;old_locus_tag=CCO53_07055 NZ_NPLZ01000003.1 Protein Homology CDS 185817 186869 . + 0 ID=cds-WP_000753666.1;Parent=gene-CCO53_RS07065;Dbxref=GenBank:WP_000753666.1;Name=WP_000753666.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=CCO53_RS07065;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753666.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 187069 188346 . - . ID=gene-CCO53_RS07075;Name=CCO53_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07075;old_locus_tag=CCO53_07065 NZ_NPLZ01000003.1 Protein Homology CDS 187069 188346 . - 0 ID=cds-WP_000344435.1;Parent=gene-CCO53_RS07075;Dbxref=GenBank:WP_000344435.1;Name=WP_000344435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=CCO53_RS07075;product=DUF1963 domain-containing protein;protein_id=WP_000344435.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 188475 188804 . - . ID=gene-CCO53_RS07080;Name=CCO53_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07080;old_locus_tag=CCO53_07070 NZ_NPLZ01000003.1 Protein Homology CDS 188475 188804 . - 0 ID=cds-WP_001194342.1;Parent=gene-CCO53_RS07080;Dbxref=GenBank:WP_001194342.1;Name=WP_001194342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=CCO53_RS07080;product=hypothetical protein;protein_id=WP_001194342.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 188825 189724 . - . ID=gene-CCO53_RS07085;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=CCO53_RS07085;old_locus_tag=CCO53_07075 NZ_NPLZ01000003.1 Protein Homology CDS 188825 189724 . - 0 ID=cds-WP_080160444.1;Parent=gene-CCO53_RS07085;Dbxref=GenBank:WP_080160444.1;Name=WP_080160444.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=CCO53_RS07085;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_080160444.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 189727 190596 . - . ID=gene-CCO53_RS07090;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=CCO53_RS07090;old_locus_tag=CCO53_07080 NZ_NPLZ01000003.1 Protein Homology CDS 189727 190596 . - 0 ID=cds-WP_000102880.1;Parent=gene-CCO53_RS07090;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=CCO53_RS07090;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 190809 191234 . + . ID=gene-CCO53_RS07095;Name=CCO53_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07095;old_locus_tag=CCO53_07085 NZ_NPLZ01000003.1 Protein Homology CDS 190809 191234 . + 0 ID=cds-WP_000406008.1;Parent=gene-CCO53_RS07095;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=CCO53_RS07095;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 191221 191670 . + . ID=gene-CCO53_RS07100;Name=CCO53_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07100;old_locus_tag=CCO53_07090 NZ_NPLZ01000003.1 Protein Homology CDS 191221 191670 . + 0 ID=cds-WP_000842939.1;Parent=gene-CCO53_RS07100;Dbxref=GenBank:WP_000842939.1;Name=WP_000842939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=CCO53_RS07100;product=DUF2919 domain-containing protein;protein_id=WP_000842939.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 191732 192307 . + . ID=gene-CCO53_RS07105;Name=CCO53_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07105;old_locus_tag=CCO53_07095 NZ_NPLZ01000003.1 Protein Homology CDS 191732 192307 . + 0 ID=cds-WP_000838968.1;Parent=gene-CCO53_RS07105;Dbxref=GenBank:WP_000838968.1;Name=WP_000838968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=CCO53_RS07105;product=RpoE-regulated lipoprotein;protein_id=WP_000838968.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 192402 193301 . + . ID=gene-CCO53_RS07110;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=CCO53_RS07110;old_locus_tag=CCO53_07100 NZ_NPLZ01000003.1 Protein Homology CDS 192402 193301 . + 0 ID=cds-WP_000084583.1;Parent=gene-CCO53_RS07110;Dbxref=GenBank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=CCO53_RS07110;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 193539 194330 . + . ID=gene-CCO53_RS07115;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=CCO53_RS07115;old_locus_tag=CCO53_07105 NZ_NPLZ01000003.1 Protein Homology CDS 193539 194330 . + 0 ID=cds-WP_000517460.1;Parent=gene-CCO53_RS07115;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=CCO53_RS07115;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 194488 195504 . + . ID=gene-CCO53_RS07120;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=CCO53_RS07120;old_locus_tag=CCO53_07110 NZ_NPLZ01000003.1 Protein Homology CDS 194488 195504 . + 0 ID=cds-WP_000290274.1;Parent=gene-CCO53_RS07120;Dbxref=GenBank:WP_000290274.1;Name=WP_000290274.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=CCO53_RS07120;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290274.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 195504 196337 . + . ID=gene-CCO53_RS07125;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=CCO53_RS07125;old_locus_tag=CCO53_07115 NZ_NPLZ01000003.1 Protein Homology CDS 195504 196337 . + 0 ID=cds-WP_000881746.1;Parent=gene-CCO53_RS07125;Dbxref=GenBank:WP_000881746.1;Name=WP_000881746.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=CCO53_RS07125;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881746.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 196337 197212 . + . ID=gene-CCO53_RS07130;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=CCO53_RS07130;old_locus_tag=CCO53_07120 NZ_NPLZ01000003.1 Protein Homology CDS 196337 197212 . + 0 ID=cds-WP_000852705.1;Parent=gene-CCO53_RS07130;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=CCO53_RS07130;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 197202 198296 . + . ID=gene-CCO53_RS07135;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=CCO53_RS07135;old_locus_tag=CCO53_07125 NZ_NPLZ01000003.1 Protein Homology CDS 197202 198296 . + 0 ID=cds-WP_000021073.1;Parent=gene-CCO53_RS07135;Dbxref=GenBank:WP_000021073.1;Name=WP_000021073.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=CCO53_RS07135;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021073.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 198417 199328 . + . ID=gene-CCO53_RS07140;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=CCO53_RS07140;old_locus_tag=CCO53_07130 NZ_NPLZ01000003.1 Protein Homology CDS 198417 199328 . + 0 ID=cds-WP_001093890.1;Parent=gene-CCO53_RS07140;Dbxref=GenBank:WP_001093890.1;Name=WP_001093890.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=CCO53_RS07140;product=cysteine synthase CysM;protein_id=WP_001093890.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 199361 199738 . - . ID=gene-CCO53_RS07145;Name=CCO53_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07145;old_locus_tag=CCO53_07135 NZ_NPLZ01000003.1 Protein Homology CDS 199361 199738 . - 0 ID=cds-WP_000710731.1;Parent=gene-CCO53_RS07145;Dbxref=GenBank:WP_000710731.1;Name=WP_000710731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710726.1;locus_tag=CCO53_RS07145;product=YfeK family protein;protein_id=WP_000710731.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 199797 200516 . - . ID=gene-CCO53_RS07150;Name=CCO53_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07150;old_locus_tag=CCO53_07140 NZ_NPLZ01000003.1 Protein Homology CDS 199797 200516 . - 0 ID=cds-WP_001728959.1;Parent=gene-CCO53_RS07150;Dbxref=GenBank:WP_001728959.1;Name=WP_001728959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=CCO53_RS07150;product=GMP synthase;protein_id=WP_001728959.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 200531 201823 . - . ID=gene-CCO53_RS07155;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=CCO53_RS07155;old_locus_tag=CCO53_07145 NZ_NPLZ01000003.1 Protein Homology CDS 200531 201823 . - 0 ID=cds-WP_058331744.1;Parent=gene-CCO53_RS07155;Dbxref=GenBank:WP_058331744.1;Name=WP_058331744.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=CCO53_RS07155;product=transcriptional regulator PtsJ;protein_id=WP_058331744.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 201906 202772 . + . ID=gene-CCO53_RS07160;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=CCO53_RS07160;old_locus_tag=CCO53_07150 NZ_NPLZ01000003.1 Protein Homology CDS 201906 202772 . + 0 ID=cds-WP_058331743.1;Parent=gene-CCO53_RS07160;Dbxref=GenBank:WP_058331743.1;Name=WP_058331743.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=CCO53_RS07160;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_058331743.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 202769 203008 . + . ID=gene-CCO53_RS07165;Name=CCO53_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07165;old_locus_tag=CCO53_07155 NZ_NPLZ01000003.1 Protein Homology CDS 202769 203008 . + 0 ID=cds-WP_000844541.1;Parent=gene-CCO53_RS07165;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=CCO53_RS07165;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 203158 203667 . - . ID=gene-CCO53_RS07170;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=CCO53_RS07170;old_locus_tag=CCO53_07160 NZ_NPLZ01000003.1 Protein Homology CDS 203158 203667 . - 0 ID=cds-WP_000522253.1;Parent=gene-CCO53_RS07170;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=CCO53_RS07170;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 203708 205435 . - . ID=gene-CCO53_RS07175;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=CCO53_RS07175;old_locus_tag=CCO53_07165 NZ_NPLZ01000003.1 Protein Homology CDS 203708 205435 . - 0 ID=cds-WP_000623118.1;Parent=gene-CCO53_RS07175;Dbxref=GenBank:WP_000623118.1;Name=WP_000623118.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=CCO53_RS07175;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623118.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 205484 205741 . - . ID=gene-CCO53_RS07180;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=CCO53_RS07180;old_locus_tag=CCO53_07170 NZ_NPLZ01000003.1 Protein Homology CDS 205484 205741 . - 0 ID=cds-WP_000487600.1;Parent=gene-CCO53_RS07180;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=CCO53_RS07180;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 206125 207096 . - . ID=gene-CCO53_RS07185;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CCO53_RS07185;old_locus_tag=CCO53_07175 NZ_NPLZ01000003.1 Protein Homology CDS 206125 207096 . - 0 ID=cds-WP_000036902.1;Parent=gene-CCO53_RS07185;Dbxref=GenBank:WP_000036902.1;Name=WP_000036902.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=CCO53_RS07185;product=cysteine synthase A;protein_id=WP_000036902.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 207260 208021 . - . ID=gene-CCO53_RS07190;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=CCO53_RS07190;old_locus_tag=CCO53_07180 NZ_NPLZ01000003.1 Protein Homology CDS 207260 208021 . - 0 ID=cds-WP_000255006.1;Parent=gene-CCO53_RS07190;Dbxref=GenBank:WP_000255006.1;Name=WP_000255006.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=CCO53_RS07190;product=sulfate transporter CysZ;protein_id=WP_000255006.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 208253 209239 . + . ID=gene-CCO53_RS07195;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=CCO53_RS07195;old_locus_tag=CCO53_07185 NZ_NPLZ01000003.1 Protein Homology CDS 208253 209239 . + 0 ID=cds-WP_000983126.1;Parent=gene-CCO53_RS07195;Dbxref=GenBank:WP_000983126.1;Name=WP_000983126.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=CCO53_RS07195;product=cell division protein ZipA;protein_id=WP_000983126.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 209311 211326 . + . ID=gene-CCO53_RS07200;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CCO53_RS07200;old_locus_tag=CCO53_07190 NZ_NPLZ01000003.1 Protein Homology CDS 209311 211326 . + 0 ID=cds-WP_058331742.1;Parent=gene-CCO53_RS07200;Dbxref=GenBank:WP_058331742.1;Name=WP_058331742.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=CCO53_RS07200;product=NAD-dependent DNA ligase LigA;protein_id=WP_058331742.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 211328 211546 . + . ID=gene-CCO53_RS07205;Name=CCO53_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07205;old_locus_tag=CCO53_07195 NZ_NPLZ01000003.1 Protein Homology CDS 211328 211546 . + 0 ID=cds-WP_001519708.1;Parent=gene-CCO53_RS07205;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=CCO53_RS07205;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 211543 212541 . - . ID=gene-CCO53_RS07210;Name=CCO53_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07210;old_locus_tag=CCO53_07200 NZ_NPLZ01000003.1 Protein Homology CDS 211543 212541 . - 0 ID=cds-WP_000765580.1;Parent=gene-CCO53_RS07210;Dbxref=GenBank:WP_000765580.1;Name=WP_000765580.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=CCO53_RS07210;product=bile acid:sodium symporter family protein;protein_id=WP_000765580.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 212631 213557 . + . ID=gene-CCO53_RS07215;Name=CCO53_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07215;old_locus_tag=CCO53_07205 NZ_NPLZ01000003.1 Protein Homology CDS 212631 213557 . + 0 ID=cds-WP_001109831.1;Parent=gene-CCO53_RS07215;Dbxref=GenBank:WP_001109831.1;Name=WP_001109831.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=CCO53_RS07215;product=LysR family transcriptional regulator;protein_id=WP_001109831.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 213619 214380 . - . ID=gene-CCO53_RS07220;Name=CCO53_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07220;old_locus_tag=CCO53_07210 NZ_NPLZ01000003.1 Protein Homology CDS 213619 214380 . - 0 ID=cds-WP_000722926.1;Parent=gene-CCO53_RS07220;Dbxref=GenBank:WP_000722926.1;Name=WP_000722926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=CCO53_RS07220;product=outer membrane protein;protein_id=WP_000722926.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 214636 215469 . + . ID=gene-CCO53_RS07225;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=CCO53_RS07225;old_locus_tag=CCO53_07215 NZ_NPLZ01000003.1 Protein Homology CDS 214636 215469 . + 0 ID=cds-WP_001119748.1;Parent=gene-CCO53_RS07225;Dbxref=GenBank:WP_001119748.1;Name=WP_001119748.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=CCO53_RS07225;product=xanthosine phosphorylase;protein_id=WP_001119748.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 215524 216780 . + . ID=gene-CCO53_RS07230;Name=CCO53_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07230;old_locus_tag=CCO53_07220 NZ_NPLZ01000003.1 Protein Homology CDS 215524 216780 . + 0 ID=cds-WP_058331741.1;Parent=gene-CCO53_RS07230;Dbxref=GenBank:WP_058331741.1;Name=WP_058331741.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=CCO53_RS07230;product=nucleoside permease;protein_id=WP_058331741.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 216839 216997 . + . ID=gene-CCO53_RS07235;Name=CCO53_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07235;old_locus_tag=CCO53_07225 NZ_NPLZ01000003.1 Protein Homology CDS 216839 216997 . + 0 ID=cds-WP_000658727.1;Parent=gene-CCO53_RS07235;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=CCO53_RS07235;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 217049 217933 . + . ID=gene-CCO53_RS07240;Name=CCO53_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07240;old_locus_tag=CCO53_07230 NZ_NPLZ01000003.1 Protein Homology CDS 217049 217933 . + 0 ID=cds-WP_000438884.1;Parent=gene-CCO53_RS07240;Dbxref=GenBank:WP_000438884.1;Name=WP_000438884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=CCO53_RS07240;product=LysR family transcriptional regulator;protein_id=WP_000438884.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 218148 218223 . - . ID=gene-CCO53_RS07245;Name=CCO53_RS07245;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS07245;old_locus_tag=CCO53_07235 NZ_NPLZ01000003.1 tRNAscan-SE tRNA 218148 218223 . - . ID=rna-CCO53_RS07245;Parent=gene-CCO53_RS07245;anticodon=(pos:complement(218188..218190));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07245;product=tRNA-Lys NZ_NPLZ01000003.1 tRNAscan-SE exon 218148 218223 . - . ID=exon-CCO53_RS07245-1;Parent=rna-CCO53_RS07245;anticodon=(pos:complement(218188..218190));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07245;product=tRNA-Lys NZ_NPLZ01000003.1 RefSeq gene 218228 218303 . - . ID=gene-CCO53_RS07250;Name=CCO53_RS07250;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS07250;old_locus_tag=CCO53_07240 NZ_NPLZ01000003.1 tRNAscan-SE tRNA 218228 218303 . - . ID=rna-CCO53_RS07250;Parent=gene-CCO53_RS07250;anticodon=(pos:complement(218268..218270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07250;product=tRNA-Val NZ_NPLZ01000003.1 tRNAscan-SE exon 218228 218303 . - . ID=exon-CCO53_RS07250-1;Parent=rna-CCO53_RS07250;anticodon=(pos:complement(218268..218270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07250;product=tRNA-Val NZ_NPLZ01000003.1 RefSeq gene 218347 218422 . - . ID=gene-CCO53_RS07255;Name=CCO53_RS07255;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS07255;old_locus_tag=CCO53_07245 NZ_NPLZ01000003.1 tRNAscan-SE tRNA 218347 218422 . - . ID=rna-CCO53_RS07255;Parent=gene-CCO53_RS07255;anticodon=(pos:complement(218387..218389));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07255;product=tRNA-Val NZ_NPLZ01000003.1 tRNAscan-SE exon 218347 218422 . - . ID=exon-CCO53_RS07255-1;Parent=rna-CCO53_RS07255;anticodon=(pos:complement(218387..218389));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07255;product=tRNA-Val NZ_NPLZ01000003.1 RefSeq gene 218468 218543 . - . ID=gene-CCO53_RS07260;Name=CCO53_RS07260;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS07260;old_locus_tag=CCO53_07250 NZ_NPLZ01000003.1 tRNAscan-SE tRNA 218468 218543 . - . ID=rna-CCO53_RS07260;Parent=gene-CCO53_RS07260;anticodon=(pos:complement(218508..218510));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07260;product=tRNA-Val NZ_NPLZ01000003.1 tRNAscan-SE exon 218468 218543 . - . ID=exon-CCO53_RS07260-1;Parent=rna-CCO53_RS07260;anticodon=(pos:complement(218508..218510));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07260;product=tRNA-Val NZ_NPLZ01000003.1 RefSeq gene 218802 220217 . + . ID=gene-CCO53_RS07265;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CCO53_RS07265;old_locus_tag=CCO53_07255 NZ_NPLZ01000003.1 Protein Homology CDS 218802 220217 . + 0 ID=cds-WP_000695623.1;Parent=gene-CCO53_RS07265;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=CCO53_RS07265;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 220271 220663 . - . ID=gene-CCO53_RS07270;Name=CCO53_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07270;old_locus_tag=CCO53_07260 NZ_NPLZ01000003.1 Protein Homology CDS 220271 220663 . - 0 ID=cds-WP_000826514.1;Parent=gene-CCO53_RS07270;Dbxref=GenBank:WP_000826514.1;Name=WP_000826514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=CCO53_RS07270;product=MerR family transcriptional regulator;protein_id=WP_000826514.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 220665 221027 . - . ID=gene-CCO53_RS07275;Name=CCO53_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07275;old_locus_tag=CCO53_07265 NZ_NPLZ01000003.1 Protein Homology CDS 220665 221027 . - 0 ID=cds-WP_000472034.1;Parent=gene-CCO53_RS07275;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=CCO53_RS07275;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 221249 221324 . + . ID=gene-CCO53_RS07285;Name=CCO53_RS07285;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS07285;old_locus_tag=CCO53_07275 NZ_NPLZ01000003.1 tRNAscan-SE tRNA 221249 221324 . + . ID=rna-CCO53_RS07285;Parent=gene-CCO53_RS07285;anticodon=(pos:221282..221284);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07285;product=tRNA-Ala NZ_NPLZ01000003.1 tRNAscan-SE exon 221249 221324 . + . ID=exon-CCO53_RS07285-1;Parent=rna-CCO53_RS07285;anticodon=(pos:221282..221284);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07285;product=tRNA-Ala NZ_NPLZ01000003.1 RefSeq gene 221367 221442 . + . ID=gene-CCO53_RS07290;Name=CCO53_RS07290;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS07290;old_locus_tag=CCO53_07280 NZ_NPLZ01000003.1 tRNAscan-SE tRNA 221367 221442 . + . ID=rna-CCO53_RS07290;Parent=gene-CCO53_RS07290;anticodon=(pos:221400..221402);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07290;product=tRNA-Ala NZ_NPLZ01000003.1 tRNAscan-SE exon 221367 221442 . + . ID=exon-CCO53_RS07290-1;Parent=rna-CCO53_RS07290;anticodon=(pos:221400..221402);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07290;product=tRNA-Ala NZ_NPLZ01000003.1 RefSeq gene 221633 223822 . + . ID=gene-CCO53_RS07295;Name=CCO53_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07295;old_locus_tag=CCO53_07285 NZ_NPLZ01000003.1 Protein Homology CDS 221633 223822 . + 0 ID=cds-WP_001112941.1;Parent=gene-CCO53_RS07295;Dbxref=GenBank:WP_001112941.1;Name=WP_001112941.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=CCO53_RS07295;product=EAL domain-containing protein;protein_id=WP_001112941.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 223875 225077 . - . ID=gene-CCO53_RS07300;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=CCO53_RS07300;old_locus_tag=CCO53_07290 NZ_NPLZ01000003.1 Protein Homology CDS 223875 225077 . - 0 ID=cds-WP_000376343.1;Parent=gene-CCO53_RS07300;Dbxref=GenBank:WP_000376343.1;Name=WP_000376343.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=CCO53_RS07300;product=nucleoside permease NupC;protein_id=WP_000376343.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 225383 225427 . + . ID=gene-CCO53_RS24350;Name=CCO53_RS24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24350 NZ_NPLZ01000003.1 Protein Homology CDS 225383 225427 . + 0 ID=cds-WP_418338175.1;Parent=gene-CCO53_RS24350;Dbxref=GenBank:WP_418338175.1;Name=WP_418338175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=CCO53_RS24350;product=hypothetical protein;protein_id=WP_418338175.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 225420 226661 . + . ID=gene-CCO53_RS07305;Name=CCO53_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07305;old_locus_tag=CCO53_07295 NZ_NPLZ01000003.1 Protein Homology CDS 225420 226661 . + 0 ID=cds-WP_000131734.1;Parent=gene-CCO53_RS07305;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=CCO53_RS07305;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 226722 227048 . - . ID=gene-CCO53_RS07310;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=CCO53_RS07310;old_locus_tag=CCO53_07300 NZ_NPLZ01000003.1 Protein Homology CDS 226722 227048 . - 0 ID=cds-WP_000490096.1;Parent=gene-CCO53_RS07310;Dbxref=GenBank:WP_000490096.1;Name=WP_000490096.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=CCO53_RS07310;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490096.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 227162 228160 . - . ID=gene-CCO53_RS07315;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CCO53_RS07315;old_locus_tag=CCO53_07305 NZ_NPLZ01000003.1 Protein Homology CDS 227162 228160 . - 0 ID=cds-WP_058331740.1;Parent=gene-CCO53_RS07315;Dbxref=GenBank:WP_058331740.1;Name=WP_058331740.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=CCO53_RS07315;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_058331740.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 228340 229992 . + . ID=gene-CCO53_RS07320;Name=CCO53_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07320;old_locus_tag=CCO53_07310 NZ_NPLZ01000003.1 Protein Homology CDS 228340 229992 . + 0 ID=cds-WP_080160110.1;Parent=gene-CCO53_RS07320;Dbxref=GenBank:WP_080160110.1;Name=WP_080160110.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=CCO53_RS07320;product=alpha-keto acid decarboxylase family protein;protein_id=WP_080160110.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 230012 231247 . - . ID=gene-CCO53_RS07325;Name=CCO53_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07325;old_locus_tag=CCO53_07315 NZ_NPLZ01000003.1 Protein Homology CDS 230012 231247 . - 0 ID=cds-WP_000468922.1;Parent=gene-CCO53_RS07325;Dbxref=GenBank:WP_000468922.1;Name=WP_000468922.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=CCO53_RS07325;product=ion channel protein;protein_id=WP_000468922.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 231451 232416 . + . ID=gene-CCO53_RS07330;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=CCO53_RS07330;old_locus_tag=CCO53_07320 NZ_NPLZ01000003.1 Protein Homology CDS 231451 232416 . + 0 ID=cds-WP_000170380.1;Parent=gene-CCO53_RS07330;Dbxref=GenBank:WP_000170380.1;Name=WP_000170380.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=CCO53_RS07330;product=glucokinase;protein_id=WP_000170380.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 233137 234375 . + . ID=gene-CCO53_RS07335;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=CCO53_RS07335;old_locus_tag=CCO53_07325 NZ_NPLZ01000003.1 Protein Homology CDS 233137 234375 . + 0 ID=cds-WP_000763118.1;Parent=gene-CCO53_RS07335;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=CCO53_RS07335;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 234425 234496 . - . ID=gene-CCO53_RS07340;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=CCO53_RS07340;old_locus_tag=CCO53_07330 NZ_NPLZ01000003.1 Protein Homology CDS 234425 234496 . - 0 ID=cds-WP_010723117.1;Parent=gene-CCO53_RS07340;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=CCO53_RS07340;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 234899 235819 . - . ID=gene-CCO53_RS07345;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=CCO53_RS07345;old_locus_tag=CCO53_07335 NZ_NPLZ01000003.1 Protein Homology CDS 234899 235819 . - 0 ID=cds-WP_000484431.1;Parent=gene-CCO53_RS07345;Dbxref=GenBank:WP_000484431.1;Name=WP_000484431.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=CCO53_RS07345;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484431.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 236341 236583 . + . ID=gene-CCO53_RS07350;Name=CCO53_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07350;old_locus_tag=CCO53_07340 NZ_NPLZ01000003.1 Protein Homology CDS 236341 236583 . + 0 ID=cds-WP_000639889.1;Parent=gene-CCO53_RS07350;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=CCO53_RS07350;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 236822 238213 . - . ID=gene-CCO53_RS07355;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=CCO53_RS07355;old_locus_tag=CCO53_07345 NZ_NPLZ01000003.1 Protein Homology CDS 236822 238213 . - 0 ID=cds-WP_000955747.1;Parent=gene-CCO53_RS07355;Dbxref=GenBank:WP_000955747.1;Name=WP_000955747.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=CCO53_RS07355;product=phosphoglycerate transporter PgtP;protein_id=WP_000955747.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 238649 239842 . + . ID=gene-CCO53_RS07365;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=CCO53_RS07365;old_locus_tag=CCO53_07355 NZ_NPLZ01000003.1 Protein Homology CDS 238649 239842 . + 0 ID=cds-WP_000467983.1;Parent=gene-CCO53_RS07365;Dbxref=GenBank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=CCO53_RS07365;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 239839 241845 . + . ID=gene-CCO53_RS07370;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=CCO53_RS07370;old_locus_tag=CCO53_07360 NZ_NPLZ01000003.1 Protein Homology CDS 239839 241845 . + 0 ID=cds-WP_000678493.1;Parent=gene-CCO53_RS07370;Dbxref=GenBank:WP_000678493.1;Name=WP_000678493.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=CCO53_RS07370;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000678493.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 241835 243082 . + . ID=gene-CCO53_RS07375;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=CCO53_RS07375;old_locus_tag=CCO53_07365 NZ_NPLZ01000003.1 Protein Homology CDS 241835 243082 . + 0 ID=cds-WP_000930843.1;Parent=gene-CCO53_RS07375;Dbxref=GenBank:WP_000930843.1;Name=WP_000930843.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=CCO53_RS07375;product=two-component system response regulator PgtA;protein_id=WP_000930843.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 243350 244288 . + . ID=gene-CCO53_RS07380;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=CCO53_RS07380;old_locus_tag=CCO53_07370 NZ_NPLZ01000003.1 Protein Homology CDS 243350 244288 . + 0 ID=cds-WP_000716014.1;Parent=gene-CCO53_RS07380;Dbxref=GenBank:WP_000716014.1;Name=WP_000716014.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=CCO53_RS07380;product=omptin family outer membrane protease PgtE;protein_id=WP_000716014.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 244445 244519 . - . ID=gene-CCO53_RS07385;Name=CCO53_RS07385;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS07385;old_locus_tag=CCO53_07375 NZ_NPLZ01000003.1 tRNAscan-SE tRNA 244445 244519 . - . ID=rna-CCO53_RS07385;Parent=gene-CCO53_RS07385;anticodon=(pos:complement(244484..244486));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07385;product=tRNA-Arg NZ_NPLZ01000003.1 tRNAscan-SE exon 244445 244519 . - . ID=exon-CCO53_RS07385-1;Parent=rna-CCO53_RS07385;anticodon=(pos:complement(244484..244486));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS07385;product=tRNA-Arg NZ_NPLZ01000003.1 RefSeq gene 244595 245536 . - . ID=gene-CCO53_RS07390;Name=CCO53_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07390;old_locus_tag=CCO53_07380 NZ_NPLZ01000003.1 Protein Homology CDS 244595 245536 . - 0 ID=cds-WP_094887618.1;Parent=gene-CCO53_RS07390;Dbxref=GenBank:WP_094887618.1;Name=WP_094887618.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=CCO53_RS07390;product=formate/nitrite transporter family protein;protein_id=WP_094887618.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 245825 246580 . + . ID=gene-CCO53_RS07395;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=CCO53_RS07395;old_locus_tag=CCO53_07385 NZ_NPLZ01000003.1 Protein Homology CDS 245825 246580 . + 0 ID=cds-WP_000776787.1;Parent=gene-CCO53_RS07395;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=CCO53_RS07395;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 246641 247948 . - . ID=gene-CCO53_RS07400;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=CCO53_RS07400;old_locus_tag=CCO53_07390 NZ_NPLZ01000003.1 Protein Homology CDS 246641 247948 . - 0 ID=cds-WP_001518618.1;Parent=gene-CCO53_RS07400;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=CCO53_RS07400;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 248319 248603 . + . ID=gene-CCO53_RS07405;Name=CCO53_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07405;old_locus_tag=CCO53_07395 NZ_NPLZ01000003.1 Protein Homology CDS 248319 248603 . + 0 ID=cds-WP_000030904.1;Parent=gene-CCO53_RS07405;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=CCO53_RS07405;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 248781 250091 . + . ID=gene-CCO53_RS07410;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=CCO53_RS07410;old_locus_tag=CCO53_07400 NZ_NPLZ01000003.1 Protein Homology CDS 248781 250091 . + 0 ID=cds-WP_080160109.1;Parent=gene-CCO53_RS07410;Dbxref=GenBank:WP_080160109.1;Name=WP_080160109.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=CCO53_RS07410;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_080160109.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 250091 252238 . + . ID=gene-CCO53_RS07415;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=CCO53_RS07415;old_locus_tag=CCO53_07405 NZ_NPLZ01000003.1 Protein Homology CDS 250091 252238 . + 0 ID=cds-WP_000214145.1;Parent=gene-CCO53_RS07415;Dbxref=GenBank:WP_000214145.1;Name=WP_000214145.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=CCO53_RS07415;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000214145.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 252447 252932 . + . ID=gene-CCO53_RS07420;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=CCO53_RS07420;old_locus_tag=CCO53_07410 NZ_NPLZ01000003.1 Protein Homology CDS 252447 252932 . + 0 ID=cds-WP_001195801.1;Parent=gene-CCO53_RS07420;Dbxref=GenBank:WP_001195801.1;Name=WP_001195801.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=CCO53_RS07420;product=phosphohistidine phosphatase SixA;protein_id=WP_001195801.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 253032 253583 . - . ID=gene-CCO53_RS07425;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=CCO53_RS07425;old_locus_tag=CCO53_07415 NZ_NPLZ01000003.1 Protein Homology CDS 253032 253583 . - 0 ID=cds-WP_000730794.1;Parent=gene-CCO53_RS07425;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=CCO53_RS07425;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 253749 254681 . + . ID=gene-CCO53_RS07430;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=CCO53_RS07430;old_locus_tag=CCO53_07420 NZ_NPLZ01000003.1 Protein Homology CDS 253749 254681 . + 0 ID=cds-WP_001542329.1;Parent=gene-CCO53_RS07430;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=CCO53_RS07430;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 254717 255802 . + . ID=gene-CCO53_RS07435;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CCO53_RS07435;old_locus_tag=CCO53_07425 NZ_NPLZ01000003.1 Protein Homology CDS 254717 255802 . + 0 ID=cds-WP_000918456.1;Parent=gene-CCO53_RS07435;Dbxref=GenBank:WP_000918456.1;Name=WP_000918456.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=CCO53_RS07435;product=chorismate synthase;protein_id=WP_000918456.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 255806 256630 . + . ID=gene-CCO53_RS07440;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=CCO53_RS07440;old_locus_tag=CCO53_07430 NZ_NPLZ01000003.1 Protein Homology CDS 255806 256630 . + 0 ID=cds-WP_000750429.1;Parent=gene-CCO53_RS07440;Dbxref=GenBank:WP_000750429.1;Name=WP_000750429.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=CCO53_RS07440;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750429.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 256630 257439 . + . ID=gene-CCO53_RS07445;Name=CCO53_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07445;old_locus_tag=CCO53_07435 NZ_NPLZ01000003.1 Protein Homology CDS 256630 257439 . + 0 ID=cds-WP_000368599.1;Parent=gene-CCO53_RS07445;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=CCO53_RS07445;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 257439 257987 . + . ID=gene-CCO53_RS07450;Name=CCO53_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07450;old_locus_tag=CCO53_07440 NZ_NPLZ01000003.1 Protein Homology CDS 257439 257987 . + 0 ID=cds-WP_080198475.1;Parent=gene-CCO53_RS07450;Dbxref=GenBank:WP_080198475.1;Name=WP_080198475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=CCO53_RS07450;product=elongation factor P hydroxylase;protein_id=WP_080198475.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 258020 258295 . + . ID=gene-CCO53_RS07455;Name=CCO53_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07455;old_locus_tag=CCO53_07445 NZ_NPLZ01000003.1 Protein Homology CDS 258020 258295 . + 0 ID=cds-WP_000559749.1;Parent=gene-CCO53_RS07455;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=CCO53_RS07455;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 258347 260347 . - . ID=gene-CCO53_RS07460;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=CCO53_RS07460;old_locus_tag=CCO53_07450 NZ_NPLZ01000003.1 Protein Homology CDS 258347 260347 . - 0 ID=cds-WP_176456337.1;Parent=gene-CCO53_RS07460;Dbxref=GenBank:WP_176456337.1;Name=WP_176456337.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=CCO53_RS07460;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_176456337.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 260507 261721 . + . ID=gene-CCO53_RS07465;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=CCO53_RS07465;old_locus_tag=CCO53_07455 NZ_NPLZ01000003.1 Protein Homology CDS 260507 261721 . + 0 ID=cds-WP_000817161.1;Parent=gene-CCO53_RS07465;Dbxref=GenBank:WP_000817161.1;Name=WP_000817161.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=CCO53_RS07465;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 261819 262475 . + . ID=gene-CCO53_RS07470;Name=CCO53_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07470;old_locus_tag=CCO53_07460 NZ_NPLZ01000003.1 Protein Homology CDS 261819 262475 . + 0 ID=cds-WP_001142914.1;Parent=gene-CCO53_RS07470;Dbxref=GenBank:WP_001142914.1;Name=WP_001142914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=CCO53_RS07470;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142914.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 262542 263060 . - . ID=gene-CCO53_RS07475;Name=CCO53_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07475;old_locus_tag=CCO53_07465 NZ_NPLZ01000003.1 Protein Homology CDS 262542 263060 . - 0 ID=cds-WP_061372005.1;Parent=gene-CCO53_RS07475;Dbxref=GenBank:WP_061372005.1;Name=WP_061372005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=CCO53_RS07475;product=YbjP/YqhG family protein;protein_id=WP_061372005.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 263060 263428 . - . ID=gene-CCO53_RS07480;Name=CCO53_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07480;old_locus_tag=CCO53_07470 NZ_NPLZ01000003.1 Protein Homology CDS 263060 263428 . - 0 ID=cds-WP_000118257.1;Parent=gene-CCO53_RS07480;Dbxref=GenBank:WP_000118257.1;Name=WP_000118257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=CCO53_RS07480;product=NlpC/P60 family protein;protein_id=WP_000118257.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 263597 263845 . - . ID=gene-CCO53_RS07485;Name=CCO53_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07485;old_locus_tag=CCO53_07475 NZ_NPLZ01000003.1 Protein Homology CDS 263597 263845 . - 0 ID=cds-WP_000433426.1;Parent=gene-CCO53_RS07485;Dbxref=GenBank:WP_000433426.1;Name=WP_000433426.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=CCO53_RS07485;product=helix-turn-helix domain-containing protein;protein_id=WP_000433426.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 264018 264392 . + . ID=gene-CCO53_RS07490;Name=CCO53_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07490;old_locus_tag=CCO53_07480 NZ_NPLZ01000003.1 Protein Homology CDS 264018 264392 . + 0 ID=cds-WP_001051266.1;Parent=gene-CCO53_RS07490;Dbxref=GenBank:WP_001051266.1;Name=WP_001051266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=CCO53_RS07490;product=hypothetical protein;protein_id=WP_001051266.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 264572 265750 . + . ID=gene-CCO53_RS07495;Name=CCO53_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07495;old_locus_tag=CCO53_07485 NZ_NPLZ01000003.1 Protein Homology CDS 264572 265750 . + 0 ID=cds-WP_001533705.1;Parent=gene-CCO53_RS07495;Dbxref=GenBank:WP_001533705.1;Name=WP_001533705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=CCO53_RS07495;product=MFS transporter;protein_id=WP_001533705.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 265747 266748 . - . ID=gene-CCO53_RS07500;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=CCO53_RS07500;old_locus_tag=CCO53_07490 NZ_NPLZ01000003.1 Protein Homology CDS 265747 266748 . - 0 ID=cds-WP_000553395.1;Parent=gene-CCO53_RS07500;Dbxref=GenBank:WP_000553395.1;Name=WP_000553395.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=CCO53_RS07500;product=flagella biosynthesis regulator Flk;protein_id=WP_000553395.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 266852 267988 . + . ID=gene-CCO53_RS07505;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=CCO53_RS07505;old_locus_tag=CCO53_07495 NZ_NPLZ01000003.1 Protein Homology CDS 266852 267988 . + 0 ID=cds-WP_000699176.1;Parent=gene-CCO53_RS07505;Dbxref=GenBank:WP_000699176.1;Name=WP_000699176.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=CCO53_RS07505;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699176.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 268056 269069 . + . ID=gene-CCO53_RS07510;Name=CCO53_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07510;old_locus_tag=CCO53_07500 NZ_NPLZ01000003.1 Protein Homology CDS 268056 269069 . + 0 ID=cds-WP_001289141.1;Parent=gene-CCO53_RS07510;Dbxref=GenBank:WP_001289141.1;Name=WP_001289141.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=CCO53_RS07510;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289141.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 269069 269881 . + . ID=gene-CCO53_RS07515;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CCO53_RS07515;old_locus_tag=CCO53_07505 NZ_NPLZ01000003.1 Protein Homology CDS 269069 269881 . + 0 ID=cds-WP_000016631.1;Parent=gene-CCO53_RS07515;Dbxref=GenBank:WP_000016631.1;Name=WP_000016631.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=CCO53_RS07515;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016631.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 269930 270589 . + . ID=gene-CCO53_RS07520;Name=CCO53_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07520;old_locus_tag=CCO53_07510 NZ_NPLZ01000003.1 Protein Homology CDS 269930 270589 . + 0 ID=cds-WP_000364318.1;Parent=gene-CCO53_RS07520;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=CCO53_RS07520;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 270739 271653 . + . ID=gene-CCO53_RS07525;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CCO53_RS07525;old_locus_tag=CCO53_07515 NZ_NPLZ01000003.1 Protein Homology CDS 270739 271653 . + 0 ID=cds-WP_000118383.1;Parent=gene-CCO53_RS07525;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=CCO53_RS07525;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 271721 272989 . + . ID=gene-CCO53_RS07530;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=CCO53_RS07530;old_locus_tag=CCO53_07520 NZ_NPLZ01000003.1 Protein Homology CDS 271721 272989 . + 0 ID=cds-WP_023223767.1;Parent=gene-CCO53_RS07530;Dbxref=GenBank:WP_023223767.1;Name=WP_023223767.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=CCO53_RS07530;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_023223767.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 272979 273653 . + . ID=gene-CCO53_RS07535;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=CCO53_RS07535;old_locus_tag=CCO53_07525 NZ_NPLZ01000003.1 Protein Homology CDS 272979 273653 . + 0 ID=cds-WP_080207866.1;Parent=gene-CCO53_RS07535;Dbxref=GenBank:WP_080207866.1;Name=WP_080207866.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=CCO53_RS07535;product=cell division protein DedD;protein_id=WP_080207866.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 273964 274452 . + . ID=gene-CCO53_RS07540;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=CCO53_RS07540;old_locus_tag=CCO53_07530 NZ_NPLZ01000003.1 Protein Homology CDS 273964 274452 . + 0 ID=cds-WP_000262102.1;Parent=gene-CCO53_RS07540;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=CCO53_RS07540;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 274490 276007 . + . ID=gene-CCO53_RS07545;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CCO53_RS07545;old_locus_tag=CCO53_07535 NZ_NPLZ01000003.1 Protein Homology CDS 274490 276007 . + 0 ID=cds-WP_000334205.1;Parent=gene-CCO53_RS07545;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=CCO53_RS07545;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 276043 277470 . - . ID=gene-CCO53_RS07550;Name=CCO53_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07550;old_locus_tag=CCO53_07540 NZ_NPLZ01000003.1 Protein Homology CDS 276043 277470 . - 0 ID=cds-WP_000168925.1;Parent=gene-CCO53_RS07550;Dbxref=GenBank:WP_000168925.1;Name=WP_000168925.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=CCO53_RS07550;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168925.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 277681 279078 . + . ID=gene-CCO53_RS07555;Name=CCO53_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07555;old_locus_tag=CCO53_07545 NZ_NPLZ01000003.1 Protein Homology CDS 277681 279078 . + 0 ID=cds-WP_000132306.1;Parent=gene-CCO53_RS07555;Dbxref=GenBank:WP_000132306.1;Name=WP_000132306.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=CCO53_RS07555;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132306.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 279169 280590 . + . ID=gene-CCO53_RS07560;Name=CCO53_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07560;old_locus_tag=CCO53_07550 NZ_NPLZ01000003.1 Protein Homology CDS 279169 280590 . + 0 ID=cds-WP_000072512.1;Parent=gene-CCO53_RS07560;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=CCO53_RS07560;product=APC family permease;protein_id=WP_000072512.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 280592 281695 . + . ID=gene-CCO53_RS07565;Name=CCO53_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07565;old_locus_tag=CCO53_07555 NZ_NPLZ01000003.1 Protein Homology CDS 280592 281695 . + 0 ID=cds-WP_000281907.1;Parent=gene-CCO53_RS07565;Dbxref=GenBank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=CCO53_RS07565;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 281759 283165 . + . ID=gene-CCO53_RS07570;Name=CCO53_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07570;old_locus_tag=CCO53_07560 NZ_NPLZ01000003.1 Protein Homology CDS 281759 283165 . + 0 ID=cds-WP_080198108.1;Parent=gene-CCO53_RS07570;Dbxref=GenBank:WP_080198108.1;Name=WP_080198108.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=CCO53_RS07570;product=amino acid permease;protein_id=WP_080198108.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 283192 283761 . + . ID=gene-CCO53_RS07575;Name=CCO53_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07575;old_locus_tag=CCO53_07565 NZ_NPLZ01000003.1 Protein Homology CDS 283192 283761 . + 0 ID=cds-WP_000825684.1;Parent=gene-CCO53_RS07575;Dbxref=GenBank:WP_000825684.1;Name=WP_000825684.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=CCO53_RS07575;product=UbiX family flavin prenyltransferase;protein_id=WP_000825684.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 284050 284832 . + . ID=gene-CCO53_RS07585;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=CCO53_RS07585;old_locus_tag=CCO53_07575 NZ_NPLZ01000003.1 Protein Homology CDS 284050 284832 . + 0 ID=cds-WP_000754423.1;Parent=gene-CCO53_RS07585;Dbxref=GenBank:WP_000754423.1;Name=WP_000754423.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=CCO53_RS07585;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754423.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 285070 285852 . + . ID=gene-CCO53_RS07590;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=CCO53_RS07590;old_locus_tag=CCO53_07580 NZ_NPLZ01000003.1 Protein Homology CDS 285070 285852 . + 0 ID=cds-WP_000731868.1;Parent=gene-CCO53_RS07590;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=CCO53_RS07590;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 286035 286721 . + . ID=gene-CCO53_RS07595;Name=CCO53_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07595;old_locus_tag=CCO53_07585 NZ_NPLZ01000003.1 Protein Homology CDS 286035 286721 . + 0 ID=cds-WP_000965500.1;Parent=gene-CCO53_RS07595;Dbxref=GenBank:WP_000965500.1;Name=WP_000965500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=CCO53_RS07595;product=histidine ABC transporter permease HisQ;protein_id=WP_000965500.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 286718 287425 . + . ID=gene-CCO53_RS07600;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=CCO53_RS07600;old_locus_tag=CCO53_07590 NZ_NPLZ01000003.1 Protein Homology CDS 286718 287425 . + 0 ID=cds-WP_000569771.1;Parent=gene-CCO53_RS07600;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=CCO53_RS07600;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 287439 288212 . + . ID=gene-CCO53_RS07605;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=CCO53_RS07605;old_locus_tag=CCO53_07595 NZ_NPLZ01000003.1 Protein Homology CDS 287439 288212 . + 0 ID=cds-WP_001293591.1;Parent=gene-CCO53_RS07605;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=CCO53_RS07605;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 288264 289157 . - . ID=gene-CCO53_RS07610;Name=CCO53_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07610;old_locus_tag=CCO53_07600 NZ_NPLZ01000003.1 Protein Homology CDS 288264 289157 . - 0 ID=cds-WP_001166274.1;Parent=gene-CCO53_RS07610;Dbxref=GenBank:WP_001166274.1;Name=WP_001166274.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=CCO53_RS07610;product=TIGR01777 family oxidoreductase;protein_id=WP_001166274.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 289283 289930 . - . ID=gene-CCO53_RS07615;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=CCO53_RS07615;old_locus_tag=CCO53_07605 NZ_NPLZ01000003.1 Protein Homology CDS 289283 289930 . - 0 ID=cds-WP_000566562.1;Parent=gene-CCO53_RS07615;Dbxref=GenBank:WP_000566562.1;Name=WP_000566562.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=CCO53_RS07615;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566562.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 290073 290717 . + . ID=gene-CCO53_RS07620;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=CCO53_RS07620;old_locus_tag=CCO53_07610 NZ_NPLZ01000003.1 Protein Homology CDS 290073 290717 . + 0 ID=cds-WP_000043010.1;Parent=gene-CCO53_RS07620;Dbxref=GenBank:WP_000043010.1;Name=WP_000043010.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=CCO53_RS07620;product=glutathione transferase;protein_id=WP_000043010.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 290773 291324 . + . ID=gene-CCO53_RS07625;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=CCO53_RS07625;old_locus_tag=CCO53_07615 NZ_NPLZ01000003.1 Protein Homology CDS 290773 291324 . + 0 ID=cds-WP_000772458.1;Parent=gene-CCO53_RS07625;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=CCO53_RS07625;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 291381 291935 . + . ID=gene-CCO53_RS07630;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=CCO53_RS07630;old_locus_tag=CCO53_07620 NZ_NPLZ01000003.1 Protein Homology CDS 291381 291935 . + 0 ID=cds-WP_000230215.1;Parent=gene-CCO53_RS07630;Dbxref=GenBank:WP_000230215.1;Name=WP_000230215.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=CCO53_RS07630;product=NUDIX hydrolase YfcD;protein_id=WP_000230215.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 291941 292960 . - . ID=gene-CCO53_RS07635;Name=CCO53_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07635;old_locus_tag=CCO53_07625 NZ_NPLZ01000003.1 Protein Homology CDS 291941 292960 . - 0 ID=cds-WP_000026949.1;Parent=gene-CCO53_RS07635;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=CCO53_RS07635;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 293213 293656 . + . ID=gene-CCO53_RS07645;Name=CCO53_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07645;old_locus_tag=CCO53_07635 NZ_NPLZ01000003.1 Protein Homology CDS 293213 293656 . + 0 ID=cds-WP_000901810.1;Parent=gene-CCO53_RS07645;Dbxref=GenBank:WP_000901810.1;Name=WP_000901810.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=CCO53_RS07645;product=PTS sugar transporter subunit IIA;protein_id=WP_000901810.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 293737 294009 . + . ID=gene-CCO53_RS07650;Name=CCO53_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07650;old_locus_tag=CCO53_07640 NZ_NPLZ01000003.1 Protein Homology CDS 293737 294009 . + 0 ID=cds-WP_000699818.1;Parent=gene-CCO53_RS07650;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=CCO53_RS07650;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 294030 295421 . + . ID=gene-CCO53_RS07655;Name=CCO53_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07655;old_locus_tag=CCO53_07645 NZ_NPLZ01000003.1 Protein Homology CDS 294030 295421 . + 0 ID=cds-WP_001522266.1;Parent=gene-CCO53_RS07655;Dbxref=GenBank:WP_001522266.1;Name=WP_001522266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=CCO53_RS07655;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001522266.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 295418 296248 . + . ID=gene-CCO53_RS07660;Name=CCO53_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07660;old_locus_tag=CCO53_07650 NZ_NPLZ01000003.1 Protein Homology CDS 295418 296248 . + 0 ID=cds-WP_001103256.1;Parent=gene-CCO53_RS07660;Dbxref=GenBank:WP_001103256.1;Name=WP_001103256.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=CCO53_RS07660;product=transketolase;protein_id=WP_001103256.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 296241 297194 . + . ID=gene-CCO53_RS07665;Name=CCO53_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07665;old_locus_tag=CCO53_07655 NZ_NPLZ01000003.1 Protein Homology CDS 296241 297194 . + 0 ID=cds-WP_000593030.1;Parent=gene-CCO53_RS07665;Dbxref=GenBank:WP_000593030.1;Name=WP_000593030.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=CCO53_RS07665;product=transketolase family protein;protein_id=WP_000593030.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 297243 298763 . - . ID=gene-CCO53_RS07670;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=CCO53_RS07670;old_locus_tag=CCO53_07660 NZ_NPLZ01000003.1 Protein Homology CDS 297243 298763 . - 0 ID=cds-WP_000117932.1;Parent=gene-CCO53_RS07670;Dbxref=GenBank:WP_000117932.1;Name=WP_000117932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=CCO53_RS07670;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117932.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 298981 301125 . - . ID=gene-CCO53_RS07675;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO53_RS07675;old_locus_tag=CCO53_07665 NZ_NPLZ01000003.1 Protein Homology CDS 298981 301125 . - 0 ID=cds-WP_000086692.1;Parent=gene-CCO53_RS07675;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=CCO53_RS07675;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 301202 302404 . - . ID=gene-CCO53_RS07680;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=CCO53_RS07680;old_locus_tag=CCO53_07670 NZ_NPLZ01000003.1 Protein Homology CDS 301202 302404 . - 0 ID=cds-WP_000095692.1;Parent=gene-CCO53_RS07680;Dbxref=GenBank:WP_000095692.1;Name=WP_000095692.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=CCO53_RS07680;product=acetate kinase;protein_id=WP_000095692.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 302744 303199 . + . ID=gene-CCO53_RS07685;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=CCO53_RS07685;old_locus_tag=CCO53_07675 NZ_NPLZ01000003.1 Protein Homology CDS 302744 303199 . + 0 ID=cds-WP_000106617.1;Parent=gene-CCO53_RS07685;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=CCO53_RS07685;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 303282 303776 . + . ID=gene-CCO53_RS07690;Name=CCO53_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07690;old_locus_tag=CCO53_07680 NZ_NPLZ01000003.1 Protein Homology CDS 303282 303776 . + 0 ID=cds-WP_000426137.1;Parent=gene-CCO53_RS07690;Dbxref=GenBank:WP_000426137.1;Name=WP_000426137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=CCO53_RS07690;product=YfbU family protein;protein_id=WP_000426137.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 303769 304446 . + . ID=gene-CCO53_RS07695;Name=CCO53_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07695;old_locus_tag=CCO53_07685 NZ_NPLZ01000003.1 Protein Homology CDS 303769 304446 . + 0 ID=cds-WP_001555201.1;Parent=gene-CCO53_RS07695;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=CCO53_RS07695;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 304523 306349 . + . ID=gene-CCO53_RS07700;Name=CCO53_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07700;old_locus_tag=CCO53_07690 NZ_NPLZ01000003.1 Protein Homology CDS 304523 306349 . + 0 ID=cds-WP_094887620.1;Parent=gene-CCO53_RS07700;Dbxref=GenBank:WP_094887620.1;Name=WP_094887620.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=CCO53_RS07700;product=SLC13 family permease;protein_id=WP_094887620.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 306440 307039 . - . ID=gene-CCO53_RS07705;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=CCO53_RS07705;old_locus_tag=CCO53_07695 NZ_NPLZ01000003.1 Protein Homology CDS 306440 307039 . - 0 ID=cds-WP_000813882.1;Parent=gene-CCO53_RS07705;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=CCO53_RS07705;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 307133 308347 . - . ID=gene-CCO53_RS07710;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=CCO53_RS07710;old_locus_tag=CCO53_07700 NZ_NPLZ01000003.1 Protein Homology CDS 307133 308347 . - 0 ID=cds-WP_000074540.1;Parent=gene-CCO53_RS07710;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=CCO53_RS07710;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 309279 310217 . + . ID=gene-CCO53_RS07720;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=CCO53_RS07720;old_locus_tag=CCO53_07710 NZ_NPLZ01000003.1 Protein Homology CDS 309279 310217 . + 0 ID=cds-WP_000606288.1;Parent=gene-CCO53_RS07720;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=CCO53_RS07720;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 310297 310449 . + . ID=gene-CCO53_RS07725;Name=CCO53_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07725;old_locus_tag=CCO53_07715 NZ_NPLZ01000003.1 Protein Homology CDS 310297 310449 . + 0 ID=cds-WP_001121022.1;Parent=gene-CCO53_RS07725;Dbxref=GenBank:WP_001121022.1;Name=WP_001121022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=CCO53_RS07725;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001121022.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 310844 311287 . + . ID=gene-CCO53_RS07730;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=CCO53_RS07730;old_locus_tag=CCO53_07720 NZ_NPLZ01000003.1 Protein Homology CDS 310844 311287 . + 0 ID=cds-WP_000062993.1;Parent=gene-CCO53_RS07730;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=CCO53_RS07730;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 311303 311965 . + . ID=gene-CCO53_RS07735;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=CCO53_RS07735;old_locus_tag=CCO53_07725 NZ_NPLZ01000003.1 Protein Homology CDS 311303 311965 . + 0 ID=cds-WP_000386728.1;Parent=gene-CCO53_RS07735;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=CCO53_RS07735;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 312052 313854 . + . ID=gene-CCO53_RS07740;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=CCO53_RS07740;old_locus_tag=CCO53_07730 NZ_NPLZ01000003.1 Protein Homology CDS 312052 313854 . + 0 ID=cds-WP_000247855.1;Parent=gene-CCO53_RS07740;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=CCO53_RS07740;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 313857 314357 . + . ID=gene-CCO53_RS07745;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=CCO53_RS07745;old_locus_tag=CCO53_07735 NZ_NPLZ01000003.1 Protein Homology CDS 313857 314357 . + 0 ID=cds-WP_000545038.1;Parent=gene-CCO53_RS07745;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=CCO53_RS07745;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 314354 315691 . + . ID=gene-CCO53_RS07750;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=CCO53_RS07750;old_locus_tag=CCO53_07740 NZ_NPLZ01000003.1 Protein Homology CDS 314354 315691 . + 0 ID=cds-WP_023201628.1;Parent=gene-CCO53_RS07750;Dbxref=GenBank:WP_023201628.1;Name=WP_023201628.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=CCO53_RS07750;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_023201628.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 315722 318448 . + . ID=gene-CCO53_RS07755;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=CCO53_RS07755;old_locus_tag=CCO53_07745 NZ_NPLZ01000003.1 Protein Homology CDS 315722 318448 . + 0 ID=cds-WP_125855788.1;Parent=gene-CCO53_RS07755;Dbxref=GenBank:WP_125855788.1;Name=WP_125855788.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=CCO53_RS07755;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_125855788.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 318445 319422 . + . ID=gene-CCO53_RS07760;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=CCO53_RS07760;old_locus_tag=CCO53_07750 NZ_NPLZ01000003.1 Protein Homology CDS 318445 319422 . + 0 ID=cds-WP_000118515.1;Parent=gene-CCO53_RS07760;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=CCO53_RS07760;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 319437 319979 . + . ID=gene-CCO53_RS07765;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=CCO53_RS07765;old_locus_tag=CCO53_07755 NZ_NPLZ01000003.1 Protein Homology CDS 319437 319979 . + 0 ID=cds-WP_000172747.1;Parent=gene-CCO53_RS07765;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=CCO53_RS07765;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 319990 320544 . + . ID=gene-CCO53_RS07770;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=CCO53_RS07770;old_locus_tag=CCO53_07760 NZ_NPLZ01000003.1 Protein Homology CDS 319990 320544 . + 0 ID=cds-WP_000393522.1;Parent=gene-CCO53_RS07770;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=CCO53_RS07770;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 320541 320843 . + . ID=gene-CCO53_RS07775;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=CCO53_RS07775;old_locus_tag=CCO53_07765 NZ_NPLZ01000003.1 Protein Homology CDS 320541 320843 . + 0 ID=cds-WP_000612687.1;Parent=gene-CCO53_RS07775;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=CCO53_RS07775;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 320840 322681 . + . ID=gene-CCO53_RS07780;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=CCO53_RS07780;old_locus_tag=CCO53_07770 NZ_NPLZ01000003.1 Protein Homology CDS 320840 322681 . + 0 ID=cds-WP_001056579.1;Parent=gene-CCO53_RS07780;Dbxref=GenBank:WP_001056579.1;Name=WP_001056579.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=CCO53_RS07780;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056579.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 322995 324524 . + . ID=gene-CCO53_RS07785;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=CCO53_RS07785;old_locus_tag=CCO53_07775 NZ_NPLZ01000003.1 Protein Homology CDS 322995 324524 . + 0 ID=cds-WP_000926428.1;Parent=gene-CCO53_RS07785;Dbxref=GenBank:WP_000926428.1;Name=WP_000926428.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=CCO53_RS07785;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926428.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 324531 325988 . + . ID=gene-CCO53_RS07790;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=CCO53_RS07790;old_locus_tag=CCO53_07780 NZ_NPLZ01000003.1 Protein Homology CDS 324531 325988 . + 0 ID=cds-WP_058331729.1;Parent=gene-CCO53_RS07790;Dbxref=GenBank:WP_058331729.1;Name=WP_058331729.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=CCO53_RS07790;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_058331729.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 326129 327133 . - . ID=gene-CCO53_RS07795;Name=CCO53_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07795;old_locus_tag=CCO53_07785 NZ_NPLZ01000003.1 Protein Homology CDS 326129 327133 . - 0 ID=cds-WP_058331728.1;Parent=gene-CCO53_RS07795;Dbxref=GenBank:WP_058331728.1;Name=WP_058331728.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131502.1;locus_tag=CCO53_RS07795;product=chemotaxis protein;protein_id=WP_058331728.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 327199 328116 . - . ID=gene-CCO53_RS07800;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=CCO53_RS07800;old_locus_tag=CCO53_07790 NZ_NPLZ01000003.1 Protein Homology CDS 327199 328116 . - 0 ID=cds-WP_000419094.1;Parent=gene-CCO53_RS07800;Dbxref=GenBank:WP_000419094.1;Name=WP_000419094.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=CCO53_RS07800;product=ribonuclease BN;protein_id=WP_000419094.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 328177 328638 . + . ID=gene-CCO53_RS07805;Name=CCO53_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07805;old_locus_tag=CCO53_07795 NZ_NPLZ01000003.1 Protein Homology CDS 328177 328638 . + 0 ID=cds-WP_000568155.1;Parent=gene-CCO53_RS07805;Dbxref=GenBank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=CCO53_RS07805;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 328693 328998 . + . ID=gene-CCO53_RS07810;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=CCO53_RS07810;old_locus_tag=CCO53_07800 NZ_NPLZ01000003.1 Protein Homology CDS 328693 328998 . + 0 ID=cds-WP_001522308.1;Parent=gene-CCO53_RS07810;Dbxref=GenBank:WP_001522308.1;Name=WP_001522308.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=CCO53_RS07810;product=stress response protein ElaB;protein_id=WP_001522308.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 329099 330394 . + . ID=gene-CCO53_RS07815;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=CCO53_RS07815;old_locus_tag=CCO53_07805 NZ_NPLZ01000003.1 Protein Homology CDS 329099 330394 . + 0 ID=cds-WP_000555674.1;Parent=gene-CCO53_RS07815;Dbxref=GenBank:WP_000555674.1;Name=WP_000555674.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=CCO53_RS07815;product=isochorismate synthase MenF;protein_id=WP_000555674.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 330480 332150 . + . ID=gene-CCO53_RS07820;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CCO53_RS07820;old_locus_tag=CCO53_07810 NZ_NPLZ01000003.1 Protein Homology CDS 330480 332150 . + 0 ID=cds-WP_000116395.1;Parent=gene-CCO53_RS07820;Dbxref=GenBank:WP_000116395.1;Name=WP_000116395.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=CCO53_RS07820;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116395.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 332147 332905 . + . ID=gene-CCO53_RS07825;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CCO53_RS07825;old_locus_tag=CCO53_07815 NZ_NPLZ01000003.1 Protein Homology CDS 332147 332905 . + 0 ID=cds-WP_000979135.1;Parent=gene-CCO53_RS07825;Dbxref=GenBank:WP_000979135.1;Name=WP_000979135.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=CCO53_RS07825;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000979135.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 332920 333777 . + . ID=gene-CCO53_RS07830;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CCO53_RS07830;old_locus_tag=CCO53_07820 NZ_NPLZ01000003.1 Protein Homology CDS 332920 333777 . + 0 ID=cds-WP_000640013.1;Parent=gene-CCO53_RS07830;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=CCO53_RS07830;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 333777 334739 . + . ID=gene-CCO53_RS07835;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CCO53_RS07835;old_locus_tag=CCO53_07825 NZ_NPLZ01000003.1 Protein Homology CDS 333777 334739 . + 0 ID=cds-WP_058331727.1;Parent=gene-CCO53_RS07835;Dbxref=GenBank:WP_058331727.1;Name=WP_058331727.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=CCO53_RS07835;product=o-succinylbenzoate synthase;protein_id=WP_058331727.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 334736 336103 . + . ID=gene-CCO53_RS07840;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CCO53_RS07840;old_locus_tag=CCO53_07830 NZ_NPLZ01000003.1 Protein Homology CDS 334736 336103 . + 0 ID=cds-WP_000144658.1;Parent=gene-CCO53_RS07840;Dbxref=GenBank:WP_000144658.1;Name=WP_000144658.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=CCO53_RS07840;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000144658.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 336201 336458 . + . ID=gene-CCO53_RS07845;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=CCO53_RS07845;old_locus_tag=CCO53_07835 NZ_NPLZ01000003.1 Protein Homology CDS 336201 336458 . + 0 ID=cds-WP_000455132.1;Parent=gene-CCO53_RS07845;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=CCO53_RS07845;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 336453 336830 . - . ID=gene-CCO53_RS07850;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=CCO53_RS07850;old_locus_tag=CCO53_07840 NZ_NPLZ01000003.1 Protein Homology CDS 336453 336830 . - 0 ID=cds-WP_000538692.1;Parent=gene-CCO53_RS07850;Dbxref=GenBank:WP_000538692.1;Name=WP_000538692.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=CCO53_RS07850;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538692.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 336830 337165 . - . ID=gene-CCO53_RS07855;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=CCO53_RS07855;old_locus_tag=CCO53_07845 NZ_NPLZ01000003.1 Protein Homology CDS 336830 337165 . - 0 ID=cds-WP_000579482.1;Parent=gene-CCO53_RS07855;Dbxref=GenBank:WP_000579482.1;Name=WP_000579482.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=CCO53_RS07855;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000579482.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 337162 338808 . - . ID=gene-CCO53_RS07860;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=CCO53_RS07860;old_locus_tag=CCO53_07850 NZ_NPLZ01000003.1 Protein Homology CDS 337162 338808 . - 0 ID=cds-WP_000978034.1;Parent=gene-CCO53_RS07860;Dbxref=GenBank:WP_000978034.1;Name=WP_000978034.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=CCO53_RS07860;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000978034.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 338805 339704 . - . ID=gene-CCO53_RS07865;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=CCO53_RS07865;old_locus_tag=CCO53_07855 NZ_NPLZ01000003.1 Protein Homology CDS 338805 339704 . - 0 ID=cds-WP_000169765.1;Parent=gene-CCO53_RS07865;Dbxref=GenBank:WP_000169765.1;Name=WP_000169765.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=CCO53_RS07865;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169765.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 339701 341683 . - . ID=gene-CCO53_RS07870;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=CCO53_RS07870;old_locus_tag=CCO53_07860 NZ_NPLZ01000003.1 Protein Homology CDS 339701 341683 . - 0 ID=cds-WP_058331726.1;Parent=gene-CCO53_RS07870;Dbxref=GenBank:WP_058331726.1;Name=WP_058331726.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=CCO53_RS07870;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_058331726.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 341680 342663 . - . ID=gene-CCO53_RS07875;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=CCO53_RS07875;old_locus_tag=CCO53_07865 NZ_NPLZ01000003.1 Protein Homology CDS 341680 342663 . - 0 ID=cds-WP_000458893.1;Parent=gene-CCO53_RS07875;Dbxref=GenBank:WP_000458893.1;Name=WP_000458893.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=CCO53_RS07875;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458893.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 342666 343805 . - . ID=gene-CCO53_RS07880;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=CCO53_RS07880;old_locus_tag=CCO53_07870 NZ_NPLZ01000003.1 Protein Homology CDS 342666 343805 . - 0 ID=cds-WP_125855789.1;Parent=gene-CCO53_RS07880;Dbxref=GenBank:WP_125855789.1;Name=WP_125855789.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=CCO53_RS07880;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_125855789.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 344104 344709 . + . ID=gene-CCO53_RS07885;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=CCO53_RS07885;old_locus_tag=CCO53_07875 NZ_NPLZ01000003.1 Protein Homology CDS 344104 344709 . + 0 ID=cds-WP_000879258.1;Parent=gene-CCO53_RS07885;Dbxref=GenBank:WP_000879258.1;Name=WP_000879258.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=CCO53_RS07885;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879258.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 344754 345179 . - . ID=gene-CCO53_RS07890;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=CCO53_RS07890;old_locus_tag=CCO53_07880 NZ_NPLZ01000003.1 Protein Homology CDS 344754 345179 . - 0 ID=cds-WP_058331725.1;Parent=gene-CCO53_RS07890;Dbxref=GenBank:WP_058331725.1;Name=WP_058331725.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=CCO53_RS07890;product=nucleoside triphosphatase NudI;protein_id=WP_058331725.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 345458 346000 . + . ID=gene-CCO53_RS07895;Name=CCO53_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07895;old_locus_tag=CCO53_07885 NZ_NPLZ01000003.1 Protein Homology CDS 345458 346000 . + 0 ID=cds-WP_001670658.1;Parent=gene-CCO53_RS07895;Dbxref=GenBank:WP_001670658.1;Name=WP_001670658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=CCO53_RS07895;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 346116 347312 . + . ID=gene-CCO53_RS07900;Name=CCO53_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07900;old_locus_tag=CCO53_07890 NZ_NPLZ01000003.1 Protein Homology CDS 346116 347312 . + 0 ID=cds-WP_000935682.1;Parent=gene-CCO53_RS07900;Dbxref=GenBank:WP_000935682.1;Name=WP_000935682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=CCO53_RS07900;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000935682.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 347410 348432 . - . ID=gene-CCO53_RS07905;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=CCO53_RS07905;old_locus_tag=CCO53_07895 NZ_NPLZ01000003.1 Protein Homology CDS 347410 348432 . - 0 ID=cds-WP_058331723.1;Parent=gene-CCO53_RS07905;Dbxref=GenBank:WP_058331723.1;Name=WP_058331723.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=CCO53_RS07905;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_058331723.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 349005 350195 . - . ID=gene-CCO53_RS07920;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=CCO53_RS07920;old_locus_tag=CCO53_07910 NZ_NPLZ01000003.1 Protein Homology CDS 349005 350195 . - 0 ID=cds-WP_001285726.1;Parent=gene-CCO53_RS07920;Dbxref=GenBank:WP_001285726.1;Name=WP_001285726.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=CCO53_RS07920;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285726.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 350192 351451 . - . ID=gene-CCO53_RS07925;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=CCO53_RS07925;old_locus_tag=CCO53_07915 NZ_NPLZ01000003.1 Protein Homology CDS 350192 351451 . - 0 ID=cds-WP_000667143.1;Parent=gene-CCO53_RS07925;Dbxref=GenBank:WP_000667143.1;Name=WP_000667143.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=CCO53_RS07925;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667143.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 351441 353069 . - . ID=gene-CCO53_RS07930;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=CCO53_RS07930;old_locus_tag=CCO53_07920 NZ_NPLZ01000003.1 Protein Homology CDS 351441 353069 . - 0 ID=cds-WP_058331721.1;Parent=gene-CCO53_RS07930;Dbxref=GenBank:WP_058331721.1;Name=WP_058331721.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=CCO53_RS07930;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_058331721.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 353342 354700 . + . ID=gene-CCO53_RS07935;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CCO53_RS07935;old_locus_tag=CCO53_07925 NZ_NPLZ01000003.1 Protein Homology CDS 353342 354700 . + 0 ID=cds-WP_000948739.1;Parent=gene-CCO53_RS07935;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=CCO53_RS07935;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 354705 355775 . + . ID=gene-CCO53_RS07940;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=CCO53_RS07940;old_locus_tag=CCO53_07930 NZ_NPLZ01000003.1 Protein Homology CDS 354705 355775 . + 0 ID=cds-WP_000858952.1;Parent=gene-CCO53_RS07940;Dbxref=GenBank:WP_000858952.1;Name=WP_000858952.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=CCO53_RS07940;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858952.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 355891 356769 . - . ID=gene-CCO53_RS07945;Name=CCO53_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07945;old_locus_tag=CCO53_07935 NZ_NPLZ01000003.1 Protein Homology CDS 355891 356769 . - 0 ID=cds-WP_058332007.1;Parent=gene-CCO53_RS07945;Dbxref=GenBank:WP_058332007.1;Name=WP_058332007.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=CCO53_RS07945;product=LysR family transcriptional regulator;protein_id=WP_058332007.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 356931 358121 . + . ID=gene-CCO53_RS07950;Name=CCO53_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07950;old_locus_tag=CCO53_07940 NZ_NPLZ01000003.1 Protein Homology CDS 356931 358121 . + 0 ID=cds-WP_000660250.1;Parent=gene-CCO53_RS07950;Dbxref=GenBank:WP_000660250.1;Name=WP_000660250.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=CCO53_RS07950;product=MFS transporter;protein_id=WP_000660250.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 358123 358377 . - . ID=gene-CCO53_RS07955;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=CCO53_RS07955;old_locus_tag=CCO53_07945 NZ_NPLZ01000003.1 Protein Homology CDS 358123 358377 . - 0 ID=cds-WP_000533921.1;Parent=gene-CCO53_RS07955;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=CCO53_RS07955;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 358377 359507 . - . ID=gene-CCO53_RS07960;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=CCO53_RS07960;old_locus_tag=CCO53_07950 NZ_NPLZ01000003.1 Protein Homology CDS 358377 359507 . - 0 ID=cds-WP_000332026.1;Parent=gene-CCO53_RS07960;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=CCO53_RS07960;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 359620 361905 . - . ID=gene-CCO53_RS07965;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=CCO53_RS07965;old_locus_tag=CCO53_07955 NZ_NPLZ01000003.1 Protein Homology CDS 359620 361905 . - 0 ID=cds-WP_001076494.1;Parent=gene-CCO53_RS07965;Dbxref=GenBank:WP_001076494.1;Name=WP_001076494.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=CCO53_RS07965;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076494.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 362261 362989 . - . ID=gene-CCO53_RS07970;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=CCO53_RS07970;old_locus_tag=CCO53_07960 NZ_NPLZ01000003.1 Protein Homology CDS 362261 362989 . - 0 ID=cds-WP_001091009.1;Parent=gene-CCO53_RS07970;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=CCO53_RS07970;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 363072 363956 . - . ID=gene-CCO53_RS07975;Name=CCO53_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07975;old_locus_tag=CCO53_07965 NZ_NPLZ01000003.1 Protein Homology CDS 363072 363956 . - 0 ID=cds-WP_000944714.1;Parent=gene-CCO53_RS07975;Dbxref=GenBank:WP_000944714.1;Name=WP_000944714.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=CCO53_RS07975;product=GntR family transcriptional regulator;protein_id=WP_000944714.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 364006 365331 . + . ID=gene-CCO53_RS07980;Name=CCO53_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07980;old_locus_tag=CCO53_07970 NZ_NPLZ01000003.1 Protein Homology CDS 364006 365331 . + 0 ID=cds-WP_000098078.1;Parent=gene-CCO53_RS07980;Dbxref=GenBank:WP_000098078.1;Name=WP_000098078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=CCO53_RS07980;product=MFS transporter;protein_id=WP_000098078.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 365346 366548 . + . ID=gene-CCO53_RS07985;Name=CCO53_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS07985;old_locus_tag=CCO53_07975 NZ_NPLZ01000003.1 Protein Homology CDS 365346 366548 . + 0 ID=cds-WP_094887622.1;Parent=gene-CCO53_RS07985;Dbxref=GenBank:WP_094887622.1;Name=WP_094887622.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=CCO53_RS07985;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_094887622.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 366958 369594 . + . ID=gene-CCO53_RS07995;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CCO53_RS07995;old_locus_tag=CCO53_07985 NZ_NPLZ01000003.1 Protein Homology CDS 366958 369594 . + 0 ID=cds-WP_001281271.1;Parent=gene-CCO53_RS07995;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=CCO53_RS07995;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 369712 372558 . + . ID=gene-CCO53_RS08000;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=CCO53_RS08000;old_locus_tag=CCO53_07990 NZ_NPLZ01000003.1 Protein Homology CDS 369712 372558 . + 0 ID=cds-WP_000876084.1;Parent=gene-CCO53_RS08000;Dbxref=GenBank:WP_000876084.1;Name=WP_000876084.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=CCO53_RS08000;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876084.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 372661 373311 . - . ID=gene-CCO53_RS08005;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=CCO53_RS08005;old_locus_tag=CCO53_07995 NZ_NPLZ01000003.1 Protein Homology CDS 372661 373311 . - 0 ID=cds-WP_001061919.1;Parent=gene-CCO53_RS08005;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=CCO53_RS08005;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 373328 375997 . - . ID=gene-CCO53_RS08010;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=CCO53_RS08010;old_locus_tag=CCO53_08000 NZ_NPLZ01000003.1 Protein Homology CDS 373328 375997 . - 0 ID=cds-WP_000083203.1;Parent=gene-CCO53_RS08010;Dbxref=GenBank:WP_000083203.1;Name=WP_000083203.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=CCO53_RS08010;product=phosphotransferase RcsD;protein_id=WP_000083203.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 376726 377862 . + . ID=gene-CCO53_RS08020;Name=CCO53_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08020;old_locus_tag=CCO53_08010 NZ_NPLZ01000003.1 Protein Homology CDS 376726 377862 . + 0 ID=cds-WP_000865526.1;Parent=gene-CCO53_RS08020;Dbxref=GenBank:WP_000865526.1;Name=WP_000865526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=CCO53_RS08020;product=porin OmpC;protein_id=WP_000865526.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 377977 379029 . + . ID=gene-CCO53_RS08025;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=CCO53_RS08025;old_locus_tag=CCO53_08015 NZ_NPLZ01000003.1 Protein Homology CDS 377977 379029 . + 0 ID=cds-WP_000784301.1;Parent=gene-CCO53_RS08025;Dbxref=GenBank:WP_000784301.1;Name=WP_000784301.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=CCO53_RS08025;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784301.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 379110 380171 . + . ID=gene-CCO53_RS08030;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=CCO53_RS08030;old_locus_tag=CCO53_08020 NZ_NPLZ01000003.1 Protein Homology CDS 379110 380171 . + 0 ID=cds-WP_000975984.1;Parent=gene-CCO53_RS08030;Dbxref=GenBank:WP_000975984.1;Name=WP_000975984.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=CCO53_RS08030;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975984.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 380174 380824 . + . ID=gene-CCO53_RS08035;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=CCO53_RS08035;old_locus_tag=CCO53_08025 NZ_NPLZ01000003.1 Protein Homology CDS 380174 380824 . + 0 ID=cds-WP_094887623.1;Parent=gene-CCO53_RS08035;Dbxref=GenBank:WP_094887623.1;Name=WP_094887623.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=CCO53_RS08035;product=DNA oxidative demethylase AlkB;protein_id=WP_094887623.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 380900 382543 . + . ID=gene-CCO53_RS08040;Name=CCO53_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08040;old_locus_tag=CCO53_08030 NZ_NPLZ01000003.1 Protein Homology CDS 380900 382543 . + 0 ID=cds-WP_000421584.1;Parent=gene-CCO53_RS08040;Dbxref=GenBank:WP_000421584.1;Name=WP_000421584.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=CCO53_RS08040;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_000421584.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 382735 383229 . - . ID=gene-CCO53_RS08045;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=CCO53_RS08045;old_locus_tag=CCO53_08035 NZ_NPLZ01000003.1 Protein Homology CDS 382735 383229 . - 0 ID=cds-WP_001550295.1;Parent=gene-CCO53_RS08045;Dbxref=GenBank:WP_001550295.1;Name=WP_001550295.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=CCO53_RS08045;product=serine protease inhibitor ecotin;protein_id=WP_001550295.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 383643 384134 . + . ID=gene-CCO53_RS08050;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=CCO53_RS08050;old_locus_tag=CCO53_08040 NZ_NPLZ01000003.1 Protein Homology CDS 383643 384134 . + 0 ID=cds-WP_000228064.1;Parent=gene-CCO53_RS08050;Dbxref=GenBank:WP_000228064.1;Name=WP_000228064.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=CCO53_RS08050;product=ferredoxin-type protein NapF;protein_id=WP_000228064.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 384124 384387 . + . ID=gene-CCO53_RS08055;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=CCO53_RS08055;old_locus_tag=CCO53_08045 NZ_NPLZ01000003.1 Protein Homology CDS 384124 384387 . + 0 ID=cds-WP_001260058.1;Parent=gene-CCO53_RS08055;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=CCO53_RS08055;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 384384 386870 . + . ID=gene-CCO53_RS08060;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=CCO53_RS08060;old_locus_tag=CCO53_08050 NZ_NPLZ01000003.1 Protein Homology CDS 384384 386870 . + 0 ID=cds-WP_058332011.1;Parent=gene-CCO53_RS08060;Dbxref=GenBank:WP_058332011.1;Name=WP_058332011.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=CCO53_RS08060;product=nitrate reductase catalytic subunit NapA;protein_id=WP_058332011.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 386877 387572 . + . ID=gene-CCO53_RS08065;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=CCO53_RS08065;old_locus_tag=CCO53_08055 NZ_NPLZ01000003.1 Protein Homology CDS 386877 387572 . + 0 ID=cds-WP_000091673.1;Parent=gene-CCO53_RS08065;Dbxref=GenBank:WP_000091673.1;Name=WP_000091673.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=CCO53_RS08065;product=ferredoxin-type protein NapG;protein_id=WP_000091673.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 387559 388428 . + . ID=gene-CCO53_RS08070;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=CCO53_RS08070;old_locus_tag=CCO53_08060 NZ_NPLZ01000003.1 Protein Homology CDS 387559 388428 . + 0 ID=cds-WP_000013528.1;Parent=gene-CCO53_RS08070;Dbxref=GenBank:WP_000013528.1;Name=WP_000013528.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=CCO53_RS08070;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013528.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 388544 388993 . + . ID=gene-CCO53_RS08075;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=CCO53_RS08075;old_locus_tag=CCO53_08065 NZ_NPLZ01000003.1 Protein Homology CDS 388544 388993 . + 0 ID=cds-WP_000835182.1;Parent=gene-CCO53_RS08075;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=CCO53_RS08075;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 389003 389605 . + . ID=gene-CCO53_RS08080;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=CCO53_RS08080;old_locus_tag=CCO53_08070 NZ_NPLZ01000003.1 Protein Homology CDS 389003 389605 . + 0 ID=cds-WP_000431778.1;Parent=gene-CCO53_RS08080;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=CCO53_RS08080;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11 NZ_NPLZ01000003.1 RefSeq gene 389626 389752 . + . ID=gene-CCO53_RS08085;Name=CCO53_RS08085;end_range=389752,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08085;old_locus_tag=CCO53_08075;partial=true NZ_NPLZ01000003.1 Protein Homology CDS 389626 389752 . + 0 ID=cds-WP_116781764.1-2;Parent=gene-CCO53_RS08085;Dbxref=GenBank:WP_116781764.1;Name=WP_116781764.1;Ontology_term=GO:0005524;end_range=389752,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO53_RS08085;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_116781764.1;transl_table=11 ##sequence-region NZ_NPLZ01000030.1 1 1824 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000030.1 RefSeq region 1 1824 . + . ID=NZ_NPLZ01000030.1:1..1824;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000030.1 RefSeq gene 1 758 . + . ID=gene-CCO53_RS24220;Name=CCO53_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24220;partial=true;start_range=.,1 NZ_NPLZ01000030.1 Protein Homology CDS 1 758 . + 2 ID=cds-WP_272897681.1;Parent=gene-CCO53_RS24220;Dbxref=GenBank:WP_272897681.1;Name=WP_272897681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542648.1;locus_tag=CCO53_RS24220;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_272897681.1;start_range=.,1;transl_table=11 NZ_NPLZ01000030.1 RefSeq gene 773 1396 . + . ID=gene-CCO53_RS23465;Name=CCO53_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23465;old_locus_tag=CCO53_23415 NZ_NPLZ01000030.1 Protein Homology CDS 773 1396 . + 0 ID=cds-WP_058331204.1;Parent=gene-CCO53_RS23465;Dbxref=GenBank:WP_058331204.1;Name=WP_058331204.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042775.4;locus_tag=CCO53_RS23465;product=DUF6707 family protein;protein_id=WP_058331204.1;transl_table=11 NZ_NPLZ01000030.1 RefSeq gene 1507 1785 . - . ID=gene-CCO53_RS24170;Name=CCO53_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24170;old_locus_tag=CCO53_23420 NZ_NPLZ01000030.1 Protein Homology CDS 1507 1785 . - 0 ID=cds-WP_237141201.1;Parent=gene-CCO53_RS24170;Dbxref=GenBank:WP_237141201.1;Name=WP_237141201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=CCO53_RS24170;product=hypothetical protein;protein_id=WP_237141201.1;transl_table=11 ##sequence-region NZ_NPLZ01000031.1 1 1457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000031.1 RefSeq region 1 1457 . + . ID=NZ_NPLZ01000031.1:1..1457;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000031.1 RefSeq gene 1 1447 . + . ID=gene-CCO53_RS23480;Name=CCO53_RS23480;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS23480;old_locus_tag=CCO53_23430;partial=true;start_range=.,1 NZ_NPLZ01000031.1 cmsearch rRNA 1 1447 . + . ID=rna-CCO53_RS23480;Parent=gene-CCO53_RS23480;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23480;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPLZ01000031.1 cmsearch exon 1 1447 . + . ID=exon-CCO53_RS23480-1;Parent=rna-CCO53_RS23480;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23480;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPLZ01000032.1 1 1448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000032.1 RefSeq region 1 1448 . + . ID=NZ_NPLZ01000032.1:1..1448;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000032.1 RefSeq gene 61 1374 . - . ID=gene-CCO53_RS23485;Name=CCO53_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23485;old_locus_tag=CCO53_23435 NZ_NPLZ01000032.1 Protein Homology CDS 61 1374 . - 0 ID=cds-WP_024146079.1;Parent=gene-CCO53_RS23485;Dbxref=GenBank:WP_024146079.1;Name=WP_024146079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196353.1;locus_tag=CCO53_RS23485;product=ISNCY family transposase;protein_id=WP_024146079.1;transl_table=11 ##sequence-region NZ_NPLZ01000033.1 1 1292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000033.1 RefSeq region 1 1292 . + . ID=NZ_NPLZ01000033.1:1..1292;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000033.1 RefSeq gene 146 1282 . + . ID=gene-CCO53_RS23490;Name=CCO53_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23490;old_locus_tag=CCO53_23440 NZ_NPLZ01000033.1 Protein Homology CDS 146 1282 . + 0 ID=cds-WP_058331205.1;Parent=gene-CCO53_RS23490;Dbxref=GenBank:WP_058331205.1;Name=WP_058331205.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=CCO53_RS23490;product=ISAs1 family transposase;protein_id=WP_058331205.1;transl_table=11 ##sequence-region NZ_NPLZ01000034.1 1 957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000034.1 RefSeq region 1 957 . + . ID=NZ_NPLZ01000034.1:1..957;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000034.1 RefSeq gene 1 957 . - . ID=gene-CCO53_RS23495;Name=CCO53_RS23495;end_range=957,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS23495;old_locus_tag=CCO53_23445;partial=true;start_range=.,1 NZ_NPLZ01000034.1 cmsearch rRNA 1 957 . - . ID=rna-CCO53_RS23495;Parent=gene-CCO53_RS23495;Dbxref=RFAM:RF02541;end_range=957,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23495;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPLZ01000034.1 cmsearch exon 1 957 . - . ID=exon-CCO53_RS23495-1;Parent=rna-CCO53_RS23495;Dbxref=RFAM:RF02541;end_range=957,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23495;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPLZ01000035.1 1 897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000035.1 RefSeq region 1 897 . + . ID=NZ_NPLZ01000035.1:1..897;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000035.1 RefSeq gene 1 117 . + . ID=gene-CCO53_RS23500;Name=CCO53_RS23500;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS23500;old_locus_tag=CCO53_23450;partial=true;start_range=.,1 NZ_NPLZ01000035.1 cmsearch rRNA 1 117 . + . ID=rna-CCO53_RS23500;Parent=gene-CCO53_RS23500;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23500;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPLZ01000035.1 cmsearch exon 1 117 . + . ID=exon-CCO53_RS23500-1;Parent=rna-CCO53_RS23500;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23500;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPLZ01000035.1 RefSeq gene 187 263 . + . ID=gene-CCO53_RS23505;Name=CCO53_RS23505;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS23505;old_locus_tag=CCO53_23455 NZ_NPLZ01000035.1 tRNAscan-SE tRNA 187 263 . + . ID=rna-CCO53_RS23505;Parent=gene-CCO53_RS23505;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23505;product=tRNA-Ile NZ_NPLZ01000035.1 tRNAscan-SE exon 187 263 . + . ID=exon-CCO53_RS23505-1;Parent=rna-CCO53_RS23505;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23505;product=tRNA-Ile NZ_NPLZ01000035.1 RefSeq gene 375 450 . + . ID=gene-CCO53_RS23510;Name=CCO53_RS23510;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS23510;old_locus_tag=CCO53_23460 NZ_NPLZ01000035.1 tRNAscan-SE tRNA 375 450 . + . ID=rna-CCO53_RS23510;Parent=gene-CCO53_RS23510;anticodon=(pos:408..410);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23510;product=tRNA-Ala NZ_NPLZ01000035.1 tRNAscan-SE exon 375 450 . + . ID=exon-CCO53_RS23510-1;Parent=rna-CCO53_RS23510;anticodon=(pos:408..410);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23510;product=tRNA-Ala NZ_NPLZ01000035.1 RefSeq gene 633 897 . + . ID=gene-CCO53_RS23515;Name=CCO53_RS23515;end_range=897,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS23515;old_locus_tag=CCO53_23465;partial=true NZ_NPLZ01000035.1 cmsearch rRNA 633 897 . + . ID=rna-CCO53_RS23515;Parent=gene-CCO53_RS23515;Dbxref=RFAM:RF02541;end_range=897,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23515;partial=true;product=23S ribosomal RNA NZ_NPLZ01000035.1 cmsearch exon 633 897 . + . ID=exon-CCO53_RS23515-1;Parent=rna-CCO53_RS23515;Dbxref=RFAM:RF02541;end_range=897,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23515;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPLZ01000036.1 1 860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000036.1 RefSeq region 1 860 . + . ID=NZ_NPLZ01000036.1:1..860;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000036.1 RefSeq gene 1 860 . + . ID=gene-CCO53_RS23520;Name=tuf;end_range=860,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CCO53_RS23520;old_locus_tag=CCO53_23470;partial=true;start_range=.,1 NZ_NPLZ01000036.1 Protein Homology CDS 1 860 . + 0 ID=cds-WP_031608269.1;Parent=gene-CCO53_RS23520;Dbxref=GenBank:WP_031608269.1;Name=WP_031608269.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=860,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=CCO53_RS23520;partial=true;product=elongation factor Tu;protein_id=WP_031608269.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPLZ01000037.1 1 775 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000037.1 RefSeq region 1 775 . + . ID=NZ_NPLZ01000037.1:1..775;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000037.1 RefSeq gene 1 265 . - . ID=gene-CCO53_RS23525;Name=CCO53_RS23525;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS23525;old_locus_tag=CCO53_23475;partial=true;start_range=.,1 NZ_NPLZ01000037.1 cmsearch rRNA 1 265 . - . ID=rna-CCO53_RS23525;Parent=gene-CCO53_RS23525;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23525;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPLZ01000037.1 cmsearch exon 1 265 . - . ID=exon-CCO53_RS23525-1;Parent=rna-CCO53_RS23525;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23525;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPLZ01000037.1 RefSeq gene 498 573 . - . ID=gene-CCO53_RS23530;Name=CCO53_RS23530;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS23530;old_locus_tag=CCO53_23480 NZ_NPLZ01000037.1 tRNAscan-SE tRNA 498 573 . - . ID=rna-CCO53_RS23530;Parent=gene-CCO53_RS23530;anticodon=(pos:complement(537..539));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23530;product=tRNA-Glu NZ_NPLZ01000037.1 tRNAscan-SE exon 498 573 . - . ID=exon-CCO53_RS23530-1;Parent=rna-CCO53_RS23530;anticodon=(pos:complement(537..539));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23530;product=tRNA-Glu NZ_NPLZ01000037.1 RefSeq gene 659 775 . - . ID=gene-CCO53_RS23535;Name=CCO53_RS23535;end_range=775,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS23535;old_locus_tag=CCO53_23485;partial=true NZ_NPLZ01000037.1 cmsearch rRNA 659 775 . - . ID=rna-CCO53_RS23535;Parent=gene-CCO53_RS23535;Dbxref=RFAM:RF00177;end_range=775,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23535;partial=true;product=16S ribosomal RNA NZ_NPLZ01000037.1 cmsearch exon 659 775 . - . ID=exon-CCO53_RS23535-1;Parent=rna-CCO53_RS23535;Dbxref=RFAM:RF00177;end_range=775,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23535;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPLZ01000038.1 1 747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000038.1 RefSeq region 1 747 . + . ID=NZ_NPLZ01000038.1:1..747;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000038.1 RefSeq gene 55 747 . - . ID=gene-CCO53_RS23540;Name=CCO53_RS23540;end_range=747,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS23540;old_locus_tag=CCO53_23490;partial=true NZ_NPLZ01000038.1 cmsearch rRNA 55 747 . - . ID=rna-CCO53_RS23540;Parent=gene-CCO53_RS23540;Dbxref=RFAM:RF02541;end_range=747,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23540;partial=true;product=23S ribosomal RNA NZ_NPLZ01000038.1 cmsearch exon 55 747 . - . ID=exon-CCO53_RS23540-1;Parent=rna-CCO53_RS23540;Dbxref=RFAM:RF02541;end_range=747,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23540;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPLZ01000039.1 1 608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000039.1 RefSeq region 1 608 . + . ID=NZ_NPLZ01000039.1:1..608;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000039.1 RefSeq gene 1 608 . + . ID=gene-CCO53_RS23545;Name=CCO53_RS23545;end_range=608,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23545;old_locus_tag=CCO53_23495;partial=true;start_range=.,1 NZ_NPLZ01000039.1 Protein Homology CDS 1 608 . + 0 ID=cds-WP_176456368.1;Parent=gene-CCO53_RS23545;Dbxref=GenBank:WP_176456368.1;Name=WP_176456368.1;Ontology_term=GO:0030246;end_range=608,.;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402129.1;locus_tag=CCO53_RS23545;partial=true;product=RHS repeat domain-containing protein;protein_id=WP_176456368.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPLZ01000004.1 1 377819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000004.1 RefSeq region 1 377819 . + . ID=NZ_NPLZ01000004.1:1..377819;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000004.1 RefSeq gene 180 1307 . - . ID=gene-CCO53_RS08090;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=CCO53_RS08090;old_locus_tag=CCO53_08080 NZ_NPLZ01000004.1 Protein Homology CDS 180 1307 . - 0 ID=cds-WP_001109124.1;Parent=gene-CCO53_RS08090;Dbxref=GenBank:WP_001109124.1;Name=WP_001109124.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=CCO53_RS08090;product=ribonuclease D;protein_id=WP_001109124.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 1380 3065 . - . ID=gene-CCO53_RS08095;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CCO53_RS08095;old_locus_tag=CCO53_08085 NZ_NPLZ01000004.1 Protein Homology CDS 1380 3065 . - 0 ID=cds-WP_000758418.1;Parent=gene-CCO53_RS08095;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=CCO53_RS08095;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 3270 3851 . - . ID=gene-CCO53_RS08105;Name=CCO53_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08105;old_locus_tag=CCO53_08095 NZ_NPLZ01000004.1 Protein Homology CDS 3270 3851 . - 0 ID=cds-WP_000290594.1;Parent=gene-CCO53_RS08105;Dbxref=GenBank:WP_000290594.1;Name=WP_000290594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=CCO53_RS08105;product=Slp family lipoprotein;protein_id=WP_000290594.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 3923 4618 . - . ID=gene-CCO53_RS08110;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CCO53_RS08110;old_locus_tag=CCO53_08100 NZ_NPLZ01000004.1 Protein Homology CDS 3923 4618 . - 0 ID=cds-WP_001221014.1;Parent=gene-CCO53_RS08110;Dbxref=GenBank:WP_001221014.1;Name=WP_001221014.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=CCO53_RS08110;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221014.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 4676 6586 . - . ID=gene-CCO53_RS08115;Name=CCO53_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08115;old_locus_tag=CCO53_08105 NZ_NPLZ01000004.1 Protein Homology CDS 4676 6586 . - 0 ID=cds-WP_000128801.1;Parent=gene-CCO53_RS08115;Dbxref=GenBank:WP_000128801.1;Name=WP_000128801.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=CCO53_RS08115;product=ATP-dependent DNA helicase;protein_id=WP_000128801.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 6717 7061 . + . ID=gene-CCO53_RS08120;Name=CCO53_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08120;old_locus_tag=CCO53_08110 NZ_NPLZ01000004.1 Protein Homology CDS 6717 7061 . + 0 ID=cds-WP_000029550.1;Parent=gene-CCO53_RS08120;Dbxref=GenBank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=CCO53_RS08120;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 7067 7246 . - . ID=gene-CCO53_RS08125;Name=CCO53_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08125;old_locus_tag=CCO53_08115 NZ_NPLZ01000004.1 Protein Homology CDS 7067 7246 . - 0 ID=cds-WP_000457328.1;Parent=gene-CCO53_RS08125;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=CCO53_RS08125;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 7327 8691 . + . ID=gene-CCO53_RS08130;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=CCO53_RS08130;old_locus_tag=CCO53_08120 NZ_NPLZ01000004.1 Protein Homology CDS 7327 8691 . + 0 ID=cds-WP_072275460.1;Parent=gene-CCO53_RS08130;Dbxref=GenBank:WP_072275460.1;Name=WP_072275460.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=CCO53_RS08130;product=aminodeoxychorismate synthase component 1;protein_id=WP_072275460.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 8695 9273 . + . ID=gene-CCO53_RS08135;Name=CCO53_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08135;old_locus_tag=CCO53_08125 NZ_NPLZ01000004.1 Protein Homology CDS 8695 9273 . + 0 ID=cds-WP_000381544.1;Parent=gene-CCO53_RS08135;Dbxref=GenBank:WP_000381544.1;Name=WP_000381544.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=CCO53_RS08135;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 9537 10901 . + . ID=gene-CCO53_RS08140;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=CCO53_RS08140;old_locus_tag=CCO53_08130 NZ_NPLZ01000004.1 Protein Homology CDS 9537 10901 . + 0 ID=cds-WP_094887625.1;Parent=gene-CCO53_RS08140;Dbxref=GenBank:WP_094887625.1;Name=WP_094887625.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=CCO53_RS08140;product=L-serine ammonia-lyase;protein_id=WP_094887625.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 11039 12640 . + . ID=gene-CCO53_RS08145;Name=CCO53_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08145;old_locus_tag=CCO53_08135 NZ_NPLZ01000004.1 Protein Homology CDS 11039 12640 . + 0 ID=cds-WP_094887626.1;Parent=gene-CCO53_RS08145;Dbxref=GenBank:WP_094887626.1;Name=WP_094887626.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=CCO53_RS08145;product=EAL domain-containing protein;protein_id=WP_094887626.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 12662 14221 . - . ID=gene-CCO53_RS08150;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=CCO53_RS08150;old_locus_tag=CCO53_08140 NZ_NPLZ01000004.1 Protein Homology CDS 12662 14221 . - 0 ID=cds-WP_000421815.1;Parent=gene-CCO53_RS08150;Dbxref=GenBank:WP_000421815.1;Name=WP_000421815.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=CCO53_RS08150;product=CNNM family cation transport protein YoaE;protein_id=WP_000421815.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 14209 14541 . - . ID=gene-CCO53_RS24355;Name=CCO53_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24355;old_locus_tag=CCO53_08145 NZ_NPLZ01000004.1 Protein Homology CDS 14209 14541 . - 0 ID=cds-WP_371065704.1;Parent=gene-CCO53_RS24355;Dbxref=GenBank:WP_371065704.1;Name=WP_371065704.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=CCO53_RS24355;product=protein YoaL;protein_id=WP_371065704.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 14694 15662 . + . ID=gene-CCO53_RS08160;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=CCO53_RS08160;old_locus_tag=CCO53_08150 NZ_NPLZ01000004.1 Protein Homology CDS 14694 15662 . + 0 ID=cds-WP_000150523.1;Parent=gene-CCO53_RS08160;Dbxref=GenBank:WP_000150523.1;Name=WP_000150523.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=CCO53_RS08160;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150523.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 15715 16515 . + . ID=gene-CCO53_RS08165;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=CCO53_RS08165;old_locus_tag=CCO53_08155 NZ_NPLZ01000004.1 Protein Homology CDS 15715 16515 . + 0 ID=cds-WP_000406918.1;Parent=gene-CCO53_RS08165;Dbxref=GenBank:WP_000406918.1;Name=WP_000406918.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=CCO53_RS08165;product=PTS mannose transporter subunit IIC;protein_id=WP_000406918.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 16528 17379 . + . ID=gene-CCO53_RS08170;Name=CCO53_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08170;old_locus_tag=CCO53_08160 NZ_NPLZ01000004.1 Protein Homology CDS 16528 17379 . + 0 ID=cds-WP_001518647.1;Parent=gene-CCO53_RS08170;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=CCO53_RS08170;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 17438 17896 . + . ID=gene-CCO53_RS08175;Name=CCO53_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08175;old_locus_tag=CCO53_08165 NZ_NPLZ01000004.1 Protein Homology CDS 17438 17896 . + 0 ID=cds-WP_000156280.1;Parent=gene-CCO53_RS08175;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=CCO53_RS08175;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11 NZ_NPLZ01000004.1 cmsearch riboswitch 18093 18194 . + . ID=id-NZ_NPLZ01000004.1:18093..18194;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPLZ01000004.1 RefSeq gene 18306 18872 . + . ID=gene-CCO53_RS08185;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=CCO53_RS08185;old_locus_tag=CCO53_08175 NZ_NPLZ01000004.1 Protein Homology CDS 18306 18872 . + 0 ID=cds-WP_001518359.1;Parent=gene-CCO53_RS08185;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=CCO53_RS08185;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 18869 19678 . - . ID=gene-CCO53_RS08190;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=CCO53_RS08190;old_locus_tag=CCO53_08180 NZ_NPLZ01000004.1 Protein Homology CDS 18869 19678 . - 0 ID=cds-WP_000010931.1;Parent=gene-CCO53_RS08190;Dbxref=GenBank:WP_000010931.1;Name=WP_000010931.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=CCO53_RS08190;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010931.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 19744 21489 . - . ID=gene-CCO53_RS08195;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO53_RS08195;old_locus_tag=CCO53_08185 NZ_NPLZ01000004.1 Protein Homology CDS 19744 21489 . - 0 ID=cds-WP_058331772.1;Parent=gene-CCO53_RS08195;Dbxref=GenBank:WP_058331772.1;Name=WP_058331772.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=CCO53_RS08195;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_058331772.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 21709 21918 . - . ID=gene-CCO53_RS08200;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO53_RS08200;old_locus_tag=CCO53_08190 NZ_NPLZ01000004.1 Protein Homology CDS 21709 21918 . - 0 ID=cds-WP_001062678.1;Parent=gene-CCO53_RS08200;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=CCO53_RS08200;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 21931 22074 . - . ID=gene-CCO53_RS08205;Name=CCO53_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08205;old_locus_tag=CCO53_08195 NZ_NPLZ01000004.1 Protein Homology CDS 21931 22074 . - 0 ID=cds-WP_001537930.1;Parent=gene-CCO53_RS08205;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=CCO53_RS08205;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 22723 23010 . - . ID=gene-CCO53_RS08210;Name=CCO53_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08210;old_locus_tag=CCO53_08200 NZ_NPLZ01000004.1 Protein Homology CDS 22723 23010 . - 0 ID=cds-WP_001000660.1;Parent=gene-CCO53_RS08210;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=CCO53_RS08210;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 23081 23224 . - . ID=gene-CCO53_RS08215;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=CCO53_RS08215;old_locus_tag=CCO53_08205 NZ_NPLZ01000004.1 Protein Homology CDS 23081 23224 . - 0 ID=cds-WP_000714547.1;Parent=gene-CCO53_RS08215;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=CCO53_RS08215;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 23382 23621 . + . ID=gene-CCO53_RS08220;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=CCO53_RS08220;old_locus_tag=CCO53_08210 NZ_NPLZ01000004.1 Protein Homology CDS 23382 23621 . + 0 ID=cds-WP_080160451.1;Parent=gene-CCO53_RS08220;Dbxref=GenBank:WP_080160451.1;Name=WP_080160451.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=CCO53_RS08220;product=invasion protein YobH;protein_id=WP_080160451.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 23833 24624 . - . ID=gene-CCO53_RS08225;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=CCO53_RS08225;old_locus_tag=CCO53_08215 NZ_NPLZ01000004.1 Protein Homology CDS 23833 24624 . - 0 ID=cds-WP_001262195.1;Parent=gene-CCO53_RS08225;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=CCO53_RS08225;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 24800 26173 . + . ID=gene-CCO53_RS08230;Name=CCO53_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08230;old_locus_tag=CCO53_08220 NZ_NPLZ01000004.1 Protein Homology CDS 24800 26173 . + 0 ID=cds-WP_000416139.1;Parent=gene-CCO53_RS08230;Dbxref=GenBank:WP_000416139.1;Name=WP_000416139.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=CCO53_RS08230;product=MFS transporter;protein_id=WP_000416139.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 26221 27102 . - . ID=gene-CCO53_RS08235;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=CCO53_RS08235;old_locus_tag=CCO53_08225 NZ_NPLZ01000004.1 Protein Homology CDS 26221 27102 . - 0 ID=cds-WP_000984498.1;Parent=gene-CCO53_RS08235;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=CCO53_RS08235;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 27296 29344 . - . ID=gene-CCO53_RS08240;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=CCO53_RS08240;old_locus_tag=CCO53_08230 NZ_NPLZ01000004.1 Protein Homology CDS 27296 29344 . - 0 ID=cds-WP_023201425.1;Parent=gene-CCO53_RS08240;Dbxref=GenBank:WP_023201425.1;Name=WP_023201425.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=CCO53_RS08240;product=carboxy terminal-processing peptidase;protein_id=WP_023201425.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 29364 30050 . - . ID=gene-CCO53_RS08245;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=CCO53_RS08245;old_locus_tag=CCO53_08235 NZ_NPLZ01000004.1 Protein Homology CDS 29364 30050 . - 0 ID=cds-WP_000431401.1;Parent=gene-CCO53_RS08245;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=CCO53_RS08245;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 30148 30645 . - . ID=gene-CCO53_RS08250;Name=CCO53_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08250;old_locus_tag=CCO53_08240 NZ_NPLZ01000004.1 Protein Homology CDS 30148 30645 . - 0 ID=cds-WP_001518229.1;Parent=gene-CCO53_RS08250;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=CCO53_RS08250;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 30774 32057 . + . ID=gene-CCO53_RS08255;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=CCO53_RS08255;old_locus_tag=CCO53_08245 NZ_NPLZ01000004.1 Protein Homology CDS 30774 32057 . + 0 ID=cds-WP_001207293.1;Parent=gene-CCO53_RS08255;Dbxref=GenBank:WP_001207293.1;Name=WP_001207293.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=CCO53_RS08255;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207293.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 32026 34659 . + . ID=gene-CCO53_RS08260;Name=CCO53_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08260;old_locus_tag=CCO53_08250 NZ_NPLZ01000004.1 Protein Homology CDS 32026 34659 . + 0 ID=cds-WP_001521100.1;Parent=gene-CCO53_RS08260;Dbxref=GenBank:WP_001521100.1;Name=WP_001521100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=CCO53_RS08260;product=PqiB family protein;protein_id=WP_001521100.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 34737 36176 . + . ID=gene-CCO53_RS08265;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=CCO53_RS08265;old_locus_tag=CCO53_08255 NZ_NPLZ01000004.1 Protein Homology CDS 34737 36176 . + 0 ID=cds-WP_094887657.1;Parent=gene-CCO53_RS08265;Dbxref=GenBank:WP_094887657.1;Name=WP_094887657.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=CCO53_RS08265;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_094887657.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 36294 36530 . + . ID=gene-CCO53_RS08270;Name=CCO53_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08270;old_locus_tag=CCO53_08260 NZ_NPLZ01000004.1 Protein Homology CDS 36294 36530 . + 0 ID=cds-WP_024131108.1;Parent=gene-CCO53_RS08270;Dbxref=GenBank:WP_024131108.1;Name=WP_024131108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=CCO53_RS08270;product=YebV family protein;protein_id=WP_024131108.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 36641 36832 . + . ID=gene-CCO53_RS08275;Name=CCO53_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08275;old_locus_tag=CCO53_08265 NZ_NPLZ01000004.1 Protein Homology CDS 36641 36832 . + 0 ID=cds-WP_000457838.1;Parent=gene-CCO53_RS08275;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=CCO53_RS08275;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 36851 37501 . - . ID=gene-CCO53_RS08280;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=CCO53_RS08280;old_locus_tag=CCO53_08270 NZ_NPLZ01000004.1 Protein Homology CDS 36851 37501 . - 0 ID=cds-WP_000986176.1;Parent=gene-CCO53_RS08280;Dbxref=GenBank:WP_000986176.1;Name=WP_000986176.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=CCO53_RS08280;product=protein-serine/threonine phosphatase;protein_id=WP_000986176.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 37724 37888 . - . ID=gene-CCO53_RS08285;Name=CCO53_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08285;old_locus_tag=CCO53_08275 NZ_NPLZ01000004.1 Protein Homology CDS 37724 37888 . - 0 ID=cds-WP_094887627.1;Parent=gene-CCO53_RS08285;Dbxref=GenBank:WP_094887627.1;Name=WP_094887627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=CCO53_RS08285;product=hypothetical protein;protein_id=WP_094887627.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 38173 38895 . - . ID=gene-CCO53_RS08290;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=CCO53_RS08290;old_locus_tag=CCO53_08280 NZ_NPLZ01000004.1 Protein Homology CDS 38173 38895 . - 0 ID=cds-WP_080160452.1;Parent=gene-CCO53_RS08290;Dbxref=GenBank:WP_080160452.1;Name=WP_080160452.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=CCO53_RS08290;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_080160452.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 39579 39974 . + . ID=gene-CCO53_RS08295;Name=CCO53_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08295;old_locus_tag=CCO53_08285 NZ_NPLZ01000004.1 Protein Homology CDS 39579 39974 . + 0 ID=cds-WP_000422887.1;Parent=gene-CCO53_RS08295;Dbxref=GenBank:WP_000422887.1;Name=WP_000422887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=CCO53_RS08295;product=DUF1398 domain-containing protein;protein_id=WP_000422887.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 40303 40779 . + . ID=gene-CCO53_RS08300;Name=CCO53_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08300;old_locus_tag=CCO53_08290 NZ_NPLZ01000004.1 Protein Homology CDS 40303 40779 . + 0 ID=cds-WP_024798204.1;Parent=gene-CCO53_RS08300;Dbxref=GenBank:WP_024798204.1;Name=WP_024798204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=CCO53_RS08300;product=hypothetical protein;protein_id=WP_024798204.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 41217 42432 . - . ID=gene-CCO53_RS08310;Name=CCO53_RS08310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS08310;old_locus_tag=CCO53_08300;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 41217 42432 . - 0 ID=cds-CCO53_RS08310;Parent=gene-CCO53_RS08310;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001111520.1;locus_tag=CCO53_RS08310;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 42571 43254 . - . ID=gene-CCO53_RS08315;Name=CCO53_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08315;old_locus_tag=CCO53_08305 NZ_NPLZ01000004.1 Protein Homology CDS 42571 43254 . - 0 ID=cds-WP_058331774.1;Parent=gene-CCO53_RS08315;Dbxref=GenBank:WP_058331774.1;Name=WP_058331774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=CCO53_RS08315;product=PipA/GogA/GtgA family type III secretion system effector;protein_id=WP_058331774.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 43618 44941 . - . ID=gene-CCO53_RS08320;Name=CCO53_RS08320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS08320;old_locus_tag=CCO53_08310;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 43618 44941 . - 0 ID=cds-CCO53_RS08320;Parent=gene-CCO53_RS08320;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012767987.1;locus_tag=CCO53_RS08320;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 45169 45527 . + . ID=gene-CCO53_RS08330;Name=CCO53_RS08330;end_range=45527,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS08330;old_locus_tag=CCO53_08320;partial=true;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 45169 45527 . + 0 ID=cds-CCO53_RS08330;Parent=gene-CCO53_RS08330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=45527,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611788.1;locus_tag=CCO53_RS08330;partial=true;product=IS4/IS5 family transposase;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 45564 46778 . + . ID=gene-CCO53_RS08335;Name=CCO53_RS08335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS08335;old_locus_tag=CCO53_08325;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 45564 46778 . + 0 ID=cds-CCO53_RS08335;Parent=gene-CCO53_RS08335;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612254.1;locus_tag=CCO53_RS08335;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 46841 47083 . + . ID=gene-CCO53_RS08340;Name=CCO53_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08340;old_locus_tag=CCO53_08330 NZ_NPLZ01000004.1 Protein Homology CDS 46841 47083 . + 0 ID=cds-WP_058331776.1;Parent=gene-CCO53_RS08340;Dbxref=GenBank:WP_058331776.1;Name=WP_058331776.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=CCO53_RS08340;product=tyrosine-type recombinase/integrase;protein_id=WP_058331776.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 47457 47810 . - . ID=gene-CCO53_RS08350;Name=CCO53_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08350;old_locus_tag=CCO53_08340 NZ_NPLZ01000004.1 Protein Homology CDS 47457 47810 . - 0 ID=cds-WP_000722368.1;Parent=gene-CCO53_RS08350;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=CCO53_RS08350;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 47827 48702 . - . ID=gene-CCO53_RS08355;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=CCO53_RS08355;old_locus_tag=CCO53_08345 NZ_NPLZ01000004.1 Protein Homology CDS 47827 48702 . - 0 ID=cds-WP_000979699.1;Parent=gene-CCO53_RS08355;Dbxref=GenBank:WP_000979699.1;Name=WP_000979699.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=CCO53_RS08355;product=copper homeostasis membrane protein CopD;protein_id=WP_000979699.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 48703 49077 . - . ID=gene-CCO53_RS08360;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=CCO53_RS08360;old_locus_tag=CCO53_08350 NZ_NPLZ01000004.1 Protein Homology CDS 48703 49077 . - 0 ID=cds-WP_058331777.1;Parent=gene-CCO53_RS08360;Dbxref=GenBank:WP_058331777.1;Name=WP_058331777.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=CCO53_RS08360;product=CopC domain-containing protein YobA;protein_id=WP_058331777.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 49215 49445 . + . ID=gene-CCO53_RS08365;Name=CCO53_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08365;old_locus_tag=CCO53_08355 NZ_NPLZ01000004.1 Protein Homology CDS 49215 49445 . + 0 ID=cds-WP_000856224.1;Parent=gene-CCO53_RS08365;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=CCO53_RS08365;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 49553 50209 . + . ID=gene-CCO53_RS08370;Name=CCO53_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08370;old_locus_tag=CCO53_08360 NZ_NPLZ01000004.1 Protein Homology CDS 49553 50209 . + 0 ID=cds-WP_000100256.1;Parent=gene-CCO53_RS08370;Dbxref=GenBank:WP_000100256.1;Name=WP_000100256.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=CCO53_RS08370;product=nitrilase-related carbon-nitrogen hydrolase;protein_id=WP_000100256.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 50233 50931 . + . ID=gene-CCO53_RS08375;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=CCO53_RS08375;old_locus_tag=CCO53_08365 NZ_NPLZ01000004.1 Protein Homology CDS 50233 50931 . + 0 ID=cds-WP_058331778.1;Parent=gene-CCO53_RS08375;Dbxref=GenBank:WP_058331778.1;Name=WP_058331778.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=CCO53_RS08375;product=exodeoxyribonuclease X;protein_id=WP_058331778.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 50966 53017 . - . ID=gene-CCO53_RS08380;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=CCO53_RS08380;old_locus_tag=CCO53_08370 NZ_NPLZ01000004.1 Protein Homology CDS 50966 53017 . - 0 ID=cds-WP_000936999.1;Parent=gene-CCO53_RS08380;Dbxref=GenBank:WP_000936999.1;Name=WP_000936999.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=CCO53_RS08380;product=oligopeptidase B;protein_id=WP_000936999.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 53230 53889 . - . ID=gene-CCO53_RS08385;Name=CCO53_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08385;old_locus_tag=CCO53_08375 NZ_NPLZ01000004.1 Protein Homology CDS 53230 53889 . - 0 ID=cds-WP_000024706.1;Parent=gene-CCO53_RS08385;Dbxref=GenBank:WP_000024706.1;Name=WP_000024706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=CCO53_RS08385;product=tellurite resistance TerB family protein;protein_id=WP_000024706.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 53983 54336 . - . ID=gene-CCO53_RS08390;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=CCO53_RS08390;old_locus_tag=CCO53_08380 NZ_NPLZ01000004.1 Protein Homology CDS 53983 54336 . - 0 ID=cds-WP_001042123.1;Parent=gene-CCO53_RS08390;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=CCO53_RS08390;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 54404 54694 . - . ID=gene-CCO53_RS08395;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=CCO53_RS08395;old_locus_tag=CCO53_08385 NZ_NPLZ01000004.1 Protein Homology CDS 54404 54694 . - 0 ID=cds-WP_000257723.1;Parent=gene-CCO53_RS08395;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=CCO53_RS08395;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 54825 56003 . + . ID=gene-CCO53_RS08400;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=CCO53_RS08400;old_locus_tag=CCO53_08390 NZ_NPLZ01000004.1 Protein Homology CDS 54825 56003 . + 0 ID=cds-WP_001524392.1;Parent=gene-CCO53_RS08400;Dbxref=GenBank:WP_001524392.1;Name=WP_001524392.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=CCO53_RS08400;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_001524392.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 56103 56744 . - . ID=gene-CCO53_RS08405;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=CCO53_RS08405;old_locus_tag=CCO53_08395 NZ_NPLZ01000004.1 Protein Homology CDS 56103 56744 . - 0 ID=cds-WP_000800494.1;Parent=gene-CCO53_RS08405;Dbxref=GenBank:WP_000800494.1;Name=WP_000800494.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=CCO53_RS08405;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800494.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 56782 58593 . - . ID=gene-CCO53_RS08410;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=CCO53_RS08410;old_locus_tag=CCO53_08400 NZ_NPLZ01000004.1 Protein Homology CDS 56782 58593 . - 0 ID=cds-WP_058331779.1;Parent=gene-CCO53_RS08410;Dbxref=GenBank:WP_058331779.1;Name=WP_058331779.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=CCO53_RS08410;product=phosphogluconate dehydratase;protein_id=WP_058331779.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 58828 60303 . - . ID=gene-CCO53_RS08415;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CCO53_RS08415;old_locus_tag=CCO53_08405 NZ_NPLZ01000004.1 Protein Homology CDS 58828 60303 . - 0 ID=cds-WP_000301711.1;Parent=gene-CCO53_RS08415;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=CCO53_RS08415;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 60645 61514 . + . ID=gene-CCO53_RS08425;Name=CCO53_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08425;old_locus_tag=CCO53_08415 NZ_NPLZ01000004.1 Protein Homology CDS 60645 61514 . + 0 ID=cds-WP_001056719.1;Parent=gene-CCO53_RS08425;Dbxref=GenBank:WP_001056719.1;Name=WP_001056719.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=CCO53_RS08425;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001056719.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 61638 63080 . + . ID=gene-CCO53_RS08430;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CCO53_RS08430;old_locus_tag=CCO53_08420 NZ_NPLZ01000004.1 Protein Homology CDS 61638 63080 . + 0 ID=cds-WP_000091156.1;Parent=gene-CCO53_RS08430;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=CCO53_RS08430;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 63153 64124 . - . ID=gene-CCO53_RS08435;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=CCO53_RS08435;old_locus_tag=CCO53_08425 NZ_NPLZ01000004.1 Protein Homology CDS 63153 64124 . - 0 ID=cds-WP_000448401.1;Parent=gene-CCO53_RS08435;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=CCO53_RS08435;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 64241 65560 . - . ID=gene-CCO53_RS08445;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=CCO53_RS08445;old_locus_tag=CCO53_08435 NZ_NPLZ01000004.1 Protein Homology CDS 64241 65560 . - 0 ID=cds-WP_001184028.1;Parent=gene-CCO53_RS08445;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=CCO53_RS08445;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 65576 66520 . - . ID=gene-CCO53_RS08450;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=CCO53_RS08450;old_locus_tag=CCO53_08440 NZ_NPLZ01000004.1 Protein Homology CDS 65576 66520 . - 0 ID=cds-WP_000939597.1;Parent=gene-CCO53_RS08450;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=CCO53_RS08450;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 66599 67354 . + . ID=gene-CCO53_RS08455;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=CCO53_RS08455;old_locus_tag=CCO53_08445 NZ_NPLZ01000004.1 Protein Homology CDS 66599 67354 . + 0 ID=cds-WP_000203023.1;Parent=gene-CCO53_RS08455;Dbxref=GenBank:WP_000203023.1;Name=WP_000203023.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=CCO53_RS08455;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203023.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 67351 68136 . + . ID=gene-CCO53_RS08460;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=CCO53_RS08460;old_locus_tag=CCO53_08450 NZ_NPLZ01000004.1 Protein Homology CDS 67351 68136 . + 0 ID=cds-WP_000571508.1;Parent=gene-CCO53_RS08460;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=CCO53_RS08460;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 68215 69225 . - . ID=gene-CCO53_RS08465;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CCO53_RS08465;old_locus_tag=CCO53_08455 NZ_NPLZ01000004.1 Protein Homology CDS 68215 69225 . - 0 ID=cds-WP_000568508.1;Parent=gene-CCO53_RS08465;Dbxref=GenBank:WP_000568508.1;Name=WP_000568508.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=CCO53_RS08465;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568508.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 69234 69845 . - . ID=gene-CCO53_RS08470;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CCO53_RS08470;old_locus_tag=CCO53_08460 NZ_NPLZ01000004.1 Protein Homology CDS 69234 69845 . - 0 ID=cds-WP_000580335.1;Parent=gene-CCO53_RS08470;Dbxref=GenBank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=CCO53_RS08470;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 70205 70897 . - . ID=gene-CCO53_RS08475;Name=CCO53_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08475;old_locus_tag=CCO53_08465 NZ_NPLZ01000004.1 Protein Homology CDS 70205 70897 . - 0 ID=cds-WP_058331781.1;Parent=gene-CCO53_RS08475;Dbxref=GenBank:WP_058331781.1;Name=WP_058331781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=CCO53_RS08475;product=hypothetical protein;protein_id=WP_058331781.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 71106 71705 . + . ID=gene-CCO53_RS08480;Name=CCO53_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08480;old_locus_tag=CCO53_08470 NZ_NPLZ01000004.1 Protein Homology CDS 71106 71705 . + 0 ID=cds-WP_000716750.1;Parent=gene-CCO53_RS08480;Dbxref=GenBank:WP_000716750.1;Name=WP_000716750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=CCO53_RS08480;product=YebB family permuted papain-like enzyme;protein_id=WP_000716750.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 71707 72228 . - . ID=gene-CCO53_RS08485;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=CCO53_RS08485;old_locus_tag=CCO53_08475 NZ_NPLZ01000004.1 Protein Homology CDS 71707 72228 . - 0 ID=cds-WP_000022509.1;Parent=gene-CCO53_RS08485;Dbxref=GenBank:WP_000022509.1;Name=WP_000022509.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=CCO53_RS08485;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022509.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 72265 73005 . - . ID=gene-CCO53_RS08490;Name=CCO53_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08490;old_locus_tag=CCO53_08480 NZ_NPLZ01000004.1 Protein Homology CDS 72265 73005 . - 0 ID=cds-WP_000907242.1;Parent=gene-CCO53_RS08490;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=CCO53_RS08490;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 73035 73487 . - . ID=gene-CCO53_RS08495;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=CCO53_RS08495;old_locus_tag=CCO53_08485 NZ_NPLZ01000004.1 Protein Homology CDS 73035 73487 . - 0 ID=cds-WP_000653693.1;Parent=gene-CCO53_RS08495;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=CCO53_RS08495;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 73581 75353 . - . ID=gene-CCO53_RS08500;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CCO53_RS08500;old_locus_tag=CCO53_08490 NZ_NPLZ01000004.1 Protein Homology CDS 73581 75353 . - 0 ID=cds-WP_001258629.1;Parent=gene-CCO53_RS08500;Dbxref=GenBank:WP_001258629.1;Name=WP_001258629.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=CCO53_RS08500;product=aspartate--tRNA ligase;protein_id=WP_001258629.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 75678 76244 . + . ID=gene-CCO53_RS08505;Name=CCO53_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08505;old_locus_tag=CCO53_08495 NZ_NPLZ01000004.1 Protein Homology CDS 75678 76244 . + 0 ID=cds-WP_023197261.1;Parent=gene-CCO53_RS08505;Dbxref=GenBank:WP_023197261.1;Name=WP_023197261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=CCO53_RS08505;product=hydrolase;protein_id=WP_023197261.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 76241 77059 . + . ID=gene-CCO53_RS08510;Name=CCO53_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08510;old_locus_tag=CCO53_08500 NZ_NPLZ01000004.1 Protein Homology CDS 76241 77059 . + 0 ID=cds-WP_058331782.1;Parent=gene-CCO53_RS08510;Dbxref=GenBank:WP_058331782.1;Name=WP_058331782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=CCO53_RS08510;product=DUF72 domain-containing protein;protein_id=WP_058331782.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 77112 77507 . + . ID=gene-CCO53_RS08515;Name=CCO53_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08515;old_locus_tag=CCO53_08505 NZ_NPLZ01000004.1 Protein Homology CDS 77112 77507 . + 0 ID=cds-WP_000252975.1;Parent=gene-CCO53_RS08515;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=CCO53_RS08515;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 77548 78291 . + . ID=gene-CCO53_RS08520;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=CCO53_RS08520;old_locus_tag=CCO53_08510 NZ_NPLZ01000004.1 Protein Homology CDS 77548 78291 . + 0 ID=cds-WP_000019609.1;Parent=gene-CCO53_RS08520;Dbxref=GenBank:WP_000019609.1;Name=WP_000019609.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=CCO53_RS08520;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019609.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 78288 79259 . + . ID=gene-CCO53_RS08525;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=CCO53_RS08525;old_locus_tag=CCO53_08515 NZ_NPLZ01000004.1 Protein Homology CDS 78288 79259 . + 0 ID=cds-WP_080160496.1;Parent=gene-CCO53_RS08525;Dbxref=GenBank:WP_080160496.1;Name=WP_080160496.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=CCO53_RS08525;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_080160496.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 79495 80241 . - . ID=gene-CCO53_RS08535;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=CCO53_RS08535;old_locus_tag=CCO53_08525 NZ_NPLZ01000004.1 Protein Homology CDS 79495 80241 . - 0 ID=cds-WP_094887630.1;Parent=gene-CCO53_RS08535;Dbxref=GenBank:WP_094887630.1;Name=WP_094887630.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=CCO53_RS08535;product=copper homeostasis protein CutC;protein_id=WP_094887630.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 80261 80830 . - . ID=gene-CCO53_RS08540;Name=CCO53_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08540;old_locus_tag=CCO53_08530 NZ_NPLZ01000004.1 Protein Homology CDS 80261 80830 . - 0 ID=cds-WP_094887631.1;Parent=gene-CCO53_RS08540;Dbxref=GenBank:WP_094887631.1;Name=WP_094887631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=CCO53_RS08540;product=VOC family protein;protein_id=WP_094887631.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 81067 82800 . + . ID=gene-CCO53_RS08545;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CCO53_RS08545;old_locus_tag=CCO53_08535 NZ_NPLZ01000004.1 Protein Homology CDS 81067 82800 . + 0 ID=cds-WP_001025363.1;Parent=gene-CCO53_RS08545;Dbxref=GenBank:WP_001025363.1;Name=WP_001025363.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=CCO53_RS08545;product=arginine--tRNA ligase;protein_id=WP_001025363.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 82989 84860 . + . ID=gene-CCO53_RS08550;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO53_RS08550;old_locus_tag=CCO53_08540 NZ_NPLZ01000004.1 Protein Homology CDS 82989 84860 . + 0 ID=cds-WP_000142859.1;Parent=gene-CCO53_RS08550;Dbxref=GenBank:WP_000142859.1;Name=WP_000142859.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=CCO53_RS08550;product=penicillin-binding protein 2;protein_id=WP_000142859.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 84914 86053 . - . ID=gene-CCO53_RS08555;Name=CCO53_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08555;old_locus_tag=CCO53_08545 NZ_NPLZ01000004.1 Protein Homology CDS 84914 86053 . - 0 ID=cds-WP_000989908.1;Parent=gene-CCO53_RS08555;Dbxref=GenBank:WP_000989908.1;Name=WP_000989908.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=CCO53_RS08555;product=glycoside hydrolase family 88/105 protein;protein_id=WP_000989908.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 86290 86682 . - . ID=gene-CCO53_RS08560;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=CCO53_RS08560;old_locus_tag=CCO53_08550 NZ_NPLZ01000004.1 Protein Homology CDS 86290 86682 . - 0 ID=cds-WP_001233619.1;Parent=gene-CCO53_RS08560;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=CCO53_RS08560;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 86682 88760 . - . ID=gene-CCO53_RS08565;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO53_RS08565;old_locus_tag=CCO53_08555 NZ_NPLZ01000004.1 Protein Homology CDS 86682 88760 . - 0 ID=cds-WP_000002392.1;Parent=gene-CCO53_RS08565;Dbxref=GenBank:WP_000002392.1;Name=WP_000002392.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=CCO53_RS08565;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002392.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 88753 89904 . - . ID=gene-CCO53_RS08570;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=CCO53_RS08570;old_locus_tag=CCO53_08560 NZ_NPLZ01000004.1 Protein Homology CDS 88753 89904 . - 0 ID=cds-WP_000797081.1;Parent=gene-CCO53_RS08570;Dbxref=GenBank:WP_000797081.1;Name=WP_000797081.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=CCO53_RS08570;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797081.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 90098 90742 . - . ID=gene-CCO53_RS08575;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=CCO53_RS08575;old_locus_tag=CCO53_08565 NZ_NPLZ01000004.1 Protein Homology CDS 90098 90742 . - 0 ID=cds-WP_000983585.1;Parent=gene-CCO53_RS08575;Dbxref=GenBank:WP_000983585.1;Name=WP_000983585.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=CCO53_RS08575;product=protein phosphatase CheZ;protein_id=WP_000983585.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 90753 91142 . - . ID=gene-CCO53_RS08580;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=CCO53_RS08580;old_locus_tag=CCO53_08570 NZ_NPLZ01000004.1 Protein Homology CDS 90753 91142 . - 0 ID=cds-WP_000763861.1;Parent=gene-CCO53_RS08580;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=CCO53_RS08580;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 91160 92209 . - . ID=gene-CCO53_RS08585;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=CCO53_RS08585;old_locus_tag=CCO53_08575 NZ_NPLZ01000004.1 Protein Homology CDS 91160 92209 . - 0 ID=cds-WP_000036392.1;Parent=gene-CCO53_RS08585;Dbxref=GenBank:WP_000036392.1;Name=WP_000036392.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=CCO53_RS08585;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036392.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 92206 93072 . - . ID=gene-CCO53_RS08590;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=CCO53_RS08590;old_locus_tag=CCO53_08580 NZ_NPLZ01000004.1 Protein Homology CDS 92206 93072 . - 0 ID=cds-WP_000204362.1;Parent=gene-CCO53_RS08590;Dbxref=GenBank:WP_000204362.1;Name=WP_000204362.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=CCO53_RS08590;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204362.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 93226 94887 . - . ID=gene-CCO53_RS08595;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=CCO53_RS08595;old_locus_tag=CCO53_08585 NZ_NPLZ01000004.1 Protein Homology CDS 93226 94887 . - 0 ID=cds-WP_000483265.1;Parent=gene-CCO53_RS08595;Dbxref=GenBank:WP_000483265.1;Name=WP_000483265.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=CCO53_RS08595;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483265.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 95124 95627 . - . ID=gene-CCO53_RS08600;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=CCO53_RS08600;old_locus_tag=CCO53_08590 NZ_NPLZ01000004.1 Protein Homology CDS 95124 95627 . - 0 ID=cds-WP_000147295.1;Parent=gene-CCO53_RS08600;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=CCO53_RS08600;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 95648 97663 . - . ID=gene-CCO53_RS08605;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=CCO53_RS08605;old_locus_tag=CCO53_08595 NZ_NPLZ01000004.1 Protein Homology CDS 95648 97663 . - 0 ID=cds-WP_000061302.1;Parent=gene-CCO53_RS08605;Dbxref=GenBank:WP_000061302.1;Name=WP_000061302.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=CCO53_RS08605;product=chemotaxis protein CheA;protein_id=WP_000061302.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 97668 98597 . - . ID=gene-CCO53_RS08610;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=CCO53_RS08610;old_locus_tag=CCO53_08600 NZ_NPLZ01000004.1 Protein Homology CDS 97668 98597 . - 0 ID=cds-WP_000795653.1;Parent=gene-CCO53_RS08610;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=CCO53_RS08610;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 98594 99481 . - . ID=gene-CCO53_RS08615;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=CCO53_RS08615;old_locus_tag=CCO53_08605 NZ_NPLZ01000004.1 Protein Homology CDS 98594 99481 . - 0 ID=cds-WP_000906312.1;Parent=gene-CCO53_RS08615;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=CCO53_RS08615;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 99606 100190 . - . ID=gene-CCO53_RS08620;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=CCO53_RS08620;old_locus_tag=CCO53_08610 NZ_NPLZ01000004.1 Protein Homology CDS 99606 100190 . - 0 ID=cds-WP_000605987.1;Parent=gene-CCO53_RS08620;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=CCO53_RS08620;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 100187 100528 . - . ID=gene-CCO53_RS08625;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=CCO53_RS08625;old_locus_tag=CCO53_08615 NZ_NPLZ01000004.1 Protein Homology CDS 100187 100528 . - 0 ID=cds-WP_176456002.1;Parent=gene-CCO53_RS08625;Dbxref=GenBank:WP_176456002.1;Name=WP_176456002.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=CCO53_RS08625;product=flagellar transcriptional regulator FlhD;protein_id=WP_176456002.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 101211 101327 . + . ID=gene-CCO53_RS08630;Name=CCO53_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08630;old_locus_tag=CCO53_08620 NZ_NPLZ01000004.1 Protein Homology CDS 101211 101327 . + 0 ID=cds-WP_001617301.1;Parent=gene-CCO53_RS08630;Dbxref=GenBank:WP_001617301.1;Name=WP_001617301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=CCO53_RS08630;product=hypothetical protein;protein_id=WP_001617301.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 101324 101752 . + . ID=gene-CCO53_RS08635;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=CCO53_RS08635;old_locus_tag=CCO53_08625 NZ_NPLZ01000004.1 Protein Homology CDS 101324 101752 . + 0 ID=cds-WP_000122606.1;Parent=gene-CCO53_RS08635;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=CCO53_RS08635;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 101770 103191 . - . ID=gene-CCO53_RS08640;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=CCO53_RS08640;old_locus_tag=CCO53_08630 NZ_NPLZ01000004.1 Protein Homology CDS 101770 103191 . - 0 ID=cds-WP_094887633.1;Parent=gene-CCO53_RS08640;Dbxref=GenBank:WP_094887633.1;Name=WP_094887633.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=CCO53_RS08640;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_094887633.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 103166 103969 . - . ID=gene-CCO53_RS08645;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=CCO53_RS08645;old_locus_tag=CCO53_08635 NZ_NPLZ01000004.1 Protein Homology CDS 103166 103969 . - 0 ID=cds-WP_000840114.1;Parent=gene-CCO53_RS08645;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=CCO53_RS08645;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 104192 104373 . - . ID=gene-CCO53_RS08650;Name=araH;end_range=104373,.;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=CCO53_RS08650;old_locus_tag=CCO53_08640;partial=true;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 104192 104373 . - 0 ID=cds-CCO53_RS08650;Parent=gene-CCO53_RS08650;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=104373,.;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=CCO53_RS08650;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 104485 105042 . - . ID=gene-CCO53_RS08655;Name=CCO53_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08655;old_locus_tag=CCO53_08645 NZ_NPLZ01000004.1 Protein Homology CDS 104485 105042 . - 0 ID=cds-WP_000754796.1;Parent=gene-CCO53_RS08655;Dbxref=GenBank:WP_000754796.1;Name=WP_000754796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=CCO53_RS08655;product=DJ-1/PfpI family protein;protein_id=WP_000754796.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 105593 106096 . + . ID=gene-CCO53_RS08660;Name=CCO53_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08660;old_locus_tag=CCO53_08650 NZ_NPLZ01000004.1 Protein Homology CDS 105593 106096 . + 0 ID=cds-WP_000741707.1;Parent=gene-CCO53_RS08660;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=CCO53_RS08660;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 106275 106913 . - . ID=gene-CCO53_RS08665;Name=CCO53_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08665;old_locus_tag=CCO53_08655 NZ_NPLZ01000004.1 Protein Homology CDS 106275 106913 . - 0 ID=cds-WP_023202347.1;Parent=gene-CCO53_RS08665;Dbxref=GenBank:WP_023202347.1;Name=WP_023202347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684811.1;locus_tag=CCO53_RS08665;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_023202347.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 107169 107504 . + . ID=gene-CCO53_RS08670;Name=CCO53_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08670;old_locus_tag=CCO53_08660 NZ_NPLZ01000004.1 Protein Homology CDS 107169 107504 . + 0 ID=cds-WP_000803229.1;Parent=gene-CCO53_RS08670;Dbxref=GenBank:WP_000803229.1;Name=WP_000803229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=CCO53_RS08670;product=YecR-like lipofamily protein;protein_id=WP_000803229.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 107744 108241 . + . ID=gene-CCO53_RS08675;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=CCO53_RS08675;old_locus_tag=CCO53_08665 NZ_NPLZ01000004.1 Protein Homology CDS 107744 108241 . + 0 ID=cds-WP_000920619.1;Parent=gene-CCO53_RS08675;Dbxref=GenBank:WP_000920619.1;Name=WP_000920619.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=CCO53_RS08675;product=non-heme ferritin;protein_id=WP_000920619.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 108287 108526 . - . ID=gene-CCO53_RS08680;Name=CCO53_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08680;old_locus_tag=CCO53_08670 NZ_NPLZ01000004.1 Protein Homology CDS 108287 108526 . - 0 ID=cds-WP_000377238.1;Parent=gene-CCO53_RS08680;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=CCO53_RS08680;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 108753 109964 . + . ID=gene-CCO53_RS08685;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=CCO53_RS08685;old_locus_tag=CCO53_08675 NZ_NPLZ01000004.1 Protein Homology CDS 108753 109964 . + 0 ID=cds-WP_001747700.1;Parent=gene-CCO53_RS08685;Dbxref=GenBank:WP_001747700.1;Name=WP_001747700.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=CCO53_RS08685;product=tyrosine transporter TyrP;protein_id=WP_001747700.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 110039 110704 . - . ID=gene-CCO53_RS08690;Name=CCO53_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08690;old_locus_tag=CCO53_08680 NZ_NPLZ01000004.1 Protein Homology CDS 110039 110704 . - 0 ID=cds-WP_058331787.1;Parent=gene-CCO53_RS08690;Dbxref=GenBank:WP_058331787.1;Name=WP_058331787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=CCO53_RS08690;product=YecA family protein;protein_id=WP_058331787.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 110943 111269 . - . ID=gene-CCO53_RS08695;Name=CCO53_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08695;old_locus_tag=CCO53_08685 NZ_NPLZ01000004.1 Protein Homology CDS 110943 111269 . - 0 ID=cds-WP_000240837.1;Parent=gene-CCO53_RS08695;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=CCO53_RS08695;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 111482 112921 . - . ID=gene-CCO53_RS08700;Name=CCO53_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08700;old_locus_tag=CCO53_08690 NZ_NPLZ01000004.1 Protein Homology CDS 111482 112921 . - 0 ID=cds-WP_080198063.1;Parent=gene-CCO53_RS08700;Dbxref=GenBank:WP_080198063.1;Name=WP_080198063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=CCO53_RS08700;product=SH3 domain-containing C40 family peptidase;protein_id=WP_080198063.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 113135 113467 . - . ID=gene-CCO53_RS08705;Name=CCO53_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08705;old_locus_tag=CCO53_08695 NZ_NPLZ01000004.1 Protein Homology CDS 113135 113467 . - 0 ID=cds-WP_001556026.1;Parent=gene-CCO53_RS08705;Dbxref=GenBank:WP_001556026.1;Name=WP_001556026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=CCO53_RS08705;product=hypothetical protein;protein_id=WP_001556026.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 113716 113802 . - . ID=gene-CCO53_RS08710;Name=CCO53_RS08710;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS08710;old_locus_tag=CCO53_08700 NZ_NPLZ01000004.1 tRNAscan-SE tRNA 113716 113802 . - . ID=rna-CCO53_RS08710;Parent=gene-CCO53_RS08710;anticodon=(pos:complement(113766..113768));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS08710;product=tRNA-Leu NZ_NPLZ01000004.1 tRNAscan-SE exon 113716 113802 . - . ID=exon-CCO53_RS08710-1;Parent=rna-CCO53_RS08710;anticodon=(pos:complement(113766..113768));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS08710;product=tRNA-Leu NZ_NPLZ01000004.1 RefSeq gene 113814 113887 . - . ID=gene-CCO53_RS08715;Name=CCO53_RS08715;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS08715;old_locus_tag=CCO53_08705 NZ_NPLZ01000004.1 tRNAscan-SE tRNA 113814 113887 . - . ID=rna-CCO53_RS08715;Parent=gene-CCO53_RS08715;anticodon=(pos:complement(113853..113855));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS08715;product=tRNA-Cys NZ_NPLZ01000004.1 tRNAscan-SE exon 113814 113887 . - . ID=exon-CCO53_RS08715-1;Parent=rna-CCO53_RS08715;anticodon=(pos:complement(113853..113855));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS08715;product=tRNA-Cys NZ_NPLZ01000004.1 RefSeq gene 113940 114015 . - . ID=gene-CCO53_RS08720;Name=CCO53_RS08720;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS08720;old_locus_tag=CCO53_08710 NZ_NPLZ01000004.1 tRNAscan-SE tRNA 113940 114015 . - . ID=rna-CCO53_RS08720;Parent=gene-CCO53_RS08720;anticodon=(pos:complement(113980..113982));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS08720;product=tRNA-Gly NZ_NPLZ01000004.1 tRNAscan-SE exon 113940 114015 . - . ID=exon-CCO53_RS08720-1;Parent=rna-CCO53_RS08720;anticodon=(pos:complement(113980..113982));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS08720;product=tRNA-Gly NZ_NPLZ01000004.1 RefSeq gene 114167 114715 . - . ID=gene-CCO53_RS08725;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CCO53_RS08725;old_locus_tag=CCO53_08715 NZ_NPLZ01000004.1 Protein Homology CDS 114167 114715 . - 0 ID=cds-WP_001160192.1;Parent=gene-CCO53_RS08725;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=CCO53_RS08725;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 114772 116604 . - . ID=gene-CCO53_RS08730;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CCO53_RS08730;old_locus_tag=CCO53_08720 NZ_NPLZ01000004.1 Protein Homology CDS 114772 116604 . - 0 ID=cds-WP_023254656.1;Parent=gene-CCO53_RS08730;Dbxref=GenBank:WP_023254656.1;Name=WP_023254656.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=CCO53_RS08730;product=excinuclease ABC subunit UvrC;protein_id=WP_023254656.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 116601 117257 . - . ID=gene-CCO53_RS08735;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=CCO53_RS08735;old_locus_tag=CCO53_08725 NZ_NPLZ01000004.1 Protein Homology CDS 116601 117257 . - 0 ID=cds-WP_000611323.1;Parent=gene-CCO53_RS08735;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=CCO53_RS08735;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 117569 117724 . + . ID=gene-CCO53_RS08740;Name=CCO53_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08740;old_locus_tag=CCO53_08730 NZ_NPLZ01000004.1 Protein Homology CDS 117569 117724 . + 0 ID=cds-WP_000546186.1;Parent=gene-CCO53_RS08740;Dbxref=GenBank:WP_000546186.1;Name=WP_000546186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=CCO53_RS08740;product=hypothetical protein;protein_id=WP_000546186.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 117721 117945 . + . ID=gene-CCO53_RS08745;Name=CCO53_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08745;old_locus_tag=CCO53_08735 NZ_NPLZ01000004.1 Protein Homology CDS 117721 117945 . + 0 ID=cds-WP_000106483.1;Parent=gene-CCO53_RS08745;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=CCO53_RS08745;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 118012 118734 . - . ID=gene-CCO53_RS08750;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=CCO53_RS08750;old_locus_tag=CCO53_08740 NZ_NPLZ01000004.1 Protein Homology CDS 118012 118734 . - 0 ID=cds-WP_023202351.1;Parent=gene-CCO53_RS08750;Dbxref=GenBank:WP_023202351.1;Name=WP_023202351.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=CCO53_RS08750;product=transcriptional regulator SdiA;protein_id=WP_023202351.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 118966 119718 . - . ID=gene-CCO53_RS08755;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=CCO53_RS08755;old_locus_tag=CCO53_08745 NZ_NPLZ01000004.1 Protein Homology CDS 118966 119718 . - 0 ID=cds-WP_001273025.1;Parent=gene-CCO53_RS08755;Dbxref=GenBank:WP_001273025.1;Name=WP_001273025.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=CCO53_RS08755;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273025.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 119715 120383 . - . ID=gene-CCO53_RS08760;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=CCO53_RS08760;old_locus_tag=CCO53_08750 NZ_NPLZ01000004.1 Protein Homology CDS 119715 120383 . - 0 ID=cds-WP_001158238.1;Parent=gene-CCO53_RS08760;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=CCO53_RS08760;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 120404 121390 . - . ID=gene-CCO53_RS08765;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=CCO53_RS08765;old_locus_tag=CCO53_08755 NZ_NPLZ01000004.1 Protein Homology CDS 120404 121390 . - 0 ID=cds-WP_001128188.1;Parent=gene-CCO53_RS08765;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=CCO53_RS08765;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 121544 122344 . - . ID=gene-CCO53_RS08770;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=CCO53_RS08770;old_locus_tag=CCO53_08760 NZ_NPLZ01000004.1 Protein Homology CDS 121544 122344 . - 0 ID=cds-WP_094887634.1;Parent=gene-CCO53_RS08770;Dbxref=GenBank:WP_094887634.1;Name=WP_094887634.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=CCO53_RS08770;product=cystine ABC transporter substrate-binding protein;protein_id=WP_094887634.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 122491 123042 . - . ID=gene-CCO53_RS08775;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=CCO53_RS08775;old_locus_tag=CCO53_08765 NZ_NPLZ01000004.1 Protein Homology CDS 122491 123042 . - 0 ID=cds-WP_000218080.1;Parent=gene-CCO53_RS08775;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=CCO53_RS08775;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 123101 123820 . - . ID=gene-CCO53_RS08780;Name=CCO53_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08780;old_locus_tag=CCO53_08770 NZ_NPLZ01000004.1 Protein Homology CDS 123101 123820 . - 0 ID=cds-WP_001087453.1;Parent=gene-CCO53_RS08780;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=CCO53_RS08780;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 124017 125222 . - . ID=gene-CCO53_RS08785;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=CCO53_RS08785;old_locus_tag=CCO53_08775 NZ_NPLZ01000004.1 Protein Homology CDS 124017 125222 . - 0 ID=cds-WP_094887635.1;Parent=gene-CCO53_RS08785;Dbxref=GenBank:WP_094887635.1;Name=WP_094887635.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=CCO53_RS08785;product=flagellin lysine-N-methylase;protein_id=WP_094887635.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 125301 126569 . - . ID=gene-CCO53_RS08790;Name=CCO53_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08790;old_locus_tag=CCO53_08780 NZ_NPLZ01000004.1 Protein Homology CDS 125301 126569 . - 0 ID=cds-WP_094887636.1;Parent=gene-CCO53_RS08790;Dbxref=GenBank:WP_094887636.1;Name=WP_094887636.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079812.1;locus_tag=CCO53_RS08790;product=FliC/FljB family flagellin;protein_id=WP_094887636.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 126825 128228 . + . ID=gene-CCO53_RS08800;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=CCO53_RS08800;old_locus_tag=CCO53_08790 NZ_NPLZ01000004.1 Protein Homology CDS 126825 128228 . + 0 ID=cds-WP_031605229.1;Parent=gene-CCO53_RS08800;Dbxref=GenBank:WP_031605229.1;Name=WP_031605229.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=CCO53_RS08800;product=flagellar filament capping protein FliD;protein_id=WP_031605229.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 128243 128650 . + . ID=gene-CCO53_RS08805;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=CCO53_RS08805;old_locus_tag=CCO53_08795 NZ_NPLZ01000004.1 Protein Homology CDS 128243 128650 . + 0 ID=cds-WP_000287764.1;Parent=gene-CCO53_RS08805;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=CCO53_RS08805;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 128650 129018 . + . ID=gene-CCO53_RS08810;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=CCO53_RS08810;old_locus_tag=CCO53_08800 NZ_NPLZ01000004.1 Protein Homology CDS 128650 129018 . + 0 ID=cds-WP_000204899.1;Parent=gene-CCO53_RS08810;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=CCO53_RS08810;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 129090 130574 . + . ID=gene-CCO53_RS08815;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=CCO53_RS08815;old_locus_tag=CCO53_08805 NZ_NPLZ01000004.1 Protein Homology CDS 129090 130574 . + 0 ID=cds-WP_094887638.1;Parent=gene-CCO53_RS08815;Dbxref=GenBank:WP_094887638.1;Name=WP_094887638.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=CCO53_RS08815;product=alpha-amylase;protein_id=WP_094887638.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 130614 131027 . - . ID=gene-CCO53_RS08820;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=CCO53_RS08820;old_locus_tag=CCO53_08810 NZ_NPLZ01000004.1 Protein Homology CDS 130614 131027 . - 0 ID=cds-WP_000754694.1;Parent=gene-CCO53_RS08820;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=CCO53_RS08820;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 131213 132418 . + . ID=gene-CCO53_RS08825;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=CCO53_RS08825;old_locus_tag=CCO53_08815 NZ_NPLZ01000004.1 Protein Homology CDS 131213 132418 . + 0 ID=cds-WP_001535037.1;Parent=gene-CCO53_RS08825;Dbxref=GenBank:WP_001535037.1;Name=WP_001535037.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=CCO53_RS08825;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001535037.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 132415 132648 . + . ID=gene-CCO53_RS08830;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=CCO53_RS08830;old_locus_tag=CCO53_08820 NZ_NPLZ01000004.1 Protein Homology CDS 132415 132648 . + 0 ID=cds-WP_000790504.1;Parent=gene-CCO53_RS08830;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=CCO53_RS08830;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 132913 133299 . + . ID=gene-CCO53_RS08835;Name=CCO53_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08835;old_locus_tag=CCO53_08825 NZ_NPLZ01000004.1 Protein Homology CDS 132913 133299 . + 0 ID=cds-WP_077905134.1;Parent=gene-CCO53_RS08835;Dbxref=GenBank:WP_077905134.1;Name=WP_077905134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=CCO53_RS08835;product=hypothetical protein;protein_id=WP_077905134.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 133420 133734 . - . ID=gene-CCO53_RS08840;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=CCO53_RS08840;old_locus_tag=CCO53_08830 NZ_NPLZ01000004.1 Protein Homology CDS 133420 133734 . - 0 ID=cds-WP_000719037.1;Parent=gene-CCO53_RS08840;Dbxref=GenBank:WP_000719037.1;Name=WP_000719037.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=CCO53_RS08840;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719037.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 133951 135633 . + . ID=gene-CCO53_RS08845;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=CCO53_RS08845;old_locus_tag=CCO53_08835 NZ_NPLZ01000004.1 Protein Homology CDS 133951 135633 . + 0 ID=cds-WP_001276828.1;Parent=gene-CCO53_RS08845;Dbxref=GenBank:WP_001276828.1;Name=WP_001276828.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=CCO53_RS08845;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_001276828.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 135626 136621 . + . ID=gene-CCO53_RS08850;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=CCO53_RS08850;old_locus_tag=CCO53_08840 NZ_NPLZ01000004.1 Protein Homology CDS 135626 136621 . + 0 ID=cds-WP_000067735.1;Parent=gene-CCO53_RS08850;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=CCO53_RS08850;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 136614 137321 . + . ID=gene-CCO53_RS08855;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=CCO53_RS08855;old_locus_tag=CCO53_08845 NZ_NPLZ01000004.1 Protein Homology CDS 136614 137321 . + 0 ID=cds-WP_000064163.1;Parent=gene-CCO53_RS08855;Dbxref=GenBank:WP_000064163.1;Name=WP_000064163.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=CCO53_RS08855;product=flagellar assembly protein FliH;protein_id=WP_000064163.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 137321 138691 . + . ID=gene-CCO53_RS08860;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=CCO53_RS08860;old_locus_tag=CCO53_08850 NZ_NPLZ01000004.1 Protein Homology CDS 137321 138691 . + 0 ID=cds-WP_000213257.1;Parent=gene-CCO53_RS08860;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=CCO53_RS08860;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 138713 139156 . + . ID=gene-CCO53_RS08865;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=CCO53_RS08865;old_locus_tag=CCO53_08855 NZ_NPLZ01000004.1 Protein Homology CDS 138713 139156 . + 0 ID=cds-WP_000046982.1;Parent=gene-CCO53_RS08865;Dbxref=GenBank:WP_000046982.1;Name=WP_000046982.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=CCO53_RS08865;product=flagellar export protein FliJ;protein_id=WP_000046982.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 139153 140376 . + . ID=gene-CCO53_RS08870;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=CCO53_RS08870;old_locus_tag=CCO53_08860 NZ_NPLZ01000004.1 Protein Homology CDS 139153 140376 . + 0 ID=cds-WP_000631673.1;Parent=gene-CCO53_RS08870;Dbxref=GenBank:WP_000631673.1;Name=WP_000631673.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=CCO53_RS08870;product=flagellar hook length control protein FliK;protein_id=WP_000631673.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 140481 140948 . + . ID=gene-CCO53_RS08875;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=CCO53_RS08875;old_locus_tag=CCO53_08865 NZ_NPLZ01000004.1 Protein Homology CDS 140481 140948 . + 0 ID=cds-WP_000132169.1;Parent=gene-CCO53_RS08875;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=CCO53_RS08875;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 140953 141957 . + . ID=gene-CCO53_RS08880;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=CCO53_RS08880;old_locus_tag=CCO53_08870 NZ_NPLZ01000004.1 Protein Homology CDS 140953 141957 . + 0 ID=cds-WP_000502811.1;Parent=gene-CCO53_RS08880;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=CCO53_RS08880;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 141954 142367 . + . ID=gene-CCO53_RS08885;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=CCO53_RS08885;old_locus_tag=CCO53_08875 NZ_NPLZ01000004.1 Protein Homology CDS 141954 142367 . + 0 ID=cds-WP_001282111.1;Parent=gene-CCO53_RS08885;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=CCO53_RS08885;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 142367 142744 . + . ID=gene-CCO53_RS08890;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=CCO53_RS08890;old_locus_tag=CCO53_08880 NZ_NPLZ01000004.1 Protein Homology CDS 142367 142744 . + 0 ID=cds-WP_000978276.1;Parent=gene-CCO53_RS08890;Dbxref=GenBank:WP_000978276.1;Name=WP_000978276.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=CCO53_RS08890;product=flagellar biosynthetic protein FliO;protein_id=WP_000978276.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 142744 143481 . + . ID=gene-CCO53_RS08895;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=CCO53_RS08895;old_locus_tag=CCO53_08885 NZ_NPLZ01000004.1 Protein Homology CDS 142744 143481 . + 0 ID=cds-WP_001253414.1;Parent=gene-CCO53_RS08895;Dbxref=GenBank:WP_001253414.1;Name=WP_001253414.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=CCO53_RS08895;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253414.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 143491 143760 . + . ID=gene-CCO53_RS08900;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=CCO53_RS08900;old_locus_tag=CCO53_08890 NZ_NPLZ01000004.1 Protein Homology CDS 143491 143760 . + 0 ID=cds-WP_000187355.1;Parent=gene-CCO53_RS08900;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=CCO53_RS08900;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 143769 144563 . + . ID=gene-CCO53_RS08905;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=CCO53_RS08905;old_locus_tag=CCO53_08895 NZ_NPLZ01000004.1 Protein Homology CDS 143769 144563 . + 0 ID=cds-WP_000616953.1;Parent=gene-CCO53_RS08905;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=CCO53_RS08905;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 144844 145467 . + . ID=gene-CCO53_RS08910;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=CCO53_RS08910;old_locus_tag=CCO53_08900 NZ_NPLZ01000004.1 Protein Homology CDS 144844 145467 . + 0 ID=cds-WP_000103974.1;Parent=gene-CCO53_RS08910;Dbxref=GenBank:WP_000103974.1;Name=WP_000103974.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=CCO53_RS08910;product=transcriptional regulator RcsA;protein_id=WP_000103974.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 145506 145700 . - . ID=gene-CCO53_RS08915;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=CCO53_RS08915;old_locus_tag=CCO53_08905 NZ_NPLZ01000004.1 Protein Homology CDS 145506 145700 . - 0 ID=cds-WP_000867218.1;Parent=gene-CCO53_RS08915;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=CCO53_RS08915;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 145829 146056 . + . ID=gene-CCO53_RS08920;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=CCO53_RS08920;old_locus_tag=CCO53_08910 NZ_NPLZ01000004.1 Protein Homology CDS 145829 146056 . + 0 ID=cds-WP_000844798.1;Parent=gene-CCO53_RS08920;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=CCO53_RS08920;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 146366 147181 . + . ID=gene-CCO53_RS08925;Name=CCO53_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08925;old_locus_tag=CCO53_08915 NZ_NPLZ01000004.1 Protein Homology CDS 146366 147181 . + 0 ID=cds-WP_000948786.1;Parent=gene-CCO53_RS08925;Dbxref=GenBank:WP_000948786.1;Name=WP_000948786.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=CCO53_RS08925;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948786.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 147160 148872 . - . ID=gene-CCO53_RS08930;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=CCO53_RS08930;old_locus_tag=CCO53_08920 NZ_NPLZ01000004.1 Protein Homology CDS 147160 148872 . - 0 ID=cds-WP_001119828.1;Parent=gene-CCO53_RS08930;Dbxref=GenBank:WP_001119828.1;Name=WP_001119828.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=CCO53_RS08930;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119828.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 149037 149222 . - . ID=gene-CCO53_RS08935;Name=CCO53_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08935;old_locus_tag=CCO53_08925 NZ_NPLZ01000004.1 Protein Homology CDS 149037 149222 . - 0 ID=cds-WP_000232161.1;Parent=gene-CCO53_RS08935;Dbxref=GenBank:WP_000232161.1;Name=WP_000232161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=CCO53_RS08935;product=YodC family protein;protein_id=WP_000232161.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 149299 150216 . - . ID=gene-CCO53_RS08940;Name=CCO53_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08940;old_locus_tag=CCO53_08930 NZ_NPLZ01000004.1 Protein Homology CDS 149299 150216 . - 0 ID=cds-WP_085920526.1;Parent=gene-CCO53_RS08940;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=CCO53_RS08940;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 150386 151306 . + . ID=gene-CCO53_RS08945;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=CCO53_RS08945;old_locus_tag=CCO53_08935 NZ_NPLZ01000004.1 Protein Homology CDS 150386 151306 . + 0 ID=cds-WP_001212265.1;Parent=gene-CCO53_RS08945;Dbxref=GenBank:WP_001212265.1;Name=WP_001212265.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=CCO53_RS08945;product=drug/metabolite exporter YedA;protein_id=WP_001212265.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 151295 151765 . - . ID=gene-CCO53_RS08950;Name=CCO53_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08950;old_locus_tag=CCO53_08940 NZ_NPLZ01000004.1 Protein Homology CDS 151295 151765 . - 0 ID=cds-WP_000785978.1;Parent=gene-CCO53_RS08950;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=CCO53_RS08950;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 151746 153176 . - . ID=gene-CCO53_RS08955;Name=CCO53_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08955;old_locus_tag=CCO53_08945 NZ_NPLZ01000004.1 Protein Homology CDS 151746 153176 . - 0 ID=cds-WP_094887639.1;Parent=gene-CCO53_RS08955;Dbxref=GenBank:WP_094887639.1;Name=WP_094887639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=CCO53_RS08955;product=DNA cytosine methyltransferase;protein_id=WP_094887639.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 153250 153945 . - . ID=gene-CCO53_RS08960;Name=CCO53_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08960;old_locus_tag=CCO53_08950 NZ_NPLZ01000004.1 Protein Homology CDS 153250 153945 . - 0 ID=cds-WP_000377038.1;Parent=gene-CCO53_RS08960;Dbxref=GenBank:WP_000377038.1;Name=WP_000377038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=CCO53_RS08960;product=phosphohydrolase;protein_id=WP_000377038.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 154025 154336 . - . ID=gene-CCO53_RS08965;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=CCO53_RS08965;old_locus_tag=CCO53_08955 NZ_NPLZ01000004.1 Protein Homology CDS 154025 154336 . - 0 ID=cds-WP_000107437.1;Parent=gene-CCO53_RS08965;Dbxref=GenBank:WP_000107437.1;Name=WP_000107437.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=CCO53_RS08965;product=cell division protein DrpB;protein_id=WP_000107437.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 154987 156180 . + . ID=gene-CCO53_RS08970;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=CCO53_RS08970;old_locus_tag=CCO53_08960 NZ_NPLZ01000004.1 Protein Homology CDS 154987 156180 . + 0 ID=cds-WP_094887640.1;Parent=gene-CCO53_RS08970;Dbxref=GenBank:WP_094887640.1;Name=WP_094887640.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=CCO53_RS08970;product=porin OmpS1;protein_id=WP_094887640.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 156440 156628 . - . ID=gene-CCO53_RS08975;Name=CCO53_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08975;old_locus_tag=CCO53_08965 NZ_NPLZ01000004.1 Protein Homology CDS 156440 156628 . - 0 ID=cds-WP_024131109.1;Parent=gene-CCO53_RS08975;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=CCO53_RS08975;product=hypothetical protein;protein_id=WP_024131109.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 156639 156851 . - . ID=gene-CCO53_RS08980;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO53_RS08980;old_locus_tag=CCO53_08970 NZ_NPLZ01000004.1 Protein Homology CDS 156639 156851 . - 0 ID=cds-WP_000208509.1;Parent=gene-CCO53_RS08980;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=CCO53_RS08980;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 157307 158575 . - . ID=gene-CCO53_RS08985;Name=CCO53_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08985;old_locus_tag=CCO53_08975 NZ_NPLZ01000004.1 Protein Homology CDS 157307 158575 . - 0 ID=cds-WP_076726789.1;Parent=gene-CCO53_RS08985;Dbxref=GenBank:WP_076726789.1;Name=WP_076726789.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO53_RS08985;product=Y-family DNA polymerase;protein_id=WP_076726789.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 158578 158997 . - . ID=gene-CCO53_RS08990;Name=CCO53_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS08990;old_locus_tag=CCO53_08980 NZ_NPLZ01000004.1 Protein Homology CDS 158578 158997 . - 0 ID=cds-WP_000394197.1;Parent=gene-CCO53_RS08990;Dbxref=GenBank:WP_000394197.1;Name=WP_000394197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=CCO53_RS08990;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000394197.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 159575 159664 . - . ID=gene-CCO53_RS09005;Name=CCO53_RS09005;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS09005;old_locus_tag=CCO53_08995 NZ_NPLZ01000004.1 tRNAscan-SE tRNA 159575 159664 . - . ID=rna-CCO53_RS09005;Parent=gene-CCO53_RS09005;anticodon=(pos:complement(159628..159630));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS09005;product=tRNA-Ser NZ_NPLZ01000004.1 tRNAscan-SE exon 159575 159664 . - . ID=exon-CCO53_RS09005-1;Parent=rna-CCO53_RS09005;anticodon=(pos:complement(159628..159630));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS09005;product=tRNA-Ser NZ_NPLZ01000004.1 RefSeq gene 159753 160550 . + . ID=gene-CCO53_RS09010;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=CCO53_RS09010;old_locus_tag=CCO53_09000 NZ_NPLZ01000004.1 Protein Homology CDS 159753 160550 . + 0 ID=cds-WP_000598920.1;Parent=gene-CCO53_RS09010;Dbxref=GenBank:WP_000598920.1;Name=WP_000598920.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=CCO53_RS09010;product=DgsA anti-repressor MtfA;protein_id=WP_000598920.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 160651 160726 . + . ID=gene-CCO53_RS09015;Name=CCO53_RS09015;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS09015;old_locus_tag=CCO53_09005 NZ_NPLZ01000004.1 tRNAscan-SE tRNA 160651 160726 . + . ID=rna-CCO53_RS09015;Parent=gene-CCO53_RS09015;anticodon=(pos:160684..160686);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS09015;product=tRNA-Asn NZ_NPLZ01000004.1 tRNAscan-SE exon 160651 160726 . + . ID=exon-CCO53_RS09015-1;Parent=rna-CCO53_RS09015;anticodon=(pos:160684..160686);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS09015;product=tRNA-Asn NZ_NPLZ01000004.1 RefSeq pseudogene 160894 161199 . + . ID=gene-CCO53_RS09020;Name=CCO53_RS09020;end_range=161199,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS09020;old_locus_tag=CCO53_09010;partial=true;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 160894 161199 . + 0 ID=cds-CCO53_RS09020;Parent=gene-CCO53_RS09020;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=161199,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=CCO53_RS09020;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 161621 161696 . + . ID=gene-CCO53_RS09025;Name=CCO53_RS09025;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS09025;old_locus_tag=CCO53_09015 NZ_NPLZ01000004.1 tRNAscan-SE tRNA 161621 161696 . + . ID=rna-CCO53_RS09025;Parent=gene-CCO53_RS09025;anticodon=(pos:161654..161656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS09025;product=tRNA-Asn NZ_NPLZ01000004.1 tRNAscan-SE exon 161621 161696 . + . ID=exon-CCO53_RS09025-1;Parent=rna-CCO53_RS09025;anticodon=(pos:161654..161656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS09025;product=tRNA-Asn NZ_NPLZ01000004.1 RefSeq gene 161876 163150 . + . ID=gene-CCO53_RS09030;Name=CCO53_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09030;old_locus_tag=CCO53_09020 NZ_NPLZ01000004.1 Protein Homology CDS 161876 163150 . + 0 ID=cds-WP_023251997.1;Parent=gene-CCO53_RS09030;Dbxref=GenBank:WP_023251997.1;Name=WP_023251997.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015730213.1;locus_tag=CCO53_RS09030;product=tyrosine-type recombinase/integrase;protein_id=WP_023251997.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 163217 165181 . + . ID=gene-CCO53_RS09035;Name=CCO53_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09035;old_locus_tag=CCO53_09025 NZ_NPLZ01000004.1 Protein Homology CDS 163217 165181 . + 0 ID=cds-WP_079949004.1;Parent=gene-CCO53_RS09035;Dbxref=GenBank:WP_079949004.1;Name=WP_079949004.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024977.6;locus_tag=CCO53_RS09035;product=ATP-binding protein;protein_id=WP_079949004.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 165403 166839 . - . ID=gene-CCO53_RS09040;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=CCO53_RS09040;old_locus_tag=CCO53_09030 NZ_NPLZ01000004.1 Protein Homology CDS 165403 166839 . - 0 ID=cds-WP_023251848.1;Parent=gene-CCO53_RS09040;Dbxref=GenBank:WP_023251848.1;Name=WP_023251848.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592082.1;locus_tag=CCO53_RS09040;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_023251848.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 166892 167449 . - . ID=gene-CCO53_RS09045;Name=bfpA;gbkey=Gene;gene=bfpA;gene_biotype=protein_coding;locus_tag=CCO53_RS09045;old_locus_tag=CCO53_09035 NZ_NPLZ01000004.1 Protein Homology CDS 166892 167449 . - 0 ID=cds-WP_023214922.1;Parent=gene-CCO53_RS09045;Dbxref=GenBank:WP_023214922.1;Name=WP_023214922.1;gbkey=CDS;gene=bfpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243508.1;locus_tag=CCO53_RS09045;product=type IV pilus major subunit protein BfpA;protein_id=WP_023214922.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 167852 168157 . - . ID=gene-CCO53_RS09050;Name=CCO53_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09050;old_locus_tag=CCO53_09040 NZ_NPLZ01000004.1 Protein Homology CDS 167852 168157 . - 0 ID=cds-WP_079949003.1;Parent=gene-CCO53_RS09050;Dbxref=GenBank:WP_079949003.1;Name=WP_079949003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368354.1;locus_tag=CCO53_RS09050;product=conjugal transfer protein TraD;protein_id=WP_079949003.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 168631 168768 . + . ID=gene-CCO53_RS23815;Name=CCO53_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23815 NZ_NPLZ01000004.1 Protein Homology CDS 168631 168768 . + 0 ID=cds-WP_176456003.1;Parent=gene-CCO53_RS23815;Dbxref=GenBank:WP_176456003.1;Name=WP_176456003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327273.1;locus_tag=CCO53_RS23815;product=hypothetical protein;protein_id=WP_176456003.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 168801 170291 . + . ID=gene-CCO53_RS09055;Name=mobQ;gbkey=Gene;gene=mobQ;gene_biotype=protein_coding;locus_tag=CCO53_RS09055;old_locus_tag=CCO53_09045 NZ_NPLZ01000004.1 Protein Homology CDS 168801 170291 . + 0 ID=cds-WP_094887641.1;Parent=gene-CCO53_RS09055;Dbxref=GenBank:WP_094887641.1;Name=WP_094887641.1;gbkey=CDS;gene=mobQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964100.1;locus_tag=CCO53_RS09055;product=MobQ family relaxase;protein_id=WP_094887641.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 170462 171442 . + . ID=gene-CCO53_RS09060;Name=CCO53_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09060;old_locus_tag=CCO53_09050 NZ_NPLZ01000004.1 Protein Homology CDS 170462 171442 . + 0 ID=cds-WP_125855786.1;Parent=gene-CCO53_RS09060;Dbxref=GenBank:WP_125855786.1;Name=WP_125855786.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037056.6;locus_tag=CCO53_RS09060;product=hypothetical protein;protein_id=WP_125855786.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 171572 171886 . - . ID=gene-CCO53_RS09065;Name=CCO53_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09065;old_locus_tag=CCO53_09055 NZ_NPLZ01000004.1 Protein Homology CDS 171572 171886 . - 0 ID=cds-WP_094887643.1;Parent=gene-CCO53_RS09065;Dbxref=GenBank:WP_094887643.1;Name=WP_094887643.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: protein motif:HMM:NF013691.6;locus_tag=CCO53_RS09065;product=GIY-YIG nuclease family protein;protein_id=WP_094887643.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 172036 172296 . - . ID=gene-CCO53_RS23985;Name=CCO53_RS23985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23985;old_locus_tag=CCO53_09060;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 172036 172296 . - 0 ID=cds-CCO53_RS23985;Parent=gene-CCO53_RS23985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192006.1;locus_tag=CCO53_RS23985;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 172308 172838 . - . ID=gene-CCO53_RS09075;Name=CCO53_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09075;old_locus_tag=CCO53_09065 NZ_NPLZ01000004.1 Protein Homology CDS 172308 172838 . - 0 ID=cds-WP_024145045.1;Parent=gene-CCO53_RS09075;Dbxref=GenBank:WP_024145045.1;Name=WP_024145045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=CCO53_RS09075;product=lipoprotein;protein_id=WP_024145045.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 173271 173744 . + . ID=gene-CCO53_RS09080;Name=CCO53_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09080;old_locus_tag=CCO53_09070 NZ_NPLZ01000004.1 Protein Homology CDS 173271 173744 . + 0 ID=cds-WP_079949000.1;Parent=gene-CCO53_RS09080;Dbxref=GenBank:WP_079949000.1;Name=WP_079949000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351134.1;locus_tag=CCO53_RS09080;product=DUF4755 domain-containing protein;protein_id=WP_079949000.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 173783 174160 . + . ID=gene-CCO53_RS09085;Name=CCO53_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09085;old_locus_tag=CCO53_09075 NZ_NPLZ01000004.1 Protein Homology CDS 173783 174160 . + 0 ID=cds-WP_079948999.1;Parent=gene-CCO53_RS09085;Dbxref=GenBank:WP_079948999.1;Name=WP_079948999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734570.1;locus_tag=CCO53_RS09085;product=hypothetical protein;protein_id=WP_079948999.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 174365 174865 . + . ID=gene-CCO53_RS09090;Name=CCO53_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09090;old_locus_tag=CCO53_09080 NZ_NPLZ01000004.1 Protein Homology CDS 174365 174865 . + 0 ID=cds-WP_079948998.1;Parent=gene-CCO53_RS09090;Dbxref=GenBank:WP_079948998.1;Name=WP_079948998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747609.1;locus_tag=CCO53_RS09090;product=hypothetical protein;protein_id=WP_079948998.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 174935 175537 . + . ID=gene-CCO53_RS23995;Name=CCO53_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23995 NZ_NPLZ01000004.1 Protein Homology CDS 174935 175537 . + 0 ID=cds-WP_237141192.1;Parent=gene-CCO53_RS23995;Dbxref=GenBank:WP_237141192.1;Name=WP_237141192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142575.1;locus_tag=CCO53_RS23995;product=hypothetical protein;protein_id=WP_237141192.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 177054 177761 . + . ID=gene-CCO53_RS09105;Name=CCO53_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09105;old_locus_tag=CCO53_09095 NZ_NPLZ01000004.1 Protein Homology CDS 177054 177761 . + 0 ID=cds-WP_023251517.1;Parent=gene-CCO53_RS09105;Dbxref=GenBank:WP_023251517.1;Name=WP_023251517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001588076.1;locus_tag=CCO53_RS09105;product=hypothetical protein;protein_id=WP_023251517.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 177849 178328 . + . ID=gene-CCO53_RS09110;Name=CCO53_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09110;old_locus_tag=CCO53_09100 NZ_NPLZ01000004.1 Protein Homology CDS 177849 178328 . + 0 ID=cds-WP_023251518.1;Parent=gene-CCO53_RS09110;Dbxref=GenBank:WP_023251518.1;Name=WP_023251518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233373.1;locus_tag=CCO53_RS09110;product=DUF4756 family protein;protein_id=WP_023251518.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 178489 178893 . + . ID=gene-CCO53_RS09115;Name=CCO53_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09115;old_locus_tag=CCO53_09105 NZ_NPLZ01000004.1 Protein Homology CDS 178489 178893 . + 0 ID=cds-WP_023251519.1;Parent=gene-CCO53_RS09115;Dbxref=GenBank:WP_023251519.1;Name=WP_023251519.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519859.1;locus_tag=CCO53_RS09115;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_023251519.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 179309 179857 . - . ID=gene-CCO53_RS09125;Name=CCO53_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09125;old_locus_tag=CCO53_09115 NZ_NPLZ01000004.1 Protein Homology CDS 179309 179857 . - 0 ID=cds-WP_023251520.1;Parent=gene-CCO53_RS09125;Dbxref=GenBank:WP_023251520.1;Name=WP_023251520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746429.1;locus_tag=CCO53_RS09125;product=SLATT domain-containing protein;protein_id=WP_023251520.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 179922 181193 . - . ID=gene-CCO53_RS09130;Name=CCO53_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09130;old_locus_tag=CCO53_09120 NZ_NPLZ01000004.1 Protein Homology CDS 179922 181193 . - 0 ID=cds-WP_079948997.1;Parent=gene-CCO53_RS09130;Dbxref=GenBank:WP_079948997.1;Name=WP_079948997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102011.1;locus_tag=CCO53_RS09130;product=SMODS domain-containing nucleotidyltransferase;protein_id=WP_079948997.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 181439 181735 . - . ID=gene-CCO53_RS09135;Name=CCO53_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09135;old_locus_tag=CCO53_09125 NZ_NPLZ01000004.1 Protein Homology CDS 181439 181735 . - 0 ID=cds-WP_094887644.1;Parent=gene-CCO53_RS09135;Dbxref=GenBank:WP_094887644.1;Name=WP_094887644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091325.1;locus_tag=CCO53_RS09135;product=hypothetical protein;protein_id=WP_094887644.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 181788 182078 . - . ID=gene-CCO53_RS09140;Name=CCO53_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09140;old_locus_tag=CCO53_09130 NZ_NPLZ01000004.1 Protein Homology CDS 181788 182078 . - 0 ID=cds-WP_079948995.1;Parent=gene-CCO53_RS09140;Dbxref=GenBank:WP_079948995.1;Name=WP_079948995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524933.1;locus_tag=CCO53_RS09140;product=hypothetical protein;protein_id=WP_079948995.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 182160 182378 . - . ID=gene-CCO53_RS09145;Name=CCO53_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09145;old_locus_tag=CCO53_09135 NZ_NPLZ01000004.1 Protein Homology CDS 182160 182378 . - 0 ID=cds-WP_000240779.1;Parent=gene-CCO53_RS09145;Dbxref=GenBank:WP_000240779.1;Name=WP_000240779.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240778.1;locus_tag=CCO53_RS09145;product=helix-turn-helix transcriptional regulator;protein_id=WP_000240779.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 182529 183404 . - . ID=gene-CCO53_RS09150;Name=CCO53_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09150;old_locus_tag=CCO53_09140 NZ_NPLZ01000004.1 Protein Homology CDS 182529 183404 . - 0 ID=cds-WP_023252009.1;Parent=gene-CCO53_RS09150;Dbxref=GenBank:WP_023252009.1;Name=WP_023252009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166882.1;locus_tag=CCO53_RS09150;product=DUF6387 family protein;protein_id=WP_023252009.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 183947 184228 . + . ID=gene-CCO53_RS24240;Name=CCO53_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24240 NZ_NPLZ01000004.1 Protein Homology CDS 183947 184228 . + 0 ID=cds-WP_001219035.1;Parent=gene-CCO53_RS24240;Dbxref=GenBank:WP_001219035.1;Name=WP_001219035.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835997.1;locus_tag=CCO53_RS24240;product=Arm DNA-binding domain-containing protein;protein_id=WP_001219035.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 184546 184887 . - . ID=gene-CCO53_RS09170;Name=CCO53_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09170;old_locus_tag=CCO53_09160 NZ_NPLZ01000004.1 Protein Homology CDS 184546 184887 . - 0 ID=cds-WP_023137514.1;Parent=gene-CCO53_RS09170;Dbxref=GenBank:WP_023137514.1;Name=WP_023137514.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000967787.1;locus_tag=CCO53_RS09170;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_023137514.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 185002 185559 . + . ID=gene-CCO53_RS09175;Name=CCO53_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09175;old_locus_tag=CCO53_09165 NZ_NPLZ01000004.1 Protein Homology CDS 185002 185559 . + 0 ID=cds-WP_023201872.1;Parent=gene-CCO53_RS09175;Dbxref=GenBank:WP_023201872.1;Name=WP_023201872.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751883.1;locus_tag=CCO53_RS09175;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_023201872.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 186125 186223 . + . ID=gene-CCO53_RS24005;Name=CCO53_RS24005;end_range=186223,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24005;partial=true;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 186125 186223 . + 0 ID=cds-CCO53_RS24005;Parent=gene-CCO53_RS24005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=186223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000059623.1;locus_tag=CCO53_RS24005;partial=true;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 186466 187920 . - . ID=gene-CCO53_RS09185;Name=CCO53_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09185;old_locus_tag=CCO53_09175 NZ_NPLZ01000004.1 Protein Homology CDS 186466 187920 . - 0 ID=cds-WP_076935361.1;Parent=gene-CCO53_RS09185;Dbxref=GenBank:WP_076935361.1;Name=WP_076935361.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=CCO53_RS09185;product=AMP nucleosidase;protein_id=WP_076935361.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 187966 188126 . + . ID=gene-CCO53_RS09190;Name=CCO53_RS09190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS09190;old_locus_tag=CCO53_09180;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 187966 188126 . + 0 ID=cds-CCO53_RS09190;Parent=gene-CCO53_RS09190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=CCO53_RS09190;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 188115 188441 . - . ID=gene-CCO53_RS09195;Name=CCO53_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09195;old_locus_tag=CCO53_09185 NZ_NPLZ01000004.1 Protein Homology CDS 188115 188441 . - 0 ID=cds-WP_000228159.1;Parent=gene-CCO53_RS09195;Dbxref=GenBank:WP_000228159.1;Name=WP_000228159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=CCO53_RS09195;product=DUF1493 family protein;protein_id=WP_000228159.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 188435 188899 . - . ID=gene-CCO53_RS09200;Name=CCO53_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09200;old_locus_tag=CCO53_09190 NZ_NPLZ01000004.1 Protein Homology CDS 188435 188899 . - 0 ID=cds-WP_094887645.1;Parent=gene-CCO53_RS09200;Dbxref=GenBank:WP_094887645.1;Name=WP_094887645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=CCO53_RS09200;product=STM2901 family protein;protein_id=WP_094887645.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 189321 189396 . - . ID=gene-CCO53_RS09210;Name=CCO53_RS09210;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS09210;old_locus_tag=CCO53_09200 NZ_NPLZ01000004.1 tRNAscan-SE tRNA 189321 189396 . - . ID=rna-CCO53_RS09210;Parent=gene-CCO53_RS09210;anticodon=(pos:complement(189361..189363));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS09210;product=tRNA-Asn NZ_NPLZ01000004.1 tRNAscan-SE exon 189321 189396 . - . ID=exon-CCO53_RS09210-1;Parent=rna-CCO53_RS09210;anticodon=(pos:complement(189361..189363));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS09210;product=tRNA-Asn NZ_NPLZ01000004.1 RefSeq gene 189537 190994 . - . ID=gene-CCO53_RS09215;Name=CCO53_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09215;old_locus_tag=CCO53_09205 NZ_NPLZ01000004.1 Protein Homology CDS 189537 190994 . - 0 ID=cds-WP_001538409.1;Parent=gene-CCO53_RS09215;Dbxref=GenBank:WP_001538409.1;Name=WP_001538409.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=CCO53_RS09215;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_001538409.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 191154 191229 . + . ID=gene-CCO53_RS09220;Name=CCO53_RS09220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS09220;old_locus_tag=CCO53_09210 NZ_NPLZ01000004.1 tRNAscan-SE tRNA 191154 191229 . + . ID=rna-CCO53_RS09220;Parent=gene-CCO53_RS09220;anticodon=(pos:191187..191189);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS09220;product=tRNA-Asn NZ_NPLZ01000004.1 tRNAscan-SE exon 191154 191229 . + . ID=exon-CCO53_RS09220-1;Parent=rna-CCO53_RS09220;anticodon=(pos:191187..191189);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS09220;product=tRNA-Asn NZ_NPLZ01000004.1 RefSeq gene 191454 192383 . - . ID=gene-CCO53_RS09225;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=CCO53_RS09225;old_locus_tag=CCO53_09215 NZ_NPLZ01000004.1 Protein Homology CDS 191454 192383 . - 0 ID=cds-WP_001252817.1;Parent=gene-CCO53_RS09225;Dbxref=GenBank:WP_001252817.1;Name=WP_001252817.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=CCO53_RS09225;product=L%2CD-transpeptidase;protein_id=WP_001252817.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 192461 193531 . - . ID=gene-CCO53_RS09230;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CCO53_RS09230;old_locus_tag=CCO53_09220 NZ_NPLZ01000004.1 Protein Homology CDS 192461 193531 . - 0 ID=cds-WP_001193978.1;Parent=gene-CCO53_RS09230;Dbxref=GenBank:WP_001193978.1;Name=WP_001193978.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=CCO53_RS09230;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193978.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 193558 194301 . - . ID=gene-CCO53_RS09235;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=CCO53_RS09235;old_locus_tag=CCO53_09225 NZ_NPLZ01000004.1 Protein Homology CDS 193558 194301 . - 0 ID=cds-WP_001808088.1;Parent=gene-CCO53_RS09235;Dbxref=GenBank:WP_001808088.1;Name=WP_001808088.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=CCO53_RS09235;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_001808088.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 194298 194843 . - . ID=gene-CCO53_RS09240;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=CCO53_RS09240;old_locus_tag=CCO53_09230 NZ_NPLZ01000004.1 Protein Homology CDS 194298 194843 . - 0 ID=cds-WP_000973145.1;Parent=gene-CCO53_RS09240;Dbxref=GenBank:WP_000973145.1;Name=WP_000973145.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=CCO53_RS09240;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973145.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 194840 196360 . - . ID=gene-CCO53_RS09245;Name=CCO53_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09245;old_locus_tag=CCO53_09235 NZ_NPLZ01000004.1 Protein Homology CDS 194840 196360 . - 0 ID=cds-WP_023137988.1;Parent=gene-CCO53_RS09245;Dbxref=GenBank:WP_023137988.1;Name=WP_023137988.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=CCO53_RS09245;product=cobyric acid synthase;protein_id=WP_023137988.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 196357 197172 . - . ID=gene-CCO53_RS09250;Name=CCO53_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09250;old_locus_tag=CCO53_09240 NZ_NPLZ01000004.1 Protein Homology CDS 196357 197172 . - 0 ID=cds-WP_000881542.1;Parent=gene-CCO53_RS09250;Dbxref=GenBank:WP_000881542.1;Name=WP_000881542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=CCO53_RS09250;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881542.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 197181 197858 . - . ID=gene-CCO53_RS09255;Name=CCO53_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09255;old_locus_tag=CCO53_09245 NZ_NPLZ01000004.1 Protein Homology CDS 197181 197858 . - 0 ID=cds-WP_058331794.1;Parent=gene-CCO53_RS09255;Dbxref=GenBank:WP_058331794.1;Name=WP_058331794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=CCO53_RS09255;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_058331794.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 197845 198126 . - . ID=gene-CCO53_RS09260;Name=CCO53_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09260;old_locus_tag=CCO53_09250 NZ_NPLZ01000004.1 Protein Homology CDS 197845 198126 . - 0 ID=cds-WP_000753214.1;Parent=gene-CCO53_RS09260;Dbxref=GenBank:WP_000753214.1;Name=WP_000753214.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=CCO53_RS09260;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753214.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 198128 198865 . - . ID=gene-CCO53_RS09265;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=CCO53_RS09265;old_locus_tag=CCO53_09255 NZ_NPLZ01000004.1 Protein Homology CDS 198128 198865 . - 0 ID=cds-WP_000764336.1;Parent=gene-CCO53_RS09265;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=CCO53_RS09265;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 198862 199575 . - . ID=gene-CCO53_RS09270;Name=CCO53_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09270;old_locus_tag=CCO53_09260 NZ_NPLZ01000004.1 Protein Homology CDS 198862 199575 . - 0 ID=cds-WP_001013550.1;Parent=gene-CCO53_RS09270;Dbxref=GenBank:WP_001013550.1;Name=WP_001013550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=CCO53_RS09270;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013550.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 199572 200366 . - . ID=gene-CCO53_RS09275;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=CCO53_RS09275;old_locus_tag=CCO53_09265 NZ_NPLZ01000004.1 Protein Homology CDS 199572 200366 . - 0 ID=cds-WP_000709784.1;Parent=gene-CCO53_RS09275;Dbxref=GenBank:WP_000709784.1;Name=WP_000709784.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=CCO53_RS09275;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709784.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 200369 201160 . - . ID=gene-CCO53_RS09280;Name=CCO53_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09280;old_locus_tag=CCO53_09270 NZ_NPLZ01000004.1 Protein Homology CDS 200369 201160 . - 0 ID=cds-WP_001001975.1;Parent=gene-CCO53_RS09280;Dbxref=GenBank:WP_001001975.1;Name=WP_001001975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=CCO53_RS09280;product=cobalt-precorrin-6A reductase;protein_id=WP_001001975.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 201157 201882 . - . ID=gene-CCO53_RS09285;Name=CCO53_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09285;old_locus_tag=CCO53_09275 NZ_NPLZ01000004.1 Protein Homology CDS 201157 201882 . - 0 ID=cds-WP_058331795.1;Parent=gene-CCO53_RS09285;Dbxref=GenBank:WP_058331795.1;Name=WP_058331795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=CCO53_RS09285;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_058331795.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 201882 202937 . - . ID=gene-CCO53_RS09290;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=CCO53_RS09290;old_locus_tag=CCO53_09280 NZ_NPLZ01000004.1 Protein Homology CDS 201882 202937 . - 0 ID=cds-WP_001098914.1;Parent=gene-CCO53_RS09290;Dbxref=GenBank:WP_001098914.1;Name=WP_001098914.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=CCO53_RS09290;product=cobalt-precorrin 5A hydrolase;protein_id=WP_001098914.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 202918 203691 . - . ID=gene-CCO53_RS09295;Name=CCO53_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09295;old_locus_tag=CCO53_09285 NZ_NPLZ01000004.1 Protein Homology CDS 202918 203691 . - 0 ID=cds-WP_023219321.1;Parent=gene-CCO53_RS09295;Dbxref=GenBank:WP_023219321.1;Name=WP_023219321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=CCO53_RS09295;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_023219321.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 203675 204253 . - . ID=gene-CCO53_RS09300;Name=CCO53_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09300;old_locus_tag=CCO53_09290 NZ_NPLZ01000004.1 Protein Homology CDS 203675 204253 . - 0 ID=cds-WP_000650989.1;Parent=gene-CCO53_RS09300;Dbxref=GenBank:WP_000650989.1;Name=WP_000650989.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=CCO53_RS09300;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650989.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 204243 204848 . - . ID=gene-CCO53_RS09305;Name=CCO53_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09305;old_locus_tag=CCO53_09295 NZ_NPLZ01000004.1 Protein Homology CDS 204243 204848 . - 0 ID=cds-WP_000958841.1;Parent=gene-CCO53_RS09305;Dbxref=GenBank:WP_000958841.1;Name=WP_000958841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=CCO53_RS09305;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958841.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 204842 205981 . - . ID=gene-CCO53_RS09310;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=CCO53_RS09310;old_locus_tag=CCO53_09300 NZ_NPLZ01000004.1 Protein Homology CDS 204842 205981 . - 0 ID=cds-WP_000504294.1;Parent=gene-CCO53_RS09310;Dbxref=GenBank:WP_000504294.1;Name=WP_000504294.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=CCO53_RS09310;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_000504294.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 205981 206613 . - . ID=gene-CCO53_RS09315;Name=CCO53_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09315;old_locus_tag=CCO53_09305 NZ_NPLZ01000004.1 Protein Homology CDS 205981 206613 . - 0 ID=cds-WP_000558995.1;Parent=gene-CCO53_RS09315;Dbxref=GenBank:WP_000558995.1;Name=WP_000558995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=CCO53_RS09315;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558995.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 206624 207583 . - . ID=gene-CCO53_RS09320;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=CCO53_RS09320;old_locus_tag=CCO53_09310 NZ_NPLZ01000004.1 Protein Homology CDS 206624 207583 . - 0 ID=cds-WP_000153644.1;Parent=gene-CCO53_RS09320;Dbxref=GenBank:WP_000153644.1;Name=WP_000153644.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=CCO53_RS09320;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153644.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 207580 208959 . - . ID=gene-CCO53_RS09325;Name=CCO53_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09325;old_locus_tag=CCO53_09315 NZ_NPLZ01000004.1 Protein Homology CDS 207580 208959 . - 0 ID=cds-WP_000741257.1;Parent=gene-CCO53_RS09325;Dbxref=GenBank:WP_000741257.1;Name=WP_000741257.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=CCO53_RS09325;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_000741257.1;transl_table=11 NZ_NPLZ01000004.1 cmsearch riboswitch 209057 209231 . - . ID=id-NZ_NPLZ01000004.1:209057..209231;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPLZ01000004.1 RefSeq gene 209557 210468 . - . ID=gene-CCO53_RS09330;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=CCO53_RS09330;old_locus_tag=CCO53_09320 NZ_NPLZ01000004.1 Protein Homology CDS 209557 210468 . - 0 ID=cds-WP_000622326.1;Parent=gene-CCO53_RS09330;Dbxref=GenBank:WP_000622326.1;Name=WP_000622326.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=CCO53_RS09330;product=transcriptional regulator PocR;protein_id=WP_000622326.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 210685 211479 . - . ID=gene-CCO53_RS09335;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=CCO53_RS09335;old_locus_tag=CCO53_09325 NZ_NPLZ01000004.1 Protein Homology CDS 210685 211479 . - 0 ID=cds-WP_001000023.1;Parent=gene-CCO53_RS09335;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=CCO53_RS09335;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 212004 212288 . + . ID=gene-CCO53_RS09340;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=CCO53_RS09340;old_locus_tag=CCO53_09330 NZ_NPLZ01000004.1 Protein Homology CDS 212004 212288 . + 0 ID=cds-WP_001183618.1;Parent=gene-CCO53_RS09340;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=CCO53_RS09340;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 212285 213097 . + . ID=gene-CCO53_RS09345;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=CCO53_RS09345;old_locus_tag=CCO53_09335 NZ_NPLZ01000004.1 Protein Homology CDS 212285 213097 . + 0 ID=cds-WP_000097500.1;Parent=gene-CCO53_RS09345;Dbxref=GenBank:WP_000097500.1;Name=WP_000097500.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=CCO53_RS09345;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097500.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 213116 214780 . + . ID=gene-CCO53_RS09350;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=CCO53_RS09350;old_locus_tag=CCO53_09340 NZ_NPLZ01000004.1 Protein Homology CDS 213116 214780 . + 0 ID=cds-WP_001256896.1;Parent=gene-CCO53_RS09350;Dbxref=GenBank:WP_001256896.1;Name=WP_001256896.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=CCO53_RS09350;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256896.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 214791 215465 . + . ID=gene-CCO53_RS09355;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=CCO53_RS09355;old_locus_tag=CCO53_09345 NZ_NPLZ01000004.1 Protein Homology CDS 214791 215465 . + 0 ID=cds-WP_000405048.1;Parent=gene-CCO53_RS09355;Dbxref=GenBank:WP_000405048.1;Name=WP_000405048.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=CCO53_RS09355;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405048.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 215480 216001 . + . ID=gene-CCO53_RS09360;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=CCO53_RS09360;old_locus_tag=CCO53_09350 NZ_NPLZ01000004.1 Protein Homology CDS 215480 216001 . + 0 ID=cds-WP_058331798.1;Parent=gene-CCO53_RS09360;Dbxref=GenBank:WP_058331798.1;Name=WP_058331798.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=CCO53_RS09360;product=propanediol dehydratase small subunit PduE;protein_id=WP_058331798.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 216208 218040 . + . ID=gene-CCO53_RS09365;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=CCO53_RS09365;old_locus_tag=CCO53_09355 NZ_NPLZ01000004.1 Protein Homology CDS 216208 218040 . + 0 ID=cds-WP_023202810.1;Parent=gene-CCO53_RS09365;Dbxref=GenBank:WP_023202810.1;Name=WP_023202810.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=CCO53_RS09365;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_023202810.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 218030 218380 . + . ID=gene-CCO53_RS09370;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=CCO53_RS09370;old_locus_tag=CCO53_09360 NZ_NPLZ01000004.1 Protein Homology CDS 218030 218380 . + 0 ID=cds-WP_000377974.1;Parent=gene-CCO53_RS09370;Dbxref=GenBank:WP_000377974.1;Name=WP_000377974.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=CCO53_RS09370;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377974.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 218399 218674 . + . ID=gene-CCO53_RS09375;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=CCO53_RS09375;old_locus_tag=CCO53_09365 NZ_NPLZ01000004.1 Protein Homology CDS 218399 218674 . + 0 ID=cds-WP_001057755.1;Parent=gene-CCO53_RS09375;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=CCO53_RS09375;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 218678 219160 . + . ID=gene-CCO53_RS09380;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=CCO53_RS09380;old_locus_tag=CCO53_09370 NZ_NPLZ01000004.1 Protein Homology CDS 218678 219160 . + 0 ID=cds-WP_080094846.1;Parent=gene-CCO53_RS09380;Dbxref=GenBank:WP_080094846.1;Name=WP_080094846.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=CCO53_RS09380;product=propanediol utilization microcompartment protein PduK;protein_id=WP_080094846.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 219160 219792 . + . ID=gene-CCO53_RS09385;Name=CCO53_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09385;old_locus_tag=CCO53_09375 NZ_NPLZ01000004.1 Protein Homology CDS 219160 219792 . + 0 ID=cds-WP_000356726.1;Parent=gene-CCO53_RS09385;Dbxref=GenBank:WP_000356726.1;Name=WP_000356726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=CCO53_RS09385;product=phosphate propanoyltransferase;protein_id=WP_000356726.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 219789 220280 . + . ID=gene-CCO53_RS09390;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=CCO53_RS09390;old_locus_tag=CCO53_09380 NZ_NPLZ01000004.1 Protein Homology CDS 219789 220280 . + 0 ID=cds-WP_001012965.1;Parent=gene-CCO53_RS09390;Dbxref=GenBank:WP_001012965.1;Name=WP_001012965.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=CCO53_RS09390;product=propanediol utilization microcompartment protein PduM;protein_id=WP_001012965.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 220284 220559 . + . ID=gene-CCO53_RS09395;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=CCO53_RS09395;old_locus_tag=CCO53_09385 NZ_NPLZ01000004.1 Protein Homology CDS 220284 220559 . + 0 ID=cds-WP_000549825.1;Parent=gene-CCO53_RS09395;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=CCO53_RS09395;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 220569 221579 . + . ID=gene-CCO53_RS09400;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=CCO53_RS09400;old_locus_tag=CCO53_09390 NZ_NPLZ01000004.1 Protein Homology CDS 220569 221579 . + 0 ID=cds-WP_058331800.1;Parent=gene-CCO53_RS09400;Dbxref=GenBank:WP_058331800.1;Name=WP_058331800.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=CCO53_RS09400;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_058331800.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 221576 222970 . + . ID=gene-CCO53_RS09405;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=CCO53_RS09405;old_locus_tag=CCO53_09395 NZ_NPLZ01000004.1 Protein Homology CDS 221576 222970 . + 0 ID=cds-WP_001097668.1;Parent=gene-CCO53_RS09405;Dbxref=GenBank:WP_001097668.1;Name=WP_001097668.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=CCO53_RS09405;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_001097668.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 222982 224094 . + . ID=gene-CCO53_RS09410;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=CCO53_RS09410;old_locus_tag=CCO53_09400 NZ_NPLZ01000004.1 Protein Homology CDS 222982 224094 . + 0 ID=cds-WP_080108777.1;Parent=gene-CCO53_RS09410;Dbxref=GenBank:WP_080108777.1;Name=WP_080108777.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=CCO53_RS09410;product=1-propanol dehydrogenase PduQ;protein_id=WP_080108777.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 224091 225446 . + . ID=gene-CCO53_RS09415;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=CCO53_RS09415;old_locus_tag=CCO53_09405 NZ_NPLZ01000004.1 Protein Homology CDS 224091 225446 . + 0 ID=cds-WP_058331801.1;Parent=gene-CCO53_RS09415;Dbxref=GenBank:WP_058331801.1;Name=WP_058331801.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=CCO53_RS09415;product=cobalamin reductase PduS;protein_id=WP_058331801.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 225449 226003 . + . ID=gene-CCO53_RS09420;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=CCO53_RS09420;old_locus_tag=CCO53_09410 NZ_NPLZ01000004.1 Protein Homology CDS 225449 226003 . + 0 ID=cds-WP_000075777.1;Parent=gene-CCO53_RS09420;Dbxref=GenBank:WP_000075777.1;Name=WP_000075777.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=CCO53_RS09420;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075777.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 226003 226353 . + . ID=gene-CCO53_RS09425;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=CCO53_RS09425;old_locus_tag=CCO53_09415 NZ_NPLZ01000004.1 Protein Homology CDS 226003 226353 . + 0 ID=cds-WP_000441103.1;Parent=gene-CCO53_RS09425;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=CCO53_RS09425;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 226358 226810 . + . ID=gene-CCO53_RS09430;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=CCO53_RS09430;old_locus_tag=CCO53_09420 NZ_NPLZ01000004.1 Protein Homology CDS 226358 226810 . + 0 ID=cds-WP_058331802.1;Parent=gene-CCO53_RS09430;Dbxref=GenBank:WP_058331802.1;Name=WP_058331802.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=CCO53_RS09430;product=propanediol utilization protein PduV;protein_id=WP_058331802.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 226795 228009 . + . ID=gene-CCO53_RS09435;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=CCO53_RS09435;old_locus_tag=CCO53_09425 NZ_NPLZ01000004.1 Protein Homology CDS 226795 228009 . + 0 ID=cds-WP_000120647.1;Parent=gene-CCO53_RS09435;Dbxref=GenBank:WP_000120647.1;Name=WP_000120647.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=CCO53_RS09435;product=propanediol utilization propionate kinase PduW;protein_id=WP_000120647.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 228103 228969 . + . ID=gene-CCO53_RS09440;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=CCO53_RS09440;old_locus_tag=CCO53_09430 NZ_NPLZ01000004.1 Protein Homology CDS 228103 228969 . + 0 ID=cds-WP_001533066.1;Parent=gene-CCO53_RS09440;Dbxref=GenBank:WP_001533066.1;Name=WP_001533066.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=CCO53_RS09440;product=L-threonine kinase PduX;protein_id=WP_001533066.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 229003 229338 . - . ID=gene-CCO53_RS09445;Name=CCO53_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09445;old_locus_tag=CCO53_09435 NZ_NPLZ01000004.1 Protein Homology CDS 229003 229338 . - 0 ID=cds-WP_000450405.1;Parent=gene-CCO53_RS09445;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=CCO53_RS09445;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 229583 230641 . - . ID=gene-CCO53_RS09450;Name=CCO53_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09450;old_locus_tag=CCO53_09440 NZ_NPLZ01000004.1 Protein Homology CDS 229583 230641 . - 0 ID=cds-WP_001200858.1;Parent=gene-CCO53_RS09450;Dbxref=GenBank:WP_001200858.1;Name=WP_001200858.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=CCO53_RS09450;product=FUSC family protein;protein_id=WP_001200858.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 230760 231227 . - . ID=gene-CCO53_RS09460;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=CCO53_RS09460;old_locus_tag=CCO53_09450 NZ_NPLZ01000004.1 Protein Homology CDS 230760 231227 . - 0 ID=cds-WP_000384326.1;Parent=gene-CCO53_RS09460;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=CCO53_RS09460;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 231378 232550 . - . ID=gene-CCO53_RS09465;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=CCO53_RS09465;old_locus_tag=CCO53_09455 NZ_NPLZ01000004.1 Protein Homology CDS 231378 232550 . - 0 ID=cds-WP_058331803.1;Parent=gene-CCO53_RS09465;Dbxref=GenBank:WP_058331803.1;Name=WP_058331803.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=CCO53_RS09465;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_058331803.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 232674 233438 . - . ID=gene-CCO53_RS09470;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=CCO53_RS09470;old_locus_tag=CCO53_09460 NZ_NPLZ01000004.1 Protein Homology CDS 232674 233438 . - 0 ID=cds-WP_001092553.1;Parent=gene-CCO53_RS09470;Dbxref=GenBank:WP_001092553.1;Name=WP_001092553.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=CCO53_RS09470;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092553.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 233435 234013 . - . ID=gene-CCO53_RS09475;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=CCO53_RS09475;old_locus_tag=CCO53_09465 NZ_NPLZ01000004.1 Protein Homology CDS 233435 234013 . - 0 ID=cds-WP_001016236.1;Parent=gene-CCO53_RS09475;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=CCO53_RS09475;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 234028 236304 . - . ID=gene-CCO53_RS09480;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=CCO53_RS09480;old_locus_tag=CCO53_09470 NZ_NPLZ01000004.1 Protein Homology CDS 234028 236304 . - 0 ID=cds-WP_094887646.1;Parent=gene-CCO53_RS09480;Dbxref=GenBank:WP_094887646.1;Name=WP_094887646.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=CCO53_RS09480;product=thiosulfate reductase PhsA;protein_id=WP_094887646.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 236707 238131 . + . ID=gene-CCO53_RS09485;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=CCO53_RS09485;old_locus_tag=CCO53_09475 NZ_NPLZ01000004.1 Protein Homology CDS 236707 238131 . + 0 ID=cds-WP_058331804.1;Parent=gene-CCO53_RS09485;Dbxref=GenBank:WP_058331804.1;Name=WP_058331804.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001354749.1;locus_tag=CCO53_RS09485;product=exodeoxyribonuclease I;protein_id=WP_058331804.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 238267 239625 . - . ID=gene-CCO53_RS09490;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=CCO53_RS09490;old_locus_tag=CCO53_09480 NZ_NPLZ01000004.1 Protein Homology CDS 238267 239625 . - 0 ID=cds-WP_001519005.1;Parent=gene-CCO53_RS09490;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=CCO53_RS09490;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 239615 239677 . - . ID=gene-CCO53_RS23650;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=CCO53_RS23650 NZ_NPLZ01000004.1 Protein Homology CDS 239615 239677 . - 0 ID=cds-WP_096335044.1;Parent=gene-CCO53_RS23650;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=CCO53_RS23650;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 239911 240825 . - . ID=gene-CCO53_RS09495;Name=CCO53_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09495;old_locus_tag=CCO53_09485 NZ_NPLZ01000004.1 Protein Homology CDS 239911 240825 . - 0 ID=cds-WP_000803316.1;Parent=gene-CCO53_RS09495;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=CCO53_RS09495;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 240871 241695 . - . ID=gene-CCO53_RS09500;Name=CCO53_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09500;old_locus_tag=CCO53_09490 NZ_NPLZ01000004.1 Protein Homology CDS 240871 241695 . - 0 ID=cds-WP_000754712.1;Parent=gene-CCO53_RS09500;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=CCO53_RS09500;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 241858 241908 . + . ID=gene-CCO53_RS09505;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=CCO53_RS09505;old_locus_tag=CCO53_09495 NZ_NPLZ01000004.1 Protein Homology CDS 241858 241908 . + 0 ID=cds-WP_001364200.1;Parent=gene-CCO53_RS09505;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=CCO53_RS09505;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_NPLZ01000004.1 cmsearch sequence_feature 241884 242007 . + . ID=id-NZ_NPLZ01000004.1:241884..242007;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPLZ01000004.1 RefSeq gene 242054 242953 . + . ID=gene-CCO53_RS09510;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CCO53_RS09510;old_locus_tag=CCO53_09500 NZ_NPLZ01000004.1 Protein Homology CDS 242054 242953 . + 0 ID=cds-WP_000886600.1;Parent=gene-CCO53_RS09510;Dbxref=GenBank:WP_000886600.1;Name=WP_000886600.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=CCO53_RS09510;product=ATP phosphoribosyltransferase;protein_id=WP_000886600.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 243056 244360 . + . ID=gene-CCO53_RS09515;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CCO53_RS09515;old_locus_tag=CCO53_09505 NZ_NPLZ01000004.1 Protein Homology CDS 243056 244360 . + 0 ID=cds-WP_000009622.1;Parent=gene-CCO53_RS09515;Dbxref=GenBank:WP_000009622.1;Name=WP_000009622.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=CCO53_RS09515;product=histidinol dehydrogenase;protein_id=WP_000009622.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 244357 245436 . + . ID=gene-CCO53_RS09520;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CCO53_RS09520;old_locus_tag=CCO53_09510 NZ_NPLZ01000004.1 Protein Homology CDS 244357 245436 . + 0 ID=cds-WP_000102707.1;Parent=gene-CCO53_RS09520;Dbxref=GenBank:WP_000102707.1;Name=WP_000102707.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=CCO53_RS09520;product=histidinol-phosphate transaminase;protein_id=WP_000102707.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 245433 246500 . + . ID=gene-CCO53_RS09525;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CCO53_RS09525;old_locus_tag=CCO53_09515 NZ_NPLZ01000004.1 Protein Homology CDS 245433 246500 . + 0 ID=cds-WP_020898967.1;Parent=gene-CCO53_RS09525;Dbxref=GenBank:WP_020898967.1;Name=WP_020898967.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=CCO53_RS09525;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_020898967.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 246500 247090 . + . ID=gene-CCO53_RS09530;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CCO53_RS09530;old_locus_tag=CCO53_09520 NZ_NPLZ01000004.1 Protein Homology CDS 246500 247090 . + 0 ID=cds-WP_064034867.1;Parent=gene-CCO53_RS09530;Dbxref=GenBank:WP_064034867.1;Name=WP_064034867.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=CCO53_RS09530;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_064034867.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 247090 247827 . + . ID=gene-CCO53_RS09535;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CCO53_RS09535;old_locus_tag=CCO53_09525 NZ_NPLZ01000004.1 Protein Homology CDS 247090 247827 . + 0 ID=cds-WP_001528470.1;Parent=gene-CCO53_RS09535;Dbxref=GenBank:WP_001528470.1;Name=WP_001528470.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=CCO53_RS09535;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_001528470.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 247809 248585 . + . ID=gene-CCO53_RS09540;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CCO53_RS09540;old_locus_tag=CCO53_09530 NZ_NPLZ01000004.1 Protein Homology CDS 247809 248585 . + 0 ID=cds-WP_000880125.1;Parent=gene-CCO53_RS09540;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=CCO53_RS09540;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 248579 249190 . + . ID=gene-CCO53_RS09545;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CCO53_RS09545;old_locus_tag=CCO53_09535 NZ_NPLZ01000004.1 Protein Homology CDS 248579 249190 . + 0 ID=cds-WP_000954847.1;Parent=gene-CCO53_RS09545;Dbxref=GenBank:WP_000954847.1;Name=WP_000954847.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=CCO53_RS09545;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954847.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 249271 250254 . - . ID=gene-CCO53_RS09550;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=CCO53_RS09550;old_locus_tag=CCO53_09540 NZ_NPLZ01000004.1 Protein Homology CDS 249271 250254 . - 0 ID=cds-WP_080160516.1;Parent=gene-CCO53_RS09550;Dbxref=GenBank:WP_080160516.1;Name=WP_080160516.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=CCO53_RS09550;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_080160516.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 250397 251563 . - . ID=gene-CCO53_RS09555;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=CCO53_RS09555;old_locus_tag=CCO53_09545 NZ_NPLZ01000004.1 Protein Homology CDS 250397 251563 . - 0 ID=cds-WP_000704825.1;Parent=gene-CCO53_RS09555;Dbxref=GenBank:WP_000704825.1;Name=WP_000704825.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=CCO53_RS09555;product=UDP-glucose 6-dehydrogenase;protein_id=WP_000704825.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 251799 253205 . - . ID=gene-CCO53_RS09565;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=CCO53_RS09565;old_locus_tag=CCO53_09555 NZ_NPLZ01000004.1 Protein Homology CDS 251799 253205 . - 0 ID=cds-WP_000043533.1;Parent=gene-CCO53_RS09565;Dbxref=GenBank:WP_000043533.1;Name=WP_000043533.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=CCO53_RS09565;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043533.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 253369 254799 . - . ID=gene-CCO53_RS09570;Name=CCO53_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09570;old_locus_tag=CCO53_09560 NZ_NPLZ01000004.1 Protein Homology CDS 253369 254799 . - 0 ID=cds-WP_080160515.1;Parent=gene-CCO53_RS09570;Dbxref=GenBank:WP_080160515.1;Name=WP_080160515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=CCO53_RS09570;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WP_080160515.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 254871 256304 . - . ID=gene-CCO53_RS09575;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=CCO53_RS09575;old_locus_tag=CCO53_09565 NZ_NPLZ01000004.1 Protein Homology CDS 254871 256304 . - 0 ID=cds-WP_001103645.1;Parent=gene-CCO53_RS09575;Dbxref=GenBank:WP_001103645.1;Name=WP_001103645.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103634.1;locus_tag=CCO53_RS09575;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WP_001103645.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 256291 257730 . - . ID=gene-CCO53_RS09580;Name=CCO53_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09580;old_locus_tag=CCO53_09570 NZ_NPLZ01000004.1 Protein Homology CDS 256291 257730 . - 0 ID=cds-WP_058331807.1;Parent=gene-CCO53_RS09580;Dbxref=GenBank:WP_058331807.1;Name=WP_058331807.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=CCO53_RS09580;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_058331807.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 257731 258678 . - . ID=gene-CCO53_RS09585;Name=CCO53_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09585;old_locus_tag=CCO53_09575 NZ_NPLZ01000004.1 Protein Homology CDS 257731 258678 . - 0 ID=cds-WP_001138992.1;Parent=gene-CCO53_RS09585;Dbxref=GenBank:WP_001138992.1;Name=WP_001138992.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138993.1;locus_tag=CCO53_RS09585;product=glycosyltransferase family 2 protein;protein_id=WP_001138992.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 258682 259752 . - . ID=gene-CCO53_RS09590;Name=CCO53_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09590;old_locus_tag=CCO53_09580 NZ_NPLZ01000004.1 Protein Homology CDS 258682 259752 . - 0 ID=cds-WP_232473186.1;Parent=gene-CCO53_RS09590;Dbxref=GenBank:WP_232473186.1;Name=WP_232473186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000549718.1;locus_tag=CCO53_RS09590;product=glycosyltransferase;protein_id=WP_232473186.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 259760 260938 . - . ID=gene-CCO53_RS09595;Name=CCO53_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09595;old_locus_tag=CCO53_09585 NZ_NPLZ01000004.1 Protein Homology CDS 259760 260938 . - 0 ID=cds-WP_237141193.1;Parent=gene-CCO53_RS09595;Dbxref=GenBank:WP_237141193.1;Name=WP_237141193.1;Ontology_term=GO:0008755,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=O antigen polymerase activity|0008755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000231471.1;locus_tag=CCO53_RS09595;product=O-antigen polymerase;protein_id=WP_237141193.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 261089 262220 . - . ID=gene-CCO53_RS24010;Name=CCO53_RS24010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24010;old_locus_tag=CCO53_09590;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 261089 262220 . - 0 ID=cds-CCO53_RS24010;Parent=gene-CCO53_RS24010;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308629.1;locus_tag=CCO53_RS24010;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 262820 263821 . - . ID=gene-CCO53_RS09605;Name=CCO53_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09605;old_locus_tag=CCO53_09595 NZ_NPLZ01000004.1 Protein Homology CDS 262820 263821 . - 0 ID=cds-WP_000868492.1;Parent=gene-CCO53_RS09605;Dbxref=GenBank:WP_000868492.1;Name=WP_000868492.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233008.1;locus_tag=CCO53_RS09605;product=glycosyltransferase family 2 protein;protein_id=WP_000868492.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 263823 265121 . - . ID=gene-CCO53_RS09610;Name=CCO53_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09610;old_locus_tag=CCO53_09600 NZ_NPLZ01000004.1 Protein Homology CDS 263823 265121 . - 0 ID=cds-WP_080160208.1;Parent=gene-CCO53_RS09610;Dbxref=GenBank:WP_080160208.1;Name=WP_080160208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001228887.1;locus_tag=CCO53_RS09610;product=MATE family efflux transporter;protein_id=WP_080160208.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 265192 266208 . - . ID=gene-CCO53_RS09615;Name=rfbE;gbkey=Gene;gene=rfbE;gene_biotype=protein_coding;locus_tag=CCO53_RS09615;old_locus_tag=CCO53_09605 NZ_NPLZ01000004.1 Protein Homology CDS 265192 266208 . - 0 ID=cds-WP_000770933.1;Parent=gene-CCO53_RS09615;Dbxref=GenBank:WP_000770933.1;Name=WP_000770933.1;gbkey=CDS;gene=rfbE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770936.1;locus_tag=CCO53_RS09615;product=CDP-paratose 2-epimerase;protein_id=WP_000770933.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 266205 267044 . - . ID=gene-CCO53_RS09620;Name=rfbS;gbkey=Gene;gene=rfbS;gene_biotype=protein_coding;locus_tag=CCO53_RS09620;old_locus_tag=CCO53_09610 NZ_NPLZ01000004.1 Protein Homology CDS 266205 267044 . - 0 ID=cds-WP_000697758.1;Parent=gene-CCO53_RS09620;Dbxref=GenBank:WP_000697758.1;Name=WP_000697758.1;gbkey=CDS;gene=rfbS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697757.1;locus_tag=CCO53_RS09620;product=CDP-paratose synthase;protein_id=WP_000697758.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 267080 268393 . - . ID=gene-CCO53_RS09625;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=CCO53_RS09625;old_locus_tag=CCO53_09615 NZ_NPLZ01000004.1 Protein Homology CDS 267080 268393 . - 0 ID=cds-WP_000126349.1;Parent=gene-CCO53_RS09625;Dbxref=GenBank:WP_000126349.1;Name=WP_000126349.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=CCO53_RS09625;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_000126349.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 268420 269499 . - . ID=gene-CCO53_RS09630;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=CCO53_RS09630;old_locus_tag=CCO53_09620 NZ_NPLZ01000004.1 Protein Homology CDS 268420 269499 . - 0 ID=cds-WP_000565913.1;Parent=gene-CCO53_RS09630;Dbxref=GenBank:WP_000565913.1;Name=WP_000565913.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=CCO53_RS09630;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_000565913.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 269504 270277 . - . ID=gene-CCO53_RS09635;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=CCO53_RS09635;old_locus_tag=CCO53_09625 NZ_NPLZ01000004.1 Protein Homology CDS 269504 270277 . - 0 ID=cds-WP_000648783.1;Parent=gene-CCO53_RS09635;Dbxref=GenBank:WP_000648783.1;Name=WP_000648783.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=CCO53_RS09635;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_000648783.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 270274 271267 . - . ID=gene-CCO53_RS09640;Name=CCO53_RS09640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS09640;old_locus_tag=CCO53_09630;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 270274 271267 . - 0 ID=cds-CCO53_RS09640;Parent=gene-CCO53_RS09640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=CCO53_RS09640;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 271273 271824 . - . ID=gene-CCO53_RS09645;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=CCO53_RS09645;old_locus_tag=CCO53_09635 NZ_NPLZ01000004.1 Protein Homology CDS 271273 271824 . - 0 ID=cds-WP_000973709.1;Parent=gene-CCO53_RS09645;Dbxref=GenBank:WP_000973709.1;Name=WP_000973709.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=CCO53_RS09645;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_000973709.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 271825 272703 . - . ID=gene-CCO53_RS09650;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CCO53_RS09650;old_locus_tag=CCO53_09640 NZ_NPLZ01000004.1 Protein Homology CDS 271825 272703 . - 0 ID=cds-WP_079845641.1;Parent=gene-CCO53_RS09650;Dbxref=GenBank:WP_079845641.1;Name=WP_079845641.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=CCO53_RS09650;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_079845641.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 272751 273650 . - . ID=gene-CCO53_RS09655;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=CCO53_RS09655;old_locus_tag=CCO53_09645 NZ_NPLZ01000004.1 Protein Homology CDS 272751 273650 . - 0 ID=cds-WP_001023659.1;Parent=gene-CCO53_RS09655;Dbxref=GenBank:WP_001023659.1;Name=WP_001023659.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=CCO53_RS09655;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023659.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 273650 274735 . - . ID=gene-CCO53_RS09660;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=CCO53_RS09660;old_locus_tag=CCO53_09650 NZ_NPLZ01000004.1 Protein Homology CDS 273650 274735 . - 0 ID=cds-WP_000697846.1;Parent=gene-CCO53_RS09660;Dbxref=GenBank:WP_000697846.1;Name=WP_000697846.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=CCO53_RS09660;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000697846.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 275112 276005 . - . ID=gene-CCO53_RS09665;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=CCO53_RS09665;old_locus_tag=CCO53_09655 NZ_NPLZ01000004.1 Protein Homology CDS 275112 276005 . - 0 ID=cds-WP_000981469.1;Parent=gene-CCO53_RS09665;Dbxref=GenBank:WP_000981469.1;Name=WP_000981469.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=CCO53_RS09665;product=GalU regulator GalF;protein_id=WP_000981469.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 276183 277586 . - . ID=gene-CCO53_RS09670;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=CCO53_RS09670;old_locus_tag=CCO53_09660 NZ_NPLZ01000004.1 Protein Homology CDS 276183 277586 . - 0 ID=cds-WP_080154579.1;Parent=gene-CCO53_RS09670;Dbxref=GenBank:WP_080154579.1;Name=WP_080154579.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=CCO53_RS09670;product=colanic acid biosynthesis protein WcaM;protein_id=WP_080154579.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 277597 278817 . - . ID=gene-CCO53_RS09675;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=CCO53_RS09675;old_locus_tag=CCO53_09665 NZ_NPLZ01000004.1 Protein Homology CDS 277597 278817 . - 0 ID=cds-WP_069722191.1;Parent=gene-CCO53_RS09675;Dbxref=GenBank:WP_069722191.1;Name=WP_069722191.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=CCO53_RS09675;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_069722191.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 278814 280094 . - . ID=gene-CCO53_RS09680;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=CCO53_RS09680;old_locus_tag=CCO53_09670 NZ_NPLZ01000004.1 Protein Homology CDS 278814 280094 . - 0 ID=cds-WP_039520800.1;Parent=gene-CCO53_RS09680;Dbxref=GenBank:WP_039520800.1;Name=WP_039520800.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=CCO53_RS09680;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_039520800.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 280116 281594 . - . ID=gene-CCO53_RS09685;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=CCO53_RS09685;old_locus_tag=CCO53_09675 NZ_NPLZ01000004.1 Protein Homology CDS 280116 281594 . - 0 ID=cds-WP_076726844.1;Parent=gene-CCO53_RS09685;Dbxref=GenBank:WP_076726844.1;Name=WP_076726844.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=CCO53_RS09685;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_076726844.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 281696 283090 . - . ID=gene-CCO53_RS09690;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=CCO53_RS09690;old_locus_tag=CCO53_09680 NZ_NPLZ01000004.1 Protein Homology CDS 281696 283090 . - 0 ID=cds-WP_000183163.1;Parent=gene-CCO53_RS09690;Dbxref=GenBank:WP_000183163.1;Name=WP_000183163.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=CCO53_RS09690;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183163.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 283144 284514 . - . ID=gene-CCO53_RS09695;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=CCO53_RS09695;old_locus_tag=CCO53_09685 NZ_NPLZ01000004.1 Protein Homology CDS 283144 284514 . - 0 ID=cds-WP_080160202.1;Parent=gene-CCO53_RS09695;Dbxref=GenBank:WP_080160202.1;Name=WP_080160202.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=CCO53_RS09695;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_080160202.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 284625 286067 . - . ID=gene-CCO53_RS09700;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=CCO53_RS09700;old_locus_tag=CCO53_09690 NZ_NPLZ01000004.1 Protein Homology CDS 284625 286067 . - 0 ID=cds-WP_000605946.1;Parent=gene-CCO53_RS09700;Dbxref=GenBank:WP_000605946.1;Name=WP_000605946.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=CCO53_RS09700;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605946.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 286064 287287 . - . ID=gene-CCO53_RS09705;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=CCO53_RS09705;old_locus_tag=CCO53_09695 NZ_NPLZ01000004.1 Protein Homology CDS 286064 287287 . - 0 ID=cds-WP_094887647.1;Parent=gene-CCO53_RS09705;Dbxref=GenBank:WP_094887647.1;Name=WP_094887647.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=CCO53_RS09705;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_094887647.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 287284 287757 . - . ID=gene-CCO53_RS09710;Name=CCO53_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09710;old_locus_tag=CCO53_09700 NZ_NPLZ01000004.1 Protein Homology CDS 287284 287757 . - 0 ID=cds-WP_058331810.1;Parent=gene-CCO53_RS09710;Dbxref=GenBank:WP_058331810.1;Name=WP_058331810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=CCO53_RS09710;product=GDP-mannose mannosyl hydrolase;protein_id=WP_058331810.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 287760 288725 . - . ID=gene-CCO53_RS09715;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=CCO53_RS09715;old_locus_tag=CCO53_09705 NZ_NPLZ01000004.1 Protein Homology CDS 287760 288725 . - 0 ID=cds-WP_001041701.1;Parent=gene-CCO53_RS09715;Dbxref=GenBank:WP_001041701.1;Name=WP_001041701.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=CCO53_RS09715;product=GDP-L-fucose synthase;protein_id=WP_001041701.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 288728 289849 . - . ID=gene-CCO53_RS09720;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CCO53_RS09720;old_locus_tag=CCO53_09710 NZ_NPLZ01000004.1 Protein Homology CDS 288728 289849 . - 0 ID=cds-WP_000048160.1;Parent=gene-CCO53_RS09720;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=CCO53_RS09720;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 289873 290427 . - . ID=gene-CCO53_RS09725;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=CCO53_RS09725;old_locus_tag=CCO53_09715 NZ_NPLZ01000004.1 Protein Homology CDS 289873 290427 . - 0 ID=cds-WP_001153603.1;Parent=gene-CCO53_RS09725;Dbxref=GenBank:WP_001153603.1;Name=WP_001153603.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=CCO53_RS09725;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153603.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 290443 291189 . - . ID=gene-CCO53_RS09730;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=CCO53_RS09730;old_locus_tag=CCO53_09720 NZ_NPLZ01000004.1 Protein Homology CDS 290443 291189 . - 0 ID=cds-WP_000480132.1;Parent=gene-CCO53_RS09730;Dbxref=GenBank:WP_000480132.1;Name=WP_000480132.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=CCO53_RS09730;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000480132.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 291202 292416 . - . ID=gene-CCO53_RS09735;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=CCO53_RS09735;old_locus_tag=CCO53_09725 NZ_NPLZ01000004.1 Protein Homology CDS 291202 292416 . - 0 ID=cds-WP_000091392.1;Parent=gene-CCO53_RS09735;Dbxref=GenBank:WP_000091392.1;Name=WP_000091392.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=CCO53_RS09735;product=colanic acid polymerase WcaD;protein_id=WP_000091392.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 292391 293608 . - . ID=gene-CCO53_RS09740;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=CCO53_RS09740;old_locus_tag=CCO53_09730 NZ_NPLZ01000004.1 Protein Homology CDS 292391 293608 . - 0 ID=cds-WP_058331811.1;Parent=gene-CCO53_RS09740;Dbxref=GenBank:WP_058331811.1;Name=WP_058331811.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=CCO53_RS09740;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_058331811.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 293605 294093 . - . ID=gene-CCO53_RS09745;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=CCO53_RS09745;old_locus_tag=CCO53_09735 NZ_NPLZ01000004.1 Protein Homology CDS 293605 294093 . - 0 ID=cds-WP_000888724.1;Parent=gene-CCO53_RS09745;Dbxref=GenBank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=CCO53_RS09745;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 294096 294938 . - . ID=gene-CCO53_RS09750;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=CCO53_RS09750;old_locus_tag=CCO53_09740 NZ_NPLZ01000004.1 Protein Homology CDS 294096 294938 . - 0 ID=cds-WP_000205695.1;Parent=gene-CCO53_RS09750;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=CCO53_RS09750;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 295025 297184 . - . ID=gene-CCO53_RS09755;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=CCO53_RS09755;old_locus_tag=CCO53_09745 NZ_NPLZ01000004.1 Protein Homology CDS 295025 297184 . - 0 ID=cds-WP_094887648.1;Parent=gene-CCO53_RS09755;Dbxref=GenBank:WP_094887648.1;Name=WP_094887648.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=CCO53_RS09755;product=tyrosine-protein kinase Wzc;protein_id=WP_094887648.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 297181 297630 . - . ID=gene-CCO53_RS09760;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=CCO53_RS09760;old_locus_tag=CCO53_09750 NZ_NPLZ01000004.1 Protein Homology CDS 297181 297630 . - 0 ID=cds-WP_000482224.1;Parent=gene-CCO53_RS09760;Dbxref=GenBank:WP_000482224.1;Name=WP_000482224.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=CCO53_RS09760;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482224.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 297636 298775 . - . ID=gene-CCO53_RS09765;Name=CCO53_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09765;old_locus_tag=CCO53_09755 NZ_NPLZ01000004.1 Protein Homology CDS 297636 298775 . - 0 ID=cds-WP_000978076.1;Parent=gene-CCO53_RS09765;Dbxref=GenBank:WP_000978076.1;Name=WP_000978076.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=CCO53_RS09765;product=polysaccharide export protein;protein_id=WP_000978076.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 299450 301030 . + . ID=gene-CCO53_RS09775;Name=CCO53_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09775;old_locus_tag=CCO53_09765 NZ_NPLZ01000004.1 Protein Homology CDS 299450 301030 . + 0 ID=cds-WP_000454713.1;Parent=gene-CCO53_RS09775;Dbxref=GenBank:WP_000454713.1;Name=WP_000454713.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=CCO53_RS09775;product=TerC family protein;protein_id=WP_000454713.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 301116 302972 . - . ID=gene-CCO53_RS09780;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=CCO53_RS09780;old_locus_tag=CCO53_09770 NZ_NPLZ01000004.1 Protein Homology CDS 301116 302972 . - 0 ID=cds-WP_001252254.1;Parent=gene-CCO53_RS09780;Dbxref=GenBank:WP_001252254.1;Name=WP_001252254.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=CCO53_RS09780;product=outer membrane assembly protein AsmA;protein_id=WP_001252254.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 303011 303592 . - . ID=gene-CCO53_RS09785;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CCO53_RS09785;old_locus_tag=CCO53_09775 NZ_NPLZ01000004.1 Protein Homology CDS 303011 303592 . - 0 ID=cds-WP_001234783.1;Parent=gene-CCO53_RS09785;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=CCO53_RS09785;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 303683 304324 . - . ID=gene-CCO53_RS09790;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CCO53_RS09790;old_locus_tag=CCO53_09780 NZ_NPLZ01000004.1 Protein Homology CDS 303683 304324 . - 0 ID=cds-WP_000132082.1;Parent=gene-CCO53_RS09790;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=CCO53_RS09790;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 304654 307644 . + . ID=gene-CCO53_RS09795;Name=CCO53_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09795;old_locus_tag=CCO53_09785 NZ_NPLZ01000004.1 Protein Homology CDS 304654 307644 . + 0 ID=cds-WP_094887649.1;Parent=gene-CCO53_RS09795;Dbxref=GenBank:WP_094887649.1;Name=WP_094887649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=CCO53_RS09795;product=MASE1 domain-containing protein;protein_id=WP_094887649.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 307612 308481 . - . ID=gene-CCO53_RS09800;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=CCO53_RS09800;old_locus_tag=CCO53_09790 NZ_NPLZ01000004.1 Protein Homology CDS 307612 308481 . - 0 ID=cds-WP_080160199.1;Parent=gene-CCO53_RS09800;Dbxref=GenBank:WP_080160199.1;Name=WP_080160199.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=CCO53_RS09800;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_080160199.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 308615 309967 . + . ID=gene-CCO53_RS09810;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=CCO53_RS09810;old_locus_tag=CCO53_09800 NZ_NPLZ01000004.1 Protein Homology CDS 308615 309967 . + 0 ID=cds-WP_080160198.1;Parent=gene-CCO53_RS09810;Dbxref=GenBank:WP_080160198.1;Name=WP_080160198.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=CCO53_RS09810;product=molecular chaperone;protein_id=WP_080160198.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 310065 310124 . - . ID=gene-CCO53_RS23655;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=CCO53_RS23655 NZ_NPLZ01000004.1 Protein Homology CDS 310065 310124 . - 0 ID=cds-WP_001805500.1;Parent=gene-CCO53_RS23655;Dbxref=GenBank:WP_001805500.1;Name=WP_001805500.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=CCO53_RS23655;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001805500.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 310407 311648 . + . ID=gene-CCO53_RS09815;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=CCO53_RS09815;old_locus_tag=CCO53_09805 NZ_NPLZ01000004.1 Protein Homology CDS 310407 311648 . + 0 ID=cds-WP_000678815.1;Parent=gene-CCO53_RS09815;Dbxref=GenBank:WP_000678815.1;Name=WP_000678815.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=CCO53_RS09815;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678815.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 311648 314770 . + . ID=gene-CCO53_RS09820;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=CCO53_RS09820;old_locus_tag=CCO53_09810 NZ_NPLZ01000004.1 Protein Homology CDS 311648 314770 . + 0 ID=cds-WP_080160197.1;Parent=gene-CCO53_RS09820;Dbxref=GenBank:WP_080160197.1;Name=WP_080160197.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=CCO53_RS09820;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_080160197.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 314771 317851 . + . ID=gene-CCO53_RS09825;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=CCO53_RS09825;old_locus_tag=CCO53_09815 NZ_NPLZ01000004.1 Protein Homology CDS 314771 317851 . + 0 ID=cds-WP_058331817.1;Parent=gene-CCO53_RS09825;Dbxref=GenBank:WP_058331817.1;Name=WP_058331817.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=CCO53_RS09825;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_058331817.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 317848 319260 . + . ID=gene-CCO53_RS09830;Name=CCO53_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09830;old_locus_tag=CCO53_09820 NZ_NPLZ01000004.1 Protein Homology CDS 317848 319260 . + 0 ID=cds-WP_000137818.1;Parent=gene-CCO53_RS09830;Dbxref=GenBank:WP_000137818.1;Name=WP_000137818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=CCO53_RS09830;product=MFS transporter;protein_id=WP_000137818.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 319260 320663 . + . ID=gene-CCO53_RS09835;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=CCO53_RS09835;old_locus_tag=CCO53_09825 NZ_NPLZ01000004.1 Protein Homology CDS 319260 320663 . + 0 ID=cds-WP_000870073.1;Parent=gene-CCO53_RS09835;Dbxref=GenBank:WP_000870073.1;Name=WP_000870073.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=CCO53_RS09835;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000870073.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 320660 321382 . + . ID=gene-CCO53_RS09840;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=CCO53_RS09840;old_locus_tag=CCO53_09830 NZ_NPLZ01000004.1 Protein Homology CDS 320660 321382 . + 0 ID=cds-WP_000137854.1;Parent=gene-CCO53_RS09840;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=CCO53_RS09840;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 321651 322853 . + . ID=gene-CCO53_RS09850;Name=CCO53_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09850;old_locus_tag=CCO53_09840 NZ_NPLZ01000004.1 Protein Homology CDS 321651 322853 . + 0 ID=cds-WP_000141078.1;Parent=gene-CCO53_RS09850;Dbxref=GenBank:WP_000141078.1;Name=WP_000141078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=CCO53_RS09850;product=hypothetical protein;protein_id=WP_000141078.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 322853 323569 . + . ID=gene-CCO53_RS09855;Name=CCO53_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09855;old_locus_tag=CCO53_09845 NZ_NPLZ01000004.1 Protein Homology CDS 322853 323569 . + 0 ID=cds-WP_058331818.1;Parent=gene-CCO53_RS09855;Dbxref=GenBank:WP_058331818.1;Name=WP_058331818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=CCO53_RS09855;product=DUF1266 domain-containing protein;protein_id=WP_058331818.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 323580 325691 . + . ID=gene-CCO53_RS09860;Name=CCO53_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09860;old_locus_tag=CCO53_09850 NZ_NPLZ01000004.1 Protein Homology CDS 323580 325691 . + 0 ID=cds-WP_058331819.1;Parent=gene-CCO53_RS09860;Dbxref=GenBank:WP_058331819.1;Name=WP_058331819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=CCO53_RS09860;product=DUF4034 domain-containing protein;protein_id=WP_058331819.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 325807 327168 . + . ID=gene-CCO53_RS09865;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=CCO53_RS09865;old_locus_tag=CCO53_09855 NZ_NPLZ01000004.1 Protein Homology CDS 325807 327168 . + 0 ID=cds-WP_001517981.1;Parent=gene-CCO53_RS09865;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=CCO53_RS09865;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_001517981.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq pseudogene 327619 327798 . + . ID=gene-CCO53_RS09870;Name=CCO53_RS09870;end_range=327798,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS09870;old_locus_tag=CCO53_09860;partial=true;pseudo=true NZ_NPLZ01000004.1 Protein Homology CDS 327619 327798 . + 0 ID=cds-CCO53_RS09870;Parent=gene-CCO53_RS09870;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=327798,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=CCO53_RS09870;partial=true;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 327808 328224 . - . ID=gene-CCO53_RS09875;Name=CCO53_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09875;old_locus_tag=CCO53_09865 NZ_NPLZ01000004.1 Protein Homology CDS 327808 328224 . - 0 ID=cds-WP_076728211.1;Parent=gene-CCO53_RS09875;Dbxref=GenBank:WP_076728211.1;Name=WP_076728211.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=CCO53_RS09875;product=CesT family type III secretion system chaperone;protein_id=WP_076728211.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 328553 328888 . - . ID=gene-CCO53_RS09885;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=CCO53_RS09885;old_locus_tag=CCO53_09875 NZ_NPLZ01000004.1 Protein Homology CDS 328553 328888 . - 0 ID=cds-WP_058331821.1;Parent=gene-CCO53_RS09885;Dbxref=GenBank:WP_058331821.1;Name=WP_058331821.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=CCO53_RS09885;product=type III secretion system effector SteD;protein_id=WP_058331821.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 329600 330499 . + . ID=gene-CCO53_RS09895;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=CCO53_RS09895;old_locus_tag=CCO53_09885 NZ_NPLZ01000004.1 Protein Homology CDS 329600 330499 . + 0 ID=cds-WP_001273395.1;Parent=gene-CCO53_RS09895;Dbxref=GenBank:WP_001273395.1;Name=WP_001273395.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=CCO53_RS09895;product=lipid kinase YegS;protein_id=WP_001273395.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 330552 331604 . - . ID=gene-CCO53_RS09900;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=CCO53_RS09900;old_locus_tag=CCO53_09890 NZ_NPLZ01000004.1 Protein Homology CDS 330552 331604 . - 0 ID=cds-WP_000129590.1;Parent=gene-CCO53_RS09900;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=CCO53_RS09900;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 331857 333128 . + . ID=gene-CCO53_RS09905;Name=CCO53_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09905;old_locus_tag=CCO53_09895 NZ_NPLZ01000004.1 Protein Homology CDS 331857 333128 . + 0 ID=cds-WP_094887650.1;Parent=gene-CCO53_RS09905;Dbxref=GenBank:WP_094887650.1;Name=WP_094887650.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=CCO53_RS09905;product=nucleoside permease;protein_id=WP_094887650.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 333125 334129 . + . ID=gene-CCO53_RS09910;Name=CCO53_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09910;old_locus_tag=CCO53_09900 NZ_NPLZ01000004.1 Protein Homology CDS 333125 334129 . + 0 ID=cds-WP_000642799.1;Parent=gene-CCO53_RS09910;Dbxref=GenBank:WP_000642799.1;Name=WP_000642799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=CCO53_RS09910;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642799.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 334126 335091 . + . ID=gene-CCO53_RS09915;Name=CCO53_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09915;old_locus_tag=CCO53_09905 NZ_NPLZ01000004.1 Protein Homology CDS 334126 335091 . + 0 ID=cds-WP_080197787.1;Parent=gene-CCO53_RS09915;Dbxref=GenBank:WP_080197787.1;Name=WP_080197787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=CCO53_RS09915;product=PfkB family carbohydrate kinase;protein_id=WP_080197787.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 335065 335811 . - . ID=gene-CCO53_RS09920;Name=CCO53_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09920;old_locus_tag=CCO53_09910 NZ_NPLZ01000004.1 Protein Homology CDS 335065 335811 . - 0 ID=cds-WP_000434062.1;Parent=gene-CCO53_RS09920;Dbxref=GenBank:WP_000434062.1;Name=WP_000434062.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=CCO53_RS09920;product=GntR family transcriptional regulator;protein_id=WP_000434062.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 335847 336647 . - . ID=gene-CCO53_RS09925;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CCO53_RS09925;old_locus_tag=CCO53_09915 NZ_NPLZ01000004.1 Protein Homology CDS 335847 336647 . - 0 ID=cds-WP_094887651.1;Parent=gene-CCO53_RS09925;Dbxref=GenBank:WP_094887651.1;Name=WP_094887651.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=CCO53_RS09925;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_094887651.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 336634 337431 . - . ID=gene-CCO53_RS09930;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CCO53_RS09930;old_locus_tag=CCO53_09920 NZ_NPLZ01000004.1 Protein Homology CDS 336634 337431 . - 0 ID=cds-WP_094887652.1;Parent=gene-CCO53_RS09930;Dbxref=GenBank:WP_094887652.1;Name=WP_094887652.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=CCO53_RS09930;product=hydroxyethylthiazole kinase;protein_id=WP_094887652.1;transl_table=11 NZ_NPLZ01000004.1 cmsearch riboswitch 337463 337559 . - . ID=id-NZ_NPLZ01000004.1:337463..337559;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPLZ01000004.1 RefSeq gene 337841 338155 . + . ID=gene-CCO53_RS09935;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=CCO53_RS09935;old_locus_tag=CCO53_09925 NZ_NPLZ01000004.1 Protein Homology CDS 337841 338155 . + 0 ID=cds-WP_000837534.1;Parent=gene-CCO53_RS09935;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=CCO53_RS09935;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 338199 339221 . - . ID=gene-CCO53_RS09940;Name=CCO53_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09940;old_locus_tag=CCO53_09930 NZ_NPLZ01000004.1 Protein Homology CDS 338199 339221 . - 0 ID=cds-WP_076935416.1;Parent=gene-CCO53_RS09940;Dbxref=GenBank:WP_076935416.1;Name=WP_076935416.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=CCO53_RS09940;product=fimbrial protein;protein_id=WP_076935416.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 339237 341723 . - . ID=gene-CCO53_RS09945;Name=CCO53_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09945;old_locus_tag=CCO53_09935 NZ_NPLZ01000004.1 Protein Homology CDS 339237 341723 . - 0 ID=cds-WP_094887653.1;Parent=gene-CCO53_RS09945;Dbxref=GenBank:WP_094887653.1;Name=WP_094887653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=CCO53_RS09945;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_094887653.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 341752 342432 . - . ID=gene-CCO53_RS09950;Name=CCO53_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09950;old_locus_tag=CCO53_09940 NZ_NPLZ01000004.1 Protein Homology CDS 341752 342432 . - 0 ID=cds-WP_000871808.1;Parent=gene-CCO53_RS09950;Dbxref=GenBank:WP_000871808.1;Name=WP_000871808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=CCO53_RS09950;product=fimbrial assembly chaperone;protein_id=WP_000871808.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 342494 343027 . - . ID=gene-CCO53_RS09955;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=CCO53_RS09955;old_locus_tag=CCO53_09945 NZ_NPLZ01000004.1 Protein Homology CDS 342494 343027 . - 0 ID=cds-WP_076935418.1;Parent=gene-CCO53_RS09955;Dbxref=GenBank:WP_076935418.1;Name=WP_076935418.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=CCO53_RS09955;product=fimbrial protein YehD;protein_id=WP_076935418.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 343306 343587 . - . ID=gene-CCO53_RS09960;Name=CCO53_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09960;old_locus_tag=CCO53_09950 NZ_NPLZ01000004.1 Protein Homology CDS 343306 343587 . - 0 ID=cds-WP_000760404.1;Parent=gene-CCO53_RS09960;Dbxref=GenBank:WP_000760404.1;Name=WP_000760404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=CCO53_RS09960;product=YehE family protein;protein_id=WP_000760404.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 343865 344974 . - . ID=gene-CCO53_RS09965;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=CCO53_RS09965;old_locus_tag=CCO53_09955 NZ_NPLZ01000004.1 Protein Homology CDS 343865 344974 . - 0 ID=cds-WP_001005424.1;Parent=gene-CCO53_RS09965;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=CCO53_RS09965;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 345139 347172 . + . ID=gene-CCO53_RS09970;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CCO53_RS09970;old_locus_tag=CCO53_09960 NZ_NPLZ01000004.1 Protein Homology CDS 345139 347172 . + 0 ID=cds-WP_000195334.1;Parent=gene-CCO53_RS09970;Dbxref=GenBank:WP_000195334.1;Name=WP_000195334.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=CCO53_RS09970;product=methionine--tRNA ligase;protein_id=WP_000195334.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 347413 347871 . + . ID=gene-CCO53_RS09975;Name=CCO53_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09975;old_locus_tag=CCO53_09965 NZ_NPLZ01000004.1 Protein Homology CDS 347413 347871 . + 0 ID=cds-WP_000703137.1;Parent=gene-CCO53_RS09975;Dbxref=GenBank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=CCO53_RS09975;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 348043 348573 . + . ID=gene-CCO53_RS09980;Name=CCO53_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09980;old_locus_tag=CCO53_09970 NZ_NPLZ01000004.1 Protein Homology CDS 348043 348573 . + 0 ID=cds-WP_001265351.1;Parent=gene-CCO53_RS09980;Dbxref=GenBank:WP_001265351.1;Name=WP_001265351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=CCO53_RS09980;product=YehR family lipoprotein;protein_id=WP_001265351.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 348630 349097 . - . ID=gene-CCO53_RS09985;Name=CCO53_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09985;old_locus_tag=CCO53_09975 NZ_NPLZ01000004.1 Protein Homology CDS 348630 349097 . - 0 ID=cds-WP_000950422.1;Parent=gene-CCO53_RS09985;Dbxref=GenBank:WP_000950422.1;Name=WP_000950422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=CCO53_RS09985;product=DUF1456 family protein;protein_id=WP_000950422.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 349144 349863 . - . ID=gene-CCO53_RS09990;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=CCO53_RS09990;old_locus_tag=CCO53_09980 NZ_NPLZ01000004.1 Protein Homology CDS 349144 349863 . - 0 ID=cds-WP_000598637.1;Parent=gene-CCO53_RS09990;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=CCO53_RS09990;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 349860 351545 . - . ID=gene-CCO53_RS09995;Name=CCO53_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS09995;old_locus_tag=CCO53_09985 NZ_NPLZ01000004.1 Protein Homology CDS 349860 351545 . - 0 ID=cds-WP_000272850.1;Parent=gene-CCO53_RS09995;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=CCO53_RS09995;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 351768 352499 . + . ID=gene-CCO53_RS10000;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=CCO53_RS10000;old_locus_tag=CCO53_09990 NZ_NPLZ01000004.1 Protein Homology CDS 351768 352499 . + 0 ID=cds-WP_001240418.1;Parent=gene-CCO53_RS10000;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=CCO53_RS10000;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 352559 352666 . + . ID=gene-CCO53_RS10005;Name=CCO53_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10005;old_locus_tag=CCO53_09995 NZ_NPLZ01000004.1 Protein Homology CDS 352559 352666 . + 0 ID=cds-WP_001261696.1;Parent=gene-CCO53_RS10005;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=CCO53_RS10005;product=protein YohO;protein_id=WP_001261696.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 352647 353378 . - . ID=gene-CCO53_RS10010;Name=CCO53_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10010;old_locus_tag=CCO53_10000 NZ_NPLZ01000004.1 Protein Homology CDS 352647 353378 . - 0 ID=cds-WP_000824857.1;Parent=gene-CCO53_RS10010;Dbxref=GenBank:WP_000824857.1;Name=WP_000824857.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=CCO53_RS10010;product=ABC transporter permease;protein_id=WP_000824857.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 353362 354309 . - . ID=gene-CCO53_RS10015;Name=CCO53_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10015;old_locus_tag=CCO53_10005 NZ_NPLZ01000004.1 Protein Homology CDS 353362 354309 . - 0 ID=cds-WP_000569166.1;Parent=gene-CCO53_RS10015;Dbxref=GenBank:WP_000569166.1;Name=WP_000569166.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=CCO53_RS10015;product=ABC transporter ATP-binding protein;protein_id=WP_000569166.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 354302 355471 . - . ID=gene-CCO53_RS10020;Name=CCO53_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10020;old_locus_tag=CCO53_10010 NZ_NPLZ01000004.1 Protein Homology CDS 354302 355471 . - 0 ID=cds-WP_001278121.1;Parent=gene-CCO53_RS10020;Dbxref=GenBank:WP_001278121.1;Name=WP_001278121.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=CCO53_RS10020;product=ABC transporter permease;protein_id=WP_001278121.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 355475 356392 . - . ID=gene-CCO53_RS10025;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=CCO53_RS10025;old_locus_tag=CCO53_10015 NZ_NPLZ01000004.1 Protein Homology CDS 355475 356392 . - 0 ID=cds-WP_000155876.1;Parent=gene-CCO53_RS10025;Dbxref=GenBank:WP_000155876.1;Name=WP_000155876.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=CCO53_RS10025;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155876.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 356573 358870 . - . ID=gene-CCO53_RS10030;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=CCO53_RS10030;old_locus_tag=CCO53_10020 NZ_NPLZ01000004.1 Protein Homology CDS 356573 358870 . - 0 ID=cds-WP_000871555.1;Parent=gene-CCO53_RS10030;Dbxref=GenBank:WP_000871555.1;Name=WP_000871555.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=CCO53_RS10030;product=beta-glucosidase BglX;protein_id=WP_000871555.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 359137 360867 . + . ID=gene-CCO53_RS10035;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=CCO53_RS10035;old_locus_tag=CCO53_10025 NZ_NPLZ01000004.1 Protein Homology CDS 359137 360867 . + 0 ID=cds-WP_000095232.1;Parent=gene-CCO53_RS10035;Dbxref=GenBank:WP_000095232.1;Name=WP_000095232.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=CCO53_RS10035;product=D-lactate dehydrogenase;protein_id=WP_000095232.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 360926 361873 . - . ID=gene-CCO53_RS10040;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=CCO53_RS10040;old_locus_tag=CCO53_10030 NZ_NPLZ01000004.1 Protein Homology CDS 360926 361873 . - 0 ID=cds-WP_000911552.1;Parent=gene-CCO53_RS10040;Dbxref=GenBank:WP_000911552.1;Name=WP_000911552.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=CCO53_RS10040;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911552.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 362039 362626 . - . ID=gene-CCO53_RS10050;Name=CCO53_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10050;old_locus_tag=CCO53_10040 NZ_NPLZ01000004.1 Protein Homology CDS 362039 362626 . - 0 ID=cds-WP_001017057.1;Parent=gene-CCO53_RS10050;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=CCO53_RS10050;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 362785 363354 . + . ID=gene-CCO53_RS10055;Name=CCO53_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10055;old_locus_tag=CCO53_10045 NZ_NPLZ01000004.1 Protein Homology CDS 362785 363354 . + 0 ID=cds-WP_001523476.1;Parent=gene-CCO53_RS10055;Dbxref=GenBank:WP_001523476.1;Name=WP_001523476.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=CCO53_RS10055;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 363402 364163 . - . ID=gene-CCO53_RS10060;Name=CCO53_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10060;old_locus_tag=CCO53_10050 NZ_NPLZ01000004.1 Protein Homology CDS 363402 364163 . - 0 ID=cds-WP_000169608.1;Parent=gene-CCO53_RS10060;Dbxref=GenBank:WP_000169608.1;Name=WP_000169608.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=CCO53_RS10060;product=SDR family oxidoreductase;protein_id=WP_000169608.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 364229 365665 . - . ID=gene-CCO53_RS10065;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=CCO53_RS10065;old_locus_tag=CCO53_10055 NZ_NPLZ01000004.1 Protein Homology CDS 364229 365665 . - 0 ID=cds-WP_094887654.1;Parent=gene-CCO53_RS10065;Dbxref=GenBank:WP_094887654.1;Name=WP_094887654.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=CCO53_RS10065;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_094887654.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 365983 366066 . + . ID=gene-CCO53_RS10070;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=CCO53_RS10070;old_locus_tag=CCO53_10060 NZ_NPLZ01000004.1 Protein Homology CDS 365983 366066 . + 0 ID=cds-WP_000698460.1;Parent=gene-CCO53_RS10070;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=CCO53_RS10070;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 366124 367062 . - . ID=gene-CCO53_RS10075;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=CCO53_RS10075;old_locus_tag=CCO53_10065 NZ_NPLZ01000004.1 Protein Homology CDS 366124 367062 . - 0 ID=cds-WP_001264839.1;Parent=gene-CCO53_RS10075;Dbxref=GenBank:WP_001264839.1;Name=WP_001264839.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=CCO53_RS10075;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264839.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 367171 368364 . - . ID=gene-CCO53_RS10080;Name=CCO53_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10080;old_locus_tag=CCO53_10070 NZ_NPLZ01000004.1 Protein Homology CDS 367171 368364 . - 0 ID=cds-WP_000150103.1;Parent=gene-CCO53_RS10080;Dbxref=GenBank:WP_000150103.1;Name=WP_000150103.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=CCO53_RS10080;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150103.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 368379 369023 . - . ID=gene-CCO53_RS10085;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=CCO53_RS10085;old_locus_tag=CCO53_10075 NZ_NPLZ01000004.1 Protein Homology CDS 368379 369023 . - 0 ID=cds-WP_000781195.1;Parent=gene-CCO53_RS10085;Dbxref=GenBank:WP_000781195.1;Name=WP_000781195.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=CCO53_RS10085;product=maleylacetoacetate isomerase;protein_id=WP_000781195.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 369032 369733 . - . ID=gene-CCO53_RS10090;Name=CCO53_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10090;old_locus_tag=CCO53_10080 NZ_NPLZ01000004.1 Protein Homology CDS 369032 369733 . - 0 ID=cds-WP_000170621.1;Parent=gene-CCO53_RS10090;Dbxref=GenBank:WP_000170621.1;Name=WP_000170621.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=CCO53_RS10090;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170621.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 369749 370786 . - . ID=gene-CCO53_RS10095;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=CCO53_RS10095;old_locus_tag=CCO53_10085 NZ_NPLZ01000004.1 Protein Homology CDS 369749 370786 . - 0 ID=cds-WP_001289857.1;Parent=gene-CCO53_RS10095;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=CCO53_RS10095;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 370798 372156 . - . ID=gene-CCO53_RS10100;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=CCO53_RS10100;old_locus_tag=CCO53_10090 NZ_NPLZ01000004.1 Protein Homology CDS 370798 372156 . - 0 ID=cds-WP_094887655.1;Parent=gene-CCO53_RS10100;Dbxref=GenBank:WP_094887655.1;Name=WP_094887655.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=CCO53_RS10100;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_094887655.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 372282 373190 . + . ID=gene-CCO53_RS10105;Name=CCO53_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10105;old_locus_tag=CCO53_10095 NZ_NPLZ01000004.1 Protein Homology CDS 372282 373190 . + 0 ID=cds-WP_000024658.1;Parent=gene-CCO53_RS10105;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=CCO53_RS10105;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 373322 373720 . + . ID=gene-CCO53_RS10110;Name=CCO53_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10110;old_locus_tag=CCO53_10100 NZ_NPLZ01000004.1 Protein Homology CDS 373322 373720 . + 0 ID=cds-WP_000045719.1;Parent=gene-CCO53_RS10110;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=CCO53_RS10110;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 373717 374412 . + . ID=gene-CCO53_RS10115;Name=CCO53_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10115;old_locus_tag=CCO53_10105 NZ_NPLZ01000004.1 Protein Homology CDS 373717 374412 . + 0 ID=cds-WP_000989296.1;Parent=gene-CCO53_RS10115;Dbxref=GenBank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=CCO53_RS10115;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 374566 375450 . + . ID=gene-CCO53_RS10120;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CCO53_RS10120;old_locus_tag=CCO53_10110 NZ_NPLZ01000004.1 Protein Homology CDS 374566 375450 . + 0 ID=cds-WP_000553526.1;Parent=gene-CCO53_RS10120;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=CCO53_RS10120;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 375627 376346 . + . ID=gene-CCO53_RS10125;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=CCO53_RS10125;old_locus_tag=CCO53_10115 NZ_NPLZ01000004.1 Protein Homology CDS 375627 376346 . + 0 ID=cds-WP_000920081.1;Parent=gene-CCO53_RS10125;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=CCO53_RS10125;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 376343 376588 . + . ID=gene-CCO53_RS10130;Name=CCO53_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10130;old_locus_tag=CCO53_10120 NZ_NPLZ01000004.1 Protein Homology CDS 376343 376588 . + 0 ID=cds-WP_000605187.1;Parent=gene-CCO53_RS10130;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=CCO53_RS10130;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11 NZ_NPLZ01000004.1 RefSeq gene 376793 377819 . + . ID=gene-CCO53_RS10135;Name=CCO53_RS10135;end_range=377819,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10135;old_locus_tag=CCO53_10125;partial=true NZ_NPLZ01000004.1 Protein Homology CDS 376793 377819 . + 0 ID=cds-WP_094887656.1;Parent=gene-CCO53_RS10135;Dbxref=GenBank:WP_094887656.1;Name=WP_094887656.1;Ontology_term=GO:0016491;end_range=377819,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=CCO53_RS10135;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_094887656.1;transl_table=11 ##sequence-region NZ_NPLZ01000040.1 1 596 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000040.1 RefSeq region 1 596 . + . ID=NZ_NPLZ01000040.1:1..596;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000040.1 RefSeq gene 1 596 . - . ID=gene-CCO53_RS23550;Name=CCO53_RS23550;end_range=596,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23550;old_locus_tag=CCO53_23500;partial=true;start_range=.,1 NZ_NPLZ01000040.1 Protein Homology CDS 1 596 . - 2 ID=cds-WP_140428412.1;Parent=gene-CCO53_RS23550;Dbxref=GenBank:WP_140428412.1;Name=WP_140428412.1;end_range=596,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO53_RS23550;partial=true;product=Ig-like domain-containing protein;protein_id=WP_140428412.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPLZ01000041.1 1 539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000041.1 RefSeq region 1 539 . + . ID=NZ_NPLZ01000041.1:1..539;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000041.1 RefSeq gene 1 539 . + . ID=gene-CCO53_RS23555;Name=CCO53_RS23555;end_range=539,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23555;old_locus_tag=CCO53_23505;partial=true;start_range=.,1 NZ_NPLZ01000041.1 Protein Homology CDS 1 539 . + 0 ID=cds-WP_140428413.1;Parent=gene-CCO53_RS23555;Dbxref=GenBank:WP_140428413.1;Name=WP_140428413.1;end_range=539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO53_RS23555;partial=true;product=Ig-like domain-containing protein;protein_id=WP_140428413.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPLZ01000042.1 1 523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000042.1 RefSeq region 1 523 . + . ID=NZ_NPLZ01000042.1:1..523;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000042.1 RefSeq gene 1 523 . - . ID=gene-CCO53_RS23560;Name=CCO53_RS23560;end_range=523,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS23560;old_locus_tag=CCO53_23510;partial=true;start_range=.,1 NZ_NPLZ01000042.1 cmsearch rRNA 1 523 . - . ID=rna-CCO53_RS23560;Parent=gene-CCO53_RS23560;Dbxref=RFAM:RF02541;end_range=523,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23560;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPLZ01000042.1 cmsearch exon 1 523 . - . ID=exon-CCO53_RS23560-1;Parent=rna-CCO53_RS23560;Dbxref=RFAM:RF02541;end_range=523,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS23560;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPLZ01000005.1 1 349720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000005.1 RefSeq region 1 349720 . + . ID=NZ_NPLZ01000005.1:1..349720;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000005.1 RefSeq pseudogene 1 126 . - . ID=gene-CCO53_RS10140;Name=CCO53_RS10140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS10140;partial=true;pseudo=true;start_range=.,1 NZ_NPLZ01000005.1 Protein Homology CDS 1 126 . - 0 ID=cds-CCO53_RS10140;Parent=gene-CCO53_RS10140;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO53_RS10140;partial=true;product=sodium ion-translocating decarboxylase subunit beta;pseudo=true;start_range=.,1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 142 1911 . - . ID=gene-CCO53_RS10145;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO53_RS10145;old_locus_tag=CCO53_10130 NZ_NPLZ01000005.1 Protein Homology CDS 142 1911 . - 0 ID=cds-WP_094887659.1;Parent=gene-CCO53_RS10145;Dbxref=GenBank:WP_094887659.1;Name=WP_094887659.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO53_RS10145;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_094887659.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 1927 2175 . - . ID=gene-CCO53_RS10150;Name=CCO53_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10150;old_locus_tag=CCO53_10135 NZ_NPLZ01000005.1 Protein Homology CDS 1927 2175 . - 0 ID=cds-WP_023232566.1;Parent=gene-CCO53_RS10150;Dbxref=GenBank:WP_023232566.1;Name=WP_023232566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=CCO53_RS10150;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_023232566.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 2225 3493 . - . ID=gene-CCO53_RS10155;Name=CCO53_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10155;old_locus_tag=CCO53_10140 NZ_NPLZ01000005.1 Protein Homology CDS 2225 3493 . - 0 ID=cds-WP_000074129.1;Parent=gene-CCO53_RS10155;Dbxref=GenBank:WP_000074129.1;Name=WP_000074129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=CCO53_RS10155;product=SLC13 family permease;protein_id=WP_000074129.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 3716 4699 . + . ID=gene-CCO53_RS10160;Name=CCO53_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10160;old_locus_tag=CCO53_10145 NZ_NPLZ01000005.1 Protein Homology CDS 3716 4699 . + 0 ID=cds-WP_000282119.1;Parent=gene-CCO53_RS10160;Dbxref=GenBank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=CCO53_RS10160;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 4700 5590 . - . ID=gene-CCO53_RS10165;Name=CCO53_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10165;old_locus_tag=CCO53_10150 NZ_NPLZ01000005.1 Protein Homology CDS 4700 5590 . - 0 ID=cds-WP_080207851.1;Parent=gene-CCO53_RS10165;Dbxref=GenBank:WP_080207851.1;Name=WP_080207851.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=CCO53_RS10165;product=LysR family transcriptional regulator;protein_id=WP_080207851.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 5720 6565 . + . ID=gene-CCO53_RS10170;Name=CCO53_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10170;old_locus_tag=CCO53_10155 NZ_NPLZ01000005.1 Protein Homology CDS 5720 6565 . + 0 ID=cds-WP_000086831.1;Parent=gene-CCO53_RS10170;Dbxref=GenBank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=CCO53_RS10170;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 6580 7125 . + . ID=gene-CCO53_RS10175;Name=CCO53_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10175;old_locus_tag=CCO53_10160 NZ_NPLZ01000005.1 Protein Homology CDS 6580 7125 . + 0 ID=cds-WP_000970374.1;Parent=gene-CCO53_RS10175;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=CCO53_RS10175;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 7219 8271 . - . ID=gene-CCO53_RS10180;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=CCO53_RS10180;old_locus_tag=CCO53_10165 NZ_NPLZ01000005.1 Protein Homology CDS 7219 8271 . - 0 ID=cds-WP_001109233.1;Parent=gene-CCO53_RS10180;Dbxref=GenBank:WP_001109233.1;Name=WP_001109233.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=CCO53_RS10180;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109233.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 8591 8977 . + . ID=gene-CCO53_RS10185;Name=CCO53_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10185;old_locus_tag=CCO53_10170 NZ_NPLZ01000005.1 Protein Homology CDS 8591 8977 . + 0 ID=cds-WP_000784380.1;Parent=gene-CCO53_RS10185;Dbxref=GenBank:WP_000784380.1;Name=WP_000784380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=CCO53_RS10185;product=YbgS-like family protein;protein_id=WP_000784380.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 9088 10026 . + . ID=gene-CCO53_RS10190;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=CCO53_RS10190;old_locus_tag=CCO53_10175 NZ_NPLZ01000005.1 Protein Homology CDS 9088 10026 . + 0 ID=cds-WP_000951251.1;Parent=gene-CCO53_RS10190;Dbxref=GenBank:WP_000951251.1;Name=WP_000951251.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=CCO53_RS10190;product=CDF family zinc transporter ZitB;protein_id=WP_000951251.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 10023 10742 . - . ID=gene-CCO53_RS10195;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=CCO53_RS10195;old_locus_tag=CCO53_10180 NZ_NPLZ01000005.1 Protein Homology CDS 10023 10742 . - 0 ID=cds-WP_061372157.1;Parent=gene-CCO53_RS10195;Dbxref=GenBank:WP_061372157.1;Name=WP_061372157.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=CCO53_RS10195;product=nicotinamide riboside transporter PnuC;protein_id=WP_061372157.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 10767 11810 . - . ID=gene-CCO53_RS10200;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=CCO53_RS10200;old_locus_tag=CCO53_10185 NZ_NPLZ01000005.1 Protein Homology CDS 10767 11810 . - 0 ID=cds-WP_000115343.1;Parent=gene-CCO53_RS10200;Dbxref=GenBank:WP_000115343.1;Name=WP_000115343.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=CCO53_RS10200;product=quinolinate synthase NadA;protein_id=WP_000115343.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 12105 12230 . - . ID=gene-CCO53_RS10205;Name=CCO53_RS10205;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO53_RS10205;old_locus_tag=CCO53_10190 NZ_NPLZ01000005.1 cmsearch ncRNA 12105 12230 . - . ID=rna-CCO53_RS10205;Parent=gene-CCO53_RS10205;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS10205;product=RtT sRNA NZ_NPLZ01000005.1 cmsearch exon 12105 12230 . - . ID=exon-CCO53_RS10205-1;Parent=rna-CCO53_RS10205;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS10205;product=RtT sRNA NZ_NPLZ01000005.1 RefSeq gene 12359 12434 . - . ID=gene-CCO53_RS10210;Name=CCO53_RS10210;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10210;old_locus_tag=CCO53_10195 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 12359 12434 . - . ID=rna-CCO53_RS10210;Parent=gene-CCO53_RS10210;anticodon=(pos:complement(12399..12401));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10210;product=tRNA-Lys NZ_NPLZ01000005.1 tRNAscan-SE exon 12359 12434 . - . ID=exon-CCO53_RS10210-1;Parent=rna-CCO53_RS10210;anticodon=(pos:complement(12399..12401));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10210;product=tRNA-Lys NZ_NPLZ01000005.1 RefSeq gene 12569 12644 . - . ID=gene-CCO53_RS10215;Name=CCO53_RS10215;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10215;old_locus_tag=CCO53_10200 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 12569 12644 . - . ID=rna-CCO53_RS10215;Parent=gene-CCO53_RS10215;anticodon=(pos:complement(12609..12611));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10215;product=tRNA-Lys NZ_NPLZ01000005.1 tRNAscan-SE exon 12569 12644 . - . ID=exon-CCO53_RS10215-1;Parent=rna-CCO53_RS10215;anticodon=(pos:complement(12609..12611));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10215;product=tRNA-Lys NZ_NPLZ01000005.1 RefSeq gene 12787 12862 . - . ID=gene-CCO53_RS10220;Name=CCO53_RS10220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10220;old_locus_tag=CCO53_10205 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 12787 12862 . - . ID=rna-CCO53_RS10220;Parent=gene-CCO53_RS10220;anticodon=(pos:complement(12827..12829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10220;product=tRNA-Lys NZ_NPLZ01000005.1 tRNAscan-SE exon 12787 12862 . - . ID=exon-CCO53_RS10220-1;Parent=rna-CCO53_RS10220;anticodon=(pos:complement(12827..12829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10220;product=tRNA-Lys NZ_NPLZ01000005.1 RefSeq gene 12866 12941 . - . ID=gene-CCO53_RS10225;Name=CCO53_RS10225;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10225;old_locus_tag=CCO53_10210 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 12866 12941 . - . ID=rna-CCO53_RS10225;Parent=gene-CCO53_RS10225;anticodon=(pos:complement(12906..12908));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10225;product=tRNA-Val NZ_NPLZ01000005.1 tRNAscan-SE exon 12866 12941 . - . ID=exon-CCO53_RS10225-1;Parent=rna-CCO53_RS10225;anticodon=(pos:complement(12906..12908));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10225;product=tRNA-Val NZ_NPLZ01000005.1 RefSeq gene 13078 13153 . - . ID=gene-CCO53_RS10230;Name=CCO53_RS10230;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10230;old_locus_tag=CCO53_10215 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 13078 13153 . - . ID=rna-CCO53_RS10230;Parent=gene-CCO53_RS10230;anticodon=(pos:complement(13118..13120));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10230;product=tRNA-Lys NZ_NPLZ01000005.1 tRNAscan-SE exon 13078 13153 . - . ID=exon-CCO53_RS10230-1;Parent=rna-CCO53_RS10230;anticodon=(pos:complement(13118..13120));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10230;product=tRNA-Lys NZ_NPLZ01000005.1 RefSeq gene 13318 14106 . - . ID=gene-CCO53_RS10235;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=CCO53_RS10235;old_locus_tag=CCO53_10220 NZ_NPLZ01000005.1 Protein Homology CDS 13318 14106 . - 0 ID=cds-WP_094887660.1;Parent=gene-CCO53_RS10235;Dbxref=GenBank:WP_094887660.1;Name=WP_094887660.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=CCO53_RS10235;product=cell division protein CpoB;protein_id=WP_094887660.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 14116 14640 . - . ID=gene-CCO53_RS10240;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=CCO53_RS10240;old_locus_tag=CCO53_10225 NZ_NPLZ01000005.1 Protein Homology CDS 14116 14640 . - 0 ID=cds-WP_001176621.1;Parent=gene-CCO53_RS10240;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=CCO53_RS10240;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 14675 15967 . - . ID=gene-CCO53_RS10245;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=CCO53_RS10245;old_locus_tag=CCO53_10230 NZ_NPLZ01000005.1 Protein Homology CDS 14675 15967 . - 0 ID=cds-WP_001562341.1;Parent=gene-CCO53_RS10245;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=CCO53_RS10245;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 16091 17266 . - . ID=gene-CCO53_RS10250;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=CCO53_RS10250;old_locus_tag=CCO53_10235 NZ_NPLZ01000005.1 Protein Homology CDS 16091 17266 . - 0 ID=cds-WP_053258955.1;Parent=gene-CCO53_RS10250;Dbxref=GenBank:WP_053258955.1;Name=WP_053258955.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=CCO53_RS10250;product=cell envelope integrity protein TolA;protein_id=WP_053258955.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 17331 17759 . - . ID=gene-CCO53_RS10255;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=CCO53_RS10255;old_locus_tag=CCO53_10240 NZ_NPLZ01000005.1 Protein Homology CDS 17331 17759 . - 0 ID=cds-WP_000124676.1;Parent=gene-CCO53_RS10255;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=CCO53_RS10255;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 17763 18455 . - . ID=gene-CCO53_RS10260;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=CCO53_RS10260;old_locus_tag=CCO53_10245 NZ_NPLZ01000005.1 Protein Homology CDS 17763 18455 . - 0 ID=cds-WP_000131318.1;Parent=gene-CCO53_RS10260;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=CCO53_RS10260;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 18452 18856 . - . ID=gene-CCO53_RS10265;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=CCO53_RS10265;old_locus_tag=CCO53_10250 NZ_NPLZ01000005.1 Protein Homology CDS 18452 18856 . - 0 ID=cds-WP_001046240.1;Parent=gene-CCO53_RS10265;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=CCO53_RS10265;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 19085 19378 . - . ID=gene-CCO53_RS10270;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=CCO53_RS10270;old_locus_tag=CCO53_10255 NZ_NPLZ01000005.1 Protein Homology CDS 19085 19378 . - 0 ID=cds-WP_000148790.1;Parent=gene-CCO53_RS10270;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=CCO53_RS10270;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 19378 19491 . - . ID=gene-CCO53_RS10275;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=CCO53_RS10275;old_locus_tag=CCO53_10260 NZ_NPLZ01000005.1 Protein Homology CDS 19378 19491 . - 0 ID=cds-WP_000270278.1;Parent=gene-CCO53_RS10275;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=CCO53_RS10275;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 19506 20645 . - . ID=gene-CCO53_RS10280;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO53_RS10280;old_locus_tag=CCO53_10265 NZ_NPLZ01000005.1 Protein Homology CDS 19506 20645 . - 0 ID=cds-WP_000568258.1;Parent=gene-CCO53_RS10280;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=CCO53_RS10280;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 20661 22229 . - . ID=gene-CCO53_RS10285;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=CCO53_RS10285;old_locus_tag=CCO53_10270 NZ_NPLZ01000005.1 Protein Homology CDS 20661 22229 . - 0 ID=cds-WP_000884369.1;Parent=gene-CCO53_RS10285;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=CCO53_RS10285;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 23812 24681 . - . ID=gene-CCO53_RS10290;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CCO53_RS10290;old_locus_tag=CCO53_10275 NZ_NPLZ01000005.1 Protein Homology CDS 23812 24681 . - 0 ID=cds-WP_000114633.1;Parent=gene-CCO53_RS10290;Dbxref=GenBank:WP_000114633.1;Name=WP_000114633.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=CCO53_RS10290;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114633.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 24681 25847 . - . ID=gene-CCO53_RS10295;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CCO53_RS10295;old_locus_tag=CCO53_10280 NZ_NPLZ01000005.1 Protein Homology CDS 24681 25847 . - 0 ID=cds-WP_001048590.1;Parent=gene-CCO53_RS10295;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=CCO53_RS10295;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 25989 27197 . - . ID=gene-CCO53_RS10300;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=CCO53_RS10300;old_locus_tag=CCO53_10285 NZ_NPLZ01000005.1 Protein Homology CDS 25989 27197 . - 0 ID=cds-WP_094887661.1;Parent=gene-CCO53_RS10300;Dbxref=GenBank:WP_094887661.1;Name=WP_094887661.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=CCO53_RS10300;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_094887661.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 27212 30013 . - . ID=gene-CCO53_RS10305;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=CCO53_RS10305;old_locus_tag=CCO53_10290 NZ_NPLZ01000005.1 Protein Homology CDS 27212 30013 . - 0 ID=cds-WP_001181500.1;Parent=gene-CCO53_RS10305;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=CCO53_RS10305;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 30539 31255 . - . ID=gene-CCO53_RS10310;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CCO53_RS10310;old_locus_tag=CCO53_10295 NZ_NPLZ01000005.1 Protein Homology CDS 30539 31255 . - 0 ID=cds-WP_001537859.1;Parent=gene-CCO53_RS10310;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=CCO53_RS10310;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 31272 33038 . - . ID=gene-CCO53_RS10315;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CCO53_RS10315;old_locus_tag=CCO53_10300 NZ_NPLZ01000005.1 Protein Homology CDS 31272 33038 . - 0 ID=cds-WP_000775561.1;Parent=gene-CCO53_RS10315;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=CCO53_RS10315;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 33038 33385 . - . ID=gene-CCO53_RS10320;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=CCO53_RS10320;old_locus_tag=CCO53_10305 NZ_NPLZ01000005.1 Protein Homology CDS 33038 33385 . - 0 ID=cds-WP_000254356.1;Parent=gene-CCO53_RS10320;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=CCO53_RS10320;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 33379 33783 . - . ID=gene-CCO53_RS10325;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=CCO53_RS10325;old_locus_tag=CCO53_10310 NZ_NPLZ01000005.1 Protein Homology CDS 33379 33783 . - 0 ID=cds-WP_000263340.1;Parent=gene-CCO53_RS10325;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=CCO53_RS10325;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 34166 34297 . + . ID=gene-CCO53_RS24360;Name=CCO53_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24360 NZ_NPLZ01000005.1 Protein Homology CDS 34166 34297 . + 0 ID=cds-WP_418142699.1;Parent=gene-CCO53_RS24360;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=CCO53_RS24360;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 34523 35806 . + . ID=gene-CCO53_RS10340;Name=CCO53_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10340;old_locus_tag=CCO53_10325 NZ_NPLZ01000005.1 Protein Homology CDS 34523 35806 . + 0 ID=cds-WP_000785808.1;Parent=gene-CCO53_RS10340;Dbxref=GenBank:WP_000785808.1;Name=WP_000785808.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=CCO53_RS10340;product=citrate synthase;protein_id=WP_000785808.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 35942 36988 . + . ID=gene-CCO53_RS10345;Name=CCO53_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10345;old_locus_tag=CCO53_10330 NZ_NPLZ01000005.1 Protein Homology CDS 35942 36988 . + 0 ID=cds-WP_023201555.1;Parent=gene-CCO53_RS10345;Dbxref=GenBank:WP_023201555.1;Name=WP_023201555.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=CCO53_RS10345;product=AbrB family transcriptional regulator;protein_id=WP_023201555.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 37043 37834 . - . ID=gene-CCO53_RS10350;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=CCO53_RS10350;old_locus_tag=CCO53_10335 NZ_NPLZ01000005.1 Protein Homology CDS 37043 37834 . - 0 ID=cds-WP_001727712.1;Parent=gene-CCO53_RS10350;Dbxref=GenBank:WP_001727712.1;Name=WP_001727712.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=CCO53_RS10350;product=endonuclease VIII;protein_id=WP_001727712.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 37883 38020 . - . ID=gene-CCO53_RS10355;Name=CCO53_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10355;old_locus_tag=CCO53_10340 NZ_NPLZ01000005.1 Protein Homology CDS 37883 38020 . - 0 ID=cds-WP_001145917.1;Parent=gene-CCO53_RS10355;Dbxref=GenBank:WP_001145917.1;Name=WP_001145917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=CCO53_RS10355;product=hypothetical protein;protein_id=WP_001145917.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 38088 39983 . - . ID=gene-CCO53_RS10360;Name=CCO53_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10360;old_locus_tag=CCO53_10345 NZ_NPLZ01000005.1 Protein Homology CDS 38088 39983 . - 0 ID=cds-WP_077905107.1;Parent=gene-CCO53_RS10360;Dbxref=GenBank:WP_077905107.1;Name=WP_077905107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=CCO53_RS10360;product=HAD family hydrolase;protein_id=WP_077905107.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 40041 40874 . - . ID=gene-CCO53_RS10365;Name=CCO53_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10365;old_locus_tag=CCO53_10350 NZ_NPLZ01000005.1 Protein Homology CDS 40041 40874 . - 0 ID=cds-WP_094887662.1;Parent=gene-CCO53_RS10365;Dbxref=GenBank:WP_094887662.1;Name=WP_094887662.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=CCO53_RS10365;product=glycosyltransferase family A protein;protein_id=WP_094887662.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 41067 42845 . - . ID=gene-CCO53_RS10370;Name=CCO53_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10370;old_locus_tag=CCO53_10355 NZ_NPLZ01000005.1 Protein Homology CDS 41067 42845 . - 0 ID=cds-WP_080160317.1;Parent=gene-CCO53_RS10370;Dbxref=GenBank:WP_080160317.1;Name=WP_080160317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=CCO53_RS10370;product=glycosyltransferase;protein_id=WP_080160317.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 42939 43649 . - . ID=gene-CCO53_RS10375;Name=CCO53_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10375;old_locus_tag=CCO53_10360 NZ_NPLZ01000005.1 Protein Homology CDS 42939 43649 . - 0 ID=cds-WP_000702849.1;Parent=gene-CCO53_RS10375;Dbxref=GenBank:WP_000702849.1;Name=WP_000702849.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=CCO53_RS10375;product=ABC transporter ATP-binding protein;protein_id=WP_000702849.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 43653 44423 . - . ID=gene-CCO53_RS10380;Name=CCO53_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10380;old_locus_tag=CCO53_10365 NZ_NPLZ01000005.1 Protein Homology CDS 43653 44423 . - 0 ID=cds-WP_094887663.1;Parent=gene-CCO53_RS10380;Dbxref=GenBank:WP_094887663.1;Name=WP_094887663.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=CCO53_RS10380;product=ABC transporter permease;protein_id=WP_094887663.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 44552 45685 . - . ID=gene-CCO53_RS10385;Name=CCO53_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10385;old_locus_tag=CCO53_10370 NZ_NPLZ01000005.1 Protein Homology CDS 44552 45685 . - 0 ID=cds-WP_000824901.1;Parent=gene-CCO53_RS10385;Dbxref=GenBank:WP_000824901.1;Name=WP_000824901.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=CCO53_RS10385;product=glycosyltransferase family 4 protein;protein_id=WP_000824901.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 45698 46594 . - . ID=gene-CCO53_RS10390;Name=CCO53_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10390;old_locus_tag=CCO53_10375 NZ_NPLZ01000005.1 Protein Homology CDS 45698 46594 . - 0 ID=cds-WP_176456343.1;Parent=gene-CCO53_RS10390;Dbxref=GenBank:WP_176456343.1;Name=WP_176456343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=CCO53_RS10390;product=glycosyltransferase;protein_id=WP_176456343.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 46591 47742 . - . ID=gene-CCO53_RS10395;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=CCO53_RS10395;old_locus_tag=CCO53_10380 NZ_NPLZ01000005.1 Protein Homology CDS 46591 47742 . - 0 ID=cds-WP_001521816.1;Parent=gene-CCO53_RS10395;Dbxref=GenBank:WP_001521816.1;Name=WP_001521816.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=CCO53_RS10395;product=UDP-galactopyranose mutase;protein_id=WP_001521816.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 48028 48768 . - . ID=gene-CCO53_RS10400;Name=CCO53_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10400;old_locus_tag=CCO53_10385 NZ_NPLZ01000005.1 Protein Homology CDS 48028 48768 . - 0 ID=cds-WP_001194237.1;Parent=gene-CCO53_RS10400;Dbxref=GenBank:WP_001194237.1;Name=WP_001194237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=CCO53_RS10400;product=hypothetical protein;protein_id=WP_001194237.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 48770 49105 . - . ID=gene-CCO53_RS10405;Name=CCO53_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10405;old_locus_tag=CCO53_10390 NZ_NPLZ01000005.1 Protein Homology CDS 48770 49105 . - 0 ID=cds-WP_001182680.1;Parent=gene-CCO53_RS10405;Dbxref=GenBank:WP_001182680.1;Name=WP_001182680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=CCO53_RS10405;product=hypothetical protein;protein_id=WP_001182680.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 49565 50131 . - . ID=gene-CCO53_RS10410;Name=CCO53_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10410;old_locus_tag=CCO53_10395 NZ_NPLZ01000005.1 Protein Homology CDS 49565 50131 . - 0 ID=cds-WP_000824704.1;Parent=gene-CCO53_RS10410;Dbxref=GenBank:WP_000824704.1;Name=WP_000824704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=CCO53_RS10410;product=tyrosine-type DNA invertase;protein_id=WP_000824704.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 50191 50322 . - . ID=gene-CCO53_RS10415;Name=CCO53_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10415;old_locus_tag=CCO53_10400 NZ_NPLZ01000005.1 Protein Homology CDS 50191 50322 . - 0 ID=cds-WP_001521652.1;Parent=gene-CCO53_RS10415;Dbxref=GenBank:WP_001521652.1;Name=WP_001521652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=CCO53_RS10415;product=hypothetical protein;protein_id=WP_001521652.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 50646 51380 . - . ID=gene-CCO53_RS10420;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CCO53_RS10420;old_locus_tag=CCO53_10405 NZ_NPLZ01000005.1 Protein Homology CDS 50646 51380 . - 0 ID=cds-WP_017441681.1;Parent=gene-CCO53_RS10420;Dbxref=GenBank:WP_017441681.1;Name=WP_017441681.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=CCO53_RS10420;product=5-oxoprolinase subunit PxpA;protein_id=WP_017441681.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 51370 52302 . - . ID=gene-CCO53_RS10425;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=CCO53_RS10425;old_locus_tag=CCO53_10410 NZ_NPLZ01000005.1 Protein Homology CDS 51370 52302 . - 0 ID=cds-WP_000932043.1;Parent=gene-CCO53_RS10425;Dbxref=GenBank:WP_000932043.1;Name=WP_000932043.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=CCO53_RS10425;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932043.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 52296 52952 . - . ID=gene-CCO53_RS10430;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CCO53_RS10430;old_locus_tag=CCO53_10415 NZ_NPLZ01000005.1 Protein Homology CDS 52296 52952 . - 0 ID=cds-WP_001188371.1;Parent=gene-CCO53_RS10430;Dbxref=GenBank:WP_001188371.1;Name=WP_001188371.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=CCO53_RS10430;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188371.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 52968 53711 . - . ID=gene-CCO53_RS10435;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=CCO53_RS10435;old_locus_tag=CCO53_10420 NZ_NPLZ01000005.1 Protein Homology CDS 52968 53711 . - 0 ID=cds-WP_000798844.1;Parent=gene-CCO53_RS10435;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=CCO53_RS10435;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 54040 55521 . + . ID=gene-CCO53_RS10445;Name=CCO53_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10445;old_locus_tag=CCO53_10430 NZ_NPLZ01000005.1 Protein Homology CDS 54040 55521 . + 0 ID=cds-WP_001041123.1;Parent=gene-CCO53_RS10445;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=CCO53_RS10445;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 55560 56981 . - . ID=gene-CCO53_RS10450;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=CCO53_RS10450;old_locus_tag=CCO53_10435 NZ_NPLZ01000005.1 Protein Homology CDS 55560 56981 . - 0 ID=cds-WP_058331927.1;Parent=gene-CCO53_RS10450;Dbxref=GenBank:WP_058331927.1;Name=WP_058331927.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465559.1;locus_tag=CCO53_RS10450;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_058331927.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 57092 57298 . - . ID=gene-CCO53_RS10455;Name=CCO53_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10455;old_locus_tag=CCO53_10440 NZ_NPLZ01000005.1 Protein Homology CDS 57092 57298 . - 0 ID=cds-WP_000401433.1;Parent=gene-CCO53_RS10455;Dbxref=GenBank:WP_000401433.1;Name=WP_000401433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=CCO53_RS10455;product=YbfA family protein;protein_id=WP_000401433.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 57635 57724 . + . ID=gene-CCO53_RS10460;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CCO53_RS10460;old_locus_tag=CCO53_10445 NZ_NPLZ01000005.1 Protein Homology CDS 57635 57724 . + 0 ID=cds-WP_001670793.1;Parent=gene-CCO53_RS10460;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=CCO53_RS10460;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 57724 59403 . + . ID=gene-CCO53_RS10465;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CCO53_RS10465;old_locus_tag=CCO53_10450 NZ_NPLZ01000005.1 Protein Homology CDS 57724 59403 . + 0 ID=cds-WP_000730078.1;Parent=gene-CCO53_RS10465;Dbxref=GenBank:WP_000730078.1;Name=WP_000730078.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=CCO53_RS10465;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730078.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 59424 61472 . + . ID=gene-CCO53_RS10470;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CCO53_RS10470;old_locus_tag=CCO53_10455 NZ_NPLZ01000005.1 Protein Homology CDS 59424 61472 . + 0 ID=cds-WP_000088034.1;Parent=gene-CCO53_RS10470;Dbxref=GenBank:WP_000088034.1;Name=WP_000088034.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=CCO53_RS10470;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088034.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 61481 62065 . + . ID=gene-CCO53_RS10475;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CCO53_RS10475;old_locus_tag=CCO53_10460 NZ_NPLZ01000005.1 Protein Homology CDS 61481 62065 . + 0 ID=cds-WP_000579804.1;Parent=gene-CCO53_RS10475;Dbxref=GenBank:WP_000579804.1;Name=WP_000579804.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=CCO53_RS10475;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_000579804.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 62062 64746 . + . ID=gene-CCO53_RS10480;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=CCO53_RS10480;old_locus_tag=CCO53_10465 NZ_NPLZ01000005.1 Protein Homology CDS 62062 64746 . + 0 ID=cds-WP_000997489.1;Parent=gene-CCO53_RS10480;Dbxref=GenBank:WP_000997489.1;Name=WP_000997489.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=CCO53_RS10480;product=two-component system sensor histidine kinase KdpD;protein_id=WP_000997489.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 64743 65420 . + . ID=gene-CCO53_RS10485;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=CCO53_RS10485;old_locus_tag=CCO53_10470 NZ_NPLZ01000005.1 Protein Homology CDS 64743 65420 . + 0 ID=cds-WP_000186053.1;Parent=gene-CCO53_RS10485;Dbxref=GenBank:WP_000186053.1;Name=WP_000186053.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=CCO53_RS10485;product=two-component system response regulator KdpE;protein_id=WP_000186053.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 65698 65802 . + . ID=gene-CCO53_RS23660;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=CCO53_RS23660 NZ_NPLZ01000005.1 Protein Homology CDS 65698 65802 . + 0 ID=cds-WP_015632840.1;Parent=gene-CCO53_RS23660;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=CCO53_RS23660;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 66182 68380 . + . ID=gene-CCO53_RS10490;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=CCO53_RS10490;old_locus_tag=CCO53_10475 NZ_NPLZ01000005.1 Protein Homology CDS 66182 68380 . + 0 ID=cds-WP_023202341.1;Parent=gene-CCO53_RS10490;Dbxref=GenBank:WP_023202341.1;Name=WP_023202341.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=CCO53_RS10490;product=ornithine decarboxylase SpeF;protein_id=WP_023202341.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 68377 69696 . + . ID=gene-CCO53_RS10495;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=CCO53_RS10495;old_locus_tag=CCO53_10480 NZ_NPLZ01000005.1 Protein Homology CDS 68377 69696 . + 0 ID=cds-WP_000042658.1;Parent=gene-CCO53_RS10495;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=CCO53_RS10495;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 69761 70246 . + . ID=gene-CCO53_RS10500;Name=CCO53_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10500;old_locus_tag=CCO53_10485 NZ_NPLZ01000005.1 Protein Homology CDS 69761 70246 . + 0 ID=cds-WP_000070053.1;Parent=gene-CCO53_RS10500;Dbxref=GenBank:WP_000070053.1;Name=WP_000070053.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=CCO53_RS10500;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070053.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 70361 72001 . - . ID=gene-CCO53_RS10505;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=CCO53_RS10505;old_locus_tag=CCO53_10490 NZ_NPLZ01000005.1 Protein Homology CDS 70361 72001 . - 0 ID=cds-WP_053299976.1;Parent=gene-CCO53_RS10505;Dbxref=GenBank:WP_053299976.1;Name=WP_053299976.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=CCO53_RS10505;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_053299976.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 72026 72568 . - . ID=gene-CCO53_RS10510;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=CCO53_RS10510;old_locus_tag=CCO53_10495 NZ_NPLZ01000005.1 Protein Homology CDS 72026 72568 . - 0 ID=cds-WP_000848395.1;Parent=gene-CCO53_RS10510;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=CCO53_RS10510;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 72753 73523 . + . ID=gene-CCO53_RS10515;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=CCO53_RS10515;old_locus_tag=CCO53_10500 NZ_NPLZ01000005.1 Protein Homology CDS 72753 73523 . + 0 ID=cds-WP_000773245.1;Parent=gene-CCO53_RS10515;Dbxref=GenBank:WP_000773245.1;Name=WP_000773245.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=CCO53_RS10515;product=esterase;protein_id=WP_000773245.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 73657 73950 . + . ID=gene-CCO53_RS10520;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=CCO53_RS10520;old_locus_tag=CCO53_10505 NZ_NPLZ01000005.1 Protein Homology CDS 73657 73950 . + 0 ID=cds-WP_001040939.1;Parent=gene-CCO53_RS10520;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=CCO53_RS10520;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 74101 74631 . + . ID=gene-CCO53_RS10525;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=CCO53_RS10525;old_locus_tag=CCO53_10510 NZ_NPLZ01000005.1 Protein Homology CDS 74101 74631 . + 0 ID=cds-WP_001018621.1;Parent=gene-CCO53_RS10525;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=CCO53_RS10525;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq pseudogene 74835 74920 . + . ID=gene-CCO53_RS23885;Name=CCO53_RS23885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23885;pseudo=true NZ_NPLZ01000005.1 Protein Homology CDS 74835 74920 . + 0 ID=cds-CCO53_RS23885;Parent=gene-CCO53_RS23885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=CCO53_RS23885;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 74913 75365 . + . ID=gene-CCO53_RS10530;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CCO53_RS10530;old_locus_tag=CCO53_10515 NZ_NPLZ01000005.1 Protein Homology CDS 74913 75365 . + 0 ID=cds-WP_000131699.1;Parent=gene-CCO53_RS10530;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=CCO53_RS10530;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 75480 76406 . + . ID=gene-CCO53_RS10535;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=CCO53_RS10535;old_locus_tag=CCO53_10520 NZ_NPLZ01000005.1 Protein Homology CDS 75480 76406 . + 0 ID=cds-WP_000423371.1;Parent=gene-CCO53_RS10535;Dbxref=GenBank:WP_000423371.1;Name=WP_000423371.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=CCO53_RS10535;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423371.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 76504 77907 . + . ID=gene-CCO53_RS10540;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=CCO53_RS10540;old_locus_tag=CCO53_10525 NZ_NPLZ01000005.1 Protein Homology CDS 76504 77907 . + 0 ID=cds-WP_000228705.1;Parent=gene-CCO53_RS10540;Dbxref=GenBank:WP_000228705.1;Name=WP_000228705.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=CCO53_RS10540;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228705.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 77894 79033 . + . ID=gene-CCO53_RS10545;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=CCO53_RS10545;old_locus_tag=CCO53_10530 NZ_NPLZ01000005.1 Protein Homology CDS 77894 79033 . + 0 ID=cds-WP_000811146.1;Parent=gene-CCO53_RS10545;Dbxref=GenBank:WP_000811146.1;Name=WP_000811146.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=CCO53_RS10545;product=tricarballylate utilization protein TcuB;protein_id=WP_000811146.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 79084 80388 . + . ID=gene-CCO53_RS10550;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=CCO53_RS10550;old_locus_tag=CCO53_10535 NZ_NPLZ01000005.1 Protein Homology CDS 79084 80388 . + 0 ID=cds-WP_000057014.1;Parent=gene-CCO53_RS10550;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=CCO53_RS10550;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 80437 80769 . - . ID=gene-CCO53_RS10555;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=CCO53_RS10555;old_locus_tag=CCO53_10540 NZ_NPLZ01000005.1 Protein Homology CDS 80437 80769 . - 0 ID=cds-WP_000722260.1;Parent=gene-CCO53_RS10555;Dbxref=GenBank:WP_000722260.1;Name=WP_000722260.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=CCO53_RS10555;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722260.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 80819 82225 . - . ID=gene-CCO53_RS10560;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=CCO53_RS10560;old_locus_tag=CCO53_10545 NZ_NPLZ01000005.1 Protein Homology CDS 80819 82225 . - 0 ID=cds-WP_001258803.1;Parent=gene-CCO53_RS10560;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=CCO53_RS10560;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 82825 84492 . - . ID=gene-CCO53_RS10575;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=CCO53_RS10575;old_locus_tag=CCO53_10560 NZ_NPLZ01000005.1 Protein Homology CDS 82825 84492 . - 0 ID=cds-WP_001287186.1;Parent=gene-CCO53_RS10575;Dbxref=GenBank:WP_001287186.1;Name=WP_001287186.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=CCO53_RS10575;product=glutamine--tRNA ligase;protein_id=WP_001287186.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 84703 86655 . - . ID=gene-CCO53_RS10580;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=CCO53_RS10580;old_locus_tag=CCO53_10565 NZ_NPLZ01000005.1 Protein Homology CDS 84703 86655 . - 0 ID=cds-WP_001023069.1;Parent=gene-CCO53_RS10580;Dbxref=GenBank:WP_001023069.1;Name=WP_001023069.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=CCO53_RS10580;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023069.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 86982 87782 . + . ID=gene-CCO53_RS10585;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CCO53_RS10585;old_locus_tag=CCO53_10570 NZ_NPLZ01000005.1 Protein Homology CDS 86982 87782 . + 0 ID=cds-WP_001237060.1;Parent=gene-CCO53_RS10585;Dbxref=GenBank:WP_001237060.1;Name=WP_001237060.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=CCO53_RS10585;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237060.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 87842 88996 . + . ID=gene-CCO53_RS10590;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CCO53_RS10590;old_locus_tag=CCO53_10575 NZ_NPLZ01000005.1 Protein Homology CDS 87842 88996 . + 0 ID=cds-WP_020839480.1;Parent=gene-CCO53_RS10590;Dbxref=GenBank:WP_020839480.1;Name=WP_020839480.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=CCO53_RS10590;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_020839480.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 89001 90221 . + . ID=gene-CCO53_RS10595;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=CCO53_RS10595;old_locus_tag=CCO53_10580 NZ_NPLZ01000005.1 Protein Homology CDS 89001 90221 . + 0 ID=cds-WP_000187578.1;Parent=gene-CCO53_RS10595;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=CCO53_RS10595;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 90268 91020 . + . ID=gene-CCO53_RS10600;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=CCO53_RS10600;old_locus_tag=CCO53_10585 NZ_NPLZ01000005.1 Protein Homology CDS 90268 91020 . + 0 ID=cds-WP_000153143.1;Parent=gene-CCO53_RS10600;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=CCO53_RS10600;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 91310 92974 . + . ID=gene-CCO53_RS10610;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=CCO53_RS10610;old_locus_tag=CCO53_10595 NZ_NPLZ01000005.1 Protein Homology CDS 91310 92974 . + 0 ID=cds-WP_000337034.1;Parent=gene-CCO53_RS10610;Dbxref=GenBank:WP_000337034.1;Name=WP_000337034.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=CCO53_RS10610;product=asparagine synthase B;protein_id=WP_000337034.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 93196 93272 . + . ID=gene-CCO53_RS10615;Name=CCO53_RS10615;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10615;old_locus_tag=CCO53_10600 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 93196 93272 . + . ID=rna-CCO53_RS10615;Parent=gene-CCO53_RS10615;anticodon=(pos:93230..93232);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10615;product=tRNA-Met NZ_NPLZ01000005.1 tRNAscan-SE exon 93196 93272 . + . ID=exon-CCO53_RS10615-1;Parent=rna-CCO53_RS10615;anticodon=(pos:93230..93232);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10615;product=tRNA-Met NZ_NPLZ01000005.1 RefSeq gene 93281 93365 . + . ID=gene-CCO53_RS10620;Name=CCO53_RS10620;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10620;old_locus_tag=CCO53_10605 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 93281 93365 . + . ID=rna-CCO53_RS10620;Parent=gene-CCO53_RS10620;anticodon=(pos:93315..93317);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10620;product=tRNA-Leu NZ_NPLZ01000005.1 tRNAscan-SE exon 93281 93365 . + . ID=exon-CCO53_RS10620-1;Parent=rna-CCO53_RS10620;anticodon=(pos:93315..93317);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10620;product=tRNA-Leu NZ_NPLZ01000005.1 RefSeq gene 93389 93463 . + . ID=gene-CCO53_RS10625;Name=CCO53_RS10625;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10625;old_locus_tag=CCO53_10610 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 93389 93463 . + . ID=rna-CCO53_RS10625;Parent=gene-CCO53_RS10625;anticodon=(pos:93421..93423);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10625;product=tRNA-Gln NZ_NPLZ01000005.1 tRNAscan-SE exon 93389 93463 . + . ID=exon-CCO53_RS10625-1;Parent=rna-CCO53_RS10625;anticodon=(pos:93421..93423);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10625;product=tRNA-Gln NZ_NPLZ01000005.1 RefSeq gene 93499 93573 . + . ID=gene-CCO53_RS10630;Name=CCO53_RS10630;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10630;old_locus_tag=CCO53_10615 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 93499 93573 . + . ID=rna-CCO53_RS10630;Parent=gene-CCO53_RS10630;anticodon=(pos:93531..93533);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10630;product=tRNA-Gln NZ_NPLZ01000005.1 tRNAscan-SE exon 93499 93573 . + . ID=exon-CCO53_RS10630-1;Parent=rna-CCO53_RS10630;anticodon=(pos:93531..93533);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10630;product=tRNA-Gln NZ_NPLZ01000005.1 RefSeq gene 93589 93665 . + . ID=gene-CCO53_RS10635;Name=CCO53_RS10635;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10635;old_locus_tag=CCO53_10620 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 93589 93665 . + . ID=rna-CCO53_RS10635;Parent=gene-CCO53_RS10635;anticodon=(pos:93623..93625);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10635;product=tRNA-Met NZ_NPLZ01000005.1 tRNAscan-SE exon 93589 93665 . + . ID=exon-CCO53_RS10635-1;Parent=rna-CCO53_RS10635;anticodon=(pos:93623..93625);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10635;product=tRNA-Met NZ_NPLZ01000005.1 RefSeq gene 93712 93786 . + . ID=gene-CCO53_RS10640;Name=CCO53_RS10640;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10640;old_locus_tag=CCO53_10625 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 93712 93786 . + . ID=rna-CCO53_RS10640;Parent=gene-CCO53_RS10640;anticodon=(pos:93744..93746);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10640;product=tRNA-Gln NZ_NPLZ01000005.1 tRNAscan-SE exon 93712 93786 . + . ID=exon-CCO53_RS10640-1;Parent=rna-CCO53_RS10640;anticodon=(pos:93744..93746);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10640;product=tRNA-Gln NZ_NPLZ01000005.1 RefSeq gene 93830 93904 . + . ID=gene-CCO53_RS10645;Name=CCO53_RS10645;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS10645;old_locus_tag=CCO53_10630 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 93830 93904 . + . ID=rna-CCO53_RS10645;Parent=gene-CCO53_RS10645;anticodon=(pos:93862..93864);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10645;product=tRNA-Gln NZ_NPLZ01000005.1 tRNAscan-SE exon 93830 93904 . + . ID=exon-CCO53_RS10645-1;Parent=rna-CCO53_RS10645;anticodon=(pos:93862..93864);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS10645;product=tRNA-Gln NZ_NPLZ01000005.1 RefSeq gene 94040 94615 . + . ID=gene-CCO53_RS10650;Name=CCO53_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10650;old_locus_tag=CCO53_10635 NZ_NPLZ01000005.1 Protein Homology CDS 94040 94615 . + 0 ID=cds-WP_094887664.1;Parent=gene-CCO53_RS10650;Dbxref=GenBank:WP_094887664.1;Name=WP_094887664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459664.1;locus_tag=CCO53_RS10650;product=hypothetical protein;protein_id=WP_094887664.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 94682 95857 . - . ID=gene-CCO53_RS10655;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=CCO53_RS10655;old_locus_tag=CCO53_10640 NZ_NPLZ01000005.1 Protein Homology CDS 94682 95857 . - 0 ID=cds-WP_094887665.1;Parent=gene-CCO53_RS10655;Dbxref=GenBank:WP_094887665.1;Name=WP_094887665.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=CCO53_RS10655;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_094887665.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 96001 97425 . + . ID=gene-CCO53_RS10660;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CCO53_RS10660;old_locus_tag=CCO53_10645 NZ_NPLZ01000005.1 Protein Homology CDS 96001 97425 . + 0 ID=cds-WP_080194411.1;Parent=gene-CCO53_RS10660;Dbxref=GenBank:WP_080194411.1;Name=WP_080194411.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=CCO53_RS10660;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_080194411.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 97630 98676 . + . ID=gene-CCO53_RS10665;Name=CCO53_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10665;old_locus_tag=CCO53_10650 NZ_NPLZ01000005.1 Protein Homology CDS 97630 98676 . + 0 ID=cds-WP_001018045.1;Parent=gene-CCO53_RS10665;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=CCO53_RS10665;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 98673 99146 . + . ID=gene-CCO53_RS10670;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CCO53_RS10670;old_locus_tag=CCO53_10655 NZ_NPLZ01000005.1 Protein Homology CDS 98673 99146 . + 0 ID=cds-WP_000084477.1;Parent=gene-CCO53_RS10670;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=CCO53_RS10670;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 99304 100182 . + . ID=gene-CCO53_RS10675;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=CCO53_RS10675;old_locus_tag=CCO53_10660 NZ_NPLZ01000005.1 Protein Homology CDS 99304 100182 . + 0 ID=cds-WP_001278615.1;Parent=gene-CCO53_RS10675;Dbxref=GenBank:WP_001278615.1;Name=WP_001278615.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=CCO53_RS10675;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 100202 101740 . + . ID=gene-CCO53_RS10680;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=CCO53_RS10680;old_locus_tag=CCO53_10665 NZ_NPLZ01000005.1 Protein Homology CDS 100202 101740 . + 0 ID=cds-WP_024134114.1;Parent=gene-CCO53_RS10680;Dbxref=GenBank:WP_024134114.1;Name=WP_024134114.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=CCO53_RS10680;product=apolipoprotein N-acyltransferase;protein_id=WP_024134114.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 102158 103066 . + . ID=gene-CCO53_RS10685;Name=CCO53_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10685;old_locus_tag=CCO53_10670 NZ_NPLZ01000005.1 Protein Homology CDS 102158 103066 . + 0 ID=cds-WP_001518176.1;Parent=gene-CCO53_RS10685;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=CCO53_RS10685;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 103226 103966 . + . ID=gene-CCO53_RS10690;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=CCO53_RS10690;old_locus_tag=CCO53_10675 NZ_NPLZ01000005.1 Protein Homology CDS 103226 103966 . + 0 ID=cds-WP_000020930.1;Parent=gene-CCO53_RS10690;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=CCO53_RS10690;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 103966 104640 . + . ID=gene-CCO53_RS10695;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=CCO53_RS10695;old_locus_tag=CCO53_10680 NZ_NPLZ01000005.1 Protein Homology CDS 103966 104640 . + 0 ID=cds-WP_000272799.1;Parent=gene-CCO53_RS10695;Dbxref=GenBank:WP_000272799.1;Name=WP_000272799.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=CCO53_RS10695;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272799.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 104640 105365 . + . ID=gene-CCO53_RS10700;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=CCO53_RS10700;old_locus_tag=CCO53_10685 NZ_NPLZ01000005.1 Protein Homology CDS 104640 105365 . + 0 ID=cds-WP_080198144.1;Parent=gene-CCO53_RS10700;Dbxref=GenBank:WP_080198144.1;Name=WP_080198144.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=CCO53_RS10700;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_080198144.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 105482 106417 . + . ID=gene-CCO53_RS10705;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=CCO53_RS10705;old_locus_tag=CCO53_10690 NZ_NPLZ01000005.1 Protein Homology CDS 105482 106417 . + 0 ID=cds-WP_080198145.1;Parent=gene-CCO53_RS10705;Dbxref=GenBank:WP_080198145.1;Name=WP_080198145.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=CCO53_RS10705;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_080198145.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 106449 107687 . + . ID=gene-CCO53_RS10710;Name=CCO53_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10710;old_locus_tag=CCO53_10695 NZ_NPLZ01000005.1 Protein Homology CDS 106449 107687 . + 0 ID=cds-WP_000498865.1;Parent=gene-CCO53_RS10710;Dbxref=GenBank:WP_000498865.1;Name=WP_000498865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=CCO53_RS10710;product=hypothetical protein;protein_id=WP_000498865.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 107763 109442 . + . ID=gene-CCO53_RS10715;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=CCO53_RS10715;old_locus_tag=CCO53_10700 NZ_NPLZ01000005.1 Protein Homology CDS 107763 109442 . + 0 ID=cds-WP_000368035.1;Parent=gene-CCO53_RS10715;Dbxref=GenBank:WP_000368035.1;Name=WP_000368035.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=CCO53_RS10715;product=molecular chaperone HscC;protein_id=WP_000368035.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 109464 110927 . - . ID=gene-CCO53_RS10720;Name=CCO53_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10720;old_locus_tag=CCO53_10705 NZ_NPLZ01000005.1 Protein Homology CDS 109464 110927 . - 0 ID=cds-WP_023201917.1;Parent=gene-CCO53_RS10720;Dbxref=GenBank:WP_023201917.1;Name=WP_023201917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=CCO53_RS10720;product=J domain-containing protein;protein_id=WP_023201917.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 110924 111628 . - . ID=gene-CCO53_RS10725;Name=CCO53_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10725;old_locus_tag=CCO53_10710 NZ_NPLZ01000005.1 Protein Homology CDS 110924 111628 . - 0 ID=cds-WP_000356618.1;Parent=gene-CCO53_RS10725;Dbxref=GenBank:WP_000356618.1;Name=WP_000356618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=CCO53_RS10725;product=DUF1266 domain-containing protein;protein_id=WP_000356618.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 111640 113073 . - . ID=gene-CCO53_RS10730;Name=CCO53_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10730;old_locus_tag=CCO53_10715 NZ_NPLZ01000005.1 Protein Homology CDS 111640 113073 . - 0 ID=cds-WP_094882324.1;Parent=gene-CCO53_RS10730;Dbxref=GenBank:WP_094882324.1;Name=WP_094882324.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=CCO53_RS10730;product=J domain-containing protein;protein_id=WP_094882324.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 113070 113777 . - . ID=gene-CCO53_RS10735;Name=CCO53_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10735;old_locus_tag=CCO53_10720 NZ_NPLZ01000005.1 Protein Homology CDS 113070 113777 . - 0 ID=cds-WP_001534204.1;Parent=gene-CCO53_RS10735;Dbxref=GenBank:WP_001534204.1;Name=WP_001534204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=CCO53_RS10735;product=DUF1266 domain-containing protein;protein_id=WP_001534204.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 113902 114900 . + . ID=gene-CCO53_RS10740;Name=CCO53_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10740;old_locus_tag=CCO53_10725 NZ_NPLZ01000005.1 Protein Homology CDS 113902 114900 . + 0 ID=cds-WP_094882323.1;Parent=gene-CCO53_RS10740;Dbxref=GenBank:WP_094882323.1;Name=WP_094882323.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=CCO53_RS10740;product=tetratricopeptide repeat protein;protein_id=WP_094882323.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 114929 115870 . - . ID=gene-CCO53_RS10745;Name=CCO53_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10745;old_locus_tag=CCO53_10730 NZ_NPLZ01000005.1 Protein Homology CDS 114929 115870 . - 0 ID=cds-WP_094882322.1;Parent=gene-CCO53_RS10745;Dbxref=GenBank:WP_094882322.1;Name=WP_094882322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100314.1;locus_tag=CCO53_RS10745;product=hypothetical protein;protein_id=WP_094882322.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 115952 116425 . - . ID=gene-CCO53_RS10750;Name=CCO53_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10750;old_locus_tag=CCO53_10735 NZ_NPLZ01000005.1 Protein Homology CDS 115952 116425 . - 0 ID=cds-WP_001044885.1;Parent=gene-CCO53_RS10750;Dbxref=GenBank:WP_001044885.1;Name=WP_001044885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=CCO53_RS10750;product=zinc ribbon-containing protein;protein_id=WP_001044885.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 116518 118446 . - . ID=gene-CCO53_RS10755;Name=CCO53_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10755;old_locus_tag=CCO53_10740 NZ_NPLZ01000005.1 Protein Homology CDS 116518 118446 . - 0 ID=cds-WP_076726256.1;Parent=gene-CCO53_RS10755;Dbxref=GenBank:WP_076726256.1;Name=WP_076726256.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=CCO53_RS10755;product=sigma-54 interaction domain-containing protein;protein_id=WP_076726256.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 118514 119467 . - . ID=gene-CCO53_RS10760;Name=CCO53_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10760;old_locus_tag=CCO53_10745 NZ_NPLZ01000005.1 Protein Homology CDS 118514 119467 . - 0 ID=cds-WP_000694477.1;Parent=gene-CCO53_RS10760;Dbxref=GenBank:WP_000694477.1;Name=WP_000694477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=CCO53_RS10760;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694477.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 119517 120689 . - . ID=gene-CCO53_RS10765;Name=CCO53_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10765;old_locus_tag=CCO53_10750 NZ_NPLZ01000005.1 Protein Homology CDS 119517 120689 . - 0 ID=cds-WP_001670689.1;Parent=gene-CCO53_RS10765;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=CCO53_RS10765;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 120706 121047 . - . ID=gene-CCO53_RS10770;Name=CCO53_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10770;old_locus_tag=CCO53_10755 NZ_NPLZ01000005.1 Protein Homology CDS 120706 121047 . - 0 ID=cds-WP_015632837.1;Parent=gene-CCO53_RS10770;Dbxref=GenBank:WP_015632837.1;Name=WP_015632837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=CCO53_RS10770;product=UxaA family hydrolase;protein_id=WP_015632837.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 121284 123866 . + . ID=gene-CCO53_RS10775;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CCO53_RS10775;old_locus_tag=CCO53_10760 NZ_NPLZ01000005.1 Protein Homology CDS 121284 123866 . + 0 ID=cds-WP_001157916.1;Parent=gene-CCO53_RS10775;Dbxref=GenBank:WP_001157916.1;Name=WP_001157916.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=CCO53_RS10775;product=leucine--tRNA ligase;protein_id=WP_001157916.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 123881 124471 . + . ID=gene-CCO53_RS10780;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=CCO53_RS10780;old_locus_tag=CCO53_10765 NZ_NPLZ01000005.1 Protein Homology CDS 123881 124471 . + 0 ID=cds-WP_001269950.1;Parent=gene-CCO53_RS10780;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=CCO53_RS10780;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 124471 125502 . + . ID=gene-CCO53_RS10785;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CCO53_RS10785;old_locus_tag=CCO53_10770 NZ_NPLZ01000005.1 Protein Homology CDS 124471 125502 . + 0 ID=cds-WP_000620491.1;Parent=gene-CCO53_RS10785;Dbxref=GenBank:WP_000620491.1;Name=WP_000620491.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=CCO53_RS10785;product=DNA polymerase III subunit delta;protein_id=WP_000620491.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 125504 126145 . + . ID=gene-CCO53_RS10790;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CCO53_RS10790;old_locus_tag=CCO53_10775 NZ_NPLZ01000005.1 Protein Homology CDS 125504 126145 . + 0 ID=cds-WP_001518902.1;Parent=gene-CCO53_RS10790;Dbxref=GenBank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=CCO53_RS10790;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 126120 127214 . - . ID=gene-CCO53_RS10795;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CCO53_RS10795;old_locus_tag=CCO53_10780 NZ_NPLZ01000005.1 Protein Homology CDS 126120 127214 . - 0 ID=cds-WP_058331939.1;Parent=gene-CCO53_RS10795;Dbxref=GenBank:WP_058331939.1;Name=WP_058331939.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=CCO53_RS10795;product=threonine-phosphate decarboxylase CobD;protein_id=WP_058331939.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 127311 127919 . + . ID=gene-CCO53_RS10800;Name=CCO53_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10800;old_locus_tag=CCO53_10785 NZ_NPLZ01000005.1 Protein Homology CDS 127311 127919 . + 0 ID=cds-WP_080160310.1;Parent=gene-CCO53_RS10800;Dbxref=GenBank:WP_080160310.1;Name=WP_080160310.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=CCO53_RS10800;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_080160310.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 128248 128565 . + . ID=gene-CCO53_RS10805;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CCO53_RS10805;old_locus_tag=CCO53_10790 NZ_NPLZ01000005.1 Protein Homology CDS 128248 128565 . + 0 ID=cds-WP_001161670.1;Parent=gene-CCO53_RS10805;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=CCO53_RS10805;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 128569 129036 . + . ID=gene-CCO53_RS10810;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CCO53_RS10810;old_locus_tag=CCO53_10795 NZ_NPLZ01000005.1 Protein Homology CDS 128569 129036 . + 0 ID=cds-WP_000776107.1;Parent=gene-CCO53_RS10810;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=CCO53_RS10810;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 129067 130968 . + . ID=gene-CCO53_RS10815;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO53_RS10815;old_locus_tag=CCO53_10800 NZ_NPLZ01000005.1 Protein Homology CDS 129067 130968 . + 0 ID=cds-WP_000828700.1;Parent=gene-CCO53_RS10815;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=CCO53_RS10815;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 130971 132083 . + . ID=gene-CCO53_RS10820;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=CCO53_RS10820;old_locus_tag=CCO53_10805 NZ_NPLZ01000005.1 Protein Homology CDS 130971 132083 . + 0 ID=cds-WP_000131713.1;Parent=gene-CCO53_RS10820;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=CCO53_RS10820;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 132094 133227 . + . ID=gene-CCO53_RS10825;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=CCO53_RS10825;old_locus_tag=CCO53_10810 NZ_NPLZ01000005.1 Protein Homology CDS 132094 133227 . + 0 ID=cds-WP_094887666.1;Parent=gene-CCO53_RS10825;Dbxref=GenBank:WP_094887666.1;Name=WP_094887666.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=CCO53_RS10825;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_094887666.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 133367 134578 . + . ID=gene-CCO53_RS10830;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=CCO53_RS10830;old_locus_tag=CCO53_10815 NZ_NPLZ01000005.1 Protein Homology CDS 133367 134578 . + 0 ID=cds-WP_000858711.1;Parent=gene-CCO53_RS10830;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=CCO53_RS10830;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 134686 134949 . + . ID=gene-CCO53_RS10835;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=CCO53_RS10835;old_locus_tag=CCO53_10820 NZ_NPLZ01000005.1 Protein Homology CDS 134686 134949 . + 0 ID=cds-WP_000850547.1;Parent=gene-CCO53_RS10835;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=CCO53_RS10835;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 135050 135691 . + . ID=gene-CCO53_RS10840;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=CCO53_RS10840;old_locus_tag=CCO53_10825 NZ_NPLZ01000005.1 Protein Homology CDS 135050 135691 . + 0 ID=cds-WP_058661357.1;Parent=gene-CCO53_RS10840;Dbxref=GenBank:WP_058661357.1;Name=WP_058661357.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=CCO53_RS10840;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_058661357.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 135993 136946 . + . ID=gene-CCO53_RS10845;Name=CCO53_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10845;old_locus_tag=CCO53_10830 NZ_NPLZ01000005.1 Protein Homology CDS 135993 136946 . + 0 ID=cds-WP_094887667.1;Parent=gene-CCO53_RS10845;Dbxref=GenBank:WP_094887667.1;Name=WP_094887667.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=CCO53_RS10845;product=YbeF family transcriptional regulator;protein_id=WP_094887667.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 137152 138117 . + . ID=gene-CCO53_RS10850;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CCO53_RS10850;old_locus_tag=CCO53_10835 NZ_NPLZ01000005.1 Protein Homology CDS 137152 138117 . + 0 ID=cds-WP_000042640.1;Parent=gene-CCO53_RS10850;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=CCO53_RS10850;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 138203 138406 . - . ID=gene-CCO53_RS10855;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=CCO53_RS10855;old_locus_tag=CCO53_10840 NZ_NPLZ01000005.1 Protein Homology CDS 138203 138406 . - 0 ID=cds-WP_000503938.1;Parent=gene-CCO53_RS10855;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=CCO53_RS10855;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 138535 139323 . - . ID=gene-CCO53_RS10860;Name=CCO53_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10860;old_locus_tag=CCO53_10845 NZ_NPLZ01000005.1 Protein Homology CDS 138535 139323 . - 0 ID=cds-WP_000495788.1;Parent=gene-CCO53_RS10860;Dbxref=GenBank:WP_000495788.1;Name=WP_000495788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=CCO53_RS10860;product=deaminated glutathione amidase;protein_id=WP_000495788.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 139414 139797 . + . ID=gene-CCO53_RS10865;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CCO53_RS10865;old_locus_tag=CCO53_10850 NZ_NPLZ01000005.1 Protein Homology CDS 139414 139797 . + 0 ID=cds-WP_000939753.1;Parent=gene-CCO53_RS10865;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=CCO53_RS10865;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 139855 140064 . - . ID=gene-CCO53_RS10870;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO53_RS10870;old_locus_tag=CCO53_10855 NZ_NPLZ01000005.1 Protein Homology CDS 139855 140064 . - 0 ID=cds-WP_000034826.1;Parent=gene-CCO53_RS10870;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=CCO53_RS10870;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 140252 140824 . - . ID=gene-CCO53_RS10875;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=CCO53_RS10875;old_locus_tag=CCO53_10860 NZ_NPLZ01000005.1 Protein Homology CDS 140252 140824 . - 0 ID=cds-WP_072275507.1;Parent=gene-CCO53_RS10875;Dbxref=GenBank:WP_072275507.1;Name=WP_072275507.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=CCO53_RS10875;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_072275507.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 141203 142591 . + . ID=gene-CCO53_RS10885;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=CCO53_RS10885;old_locus_tag=CCO53_10870 NZ_NPLZ01000005.1 Protein Homology CDS 141203 142591 . + 0 ID=cds-WP_023201923.1;Parent=gene-CCO53_RS10885;Dbxref=GenBank:WP_023201923.1;Name=WP_023201923.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=CCO53_RS10885;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_023201923.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 142642 143322 . - . ID=gene-CCO53_RS10890;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=CCO53_RS10890;old_locus_tag=CCO53_10875 NZ_NPLZ01000005.1 Protein Homology CDS 142642 143322 . - 0 ID=cds-WP_000138786.1;Parent=gene-CCO53_RS10890;Dbxref=GenBank:WP_000138786.1;Name=WP_000138786.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=CCO53_RS10890;product=two-component response regulator DpiA;protein_id=WP_000138786.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 143291 144952 . - . ID=gene-CCO53_RS10895;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=CCO53_RS10895;old_locus_tag=CCO53_10880 NZ_NPLZ01000005.1 Protein Homology CDS 143291 144952 . - 0 ID=cds-WP_053299977.1;Parent=gene-CCO53_RS10895;Dbxref=GenBank:WP_053299977.1;Name=WP_053299977.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=CCO53_RS10895;product=sensor histidine kinase DpiB;protein_id=WP_053299977.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 145337 146413 . + . ID=gene-CCO53_RS10905;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO53_RS10905;old_locus_tag=CCO53_10890 NZ_NPLZ01000005.1 Protein Homology CDS 145337 146413 . + 0 ID=cds-WP_058331942.1;Parent=gene-CCO53_RS10905;Dbxref=GenBank:WP_058331942.1;Name=WP_058331942.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=CCO53_RS10905;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_058331942.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 146410 146706 . + . ID=gene-CCO53_RS10910;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO53_RS10910;old_locus_tag=CCO53_10895 NZ_NPLZ01000005.1 Protein Homology CDS 146410 146706 . + 0 ID=cds-WP_000700679.1;Parent=gene-CCO53_RS10910;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=CCO53_RS10910;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 146703 147611 . + . ID=gene-CCO53_RS10915;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO53_RS10915;old_locus_tag=CCO53_10900 NZ_NPLZ01000005.1 Protein Homology CDS 146703 147611 . + 0 ID=cds-WP_000622349.1;Parent=gene-CCO53_RS10915;Dbxref=GenBank:WP_000622349.1;Name=WP_000622349.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=CCO53_RS10915;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622349.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 147621 149150 . + . ID=gene-CCO53_RS10920;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO53_RS10920;old_locus_tag=CCO53_10905 NZ_NPLZ01000005.1 Protein Homology CDS 147621 149150 . + 0 ID=cds-WP_000192323.1;Parent=gene-CCO53_RS10920;Dbxref=GenBank:WP_000192323.1;Name=WP_000192323.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=CCO53_RS10920;product=citrate lyase subunit alpha;protein_id=WP_000192323.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 149154 149696 . + . ID=gene-CCO53_RS10925;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO53_RS10925;old_locus_tag=CCO53_10910 NZ_NPLZ01000005.1 Protein Homology CDS 149154 149696 . + 0 ID=cds-WP_001238274.1;Parent=gene-CCO53_RS10925;Dbxref=GenBank:WP_001238274.1;Name=WP_001238274.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238274.1;locus_tag=CCO53_RS10925;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_001238274.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 149677 150573 . + . ID=gene-CCO53_RS10930;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO53_RS10930;old_locus_tag=CCO53_10915 NZ_NPLZ01000005.1 Protein Homology CDS 149677 150573 . + 0 ID=cds-WP_023201925.1;Parent=gene-CCO53_RS10930;Dbxref=GenBank:WP_023201925.1;Name=WP_023201925.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=CCO53_RS10930;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_023201925.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 150611 152074 . + . ID=gene-CCO53_RS10935;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=CCO53_RS10935;old_locus_tag=CCO53_10920 NZ_NPLZ01000005.1 Protein Homology CDS 150611 152074 . + 0 ID=cds-WP_000059040.1;Parent=gene-CCO53_RS10935;Dbxref=GenBank:WP_000059040.1;Name=WP_000059040.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=CCO53_RS10935;product=citrate/succinate antiporter CitT;protein_id=WP_000059040.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 152184 152990 . + . ID=gene-CCO53_RS10940;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=CCO53_RS10940;old_locus_tag=CCO53_10925 NZ_NPLZ01000005.1 Protein Homology CDS 152184 152990 . + 0 ID=cds-WP_094887668.1;Parent=gene-CCO53_RS10940;Dbxref=GenBank:WP_094887668.1;Name=WP_094887668.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=CCO53_RS10940;product=ribonuclease I;protein_id=WP_094887668.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 153225 153635 . + . ID=gene-CCO53_RS10950;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=CCO53_RS10950;old_locus_tag=CCO53_10935 NZ_NPLZ01000005.1 Protein Homology CDS 153225 153635 . + 0 ID=cds-WP_000089748.1;Parent=gene-CCO53_RS10950;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=CCO53_RS10950;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 153718 154956 . - . ID=gene-CCO53_RS10955;Name=CCO53_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10955;old_locus_tag=CCO53_10940 NZ_NPLZ01000005.1 Protein Homology CDS 153718 154956 . - 0 ID=cds-WP_000646118.1;Parent=gene-CCO53_RS10955;Dbxref=GenBank:WP_000646118.1;Name=WP_000646118.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=CCO53_RS10955;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646118.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 155179 155607 . + . ID=gene-CCO53_RS10960;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=CCO53_RS10960;old_locus_tag=CCO53_10945 NZ_NPLZ01000005.1 Protein Homology CDS 155179 155607 . + 0 ID=cds-WP_000278499.1;Parent=gene-CCO53_RS10960;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=CCO53_RS10960;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 155675 156442 . - . ID=gene-CCO53_RS10965;Name=CCO53_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10965;old_locus_tag=CCO53_10950 NZ_NPLZ01000005.1 Protein Homology CDS 155675 156442 . - 0 ID=cds-WP_000417096.1;Parent=gene-CCO53_RS10965;Dbxref=GenBank:WP_000417096.1;Name=WP_000417096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=CCO53_RS10965;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417096.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 156442 156999 . - . ID=gene-CCO53_RS10970;Name=CCO53_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10970;old_locus_tag=CCO53_10955 NZ_NPLZ01000005.1 Protein Homology CDS 156442 156999 . - 0 ID=cds-WP_001250381.1;Parent=gene-CCO53_RS10970;Dbxref=GenBank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=CCO53_RS10970;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 156996 159275 . - . ID=gene-CCO53_RS10975;Name=CCO53_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10975;old_locus_tag=CCO53_10960 NZ_NPLZ01000005.1 Protein Homology CDS 156996 159275 . - 0 ID=cds-WP_094887669.1;Parent=gene-CCO53_RS10975;Dbxref=GenBank:WP_094887669.1;Name=WP_094887669.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=CCO53_RS10975;product=molybdopterin-dependent oxidoreductase;protein_id=WP_094887669.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 159268 159828 . - . ID=gene-CCO53_RS10980;Name=CCO53_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS10980;old_locus_tag=CCO53_10965 NZ_NPLZ01000005.1 Protein Homology CDS 159268 159828 . - 0 ID=cds-WP_080210045.1;Parent=gene-CCO53_RS10980;Dbxref=GenBank:WP_080210045.1;Name=WP_080210045.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=CCO53_RS10980;product=TorD/DmsD family molecular chaperone;protein_id=WP_080210045.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 160161 161726 . - . ID=gene-CCO53_RS10985;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CCO53_RS10985;old_locus_tag=CCO53_10970 NZ_NPLZ01000005.1 Protein Homology CDS 160161 161726 . - 0 ID=cds-WP_000887644.1;Parent=gene-CCO53_RS10985;Dbxref=GenBank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=CCO53_RS10985;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 161968 162531 . - . ID=gene-CCO53_RS10990;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CCO53_RS10990;old_locus_tag=CCO53_10975 NZ_NPLZ01000005.1 Protein Homology CDS 161968 162531 . - 0 ID=cds-WP_000052802.1;Parent=gene-CCO53_RS10990;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=CCO53_RS10990;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 162972 163718 . + . ID=gene-CCO53_RS10995;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=CCO53_RS10995;old_locus_tag=CCO53_10980 NZ_NPLZ01000005.1 Protein Homology CDS 162972 163718 . + 0 ID=cds-WP_058109367.1;Parent=gene-CCO53_RS10995;Dbxref=GenBank:WP_058109367.1;Name=WP_058109367.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=CCO53_RS10995;product=thiol:disulfide interchange protein DsbG;protein_id=WP_058109367.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 164035 164937 . + . ID=gene-CCO53_RS11005;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;locus_tag=CCO53_RS11005;old_locus_tag=CCO53_10990 NZ_NPLZ01000005.1 Protein Homology CDS 164035 164937 . + 0 ID=cds-WP_000002503.1;Parent=gene-CCO53_RS11005;Dbxref=GenBank:WP_000002503.1;Name=WP_000002503.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=CCO53_RS11005;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002503.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 165103 166338 . + . ID=gene-CCO53_RS11010;Name=CCO53_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11010;old_locus_tag=CCO53_10995 NZ_NPLZ01000005.1 Protein Homology CDS 165103 166338 . + 0 ID=cds-WP_000118142.1;Parent=gene-CCO53_RS11010;Dbxref=GenBank:WP_000118142.1;Name=WP_000118142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=CCO53_RS11010;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118142.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 166311 166928 . + . ID=gene-CCO53_RS11015;Name=CCO53_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11015;old_locus_tag=CCO53_11000 NZ_NPLZ01000005.1 Protein Homology CDS 166311 166928 . + 0 ID=cds-WP_001164755.1;Parent=gene-CCO53_RS11015;Dbxref=GenBank:WP_001164755.1;Name=WP_001164755.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=CCO53_RS11015;product=IbrB-like domain-containing protein;protein_id=WP_001164755.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 166929 168089 . - . ID=gene-CCO53_RS11020;Name=CCO53_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11020;old_locus_tag=CCO53_11005 NZ_NPLZ01000005.1 Protein Homology CDS 166929 168089 . - 0 ID=cds-WP_001533997.1;Parent=gene-CCO53_RS11020;Dbxref=GenBank:WP_001533997.1;Name=WP_001533997.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=CCO53_RS11020;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_001533997.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 168216 169304 . + . ID=gene-CCO53_RS11025;Name=CCO53_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11025;old_locus_tag=CCO53_11010 NZ_NPLZ01000005.1 Protein Homology CDS 168216 169304 . + 0 ID=cds-WP_058331945.1;Parent=gene-CCO53_RS11025;Dbxref=GenBank:WP_058331945.1;Name=WP_058331945.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=CCO53_RS11025;product=oxidoreductase;protein_id=WP_058331945.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 169340 169537 . - . ID=gene-CCO53_RS11030;Name=CCO53_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11030;old_locus_tag=CCO53_11015 NZ_NPLZ01000005.1 Protein Homology CDS 169340 169537 . - 0 ID=cds-WP_000460619.1;Parent=gene-CCO53_RS11030;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=CCO53_RS11030;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 169601 171706 . - . ID=gene-CCO53_RS11035;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=CCO53_RS11035;old_locus_tag=CCO53_11020 NZ_NPLZ01000005.1 Protein Homology CDS 169601 171706 . - 0 ID=cds-WP_001043108.1;Parent=gene-CCO53_RS11035;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=CCO53_RS11035;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 171888 172301 . - . ID=gene-CCO53_RS11040;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=CCO53_RS11040;old_locus_tag=CCO53_11025 NZ_NPLZ01000005.1 Protein Homology CDS 171888 172301 . - 0 ID=cds-WP_000637966.1;Parent=gene-CCO53_RS11040;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=CCO53_RS11040;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 172304 173059 . - . ID=gene-CCO53_RS11045;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=CCO53_RS11045;old_locus_tag=CCO53_11030 NZ_NPLZ01000005.1 Protein Homology CDS 172304 173059 . - 0 ID=cds-WP_000145518.1;Parent=gene-CCO53_RS11045;Dbxref=GenBank:WP_000145518.1;Name=WP_000145518.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=CCO53_RS11045;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_000145518.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 173059 173916 . - . ID=gene-CCO53_RS11050;Name=CCO53_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11050;old_locus_tag=CCO53_11035 NZ_NPLZ01000005.1 Protein Homology CDS 173059 173916 . - 0 ID=cds-WP_001007166.1;Parent=gene-CCO53_RS11050;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=CCO53_RS11050;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 173930 175540 . - . ID=gene-CCO53_RS11055;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=CCO53_RS11055;old_locus_tag=CCO53_11040 NZ_NPLZ01000005.1 Protein Homology CDS 173930 175540 . - 0 ID=cds-WP_061372196.1;Parent=gene-CCO53_RS11055;Dbxref=GenBank:WP_061372196.1;Name=WP_061372196.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=CCO53_RS11055;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_061372196.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 175550 176725 . - . ID=gene-CCO53_RS11060;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=CCO53_RS11060;old_locus_tag=CCO53_11045 NZ_NPLZ01000005.1 Protein Homology CDS 175550 176725 . - 0 ID=cds-WP_000367596.1;Parent=gene-CCO53_RS11060;Dbxref=GenBank:WP_000367596.1;Name=WP_000367596.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=CCO53_RS11060;product=isochorismate synthase EntC;protein_id=WP_000367596.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 177033 177989 . + . ID=gene-CCO53_RS11065;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=CCO53_RS11065;old_locus_tag=CCO53_11050 NZ_NPLZ01000005.1 Protein Homology CDS 177033 177989 . + 0 ID=cds-WP_001238985.1;Parent=gene-CCO53_RS11065;Dbxref=GenBank:WP_001238985.1;Name=WP_001238985.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=CCO53_RS11065;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001238985.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 178052 179296 . - . ID=gene-CCO53_RS11070;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=CCO53_RS11070;old_locus_tag=CCO53_11055 NZ_NPLZ01000005.1 Protein Homology CDS 178052 179296 . - 0 ID=cds-WP_001081661.1;Parent=gene-CCO53_RS11070;Dbxref=GenBank:WP_001081661.1;Name=WP_001081661.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=CCO53_RS11070;product=enterobactin transporter EntS;protein_id=WP_001081661.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 179407 180414 . + . ID=gene-CCO53_RS11075;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=CCO53_RS11075;old_locus_tag=CCO53_11060 NZ_NPLZ01000005.1 Protein Homology CDS 179407 180414 . + 0 ID=cds-WP_001277870.1;Parent=gene-CCO53_RS11075;Dbxref=GenBank:WP_001277870.1;Name=WP_001277870.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=CCO53_RS11075;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277870.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 180414 181403 . + . ID=gene-CCO53_RS11080;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=CCO53_RS11080;old_locus_tag=CCO53_11065 NZ_NPLZ01000005.1 Protein Homology CDS 180414 181403 . + 0 ID=cds-WP_000480053.1;Parent=gene-CCO53_RS11080;Dbxref=GenBank:WP_000480053.1;Name=WP_000480053.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=CCO53_RS11080;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480053.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 181400 182194 . + . ID=gene-CCO53_RS11085;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=CCO53_RS11085;old_locus_tag=CCO53_11070 NZ_NPLZ01000005.1 Protein Homology CDS 181400 182194 . + 0 ID=cds-WP_000140622.1;Parent=gene-CCO53_RS11085;Dbxref=GenBank:WP_000140622.1;Name=WP_000140622.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=CCO53_RS11085;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140622.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 182248 183384 . - . ID=gene-CCO53_RS11090;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=CCO53_RS11090;old_locus_tag=CCO53_11075 NZ_NPLZ01000005.1 Protein Homology CDS 182248 183384 . - 0 ID=cds-WP_042948062.1;Parent=gene-CCO53_RS11090;Dbxref=GenBank:WP_042948062.1;Name=WP_042948062.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=CCO53_RS11090;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_042948062.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 183634 187518 . - . ID=gene-CCO53_RS11095;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=CCO53_RS11095;old_locus_tag=CCO53_11080 NZ_NPLZ01000005.1 Protein Homology CDS 183634 187518 . - 0 ID=cds-WP_061372194.1;Parent=gene-CCO53_RS11095;Dbxref=GenBank:WP_061372194.1;Name=WP_061372194.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=CCO53_RS11095;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_061372194.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 187515 187733 . - . ID=gene-CCO53_RS11100;Name=CCO53_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11100;old_locus_tag=CCO53_11085 NZ_NPLZ01000005.1 Protein Homology CDS 187515 187733 . - 0 ID=cds-WP_001623050.1;Parent=gene-CCO53_RS11100;Dbxref=GenBank:WP_001623050.1;Name=WP_001623050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=CCO53_RS11100;product=MbtH family protein;protein_id=WP_001623050.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 187764 188978 . - . ID=gene-CCO53_RS11105;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=CCO53_RS11105;old_locus_tag=CCO53_11090 NZ_NPLZ01000005.1 Protein Homology CDS 187764 188978 . - 0 ID=cds-WP_080207830.1;Parent=gene-CCO53_RS11105;Dbxref=GenBank:WP_080207830.1;Name=WP_080207830.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=CCO53_RS11105;product=enterochelin esterase;protein_id=WP_080207830.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 189167 191422 . + . ID=gene-CCO53_RS11110;Name=CCO53_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11110;old_locus_tag=CCO53_11095 NZ_NPLZ01000005.1 Protein Homology CDS 189167 191422 . + 0 ID=cds-WP_001034966.1;Parent=gene-CCO53_RS11110;Dbxref=GenBank:WP_001034966.1;Name=WP_001034966.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=CCO53_RS11110;product=TonB-dependent siderophore receptor;protein_id=WP_001034966.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 191468 192172 . + . ID=gene-CCO53_RS11115;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=CCO53_RS11115;old_locus_tag=CCO53_11100 NZ_NPLZ01000005.1 Protein Homology CDS 191468 192172 . + 0 ID=cds-WP_094887670.1;Parent=gene-CCO53_RS11115;Dbxref=GenBank:WP_094887670.1;Name=WP_094887670.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=CCO53_RS11115;product=enterobactin synthase subunit EntD;protein_id=WP_094887670.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 192184 193302 . + . ID=gene-CCO53_RS11120;Name=CCO53_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11120;old_locus_tag=CCO53_11105 NZ_NPLZ01000005.1 Protein Homology CDS 192184 193302 . + 0 ID=cds-WP_094887671.1;Parent=gene-CCO53_RS11120;Dbxref=GenBank:WP_094887671.1;Name=WP_094887671.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=CCO53_RS11120;product=YbdK family carboxylate-amine ligase;protein_id=WP_094887671.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 193369 193617 . + . ID=gene-CCO53_RS11125;Name=CCO53_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11125;old_locus_tag=CCO53_11110 NZ_NPLZ01000005.1 Protein Homology CDS 193369 193617 . + 0 ID=cds-WP_000682497.1;Parent=gene-CCO53_RS11125;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=CCO53_RS11125;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 193623 193964 . - . ID=gene-CCO53_RS11130;Name=CCO53_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11130;old_locus_tag=CCO53_11115 NZ_NPLZ01000005.1 Protein Homology CDS 193623 193964 . - 0 ID=cds-WP_080160071.1;Parent=gene-CCO53_RS11130;Dbxref=GenBank:WP_080160071.1;Name=WP_080160071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=CCO53_RS11130;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_080160071.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 194253 194834 . + . ID=gene-CCO53_RS11135;Name=CCO53_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11135;old_locus_tag=CCO53_11120 NZ_NPLZ01000005.1 Protein Homology CDS 194253 194834 . + 0 ID=cds-WP_000113609.1;Parent=gene-CCO53_RS11135;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=CCO53_RS11135;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 194834 195202 . + . ID=gene-CCO53_RS11140;Name=CCO53_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11140;old_locus_tag=CCO53_11125 NZ_NPLZ01000005.1 Protein Homology CDS 194834 195202 . + 0 ID=cds-WP_000348989.1;Parent=gene-CCO53_RS11140;Dbxref=GenBank:WP_000348989.1;Name=WP_000348989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=CCO53_RS11140;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348989.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 195299 195952 . + . ID=gene-CCO53_RS11145;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=CCO53_RS11145;old_locus_tag=CCO53_11130 NZ_NPLZ01000005.1 Protein Homology CDS 195299 195952 . + 0 ID=cds-WP_001529050.1;Parent=gene-CCO53_RS11145;Dbxref=GenBank:WP_001529050.1;Name=WP_001529050.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=CCO53_RS11145;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_001529050.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 196219 198189 . - . ID=gene-CCO53_RS11150;Name=CCO53_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11150;old_locus_tag=CCO53_11135 NZ_NPLZ01000005.1 Protein Homology CDS 196219 198189 . - 0 ID=cds-WP_058331300.1;Parent=gene-CCO53_RS11150;Dbxref=GenBank:WP_058331300.1;Name=WP_058331300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=CCO53_RS11150;product=autotransporter domain-containing esterase;protein_id=WP_058331300.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 198500 199747 . + . ID=gene-CCO53_RS11160;Name=CCO53_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11160;old_locus_tag=CCO53_11145 NZ_NPLZ01000005.1 Protein Homology CDS 198500 199747 . + 0 ID=cds-WP_001156978.1;Parent=gene-CCO53_RS11160;Dbxref=GenBank:WP_001156978.1;Name=WP_001156978.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=CCO53_RS11160;product=mechanosensitive ion channel family protein;protein_id=WP_001156978.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 199789 201183 . - . ID=gene-CCO53_RS11165;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=CCO53_RS11165;old_locus_tag=CCO53_11150 NZ_NPLZ01000005.1 Protein Homology CDS 199789 201183 . - 0 ID=cds-WP_058331299.1;Parent=gene-CCO53_RS11165;Dbxref=GenBank:WP_058331299.1;Name=WP_058331299.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=CCO53_RS11165;product=phenylalanine transporter;protein_id=WP_058331299.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 201509 202684 . + . ID=gene-CCO53_RS11170;Name=CCO53_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11170;old_locus_tag=CCO53_11155 NZ_NPLZ01000005.1 Protein Homology CDS 201509 202684 . + 0 ID=cds-WP_094887672.1;Parent=gene-CCO53_RS11170;Dbxref=GenBank:WP_094887672.1;Name=WP_094887672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=CCO53_RS11170;product=DnaJ family molecular chaperone;protein_id=WP_094887672.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 202771 203331 . - . ID=gene-CCO53_RS11175;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=CCO53_RS11175;old_locus_tag=CCO53_11160 NZ_NPLZ01000005.1 Protein Homology CDS 202771 203331 . - 0 ID=cds-WP_000362177.1;Parent=gene-CCO53_RS11175;Dbxref=GenBank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=CCO53_RS11175;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 203344 203580 . - . ID=gene-CCO53_RS11180;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=CCO53_RS11180;old_locus_tag=CCO53_11165 NZ_NPLZ01000005.1 Protein Homology CDS 203344 203580 . - 0 ID=cds-WP_000922170.1;Parent=gene-CCO53_RS11180;Dbxref=GenBank:WP_000922170.1;Name=WP_000922170.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=CCO53_RS11180;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922170.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 203737 205062 . - . ID=gene-CCO53_RS11185;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=CCO53_RS11185;old_locus_tag=CCO53_11170 NZ_NPLZ01000005.1 Protein Homology CDS 203737 205062 . - 0 ID=cds-WP_000195929.1;Parent=gene-CCO53_RS11185;Dbxref=GenBank:WP_000195929.1;Name=WP_000195929.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=CCO53_RS11185;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_000195929.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 205278 206132 . + . ID=gene-CCO53_RS11190;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=CCO53_RS11190;old_locus_tag=CCO53_11175 NZ_NPLZ01000005.1 Protein Homology CDS 205278 206132 . + 0 ID=cds-WP_094887673.1;Parent=gene-CCO53_RS11190;Dbxref=GenBank:WP_094887673.1;Name=WP_094887673.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=CCO53_RS11190;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_094887673.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq pseudogene 206183 206287 . - . ID=gene-CCO53_RS11195;Name=CCO53_RS11195;end_range=206287,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS11195;old_locus_tag=CCO53_11180;partial=true;pseudo=true NZ_NPLZ01000005.1 Protein Homology CDS 206183 206287 . - 0 ID=cds-CCO53_RS11195;Parent=gene-CCO53_RS11195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=206287,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=CCO53_RS11195;partial=true;product=cation transporter;pseudo=true;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 206604 206680 . - . ID=gene-CCO53_RS11200;Name=CCO53_RS11200;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS11200;old_locus_tag=CCO53_11185 NZ_NPLZ01000005.1 tRNAscan-SE tRNA 206604 206680 . - . ID=rna-CCO53_RS11200;Parent=gene-CCO53_RS11200;anticodon=(pos:complement(206644..206646));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS11200;product=tRNA-Arg NZ_NPLZ01000005.1 tRNAscan-SE exon 206604 206680 . - . ID=exon-CCO53_RS11200-1;Parent=rna-CCO53_RS11200;anticodon=(pos:complement(206644..206646));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS11200;product=tRNA-Arg NZ_NPLZ01000005.1 RefSeq gene 206935 207531 . + . ID=gene-CCO53_RS11210;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=CCO53_RS11210;old_locus_tag=CCO53_11195 NZ_NPLZ01000005.1 Protein Homology CDS 206935 207531 . + 0 ID=cds-WP_058331298.1;Parent=gene-CCO53_RS11210;Dbxref=GenBank:WP_058331298.1;Name=WP_058331298.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=CCO53_RS11210;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_058331298.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 207693 208004 . + . ID=gene-CCO53_RS11215;Name=CCO53_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11215;old_locus_tag=CCO53_11200 NZ_NPLZ01000005.1 Protein Homology CDS 207693 208004 . + 0 ID=cds-WP_079841500.1;Parent=gene-CCO53_RS11215;Dbxref=GenBank:WP_079841500.1;Name=WP_079841500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=CCO53_RS11215;product=diguanylate cyclase;protein_id=WP_079841500.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 208023 208745 . + . ID=gene-CCO53_RS11220;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=CCO53_RS11220;old_locus_tag=CCO53_11205 NZ_NPLZ01000005.1 Protein Homology CDS 208023 208745 . + 0 ID=cds-WP_094887674.1;Parent=gene-CCO53_RS11220;Dbxref=GenBank:WP_094887674.1;Name=WP_094887674.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=CCO53_RS11220;product=fimbria biosynthesis regulator FimY;protein_id=WP_094887674.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 209349 209981 . + . ID=gene-CCO53_RS11225;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=CCO53_RS11225;old_locus_tag=CCO53_11210 NZ_NPLZ01000005.1 Protein Homology CDS 209349 209981 . + 0 ID=cds-WP_000801273.1;Parent=gene-CCO53_RS11225;Dbxref=GenBank:WP_000801273.1;Name=WP_000801273.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=CCO53_RS11225;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801273.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 210027 210545 . - . ID=gene-CCO53_RS11230;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=CCO53_RS11230;old_locus_tag=CCO53_11215 NZ_NPLZ01000005.1 Protein Homology CDS 210027 210545 . - 0 ID=cds-WP_094887675.1;Parent=gene-CCO53_RS11230;Dbxref=GenBank:WP_094887675.1;Name=WP_094887675.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=CCO53_RS11230;product=fimbria assembly protein;protein_id=WP_094887675.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 210555 211562 . - . ID=gene-CCO53_RS11235;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=CCO53_RS11235;old_locus_tag=CCO53_11220 NZ_NPLZ01000005.1 Protein Homology CDS 210555 211562 . - 0 ID=cds-WP_080207826.1;Parent=gene-CCO53_RS11235;Dbxref=GenBank:WP_080207826.1;Name=WP_080207826.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=CCO53_RS11235;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_080207826.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 211577 214189 . - . ID=gene-CCO53_RS11240;Name=CCO53_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11240;old_locus_tag=CCO53_11225 NZ_NPLZ01000005.1 Protein Homology CDS 211577 214189 . - 0 ID=cds-WP_094887676.1;Parent=gene-CCO53_RS11240;Dbxref=GenBank:WP_094887676.1;Name=WP_094887676.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=CCO53_RS11240;product=fimbrial biogenesis usher protein;protein_id=WP_094887676.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 214220 214912 . - . ID=gene-CCO53_RS11245;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=CCO53_RS11245;old_locus_tag=CCO53_11230 NZ_NPLZ01000005.1 Protein Homology CDS 214220 214912 . - 0 ID=cds-WP_001519112.1;Parent=gene-CCO53_RS11245;Dbxref=GenBank:WP_001519112.1;Name=WP_001519112.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=CCO53_RS11245;product=type 1 fimbria chaperone FimC;protein_id=WP_001519112.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 214956 215489 . - . ID=gene-CCO53_RS11250;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=CCO53_RS11250;old_locus_tag=CCO53_11235 NZ_NPLZ01000005.1 Protein Homology CDS 214956 215489 . - 0 ID=cds-WP_000619604.1;Parent=gene-CCO53_RS11250;Dbxref=GenBank:WP_000619604.1;Name=WP_000619604.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=CCO53_RS11250;product=type 1 fimbrial protein subunit FimI;protein_id=WP_000619604.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 215564 216121 . - . ID=gene-CCO53_RS11255;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=CCO53_RS11255;old_locus_tag=CCO53_11240 NZ_NPLZ01000005.1 Protein Homology CDS 215564 216121 . - 0 ID=cds-WP_061372186.1;Parent=gene-CCO53_RS11255;Dbxref=GenBank:WP_061372186.1;Name=WP_061372186.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=CCO53_RS11255;product=type 1 fimbrial protein subunit FimA;protein_id=WP_061372186.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 216668 217534 . + . ID=gene-CCO53_RS11265;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CCO53_RS11265;old_locus_tag=CCO53_11250 NZ_NPLZ01000005.1 Protein Homology CDS 216668 217534 . + 0 ID=cds-WP_000729165.1;Parent=gene-CCO53_RS11265;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=CCO53_RS11265;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 217536 217748 . + . ID=gene-CCO53_RS11270;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=CCO53_RS11270;old_locus_tag=CCO53_11255 NZ_NPLZ01000005.1 Protein Homology CDS 217536 217748 . + 0 ID=cds-WP_000190278.1;Parent=gene-CCO53_RS11270;Dbxref=GenBank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=CCO53_RS11270;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 217875 218423 . + . ID=gene-CCO53_RS11275;Name=CCO53_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11275;old_locus_tag=CCO53_11260 NZ_NPLZ01000005.1 Protein Homology CDS 217875 218423 . + 0 ID=cds-WP_023254190.1;Parent=gene-CCO53_RS11275;Dbxref=GenBank:WP_023254190.1;Name=WP_023254190.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728132.1;locus_tag=CCO53_RS11275;product=metal-dependent hydrolase;protein_id=WP_023254190.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 218514 219899 . - . ID=gene-CCO53_RS11280;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CCO53_RS11280;old_locus_tag=CCO53_11265 NZ_NPLZ01000005.1 Protein Homology CDS 218514 219899 . - 0 ID=cds-WP_000912376.1;Parent=gene-CCO53_RS11280;Dbxref=GenBank:WP_000912376.1;Name=WP_000912376.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=CCO53_RS11280;product=cysteine--tRNA ligase;protein_id=WP_000912376.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 220072 220566 . + . ID=gene-CCO53_RS11285;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=CCO53_RS11285;old_locus_tag=CCO53_11270 NZ_NPLZ01000005.1 Protein Homology CDS 220072 220566 . + 0 ID=cds-WP_000255991.1;Parent=gene-CCO53_RS11285;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=CCO53_RS11285;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 220569 221291 . + . ID=gene-CCO53_RS11290;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=CCO53_RS11290;old_locus_tag=CCO53_11275 NZ_NPLZ01000005.1 Protein Homology CDS 220569 221291 . + 0 ID=cds-WP_000212287.1;Parent=gene-CCO53_RS11290;Dbxref=GenBank:WP_000212287.1;Name=WP_000212287.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=CCO53_RS11290;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212287.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 221409 221918 . + . ID=gene-CCO53_RS11300;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CCO53_RS11300;old_locus_tag=CCO53_11285 NZ_NPLZ01000005.1 Protein Homology CDS 221409 221918 . + 0 ID=cds-WP_000098736.1;Parent=gene-CCO53_RS11300;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=CCO53_RS11300;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 221915 222982 . + . ID=gene-CCO53_RS11305;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CCO53_RS11305;old_locus_tag=CCO53_11290 NZ_NPLZ01000005.1 Protein Homology CDS 221915 222982 . + 0 ID=cds-WP_000815599.1;Parent=gene-CCO53_RS11305;Dbxref=GenBank:WP_000815599.1;Name=WP_000815599.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=CCO53_RS11305;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815599.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 223023 223916 . - . ID=gene-CCO53_RS11310;Name=CCO53_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11310;old_locus_tag=CCO53_11295 NZ_NPLZ01000005.1 Protein Homology CDS 223023 223916 . - 0 ID=cds-WP_000855345.1;Parent=gene-CCO53_RS11310;Dbxref=GenBank:WP_000855345.1;Name=WP_000855345.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=CCO53_RS11310;product=carbamate kinase;protein_id=WP_000855345.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 223920 224729 . - . ID=gene-CCO53_RS11315;Name=CCO53_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11315;old_locus_tag=CCO53_11300 NZ_NPLZ01000005.1 Protein Homology CDS 223920 224729 . - 0 ID=cds-WP_000821191.1;Parent=gene-CCO53_RS11315;Dbxref=GenBank:WP_000821191.1;Name=WP_000821191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=CCO53_RS11315;product=DUF2877 domain-containing protein;protein_id=WP_000821191.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 224741 226000 . - . ID=gene-CCO53_RS11320;Name=CCO53_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11320;old_locus_tag=CCO53_11305 NZ_NPLZ01000005.1 Protein Homology CDS 224741 226000 . - 0 ID=cds-WP_000495330.1;Parent=gene-CCO53_RS11320;Dbxref=GenBank:WP_000495330.1;Name=WP_000495330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=CCO53_RS11320;product=DUF1116 domain-containing protein;protein_id=WP_000495330.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 226010 227674 . - . ID=gene-CCO53_RS11325;Name=CCO53_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11325;old_locus_tag=CCO53_11310 NZ_NPLZ01000005.1 Protein Homology CDS 226010 227674 . - 0 ID=cds-WP_058331296.1;Parent=gene-CCO53_RS11325;Dbxref=GenBank:WP_058331296.1;Name=WP_058331296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=CCO53_RS11325;product=acyl-CoA synthetase FdrA;protein_id=WP_058331296.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 227990 229039 . + . ID=gene-CCO53_RS11330;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=CCO53_RS11330;old_locus_tag=CCO53_11315 NZ_NPLZ01000005.1 Protein Homology CDS 227990 229039 . + 0 ID=cds-WP_000703930.1;Parent=gene-CCO53_RS11330;Dbxref=GenBank:WP_000703930.1;Name=WP_000703930.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=CCO53_RS11330;product=ureidoglycolate dehydrogenase AllD;protein_id=WP_000703930.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 229061 230296 . + . ID=gene-CCO53_RS11335;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=CCO53_RS11335;old_locus_tag=CCO53_11320 NZ_NPLZ01000005.1 Protein Homology CDS 229061 230296 . + 0 ID=cds-WP_000589769.1;Parent=gene-CCO53_RS11335;Dbxref=GenBank:WP_000589769.1;Name=WP_000589769.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=CCO53_RS11335;product=allantoate deiminase;protein_id=WP_000589769.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 230307 231092 . + . ID=gene-CCO53_RS11340;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=CCO53_RS11340;old_locus_tag=CCO53_11325 NZ_NPLZ01000005.1 Protein Homology CDS 230307 231092 . + 0 ID=cds-WP_000540987.1;Parent=gene-CCO53_RS11340;Dbxref=GenBank:WP_000540987.1;Name=WP_000540987.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=CCO53_RS11340;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540987.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 231172 232320 . - . ID=gene-CCO53_RS11345;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=CCO53_RS11345;old_locus_tag=CCO53_11330 NZ_NPLZ01000005.1 Protein Homology CDS 231172 232320 . - 0 ID=cds-WP_000706329.1;Parent=gene-CCO53_RS11345;Dbxref=GenBank:WP_000706329.1;Name=WP_000706329.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=CCO53_RS11345;product=glycerate 3-kinase;protein_id=WP_000706329.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 232343 233641 . - . ID=gene-CCO53_RS11350;Name=CCO53_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11350;old_locus_tag=CCO53_11335 NZ_NPLZ01000005.1 Protein Homology CDS 232343 233641 . - 0 ID=cds-WP_024156779.1;Parent=gene-CCO53_RS11350;Dbxref=GenBank:WP_024156779.1;Name=WP_024156779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=CCO53_RS11350;product=uracil/xanthine transporter;protein_id=WP_024156779.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 233700 235061 . - . ID=gene-CCO53_RS11355;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=CCO53_RS11355;old_locus_tag=CCO53_11340 NZ_NPLZ01000005.1 Protein Homology CDS 233700 235061 . - 0 ID=cds-WP_094887677.1;Parent=gene-CCO53_RS11355;Dbxref=GenBank:WP_094887677.1;Name=WP_094887677.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=CCO53_RS11355;product=allantoinase AllB;protein_id=WP_094887677.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 235140 236594 . - . ID=gene-CCO53_RS11360;Name=CCO53_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11360;old_locus_tag=CCO53_11345 NZ_NPLZ01000005.1 Protein Homology CDS 235140 236594 . - 0 ID=cds-WP_000401060.1;Parent=gene-CCO53_RS11360;Dbxref=GenBank:WP_000401060.1;Name=WP_000401060.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=CCO53_RS11360;product=allantoin transporter;protein_id=WP_000401060.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 236690 237937 . - . ID=gene-CCO53_RS11365;Name=CCO53_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11365;old_locus_tag=CCO53_11350 NZ_NPLZ01000005.1 Protein Homology CDS 236690 237937 . - 0 ID=cds-WP_000005070.1;Parent=gene-CCO53_RS11365;Dbxref=GenBank:WP_000005070.1;Name=WP_000005070.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=CCO53_RS11365;product=MFS transporter;protein_id=WP_000005070.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 238003 238881 . - . ID=gene-CCO53_RS11370;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=CCO53_RS11370;old_locus_tag=CCO53_11355 NZ_NPLZ01000005.1 Protein Homology CDS 238003 238881 . - 0 ID=cds-WP_000765810.1;Parent=gene-CCO53_RS11370;Dbxref=GenBank:WP_000765810.1;Name=WP_000765810.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=CCO53_RS11370;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765810.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 238982 239758 . - . ID=gene-CCO53_RS11375;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=CCO53_RS11375;old_locus_tag=CCO53_11360 NZ_NPLZ01000005.1 Protein Homology CDS 238982 239758 . - 0 ID=cds-WP_000943591.1;Parent=gene-CCO53_RS11375;Dbxref=GenBank:WP_000943591.1;Name=WP_000943591.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=CCO53_RS11375;product=hydroxypyruvate isomerase Gip;protein_id=WP_000943591.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 239771 241552 . - . ID=gene-CCO53_RS11380;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=CCO53_RS11380;old_locus_tag=CCO53_11365 NZ_NPLZ01000005.1 Protein Homology CDS 239771 241552 . - 0 ID=cds-WP_001096868.1;Parent=gene-CCO53_RS11380;Dbxref=GenBank:WP_001096868.1;Name=WP_001096868.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=CCO53_RS11380;product=glyoxylate carboligase;protein_id=WP_001096868.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 241637 242455 . - . ID=gene-CCO53_RS11385;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=CCO53_RS11385;old_locus_tag=CCO53_11370 NZ_NPLZ01000005.1 Protein Homology CDS 241637 242455 . - 0 ID=cds-WP_024797961.1;Parent=gene-CCO53_RS11385;Dbxref=GenBank:WP_024797961.1;Name=WP_024797961.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=CCO53_RS11385;product=HTH-type transcriptional repressor AllR;protein_id=WP_024797961.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 242534 243016 . - . ID=gene-CCO53_RS11390;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=CCO53_RS11390;old_locus_tag=CCO53_11375 NZ_NPLZ01000005.1 Protein Homology CDS 242534 243016 . - 0 ID=cds-WP_000764659.1;Parent=gene-CCO53_RS11390;Dbxref=GenBank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=CCO53_RS11390;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 243243 244169 . + . ID=gene-CCO53_RS11395;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=CCO53_RS11395;old_locus_tag=CCO53_11380 NZ_NPLZ01000005.1 Protein Homology CDS 243243 244169 . + 0 ID=cds-WP_000460169.1;Parent=gene-CCO53_RS11395;Dbxref=GenBank:WP_000460169.1;Name=WP_000460169.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=CCO53_RS11395;product=HTH-type transcriptional activator AllS;protein_id=WP_000460169.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 244239 245333 . + . ID=gene-CCO53_RS11400;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=CCO53_RS11400;old_locus_tag=CCO53_11385 NZ_NPLZ01000005.1 Protein Homology CDS 244239 245333 . + 0 ID=cds-WP_061372184.1;Parent=gene-CCO53_RS11400;Dbxref=GenBank:WP_061372184.1;Name=WP_061372184.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=CCO53_RS11400;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_061372184.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 245372 246031 . - . ID=gene-CCO53_RS11405;Name=CCO53_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11405;old_locus_tag=CCO53_11390 NZ_NPLZ01000005.1 Protein Homology CDS 245372 246031 . - 0 ID=cds-WP_000342247.1;Parent=gene-CCO53_RS11405;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=CCO53_RS11405;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 246024 247040 . - . ID=gene-CCO53_RS11410;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=CCO53_RS11410;old_locus_tag=CCO53_11395 NZ_NPLZ01000005.1 Protein Homology CDS 246024 247040 . - 0 ID=cds-WP_000569660.1;Parent=gene-CCO53_RS11410;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=CCO53_RS11410;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 247077 247907 . - . ID=gene-CCO53_RS11415;Name=CCO53_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11415;old_locus_tag=CCO53_11400 NZ_NPLZ01000005.1 Protein Homology CDS 247077 247907 . - 0 ID=cds-WP_000524317.1;Parent=gene-CCO53_RS11415;Dbxref=GenBank:WP_000524317.1;Name=WP_000524317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=CCO53_RS11415;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524317.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 248164 249297 . - . ID=gene-CCO53_RS11420;Name=CCO53_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11420;old_locus_tag=CCO53_11405 NZ_NPLZ01000005.1 Protein Homology CDS 248164 249297 . - 0 ID=cds-WP_094887678.1;Parent=gene-CCO53_RS11420;Dbxref=GenBank:WP_094887678.1;Name=WP_094887678.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=CCO53_RS11420;product=porin;protein_id=WP_094887678.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 249483 251897 . - . ID=gene-CCO53_RS11425;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=CCO53_RS11425;old_locus_tag=CCO53_11410 NZ_NPLZ01000005.1 Protein Homology CDS 249483 251897 . - 0 ID=cds-WP_094887679.1;Parent=gene-CCO53_RS11425;Dbxref=GenBank:WP_094887679.1;Name=WP_094887679.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=CCO53_RS11425;product=putative ABC transporter permease subunit YbbP;protein_id=WP_094887679.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 251894 252580 . - . ID=gene-CCO53_RS11430;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=CCO53_RS11430;old_locus_tag=CCO53_11415 NZ_NPLZ01000005.1 Protein Homology CDS 251894 252580 . - 0 ID=cds-WP_001110598.1;Parent=gene-CCO53_RS11430;Dbxref=GenBank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=CCO53_RS11430;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110598.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 252551 253165 . + . ID=gene-CCO53_RS11435;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=CCO53_RS11435;old_locus_tag=CCO53_11420 NZ_NPLZ01000005.1 Protein Homology CDS 252551 253165 . + 0 ID=cds-WP_020898489.1;Parent=gene-CCO53_RS11435;Dbxref=GenBank:WP_020898489.1;Name=WP_020898489.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=CCO53_RS11435;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_020898489.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 253320 254090 . + . ID=gene-CCO53_RS11440;Name=CCO53_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11440;old_locus_tag=CCO53_11425 NZ_NPLZ01000005.1 Protein Homology CDS 253320 254090 . + 0 ID=cds-WP_001172804.1;Parent=gene-CCO53_RS11440;Dbxref=GenBank:WP_001172804.1;Name=WP_001172804.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=CCO53_RS11440;product=SDR family oxidoreductase;protein_id=WP_001172804.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 254150 255004 . + . ID=gene-CCO53_RS11445;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=CCO53_RS11445;old_locus_tag=CCO53_11430 NZ_NPLZ01000005.1 Protein Homology CDS 254150 255004 . + 0 ID=cds-WP_076935510.1;Parent=gene-CCO53_RS11445;Dbxref=GenBank:WP_076935510.1;Name=WP_076935510.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=CCO53_RS11445;product=chaperedoxin;protein_id=WP_076935510.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 255090 255869 . - . ID=gene-CCO53_RS11450;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=CCO53_RS11450;old_locus_tag=CCO53_11435 NZ_NPLZ01000005.1 Protein Homology CDS 255090 255869 . - 0 ID=cds-WP_094887680.1;Parent=gene-CCO53_RS11450;Dbxref=GenBank:WP_094887680.1;Name=WP_094887680.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=CCO53_RS11450;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_094887680.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 255856 256533 . - . ID=gene-CCO53_RS11455;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=CCO53_RS11455;old_locus_tag=CCO53_11440 NZ_NPLZ01000005.1 Protein Homology CDS 255856 256533 . - 0 ID=cds-WP_080197744.1;Parent=gene-CCO53_RS11455;Dbxref=GenBank:WP_080197744.1;Name=WP_080197744.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=CCO53_RS11455;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_080197744.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 256680 257597 . + . ID=gene-CCO53_RS11460;Name=CCO53_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11460;old_locus_tag=CCO53_11445 NZ_NPLZ01000005.1 Protein Homology CDS 256680 257597 . + 0 ID=cds-WP_000906146.1;Parent=gene-CCO53_RS11460;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=CCO53_RS11460;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 257594 258046 . + . ID=gene-CCO53_RS11465;Name=CCO53_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11465;old_locus_tag=CCO53_11450 NZ_NPLZ01000005.1 Protein Homology CDS 257594 258046 . + 0 ID=cds-WP_000561177.1;Parent=gene-CCO53_RS11465;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=CCO53_RS11465;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 258047 258463 . - . ID=gene-CCO53_RS11470;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=CCO53_RS11470;old_locus_tag=CCO53_11455 NZ_NPLZ01000005.1 Protein Homology CDS 258047 258463 . - 0 ID=cds-WP_001026760.1;Parent=gene-CCO53_RS11470;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=CCO53_RS11470;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 258573 261074 . + . ID=gene-CCO53_RS11475;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=CCO53_RS11475;old_locus_tag=CCO53_11460 NZ_NPLZ01000005.1 Protein Homology CDS 258573 261074 . + 0 ID=cds-WP_000083910.1;Parent=gene-CCO53_RS11475;Dbxref=GenBank:WP_000083910.1;Name=WP_000083910.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=CCO53_RS11475;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083910.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 261229 262056 . + . ID=gene-CCO53_RS11480;Name=CCO53_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11480;old_locus_tag=CCO53_11465 NZ_NPLZ01000005.1 Protein Homology CDS 261229 262056 . + 0 ID=cds-WP_000488545.1;Parent=gene-CCO53_RS11480;Dbxref=GenBank:WP_000488545.1;Name=WP_000488545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=CCO53_RS11480;product=lysozyme inhibitor LprI family protein;protein_id=WP_000488545.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 262142 262936 . + . ID=gene-CCO53_RS11485;Name=CCO53_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11485;old_locus_tag=CCO53_11470 NZ_NPLZ01000005.1 Protein Homology CDS 262142 262936 . + 0 ID=cds-WP_000421865.1;Parent=gene-CCO53_RS11485;Dbxref=GenBank:WP_000421865.1;Name=WP_000421865.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=CCO53_RS11485;product=TraB/GumN family protein;protein_id=WP_000421865.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 263138 263617 . + . ID=gene-CCO53_RS11490;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CCO53_RS11490;old_locus_tag=CCO53_11475 NZ_NPLZ01000005.1 Protein Homology CDS 263138 263617 . + 0 ID=cds-WP_000186618.1;Parent=gene-CCO53_RS11490;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=CCO53_RS11490;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 263734 265386 . - . ID=gene-CCO53_RS11495;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=CCO53_RS11495;old_locus_tag=CCO53_11480 NZ_NPLZ01000005.1 Protein Homology CDS 263734 265386 . - 0 ID=cds-WP_000670398.1;Parent=gene-CCO53_RS11495;Dbxref=GenBank:WP_000670398.1;Name=WP_000670398.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=CCO53_RS11495;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670398.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 265559 266779 . + . ID=gene-CCO53_RS11500;Name=CCO53_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11500;old_locus_tag=CCO53_11485 NZ_NPLZ01000005.1 Protein Homology CDS 265559 266779 . + 0 ID=cds-WP_001251593.1;Parent=gene-CCO53_RS11500;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=CCO53_RS11500;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 266994 268670 . + . ID=gene-CCO53_RS11505;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=CCO53_RS11505;old_locus_tag=CCO53_11490 NZ_NPLZ01000005.1 Protein Homology CDS 266994 268670 . + 0 ID=cds-WP_000546202.1;Parent=gene-CCO53_RS11505;Dbxref=GenBank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=CCO53_RS11505;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546202.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 268719 270023 . - . ID=gene-CCO53_RS11510;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=CCO53_RS11510;old_locus_tag=CCO53_11495 NZ_NPLZ01000005.1 Protein Homology CDS 268719 270023 . - 0 ID=cds-WP_000671592.1;Parent=gene-CCO53_RS11510;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=CCO53_RS11510;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 270176 271147 . + . ID=gene-CCO53_RS11515;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=CCO53_RS11515;old_locus_tag=CCO53_11500 NZ_NPLZ01000005.1 Protein Homology CDS 270176 271147 . + 0 ID=cds-WP_000801789.1;Parent=gene-CCO53_RS11515;Dbxref=GenBank:WP_000801789.1;Name=WP_000801789.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=CCO53_RS11515;product=acetyl esterase;protein_id=WP_000801789.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 271144 272106 . - . ID=gene-CCO53_RS11520;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CCO53_RS11520;old_locus_tag=CCO53_11505 NZ_NPLZ01000005.1 Protein Homology CDS 271144 272106 . - 0 ID=cds-WP_001250078.1;Parent=gene-CCO53_RS11520;Dbxref=GenBank:WP_001250078.1;Name=WP_001250078.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=CCO53_RS11520;product=ferrochelatase;protein_id=WP_001250078.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 272335 272979 . - . ID=gene-CCO53_RS11525;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=CCO53_RS11525;old_locus_tag=CCO53_11510 NZ_NPLZ01000005.1 Protein Homology CDS 272335 272979 . - 0 ID=cds-WP_001220237.1;Parent=gene-CCO53_RS11525;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=CCO53_RS11525;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 273395 275269 . - . ID=gene-CCO53_RS11535;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=CCO53_RS11535;old_locus_tag=CCO53_11520 NZ_NPLZ01000005.1 Protein Homology CDS 273395 275269 . - 0 ID=cds-WP_001523272.1;Parent=gene-CCO53_RS11535;Dbxref=GenBank:WP_001523272.1;Name=WP_001523272.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=CCO53_RS11535;product=molecular chaperone HtpG;protein_id=WP_001523272.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 275380 275985 . - . ID=gene-CCO53_RS11540;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CCO53_RS11540;old_locus_tag=CCO53_11525 NZ_NPLZ01000005.1 Protein Homology CDS 275380 275985 . - 0 ID=cds-WP_001195023.1;Parent=gene-CCO53_RS11540;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=CCO53_RS11540;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 275985 276314 . - . ID=gene-CCO53_RS11545;Name=CCO53_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11545;old_locus_tag=CCO53_11530 NZ_NPLZ01000005.1 Protein Homology CDS 275985 276314 . - 0 ID=cds-WP_000467098.1;Parent=gene-CCO53_RS11545;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=CCO53_RS11545;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 276360 278288 . - . ID=gene-CCO53_RS11550;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CCO53_RS11550;old_locus_tag=CCO53_11535 NZ_NPLZ01000005.1 Protein Homology CDS 276360 278288 . - 0 ID=cds-WP_000121967.1;Parent=gene-CCO53_RS11550;Dbxref=GenBank:WP_000121967.1;Name=WP_000121967.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=CCO53_RS11550;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121967.1;transl_table=11 NZ_NPLZ01000005.1 cmsearch sequence_feature 276963 277027 . - . ID=id-CCO53_RS11550;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS11550 NZ_NPLZ01000005.1 RefSeq gene 278402 278953 . - . ID=gene-CCO53_RS11555;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=CCO53_RS11555;old_locus_tag=CCO53_11540 NZ_NPLZ01000005.1 Protein Homology CDS 278402 278953 . - 0 ID=cds-WP_000127350.1;Parent=gene-CCO53_RS11555;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=CCO53_RS11555;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 279106 279483 . - . ID=gene-CCO53_RS11565;Name=CCO53_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11565;old_locus_tag=CCO53_11550 NZ_NPLZ01000005.1 Protein Homology CDS 279106 279483 . - 0 ID=cds-WP_001189858.1;Parent=gene-CCO53_RS11565;Dbxref=GenBank:WP_001189858.1;Name=WP_001189858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=CCO53_RS11565;product=DUF454 family protein;protein_id=WP_001189858.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 279552 280079 . + . ID=gene-CCO53_RS11570;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=CCO53_RS11570;old_locus_tag=CCO53_11555 NZ_NPLZ01000005.1 Protein Homology CDS 279552 280079 . + 0 ID=cds-WP_001519637.1;Parent=gene-CCO53_RS11570;Dbxref=GenBank:WP_001519637.1;Name=WP_001519637.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=CCO53_RS11570;product=primosomal replication protein N'';protein_id=WP_001519637.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 280093 280260 . + . ID=gene-CCO53_RS11575;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=CCO53_RS11575;old_locus_tag=CCO53_11560 NZ_NPLZ01000005.1 Protein Homology CDS 280093 280260 . + 0 ID=cds-WP_000051161.1;Parent=gene-CCO53_RS11575;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=CCO53_RS11575;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 280330 281265 . + . ID=gene-CCO53_RS11580;Name=CCO53_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11580;old_locus_tag=CCO53_11565 NZ_NPLZ01000005.1 Protein Homology CDS 280330 281265 . + 0 ID=cds-WP_000440517.1;Parent=gene-CCO53_RS11580;Dbxref=GenBank:WP_000440517.1;Name=WP_000440517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=CCO53_RS11580;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000440517.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 281307 284669 . - . ID=gene-CCO53_RS11585;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=CCO53_RS11585;old_locus_tag=CCO53_11570 NZ_NPLZ01000005.1 Protein Homology CDS 281307 284669 . - 0 ID=cds-WP_023216294.1;Parent=gene-CCO53_RS11585;Dbxref=GenBank:WP_023216294.1;Name=WP_023216294.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=CCO53_RS11585;product=mechanosensitive channel MscK;protein_id=WP_023216294.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 284788 285441 . - . ID=gene-CCO53_RS11590;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=CCO53_RS11590;old_locus_tag=CCO53_11575 NZ_NPLZ01000005.1 Protein Homology CDS 284788 285441 . - 0 ID=cds-WP_000101753.1;Parent=gene-CCO53_RS11590;Dbxref=GenBank:WP_000101753.1;Name=WP_000101753.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=CCO53_RS11590;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101753.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 285583 286776 . + . ID=gene-CCO53_RS11595;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=CCO53_RS11595;old_locus_tag=CCO53_11580 NZ_NPLZ01000005.1 Protein Homology CDS 285583 286776 . + 0 ID=cds-WP_058331289.1;Parent=gene-CCO53_RS11595;Dbxref=GenBank:WP_058331289.1;Name=WP_058331289.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=CCO53_RS11595;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_058331289.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 286799 289948 . + . ID=gene-CCO53_RS11600;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=CCO53_RS11600;old_locus_tag=CCO53_11585 NZ_NPLZ01000005.1 Protein Homology CDS 286799 289948 . + 0 ID=cds-WP_001132508.1;Parent=gene-CCO53_RS11600;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=CCO53_RS11600;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 290444 290818 . + . ID=gene-CCO53_RS11605;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=CCO53_RS11605;old_locus_tag=CCO53_11590 NZ_NPLZ01000005.1 Protein Homology CDS 290444 290818 . + 0 ID=cds-WP_000344807.1;Parent=gene-CCO53_RS11605;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=CCO53_RS11605;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 290846 291064 . + . ID=gene-CCO53_RS11610;Name=CCO53_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11610;old_locus_tag=CCO53_11595 NZ_NPLZ01000005.1 Protein Homology CDS 290846 291064 . + 0 ID=cds-WP_001280991.1;Parent=gene-CCO53_RS11610;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=CCO53_RS11610;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 291243 291794 . + . ID=gene-CCO53_RS11615;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=CCO53_RS11615;old_locus_tag=CCO53_11600 NZ_NPLZ01000005.1 Protein Homology CDS 291243 291794 . + 0 ID=cds-WP_080160061.1;Parent=gene-CCO53_RS11615;Dbxref=GenBank:WP_080160061.1;Name=WP_080160061.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=CCO53_RS11615;product=maltose O-acetyltransferase;protein_id=WP_080160061.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 291912 292382 . + . ID=gene-CCO53_RS11620;Name=CCO53_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11620;old_locus_tag=CCO53_11605 NZ_NPLZ01000005.1 Protein Homology CDS 291912 292382 . + 0 ID=cds-WP_000136183.1;Parent=gene-CCO53_RS11620;Dbxref=GenBank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=CCO53_RS11620;product=YlaC family protein;protein_id=WP_000136183.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 292439 292579 . - . ID=gene-CCO53_RS11625;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=CCO53_RS11625;old_locus_tag=CCO53_11610 NZ_NPLZ01000005.1 Protein Homology CDS 292439 292579 . - 0 ID=cds-WP_001197749.1;Parent=gene-CCO53_RS11625;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=CCO53_RS11625;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 292581 292844 . - . ID=gene-CCO53_RS11630;Name=CCO53_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11630;old_locus_tag=CCO53_11615 NZ_NPLZ01000005.1 Protein Homology CDS 292581 292844 . - 0 ID=cds-WP_000801416.1;Parent=gene-CCO53_RS11630;Dbxref=GenBank:WP_000801416.1;Name=WP_000801416.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801422.1;locus_tag=CCO53_RS11630;product=type B 50S ribosomal protein L31;protein_id=WP_000801416.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 293069 294619 . + . ID=gene-CCO53_RS11635;Name=CCO53_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11635;old_locus_tag=CCO53_11620 NZ_NPLZ01000005.1 Protein Homology CDS 293069 294619 . + 0 ID=cds-WP_023231708.1;Parent=gene-CCO53_RS11635;Dbxref=GenBank:WP_023231708.1;Name=WP_023231708.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=CCO53_RS11635;product=EAL domain-containing protein;protein_id=WP_023231708.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 294669 294765 . - . ID=gene-CCO53_RS11640;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CCO53_RS11640;old_locus_tag=CCO53_11625 NZ_NPLZ01000005.1 cmsearch SRP_RNA 294669 294765 . - . ID=rna-CCO53_RS11640;Parent=gene-CCO53_RS11640;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS11640;product=signal recognition particle sRNA small type NZ_NPLZ01000005.1 cmsearch exon 294669 294765 . - . ID=exon-CCO53_RS11640-1;Parent=rna-CCO53_RS11640;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS11640;product=signal recognition particle sRNA small type NZ_NPLZ01000005.1 RefSeq gene 294850 295239 . + . ID=gene-CCO53_RS11645;Name=CCO53_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11645;old_locus_tag=CCO53_11630 NZ_NPLZ01000005.1 Protein Homology CDS 294850 295239 . + 0 ID=cds-WP_000961285.1;Parent=gene-CCO53_RS11645;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=CCO53_RS11645;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 295272 295841 . - . ID=gene-CCO53_RS11650;Name=CCO53_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11650;old_locus_tag=CCO53_11635 NZ_NPLZ01000005.1 Protein Homology CDS 295272 295841 . - 0 ID=cds-WP_000779802.1;Parent=gene-CCO53_RS11650;Dbxref=GenBank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=CCO53_RS11650;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 296056 296916 . + . ID=gene-CCO53_RS11655;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=CCO53_RS11655;old_locus_tag=CCO53_11640 NZ_NPLZ01000005.1 Protein Homology CDS 296056 296916 . + 0 ID=cds-WP_058331288.1;Parent=gene-CCO53_RS11655;Dbxref=GenBank:WP_058331288.1;Name=WP_058331288.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=CCO53_RS11655;product=acyl-CoA thioesterase II;protein_id=WP_058331288.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 297016 298302 . - . ID=gene-CCO53_RS11660;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=CCO53_RS11660;old_locus_tag=CCO53_11645 NZ_NPLZ01000005.1 Protein Homology CDS 297016 298302 . - 0 ID=cds-WP_094887681.1;Parent=gene-CCO53_RS11660;Dbxref=GenBank:WP_094887681.1;Name=WP_094887681.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=CCO53_RS11660;product=ammonium transporter AmtB;protein_id=WP_094887681.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 298334 298672 . - . ID=gene-CCO53_RS11665;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=CCO53_RS11665;old_locus_tag=CCO53_11650 NZ_NPLZ01000005.1 Protein Homology CDS 298334 298672 . - 0 ID=cds-WP_000780341.1;Parent=gene-CCO53_RS11665;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=CCO53_RS11665;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 298885 300666 . - . ID=gene-CCO53_RS11670;Name=CCO53_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11670;old_locus_tag=CCO53_11655 NZ_NPLZ01000005.1 Protein Homology CDS 298885 300666 . - 0 ID=cds-WP_001256070.1;Parent=gene-CCO53_RS11670;Dbxref=GenBank:WP_001256070.1;Name=WP_001256070.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=CCO53_RS11670;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256070.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 300659 302431 . - . ID=gene-CCO53_RS11675;Name=CCO53_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11675;old_locus_tag=CCO53_11660 NZ_NPLZ01000005.1 Protein Homology CDS 300659 302431 . - 0 ID=cds-WP_001235559.1;Parent=gene-CCO53_RS11675;Dbxref=GenBank:WP_001235559.1;Name=WP_001235559.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=CCO53_RS11675;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235559.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 302472 302930 . - . ID=gene-CCO53_RS11680;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=CCO53_RS11680;old_locus_tag=CCO53_11665 NZ_NPLZ01000005.1 Protein Homology CDS 302472 302930 . - 0 ID=cds-WP_000884593.1;Parent=gene-CCO53_RS11680;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=CCO53_RS11680;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 303043 304098 . + . ID=gene-CCO53_RS11685;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=CCO53_RS11685;old_locus_tag=CCO53_11670 NZ_NPLZ01000005.1 Protein Homology CDS 303043 304098 . + 0 ID=cds-WP_079944483.1;Parent=gene-CCO53_RS11685;Dbxref=GenBank:WP_079944483.1;Name=WP_079944483.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=CCO53_RS11685;product=cysteine desulfhydrase;protein_id=WP_079944483.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 304148 304966 . - . ID=gene-CCO53_RS11690;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=CCO53_RS11690;old_locus_tag=CCO53_11675 NZ_NPLZ01000005.1 Protein Homology CDS 304148 304966 . - 0 ID=cds-WP_000113040.1;Parent=gene-CCO53_RS11690;Dbxref=GenBank:WP_000113040.1;Name=WP_000113040.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=CCO53_RS11690;product=HMP-PP phosphatase;protein_id=WP_000113040.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 305066 306766 . + . ID=gene-CCO53_RS11695;Name=CCO53_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11695;old_locus_tag=CCO53_11680 NZ_NPLZ01000005.1 Protein Homology CDS 305066 306766 . + 0 ID=cds-WP_061383670.1;Parent=gene-CCO53_RS11695;Dbxref=GenBank:WP_061383670.1;Name=WP_061383670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=CCO53_RS11695;product=SgrR family transcriptional regulator;protein_id=WP_061383670.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 306831 307526 . + . ID=gene-CCO53_RS11700;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CCO53_RS11700;old_locus_tag=CCO53_11685 NZ_NPLZ01000005.1 Protein Homology CDS 306831 307526 . + 0 ID=cds-WP_058331284.1;Parent=gene-CCO53_RS11700;Dbxref=GenBank:WP_058331284.1;Name=WP_058331284.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=CCO53_RS11700;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_058331284.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 307632 308030 . - . ID=gene-CCO53_RS11705;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=CCO53_RS11705;old_locus_tag=CCO53_11690 NZ_NPLZ01000005.1 Protein Homology CDS 307632 308030 . - 0 ID=cds-WP_001194543.1;Parent=gene-CCO53_RS11705;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=CCO53_RS11705;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 308134 308508 . - . ID=gene-CCO53_RS11710;Name=CCO53_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11710;old_locus_tag=CCO53_11695 NZ_NPLZ01000005.1 Protein Homology CDS 308134 308508 . - 0 ID=cds-WP_000680322.1;Parent=gene-CCO53_RS11710;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=CCO53_RS11710;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 308658 310529 . - . ID=gene-CCO53_RS11715;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=CCO53_RS11715;old_locus_tag=CCO53_11700 NZ_NPLZ01000005.1 Protein Homology CDS 308658 310529 . - 0 ID=cds-WP_000969434.1;Parent=gene-CCO53_RS11715;Dbxref=GenBank:WP_000969434.1;Name=WP_000969434.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=CCO53_RS11715;product=peptidylprolyl isomerase;protein_id=WP_000969434.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 310820 311110 . - . ID=gene-CCO53_RS11720;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=CCO53_RS11720;old_locus_tag=CCO53_11705 NZ_NPLZ01000005.1 Protein Homology CDS 310820 311110 . - 0 ID=cds-WP_254888479.1;Parent=gene-CCO53_RS11720;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=CCO53_RS11720;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 311301 313655 . - . ID=gene-CCO53_RS11725;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CCO53_RS11725;old_locus_tag=CCO53_11710 NZ_NPLZ01000005.1 Protein Homology CDS 311301 313655 . - 0 ID=cds-WP_001067723.1;Parent=gene-CCO53_RS11725;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=CCO53_RS11725;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 313841 315112 . - . ID=gene-CCO53_RS11730;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CCO53_RS11730;old_locus_tag=CCO53_11715 NZ_NPLZ01000005.1 Protein Homology CDS 313841 315112 . - 0 ID=cds-WP_000130314.1;Parent=gene-CCO53_RS11730;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=CCO53_RS11730;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 315364 315987 . - . ID=gene-CCO53_RS11735;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CCO53_RS11735;old_locus_tag=CCO53_11720 NZ_NPLZ01000005.1 Protein Homology CDS 315364 315987 . - 0 ID=cds-WP_000122257.1;Parent=gene-CCO53_RS11735;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=CCO53_RS11735;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 316234 317532 . - . ID=gene-CCO53_RS11740;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CCO53_RS11740;old_locus_tag=CCO53_11725 NZ_NPLZ01000005.1 Protein Homology CDS 316234 317532 . - 0 ID=cds-WP_001198403.1;Parent=gene-CCO53_RS11740;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=CCO53_RS11740;product=trigger factor;protein_id=WP_001198403.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 317879 318196 . - . ID=gene-CCO53_RS11750;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=CCO53_RS11750;old_locus_tag=CCO53_11735 NZ_NPLZ01000005.1 Protein Homology CDS 317879 318196 . - 0 ID=cds-WP_000973433.1;Parent=gene-CCO53_RS11750;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=CCO53_RS11750;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 318500 319078 . + . ID=gene-CCO53_RS11760;Name=CCO53_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11760;old_locus_tag=CCO53_11745 NZ_NPLZ01000005.1 Protein Homology CDS 318500 319078 . + 0 ID=cds-WP_001537832.1;Parent=gene-CCO53_RS11760;Dbxref=GenBank:WP_001537832.1;Name=WP_001537832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=CCO53_RS11760;product=lipoprotein;protein_id=WP_001537832.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 319122 320597 . + . ID=gene-CCO53_RS11765;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=CCO53_RS11765;old_locus_tag=CCO53_11750 NZ_NPLZ01000005.1 Protein Homology CDS 319122 320597 . + 0 ID=cds-WP_058331283.1;Parent=gene-CCO53_RS11765;Dbxref=GenBank:WP_058331283.1;Name=WP_058331283.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=CCO53_RS11765;product=muropeptide MFS transporter AmpG;protein_id=WP_058331283.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 321050 322006 . + . ID=gene-CCO53_RS11770;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=CCO53_RS11770;old_locus_tag=CCO53_11755 NZ_NPLZ01000005.1 Protein Homology CDS 321050 322006 . + 0 ID=cds-WP_001239448.1;Parent=gene-CCO53_RS11770;Dbxref=GenBank:WP_001239448.1;Name=WP_001239448.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=CCO53_RS11770;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239448.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 322017 324008 . + . ID=gene-CCO53_RS11775;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=CCO53_RS11775;old_locus_tag=CCO53_11760 NZ_NPLZ01000005.1 Protein Homology CDS 322017 324008 . + 0 ID=cds-WP_000467158.1;Parent=gene-CCO53_RS11775;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=CCO53_RS11775;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 323998 324612 . + . ID=gene-CCO53_RS11780;Name=CCO53_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11780;old_locus_tag=CCO53_11765 NZ_NPLZ01000005.1 Protein Homology CDS 323998 324612 . + 0 ID=cds-WP_000179833.1;Parent=gene-CCO53_RS11780;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=CCO53_RS11780;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 324612 324941 . + . ID=gene-CCO53_RS11785;Name=CCO53_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11785;old_locus_tag=CCO53_11770 NZ_NPLZ01000005.1 Protein Homology CDS 324612 324941 . + 0 ID=cds-WP_000019878.1;Parent=gene-CCO53_RS11785;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=CCO53_RS11785;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 324953 325843 . + . ID=gene-CCO53_RS11790;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CCO53_RS11790;old_locus_tag=CCO53_11775 NZ_NPLZ01000005.1 Protein Homology CDS 324953 325843 . + 0 ID=cds-WP_000971352.1;Parent=gene-CCO53_RS11790;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=CCO53_RS11790;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 325891 327360 . - . ID=gene-CCO53_RS11795;Name=CCO53_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11795;old_locus_tag=CCO53_11780 NZ_NPLZ01000005.1 Protein Homology CDS 325891 327360 . - 0 ID=cds-WP_094887682.1;Parent=gene-CCO53_RS11795;Dbxref=GenBank:WP_094887682.1;Name=WP_094887682.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524005.1;locus_tag=CCO53_RS11795;product=SEL1-like repeat protein;protein_id=WP_094887682.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 327372 328883 . - . ID=gene-CCO53_RS11800;Name=CCO53_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11800;old_locus_tag=CCO53_11785 NZ_NPLZ01000005.1 Protein Homology CDS 327372 328883 . - 0 ID=cds-WP_094887683.1;Parent=gene-CCO53_RS11800;Dbxref=GenBank:WP_094887683.1;Name=WP_094887683.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=CCO53_RS11800;product=SEL1-like repeat protein;protein_id=WP_094887683.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq pseudogene 329058 329189 . + . ID=gene-CCO53_RS24015;Name=CCO53_RS24015;end_range=329189,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24015;partial=true;pseudo=true NZ_NPLZ01000005.1 Protein Homology CDS 329058 329189 . + 0 ID=cds-CCO53_RS24015;Parent=gene-CCO53_RS24015;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=329189,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=CCO53_RS24015;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 329420 330784 . + . ID=gene-CCO53_RS11810;Name=CCO53_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11810;old_locus_tag=CCO53_11795 NZ_NPLZ01000005.1 Protein Homology CDS 329420 330784 . + 0 ID=cds-WP_023218109.1;Parent=gene-CCO53_RS11810;Dbxref=GenBank:WP_023218109.1;Name=WP_023218109.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=CCO53_RS11810;product=MFS transporter;protein_id=WP_023218109.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 330831 331322 . - . ID=gene-CCO53_RS11815;Name=CCO53_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11815;old_locus_tag=CCO53_11800 NZ_NPLZ01000005.1 Protein Homology CDS 330831 331322 . - 0 ID=cds-WP_001138913.1;Parent=gene-CCO53_RS11815;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO53_RS11815;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 331448 332359 . + . ID=gene-CCO53_RS11820;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=CCO53_RS11820;old_locus_tag=CCO53_11805 NZ_NPLZ01000005.1 Protein Homology CDS 331448 332359 . + 0 ID=cds-WP_000705816.1;Parent=gene-CCO53_RS11820;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=CCO53_RS11820;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 332322 332912 . + . ID=gene-CCO53_RS11825;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=CCO53_RS11825;old_locus_tag=CCO53_11810 NZ_NPLZ01000005.1 Protein Homology CDS 332322 332912 . + 0 ID=cds-WP_094887684.1;Parent=gene-CCO53_RS11825;Dbxref=GenBank:WP_094887684.1;Name=WP_094887684.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=CCO53_RS11825;product=protein deglycase YajL;protein_id=WP_094887684.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 333022 333810 . - . ID=gene-CCO53_RS11830;Name=CCO53_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11830;old_locus_tag=CCO53_11815 NZ_NPLZ01000005.1 Protein Homology CDS 333022 333810 . - 0 ID=cds-WP_000401424.1;Parent=gene-CCO53_RS11830;Dbxref=GenBank:WP_000401424.1;Name=WP_000401424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401424.1;locus_tag=CCO53_RS11830;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000401424.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 333821 334369 . - . ID=gene-CCO53_RS11835;Name=CCO53_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11835;old_locus_tag=CCO53_11820 NZ_NPLZ01000005.1 Protein Homology CDS 333821 334369 . - 0 ID=cds-WP_001533962.1;Parent=gene-CCO53_RS11835;Dbxref=GenBank:WP_001533962.1;Name=WP_001533962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533962.1;locus_tag=CCO53_RS11835;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001533962.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 334372 336705 . - . ID=gene-CCO53_RS11840;Name=CCO53_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11840;old_locus_tag=CCO53_11825 NZ_NPLZ01000005.1 Protein Homology CDS 334372 336705 . - 0 ID=cds-WP_000387839.1;Parent=gene-CCO53_RS11840;Dbxref=GenBank:WP_000387839.1;Name=WP_000387839.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387839.1;locus_tag=CCO53_RS11840;product=molybdopterin-containing oxidoreductase family protein;protein_id=WP_000387839.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 336873 337559 . + . ID=gene-CCO53_RS11845;Name=CCO53_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11845;old_locus_tag=CCO53_11830 NZ_NPLZ01000005.1 Protein Homology CDS 336873 337559 . + 0 ID=cds-WP_000808044.1;Parent=gene-CCO53_RS11845;Dbxref=GenBank:WP_000808044.1;Name=WP_000808044.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808044.1;locus_tag=CCO53_RS11845;product=helix-turn-helix domain-containing protein;protein_id=WP_000808044.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 337607 339055 . - . ID=gene-CCO53_RS11850;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CCO53_RS11850;old_locus_tag=CCO53_11835 NZ_NPLZ01000005.1 Protein Homology CDS 337607 339055 . - 0 ID=cds-WP_000668648.1;Parent=gene-CCO53_RS11850;Dbxref=GenBank:WP_000668648.1;Name=WP_000668648.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=CCO53_RS11850;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668648.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 339265 339507 . + . ID=gene-CCO53_RS11855;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CCO53_RS11855;old_locus_tag=CCO53_11840 NZ_NPLZ01000005.1 Protein Homology CDS 339265 339507 . + 0 ID=cds-WP_001124944.1;Parent=gene-CCO53_RS11855;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=CCO53_RS11855;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 339508 340407 . + . ID=gene-CCO53_RS11860;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=CCO53_RS11860;old_locus_tag=CCO53_11845 NZ_NPLZ01000005.1 Protein Homology CDS 339508 340407 . + 0 ID=cds-WP_000348073.1;Parent=gene-CCO53_RS11860;Dbxref=GenBank:WP_000348073.1;Name=WP_000348073.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=CCO53_RS11860;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348073.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 340431 342293 . + . ID=gene-CCO53_RS11865;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CCO53_RS11865;old_locus_tag=CCO53_11850 NZ_NPLZ01000005.1 Protein Homology CDS 340431 342293 . + 0 ID=cds-WP_000006778.1;Parent=gene-CCO53_RS11865;Dbxref=GenBank:WP_000006778.1;Name=WP_000006778.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=CCO53_RS11865;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006778.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 342350 343324 . + . ID=gene-CCO53_RS11870;Name=CCO53_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11870;old_locus_tag=CCO53_11855 NZ_NPLZ01000005.1 Protein Homology CDS 342350 343324 . + 0 ID=cds-WP_001199869.1;Parent=gene-CCO53_RS11870;Dbxref=GenBank:WP_001199869.1;Name=WP_001199869.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=CCO53_RS11870;product=aldo/keto reductase;protein_id=WP_001199869.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq pseudogene 343332 343423 . + . ID=gene-CCO53_RS24365;Name=CCO53_RS24365;end_range=343423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24365;partial=true;pseudo=true;start_range=.,343332 NZ_NPLZ01000005.1 Protein Homology CDS 343332 343423 . + 0 ID=cds-CCO53_RS24365;Parent=gene-CCO53_RS24365;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=343423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO53_RS24365;partial=true;product=hypothetical protein;pseudo=true;start_range=.,343332;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 343428 343943 . - . ID=gene-CCO53_RS11875;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=CCO53_RS11875;old_locus_tag=CCO53_11860 NZ_NPLZ01000005.1 Protein Homology CDS 343428 343943 . - 0 ID=cds-WP_000154063.1;Parent=gene-CCO53_RS11875;Dbxref=GenBank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=CCO53_RS11875;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 343921 344901 . - . ID=gene-CCO53_RS11880;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CCO53_RS11880;old_locus_tag=CCO53_11865 NZ_NPLZ01000005.1 Protein Homology CDS 343921 344901 . - 0 ID=cds-WP_000752133.1;Parent=gene-CCO53_RS11880;Dbxref=GenBank:WP_000752133.1;Name=WP_000752133.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=CCO53_RS11880;product=thiamine-phosphate kinase;protein_id=WP_000752133.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 344980 345399 . - . ID=gene-CCO53_RS11885;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CCO53_RS11885;old_locus_tag=CCO53_11870 NZ_NPLZ01000005.1 Protein Homology CDS 344980 345399 . - 0 ID=cds-WP_000801129.1;Parent=gene-CCO53_RS11885;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=CCO53_RS11885;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 345420 345890 . - . ID=gene-CCO53_RS11890;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=CCO53_RS11890;old_locus_tag=CCO53_11875 NZ_NPLZ01000005.1 Protein Homology CDS 345420 345890 . - 0 ID=cds-WP_001021372.1;Parent=gene-CCO53_RS11890;Dbxref=GenBank:WP_001021372.1;Name=WP_001021372.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=CCO53_RS11890;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021372.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 345979 347082 . - . ID=gene-CCO53_RS11895;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CCO53_RS11895;old_locus_tag=CCO53_11880 NZ_NPLZ01000005.1 Protein Homology CDS 345979 347082 . - 0 ID=cds-WP_001150218.1;Parent=gene-CCO53_RS11895;Dbxref=GenBank:WP_001150218.1;Name=WP_001150218.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=CCO53_RS11895;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150218.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 347086 347535 . - . ID=gene-CCO53_RS11900;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CCO53_RS11900;old_locus_tag=CCO53_11885 NZ_NPLZ01000005.1 Protein Homology CDS 347086 347535 . - 0 ID=cds-WP_000543533.1;Parent=gene-CCO53_RS11900;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=CCO53_RS11900;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 347687 348226 . + . ID=gene-CCO53_RS11905;Name=CCO53_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11905;old_locus_tag=CCO53_11890 NZ_NPLZ01000005.1 Protein Homology CDS 347687 348226 . + 0 ID=cds-WP_000198486.1;Parent=gene-CCO53_RS11905;Dbxref=GenBank:WP_000198486.1;Name=WP_000198486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=CCO53_RS11905;product=DUF3251 domain-containing protein;protein_id=WP_000198486.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 348526 349389 . + . ID=gene-CCO53_RS11910;Name=CCO53_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11910;old_locus_tag=CCO53_11895 NZ_NPLZ01000005.1 Protein Homology CDS 348526 349389 . + 0 ID=cds-WP_000752021.1;Parent=gene-CCO53_RS11910;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=CCO53_RS11910;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11 NZ_NPLZ01000005.1 RefSeq gene 349473 349580 . - . ID=gene-CCO53_RS23670;Name=CCO53_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23670 NZ_NPLZ01000005.1 Protein Homology CDS 349473 349580 . - 0 ID=cds-WP_000176312.1;Parent=gene-CCO53_RS23670;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=CCO53_RS23670;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 ##sequence-region NZ_NPLZ01000006.1 1 346107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000006.1 RefSeq region 1 346107 . + . ID=NZ_NPLZ01000006.1:1..346107;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000006.1 RefSeq pseudogene 1 117 . + . ID=gene-CCO53_RS11920;Name=CCO53_RS11920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS11920;partial=true;pseudo=true;start_range=.,1 NZ_NPLZ01000006.1 Protein Homology CDS 1 117 . + 0 ID=cds-CCO53_RS11920;Parent=gene-CCO53_RS11920;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=CCO53_RS11920;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 207 473 . - . ID=gene-CCO53_RS11925;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=CCO53_RS11925;old_locus_tag=CCO53_11905 NZ_NPLZ01000006.1 Protein Homology CDS 207 473 . - 0 ID=cds-WP_001185666.1;Parent=gene-CCO53_RS11925;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=CCO53_RS11925;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 477 1289 . - . ID=gene-CCO53_RS11930;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=CCO53_RS11930;old_locus_tag=CCO53_11910 NZ_NPLZ01000006.1 Protein Homology CDS 477 1289 . - 0 ID=cds-WP_000101047.1;Parent=gene-CCO53_RS11930;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=CCO53_RS11930;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 1313 2020 . - . ID=gene-CCO53_RS11935;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=CCO53_RS11935;old_locus_tag=CCO53_11915 NZ_NPLZ01000006.1 Protein Homology CDS 1313 2020 . - 0 ID=cds-WP_000072527.1;Parent=gene-CCO53_RS11935;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=CCO53_RS11935;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 2146 2439 . + . ID=gene-CCO53_RS11940;Name=CCO53_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11940;old_locus_tag=CCO53_11920 NZ_NPLZ01000006.1 Protein Homology CDS 2146 2439 . + 0 ID=cds-WP_001525604.1;Parent=gene-CCO53_RS11940;Dbxref=GenBank:WP_001525604.1;Name=WP_001525604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=CCO53_RS11940;product=YcgL domain-containing protein;protein_id=WP_001525604.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 2489 3148 . + . ID=gene-CCO53_RS11945;Name=CCO53_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11945;old_locus_tag=CCO53_11925 NZ_NPLZ01000006.1 Protein Homology CDS 2489 3148 . + 0 ID=cds-WP_058331824.1;Parent=gene-CCO53_RS11945;Dbxref=GenBank:WP_058331824.1;Name=WP_058331824.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=CCO53_RS11945;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_058331824.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 3241 3687 . + . ID=gene-CCO53_RS11950;Name=CCO53_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11950;old_locus_tag=CCO53_11930 NZ_NPLZ01000006.1 Protein Homology CDS 3241 3687 . + 0 ID=cds-WP_001285703.1;Parent=gene-CCO53_RS11950;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=CCO53_RS11950;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 4039 4176 . + . ID=gene-CCO53_RS11955;Name=CCO53_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11955;old_locus_tag=CCO53_11935 NZ_NPLZ01000006.1 Protein Homology CDS 4039 4176 . + 0 ID=cds-WP_001519337.1;Parent=gene-CCO53_RS11955;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=CCO53_RS11955;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 4368 4541 . + . ID=gene-CCO53_RS11960;Name=CCO53_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11960;old_locus_tag=CCO53_11940 NZ_NPLZ01000006.1 Protein Homology CDS 4368 4541 . + 0 ID=cds-WP_001083582.1;Parent=gene-CCO53_RS11960;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=CCO53_RS11960;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 4613 4954 . - . ID=gene-CCO53_RS11965;Name=CCO53_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11965;old_locus_tag=CCO53_11945 NZ_NPLZ01000006.1 Protein Homology CDS 4613 4954 . - 0 ID=cds-WP_000018967.1;Parent=gene-CCO53_RS11965;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=CCO53_RS11965;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 5063 5593 . - . ID=gene-CCO53_RS11970;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=CCO53_RS11970;old_locus_tag=CCO53_11950 NZ_NPLZ01000006.1 Protein Homology CDS 5063 5593 . - 0 ID=cds-WP_000943475.1;Parent=gene-CCO53_RS11970;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=CCO53_RS11970;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 5735 7279 . - . ID=gene-CCO53_RS11975;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=CCO53_RS11975;old_locus_tag=CCO53_11955 NZ_NPLZ01000006.1 Protein Homology CDS 5735 7279 . - 0 ID=cds-WP_023201419.1;Parent=gene-CCO53_RS11975;Dbxref=GenBank:WP_023201419.1;Name=WP_023201419.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=CCO53_RS11975;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_023201419.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 7499 8218 . + . ID=gene-CCO53_RS11980;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=CCO53_RS11980;old_locus_tag=CCO53_11960 NZ_NPLZ01000006.1 Protein Homology CDS 7499 8218 . + 0 ID=cds-WP_000234826.1;Parent=gene-CCO53_RS11980;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=CCO53_RS11980;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 8265 9797 . - . ID=gene-CCO53_RS11985;Name=CCO53_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11985;old_locus_tag=CCO53_11965 NZ_NPLZ01000006.1 Protein Homology CDS 8265 9797 . - 0 ID=cds-WP_000190832.1;Parent=gene-CCO53_RS11985;Dbxref=GenBank:WP_000190832.1;Name=WP_000190832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=CCO53_RS11985;product=SpoVR family protein;protein_id=WP_000190832.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 10120 11418 . + . ID=gene-CCO53_RS11990;Name=CCO53_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS11990;old_locus_tag=CCO53_11970 NZ_NPLZ01000006.1 Protein Homology CDS 10120 11418 . + 0 ID=cds-WP_094887685.1;Parent=gene-CCO53_RS11990;Dbxref=GenBank:WP_094887685.1;Name=WP_094887685.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=CCO53_RS11990;product=D-amino acid dehydrogenase;protein_id=WP_094887685.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 11432 12502 . + . ID=gene-CCO53_RS11995;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=CCO53_RS11995;old_locus_tag=CCO53_11975 NZ_NPLZ01000006.1 Protein Homology CDS 11432 12502 . + 0 ID=cds-WP_000197909.1;Parent=gene-CCO53_RS11995;Dbxref=GenBank:WP_000197909.1;Name=WP_000197909.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=CCO53_RS11995;product=catabolic alanine racemase DadX;protein_id=WP_000197909.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 12564 14297 . - . ID=gene-CCO53_RS12000;Name=CCO53_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12000;old_locus_tag=CCO53_11980 NZ_NPLZ01000006.1 Protein Homology CDS 12564 14297 . - 0 ID=cds-WP_000338376.1;Parent=gene-CCO53_RS12000;Dbxref=GenBank:WP_000338376.1;Name=WP_000338376.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460757.1;locus_tag=CCO53_RS12000;product=potassium/proton antiporter;protein_id=WP_000338376.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 14394 15308 . - . ID=gene-CCO53_RS12005;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=CCO53_RS12005;old_locus_tag=CCO53_11985 NZ_NPLZ01000006.1 Protein Homology CDS 14394 15308 . - 0 ID=cds-WP_023242519.1;Parent=gene-CCO53_RS12005;Dbxref=GenBank:WP_023242519.1;Name=WP_023242519.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=CCO53_RS12005;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_023242519.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 15479 16090 . + . ID=gene-CCO53_RS12010;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=CCO53_RS12010;old_locus_tag=CCO53_11990 NZ_NPLZ01000006.1 Protein Homology CDS 15479 16090 . + 0 ID=cds-WP_000776974.1;Parent=gene-CCO53_RS12010;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=CCO53_RS12010;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 16104 16838 . - . ID=gene-CCO53_RS12015;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=CCO53_RS12015;old_locus_tag=CCO53_11995 NZ_NPLZ01000006.1 Protein Homology CDS 16104 16838 . - 0 ID=cds-WP_000017423.1;Parent=gene-CCO53_RS12015;Dbxref=GenBank:WP_000017423.1;Name=WP_000017423.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=CCO53_RS12015;product=flagellar brake protein YcgR;protein_id=WP_000017423.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 17007 17261 . + . ID=gene-CCO53_RS12020;Name=CCO53_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12020;old_locus_tag=CCO53_12000 NZ_NPLZ01000006.1 Protein Homology CDS 17007 17261 . + 0 ID=cds-WP_000511323.1;Parent=gene-CCO53_RS12020;Dbxref=GenBank:WP_000511323.1;Name=WP_000511323.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=CCO53_RS12020;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511323.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 17324 19036 . - . ID=gene-CCO53_RS12025;Name=CCO53_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12025;old_locus_tag=CCO53_12005 NZ_NPLZ01000006.1 Protein Homology CDS 17324 19036 . - 0 ID=cds-WP_000612830.1;Parent=gene-CCO53_RS12025;Dbxref=GenBank:WP_000612830.1;Name=WP_000612830.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=CCO53_RS12025;product=alpha%2Calpha-trehalase;protein_id=WP_000612830.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 19250 20524 . - . ID=gene-CCO53_RS12030;Name=CCO53_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12030;old_locus_tag=CCO53_12010 NZ_NPLZ01000006.1 Protein Homology CDS 19250 20524 . - 0 ID=cds-WP_001526439.1;Parent=gene-CCO53_RS12030;Dbxref=GenBank:WP_001526439.1;Name=WP_001526439.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=CCO53_RS12030;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001526439.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 20919 21008 . - . ID=gene-CCO53_RS12035;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=CCO53_RS12035;old_locus_tag=CCO53_12015 NZ_NPLZ01000006.1 Protein Homology CDS 20919 21008 . - 0 ID=cds-WP_000270301.1;Parent=gene-CCO53_RS12035;Dbxref=GenBank:WP_000270301.1;Name=WP_000270301.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=CCO53_RS12035;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270301.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 21021 22157 . - . ID=gene-CCO53_RS12040;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=CCO53_RS12040;old_locus_tag=CCO53_12020 NZ_NPLZ01000006.1 Protein Homology CDS 21021 22157 . - 0 ID=cds-WP_000888110.1;Parent=gene-CCO53_RS12040;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=CCO53_RS12040;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 22169 23713 . - . ID=gene-CCO53_RS12045;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=CCO53_RS12045;old_locus_tag=CCO53_12025 NZ_NPLZ01000006.1 Protein Homology CDS 22169 23713 . - 0 ID=cds-WP_000263615.1;Parent=gene-CCO53_RS12045;Dbxref=GenBank:WP_000263615.1;Name=WP_000263615.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=CCO53_RS12045;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263615.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 23788 24636 . - . ID=gene-CCO53_RS12050;Name=CCO53_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12050;old_locus_tag=CCO53_12030 NZ_NPLZ01000006.1 Protein Homology CDS 23788 24636 . - 0 ID=cds-WP_000063377.1;Parent=gene-CCO53_RS12050;Dbxref=GenBank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=CCO53_RS12050;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 24633 25037 . - . ID=gene-CCO53_RS12055;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=CCO53_RS12055;old_locus_tag=CCO53_12035 NZ_NPLZ01000006.1 Protein Homology CDS 24633 25037 . - 0 ID=cds-WP_001262580.1;Parent=gene-CCO53_RS12055;Dbxref=GenBank:WP_001262580.1;Name=WP_001262580.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=CCO53_RS12055;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262580.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 25027 25623 . - . ID=gene-CCO53_RS12060;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=CCO53_RS12060;old_locus_tag=CCO53_12040 NZ_NPLZ01000006.1 Protein Homology CDS 25027 25623 . - 0 ID=cds-WP_023254289.1;Parent=gene-CCO53_RS12060;Dbxref=GenBank:WP_023254289.1;Name=WP_023254289.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=CCO53_RS12060;product=hydrogenase 1 maturation protease;protein_id=WP_023254289.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 25620 26351 . - . ID=gene-CCO53_RS12065;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=CCO53_RS12065;old_locus_tag=CCO53_12045 NZ_NPLZ01000006.1 Protein Homology CDS 25620 26351 . - 0 ID=cds-WP_000147029.1;Parent=gene-CCO53_RS12065;Dbxref=GenBank:WP_000147029.1;Name=WP_000147029.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=CCO53_RS12065;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147029.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 26370 28163 . - . ID=gene-CCO53_RS12070;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=CCO53_RS12070;old_locus_tag=CCO53_12050 NZ_NPLZ01000006.1 Protein Homology CDS 26370 28163 . - 0 ID=cds-WP_000070982.1;Parent=gene-CCO53_RS12070;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=CCO53_RS12070;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 28160 29278 . - . ID=gene-CCO53_RS12075;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=CCO53_RS12075;old_locus_tag=CCO53_12055 NZ_NPLZ01000006.1 Protein Homology CDS 28160 29278 . - 0 ID=cds-WP_058331823.1;Parent=gene-CCO53_RS12075;Dbxref=GenBank:WP_058331823.1;Name=WP_058331823.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=CCO53_RS12075;product=hydrogenase 1 small subunit;protein_id=WP_058331823.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq pseudogene 29627 29698 . - . ID=gene-CCO53_RS24370;Name=CCO53_RS24370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24370;partial=true;pseudo=true;start_range=.,29627 NZ_NPLZ01000006.1 Protein Homology CDS 29627 29698 . - 0 ID=cds-CCO53_RS24370;Parent=gene-CCO53_RS24370;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135374.1;locus_tag=CCO53_RS24370;partial=true;product=hypothetical protein;pseudo=true;start_range=.,29627;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 30193 30648 . - . ID=gene-CCO53_RS12080;Name=CCO53_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12080;old_locus_tag=CCO53_12060 NZ_NPLZ01000006.1 Protein Homology CDS 30193 30648 . - 0 ID=cds-WP_000487338.1;Parent=gene-CCO53_RS12080;Dbxref=GenBank:WP_000487338.1;Name=WP_000487338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=CCO53_RS12080;product=hypothetical protein;protein_id=WP_000487338.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 30687 31307 . - . ID=gene-CCO53_RS12085;Name=CCO53_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12085;old_locus_tag=CCO53_12065 NZ_NPLZ01000006.1 Protein Homology CDS 30687 31307 . - 0 ID=cds-WP_024146062.1;Parent=gene-CCO53_RS12085;Dbxref=GenBank:WP_024146062.1;Name=WP_024146062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=CCO53_RS12085;product=hypothetical protein;protein_id=WP_024146062.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 32066 33157 . - . ID=gene-CCO53_RS12090;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CCO53_RS12090;old_locus_tag=CCO53_12070 NZ_NPLZ01000006.1 Protein Homology CDS 32066 33157 . - 0 ID=cds-WP_000505850.1;Parent=gene-CCO53_RS12090;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=CCO53_RS12090;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 33274 33858 . - . ID=gene-CCO53_RS12095;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CCO53_RS12095;old_locus_tag=CCO53_12075 NZ_NPLZ01000006.1 Protein Homology CDS 33274 33858 . - 0 ID=cds-WP_023201414.1;Parent=gene-CCO53_RS12095;Dbxref=GenBank:WP_023201414.1;Name=WP_023201414.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=CCO53_RS12095;product=aminoacyl-tRNA hydrolase;protein_id=WP_023201414.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 34134 34412 . + . ID=gene-CCO53_RS12100;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=CCO53_RS12100;old_locus_tag=CCO53_12080 NZ_NPLZ01000006.1 Protein Homology CDS 34134 34412 . + 0 ID=cds-WP_000823878.1;Parent=gene-CCO53_RS12100;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=CCO53_RS12100;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 34457 36142 . - . ID=gene-CCO53_RS12105;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=CCO53_RS12105;old_locus_tag=CCO53_12085 NZ_NPLZ01000006.1 Protein Homology CDS 34457 36142 . - 0 ID=cds-WP_023209843.1;Parent=gene-CCO53_RS12105;Dbxref=GenBank:WP_023209843.1;Name=WP_023209843.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=CCO53_RS12105;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_023209843.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 36267 37214 . - . ID=gene-CCO53_RS12110;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=CCO53_RS12110;old_locus_tag=CCO53_12090 NZ_NPLZ01000006.1 Protein Homology CDS 36267 37214 . - 0 ID=cds-WP_001518537.1;Parent=gene-CCO53_RS12110;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=CCO53_RS12110;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 37480 38331 . - . ID=gene-CCO53_RS12115;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CCO53_RS12115;old_locus_tag=CCO53_12095 NZ_NPLZ01000006.1 Protein Homology CDS 37480 38331 . - 0 ID=cds-WP_000988253.1;Parent=gene-CCO53_RS12115;Dbxref=GenBank:WP_000988253.1;Name=WP_000988253.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=CCO53_RS12115;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988253.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 38328 38951 . - . ID=gene-CCO53_RS12120;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=CCO53_RS12120;old_locus_tag=CCO53_12100 NZ_NPLZ01000006.1 Protein Homology CDS 38328 38951 . - 0 ID=cds-WP_058331767.1;Parent=gene-CCO53_RS12120;Dbxref=GenBank:WP_058331767.1;Name=WP_058331767.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=CCO53_RS12120;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_058331767.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 39265 40521 . + . ID=gene-CCO53_RS12125;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CCO53_RS12125;old_locus_tag=CCO53_12105 NZ_NPLZ01000006.1 Protein Homology CDS 39265 40521 . + 0 ID=cds-WP_000173208.1;Parent=gene-CCO53_RS12125;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=CCO53_RS12125;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 40562 41644 . + . ID=gene-CCO53_RS12130;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CCO53_RS12130;old_locus_tag=CCO53_12110 NZ_NPLZ01000006.1 Protein Homology CDS 40562 41644 . + 0 ID=cds-WP_000804703.1;Parent=gene-CCO53_RS12130;Dbxref=GenBank:WP_000804703.1;Name=WP_000804703.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=CCO53_RS12130;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 41644 42477 . + . ID=gene-CCO53_RS12135;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CCO53_RS12135;old_locus_tag=CCO53_12115 NZ_NPLZ01000006.1 Protein Homology CDS 41644 42477 . + 0 ID=cds-WP_000347310.1;Parent=gene-CCO53_RS12135;Dbxref=GenBank:WP_000347310.1;Name=WP_000347310.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=CCO53_RS12135;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000347310.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 42474 42863 . + . ID=gene-CCO53_RS12140;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=CCO53_RS12140;old_locus_tag=CCO53_12120 NZ_NPLZ01000006.1 Protein Homology CDS 42474 42863 . + 0 ID=cds-WP_000150667.1;Parent=gene-CCO53_RS12140;Dbxref=GenBank:WP_000150667.1;Name=WP_000150667.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=CCO53_RS12140;product=invasion regulator SirB2;protein_id=WP_000150667.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 42867 43676 . + . ID=gene-CCO53_RS12145;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=CCO53_RS12145;old_locus_tag=CCO53_12125 NZ_NPLZ01000006.1 Protein Homology CDS 42867 43676 . + 0 ID=cds-WP_001257065.1;Parent=gene-CCO53_RS12145;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=CCO53_RS12145;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 43714 44568 . + . ID=gene-CCO53_RS12150;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CCO53_RS12150;old_locus_tag=CCO53_12130 NZ_NPLZ01000006.1 Protein Homology CDS 43714 44568 . + 0 ID=cds-WP_000811046.1;Parent=gene-CCO53_RS12150;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=CCO53_RS12150;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 44622 45722 . - . ID=gene-CCO53_RS12155;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=CCO53_RS12155;old_locus_tag=CCO53_12135 NZ_NPLZ01000006.1 Protein Homology CDS 44622 45722 . - 0 ID=cds-WP_000148418.1;Parent=gene-CCO53_RS12155;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=CCO53_RS12155;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 45989 46219 . + . ID=gene-CCO53_RS12160;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=CCO53_RS12160;old_locus_tag=CCO53_12140 NZ_NPLZ01000006.1 Protein Homology CDS 45989 46219 . + 0 ID=cds-WP_001146392.1;Parent=gene-CCO53_RS12160;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=CCO53_RS12160;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 46299 46652 . - . ID=gene-CCO53_RS12165;Name=CCO53_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12165;old_locus_tag=CCO53_12145 NZ_NPLZ01000006.1 Protein Homology CDS 46299 46652 . - 0 ID=cds-WP_001179794.1;Parent=gene-CCO53_RS12165;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=CCO53_RS12165;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 46829 48253 . + . ID=gene-CCO53_RS12170;Name=CCO53_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12170;old_locus_tag=CCO53_12150 NZ_NPLZ01000006.1 Protein Homology CDS 46829 48253 . + 0 ID=cds-WP_001116346.1;Parent=gene-CCO53_RS12170;Dbxref=GenBank:WP_001116346.1;Name=WP_001116346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=CCO53_RS12170;product=YchO/YchP family invasin;protein_id=WP_001116346.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 48254 48904 . - . ID=gene-CCO53_RS12175;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=CCO53_RS12175;old_locus_tag=CCO53_12155 NZ_NPLZ01000006.1 Protein Homology CDS 48254 48904 . - 0 ID=cds-WP_001064598.1;Parent=gene-CCO53_RS12175;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=CCO53_RS12175;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 48897 50693 . - . ID=gene-CCO53_RS12180;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=CCO53_RS12180;old_locus_tag=CCO53_12160 NZ_NPLZ01000006.1 Protein Homology CDS 48897 50693 . - 0 ID=cds-WP_000476244.1;Parent=gene-CCO53_RS12180;Dbxref=GenBank:WP_000476244.1;Name=WP_000476244.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=CCO53_RS12180;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476244.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 51034 52431 . + . ID=gene-CCO53_RS12190;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=CCO53_RS12190;old_locus_tag=CCO53_12170 NZ_NPLZ01000006.1 Protein Homology CDS 51034 52431 . + 0 ID=cds-WP_000019848.1;Parent=gene-CCO53_RS12190;Dbxref=GenBank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=CCO53_RS12190;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 52819 56562 . + . ID=gene-CCO53_RS12195;Name=CCO53_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12195;old_locus_tag=CCO53_12175 NZ_NPLZ01000006.1 Protein Homology CDS 52819 56562 . + 0 ID=cds-WP_080197843.1;Parent=gene-CCO53_RS12195;Dbxref=GenBank:WP_080197843.1;Name=WP_080197843.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=CCO53_RS12195;product=nitrate reductase subunit alpha;protein_id=WP_080197843.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 56559 58094 . + . ID=gene-CCO53_RS12200;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO53_RS12200;old_locus_tag=CCO53_12180 NZ_NPLZ01000006.1 Protein Homology CDS 56559 58094 . + 0 ID=cds-WP_000702629.1;Parent=gene-CCO53_RS12200;Dbxref=GenBank:WP_000702629.1;Name=WP_000702629.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=CCO53_RS12200;product=nitrate reductase subunit beta;protein_id=WP_000702629.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 58091 58801 . + . ID=gene-CCO53_RS12205;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=CCO53_RS12205;old_locus_tag=CCO53_12185 NZ_NPLZ01000006.1 Protein Homology CDS 58091 58801 . + 0 ID=cds-WP_000571667.1;Parent=gene-CCO53_RS12205;Dbxref=GenBank:WP_000571667.1;Name=WP_000571667.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=CCO53_RS12205;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571667.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 58801 59478 . + . ID=gene-CCO53_RS12210;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO53_RS12210;old_locus_tag=CCO53_12190 NZ_NPLZ01000006.1 Protein Homology CDS 58801 59478 . + 0 ID=cds-WP_000545594.1;Parent=gene-CCO53_RS12210;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=CCO53_RS12210;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 59720 61249 . + . ID=gene-CCO53_RS12220;Name=CCO53_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12220;old_locus_tag=CCO53_12200 NZ_NPLZ01000006.1 Protein Homology CDS 59720 61249 . + 0 ID=cds-WP_001212708.1;Parent=gene-CCO53_RS12220;Dbxref=GenBank:WP_001212708.1;Name=WP_001212708.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=CCO53_RS12220;product=tetratricopeptide repeat protein;protein_id=WP_001212708.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 61352 61483 . - . ID=gene-CCO53_RS12225;Name=CCO53_RS12225;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO53_RS12225;old_locus_tag=CCO53_12205 NZ_NPLZ01000006.1 cmsearch ncRNA 61352 61483 . - . ID=rna-CCO53_RS12225;Parent=gene-CCO53_RS12225;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS12225;product=RtT sRNA NZ_NPLZ01000006.1 cmsearch exon 61352 61483 . - . ID=exon-CCO53_RS12225-1;Parent=rna-CCO53_RS12225;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS12225;product=RtT sRNA NZ_NPLZ01000006.1 RefSeq gene 61527 61658 . - . ID=gene-CCO53_RS12230;Name=CCO53_RS12230;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO53_RS12230;old_locus_tag=CCO53_12210 NZ_NPLZ01000006.1 cmsearch ncRNA 61527 61658 . - . ID=rna-CCO53_RS12230;Parent=gene-CCO53_RS12230;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS12230;product=RtT sRNA NZ_NPLZ01000006.1 cmsearch exon 61527 61658 . - . ID=exon-CCO53_RS12230-1;Parent=rna-CCO53_RS12230;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS12230;product=RtT sRNA NZ_NPLZ01000006.1 RefSeq gene 61703 61833 . - . ID=gene-CCO53_RS12235;Name=CCO53_RS12235;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO53_RS12235;old_locus_tag=CCO53_12215 NZ_NPLZ01000006.1 cmsearch ncRNA 61703 61833 . - . ID=rna-CCO53_RS12235;Parent=gene-CCO53_RS12235;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS12235;product=RtT sRNA NZ_NPLZ01000006.1 cmsearch exon 61703 61833 . - . ID=exon-CCO53_RS12235-1;Parent=rna-CCO53_RS12235;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS12235;product=RtT sRNA NZ_NPLZ01000006.1 RefSeq gene 61884 61968 . - . ID=gene-CCO53_RS12240;Name=CCO53_RS12240;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS12240;old_locus_tag=CCO53_12220 NZ_NPLZ01000006.1 tRNAscan-SE tRNA 61884 61968 . - . ID=rna-CCO53_RS12240;Parent=gene-CCO53_RS12240;anticodon=(pos:complement(61932..61934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS12240;product=tRNA-Tyr NZ_NPLZ01000006.1 tRNAscan-SE exon 61884 61968 . - . ID=exon-CCO53_RS12240-1;Parent=rna-CCO53_RS12240;anticodon=(pos:complement(61932..61934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS12240;product=tRNA-Tyr NZ_NPLZ01000006.1 RefSeq gene 62003 62134 . - . ID=gene-CCO53_RS12245;Name=CCO53_RS12245;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO53_RS12245;old_locus_tag=CCO53_12225 NZ_NPLZ01000006.1 cmsearch ncRNA 62003 62134 . - . ID=rna-CCO53_RS12245;Parent=gene-CCO53_RS12245;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS12245;product=RtT sRNA NZ_NPLZ01000006.1 cmsearch exon 62003 62134 . - . ID=exon-CCO53_RS12245-1;Parent=rna-CCO53_RS12245;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS12245;product=RtT sRNA NZ_NPLZ01000006.1 RefSeq gene 62179 62263 . - . ID=gene-CCO53_RS12250;Name=CCO53_RS12250;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS12250;old_locus_tag=CCO53_12230 NZ_NPLZ01000006.1 tRNAscan-SE tRNA 62179 62263 . - . ID=rna-CCO53_RS12250;Parent=gene-CCO53_RS12250;anticodon=(pos:complement(62227..62229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS12250;product=tRNA-Tyr NZ_NPLZ01000006.1 tRNAscan-SE exon 62179 62263 . - . ID=exon-CCO53_RS12250-1;Parent=rna-CCO53_RS12250;anticodon=(pos:complement(62227..62229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS12250;product=tRNA-Tyr NZ_NPLZ01000006.1 RefSeq gene 62292 62433 . - . ID=gene-CCO53_RS12255;Name=CCO53_RS12255;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO53_RS12255;old_locus_tag=CCO53_12235 NZ_NPLZ01000006.1 cmsearch ncRNA 62292 62433 . - . ID=rna-CCO53_RS12255;Parent=gene-CCO53_RS12255;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS12255;product=RtT sRNA NZ_NPLZ01000006.1 cmsearch exon 62292 62433 . - . ID=exon-CCO53_RS12255-1;Parent=rna-CCO53_RS12255;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS12255;product=RtT sRNA NZ_NPLZ01000006.1 RefSeq gene 62604 63446 . - . ID=gene-CCO53_RS12260;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=CCO53_RS12260;old_locus_tag=CCO53_12240 NZ_NPLZ01000006.1 Protein Homology CDS 62604 63446 . - 0 ID=cds-WP_001191156.1;Parent=gene-CCO53_RS12260;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=CCO53_RS12260;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 63497 63955 . - . ID=gene-CCO53_RS12265;Name=CCO53_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12265;old_locus_tag=CCO53_12245 NZ_NPLZ01000006.1 Protein Homology CDS 63497 63955 . - 0 ID=cds-WP_001540172.1;Parent=gene-CCO53_RS12265;Dbxref=GenBank:WP_001540172.1;Name=WP_001540172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=CCO53_RS12265;product=YchJ family protein;protein_id=WP_001540172.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 64066 64971 . + . ID=gene-CCO53_RS12270;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=CCO53_RS12270;old_locus_tag=CCO53_12250 NZ_NPLZ01000006.1 Protein Homology CDS 64066 64971 . + 0 ID=cds-WP_001230575.1;Parent=gene-CCO53_RS12270;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=CCO53_RS12270;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 65062 66075 . + . ID=gene-CCO53_RS12275;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=CCO53_RS12275;old_locus_tag=CCO53_12255 NZ_NPLZ01000006.1 Protein Homology CDS 65062 66075 . + 0 ID=cds-WP_000193432.1;Parent=gene-CCO53_RS12275;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=CCO53_RS12275;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 66278 67186 . + . ID=gene-CCO53_RS12280;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CCO53_RS12280;old_locus_tag=CCO53_12260 NZ_NPLZ01000006.1 Protein Homology CDS 66278 67186 . + 0 ID=cds-WP_000729450.1;Parent=gene-CCO53_RS12280;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=CCO53_RS12280;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 67318 67731 . - . ID=gene-CCO53_RS12285;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=CCO53_RS12285;old_locus_tag=CCO53_12265 NZ_NPLZ01000006.1 Protein Homology CDS 67318 67731 . - 0 ID=cds-WP_001287383.1;Parent=gene-CCO53_RS12285;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=CCO53_RS12285;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 68394 69011 . + . ID=gene-CCO53_RS12290;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=CCO53_RS12290;old_locus_tag=CCO53_12270 NZ_NPLZ01000006.1 Protein Homology CDS 68394 69011 . + 0 ID=cds-WP_000068097.1;Parent=gene-CCO53_RS12290;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=CCO53_RS12290;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 69208 71886 . - . ID=gene-CCO53_RS12295;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=CCO53_RS12295;old_locus_tag=CCO53_12275 NZ_NPLZ01000006.1 Protein Homology CDS 69208 71886 . - 0 ID=cds-WP_000301678.1;Parent=gene-CCO53_RS12295;Dbxref=GenBank:WP_000301678.1;Name=WP_000301678.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=CCO53_RS12295;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301678.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 72363 73010 . + . ID=gene-CCO53_RS12300;Name=CCO53_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12300;old_locus_tag=CCO53_12280 NZ_NPLZ01000006.1 Protein Homology CDS 72363 73010 . + 0 ID=cds-WP_000615840.1;Parent=gene-CCO53_RS12300;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=CCO53_RS12300;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 73777 75408 . + . ID=gene-CCO53_RS12310;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=CCO53_RS12310;old_locus_tag=CCO53_12290 NZ_NPLZ01000006.1 Protein Homology CDS 73777 75408 . + 0 ID=cds-WP_001521098.1;Parent=gene-CCO53_RS12310;Dbxref=GenBank:WP_001521098.1;Name=WP_001521098.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=CCO53_RS12310;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001521098.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 75530 76450 . + . ID=gene-CCO53_RS12315;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=CCO53_RS12315;old_locus_tag=CCO53_12295 NZ_NPLZ01000006.1 Protein Homology CDS 75530 76450 . + 0 ID=cds-WP_000911097.1;Parent=gene-CCO53_RS12315;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=CCO53_RS12315;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 76465 77373 . + . ID=gene-CCO53_RS12320;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=CCO53_RS12320;old_locus_tag=CCO53_12300 NZ_NPLZ01000006.1 Protein Homology CDS 76465 77373 . + 0 ID=cds-WP_000979653.1;Parent=gene-CCO53_RS12320;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=CCO53_RS12320;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 77385 78392 . + . ID=gene-CCO53_RS12325;Name=CCO53_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12325;old_locus_tag=CCO53_12305 NZ_NPLZ01000006.1 Protein Homology CDS 77385 78392 . + 0 ID=cds-WP_000058857.1;Parent=gene-CCO53_RS12325;Dbxref=GenBank:WP_000058857.1;Name=WP_000058857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=CCO53_RS12325;product=ABC transporter ATP-binding protein;protein_id=WP_000058857.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 78389 79393 . + . ID=gene-CCO53_RS12330;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=CCO53_RS12330;old_locus_tag=CCO53_12310 NZ_NPLZ01000006.1 Protein Homology CDS 78389 79393 . + 0 ID=cds-WP_000994696.1;Parent=gene-CCO53_RS12330;Dbxref=GenBank:WP_000994696.1;Name=WP_000994696.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=CCO53_RS12330;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994696.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 79441 80277 . + . ID=gene-CCO53_RS12335;Name=CCO53_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12335;old_locus_tag=CCO53_12315 NZ_NPLZ01000006.1 Protein Homology CDS 79441 80277 . + 0 ID=cds-WP_000059074.1;Parent=gene-CCO53_RS12335;Dbxref=GenBank:WP_000059074.1;Name=WP_000059074.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=CCO53_RS12335;product=ion transporter;protein_id=WP_000059074.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 80325 80654 . - . ID=gene-CCO53_RS12340;Name=CCO53_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12340;old_locus_tag=CCO53_12320 NZ_NPLZ01000006.1 Protein Homology CDS 80325 80654 . - 0 ID=cds-WP_000425070.1;Parent=gene-CCO53_RS12340;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=CCO53_RS12340;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 80688 82148 . - . ID=gene-CCO53_RS12345;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CCO53_RS12345;old_locus_tag=CCO53_12325 NZ_NPLZ01000006.1 Protein Homology CDS 80688 82148 . - 0 ID=cds-WP_000206886.1;Parent=gene-CCO53_RS12345;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=CCO53_RS12345;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 82291 82464 . + . ID=gene-CCO53_RS12350;Name=CCO53_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12350;old_locus_tag=CCO53_12330 NZ_NPLZ01000006.1 Protein Homology CDS 82291 82464 . + 0 ID=cds-WP_001531561.1;Parent=gene-CCO53_RS12350;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=CCO53_RS12350;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 82508 82804 . - . ID=gene-CCO53_RS12355;Name=CCO53_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12355;old_locus_tag=CCO53_12335 NZ_NPLZ01000006.1 Protein Homology CDS 82508 82804 . - 0 ID=cds-WP_000967605.1;Parent=gene-CCO53_RS12355;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=CCO53_RS12355;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 83028 83756 . + . ID=gene-CCO53_RS12360;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=CCO53_RS12360;old_locus_tag=CCO53_12340 NZ_NPLZ01000006.1 Protein Homology CDS 83028 83756 . + 0 ID=cds-WP_001525247.1;Parent=gene-CCO53_RS12360;Dbxref=GenBank:WP_001525247.1;Name=WP_001525247.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=CCO53_RS12360;product=TonB system transport protein TonB;protein_id=WP_001525247.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 83816 84217 . - . ID=gene-CCO53_RS12365;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=CCO53_RS12365;old_locus_tag=CCO53_12345 NZ_NPLZ01000006.1 Protein Homology CDS 83816 84217 . - 0 ID=cds-WP_000210317.1;Parent=gene-CCO53_RS12365;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=CCO53_RS12365;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 84378 84917 . - . ID=gene-CCO53_RS12370;Name=CCO53_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12370;old_locus_tag=CCO53_12350 NZ_NPLZ01000006.1 Protein Homology CDS 84378 84917 . - 0 ID=cds-WP_000808682.1;Parent=gene-CCO53_RS12370;Dbxref=GenBank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=CCO53_RS12370;product=septation protein A;protein_id=WP_000808682.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 84974 85717 . - . ID=gene-CCO53_RS12375;Name=CCO53_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12375;old_locus_tag=CCO53_12355 NZ_NPLZ01000006.1 Protein Homology CDS 84974 85717 . - 0 ID=cds-WP_000028507.1;Parent=gene-CCO53_RS12375;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=CCO53_RS12375;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 85743 86147 . - . ID=gene-CCO53_RS12380;Name=CCO53_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12380;old_locus_tag=CCO53_12360 NZ_NPLZ01000006.1 Protein Homology CDS 85743 86147 . - 0 ID=cds-WP_076726667.1;Parent=gene-CCO53_RS12380;Dbxref=GenBank:WP_076726667.1;Name=WP_076726667.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=CCO53_RS12380;product=YkgJ family cysteine cluster protein;protein_id=WP_076726667.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 86483 87121 . + . ID=gene-CCO53_RS12385;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=CCO53_RS12385;old_locus_tag=CCO53_12365 NZ_NPLZ01000006.1 Protein Homology CDS 86483 87121 . + 0 ID=cds-WP_000714798.1;Parent=gene-CCO53_RS12385;Dbxref=GenBank:WP_000714798.1;Name=WP_000714798.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=CCO53_RS12385;product=outer membrane protein OmpW;protein_id=WP_000714798.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 87203 88081 . - . ID=gene-CCO53_RS12390;Name=CCO53_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12390;old_locus_tag=CCO53_12370 NZ_NPLZ01000006.1 Protein Homology CDS 87203 88081 . - 0 ID=cds-WP_000488354.1;Parent=gene-CCO53_RS12390;Dbxref=GenBank:WP_000488354.1;Name=WP_000488354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=CCO53_RS12390;product=manganese catalase family protein;protein_id=WP_000488354.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 88101 88607 . - . ID=gene-CCO53_RS12395;Name=CCO53_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12395;old_locus_tag=CCO53_12375 NZ_NPLZ01000006.1 Protein Homology CDS 88101 88607 . - 0 ID=cds-WP_001109977.1;Parent=gene-CCO53_RS12395;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=CCO53_RS12395;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 88681 89184 . - . ID=gene-CCO53_RS12400;Name=CCO53_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12400;old_locus_tag=CCO53_12380 NZ_NPLZ01000006.1 Protein Homology CDS 88681 89184 . - 0 ID=cds-WP_094887686.1;Parent=gene-CCO53_RS12400;Dbxref=GenBank:WP_094887686.1;Name=WP_094887686.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=CCO53_RS12400;product=ferritin-like domain-containing protein;protein_id=WP_094887686.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 89274 89456 . - . ID=gene-CCO53_RS12405;Name=CCO53_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12405;old_locus_tag=CCO53_12385 NZ_NPLZ01000006.1 Protein Homology CDS 89274 89456 . - 0 ID=cds-WP_000807657.1;Parent=gene-CCO53_RS12405;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=CCO53_RS12405;product=general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 89936 90742 . - . ID=gene-CCO53_RS12410;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CCO53_RS12410;old_locus_tag=CCO53_12390 NZ_NPLZ01000006.1 Protein Homology CDS 89936 90742 . - 0 ID=cds-WP_094887687.1;Parent=gene-CCO53_RS12410;Dbxref=GenBank:WP_094887687.1;Name=WP_094887687.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=CCO53_RS12410;product=tryptophan synthase subunit alpha;protein_id=WP_094887687.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 90742 91935 . - . ID=gene-CCO53_RS12415;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CCO53_RS12415;old_locus_tag=CCO53_12395 NZ_NPLZ01000006.1 Protein Homology CDS 90742 91935 . - 0 ID=cds-WP_000209485.1;Parent=gene-CCO53_RS12415;Dbxref=GenBank:WP_000209485.1;Name=WP_000209485.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=CCO53_RS12415;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 91945 93303 . - . ID=gene-CCO53_RS12420;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=CCO53_RS12420;old_locus_tag=CCO53_12400 NZ_NPLZ01000006.1 Protein Homology CDS 91945 93303 . - 0 ID=cds-WP_094887688.1;Parent=gene-CCO53_RS12420;Dbxref=GenBank:WP_094887688.1;Name=WP_094887688.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=CCO53_RS12420;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_094887688.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 93307 94902 . - . ID=gene-CCO53_RS12425;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CCO53_RS12425;old_locus_tag=CCO53_12405 NZ_NPLZ01000006.1 Protein Homology CDS 93307 94902 . - 0 ID=cds-WP_079821371.1;Parent=gene-CCO53_RS12425;Dbxref=GenBank:WP_079821371.1;Name=WP_079821371.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=CCO53_RS12425;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_079821371.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 94902 96464 . - . ID=gene-CCO53_RS12430;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=CCO53_RS12430;old_locus_tag=CCO53_12410 NZ_NPLZ01000006.1 Protein Homology CDS 94902 96464 . - 0 ID=cds-WP_023182229.1;Parent=gene-CCO53_RS12430;Dbxref=GenBank:WP_023182229.1;Name=WP_023182229.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=CCO53_RS12430;product=anthranilate synthase component I;protein_id=WP_023182229.1;transl_table=11 NZ_NPLZ01000006.1 cmsearch sequence_feature 96487 96582 . - . ID=id-NZ_NPLZ01000006.1:96487..96582;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPLZ01000006.1 RefSeq gene 96559 96603 . - . ID=gene-CCO53_RS12435;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=CCO53_RS12435;old_locus_tag=CCO53_12415 NZ_NPLZ01000006.1 Protein Homology CDS 96559 96603 . - 0 ID=cds-WP_010989026.1;Parent=gene-CCO53_RS12435;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=CCO53_RS12435;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 96725 97606 . + . ID=gene-CCO53_RS12440;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=CCO53_RS12440;old_locus_tag=CCO53_12420 NZ_NPLZ01000006.1 Protein Homology CDS 96725 97606 . + 0 ID=cds-WP_000500435.1;Parent=gene-CCO53_RS12440;Dbxref=GenBank:WP_000500435.1;Name=WP_000500435.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=CCO53_RS12440;product=RNase RNM;protein_id=WP_000500435.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 97614 98234 . + . ID=gene-CCO53_RS12445;Name=CCO53_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12445;old_locus_tag=CCO53_12425 NZ_NPLZ01000006.1 Protein Homology CDS 97614 98234 . + 0 ID=cds-WP_000077250.1;Parent=gene-CCO53_RS12445;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=CCO53_RS12445;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 98335 99210 . + . ID=gene-CCO53_RS12450;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=CCO53_RS12450;old_locus_tag=CCO53_12430 NZ_NPLZ01000006.1 Protein Homology CDS 98335 99210 . + 0 ID=cds-WP_001291233.1;Parent=gene-CCO53_RS12450;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=CCO53_RS12450;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 99297 99887 . - . ID=gene-CCO53_RS12455;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=CCO53_RS12455;old_locus_tag=CCO53_12435 NZ_NPLZ01000006.1 Protein Homology CDS 99297 99887 . - 0 ID=cds-WP_001278856.1;Parent=gene-CCO53_RS12455;Dbxref=GenBank:WP_001278856.1;Name=WP_001278856.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=CCO53_RS12455;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278856.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 99884 100645 . - . ID=gene-CCO53_RS12460;Name=CCO53_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12460;old_locus_tag=CCO53_12440 NZ_NPLZ01000006.1 Protein Homology CDS 99884 100645 . - 0 ID=cds-WP_000559310.1;Parent=gene-CCO53_RS12460;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=CCO53_RS12460;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 100883 101929 . + . ID=gene-CCO53_RS12465;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=CCO53_RS12465;old_locus_tag=CCO53_12445 NZ_NPLZ01000006.1 Protein Homology CDS 100883 101929 . + 0 ID=cds-WP_000422082.1;Parent=gene-CCO53_RS12465;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=CCO53_RS12465;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 101971 102222 . - . ID=gene-CCO53_RS12470;Name=CCO53_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12470;old_locus_tag=CCO53_12450 NZ_NPLZ01000006.1 Protein Homology CDS 101971 102222 . - 0 ID=cds-WP_000548616.1;Parent=gene-CCO53_RS12470;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=CCO53_RS12470;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 102625 105222 . + . ID=gene-CCO53_RS12480;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CCO53_RS12480;old_locus_tag=CCO53_12460 NZ_NPLZ01000006.1 Protein Homology CDS 102625 105222 . + 0 ID=cds-WP_000513593.1;Parent=gene-CCO53_RS12480;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=CCO53_RS12480;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 105633 106607 . + . ID=gene-CCO53_RS12490;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=CCO53_RS12490;old_locus_tag=CCO53_12470 NZ_NPLZ01000006.1 Protein Homology CDS 105633 106607 . + 0 ID=cds-WP_000776233.1;Parent=gene-CCO53_RS12490;Dbxref=GenBank:WP_000776233.1;Name=WP_000776233.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=CCO53_RS12490;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776233.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 106888 107028 . + . ID=gene-CCO53_RS12495;Name=CCO53_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12495;old_locus_tag=CCO53_12475 NZ_NPLZ01000006.1 Protein Homology CDS 106888 107028 . + 0 ID=cds-WP_213083417.1;Parent=gene-CCO53_RS12495;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=CCO53_RS12495;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 107309 107401 . + . ID=gene-CCO53_RS24020;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=CCO53_RS24020 NZ_NPLZ01000006.1 Protein Homology CDS 107309 107401 . + 0 ID=cds-WP_223148964.1;Parent=gene-CCO53_RS24020;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=CCO53_RS24020;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 107584 110259 . + . ID=gene-CCO53_RS12510;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CCO53_RS12510;old_locus_tag=CCO53_12490 NZ_NPLZ01000006.1 Protein Homology CDS 107584 110259 . + 0 ID=cds-WP_094887689.1;Parent=gene-CCO53_RS12510;Dbxref=GenBank:WP_094887689.1;Name=WP_094887689.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=CCO53_RS12510;product=aconitate hydratase AcnA;protein_id=WP_094887689.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 110315 110905 . - . ID=gene-CCO53_RS12515;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=CCO53_RS12515;old_locus_tag=CCO53_12495 NZ_NPLZ01000006.1 Protein Homology CDS 110315 110905 . - 0 ID=cds-WP_001176284.1;Parent=gene-CCO53_RS12515;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=CCO53_RS12515;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 111101 111865 . + . ID=gene-CCO53_RS12520;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=CCO53_RS12520;old_locus_tag=CCO53_12500 NZ_NPLZ01000006.1 Protein Homology CDS 111101 111865 . + 0 ID=cds-WP_000948651.1;Parent=gene-CCO53_RS12520;Dbxref=GenBank:WP_000948651.1;Name=WP_000948651.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=CCO53_RS12520;product=phosphatidylglycerophosphatase B;protein_id=WP_000948651.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 112015 112323 . + . ID=gene-CCO53_RS12530;Name=CCO53_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12530;old_locus_tag=CCO53_12510 NZ_NPLZ01000006.1 Protein Homology CDS 112015 112323 . + 0 ID=cds-WP_000876301.1;Parent=gene-CCO53_RS12530;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=CCO53_RS12530;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 112330 113499 . + . ID=gene-CCO53_RS12535;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=CCO53_RS12535;old_locus_tag=CCO53_12515 NZ_NPLZ01000006.1 Protein Homology CDS 112330 113499 . + 0 ID=cds-WP_000891378.1;Parent=gene-CCO53_RS12535;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=CCO53_RS12535;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 113690 114427 . + . ID=gene-CCO53_RS12540;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CCO53_RS12540;old_locus_tag=CCO53_12520 NZ_NPLZ01000006.1 Protein Homology CDS 113690 114427 . + 0 ID=cds-WP_001675160.1;Parent=gene-CCO53_RS12540;Dbxref=GenBank:WP_001675160.1;Name=WP_001675160.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=CCO53_RS12540;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_001675160.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 114427 114753 . + . ID=gene-CCO53_RS12545;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=CCO53_RS12545;old_locus_tag=CCO53_12525 NZ_NPLZ01000006.1 Protein Homology CDS 114427 114753 . + 0 ID=cds-WP_001285199.1;Parent=gene-CCO53_RS12545;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=CCO53_RS12545;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 114873 115091 . - . ID=gene-CCO53_RS12550;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=CCO53_RS12550;old_locus_tag=CCO53_12530 NZ_NPLZ01000006.1 Protein Homology CDS 114873 115091 . - 0 ID=cds-WP_061372242.1;Parent=gene-CCO53_RS12550;Dbxref=GenBank:WP_061372242.1;Name=WP_061372242.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=CCO53_RS12550;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_061372242.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 115350 116102 . - . ID=gene-CCO53_RS12555;Name=CCO53_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12555;old_locus_tag=CCO53_12535 NZ_NPLZ01000006.1 Protein Homology CDS 115350 116102 . - 0 ID=cds-WP_001088594.1;Parent=gene-CCO53_RS12555;Dbxref=GenBank:WP_001088594.1;Name=WP_001088594.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=CCO53_RS12555;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088594.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 116189 116368 . - . ID=gene-CCO53_RS12560;Name=CCO53_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12560;old_locus_tag=CCO53_12540 NZ_NPLZ01000006.1 Protein Homology CDS 116189 116368 . - 0 ID=cds-WP_076735109.1;Parent=gene-CCO53_RS12560;Dbxref=GenBank:WP_076735109.1;Name=WP_076735109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=CCO53_RS12560;product=hypothetical protein;protein_id=WP_076735109.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 116490 118472 . - . ID=gene-CCO53_RS12565;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=CCO53_RS12565;old_locus_tag=CCO53_12545 NZ_NPLZ01000006.1 Protein Homology CDS 116490 118472 . - 0 ID=cds-WP_024146146.1;Parent=gene-CCO53_RS12565;Dbxref=GenBank:WP_024146146.1;Name=WP_024146146.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=CCO53_RS12565;product=cyclic di-GMP phosphodiesterase;protein_id=WP_024146146.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 118734 120668 . - . ID=gene-CCO53_RS12575;Name=CCO53_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12575;old_locus_tag=CCO53_12555 NZ_NPLZ01000006.1 Protein Homology CDS 118734 120668 . - 0 ID=cds-WP_000485041.1;Parent=gene-CCO53_RS12575;Dbxref=GenBank:WP_000485041.1;Name=WP_000485041.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=CCO53_RS12575;product=exoribonuclease II;protein_id=WP_000485041.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq pseudogene 120913 121890 . - . ID=gene-CCO53_RS12580;Name=CCO53_RS12580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS12580;old_locus_tag=CCO53_12560;partial=true;pseudo=true;start_range=.,120913 NZ_NPLZ01000006.1 Protein Homology CDS 120913 121890 . - 0 ID=cds-CCO53_RS12580;Parent=gene-CCO53_RS12580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=CCO53_RS12580;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,120913;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 122090 122878 . - . ID=gene-CCO53_RS12585;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CCO53_RS12585;old_locus_tag=CCO53_12565 NZ_NPLZ01000006.1 Protein Homology CDS 122090 122878 . - 0 ID=cds-WP_000506501.1;Parent=gene-CCO53_RS12585;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=CCO53_RS12585;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 122996 123289 . - . ID=gene-CCO53_RS12590;Name=CCO53_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12590;old_locus_tag=CCO53_12570 NZ_NPLZ01000006.1 Protein Homology CDS 122996 123289 . - 0 ID=cds-WP_058331450.1;Parent=gene-CCO53_RS12590;Dbxref=GenBank:WP_058331450.1;Name=WP_058331450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=CCO53_RS12590;product=hypothetical protein;protein_id=WP_058331450.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 123270 123449 . - . ID=gene-CCO53_RS12595;Name=CCO53_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12595;old_locus_tag=CCO53_12575 NZ_NPLZ01000006.1 Protein Homology CDS 123270 123449 . - 0 ID=cds-WP_058331547.1;Parent=gene-CCO53_RS12595;Dbxref=GenBank:WP_058331547.1;Name=WP_058331547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=CCO53_RS12595;product=hypothetical protein;protein_id=WP_058331547.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 123483 124856 . + . ID=gene-CCO53_RS12600;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=CCO53_RS12600;old_locus_tag=CCO53_12580 NZ_NPLZ01000006.1 Protein Homology CDS 123483 124856 . + 0 ID=cds-WP_094887690.1;Parent=gene-CCO53_RS12600;Dbxref=GenBank:WP_094887690.1;Name=WP_094887690.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=CCO53_RS12600;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_094887690.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 125323 126030 . + . ID=gene-CCO53_RS12605;Name=CCO53_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12605;old_locus_tag=CCO53_12585 NZ_NPLZ01000006.1 Protein Homology CDS 125323 126030 . + 0 ID=cds-WP_058331451.1;Parent=gene-CCO53_RS12605;Dbxref=GenBank:WP_058331451.1;Name=WP_058331451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=CCO53_RS12605;product=EAL domain-containing protein;protein_id=WP_058331451.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 126046 126852 . - . ID=gene-CCO53_RS12610;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=CCO53_RS12610;old_locus_tag=CCO53_12590 NZ_NPLZ01000006.1 Protein Homology CDS 126046 126852 . - 0 ID=cds-WP_000230462.1;Parent=gene-CCO53_RS12610;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=CCO53_RS12610;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 126854 127846 . - . ID=gene-CCO53_RS12615;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=CCO53_RS12615;old_locus_tag=CCO53_12595 NZ_NPLZ01000006.1 Protein Homology CDS 126854 127846 . - 0 ID=cds-WP_001128869.1;Parent=gene-CCO53_RS12615;Dbxref=GenBank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=CCO53_RS12615;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 127846 128736 . - . ID=gene-CCO53_RS12620;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=CCO53_RS12620;old_locus_tag=CCO53_12600 NZ_NPLZ01000006.1 Protein Homology CDS 127846 128736 . - 0 ID=cds-WP_094887691.1;Parent=gene-CCO53_RS12620;Dbxref=GenBank:WP_094887691.1;Name=WP_094887691.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=CCO53_RS12620;product=peptide ABC transporter permease SapC;protein_id=WP_094887691.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 128723 129688 . - . ID=gene-CCO53_RS12625;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=CCO53_RS12625;old_locus_tag=CCO53_12605 NZ_NPLZ01000006.1 Protein Homology CDS 128723 129688 . - 0 ID=cds-WP_094887692.1;Parent=gene-CCO53_RS12625;Dbxref=GenBank:WP_094887692.1;Name=WP_094887692.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=CCO53_RS12625;product=peptide ABC transporter permease SapB;protein_id=WP_094887692.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 129685 131334 . - . ID=gene-CCO53_RS12630;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=CCO53_RS12630;old_locus_tag=CCO53_12610 NZ_NPLZ01000006.1 Protein Homology CDS 129685 131334 . - 0 ID=cds-WP_001241629.1;Parent=gene-CCO53_RS12630;Dbxref=GenBank:WP_001241629.1;Name=WP_001241629.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=CCO53_RS12630;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241629.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 131446 132426 . - . ID=gene-CCO53_RS12635;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=CCO53_RS12635;old_locus_tag=CCO53_12615 NZ_NPLZ01000006.1 Protein Homology CDS 131446 132426 . - 0 ID=cds-WP_000807306.1;Parent=gene-CCO53_RS12635;Dbxref=GenBank:WP_000807306.1;Name=WP_000807306.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=CCO53_RS12635;product=phage shock protein operon transcriptional activator;protein_id=WP_000807306.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 132597 133265 . + . ID=gene-CCO53_RS12640;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=CCO53_RS12640;old_locus_tag=CCO53_12620 NZ_NPLZ01000006.1 Protein Homology CDS 132597 133265 . + 0 ID=cds-WP_000510996.1;Parent=gene-CCO53_RS12640;Dbxref=GenBank:WP_000510996.1;Name=WP_000510996.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=CCO53_RS12640;product=phage shock protein PspA;protein_id=WP_000510996.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 133325 133549 . + . ID=gene-CCO53_RS12645;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=CCO53_RS12645;old_locus_tag=CCO53_12625 NZ_NPLZ01000006.1 Protein Homology CDS 133325 133549 . + 0 ID=cds-WP_001274953.1;Parent=gene-CCO53_RS12645;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=CCO53_RS12645;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 133549 133908 . + . ID=gene-CCO53_RS12650;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=CCO53_RS12650;old_locus_tag=CCO53_12630 NZ_NPLZ01000006.1 Protein Homology CDS 133549 133908 . + 0 ID=cds-WP_023202035.1;Parent=gene-CCO53_RS12650;Dbxref=GenBank:WP_023202035.1;Name=WP_023202035.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=CCO53_RS12650;product=envelope stress response membrane protein PspC;protein_id=WP_023202035.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 133931 134149 . + . ID=gene-CCO53_RS12655;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=CCO53_RS12655;old_locus_tag=CCO53_12635 NZ_NPLZ01000006.1 Protein Homology CDS 133931 134149 . + 0 ID=cds-WP_001097607.1;Parent=gene-CCO53_RS12655;Dbxref=GenBank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=CCO53_RS12655;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 134225 134539 . + . ID=gene-CCO53_RS12660;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=CCO53_RS12660;old_locus_tag=CCO53_12640 NZ_NPLZ01000006.1 Protein Homology CDS 134225 134539 . + 0 ID=cds-WP_000913428.1;Parent=gene-CCO53_RS12660;Dbxref=GenBank:WP_000913428.1;Name=WP_000913428.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=CCO53_RS12660;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913428.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 134688 136085 . + . ID=gene-CCO53_RS12665;Name=CCO53_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12665;old_locus_tag=CCO53_12645 NZ_NPLZ01000006.1 Protein Homology CDS 134688 136085 . + 0 ID=cds-WP_000825860.1;Parent=gene-CCO53_RS12665;Dbxref=GenBank:WP_000825860.1;Name=WP_000825860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=CCO53_RS12665;product=YcjX family protein;protein_id=WP_000825860.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 136082 137143 . + . ID=gene-CCO53_RS12670;Name=CCO53_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12670;old_locus_tag=CCO53_12650 NZ_NPLZ01000006.1 Protein Homology CDS 136082 137143 . + 0 ID=cds-WP_001294463.1;Parent=gene-CCO53_RS12670;Dbxref=GenBank:WP_001294463.1;Name=WP_001294463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=CCO53_RS12670;product=YcjF family protein;protein_id=WP_001294463.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 137291 138832 . + . ID=gene-CCO53_RS12675;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=CCO53_RS12675;old_locus_tag=CCO53_12655 NZ_NPLZ01000006.1 Protein Homology CDS 137291 138832 . + 0 ID=cds-WP_094887693.1;Parent=gene-CCO53_RS12675;Dbxref=GenBank:WP_094887693.1;Name=WP_094887693.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=CCO53_RS12675;product=transcriptional regulator TyrR;protein_id=WP_094887693.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 138922 139428 . - . ID=gene-CCO53_RS12680;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CCO53_RS12680;old_locus_tag=CCO53_12660 NZ_NPLZ01000006.1 Protein Homology CDS 138922 139428 . - 0 ID=cds-WP_000084401.1;Parent=gene-CCO53_RS12680;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=CCO53_RS12680;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 139544 140509 . + . ID=gene-CCO53_RS12685;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=CCO53_RS12685;old_locus_tag=CCO53_12665 NZ_NPLZ01000006.1 Protein Homology CDS 139544 140509 . + 0 ID=cds-WP_001258068.1;Parent=gene-CCO53_RS12685;Dbxref=GenBank:WP_001258068.1;Name=WP_001258068.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=CCO53_RS12685;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258068.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 140484 141212 . - . ID=gene-CCO53_RS12690;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=CCO53_RS12690;old_locus_tag=CCO53_12670 NZ_NPLZ01000006.1 Protein Homology CDS 140484 141212 . - 0 ID=cds-WP_000219107.1;Parent=gene-CCO53_RS12690;Dbxref=GenBank:WP_000219107.1;Name=WP_000219107.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=CCO53_RS12690;product=murein tripeptide amidase MpaA;protein_id=WP_000219107.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 141402 143015 . + . ID=gene-CCO53_RS12695;Name=CCO53_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12695;old_locus_tag=CCO53_12675 NZ_NPLZ01000006.1 Protein Homology CDS 141402 143015 . + 0 ID=cds-WP_001216553.1;Parent=gene-CCO53_RS12695;Dbxref=GenBank:WP_001216553.1;Name=WP_001216553.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=CCO53_RS12695;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216553.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 143112 144041 . - . ID=gene-CCO53_RS12700;Name=CCO53_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12700;old_locus_tag=CCO53_12680 NZ_NPLZ01000006.1 Protein Homology CDS 143112 144041 . - 0 ID=cds-WP_023202504.1;Parent=gene-CCO53_RS12700;Dbxref=GenBank:WP_023202504.1;Name=WP_023202504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=CCO53_RS12700;product=aromatic alcohol reductase;protein_id=WP_023202504.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 144160 145065 . + . ID=gene-CCO53_RS12705;Name=CCO53_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12705;old_locus_tag=CCO53_12685 NZ_NPLZ01000006.1 Protein Homology CDS 144160 145065 . + 0 ID=cds-WP_094887694.1;Parent=gene-CCO53_RS12705;Dbxref=GenBank:WP_094887694.1;Name=WP_094887694.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=CCO53_RS12705;product=LysR family transcriptional regulator;protein_id=WP_094887694.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 145341 146210 . + . ID=gene-CCO53_RS12710;Name=CCO53_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12710;old_locus_tag=CCO53_12690 NZ_NPLZ01000006.1 Protein Homology CDS 145341 146210 . + 0 ID=cds-WP_000456775.1;Parent=gene-CCO53_RS12710;Dbxref=GenBank:WP_000456775.1;Name=WP_000456775.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=CCO53_RS12710;product=aldo/keto reductase;protein_id=WP_000456775.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 146301 147014 . - . ID=gene-CCO53_RS12715;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=CCO53_RS12715;old_locus_tag=CCO53_12695 NZ_NPLZ01000006.1 Protein Homology CDS 146301 147014 . - 0 ID=cds-WP_031605281.1;Parent=gene-CCO53_RS12715;Dbxref=GenBank:WP_031605281.1;Name=WP_031605281.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=CCO53_RS12715;product=SDR family oxidoreductase;protein_id=WP_031605281.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 147092 147682 . + . ID=gene-CCO53_RS12720;Name=CCO53_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12720;old_locus_tag=CCO53_12700 NZ_NPLZ01000006.1 Protein Homology CDS 147092 147682 . + 0 ID=cds-WP_000208474.1;Parent=gene-CCO53_RS12720;Dbxref=GenBank:WP_000208474.1;Name=WP_000208474.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=CCO53_RS12720;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208474.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 147811 148047 . + . ID=gene-CCO53_RS12725;Name=CCO53_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12725;old_locus_tag=CCO53_12705 NZ_NPLZ01000006.1 Protein Homology CDS 147811 148047 . + 0 ID=cds-WP_001168017.1;Parent=gene-CCO53_RS12725;Dbxref=GenBank:WP_001168017.1;Name=WP_001168017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=CCO53_RS12725;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168017.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 148261 149370 . - . ID=gene-CCO53_RS12730;Name=CCO53_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12730;old_locus_tag=CCO53_12710 NZ_NPLZ01000006.1 Protein Homology CDS 148261 149370 . - 0 ID=cds-WP_094887695.1;Parent=gene-CCO53_RS12730;Dbxref=GenBank:WP_094887695.1;Name=WP_094887695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=CCO53_RS12730;product=hypothetical protein;protein_id=WP_094887695.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 149762 150619 . - . ID=gene-CCO53_RS12735;Name=CCO53_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12735;old_locus_tag=CCO53_12715 NZ_NPLZ01000006.1 Protein Homology CDS 149762 150619 . - 0 ID=cds-WP_078057665.1;Parent=gene-CCO53_RS12735;Dbxref=GenBank:WP_078057665.1;Name=WP_078057665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=CCO53_RS12735;product=GyrI-like domain-containing protein;protein_id=WP_078057665.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 150912 151757 . + . ID=gene-CCO53_RS12740;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=CCO53_RS12740;old_locus_tag=CCO53_12720 NZ_NPLZ01000006.1 Protein Homology CDS 150912 151757 . + 0 ID=cds-WP_058331459.1;Parent=gene-CCO53_RS12740;Dbxref=GenBank:WP_058331459.1;Name=WP_058331459.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=CCO53_RS12740;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_058331459.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 151832 153814 . + . ID=gene-CCO53_RS12745;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=CCO53_RS12745;old_locus_tag=CCO53_12725 NZ_NPLZ01000006.1 Protein Homology CDS 151832 153814 . + 0 ID=cds-WP_094887696.1;Parent=gene-CCO53_RS12745;Dbxref=GenBank:WP_094887696.1;Name=WP_094887696.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=CCO53_RS12745;product=two-partner secretion translocator ZirT;protein_id=WP_094887696.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 153841 154668 . + . ID=gene-CCO53_RS12750;Name=CCO53_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12750;old_locus_tag=CCO53_12730 NZ_NPLZ01000006.1 Protein Homology CDS 153841 154668 . + 0 ID=cds-WP_094887697.1;Parent=gene-CCO53_RS12750;Dbxref=GenBank:WP_094887697.1;Name=WP_094887697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666973.1;locus_tag=CCO53_RS12750;product=ZirS family two-partner secretion-like system exoprotein;protein_id=WP_094887697.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 154764 155321 . + . ID=gene-CCO53_RS12755;Name=CCO53_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12755;old_locus_tag=CCO53_12735 NZ_NPLZ01000006.1 Protein Homology CDS 154764 155321 . + 0 ID=cds-WP_076726641.1;Parent=gene-CCO53_RS12755;Dbxref=GenBank:WP_076726641.1;Name=WP_076726641.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=CCO53_RS12755;product=thiol peroxidase;protein_id=WP_076726641.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 155425 155763 . - . ID=gene-CCO53_RS12760;Name=CCO53_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12760;old_locus_tag=CCO53_12740 NZ_NPLZ01000006.1 Protein Homology CDS 155425 155763 . - 0 ID=cds-WP_023228350.1;Parent=gene-CCO53_RS12760;Dbxref=GenBank:WP_023228350.1;Name=WP_023228350.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=CCO53_RS12760;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_023228350.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 155791 156477 . - . ID=gene-CCO53_RS12765;Name=CCO53_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12765;old_locus_tag=CCO53_12745 NZ_NPLZ01000006.1 Protein Homology CDS 155791 156477 . - 0 ID=cds-WP_058331463.1;Parent=gene-CCO53_RS12765;Dbxref=GenBank:WP_058331463.1;Name=WP_058331463.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=CCO53_RS12765;product=B3/B4 domain-containing protein;protein_id=WP_058331463.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 156521 157123 . + . ID=gene-CCO53_RS12770;Name=CCO53_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12770;old_locus_tag=CCO53_12750 NZ_NPLZ01000006.1 Protein Homology CDS 156521 157123 . + 0 ID=cds-WP_094887698.1;Parent=gene-CCO53_RS12770;Dbxref=GenBank:WP_094887698.1;Name=WP_094887698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=CCO53_RS12770;product=helix-turn-helix domain-containing protein;protein_id=WP_094887698.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 157209 158240 . - . ID=gene-CCO53_RS12775;Name=CCO53_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12775;old_locus_tag=CCO53_12755 NZ_NPLZ01000006.1 Protein Homology CDS 157209 158240 . - 0 ID=cds-WP_063809277.1;Parent=gene-CCO53_RS12775;Dbxref=GenBank:WP_063809277.1;Name=WP_063809277.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=CCO53_RS12775;product=mechanosensitive ion channel family protein;protein_id=WP_063809277.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 158479 158733 . + . ID=gene-CCO53_RS12780;Name=CCO53_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12780;old_locus_tag=CCO53_12760 NZ_NPLZ01000006.1 Protein Homology CDS 158479 158733 . + 0 ID=cds-WP_000605645.1;Parent=gene-CCO53_RS12780;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=CCO53_RS12780;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 158788 159735 . - . ID=gene-CCO53_RS12785;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=CCO53_RS12785;old_locus_tag=CCO53_12765 NZ_NPLZ01000006.1 Protein Homology CDS 158788 159735 . - 0 ID=cds-WP_001262138.1;Parent=gene-CCO53_RS12785;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=CCO53_RS12785;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 159886 160638 . - . ID=gene-CCO53_RS12790;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=CCO53_RS12790;old_locus_tag=CCO53_12770 NZ_NPLZ01000006.1 Protein Homology CDS 159886 160638 . - 0 ID=cds-WP_000611914.1;Parent=gene-CCO53_RS12790;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=CCO53_RS12790;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 160834 161349 . - . ID=gene-CCO53_RS12795;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=CCO53_RS12795;old_locus_tag=CCO53_12775 NZ_NPLZ01000006.1 Protein Homology CDS 160834 161349 . - 0 ID=cds-WP_000945036.1;Parent=gene-CCO53_RS12795;Dbxref=GenBank:WP_000945036.1;Name=WP_000945036.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=CCO53_RS12795;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945036.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 161607 162170 . + . ID=gene-CCO53_RS12800;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=CCO53_RS12800;old_locus_tag=CCO53_12780 NZ_NPLZ01000006.1 Protein Homology CDS 161607 162170 . + 0 ID=cds-WP_001046799.1;Parent=gene-CCO53_RS12800;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=CCO53_RS12800;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 162502 163656 . + . ID=gene-CCO53_RS12805;Name=CCO53_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12805;old_locus_tag=CCO53_12785 NZ_NPLZ01000006.1 Protein Homology CDS 162502 163656 . + 0 ID=cds-WP_061372232.1;Parent=gene-CCO53_RS12805;Dbxref=GenBank:WP_061372232.1;Name=WP_061372232.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=CCO53_RS12805;product=methyl-accepting chemotaxis protein;protein_id=WP_061372232.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 163802 164785 . + . ID=gene-CCO53_RS12810;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=CCO53_RS12810;old_locus_tag=CCO53_12790 NZ_NPLZ01000006.1 Protein Homology CDS 163802 164785 . + 0 ID=cds-WP_000387373.1;Parent=gene-CCO53_RS12810;Dbxref=GenBank:WP_000387373.1;Name=WP_000387373.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=CCO53_RS12810;product=zinc transporter ZntB;protein_id=WP_000387373.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 165061 165243 . + . ID=gene-CCO53_RS24375;Name=CCO53_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24375;old_locus_tag=CCO53_12795 NZ_NPLZ01000006.1 Protein Homology CDS 165061 165243 . + 0 ID=cds-WP_001670836.1;Parent=gene-CCO53_RS24375;Dbxref=GenBank:WP_001670836.1;Name=WP_001670836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=CCO53_RS24375;product=hypothetical protein;protein_id=WP_001670836.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 165272 166645 . + . ID=gene-CCO53_RS12820;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=CCO53_RS12820;old_locus_tag=CCO53_12800 NZ_NPLZ01000006.1 Protein Homology CDS 165272 166645 . + 0 ID=cds-WP_000123688.1;Parent=gene-CCO53_RS12820;Dbxref=GenBank:WP_000123688.1;Name=WP_000123688.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=CCO53_RS12820;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123688.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 166689 167624 . - . ID=gene-CCO53_RS12825;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=CCO53_RS12825;old_locus_tag=CCO53_12805 NZ_NPLZ01000006.1 Protein Homology CDS 166689 167624 . - 0 ID=cds-WP_076726631.1;Parent=gene-CCO53_RS12825;Dbxref=GenBank:WP_076726631.1;Name=WP_076726631.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=CCO53_RS12825;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_076726631.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq pseudogene 167730 167882 . - . ID=gene-CCO53_RS12830;Name=CCO53_RS12830;end_range=167882,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS12830;old_locus_tag=CCO53_12810;partial=true;pseudo=true NZ_NPLZ01000006.1 Protein Homology CDS 167730 167882 . - 0 ID=cds-CCO53_RS12830;Parent=gene-CCO53_RS12830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=167882,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=CCO53_RS12830;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 168312 171734 . + . ID=gene-CCO53_RS12835;Name=CCO53_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12835;old_locus_tag=CCO53_12815 NZ_NPLZ01000006.1 Protein Homology CDS 168312 171734 . + 0 ID=cds-WP_094887699.1;Parent=gene-CCO53_RS12835;Dbxref=GenBank:WP_094887699.1;Name=WP_094887699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=CCO53_RS12835;product=DUF4765 family protein;protein_id=WP_094887699.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 172066 172404 . + . ID=gene-CCO53_RS12845;Name=CCO53_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12845;old_locus_tag=CCO53_12825 NZ_NPLZ01000006.1 Protein Homology CDS 172066 172404 . + 0 ID=cds-WP_000159237.1;Parent=gene-CCO53_RS12845;Dbxref=GenBank:WP_000159237.1;Name=WP_000159237.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=CCO53_RS12845;product=SMR family transporter;protein_id=WP_000159237.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 172457 172891 . - . ID=gene-CCO53_RS12850;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=CCO53_RS12850;old_locus_tag=CCO53_12830 NZ_NPLZ01000006.1 Protein Homology CDS 172457 172891 . - 0 ID=cds-WP_001082296.1;Parent=gene-CCO53_RS12850;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=CCO53_RS12850;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 173373 176897 . - . ID=gene-CCO53_RS12860;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=CCO53_RS12860;old_locus_tag=CCO53_12840 NZ_NPLZ01000006.1 Protein Homology CDS 173373 176897 . - 0 ID=cds-WP_080160233.1;Parent=gene-CCO53_RS12860;Dbxref=GenBank:WP_080160233.1;Name=WP_080160233.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=CCO53_RS12860;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_080160233.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 176958 177269 . - . ID=gene-CCO53_RS12865;Name=CCO53_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12865;old_locus_tag=CCO53_12845 NZ_NPLZ01000006.1 Protein Homology CDS 176958 177269 . - 0 ID=cds-WP_031607896.1;Parent=gene-CCO53_RS12865;Dbxref=GenBank:WP_031607896.1;Name=WP_031607896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=CCO53_RS12865;product=hypothetical protein;protein_id=WP_031607896.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 177173 177439 . + . ID=gene-CCO53_RS12870;Name=CCO53_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12870;old_locus_tag=CCO53_12850 NZ_NPLZ01000006.1 Protein Homology CDS 177173 177439 . + 0 ID=cds-WP_001200679.1;Parent=gene-CCO53_RS12870;Dbxref=GenBank:WP_001200679.1;Name=WP_001200679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=CCO53_RS12870;product=putative hemolysin;protein_id=WP_001200679.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 177483 177893 . - . ID=gene-CCO53_RS12875;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=CCO53_RS12875;old_locus_tag=CCO53_12855 NZ_NPLZ01000006.1 Protein Homology CDS 177483 177893 . - 0 ID=cds-WP_000725242.1;Parent=gene-CCO53_RS12875;Dbxref=GenBank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=CCO53_RS12875;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 178004 178993 . - . ID=gene-CCO53_RS12880;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=CCO53_RS12880;old_locus_tag=CCO53_12860 NZ_NPLZ01000006.1 Protein Homology CDS 178004 178993 . - 0 ID=cds-WP_000762206.1;Parent=gene-CCO53_RS12880;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=CCO53_RS12880;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 179233 181869 . + . ID=gene-CCO53_RS12885;Name=CCO53_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12885;old_locus_tag=CCO53_12865 NZ_NPLZ01000006.1 Protein Homology CDS 179233 181869 . + 0 ID=cds-WP_023224037.1;Parent=gene-CCO53_RS12885;Dbxref=GenBank:WP_023224037.1;Name=WP_023224037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=CCO53_RS12885;product=YdbH family protein;protein_id=WP_023224037.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 181869 182060 . + . ID=gene-CCO53_RS12890;Name=CCO53_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12890;old_locus_tag=CCO53_12870 NZ_NPLZ01000006.1 Protein Homology CDS 181869 182060 . + 0 ID=cds-WP_000784063.1;Parent=gene-CCO53_RS12890;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=CCO53_RS12890;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 182068 182391 . + . ID=gene-CCO53_RS12895;Name=CCO53_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12895;old_locus_tag=CCO53_12875 NZ_NPLZ01000006.1 Protein Homology CDS 182068 182391 . + 0 ID=cds-WP_000760414.1;Parent=gene-CCO53_RS12895;Dbxref=GenBank:WP_000760414.1;Name=WP_000760414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=CCO53_RS12895;product=YdbL family protein;protein_id=WP_000760414.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 182537 183133 . + . ID=gene-CCO53_RS12900;Name=CCO53_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12900;old_locus_tag=CCO53_12880 NZ_NPLZ01000006.1 Protein Homology CDS 182537 183133 . + 0 ID=cds-WP_094887700.1;Parent=gene-CCO53_RS12900;Dbxref=GenBank:WP_094887700.1;Name=WP_094887700.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000177492.1;locus_tag=CCO53_RS12900;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_094887700.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 183130 184047 . + . ID=gene-CCO53_RS12905;Name=CCO53_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12905;old_locus_tag=CCO53_12885 NZ_NPLZ01000006.1 Protein Homology CDS 183130 184047 . + 0 ID=cds-WP_080160231.1;Parent=gene-CCO53_RS12905;Dbxref=GenBank:WP_080160231.1;Name=WP_080160231.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156609.1;locus_tag=CCO53_RS12905;product=phosphatidate cytidylyltransferase;protein_id=WP_080160231.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 184054 184710 . + . ID=gene-CCO53_RS12910;Name=CCO53_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12910;old_locus_tag=CCO53_12890 NZ_NPLZ01000006.1 Protein Homology CDS 184054 184710 . + 0 ID=cds-WP_080160230.1;Parent=gene-CCO53_RS12910;Dbxref=GenBank:WP_080160230.1;Name=WP_080160230.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015702890.1;locus_tag=CCO53_RS12910;product=lysophospholipid acyltransferase family protein;protein_id=WP_080160230.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 184685 186445 . + . ID=gene-CCO53_RS12915;Name=CCO53_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12915;old_locus_tag=CCO53_12895 NZ_NPLZ01000006.1 Protein Homology CDS 184685 186445 . + 0 ID=cds-WP_080160229.1;Parent=gene-CCO53_RS12915;Dbxref=GenBank:WP_080160229.1;Name=WP_080160229.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008812691.1;locus_tag=CCO53_RS12915;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_080160229.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 186435 187745 . + . ID=gene-CCO53_RS12920;Name=CCO53_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12920;old_locus_tag=CCO53_12900 NZ_NPLZ01000006.1 Protein Homology CDS 186435 187745 . + 0 ID=cds-WP_080160228.1;Parent=gene-CCO53_RS12920;Dbxref=GenBank:WP_080160228.1;Name=WP_080160228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835230.1;locus_tag=CCO53_RS12920;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_080160228.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 187853 188140 . + . ID=gene-CCO53_RS12925;Name=CCO53_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12925;old_locus_tag=CCO53_12905 NZ_NPLZ01000006.1 Protein Homology CDS 187853 188140 . + 0 ID=cds-WP_077916080.1;Parent=gene-CCO53_RS12925;Dbxref=GenBank:WP_077916080.1;Name=WP_077916080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835231.1;locus_tag=CCO53_RS12925;product=hypothetical protein;protein_id=WP_077916080.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 188199 188804 . - . ID=gene-CCO53_RS12930;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=CCO53_RS12930;old_locus_tag=CCO53_12910 NZ_NPLZ01000006.1 Protein Homology CDS 188199 188804 . - 0 ID=cds-WP_000048924.1;Parent=gene-CCO53_RS12930;Dbxref=GenBank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=CCO53_RS12930;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 189005 192907 . + . ID=gene-CCO53_RS12935;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=CCO53_RS12935;old_locus_tag=CCO53_12915 NZ_NPLZ01000006.1 Protein Homology CDS 189005 192907 . + 0 ID=cds-WP_094887714.1;Parent=gene-CCO53_RS12935;Dbxref=GenBank:WP_094887714.1;Name=WP_094887714.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=CCO53_RS12935;product=ATP-dependent RNA helicase HrpA;protein_id=WP_094887714.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 192971 193771 . + . ID=gene-CCO53_RS12940;Name=CCO53_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12940;old_locus_tag=CCO53_12920 NZ_NPLZ01000006.1 Protein Homology CDS 192971 193771 . + 0 ID=cds-WP_021294428.1;Parent=gene-CCO53_RS12940;Dbxref=GenBank:WP_021294428.1;Name=WP_021294428.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=CCO53_RS12940;product=YdcF family protein;protein_id=WP_021294428.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 193888 194418 . + . ID=gene-CCO53_RS12945;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=CCO53_RS12945;old_locus_tag=CCO53_12925 NZ_NPLZ01000006.1 Protein Homology CDS 193888 194418 . + 0 ID=cds-WP_000527279.1;Parent=gene-CCO53_RS12945;Dbxref=GenBank:WP_000527279.1;Name=WP_000527279.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=CCO53_RS12945;product=cytochrome b561;protein_id=WP_000527279.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 194689 195351 . - . ID=gene-CCO53_RS12950;Name=CCO53_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12950;old_locus_tag=CCO53_12930 NZ_NPLZ01000006.1 Protein Homology CDS 194689 195351 . - 0 ID=cds-WP_000683309.1;Parent=gene-CCO53_RS12950;Dbxref=GenBank:WP_000683309.1;Name=WP_000683309.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=CCO53_RS12950;product=class I SAM-dependent methyltransferase;protein_id=WP_000683309.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 196307 196651 . + . ID=gene-CCO53_RS12955;Name=CCO53_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12955;old_locus_tag=CCO53_12935 NZ_NPLZ01000006.1 Protein Homology CDS 196307 196651 . + 0 ID=cds-WP_058331470.1;Parent=gene-CCO53_RS12955;Dbxref=GenBank:WP_058331470.1;Name=WP_058331470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=CCO53_RS12955;product=DUF1294 domain-containing protein;protein_id=WP_058331470.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 196772 197998 . - . ID=gene-CCO53_RS12960;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=CCO53_RS12960;old_locus_tag=CCO53_12940 NZ_NPLZ01000006.1 Protein Homology CDS 196772 197998 . - 0 ID=cds-WP_058331471.1;Parent=gene-CCO53_RS12960;Dbxref=GenBank:WP_058331471.1;Name=WP_058331471.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=CCO53_RS12960;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_058331471.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 198424 199140 . + . ID=gene-CCO53_RS12965;Name=CCO53_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12965;old_locus_tag=CCO53_12945 NZ_NPLZ01000006.1 Protein Homology CDS 198424 199140 . + 0 ID=cds-WP_076726614.1;Parent=gene-CCO53_RS12965;Dbxref=GenBank:WP_076726614.1;Name=WP_076726614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=CCO53_RS12965;product=hypothetical protein;protein_id=WP_076726614.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 199271 199672 . - . ID=gene-CCO53_RS12970;Name=CCO53_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12970;old_locus_tag=CCO53_12950 NZ_NPLZ01000006.1 Protein Homology CDS 199271 199672 . - 0 ID=cds-WP_080160226.1;Parent=gene-CCO53_RS12970;Dbxref=GenBank:WP_080160226.1;Name=WP_080160226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=CCO53_RS12970;product=effector protein;protein_id=WP_080160226.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 200196 200471 . + . ID=gene-CCO53_RS12975;Name=CCO53_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12975;old_locus_tag=CCO53_12955 NZ_NPLZ01000006.1 Protein Homology CDS 200196 200471 . + 0 ID=cds-WP_001120770.1;Parent=gene-CCO53_RS12975;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=CCO53_RS12975;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 200503 201621 . + . ID=gene-CCO53_RS12980;Name=CCO53_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12980;old_locus_tag=CCO53_12960 NZ_NPLZ01000006.1 Protein Homology CDS 200503 201621 . + 0 ID=cds-WP_000842141.1;Parent=gene-CCO53_RS12980;Dbxref=GenBank:WP_000842141.1;Name=WP_000842141.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=CCO53_RS12980;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842141.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 201790 203415 . + . ID=gene-CCO53_RS12990;Name=CCO53_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12990;old_locus_tag=CCO53_12970 NZ_NPLZ01000006.1 Protein Homology CDS 201790 203415 . + 0 ID=cds-WP_021294433.1;Parent=gene-CCO53_RS12990;Dbxref=GenBank:WP_021294433.1;Name=WP_021294433.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=CCO53_RS12990;product=methyl-accepting chemotaxis protein;protein_id=WP_021294433.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 203476 204399 . - . ID=gene-CCO53_RS12995;Name=CCO53_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS12995;old_locus_tag=CCO53_12975 NZ_NPLZ01000006.1 Protein Homology CDS 203476 204399 . - 0 ID=cds-WP_000414259.1;Parent=gene-CCO53_RS12995;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=CCO53_RS12995;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 204692 206035 . + . ID=gene-CCO53_RS13000;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=CCO53_RS13000;old_locus_tag=CCO53_12980 NZ_NPLZ01000006.1 Protein Homology CDS 204692 206035 . + 0 ID=cds-WP_000024091.1;Parent=gene-CCO53_RS13000;Dbxref=GenBank:WP_000024091.1;Name=WP_000024091.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=CCO53_RS13000;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000024091.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 206084 207592 . + . ID=gene-CCO53_RS13005;Name=CCO53_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13005;old_locus_tag=CCO53_12985 NZ_NPLZ01000006.1 Protein Homology CDS 206084 207592 . + 0 ID=cds-WP_000933978.1;Parent=gene-CCO53_RS13005;Dbxref=GenBank:WP_000933978.1;Name=WP_000933978.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=CCO53_RS13005;product=carboxylesterase/lipase family protein;protein_id=WP_000933978.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 207812 209467 . + . ID=gene-CCO53_RS13010;Name=CCO53_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13010;old_locus_tag=CCO53_12990 NZ_NPLZ01000006.1 Protein Homology CDS 207812 209467 . + 0 ID=cds-WP_058331473.1;Parent=gene-CCO53_RS13010;Dbxref=GenBank:WP_058331473.1;Name=WP_058331473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=CCO53_RS13010;product=glucan biosynthesis protein D;protein_id=WP_058331473.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 209663 210238 . + . ID=gene-CCO53_RS13015;Name=CCO53_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13015;old_locus_tag=CCO53_12995 NZ_NPLZ01000006.1 Protein Homology CDS 209663 210238 . + 0 ID=cds-WP_001024324.1;Parent=gene-CCO53_RS13015;Dbxref=GenBank:WP_001024324.1;Name=WP_001024324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=CCO53_RS13015;product=YceI family protein;protein_id=WP_001024324.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 210416 211135 . - . ID=gene-CCO53_RS13020;Name=CCO53_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13020;old_locus_tag=CCO53_13000 NZ_NPLZ01000006.1 Protein Homology CDS 210416 211135 . - 0 ID=cds-WP_000023780.1;Parent=gene-CCO53_RS13020;Dbxref=GenBank:WP_000023780.1;Name=WP_000023780.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023780.1;locus_tag=CCO53_RS13020;product=FadR/GntR family transcriptional regulator;protein_id=WP_000023780.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 211226 212317 . - . ID=gene-CCO53_RS13025;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=CCO53_RS13025;old_locus_tag=CCO53_13005 NZ_NPLZ01000006.1 Protein Homology CDS 211226 212317 . - 0 ID=cds-WP_001131637.1;Parent=gene-CCO53_RS13025;Dbxref=GenBank:WP_001131637.1;Name=WP_001131637.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131634.1;locus_tag=CCO53_RS13025;product=L-idonate 5-dehydrogenase;protein_id=WP_001131637.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 212286 213647 . - . ID=gene-CCO53_RS13030;Name=CCO53_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13030;old_locus_tag=CCO53_13010 NZ_NPLZ01000006.1 Protein Homology CDS 212286 213647 . - 0 ID=cds-WP_000648129.1;Parent=gene-CCO53_RS13030;Dbxref=GenBank:WP_000648129.1;Name=WP_000648129.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=CCO53_RS13030;product=MFS transporter;protein_id=WP_000648129.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 213731 214498 . - . ID=gene-CCO53_RS13035;Name=CCO53_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13035;old_locus_tag=CCO53_13015 NZ_NPLZ01000006.1 Protein Homology CDS 213731 214498 . - 0 ID=cds-WP_000125686.1;Parent=gene-CCO53_RS13035;Dbxref=GenBank:WP_000125686.1;Name=WP_000125686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=CCO53_RS13035;product=SDR family oxidoreductase;protein_id=WP_000125686.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 214836 216089 . + . ID=gene-CCO53_RS13040;Name=CCO53_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13040;old_locus_tag=CCO53_13020 NZ_NPLZ01000006.1 Protein Homology CDS 214836 216089 . + 0 ID=cds-WP_000067287.1;Parent=gene-CCO53_RS13040;Dbxref=GenBank:WP_000067287.1;Name=WP_000067287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=CCO53_RS13040;product=enolase C-terminal domain-like protein;protein_id=WP_000067287.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 216230 216667 . - . ID=gene-CCO53_RS13045;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=CCO53_RS13045;old_locus_tag=CCO53_13025 NZ_NPLZ01000006.1 Protein Homology CDS 216230 216667 . - 0 ID=cds-WP_023218173.1;Parent=gene-CCO53_RS13045;Dbxref=GenBank:WP_023218173.1;Name=WP_023218173.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=CCO53_RS13045;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_023218173.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 216667 217458 . - . ID=gene-CCO53_RS13050;Name=CCO53_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13050;old_locus_tag=CCO53_13030 NZ_NPLZ01000006.1 Protein Homology CDS 216667 217458 . - 0 ID=cds-WP_001670738.1;Parent=gene-CCO53_RS13050;Dbxref=GenBank:WP_001670738.1;Name=WP_001670738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=CCO53_RS13050;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 217474 218106 . - . ID=gene-CCO53_RS13055;Name=CCO53_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13055;old_locus_tag=CCO53_13035 NZ_NPLZ01000006.1 Protein Homology CDS 217474 218106 . - 0 ID=cds-WP_000600620.1;Parent=gene-CCO53_RS13055;Dbxref=GenBank:WP_000600620.1;Name=WP_000600620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=CCO53_RS13055;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600620.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 218118 218555 . - . ID=gene-CCO53_RS13060;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=CCO53_RS13060;old_locus_tag=CCO53_13040 NZ_NPLZ01000006.1 Protein Homology CDS 218118 218555 . - 0 ID=cds-WP_000606458.1;Parent=gene-CCO53_RS13060;Dbxref=GenBank:WP_000606458.1;Name=WP_000606458.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=CCO53_RS13060;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606458.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 218687 219493 . - . ID=gene-CCO53_RS13065;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=CCO53_RS13065;old_locus_tag=CCO53_13045 NZ_NPLZ01000006.1 Protein Homology CDS 218687 219493 . - 0 ID=cds-WP_000118619.1;Parent=gene-CCO53_RS13065;Dbxref=GenBank:WP_000118619.1;Name=WP_000118619.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=CCO53_RS13065;product=BtpA family protein SgcQ;protein_id=WP_000118619.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 219507 220820 . - . ID=gene-CCO53_RS13070;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=CCO53_RS13070;old_locus_tag=CCO53_13050 NZ_NPLZ01000006.1 Protein Homology CDS 219507 220820 . - 0 ID=cds-WP_000460835.1;Parent=gene-CCO53_RS13070;Dbxref=GenBank:WP_000460835.1;Name=WP_000460835.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=CCO53_RS13070;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_000460835.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 220831 221112 . - . ID=gene-CCO53_RS13075;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=CCO53_RS13075;old_locus_tag=CCO53_13055 NZ_NPLZ01000006.1 Protein Homology CDS 220831 221112 . - 0 ID=cds-WP_000976132.1;Parent=gene-CCO53_RS13075;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=CCO53_RS13075;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 221109 222227 . - . ID=gene-CCO53_RS13080;Name=CCO53_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13080;old_locus_tag=CCO53_13060 NZ_NPLZ01000006.1 Protein Homology CDS 221109 222227 . - 0 ID=cds-WP_094887701.1;Parent=gene-CCO53_RS13080;Dbxref=GenBank:WP_094887701.1;Name=WP_094887701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=CCO53_RS13080;product=M42 family metallopeptidase;protein_id=WP_094887701.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 222444 222983 . + . ID=gene-CCO53_RS13085;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=CCO53_RS13085;old_locus_tag=CCO53_13065 NZ_NPLZ01000006.1 Protein Homology CDS 222444 222983 . + 0 ID=cds-WP_000229311.1;Parent=gene-CCO53_RS13085;Dbxref=GenBank:WP_000229311.1;Name=WP_000229311.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=CCO53_RS13085;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229311.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 222980 223960 . - . ID=gene-CCO53_RS13090;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=CCO53_RS13090;old_locus_tag=CCO53_13070 NZ_NPLZ01000006.1 Protein Homology CDS 222980 223960 . - 0 ID=cds-WP_000170584.1;Parent=gene-CCO53_RS13090;Dbxref=GenBank:WP_000170584.1;Name=WP_000170584.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=CCO53_RS13090;product=YdcK family protein;protein_id=WP_000170584.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 224067 225080 . + . ID=gene-CCO53_RS13095;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=CCO53_RS13095;old_locus_tag=CCO53_13075 NZ_NPLZ01000006.1 Protein Homology CDS 224067 225080 . + 0 ID=cds-WP_001243996.1;Parent=gene-CCO53_RS13095;Dbxref=GenBank:WP_001243996.1;Name=WP_001243996.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=CCO53_RS13095;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001243996.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 225067 225663 . + . ID=gene-CCO53_RS13100;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=CCO53_RS13100;old_locus_tag=CCO53_13080 NZ_NPLZ01000006.1 Protein Homology CDS 225067 225663 . + 0 ID=cds-WP_000218277.1;Parent=gene-CCO53_RS13100;Dbxref=GenBank:WP_000218277.1;Name=WP_000218277.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=CCO53_RS13100;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218277.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 225819 226487 . + . ID=gene-CCO53_RS13105;Name=CCO53_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13105;old_locus_tag=CCO53_13085 NZ_NPLZ01000006.1 Protein Homology CDS 225819 226487 . + 0 ID=cds-WP_001259025.1;Parent=gene-CCO53_RS13105;Dbxref=GenBank:WP_001259025.1;Name=WP_001259025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=CCO53_RS13105;product=DUF3313 domain-containing protein;protein_id=WP_001259025.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 226541 227719 . - . ID=gene-CCO53_RS13110;Name=CCO53_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13110;old_locus_tag=CCO53_13090 NZ_NPLZ01000006.1 Protein Homology CDS 226541 227719 . - 0 ID=cds-WP_061372440.1;Parent=gene-CCO53_RS13110;Dbxref=GenBank:WP_061372440.1;Name=WP_061372440.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=CCO53_RS13110;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_061372440.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 227812 228348 . + . ID=gene-CCO53_RS13115;Name=CCO53_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13115;old_locus_tag=CCO53_13095 NZ_NPLZ01000006.1 Protein Homology CDS 227812 228348 . + 0 ID=cds-WP_000369536.1;Parent=gene-CCO53_RS13115;Dbxref=GenBank:WP_000369536.1;Name=WP_000369536.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=CCO53_RS13115;product=helix-turn-helix domain-containing protein;protein_id=WP_000369536.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 228427 230391 . + . ID=gene-CCO53_RS13120;Name=CCO53_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13120;old_locus_tag=CCO53_13100 NZ_NPLZ01000006.1 Protein Homology CDS 228427 230391 . + 0 ID=cds-WP_001249753.1;Parent=gene-CCO53_RS13120;Dbxref=GenBank:WP_001249753.1;Name=WP_001249753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=CCO53_RS13120;product=peptidase U32 family protein;protein_id=WP_001249753.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 230392 230622 . - . ID=gene-CCO53_RS13125;Name=CCO53_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13125;old_locus_tag=CCO53_13105 NZ_NPLZ01000006.1 Protein Homology CDS 230392 230622 . - 0 ID=cds-WP_001537894.1;Parent=gene-CCO53_RS13125;Dbxref=GenBank:WP_001537894.1;Name=WP_001537894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=CCO53_RS13125;product=YncJ family protein;protein_id=WP_001537894.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 231895 232743 . - . ID=gene-CCO53_RS13130;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=CCO53_RS13130;old_locus_tag=CCO53_13110 NZ_NPLZ01000006.1 Protein Homology CDS 231895 232743 . - 0 ID=cds-WP_094887702.1;Parent=gene-CCO53_RS13130;Dbxref=GenBank:WP_094887702.1;Name=WP_094887702.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001123158.1;locus_tag=CCO53_RS13130;product=SPI-2 type III secretion system effector PipB;protein_id=WP_094887702.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq pseudogene 232847 233980 . - . ID=gene-CCO53_RS13135;Name=CCO53_RS13135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS13135;old_locus_tag=CCO53_13115;partial=true;pseudo=true;start_range=.,232847 NZ_NPLZ01000006.1 Protein Homology CDS 232847 233980 . - 0 ID=cds-CCO53_RS13135;Parent=gene-CCO53_RS13135;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=CCO53_RS13135;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,232847;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 235952 236722 . + . ID=gene-CCO53_RS13145;Name=CCO53_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13145;old_locus_tag=CCO53_13125 NZ_NPLZ01000006.1 Protein Homology CDS 235952 236722 . + 0 ID=cds-WP_094887703.1;Parent=gene-CCO53_RS13145;Dbxref=GenBank:WP_094887703.1;Name=WP_094887703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=CCO53_RS13145;product=M15 family metallopeptidase;protein_id=WP_094887703.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 236858 238282 . + . ID=gene-CCO53_RS13150;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=CCO53_RS13150;old_locus_tag=CCO53_13130 NZ_NPLZ01000006.1 Protein Homology CDS 236858 238282 . + 0 ID=cds-WP_058331484.1;Parent=gene-CCO53_RS13150;Dbxref=GenBank:WP_058331484.1;Name=WP_058331484.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=CCO53_RS13150;product=GntR family transcriptional regulator YdcR;protein_id=WP_058331484.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 238397 239842 . + . ID=gene-CCO53_RS13155;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=CCO53_RS13155;old_locus_tag=CCO53_13135 NZ_NPLZ01000006.1 Protein Homology CDS 238397 239842 . + 0 ID=cds-WP_000158098.1;Parent=gene-CCO53_RS13155;Dbxref=GenBank:WP_000158098.1;Name=WP_000158098.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=CCO53_RS13155;product=aminobutyraldehyde dehydrogenase;protein_id=WP_000158098.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 239947 240042 . - . ID=gene-CCO53_RS13160;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=CCO53_RS13160;old_locus_tag=CCO53_13140 NZ_NPLZ01000006.1 Protein Homology CDS 239947 240042 . - 0 ID=cds-WP_001103198.1;Parent=gene-CCO53_RS13160;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=CCO53_RS13160;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 240241 240414 . + . ID=gene-CCO53_RS13165;Name=CCO53_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13165;old_locus_tag=CCO53_13145 NZ_NPLZ01000006.1 Protein Homology CDS 240241 240414 . + 0 ID=cds-WP_001522647.1;Parent=gene-CCO53_RS13165;Dbxref=GenBank:WP_001522647.1;Name=WP_001522647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=CCO53_RS13165;product=GhoT/OrtT family toxin;protein_id=WP_001522647.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 240459 242603 . - . ID=gene-CCO53_RS13170;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=CCO53_RS13170;old_locus_tag=CCO53_13150 NZ_NPLZ01000006.1 Protein Homology CDS 240459 242603 . - 0 ID=cds-WP_094887704.1;Parent=gene-CCO53_RS13170;Dbxref=GenBank:WP_094887704.1;Name=WP_094887704.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=CCO53_RS13170;product=virulence-associated effector SrfC;protein_id=WP_094887704.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 242600 245581 . - . ID=gene-CCO53_RS13175;Name=CCO53_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13175;old_locus_tag=CCO53_13155 NZ_NPLZ01000006.1 Protein Homology CDS 242600 245581 . - 0 ID=cds-WP_080160411.1;Parent=gene-CCO53_RS13175;Dbxref=GenBank:WP_080160411.1;Name=WP_080160411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=CCO53_RS13175;product=virulence factor SrfB;protein_id=WP_080160411.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 245586 246911 . - . ID=gene-CCO53_RS13180;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=CCO53_RS13180;old_locus_tag=CCO53_13160 NZ_NPLZ01000006.1 Protein Homology CDS 245586 246911 . - 0 ID=cds-WP_061372444.1;Parent=gene-CCO53_RS13180;Dbxref=GenBank:WP_061372444.1;Name=WP_061372444.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=CCO53_RS13180;product=virulence-associated effector SrfA;protein_id=WP_061372444.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 247135 247368 . + . ID=gene-CCO53_RS13185;Name=CCO53_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13185;old_locus_tag=CCO53_13165 NZ_NPLZ01000006.1 Protein Homology CDS 247135 247368 . + 0 ID=cds-WP_000018720.1;Parent=gene-CCO53_RS13185;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=CCO53_RS13185;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 247373 247822 . - . ID=gene-CCO53_RS13190;Name=CCO53_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13190;old_locus_tag=CCO53_13170 NZ_NPLZ01000006.1 Protein Homology CDS 247373 247822 . - 0 ID=cds-WP_001076571.1;Parent=gene-CCO53_RS13190;Dbxref=GenBank:WP_001076571.1;Name=WP_001076571.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=CCO53_RS13190;product=DMT family transporter;protein_id=WP_001076571.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 247822 248337 . - . ID=gene-CCO53_RS13195;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=CCO53_RS13195;old_locus_tag=CCO53_13175 NZ_NPLZ01000006.1 Protein Homology CDS 247822 248337 . - 0 ID=cds-WP_000155373.1;Parent=gene-CCO53_RS13195;Dbxref=GenBank:WP_000155373.1;Name=WP_000155373.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=CCO53_RS13195;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155373.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 248549 249586 . + . ID=gene-CCO53_RS13200;Name=CCO53_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13200;old_locus_tag=CCO53_13180 NZ_NPLZ01000006.1 Protein Homology CDS 248549 249586 . + 0 ID=cds-WP_017465903.1;Parent=gene-CCO53_RS13200;Dbxref=GenBank:WP_017465903.1;Name=WP_017465903.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=CCO53_RS13200;product=NADP-dependent oxidoreductase;protein_id=WP_017465903.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 249920 250585 . + . ID=gene-CCO53_RS13205;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=CCO53_RS13205;old_locus_tag=CCO53_13185 NZ_NPLZ01000006.1 Protein Homology CDS 249920 250585 . + 0 ID=cds-WP_058331487.1;Parent=gene-CCO53_RS13205;Dbxref=GenBank:WP_058331487.1;Name=WP_058331487.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=CCO53_RS13205;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_058331487.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 250641 252761 . - . ID=gene-CCO53_RS13210;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=CCO53_RS13210;old_locus_tag=CCO53_13190 NZ_NPLZ01000006.1 Protein Homology CDS 250641 252761 . - 0 ID=cds-WP_058331488.1;Parent=gene-CCO53_RS13210;Dbxref=GenBank:WP_058331488.1;Name=WP_058331488.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=CCO53_RS13210;product=TonB-dependent receptor PqqU;protein_id=WP_058331488.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 253025 254086 . + . ID=gene-CCO53_RS13215;Name=CCO53_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13215;old_locus_tag=CCO53_13195 NZ_NPLZ01000006.1 Protein Homology CDS 253025 254086 . + 0 ID=cds-WP_000550642.1;Parent=gene-CCO53_RS13215;Dbxref=GenBank:WP_000550642.1;Name=WP_000550642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=CCO53_RS13215;product=YncE family protein;protein_id=WP_000550642.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 254231 254452 . + . ID=gene-CCO53_RS13220;Name=CCO53_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13220;old_locus_tag=CCO53_13200 NZ_NPLZ01000006.1 Protein Homology CDS 254231 254452 . + 0 ID=cds-WP_000732362.1;Parent=gene-CCO53_RS13220;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=CCO53_RS13220;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 254529 256022 . - . ID=gene-CCO53_RS13225;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=CCO53_RS13225;old_locus_tag=CCO53_13205 NZ_NPLZ01000006.1 Protein Homology CDS 254529 256022 . - 0 ID=cds-WP_058331490.1;Parent=gene-CCO53_RS13225;Dbxref=GenBank:WP_058331490.1;Name=WP_058331490.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=CCO53_RS13225;product=L-asparagine permease;protein_id=WP_058331490.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 256535 257167 . + . ID=gene-CCO53_RS13230;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=CCO53_RS13230;old_locus_tag=CCO53_13210 NZ_NPLZ01000006.1 Protein Homology CDS 256535 257167 . + 0 ID=cds-WP_058331491.1;Parent=gene-CCO53_RS13230;Dbxref=GenBank:WP_058331491.1;Name=WP_058331491.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=CCO53_RS13230;product=type III secretion system effector SteA;protein_id=WP_058331491.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 257451 258296 . + . ID=gene-CCO53_RS13240;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=CCO53_RS13240;old_locus_tag=CCO53_13220 NZ_NPLZ01000006.1 Protein Homology CDS 257451 258296 . + 0 ID=cds-WP_058331492.1;Parent=gene-CCO53_RS13240;Dbxref=GenBank:WP_058331492.1;Name=WP_058331492.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=CCO53_RS13240;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_058331492.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 258332 259225 . - . ID=gene-CCO53_RS13245;Name=CCO53_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13245;old_locus_tag=CCO53_13225 NZ_NPLZ01000006.1 Protein Homology CDS 258332 259225 . - 0 ID=cds-WP_058331493.1;Parent=gene-CCO53_RS13245;Dbxref=GenBank:WP_058331493.1;Name=WP_058331493.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=CCO53_RS13245;product=PhzF family isomerase;protein_id=WP_058331493.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 259330 260010 . - . ID=gene-CCO53_RS13250;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO53_RS13250;old_locus_tag=CCO53_13230 NZ_NPLZ01000006.1 Protein Homology CDS 259330 260010 . - 0 ID=cds-WP_000617103.1;Parent=gene-CCO53_RS13250;Dbxref=GenBank:WP_000617103.1;Name=WP_000617103.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=CCO53_RS13250;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617103.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 260007 260702 . - . ID=gene-CCO53_RS13255;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=CCO53_RS13255;old_locus_tag=CCO53_13235 NZ_NPLZ01000006.1 Protein Homology CDS 260007 260702 . - 0 ID=cds-WP_023214604.1;Parent=gene-CCO53_RS13255;Dbxref=GenBank:WP_023214604.1;Name=WP_023214604.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=CCO53_RS13255;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_023214604.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 260702 262246 . - . ID=gene-CCO53_RS13260;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO53_RS13260;old_locus_tag=CCO53_13240 NZ_NPLZ01000006.1 Protein Homology CDS 260702 262246 . - 0 ID=cds-WP_000702591.1;Parent=gene-CCO53_RS13260;Dbxref=GenBank:WP_000702591.1;Name=WP_000702591.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=CCO53_RS13260;product=nitrate reductase subunit beta;protein_id=WP_000702591.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 262243 265983 . - . ID=gene-CCO53_RS13265;Name=CCO53_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13265;old_locus_tag=CCO53_13245 NZ_NPLZ01000006.1 Protein Homology CDS 262243 265983 . - 0 ID=cds-WP_076726573.1;Parent=gene-CCO53_RS13265;Dbxref=GenBank:WP_076726573.1;Name=WP_076726573.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=CCO53_RS13265;product=nitrate reductase subunit alpha;protein_id=WP_076726573.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 266075 267463 . - . ID=gene-CCO53_RS13270;Name=CCO53_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13270;old_locus_tag=CCO53_13250 NZ_NPLZ01000006.1 Protein Homology CDS 266075 267463 . - 0 ID=cds-WP_058331494.1;Parent=gene-CCO53_RS13270;Dbxref=GenBank:WP_058331494.1;Name=WP_058331494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=CCO53_RS13270;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_058331494.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 267677 268255 . - . ID=gene-CCO53_RS13275;Name=CCO53_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13275;old_locus_tag=CCO53_13255 NZ_NPLZ01000006.1 Protein Homology CDS 267677 268255 . - 0 ID=cds-WP_058331495.1;Parent=gene-CCO53_RS13275;Dbxref=GenBank:WP_058331495.1;Name=WP_058331495.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=CCO53_RS13275;product=TetR family transcriptional regulator;protein_id=WP_058331495.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 268373 269860 . + . ID=gene-CCO53_RS13280;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=CCO53_RS13280;old_locus_tag=CCO53_13260 NZ_NPLZ01000006.1 Protein Homology CDS 268373 269860 . + 0 ID=cds-WP_000489731.1;Parent=gene-CCO53_RS13280;Dbxref=GenBank:WP_000489731.1;Name=WP_000489731.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=CCO53_RS13280;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489731.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 269885 270265 . - . ID=gene-CCO53_RS13285;Name=CCO53_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13285;old_locus_tag=CCO53_13265 NZ_NPLZ01000006.1 Protein Homology CDS 269885 270265 . - 0 ID=cds-WP_014343841.1;Parent=gene-CCO53_RS13285;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=CCO53_RS13285;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 270409 271497 . - . ID=gene-CCO53_RS13290;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=CCO53_RS13290;old_locus_tag=CCO53_13270 NZ_NPLZ01000006.1 Protein Homology CDS 270409 271497 . - 0 ID=cds-WP_000769037.1;Parent=gene-CCO53_RS13290;Dbxref=GenBank:WP_000769037.1;Name=WP_000769037.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=CCO53_RS13290;product=porin OmpD;protein_id=WP_000769037.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 272021 272902 . - . ID=gene-CCO53_RS13300;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=CCO53_RS13300;old_locus_tag=CCO53_13280 NZ_NPLZ01000006.1 Protein Homology CDS 272021 272902 . - 0 ID=cds-WP_000203786.1;Parent=gene-CCO53_RS13300;Dbxref=GenBank:WP_000203786.1;Name=WP_000203786.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=CCO53_RS13300;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000203786.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 273181 276228 . + . ID=gene-CCO53_RS13310;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO53_RS13310;old_locus_tag=CCO53_13290 NZ_NPLZ01000006.1 Protein Homology CDS 273181 276228 . + 0 ID=cds-WP_077905441.1;Parent=gene-CCO53_RS13310;Dbxref=GenBank:WP_077905441.1;Name=WP_077905441.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=CCO53_RS13310;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077905441.1;transl_except=(pos:273766..273768%2Caa:Sec);transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 276242 277126 . + . ID=gene-CCO53_RS13315;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO53_RS13315;old_locus_tag=CCO53_13295 NZ_NPLZ01000006.1 Protein Homology CDS 276242 277126 . + 0 ID=cds-WP_000061599.1;Parent=gene-CCO53_RS13315;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=CCO53_RS13315;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 277119 277775 . + . ID=gene-CCO53_RS13320;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=CCO53_RS13320;old_locus_tag=CCO53_13300 NZ_NPLZ01000006.1 Protein Homology CDS 277119 277775 . + 0 ID=cds-WP_000045658.1;Parent=gene-CCO53_RS13320;Dbxref=GenBank:WP_000045658.1;Name=WP_000045658.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=CCO53_RS13320;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045658.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 277874 278884 . - . ID=gene-CCO53_RS13325;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=CCO53_RS13325;old_locus_tag=CCO53_13305 NZ_NPLZ01000006.1 Protein Homology CDS 277874 278884 . - 0 ID=cds-WP_000642446.1;Parent=gene-CCO53_RS13325;Dbxref=GenBank:WP_000642446.1;Name=WP_000642446.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=CCO53_RS13325;product=alcohol dehydrogenase AdhP;protein_id=WP_000642446.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 279170 280867 . - . ID=gene-CCO53_RS13330;Name=CCO53_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13330;old_locus_tag=CCO53_13310 NZ_NPLZ01000006.1 Protein Homology CDS 279170 280867 . - 0 ID=cds-WP_023202472.1;Parent=gene-CCO53_RS13330;Dbxref=GenBank:WP_023202472.1;Name=WP_023202472.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=CCO53_RS13330;product=NAD-dependent malic enzyme;protein_id=WP_023202472.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 281044 281187 . - . ID=gene-CCO53_RS13335;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=CCO53_RS13335;old_locus_tag=CCO53_13315 NZ_NPLZ01000006.1 Protein Homology CDS 281044 281187 . - 0 ID=cds-WP_000841559.1;Parent=gene-CCO53_RS13335;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=CCO53_RS13335;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 281282 281497 . - . ID=gene-CCO53_RS13340;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=CCO53_RS13340;old_locus_tag=CCO53_13320 NZ_NPLZ01000006.1 Protein Homology CDS 281282 281497 . - 0 ID=cds-WP_000495700.1;Parent=gene-CCO53_RS13340;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=CCO53_RS13340;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 282008 282439 . + . ID=gene-CCO53_RS13345;Name=CCO53_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13345;old_locus_tag=CCO53_13325 NZ_NPLZ01000006.1 Protein Homology CDS 282008 282439 . + 0 ID=cds-WP_023218048.1;Parent=gene-CCO53_RS13345;Dbxref=GenBank:WP_023218048.1;Name=WP_023218048.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=CCO53_RS13345;product=OsmC family protein;protein_id=WP_023218048.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 282560 283471 . - . ID=gene-CCO53_RS13350;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=CCO53_RS13350;old_locus_tag=CCO53_13330 NZ_NPLZ01000006.1 Protein Homology CDS 282560 283471 . - 0 ID=cds-WP_058331496.1;Parent=gene-CCO53_RS13350;Dbxref=GenBank:WP_058331496.1;Name=WP_058331496.1;gbkey=CDS;gene=hlyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=CCO53_RS13350;product=hemolysin HlyE;protein_id=WP_058331496.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 283606 284241 . - . ID=gene-CCO53_RS13355;Name=CCO53_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13355;old_locus_tag=CCO53_13335 NZ_NPLZ01000006.1 Protein Homology CDS 283606 284241 . - 0 ID=cds-WP_058331497.1;Parent=gene-CCO53_RS13355;Dbxref=GenBank:WP_058331497.1;Name=WP_058331497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778346.1;locus_tag=CCO53_RS13355;product=hypothetical protein;protein_id=WP_058331497.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 285010 285339 . + . ID=gene-CCO53_RS13365;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=CCO53_RS13365;old_locus_tag=CCO53_13345 NZ_NPLZ01000006.1 Protein Homology CDS 285010 285339 . + 0 ID=cds-WP_001032161.1;Parent=gene-CCO53_RS13365;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=CCO53_RS13365;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 285482 286267 . + . ID=gene-CCO53_RS13370;Name=CCO53_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13370;old_locus_tag=CCO53_13350 NZ_NPLZ01000006.1 Protein Homology CDS 285482 286267 . + 0 ID=cds-WP_058331498.1;Parent=gene-CCO53_RS13370;Dbxref=GenBank:WP_058331498.1;Name=WP_058331498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=CCO53_RS13370;product=OBAP family protein;protein_id=WP_058331498.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 286396 288180 . + . ID=gene-CCO53_RS13375;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=CCO53_RS13375;old_locus_tag=CCO53_13355 NZ_NPLZ01000006.1 Protein Homology CDS 286396 288180 . + 0 ID=cds-WP_058331499.1;Parent=gene-CCO53_RS13375;Dbxref=GenBank:WP_058331499.1;Name=WP_058331499.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=CCO53_RS13375;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_058331499.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 288177 290705 . + . ID=gene-CCO53_RS13380;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=CCO53_RS13380;old_locus_tag=CCO53_13360 NZ_NPLZ01000006.1 Protein Homology CDS 288177 290705 . + 0 ID=cds-WP_080160407.1;Parent=gene-CCO53_RS13380;Dbxref=GenBank:WP_080160407.1;Name=WP_080160407.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=CCO53_RS13380;product=malto-oligosyltrehalose synthase;protein_id=WP_080160407.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 290762 292837 . + . ID=gene-CCO53_RS13385;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO53_RS13385;old_locus_tag=CCO53_13365 NZ_NPLZ01000006.1 Protein Homology CDS 290762 292837 . + 0 ID=cds-WP_080160406.1;Parent=gene-CCO53_RS13385;Dbxref=GenBank:WP_080160406.1;Name=WP_080160406.1;Ontology_term=GO:0005980,GO:0004133,GO:0004553;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=CCO53_RS13385;product=glycogen debranching protein GlgX;protein_id=WP_080160406.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq pseudogene 292885 293043 . - . ID=gene-CCO53_RS24030;Name=CCO53_RS24030;end_range=293043,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24030;partial=true;pseudo=true NZ_NPLZ01000006.1 Protein Homology CDS 292885 293043 . - 0 ID=cds-CCO53_RS24030;Parent=gene-CCO53_RS24030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=293043,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226988.1;locus_tag=CCO53_RS24030;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 293160 293492 . + . ID=gene-CCO53_RS13390;Name=CCO53_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13390;old_locus_tag=CCO53_13370 NZ_NPLZ01000006.1 GeneMarkS-2+ CDS 293160 293492 . + 0 ID=cds-WP_058331501.1;Parent=gene-CCO53_RS13390;Dbxref=GenBank:WP_058331501.1;Name=WP_058331501.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS13390;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_058331501.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 293479 293793 . + . ID=gene-CCO53_RS13395;Name=CCO53_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13395;old_locus_tag=CCO53_13375 NZ_NPLZ01000006.1 GeneMarkS-2+ CDS 293479 293793 . + 0 ID=cds-WP_058331502.1;Parent=gene-CCO53_RS13395;Dbxref=GenBank:WP_058331502.1;Name=WP_058331502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS13395;product=hypothetical protein;protein_id=WP_058331502.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 293982 294440 . + . ID=gene-CCO53_RS13405;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CCO53_RS13405;old_locus_tag=CCO53_13385 NZ_NPLZ01000006.1 Protein Homology CDS 293982 294440 . + 0 ID=cds-WP_000502119.1;Parent=gene-CCO53_RS13405;Dbxref=GenBank:WP_000502119.1;Name=WP_000502119.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=CCO53_RS13405;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502119.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 294814 294858 . - . ID=gene-CCO53_RS24380;Name=CCO53_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24380 NZ_NPLZ01000006.1 Protein Homology CDS 294814 294858 . - 0 ID=cds-WP_419555288.1;Parent=gene-CCO53_RS24380;Dbxref=GenBank:WP_419555288.1;Name=WP_419555288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019023.6;locus_tag=CCO53_RS24380;product=DUF1493 family protein;protein_id=WP_419555288.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq pseudogene 294857 294937 . + . ID=gene-CCO53_RS23680;Name=CCO53_RS23680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23680;partial=true;pseudo=true;start_range=.,294857 NZ_NPLZ01000006.1 Protein Homology CDS 294857 294937 . + 0 ID=cds-CCO53_RS23680;Parent=gene-CCO53_RS23680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313252.1;locus_tag=CCO53_RS23680;partial=true;product=RidA family protein;pseudo=true;start_range=.,294857;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 294985 296064 . - . ID=gene-CCO53_RS13420;Name=CCO53_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13420;old_locus_tag=CCO53_13400 NZ_NPLZ01000006.1 Protein Homology CDS 294985 296064 . - 0 ID=cds-WP_058331503.1;Parent=gene-CCO53_RS13420;Dbxref=GenBank:WP_058331503.1;Name=WP_058331503.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=CCO53_RS13420;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_058331503.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 296257 296745 . - . ID=gene-CCO53_RS13425;Name=CCO53_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13425;old_locus_tag=CCO53_13405 NZ_NPLZ01000006.1 Protein Homology CDS 296257 296745 . - 0 ID=cds-WP_001293634.1;Parent=gene-CCO53_RS13425;Dbxref=GenBank:WP_001293634.1;Name=WP_001293634.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=CCO53_RS13425;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293634.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 296790 298298 . + . ID=gene-CCO53_RS13430;Name=CCO53_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13430;old_locus_tag=CCO53_13410 NZ_NPLZ01000006.1 Protein Homology CDS 296790 298298 . + 0 ID=cds-WP_023202459.1;Parent=gene-CCO53_RS13430;Dbxref=GenBank:WP_023202459.1;Name=WP_023202459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=CCO53_RS13430;product=FAD-dependent oxidoreductase;protein_id=WP_023202459.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 298288 299529 . + . ID=gene-CCO53_RS13435;Name=CCO53_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13435;old_locus_tag=CCO53_13415 NZ_NPLZ01000006.1 Protein Homology CDS 298288 299529 . + 0 ID=cds-WP_058331504.1;Parent=gene-CCO53_RS13435;Dbxref=GenBank:WP_058331504.1;Name=WP_058331504.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=CCO53_RS13435;product=MFS transporter;protein_id=WP_058331504.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq pseudogene 299599 300601 . + . ID=gene-CCO53_RS24035;Name=CCO53_RS24035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24035;old_locus_tag=CCO53_13420;pseudo=true NZ_NPLZ01000006.1 Protein Homology CDS 299599 300601 . + 0 ID=cds-CCO53_RS24035;Parent=gene-CCO53_RS24035;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=CCO53_RS24035;product=PhoPQ-activated protein PqaA family protein;pseudo=true;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 300778 302064 . + . ID=gene-CCO53_RS13445;Name=CCO53_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13445;old_locus_tag=CCO53_13425 NZ_NPLZ01000006.1 Protein Homology CDS 300778 302064 . + 0 ID=cds-WP_000824240.1;Parent=gene-CCO53_RS13445;Dbxref=GenBank:WP_000824240.1;Name=WP_000824240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=CCO53_RS13445;product=MFS transporter;protein_id=WP_000824240.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 302039 303064 . + . ID=gene-CCO53_RS13450;Name=CCO53_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13450;old_locus_tag=CCO53_13430 NZ_NPLZ01000006.1 Protein Homology CDS 302039 303064 . + 0 ID=cds-WP_000864935.1;Parent=gene-CCO53_RS13450;Dbxref=GenBank:WP_000864935.1;Name=WP_000864935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=CCO53_RS13450;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864935.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 303123 303914 . - . ID=gene-CCO53_RS13455;Name=CCO53_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13455;old_locus_tag=CCO53_13435 NZ_NPLZ01000006.1 Protein Homology CDS 303123 303914 . - 0 ID=cds-WP_001518759.1;Parent=gene-CCO53_RS13455;Dbxref=GenBank:WP_001518759.1;Name=WP_001518759.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=CCO53_RS13455;product=FadR/GntR family transcriptional regulator;protein_id=WP_001518759.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 303960 305051 . - . ID=gene-CCO53_RS13460;Name=CCO53_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13460;old_locus_tag=CCO53_13440 NZ_NPLZ01000006.1 Protein Homology CDS 303960 305051 . - 0 ID=cds-WP_094887706.1;Parent=gene-CCO53_RS13460;Dbxref=GenBank:WP_094887706.1;Name=WP_094887706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=CCO53_RS13460;product=choloylglycine hydrolase family protein;protein_id=WP_094887706.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 305469 306572 . + . ID=gene-CCO53_RS13465;Name=CCO53_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13465;old_locus_tag=CCO53_13445 NZ_NPLZ01000006.1 Protein Homology CDS 305469 306572 . + 0 ID=cds-WP_001194448.1;Parent=gene-CCO53_RS13465;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=CCO53_RS13465;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 306575 308377 . + . ID=gene-CCO53_RS13470;Name=CCO53_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13470;old_locus_tag=CCO53_13450 NZ_NPLZ01000006.1 Protein Homology CDS 306575 308377 . + 0 ID=cds-WP_058331507.1;Parent=gene-CCO53_RS13470;Dbxref=GenBank:WP_058331507.1;Name=WP_058331507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=CCO53_RS13470;product=nickel-dependent hydrogenase large subunit;protein_id=WP_058331507.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 308328 309071 . + . ID=gene-CCO53_RS13475;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=CCO53_RS13475;old_locus_tag=CCO53_13455 NZ_NPLZ01000006.1 Protein Homology CDS 308328 309071 . + 0 ID=cds-WP_000924456.1;Parent=gene-CCO53_RS13475;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=CCO53_RS13475;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 309077 309685 . + . ID=gene-CCO53_RS13480;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=CCO53_RS13480;old_locus_tag=CCO53_13460 NZ_NPLZ01000006.1 Protein Homology CDS 309077 309685 . + 0 ID=cds-WP_000852664.1;Parent=gene-CCO53_RS13480;Dbxref=GenBank:WP_000852664.1;Name=WP_000852664.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=CCO53_RS13480;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852664.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 309685 309984 . + . ID=gene-CCO53_RS13485;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO53_RS13485;old_locus_tag=CCO53_13465 NZ_NPLZ01000006.1 Protein Homology CDS 309685 309984 . + 0 ID=cds-WP_000334904.1;Parent=gene-CCO53_RS13485;Dbxref=GenBank:WP_000334904.1;Name=WP_000334904.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=CCO53_RS13485;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334904.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 309981 310391 . + . ID=gene-CCO53_RS13490;Name=CCO53_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13490;old_locus_tag=CCO53_13470 NZ_NPLZ01000006.1 Protein Homology CDS 309981 310391 . + 0 ID=cds-WP_000155986.1;Parent=gene-CCO53_RS13490;Dbxref=GenBank:WP_000155986.1;Name=WP_000155986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=CCO53_RS13490;product=hydrogenase;protein_id=WP_000155986.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 310409 311470 . + . ID=gene-CCO53_RS13495;Name=CCO53_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13495;old_locus_tag=CCO53_13475 NZ_NPLZ01000006.1 Protein Homology CDS 310409 311470 . + 0 ID=cds-WP_001016746.1;Parent=gene-CCO53_RS13495;Dbxref=GenBank:WP_001016746.1;Name=WP_001016746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=CCO53_RS13495;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_001016746.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 311458 312345 . + . ID=gene-CCO53_RS13500;Name=CCO53_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13500;old_locus_tag=CCO53_13480 NZ_NPLZ01000006.1 Protein Homology CDS 311458 312345 . + 0 ID=cds-WP_023202393.1;Parent=gene-CCO53_RS13500;Dbxref=GenBank:WP_023202393.1;Name=WP_023202393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=CCO53_RS13500;product=hypothetical protein;protein_id=WP_023202393.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 312358 312699 . + . ID=gene-CCO53_RS13505;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO53_RS13505;old_locus_tag=CCO53_13485 NZ_NPLZ01000006.1 Protein Homology CDS 312358 312699 . + 0 ID=cds-WP_000544772.1;Parent=gene-CCO53_RS13505;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=CCO53_RS13505;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 312840 313958 . - . ID=gene-CCO53_RS13510;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO53_RS13510;old_locus_tag=CCO53_13490 NZ_NPLZ01000006.1 Protein Homology CDS 312840 313958 . - 0 ID=cds-WP_000758336.1;Parent=gene-CCO53_RS13510;Dbxref=GenBank:WP_000758336.1;Name=WP_000758336.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=CCO53_RS13510;product=porin OmpC;protein_id=WP_000758336.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 314675 315217 . + . ID=gene-CCO53_RS13515;Name=CCO53_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13515;old_locus_tag=CCO53_13495 NZ_NPLZ01000006.1 Protein Homology CDS 314675 315217 . + 0 ID=cds-WP_000513126.1;Parent=gene-CCO53_RS13515;Dbxref=GenBank:WP_000513126.1;Name=WP_000513126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=CCO53_RS13515;product=YybH family protein;protein_id=WP_000513126.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 315273 316187 . - . ID=gene-CCO53_RS13520;Name=CCO53_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13520;old_locus_tag=CCO53_13500 NZ_NPLZ01000006.1 Protein Homology CDS 315273 316187 . - 0 ID=cds-WP_176208738.1;Parent=gene-CCO53_RS13520;Dbxref=GenBank:WP_176208738.1;Name=WP_176208738.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=CCO53_RS13520;product=bestrophin family protein;protein_id=WP_176208738.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 316443 316802 . - . ID=gene-CCO53_RS13525;Name=CCO53_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13525;old_locus_tag=CCO53_13505 NZ_NPLZ01000006.1 Protein Homology CDS 316443 316802 . - 0 ID=cds-WP_000992444.1;Parent=gene-CCO53_RS13525;Dbxref=GenBank:WP_000992444.1;Name=WP_000992444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=CCO53_RS13525;product=DUF4186 domain-containing protein;protein_id=WP_000992444.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 316802 317728 . - . ID=gene-CCO53_RS13530;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=CCO53_RS13530;old_locus_tag=CCO53_13510 NZ_NPLZ01000006.1 Protein Homology CDS 316802 317728 . - 0 ID=cds-WP_000090081.1;Parent=gene-CCO53_RS13530;Dbxref=GenBank:WP_000090081.1;Name=WP_000090081.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=CCO53_RS13530;product=glutaminase B;protein_id=WP_000090081.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 317801 319189 . - . ID=gene-CCO53_RS13535;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=CCO53_RS13535;old_locus_tag=CCO53_13515 NZ_NPLZ01000006.1 Protein Homology CDS 317801 319189 . - 0 ID=cds-WP_023202397.1;Parent=gene-CCO53_RS13535;Dbxref=GenBank:WP_023202397.1;Name=WP_023202397.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=CCO53_RS13535;product=succinate-semialdehyde dehydrogenase;protein_id=WP_023202397.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 319292 320164 . + . ID=gene-CCO53_RS13540;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=CCO53_RS13540;old_locus_tag=CCO53_13520 NZ_NPLZ01000006.1 Protein Homology CDS 319292 320164 . + 0 ID=cds-WP_079965524.1;Parent=gene-CCO53_RS13540;Dbxref=GenBank:WP_079965524.1;Name=WP_079965524.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=CCO53_RS13540;product=putrescine utilization regulator PtrR;protein_id=WP_079965524.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 320280 321470 . + . ID=gene-CCO53_RS13545;Name=CCO53_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13545;old_locus_tag=CCO53_13525 NZ_NPLZ01000006.1 Protein Homology CDS 320280 321470 . + 0 ID=cds-WP_000154622.1;Parent=gene-CCO53_RS13545;Dbxref=GenBank:WP_000154622.1;Name=WP_000154622.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=CCO53_RS13545;product=sugar transporter;protein_id=WP_000154622.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 321518 322183 . - . ID=gene-CCO53_RS13550;Name=CCO53_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13550;old_locus_tag=CCO53_13530 NZ_NPLZ01000006.1 Protein Homology CDS 321518 322183 . - 0 ID=cds-WP_000968968.1;Parent=gene-CCO53_RS13550;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=CCO53_RS13550;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 322442 322876 . + . ID=gene-CCO53_RS13555;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=CCO53_RS13555;old_locus_tag=CCO53_13535 NZ_NPLZ01000006.1 Protein Homology CDS 322442 322876 . + 0 ID=cds-WP_094210680.1;Parent=gene-CCO53_RS13555;Dbxref=GenBank:WP_094210680.1;Name=WP_094210680.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=CCO53_RS13555;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_094210680.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 322896 323279 . + . ID=gene-CCO53_RS13560;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=CCO53_RS13560;old_locus_tag=CCO53_13540 NZ_NPLZ01000006.1 Protein Homology CDS 322896 323279 . + 0 ID=cds-WP_000091193.1;Parent=gene-CCO53_RS13560;Dbxref=GenBank:WP_000091193.1;Name=WP_000091193.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032424.1;locus_tag=CCO53_RS13560;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091193.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 323308 323523 . + . ID=gene-CCO53_RS13565;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=CCO53_RS13565;old_locus_tag=CCO53_13545 NZ_NPLZ01000006.1 Protein Homology CDS 323308 323523 . + 0 ID=cds-WP_094887707.1;Parent=gene-CCO53_RS13565;Dbxref=GenBank:WP_094887707.1;Name=WP_094887707.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=CCO53_RS13565;product=multiple antibiotic resistance protein MarB;protein_id=WP_094887707.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 323604 324506 . - . ID=gene-CCO53_RS13570;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=CCO53_RS13570;old_locus_tag=CCO53_13550 NZ_NPLZ01000006.1 Protein Homology CDS 323604 324506 . - 0 ID=cds-WP_094887708.1;Parent=gene-CCO53_RS13570;Dbxref=GenBank:WP_094887708.1;Name=WP_094887708.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=CCO53_RS13570;product=O-acetylserine/cysteine exporter;protein_id=WP_094887708.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 324734 325921 . + . ID=gene-CCO53_RS13575;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=CCO53_RS13575;old_locus_tag=CCO53_13555 NZ_NPLZ01000006.1 Protein Homology CDS 324734 325921 . + 0 ID=cds-WP_094887709.1;Parent=gene-CCO53_RS13575;Dbxref=GenBank:WP_094887709.1;Name=WP_094887709.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=CCO53_RS13575;product=efflux MFS transporter YdeE;protein_id=WP_094887709.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 326169 326264 . + . ID=gene-CCO53_RS13580;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=CCO53_RS13580;old_locus_tag=CCO53_13560 NZ_NPLZ01000006.1 Protein Homology CDS 326169 326264 . + 0 ID=cds-WP_000901531.1;Parent=gene-CCO53_RS13580;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=CCO53_RS13580;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 326611 327003 . - . ID=gene-CCO53_RS13585;Name=CCO53_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13585;old_locus_tag=CCO53_13565 NZ_NPLZ01000006.1 Protein Homology CDS 326611 327003 . - 0 ID=cds-WP_094887710.1;Parent=gene-CCO53_RS13585;Dbxref=GenBank:WP_094887710.1;Name=WP_094887710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=CCO53_RS13585;product=YdeI family stress tolerance OB fold protein;protein_id=WP_094887710.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 327387 327914 . + . ID=gene-CCO53_RS13590;Name=CCO53_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13590;old_locus_tag=CCO53_13570 NZ_NPLZ01000006.1 Protein Homology CDS 327387 327914 . + 0 ID=cds-WP_001522587.1;Parent=gene-CCO53_RS13590;Dbxref=GenBank:WP_001522587.1;Name=WP_001522587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=CCO53_RS13590;product=2-oxo-tetronate isomerase;protein_id=WP_001522587.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 328033 328215 . - . ID=gene-CCO53_RS13595;Name=CCO53_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13595;old_locus_tag=CCO53_13575 NZ_NPLZ01000006.1 Protein Homology CDS 328033 328215 . - 0 ID=cds-WP_000807642.1;Parent=gene-CCO53_RS13595;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=CCO53_RS13595;product=general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 328560 330602 . - . ID=gene-CCO53_RS13605;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=CCO53_RS13605;old_locus_tag=CCO53_13585 NZ_NPLZ01000006.1 Protein Homology CDS 328560 330602 . - 0 ID=cds-WP_000106261.1;Parent=gene-CCO53_RS13605;Dbxref=GenBank:WP_000106261.1;Name=WP_000106261.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=CCO53_RS13605;product=peptidyl-dipeptidase Dcp;protein_id=WP_000106261.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 330741 331487 . + . ID=gene-CCO53_RS13610;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=CCO53_RS13610;old_locus_tag=CCO53_13590 NZ_NPLZ01000006.1 Protein Homology CDS 330741 331487 . + 0 ID=cds-WP_094887711.1;Parent=gene-CCO53_RS13610;Dbxref=GenBank:WP_094887711.1;Name=WP_094887711.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=CCO53_RS13610;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_094887711.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 331617 332303 . + . ID=gene-CCO53_RS13615;Name=CCO53_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13615;old_locus_tag=CCO53_13595 NZ_NPLZ01000006.1 Protein Homology CDS 331617 332303 . + 0 ID=cds-WP_000215562.1;Parent=gene-CCO53_RS13615;Dbxref=GenBank:WP_000215562.1;Name=WP_000215562.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=CCO53_RS13615;product=GntR family transcriptional regulator;protein_id=WP_000215562.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 332484 332687 . + . ID=gene-CCO53_RS13620;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=CCO53_RS13620;old_locus_tag=CCO53_13600 NZ_NPLZ01000006.1 Protein Homology CDS 332484 332687 . + 0 ID=cds-WP_000989267.1;Parent=gene-CCO53_RS13620;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=CCO53_RS13620;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 332754 334220 . - . ID=gene-CCO53_RS13625;Name=CCO53_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13625;old_locus_tag=CCO53_13605 NZ_NPLZ01000006.1 Protein Homology CDS 332754 334220 . - 0 ID=cds-WP_094887712.1;Parent=gene-CCO53_RS13625;Dbxref=GenBank:WP_094887712.1;Name=WP_094887712.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=CCO53_RS13625;product=mannitol dehydrogenase family protein;protein_id=WP_094887712.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 334364 335743 . - . ID=gene-CCO53_RS13630;Name=CCO53_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13630;old_locus_tag=CCO53_13610 NZ_NPLZ01000006.1 Protein Homology CDS 334364 335743 . - 0 ID=cds-WP_000192118.1;Parent=gene-CCO53_RS13630;Dbxref=GenBank:WP_000192118.1;Name=WP_000192118.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=CCO53_RS13630;product=MFS transporter;protein_id=WP_000192118.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 335797 336816 . - . ID=gene-CCO53_RS13635;Name=CCO53_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13635;old_locus_tag=CCO53_13615 NZ_NPLZ01000006.1 Protein Homology CDS 335797 336816 . - 0 ID=cds-WP_023206416.1;Parent=gene-CCO53_RS13635;Dbxref=GenBank:WP_023206416.1;Name=WP_023206416.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=CCO53_RS13635;product=Zn-dependent oxidoreductase;protein_id=WP_023206416.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 336827 338041 . - . ID=gene-CCO53_RS13640;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=CCO53_RS13640;old_locus_tag=CCO53_13620 NZ_NPLZ01000006.1 Protein Homology CDS 336827 338041 . - 0 ID=cds-WP_094887713.1;Parent=gene-CCO53_RS13640;Dbxref=GenBank:WP_094887713.1;Name=WP_094887713.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=CCO53_RS13640;product=starvation-sensing protein RspA;protein_id=WP_094887713.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 338163 338489 . - . ID=gene-CCO53_RS13645;Name=CCO53_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13645;old_locus_tag=CCO53_13625 NZ_NPLZ01000006.1 Protein Homology CDS 338163 338489 . - 0 ID=cds-WP_000921389.1;Parent=gene-CCO53_RS13645;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=CCO53_RS13645;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 338642 338983 . + . ID=gene-CCO53_RS13650;Name=CCO53_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13650;old_locus_tag=CCO53_13630 NZ_NPLZ01000006.1 Protein Homology CDS 338642 338983 . + 0 ID=cds-WP_001066440.1;Parent=gene-CCO53_RS13650;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=CCO53_RS13650;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 339019 339579 . + . ID=gene-CCO53_RS13655;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=CCO53_RS13655;old_locus_tag=CCO53_13635 NZ_NPLZ01000006.1 Protein Homology CDS 339019 339579 . + 0 ID=cds-WP_000199997.1;Parent=gene-CCO53_RS13655;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=CCO53_RS13655;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 339620 340330 . - . ID=gene-CCO53_RS13660;Name=CCO53_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13660;old_locus_tag=CCO53_13640 NZ_NPLZ01000006.1 Protein Homology CDS 339620 340330 . - 0 ID=cds-WP_023257812.1;Parent=gene-CCO53_RS13660;Dbxref=GenBank:WP_023257812.1;Name=WP_023257812.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=CCO53_RS13660;product=YnfC family lipoprotein;protein_id=WP_023257812.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 340434 340742 . + . ID=gene-CCO53_RS13665;Name=CCO53_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13665;old_locus_tag=CCO53_13645 NZ_NPLZ01000006.1 Protein Homology CDS 340434 340742 . + 0 ID=cds-WP_000975516.1;Parent=gene-CCO53_RS13665;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=CCO53_RS13665;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 340899 343337 . + . ID=gene-CCO53_RS13670;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=CCO53_RS13670;old_locus_tag=CCO53_13650 NZ_NPLZ01000006.1 Protein Homology CDS 340899 343337 . + 0 ID=cds-WP_001117605.1;Parent=gene-CCO53_RS13670;Dbxref=GenBank:WP_001117605.1;Name=WP_001117605.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=CCO53_RS13670;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_001117605.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq gene 343436 345871 . + . ID=gene-CCO53_RS13675;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=CCO53_RS13675;old_locus_tag=CCO53_13655 NZ_NPLZ01000006.1 Protein Homology CDS 343436 345871 . + 0 ID=cds-WP_000705282.1;Parent=gene-CCO53_RS13675;Dbxref=GenBank:WP_000705282.1;Name=WP_000705282.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=CCO53_RS13675;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_000705282.1;transl_table=11 NZ_NPLZ01000006.1 RefSeq pseudogene 345882 346107 . + . ID=gene-CCO53_RS13680;Name=dmsB;end_range=346107,.;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=CCO53_RS13680;old_locus_tag=CCO53_13660;partial=true;pseudo=true NZ_NPLZ01000006.1 Protein Homology CDS 345882 346107 . + 0 ID=cds-CCO53_RS13680;Parent=gene-CCO53_RS13680;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=346107,.;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO53_RS13680;partial=true;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;pseudo=true;transl_table=11 ##sequence-region NZ_NPLZ01000007.1 1 240382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000007.1 RefSeq region 1 240382 . + . ID=NZ_NPLZ01000007.1:1..240382;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000007.1 RefSeq pseudogene 80 2413 . - . ID=gene-CCO53_RS13685;Name=CCO53_RS13685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS13685;old_locus_tag=CCO53_13665;partial=true;pseudo=true;start_range=.,80 NZ_NPLZ01000007.1 Protein Homology CDS 80 2413 . - 0 ID=cds-CCO53_RS13685;Parent=gene-CCO53_RS13685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=CCO53_RS13685;partial=true;product=AAA domain-containing protein;pseudo=true;start_range=.,80;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 2775 3045 . - . ID=gene-CCO53_RS24040;Name=CCO53_RS24040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24040;partial=true;pseudo=true;start_range=.,2775 NZ_NPLZ01000007.1 Protein Homology CDS 2775 3045 . - 0 ID=cds-CCO53_RS24040;Parent=gene-CCO53_RS24040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=CCO53_RS24040;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,2775;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 3466 3774 . - . ID=gene-CCO53_RS13695;Name=CCO53_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13695;old_locus_tag=CCO53_13675 NZ_NPLZ01000007.1 Protein Homology CDS 3466 3774 . - 0 ID=cds-WP_001199743.1;Parent=gene-CCO53_RS13695;Dbxref=GenBank:WP_001199743.1;Name=WP_001199743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=CCO53_RS13695;product=CcdB family protein;protein_id=WP_001199743.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 3777 4016 . - . ID=gene-CCO53_RS13700;Name=CCO53_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13700;old_locus_tag=CCO53_13680 NZ_NPLZ01000007.1 Protein Homology CDS 3777 4016 . - 0 ID=cds-WP_001118105.1;Parent=gene-CCO53_RS13700;Dbxref=GenBank:WP_001118105.1;Name=WP_001118105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=CCO53_RS13700;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_001118105.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 4125 4349 . - . ID=gene-CCO53_RS13705;Name=CCO53_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13705;old_locus_tag=CCO53_13685 NZ_NPLZ01000007.1 Protein Homology CDS 4125 4349 . - 0 ID=cds-WP_094887716.1;Parent=gene-CCO53_RS13705;Dbxref=GenBank:WP_094887716.1;Name=WP_094887716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168389.1;locus_tag=CCO53_RS13705;product=CopG family ribbon-helix-helix protein;protein_id=WP_094887716.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 4450 4995 . - . ID=gene-CCO53_RS13710;Name=CCO53_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13710;old_locus_tag=CCO53_13690 NZ_NPLZ01000007.1 Protein Homology CDS 4450 4995 . - 0 ID=cds-WP_373270785.1;Parent=gene-CCO53_RS13710;Dbxref=GenBank:WP_373270785.1;Name=WP_373270785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=CCO53_RS13710;product=DUF4942 domain-containing protein;protein_id=WP_373270785.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 5446 5530 . - . ID=gene-CCO53_RS13720;Name=CCO53_RS13720;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS13720;old_locus_tag=CCO53_13700 NZ_NPLZ01000007.1 tRNAscan-SE tRNA 5446 5530 . - . ID=rna-CCO53_RS13720;Parent=gene-CCO53_RS13720;anticodon=(pos:complement(5494..5496));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS13720;product=tRNA-Leu NZ_NPLZ01000007.1 tRNAscan-SE exon 5446 5530 . - . ID=exon-CCO53_RS13720-1;Parent=rna-CCO53_RS13720;anticodon=(pos:complement(5494..5496));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS13720;product=tRNA-Leu NZ_NPLZ01000007.1 RefSeq gene 5753 6772 . + . ID=gene-CCO53_RS13725;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=CCO53_RS13725;old_locus_tag=CCO53_13705 NZ_NPLZ01000007.1 Protein Homology CDS 5753 6772 . + 0 ID=cds-WP_000152563.1;Parent=gene-CCO53_RS13725;Dbxref=GenBank:WP_000152563.1;Name=WP_000152563.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=CCO53_RS13725;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000152563.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 6800 7330 . - . ID=gene-CCO53_RS13730;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=CCO53_RS13730;old_locus_tag=CCO53_13710 NZ_NPLZ01000007.1 Protein Homology CDS 6800 7330 . - 0 ID=cds-WP_094887717.1;Parent=gene-CCO53_RS13730;Dbxref=GenBank:WP_094887717.1;Name=WP_094887717.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=CCO53_RS13730;product=gluconokinase;protein_id=WP_094887717.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 7547 8578 . + . ID=gene-CCO53_RS13735;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=CCO53_RS13735;old_locus_tag=CCO53_13715 NZ_NPLZ01000007.1 Protein Homology CDS 7547 8578 . + 0 ID=cds-WP_000453360.1;Parent=gene-CCO53_RS13735;Dbxref=GenBank:WP_000453360.1;Name=WP_000453360.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=CCO53_RS13735;product=L-idonate 5-dehydrogenase;protein_id=WP_000453360.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 8603 9367 . + . ID=gene-CCO53_RS13740;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=CCO53_RS13740;old_locus_tag=CCO53_13720 NZ_NPLZ01000007.1 Protein Homology CDS 8603 9367 . + 0 ID=cds-WP_000998683.1;Parent=gene-CCO53_RS13740;Dbxref=GenBank:WP_000998683.1;Name=WP_000998683.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=CCO53_RS13740;product=gluconate 5-dehydrogenase;protein_id=WP_000998683.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 9429 10748 . + . ID=gene-CCO53_RS13745;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=pseudogene;locus_tag=CCO53_RS13745;old_locus_tag=CCO53_13725;pseudo=true NZ_NPLZ01000007.1 Protein Homology CDS 9429 10748 . + 0 ID=cds-CCO53_RS13745;Parent=gene-CCO53_RS13745;Note=internal stop;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=CCO53_RS13745;product=gnt-II system L-idonate transporter;pseudo=true;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 10812 11810 . + . ID=gene-CCO53_RS13750;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=CCO53_RS13750;old_locus_tag=CCO53_13730 NZ_NPLZ01000007.1 Protein Homology CDS 10812 11810 . + 0 ID=cds-WP_001244065.1;Parent=gene-CCO53_RS13750;Dbxref=GenBank:WP_001244065.1;Name=WP_001244065.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=CCO53_RS13750;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244065.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 12027 13109 . - . ID=gene-CCO53_RS13755;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=CCO53_RS13755;old_locus_tag=CCO53_13735 NZ_NPLZ01000007.1 Protein Homology CDS 12027 13109 . - 0 ID=cds-WP_001182242.1;Parent=gene-CCO53_RS13755;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=CCO53_RS13755;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 13109 14209 . - . ID=gene-CCO53_RS13760;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=CCO53_RS13760;old_locus_tag=CCO53_13740 NZ_NPLZ01000007.1 Protein Homology CDS 13109 14209 . - 0 ID=cds-WP_000584132.1;Parent=gene-CCO53_RS13760;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=CCO53_RS13760;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 14273 14323 . - . ID=gene-CCO53_RS24050;Name=CCO53_RS24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24050 NZ_NPLZ01000007.1 Protein Homology CDS 14273 14323 . - 0 ID=cds-WP_212724070.1;Parent=gene-CCO53_RS24050;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=CCO53_RS24050;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 14604 16115 . + . ID=gene-CCO53_RS13775;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=CCO53_RS13775;old_locus_tag=CCO53_13755 NZ_NPLZ01000007.1 Protein Homology CDS 14604 16115 . + 0 ID=cds-WP_000397158.1;Parent=gene-CCO53_RS13775;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=CCO53_RS13775;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 16252 16695 . + . ID=gene-CCO53_RS13780;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=CCO53_RS13780;old_locus_tag=CCO53_13760 NZ_NPLZ01000007.1 Protein Homology CDS 16252 16695 . + 0 ID=cds-WP_001523689.1;Parent=gene-CCO53_RS13780;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=CCO53_RS13780;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 16695 19550 . + . ID=gene-CCO53_RS13785;Name=CCO53_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13785;old_locus_tag=CCO53_13765 NZ_NPLZ01000007.1 Protein Homology CDS 16695 19550 . + 0 ID=cds-WP_080160326.1;Parent=gene-CCO53_RS13785;Dbxref=GenBank:WP_080160326.1;Name=WP_080160326.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=CCO53_RS13785;product=valine--tRNA ligase;protein_id=WP_080160326.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 19692 20879 . - . ID=gene-CCO53_RS13790;Name=CCO53_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13790;old_locus_tag=CCO53_13770 NZ_NPLZ01000007.1 Protein Homology CDS 19692 20879 . - 0 ID=cds-WP_001534452.1;Parent=gene-CCO53_RS13790;Dbxref=GenBank:WP_001534452.1;Name=WP_001534452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=CCO53_RS13790;product=YjgN family protein;protein_id=WP_001534452.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 21074 21577 . + . ID=gene-CCO53_RS13795;Name=CCO53_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13795;old_locus_tag=CCO53_13775 NZ_NPLZ01000007.1 Protein Homology CDS 21074 21577 . + 0 ID=cds-WP_001519079.1;Parent=gene-CCO53_RS13795;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=CCO53_RS13795;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 21777 22172 . + . ID=gene-CCO53_RS13800;Name=CCO53_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13800;old_locus_tag=CCO53_13780 NZ_NPLZ01000007.1 Protein Homology CDS 21777 22172 . + 0 ID=cds-WP_023193114.1;Parent=gene-CCO53_RS13800;Dbxref=GenBank:WP_023193114.1;Name=WP_023193114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015690906.1;locus_tag=CCO53_RS13800;product=DUF3617 family protein;protein_id=WP_023193114.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 22406 23218 . - . ID=gene-CCO53_RS13805;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=CCO53_RS13805;old_locus_tag=CCO53_13785 NZ_NPLZ01000007.1 Protein Homology CDS 22406 23218 . - 0 ID=cds-WP_000218452.1;Parent=gene-CCO53_RS13805;Dbxref=GenBank:WP_000218452.1;Name=WP_000218452.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=CCO53_RS13805;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218452.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 23230 23646 . - . ID=gene-CCO53_RS13810;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=CCO53_RS13810;old_locus_tag=CCO53_13790 NZ_NPLZ01000007.1 Protein Homology CDS 23230 23646 . - 0 ID=cds-WP_000002940.1;Parent=gene-CCO53_RS13810;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=CCO53_RS13810;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 23747 23842 . + . ID=gene-CCO53_RS24385;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=CCO53_RS24385 NZ_NPLZ01000007.1 Protein Homology CDS 23747 23842 . + 0 ID=cds-WP_223148976.1;Parent=gene-CCO53_RS24385;Dbxref=GenBank:WP_223148976.1;Name=WP_223148976.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=CCO53_RS24385;product=putative translational regulatory protein ArgL;protein_id=WP_223148976.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 23812 24816 . + . ID=gene-CCO53_RS13815;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO53_RS13815;old_locus_tag=CCO53_13795 NZ_NPLZ01000007.1 Protein Homology CDS 23812 24816 . + 0 ID=cds-WP_000103041.1;Parent=gene-CCO53_RS13815;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=CCO53_RS13815;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 24890 25342 . - . ID=gene-CCO53_RS13820;Name=CCO53_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13820;old_locus_tag=CCO53_13800 NZ_NPLZ01000007.1 Protein Homology CDS 24890 25342 . - 0 ID=cds-WP_000583454.1;Parent=gene-CCO53_RS13820;Dbxref=GenBank:WP_000583454.1;Name=WP_000583454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=CCO53_RS13820;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000583454.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 26018 27238 . + . ID=gene-CCO53_RS13835;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO53_RS13835;old_locus_tag=CCO53_13815 NZ_NPLZ01000007.1 Protein Homology CDS 26018 27238 . + 0 ID=cds-WP_080160328.1;Parent=gene-CCO53_RS13835;Dbxref=GenBank:WP_080160328.1;Name=WP_080160328.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=CCO53_RS13835;product=arginine deiminase;protein_id=WP_080160328.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 27249 28181 . + . ID=gene-CCO53_RS13840;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CCO53_RS13840;old_locus_tag=CCO53_13820 NZ_NPLZ01000007.1 Protein Homology CDS 27249 28181 . + 0 ID=cds-WP_000428751.1;Parent=gene-CCO53_RS13840;Dbxref=GenBank:WP_000428751.1;Name=WP_000428751.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=CCO53_RS13840;product=carbamate kinase;protein_id=WP_000428751.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 28187 28269 . - . ID=gene-CCO53_RS24390;Name=CCO53_RS24390;end_range=28269,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24390;partial=true;pseudo=true;start_range=.,28187 NZ_NPLZ01000007.1 Protein Homology CDS 28187 28269 . - 0 ID=cds-CCO53_RS24390;Parent=gene-CCO53_RS24390;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=28269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO53_RS24390;partial=true;product=hypothetical protein;pseudo=true;start_range=.,28187;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 28293 29297 . + . ID=gene-CCO53_RS13845;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO53_RS13845;old_locus_tag=CCO53_13825 NZ_NPLZ01000007.1 Protein Homology CDS 28293 29297 . + 0 ID=cds-WP_000237035.1;Parent=gene-CCO53_RS13845;Dbxref=GenBank:WP_000237035.1;Name=WP_000237035.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=CCO53_RS13845;product=ornithine carbamoyltransferase;protein_id=WP_000237035.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 29353 30756 . + . ID=gene-CCO53_RS13850;Name=CCO53_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13850;old_locus_tag=CCO53_13830 NZ_NPLZ01000007.1 Protein Homology CDS 29353 30756 . + 0 ID=cds-WP_064043995.1;Parent=gene-CCO53_RS13850;Dbxref=GenBank:WP_064043995.1;Name=WP_064043995.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=CCO53_RS13850;product=YfcC family protein;protein_id=WP_064043995.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 30943 31431 . + . ID=gene-CCO53_RS13855;Name=CCO53_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13855;old_locus_tag=CCO53_13835 NZ_NPLZ01000007.1 Protein Homology CDS 30943 31431 . + 0 ID=cds-WP_000666051.1;Parent=gene-CCO53_RS13855;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=CCO53_RS13855;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 31401 31542 . - . ID=gene-CCO53_RS13860;Name=CCO53_RS13860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS13860;old_locus_tag=CCO53_13840;pseudo=true NZ_NPLZ01000007.1 Protein Homology CDS 31401 31542 . - 0 ID=cds-CCO53_RS13860;Parent=gene-CCO53_RS13860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=CCO53_RS13860;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 31522 31623 . + . ID=gene-CCO53_RS13865;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=CCO53_RS13865;old_locus_tag=CCO53_13845 NZ_NPLZ01000007.1 Protein Homology CDS 31522 31623 . + 0 ID=cds-WP_000249504.1;Parent=gene-CCO53_RS13865;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=CCO53_RS13865;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 31659 32594 . + . ID=gene-CCO53_RS13870;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=CCO53_RS13870;old_locus_tag=CCO53_13850 NZ_NPLZ01000007.1 Protein Homology CDS 31659 32594 . + 0 ID=cds-WP_000013055.1;Parent=gene-CCO53_RS13870;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=CCO53_RS13870;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 32607 33068 . + . ID=gene-CCO53_RS13875;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=CCO53_RS13875;old_locus_tag=CCO53_13855 NZ_NPLZ01000007.1 Protein Homology CDS 32607 33068 . + 0 ID=cds-WP_000148570.1;Parent=gene-CCO53_RS13875;Dbxref=GenBank:WP_000148570.1;Name=WP_000148570.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=CCO53_RS13875;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148570.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 33145 33531 . + . ID=gene-CCO53_RS13880;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=CCO53_RS13880;old_locus_tag=CCO53_13860 NZ_NPLZ01000007.1 Protein Homology CDS 33145 33531 . + 0 ID=cds-WP_000047544.1;Parent=gene-CCO53_RS13880;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=CCO53_RS13880;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 33606 34052 . + . ID=gene-CCO53_RS13885;Name=CCO53_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13885;old_locus_tag=CCO53_13865 NZ_NPLZ01000007.1 Protein Homology CDS 33606 34052 . + 0 ID=cds-WP_079982351.1;Parent=gene-CCO53_RS13885;Dbxref=GenBank:WP_079982351.1;Name=WP_079982351.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=CCO53_RS13885;product=transposase;protein_id=WP_079982351.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 34168 36876 . - . ID=gene-CCO53_RS13890;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO53_RS13890;old_locus_tag=CCO53_13870 NZ_NPLZ01000007.1 Protein Homology CDS 34168 36876 . - 0 ID=cds-WP_094887718.1;Parent=gene-CCO53_RS13890;Dbxref=GenBank:WP_094887718.1;Name=WP_094887718.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=CCO53_RS13890;product=magnesium-translocating P-type ATPase;protein_id=WP_094887718.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 37017 37115 . - . ID=gene-CCO53_RS24395;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=CCO53_RS24395 NZ_NPLZ01000007.1 Protein Homology CDS 37017 37115 . - 0 ID=cds-WP_105789234.1;Parent=gene-CCO53_RS24395;Dbxref=GenBank:WP_105789234.1;Name=WP_105789234.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=CCO53_RS24395;product=mgtA regulatory leader peptide MgtL;protein_id=WP_105789234.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 37260 38207 . + . ID=gene-CCO53_RS13895;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CCO53_RS13895;old_locus_tag=CCO53_13875 NZ_NPLZ01000007.1 Protein Homology CDS 37260 38207 . + 0 ID=cds-WP_001181297.1;Parent=gene-CCO53_RS13895;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=CCO53_RS13895;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 38345 39763 . + . ID=gene-CCO53_RS13900;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=CCO53_RS13900;old_locus_tag=CCO53_13880 NZ_NPLZ01000007.1 Protein Homology CDS 38345 39763 . + 0 ID=cds-WP_000048846.1;Parent=gene-CCO53_RS13900;Dbxref=GenBank:WP_000048846.1;Name=WP_000048846.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=CCO53_RS13900;product=PTS trehalose transporter subunit IIBC;protein_id=WP_000048846.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 39813 41465 . + . ID=gene-CCO53_RS13905;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CCO53_RS13905;old_locus_tag=CCO53_13885 NZ_NPLZ01000007.1 Protein Homology CDS 39813 41465 . + 0 ID=cds-WP_094887719.1;Parent=gene-CCO53_RS13905;Dbxref=GenBank:WP_094887719.1;Name=WP_094887719.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=CCO53_RS13905;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_094887719.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 41874 44012 . + . ID=gene-CCO53_RS13910;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CCO53_RS13910;old_locus_tag=CCO53_13890 NZ_NPLZ01000007.1 Protein Homology CDS 41874 44012 . + 0 ID=cds-WP_000187818.1;Parent=gene-CCO53_RS13910;Dbxref=GenBank:WP_000187818.1;Name=WP_000187818.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=CCO53_RS13910;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187818.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 44133 44597 . + . ID=gene-CCO53_RS13915;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CCO53_RS13915;old_locus_tag=CCO53_13895 NZ_NPLZ01000007.1 Protein Homology CDS 44133 44597 . + 0 ID=cds-WP_001268862.1;Parent=gene-CCO53_RS13915;Dbxref=GenBank:WP_001268862.1;Name=WP_001268862.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=CCO53_RS13915;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001268862.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 44601 44885 . - . ID=gene-CCO53_RS13920;Name=CCO53_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13920;old_locus_tag=CCO53_13900 NZ_NPLZ01000007.1 Protein Homology CDS 44601 44885 . - 0 ID=cds-WP_000220577.1;Parent=gene-CCO53_RS13920;Dbxref=GenBank:WP_000220577.1;Name=WP_000220577.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=CCO53_RS13920;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220577.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 44875 45117 . - . ID=gene-CCO53_RS13925;Name=CCO53_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13925;old_locus_tag=CCO53_13905 NZ_NPLZ01000007.1 Protein Homology CDS 44875 45117 . - 0 ID=cds-WP_000212724.1;Parent=gene-CCO53_RS13925;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=CCO53_RS13925;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 45195 47108 . - . ID=gene-CCO53_RS13930;Name=CCO53_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13930;old_locus_tag=CCO53_13910 NZ_NPLZ01000007.1 Protein Homology CDS 45195 47108 . - 0 ID=cds-WP_140427947.1;Parent=gene-CCO53_RS13930;Dbxref=GenBank:WP_140427947.1;Name=WP_140427947.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=CCO53_RS13930;product=BglG family transcription antiterminator;protein_id=WP_140427947.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 47125 47865 . - . ID=gene-CCO53_RS13935;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO53_RS13935;old_locus_tag=CCO53_13915 NZ_NPLZ01000007.1 Protein Homology CDS 47125 47865 . - 0 ID=cds-WP_000779262.1;Parent=gene-CCO53_RS13935;Dbxref=GenBank:WP_000779262.1;Name=WP_000779262.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=CCO53_RS13935;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000779262.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 47862 48980 . - . ID=gene-CCO53_RS13940;Name=CCO53_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13940;old_locus_tag=CCO53_13920 NZ_NPLZ01000007.1 Protein Homology CDS 47862 48980 . - 0 ID=cds-WP_094887720.1;Parent=gene-CCO53_RS13940;Dbxref=GenBank:WP_094887720.1;Name=WP_094887720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=CCO53_RS13940;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_094887720.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 48964 50097 . - . ID=gene-CCO53_RS13945;Name=CCO53_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13945;old_locus_tag=CCO53_13925 NZ_NPLZ01000007.1 Protein Homology CDS 48964 50097 . - 0 ID=cds-WP_000459951.1;Parent=gene-CCO53_RS13945;Dbxref=GenBank:WP_000459951.1;Name=WP_000459951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=CCO53_RS13945;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_000459951.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 50156 50800 . - . ID=gene-CCO53_RS13950;Name=CCO53_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13950;old_locus_tag=CCO53_13930 NZ_NPLZ01000007.1 Protein Homology CDS 50156 50800 . - 0 ID=cds-WP_000392128.1;Parent=gene-CCO53_RS13950;Dbxref=GenBank:WP_000392128.1;Name=WP_000392128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=CCO53_RS13950;product=DUF4310 family protein;protein_id=WP_000392128.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 50812 51588 . - . ID=gene-CCO53_RS13955;Name=CCO53_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13955;old_locus_tag=CCO53_13935 NZ_NPLZ01000007.1 Protein Homology CDS 50812 51588 . - 0 ID=cds-WP_000478578.1;Parent=gene-CCO53_RS13955;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=CCO53_RS13955;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 51611 51913 . - . ID=gene-CCO53_RS13960;Name=CCO53_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13960;old_locus_tag=CCO53_13940 NZ_NPLZ01000007.1 Protein Homology CDS 51611 51913 . - 0 ID=cds-WP_000975187.1;Parent=gene-CCO53_RS13960;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=CCO53_RS13960;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 51913 52275 . - . ID=gene-CCO53_RS13965;Name=CCO53_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13965;old_locus_tag=CCO53_13945 NZ_NPLZ01000007.1 Protein Homology CDS 51913 52275 . - 0 ID=cds-WP_000435389.1;Parent=gene-CCO53_RS13965;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=CCO53_RS13965;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 52286 52624 . - . ID=gene-CCO53_RS13970;Name=CCO53_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS13970;old_locus_tag=CCO53_13950 NZ_NPLZ01000007.1 Protein Homology CDS 52286 52624 . - 0 ID=cds-WP_001255103.1;Parent=gene-CCO53_RS13970;Dbxref=GenBank:WP_001255103.1;Name=WP_001255103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=CCO53_RS13970;product=glycine dehydrogenase;protein_id=WP_001255103.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 52902 53288 . - . ID=gene-CCO53_RS13975;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=CCO53_RS13975;old_locus_tag=CCO53_13955 NZ_NPLZ01000007.1 Protein Homology CDS 52902 53288 . - 0 ID=cds-WP_001232230.1;Parent=gene-CCO53_RS13975;Dbxref=GenBank:WP_001232230.1;Name=WP_001232230.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=CCO53_RS13975;product=cytochrome b562;protein_id=WP_001232230.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 53387 54739 . - . ID=gene-CCO53_RS13980;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=CCO53_RS13980;old_locus_tag=CCO53_13960 NZ_NPLZ01000007.1 Protein Homology CDS 53387 54739 . - 0 ID=cds-WP_094887721.1;Parent=gene-CCO53_RS13980;Dbxref=GenBank:WP_094887721.1;Name=WP_094887721.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=CCO53_RS13980;product=metalloprotease PmbA;protein_id=WP_094887721.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 54835 55386 . + . ID=gene-CCO53_RS13985;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=CCO53_RS13985;old_locus_tag=CCO53_13965 NZ_NPLZ01000007.1 Protein Homology CDS 54835 55386 . + 0 ID=cds-WP_000166287.1;Parent=gene-CCO53_RS13985;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=CCO53_RS13985;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 55493 56866 . - . ID=gene-CCO53_RS13990;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=CCO53_RS13990;old_locus_tag=CCO53_13970 NZ_NPLZ01000007.1 Protein Homology CDS 55493 56866 . - 0 ID=cds-WP_094882484.1;Parent=gene-CCO53_RS13990;Dbxref=GenBank:WP_094882484.1;Name=WP_094882484.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=CCO53_RS13990;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_094882484.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 57041 58039 . + . ID=gene-CCO53_RS13995;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=CCO53_RS13995;old_locus_tag=CCO53_13975 NZ_NPLZ01000007.1 Protein Homology CDS 57041 58039 . + 0 ID=cds-WP_000853764.1;Parent=gene-CCO53_RS13995;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=CCO53_RS13995;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 58266 58796 . + . ID=gene-CCO53_RS14000;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=CCO53_RS14000;old_locus_tag=CCO53_13980 NZ_NPLZ01000007.1 Protein Homology CDS 58266 58796 . + 0 ID=cds-WP_000055079.1;Parent=gene-CCO53_RS14000;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=CCO53_RS14000;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 59206 60369 . + . ID=gene-CCO53_RS14005;Name=CCO53_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14005;old_locus_tag=CCO53_13985 NZ_NPLZ01000007.1 Protein Homology CDS 59206 60369 . + 0 ID=cds-WP_000977207.1;Parent=gene-CCO53_RS14005;Dbxref=GenBank:WP_000977207.1;Name=WP_000977207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=CCO53_RS14005;product=metallo-dependent hydrolase;protein_id=WP_000977207.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 60366 61574 . + . ID=gene-CCO53_RS14010;Name=CCO53_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14010;old_locus_tag=CCO53_13990 NZ_NPLZ01000007.1 Protein Homology CDS 60366 61574 . + 0 ID=cds-WP_000203131.1;Parent=gene-CCO53_RS14010;Dbxref=GenBank:WP_000203131.1;Name=WP_000203131.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=CCO53_RS14010;product=MFS transporter;protein_id=WP_000203131.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 61628 61972 . - . ID=gene-CCO53_RS14015;Name=CCO53_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14015;old_locus_tag=CCO53_13995 NZ_NPLZ01000007.1 Protein Homology CDS 61628 61972 . - 0 ID=cds-WP_001219167.1;Parent=gene-CCO53_RS14015;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=CCO53_RS14015;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 61975 65754 . - . ID=gene-CCO53_RS14020;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=CCO53_RS14020;old_locus_tag=CCO53_14000 NZ_NPLZ01000007.1 Protein Homology CDS 61975 65754 . - 0 ID=cds-WP_000060817.1;Parent=gene-CCO53_RS14020;Dbxref=GenBank:WP_000060817.1;Name=WP_000060817.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=CCO53_RS14020;product=autotransporter assembly complex protein TamB;protein_id=WP_000060817.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 65751 67484 . - . ID=gene-CCO53_RS14025;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=CCO53_RS14025;old_locus_tag=CCO53_14005 NZ_NPLZ01000007.1 Protein Homology CDS 65751 67484 . - 0 ID=cds-WP_001120230.1;Parent=gene-CCO53_RS14025;Dbxref=GenBank:WP_001120230.1;Name=WP_001120230.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=CCO53_RS14025;product=autotransporter assembly complex protein TamA;protein_id=WP_001120230.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 67697 68335 . + . ID=gene-CCO53_RS14030;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CCO53_RS14030;old_locus_tag=CCO53_14010 NZ_NPLZ01000007.1 Protein Homology CDS 67697 68335 . + 0 ID=cds-WP_094887722.1;Parent=gene-CCO53_RS14030;Dbxref=GenBank:WP_094887722.1;Name=WP_094887722.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=CCO53_RS14030;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_094887722.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 68518 69861 . + . ID=gene-CCO53_RS14035;Name=CCO53_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14035;old_locus_tag=CCO53_14015 NZ_NPLZ01000007.1 Protein Homology CDS 68518 69861 . + 0 ID=cds-WP_000934974.1;Parent=gene-CCO53_RS14035;Dbxref=GenBank:WP_000934974.1;Name=WP_000934974.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=CCO53_RS14035;product=hemolysin family protein;protein_id=WP_000934974.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 69946 70152 . - . ID=gene-CCO53_RS14040;Name=CCO53_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14040;old_locus_tag=CCO53_14020 NZ_NPLZ01000007.1 Protein Homology CDS 69946 70152 . - 0 ID=cds-WP_000689229.1;Parent=gene-CCO53_RS14040;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=CCO53_RS14040;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 70479 71036 . + . ID=gene-CCO53_RS14050;Name=CCO53_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14050;old_locus_tag=CCO53_14030 NZ_NPLZ01000007.1 Protein Homology CDS 70479 71036 . + 0 ID=cds-WP_000175302.1;Parent=gene-CCO53_RS14050;Dbxref=GenBank:WP_000175302.1;Name=WP_000175302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=CCO53_RS14050;product=YtfJ family protein;protein_id=WP_000175302.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 71026 71766 . - . ID=gene-CCO53_RS14055;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=CCO53_RS14055;old_locus_tag=CCO53_14035 NZ_NPLZ01000007.1 Protein Homology CDS 71026 71766 . - 0 ID=cds-WP_000893398.1;Parent=gene-CCO53_RS14055;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=CCO53_RS14055;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 72034 73977 . + . ID=gene-CCO53_RS14065;Name=CCO53_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14065;old_locus_tag=CCO53_14045 NZ_NPLZ01000007.1 Protein Homology CDS 72034 73977 . + 0 ID=cds-WP_094887723.1;Parent=gene-CCO53_RS14065;Dbxref=GenBank:WP_094887723.1;Name=WP_094887723.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=CCO53_RS14065;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_094887723.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 74035 74421 . - . ID=gene-CCO53_RS14070;Name=CCO53_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14070;old_locus_tag=CCO53_14050 NZ_NPLZ01000007.1 Protein Homology CDS 74035 74421 . - 0 ID=cds-WP_001201297.1;Parent=gene-CCO53_RS14070;Dbxref=GenBank:WP_001201297.1;Name=WP_001201297.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=CCO53_RS14070;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201297.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 74509 75357 . + . ID=gene-CCO53_RS14075;Name=CCO53_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14075;old_locus_tag=CCO53_14055 NZ_NPLZ01000007.1 Protein Homology CDS 74509 75357 . + 0 ID=cds-WP_094887724.1;Parent=gene-CCO53_RS14075;Dbxref=GenBank:WP_094887724.1;Name=WP_094887724.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=CCO53_RS14075;product=SDR family oxidoreductase;protein_id=WP_094887724.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 75438 76403 . + . ID=gene-CCO53_RS14080;Name=CCO53_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14080;old_locus_tag=CCO53_14060 NZ_NPLZ01000007.1 Protein Homology CDS 75438 76403 . + 0 ID=cds-WP_000623290.1;Parent=gene-CCO53_RS14080;Dbxref=GenBank:WP_000623290.1;Name=WP_000623290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=CCO53_RS14080;product=DMT family transporter;protein_id=WP_000623290.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 76506 77168 . + . ID=gene-CCO53_RS14085;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=CCO53_RS14085;old_locus_tag=CCO53_14065 NZ_NPLZ01000007.1 Protein Homology CDS 76506 77168 . + 0 ID=cds-WP_000331471.1;Parent=gene-CCO53_RS14085;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=CCO53_RS14085;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 77280 78689 . - . ID=gene-CCO53_RS14090;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=CCO53_RS14090;old_locus_tag=CCO53_14070 NZ_NPLZ01000007.1 Protein Homology CDS 77280 78689 . - 0 ID=cds-WP_023217940.1;Parent=gene-CCO53_RS14090;Dbxref=GenBank:WP_023217940.1;Name=WP_023217940.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=CCO53_RS14090;product=D-serine/D-alanine/glycine transporter;protein_id=WP_023217940.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 78985 79605 . - . ID=gene-CCO53_RS14095;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=CCO53_RS14095;old_locus_tag=CCO53_14075 NZ_NPLZ01000007.1 Protein Homology CDS 78985 79605 . - 0 ID=cds-WP_000235161.1;Parent=gene-CCO53_RS14095;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=CCO53_RS14095;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 79825 80460 . + . ID=gene-CCO53_RS14105;Name=CCO53_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14105;old_locus_tag=CCO53_14085 NZ_NPLZ01000007.1 Protein Homology CDS 79825 80460 . + 0 ID=cds-WP_001119446.1;Parent=gene-CCO53_RS14105;Dbxref=GenBank:WP_001119446.1;Name=WP_001119446.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=CCO53_RS14105;product=OapA family protein;protein_id=WP_001119446.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 80511 81437 . - . ID=gene-CCO53_RS14110;Name=CCO53_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14110;old_locus_tag=CCO53_14090 NZ_NPLZ01000007.1 Protein Homology CDS 80511 81437 . - 0 ID=cds-WP_080207808.1;Parent=gene-CCO53_RS14110;Dbxref=GenBank:WP_080207808.1;Name=WP_080207808.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=CCO53_RS14110;product=DMT family transporter;protein_id=WP_080207808.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 81585 82034 . - . ID=gene-CCO53_RS14115;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CCO53_RS14115;old_locus_tag=CCO53_14095 NZ_NPLZ01000007.1 Protein Homology CDS 81585 82034 . - 0 ID=cds-WP_001196065.1;Parent=gene-CCO53_RS14115;Dbxref=GenBank:WP_001196065.1;Name=WP_001196065.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=CCO53_RS14115;product=50S ribosomal protein L9;protein_id=WP_001196065.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 82076 82303 . - . ID=gene-CCO53_RS14120;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CCO53_RS14120;old_locus_tag=CCO53_14100 NZ_NPLZ01000007.1 Protein Homology CDS 82076 82303 . - 0 ID=cds-WP_000135199.1;Parent=gene-CCO53_RS14120;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=CCO53_RS14120;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 82308 82622 . - . ID=gene-CCO53_RS14125;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=CCO53_RS14125;old_locus_tag=CCO53_14105 NZ_NPLZ01000007.1 Protein Homology CDS 82308 82622 . - 0 ID=cds-WP_001519453.1;Parent=gene-CCO53_RS14125;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=CCO53_RS14125;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 82629 83024 . - . ID=gene-CCO53_RS14130;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CCO53_RS14130;old_locus_tag=CCO53_14110 NZ_NPLZ01000007.1 Protein Homology CDS 82629 83024 . - 0 ID=cds-WP_001216673.1;Parent=gene-CCO53_RS14130;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=CCO53_RS14130;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 83411 83686 . + . ID=gene-CCO53_RS14140;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=CCO53_RS14140;old_locus_tag=CCO53_14120 NZ_NPLZ01000007.1 Protein Homology CDS 83411 83686 . + 0 ID=cds-WP_000466074.1;Parent=gene-CCO53_RS14140;Dbxref=GenBank:WP_000466074.1;Name=WP_000466074.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=CCO53_RS14140;product=DUF1471 family protein YjfY;protein_id=WP_000466074.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 83740 84297 . - . ID=gene-CCO53_RS14145;Name=CCO53_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14145;old_locus_tag=CCO53_14125 NZ_NPLZ01000007.1 Protein Homology CDS 83740 84297 . - 0 ID=cds-WP_000026294.1;Parent=gene-CCO53_RS14145;Dbxref=GenBank:WP_000026294.1;Name=WP_000026294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=CCO53_RS14145;product=YagU family protein;protein_id=WP_000026294.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 84385 85071 . - . ID=gene-CCO53_RS14150;Name=CCO53_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14150;old_locus_tag=CCO53_14130 NZ_NPLZ01000007.1 Protein Homology CDS 84385 85071 . - 0 ID=cds-WP_001170767.1;Parent=gene-CCO53_RS14150;Dbxref=GenBank:WP_001170767.1;Name=WP_001170767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=CCO53_RS14150;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170767.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 85071 85925 . - . ID=gene-CCO53_RS14155;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=CCO53_RS14155;old_locus_tag=CCO53_14135 NZ_NPLZ01000007.1 Protein Homology CDS 85071 85925 . - 0 ID=cds-WP_000949530.1;Parent=gene-CCO53_RS14155;Dbxref=GenBank:WP_000949530.1;Name=WP_000949530.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=CCO53_RS14155;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949530.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 85935 86585 . - . ID=gene-CCO53_RS14160;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO53_RS14160;old_locus_tag=CCO53_14140 NZ_NPLZ01000007.1 Protein Homology CDS 85935 86585 . - 0 ID=cds-WP_000056761.1;Parent=gene-CCO53_RS14160;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=CCO53_RS14160;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 86599 87063 . - . ID=gene-CCO53_RS14165;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=CCO53_RS14165;old_locus_tag=CCO53_14145 NZ_NPLZ01000007.1 Protein Homology CDS 86599 87063 . - 0 ID=cds-WP_000776531.1;Parent=gene-CCO53_RS14165;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=CCO53_RS14165;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 87073 87378 . - . ID=gene-CCO53_RS14170;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=CCO53_RS14170;old_locus_tag=CCO53_14150 NZ_NPLZ01000007.1 Protein Homology CDS 87073 87378 . - 0 ID=cds-WP_000218358.1;Parent=gene-CCO53_RS14170;Dbxref=GenBank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=CCO53_RS14170;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 87394 88791 . - . ID=gene-CCO53_RS14175;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=CCO53_RS14175;old_locus_tag=CCO53_14155 NZ_NPLZ01000007.1 Protein Homology CDS 87394 88791 . - 0 ID=cds-WP_000404873.1;Parent=gene-CCO53_RS14175;Dbxref=GenBank:WP_000404873.1;Name=WP_000404873.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=CCO53_RS14175;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404873.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 89154 90218 . + . ID=gene-CCO53_RS14180;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CCO53_RS14180;old_locus_tag=CCO53_14160 NZ_NPLZ01000007.1 Protein Homology CDS 89154 90218 . + 0 ID=cds-WP_000049161.1;Parent=gene-CCO53_RS14180;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=CCO53_RS14180;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 90323 91078 . + . ID=gene-CCO53_RS14185;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=CCO53_RS14185;old_locus_tag=CCO53_14165 NZ_NPLZ01000007.1 Protein Homology CDS 90323 91078 . + 0 ID=cds-WP_000133620.1;Parent=gene-CCO53_RS14185;Dbxref=GenBank:WP_000133620.1;Name=WP_000133620.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=CCO53_RS14185;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133620.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 91075 91824 . - . ID=gene-CCO53_RS14190;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=CCO53_RS14190;old_locus_tag=CCO53_14170 NZ_NPLZ01000007.1 Protein Homology CDS 91075 91824 . - 0 ID=cds-WP_080160340.1;Parent=gene-CCO53_RS14190;Dbxref=GenBank:WP_080160340.1;Name=WP_080160340.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=CCO53_RS14190;product=esterase;protein_id=WP_080160340.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 92008 92337 . + . ID=gene-CCO53_RS14195;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=CCO53_RS14195;old_locus_tag=CCO53_14175 NZ_NPLZ01000007.1 Protein Homology CDS 92008 92337 . + 0 ID=cds-WP_000586836.1;Parent=gene-CCO53_RS14195;Dbxref=GenBank:WP_000586836.1;Name=WP_000586836.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=CCO53_RS14195;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586836.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 92468 92743 . + . ID=gene-CCO53_RS14200;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=CCO53_RS14200;old_locus_tag=CCO53_14180 NZ_NPLZ01000007.1 Protein Homology CDS 92468 92743 . + 0 ID=cds-WP_001518964.1;Parent=gene-CCO53_RS14200;Dbxref=GenBank:WP_001518964.1;Name=WP_001518964.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=CCO53_RS14200;product=DUF1471 family protease activator YjfN;protein_id=WP_001518964.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 92788 94410 . - . ID=gene-CCO53_RS14205;Name=CCO53_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14205;old_locus_tag=CCO53_14185 NZ_NPLZ01000007.1 Protein Homology CDS 92788 94410 . - 0 ID=cds-WP_023254405.1;Parent=gene-CCO53_RS14205;Dbxref=GenBank:WP_023254405.1;Name=WP_023254405.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=CCO53_RS14205;product=isovaleryl-CoA dehydrogenase;protein_id=WP_023254405.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 94495 95658 . - . ID=gene-CCO53_RS14210;Name=CCO53_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14210;old_locus_tag=CCO53_14190 NZ_NPLZ01000007.1 Protein Homology CDS 94495 95658 . - 0 ID=cds-WP_000943930.1;Parent=gene-CCO53_RS14210;Dbxref=GenBank:WP_000943930.1;Name=WP_000943930.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=CCO53_RS14210;product=glutathionylspermidine synthase family protein;protein_id=WP_000943930.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 95661 96299 . - . ID=gene-CCO53_RS14215;Name=CCO53_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14215;old_locus_tag=CCO53_14195 NZ_NPLZ01000007.1 Protein Homology CDS 95661 96299 . - 0 ID=cds-WP_001085605.1;Parent=gene-CCO53_RS14215;Dbxref=GenBank:WP_001085605.1;Name=WP_001085605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=CCO53_RS14215;product=DUF1190 domain-containing protein;protein_id=WP_001085605.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 96309 96707 . - . ID=gene-CCO53_RS14220;Name=CCO53_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14220;old_locus_tag=CCO53_14200 NZ_NPLZ01000007.1 Protein Homology CDS 96309 96707 . - 0 ID=cds-WP_000547738.1;Parent=gene-CCO53_RS14220;Dbxref=GenBank:WP_000547738.1;Name=WP_000547738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=CCO53_RS14220;product=DUF350 domain-containing protein;protein_id=WP_000547738.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 96725 97408 . - . ID=gene-CCO53_RS14225;Name=CCO53_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14225;old_locus_tag=CCO53_14205 NZ_NPLZ01000007.1 Protein Homology CDS 96725 97408 . - 0 ID=cds-WP_080207807.1;Parent=gene-CCO53_RS14225;Dbxref=GenBank:WP_080207807.1;Name=WP_080207807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=CCO53_RS14225;product=YjfK family protein;protein_id=WP_080207807.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 97531 97632 . - . ID=gene-CCO53_RS24060;Name=CCO53_RS24060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24060;partial=true;pseudo=true;start_range=.,97531 NZ_NPLZ01000007.1 Protein Homology CDS 97531 97632 . - 0 ID=cds-CCO53_RS24060;Parent=gene-CCO53_RS24060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=CCO53_RS24060;partial=true;product=hypothetical protein;pseudo=true;start_range=.,97531;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 97632 98330 . - . ID=gene-CCO53_RS14230;Name=CCO53_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14230;old_locus_tag=CCO53_14210 NZ_NPLZ01000007.1 Protein Homology CDS 97632 98330 . - 0 ID=cds-WP_000511981.1;Parent=gene-CCO53_RS14230;Dbxref=GenBank:WP_000511981.1;Name=WP_000511981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=CCO53_RS14230;product=PspA/IM30 family protein;protein_id=WP_000511981.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 98345 98749 . - . ID=gene-CCO53_RS14235;Name=CCO53_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14235;old_locus_tag=CCO53_14215 NZ_NPLZ01000007.1 Protein Homology CDS 98345 98749 . - 0 ID=cds-WP_000312605.1;Parent=gene-CCO53_RS14235;Dbxref=GenBank:WP_000312605.1;Name=WP_000312605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=CCO53_RS14235;product=YjfI family protein;protein_id=WP_000312605.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 98881 99612 . - . ID=gene-CCO53_RS14240;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CCO53_RS14240;old_locus_tag=CCO53_14220 NZ_NPLZ01000007.1 Protein Homology CDS 98881 99612 . - 0 ID=cds-WP_001293274.1;Parent=gene-CCO53_RS14240;Dbxref=GenBank:WP_001293274.1;Name=WP_001293274.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=CCO53_RS14240;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293274.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 99703 102141 . - . ID=gene-CCO53_RS14245;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CCO53_RS14245;old_locus_tag=CCO53_14225 NZ_NPLZ01000007.1 Protein Homology CDS 99703 102141 . - 0 ID=cds-WP_094887725.1;Parent=gene-CCO53_RS14245;Dbxref=GenBank:WP_094887725.1;Name=WP_094887725.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=CCO53_RS14245;product=ribonuclease R;protein_id=WP_094887725.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 102179 102604 . - . ID=gene-CCO53_RS14250;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=CCO53_RS14250;old_locus_tag=CCO53_14230 NZ_NPLZ01000007.1 Protein Homology CDS 102179 102604 . - 0 ID=cds-WP_001177632.1;Parent=gene-CCO53_RS14250;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=CCO53_RS14250;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 102824 104122 . - . ID=gene-CCO53_RS14260;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=CCO53_RS14260;old_locus_tag=CCO53_14240 NZ_NPLZ01000007.1 Protein Homology CDS 102824 104122 . - 0 ID=cds-WP_000527965.1;Parent=gene-CCO53_RS14260;Dbxref=GenBank:WP_000527965.1;Name=WP_000527965.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=CCO53_RS14260;product=adenylosuccinate synthase;protein_id=WP_000527965.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 104225 104422 . - . ID=gene-CCO53_RS14265;Name=CCO53_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14265;old_locus_tag=CCO53_14245 NZ_NPLZ01000007.1 Protein Homology CDS 104225 104422 . - 0 ID=cds-WP_001089290.1;Parent=gene-CCO53_RS14265;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=CCO53_RS14265;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 104501 105505 . - . ID=gene-CCO53_RS14270;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=CCO53_RS14270;old_locus_tag=CCO53_14250 NZ_NPLZ01000007.1 Protein Homology CDS 104501 105505 . - 0 ID=cds-WP_001232417.1;Parent=gene-CCO53_RS14270;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=CCO53_RS14270;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 105508 106767 . - . ID=gene-CCO53_RS14275;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=CCO53_RS14275;old_locus_tag=CCO53_14255 NZ_NPLZ01000007.1 Protein Homology CDS 105508 106767 . - 0 ID=cds-WP_094887726.1;Parent=gene-CCO53_RS14275;Dbxref=GenBank:WP_094887726.1;Name=WP_094887726.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=CCO53_RS14275;product=FtsH protease activity modulator HflK;protein_id=WP_094887726.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 106982 108262 . - . ID=gene-CCO53_RS14280;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CCO53_RS14280;old_locus_tag=CCO53_14260 NZ_NPLZ01000007.1 Protein Homology CDS 106982 108262 . - 0 ID=cds-WP_000460338.1;Parent=gene-CCO53_RS14280;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=CCO53_RS14280;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 108334 108642 . - . ID=gene-CCO53_RS14285;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CCO53_RS14285;old_locus_tag=CCO53_14265 NZ_NPLZ01000007.1 Protein Homology CDS 108334 108642 . - 0 ID=cds-WP_001051875.1;Parent=gene-CCO53_RS14285;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=CCO53_RS14285;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 108725 109675 . - . ID=gene-CCO53_RS14290;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CCO53_RS14290;old_locus_tag=CCO53_14270 NZ_NPLZ01000007.1 Protein Homology CDS 108725 109675 . - 0 ID=cds-WP_001000734.1;Parent=gene-CCO53_RS14290;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=CCO53_RS14290;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 109668 111524 . - . ID=gene-CCO53_RS14295;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CCO53_RS14295;old_locus_tag=CCO53_14275 NZ_NPLZ01000007.1 Protein Homology CDS 109668 111524 . - 0 ID=cds-WP_094887727.1;Parent=gene-CCO53_RS14295;Dbxref=GenBank:WP_094887727.1;Name=WP_094887727.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=CCO53_RS14295;product=DNA mismatch repair endonuclease MutL;protein_id=WP_094887727.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 111534 112853 . - . ID=gene-CCO53_RS14300;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=CCO53_RS14300;old_locus_tag=CCO53_14280 NZ_NPLZ01000007.1 Protein Homology CDS 111534 112853 . - 0 ID=cds-WP_000640362.1;Parent=gene-CCO53_RS14300;Dbxref=GenBank:WP_000640362.1;Name=WP_000640362.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=CCO53_RS14300;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640362.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 112870 113331 . - . ID=gene-CCO53_RS14305;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CCO53_RS14305;old_locus_tag=CCO53_14285 NZ_NPLZ01000007.1 Protein Homology CDS 112870 113331 . - 0 ID=cds-WP_000981990.1;Parent=gene-CCO53_RS14305;Dbxref=GenBank:WP_000981990.1;Name=WP_000981990.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=CCO53_RS14305;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981990.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 113303 114850 . - . ID=gene-CCO53_RS14310;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=CCO53_RS14310;old_locus_tag=CCO53_14290 NZ_NPLZ01000007.1 Protein Homology CDS 113303 114850 . - 0 ID=cds-WP_000968675.1;Parent=gene-CCO53_RS14310;Dbxref=GenBank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=CCO53_RS14310;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 114849 115988 . + . ID=gene-CCO53_RS14315;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CCO53_RS14315;old_locus_tag=CCO53_14295 NZ_NPLZ01000007.1 Protein Homology CDS 114849 115988 . + 0 ID=cds-WP_001615111.1;Parent=gene-CCO53_RS14315;Dbxref=GenBank:WP_001615111.1;Name=WP_001615111.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=CCO53_RS14315;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001615111.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 116258 116333 . - . ID=gene-CCO53_RS14320;Name=CCO53_RS14320;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS14320;old_locus_tag=CCO53_14300 NZ_NPLZ01000007.1 tRNAscan-SE tRNA 116258 116333 . - . ID=rna-CCO53_RS14320;Parent=gene-CCO53_RS14320;anticodon=(pos:complement(116298..116300));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS14320;product=tRNA-Gly NZ_NPLZ01000007.1 tRNAscan-SE exon 116258 116333 . - . ID=exon-CCO53_RS14320-1;Parent=rna-CCO53_RS14320;anticodon=(pos:complement(116298..116300));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS14320;product=tRNA-Gly NZ_NPLZ01000007.1 RefSeq gene 116490 116565 . - . ID=gene-CCO53_RS14325;Name=CCO53_RS14325;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS14325;old_locus_tag=CCO53_14305 NZ_NPLZ01000007.1 tRNAscan-SE tRNA 116490 116565 . - . ID=rna-CCO53_RS14325;Parent=gene-CCO53_RS14325;anticodon=(pos:complement(116530..116532));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS14325;product=tRNA-Gly NZ_NPLZ01000007.1 tRNAscan-SE exon 116490 116565 . - . ID=exon-CCO53_RS14325-1;Parent=rna-CCO53_RS14325;anticodon=(pos:complement(116530..116532));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS14325;product=tRNA-Gly NZ_NPLZ01000007.1 RefSeq gene 116722 116797 . - . ID=gene-CCO53_RS14330;Name=CCO53_RS14330;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS14330;old_locus_tag=CCO53_14310 NZ_NPLZ01000007.1 tRNAscan-SE tRNA 116722 116797 . - . ID=rna-CCO53_RS14330;Parent=gene-CCO53_RS14330;anticodon=(pos:complement(116762..116764));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS14330;product=tRNA-Gly NZ_NPLZ01000007.1 tRNAscan-SE exon 116722 116797 . - . ID=exon-CCO53_RS14330-1;Parent=rna-CCO53_RS14330;anticodon=(pos:complement(116762..116764));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS14330;product=tRNA-Gly NZ_NPLZ01000007.1 RefSeq gene 117073 117813 . + . ID=gene-CCO53_RS14335;Name=CCO53_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14335;old_locus_tag=CCO53_14315 NZ_NPLZ01000007.1 Protein Homology CDS 117073 117813 . + 0 ID=cds-WP_000727897.1;Parent=gene-CCO53_RS14335;Dbxref=GenBank:WP_000727897.1;Name=WP_000727897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=CCO53_RS14335;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727897.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 117875 118420 . - . ID=gene-CCO53_RS14340;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=CCO53_RS14340;old_locus_tag=CCO53_14320 NZ_NPLZ01000007.1 Protein Homology CDS 117875 118420 . - 0 ID=cds-WP_001271546.1;Parent=gene-CCO53_RS14340;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=CCO53_RS14340;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 118527 119579 . + . ID=gene-CCO53_RS14345;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CCO53_RS14345;old_locus_tag=CCO53_14325 NZ_NPLZ01000007.1 Protein Homology CDS 118527 119579 . + 0 ID=cds-WP_023217926.1;Parent=gene-CCO53_RS14345;Dbxref=GenBank:WP_023217926.1;Name=WP_023217926.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=CCO53_RS14345;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_023217926.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 119671 120639 . + . ID=gene-CCO53_RS14350;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO53_RS14350;old_locus_tag=CCO53_14330 NZ_NPLZ01000007.1 Protein Homology CDS 119671 120639 . + 0 ID=cds-WP_000934951.1;Parent=gene-CCO53_RS14350;Dbxref=GenBank:WP_000934951.1;Name=WP_000934951.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=CCO53_RS14350;product=archaetidylserine decarboxylase;protein_id=WP_000934951.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 120658 123984 . + . ID=gene-CCO53_RS14355;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=CCO53_RS14355;old_locus_tag=CCO53_14335 NZ_NPLZ01000007.1 Protein Homology CDS 120658 123984 . + 0 ID=cds-WP_001236755.1;Parent=gene-CCO53_RS14355;Dbxref=GenBank:WP_001236755.1;Name=WP_001236755.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=CCO53_RS14355;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236755.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 124121 124441 . - . ID=gene-CCO53_RS14360;Name=CCO53_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14360;old_locus_tag=CCO53_14340 NZ_NPLZ01000007.1 Protein Homology CDS 124121 124441 . - 0 ID=cds-WP_001736544.1;Parent=gene-CCO53_RS14360;Dbxref=GenBank:WP_001736544.1;Name=WP_001736544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=CCO53_RS14360;product=hypothetical protein;protein_id=WP_001736544.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 124506 126008 . - . ID=gene-CCO53_RS14365;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=CCO53_RS14365;old_locus_tag=CCO53_14345 NZ_NPLZ01000007.1 Protein Homology CDS 124506 126008 . - 0 ID=cds-WP_000149872.1;Parent=gene-CCO53_RS14365;Dbxref=GenBank:WP_000149872.1;Name=WP_000149872.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=CCO53_RS14365;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149872.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 126234 127211 . - . ID=gene-CCO53_RS14370;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=CCO53_RS14370;old_locus_tag=CCO53_14350 NZ_NPLZ01000007.1 Protein Homology CDS 126234 127211 . - 0 ID=cds-WP_023242530.1;Parent=gene-CCO53_RS14370;Dbxref=GenBank:WP_023242530.1;Name=WP_023242530.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=CCO53_RS14370;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_023242530.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 127534 129324 . + . ID=gene-CCO53_RS14375;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=CCO53_RS14375;old_locus_tag=CCO53_14355 NZ_NPLZ01000007.1 Protein Homology CDS 127534 129324 . + 0 ID=cds-WP_001192954.1;Parent=gene-CCO53_RS14375;Dbxref=GenBank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=CCO53_RS14375;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 129317 130051 . + . ID=gene-CCO53_RS14380;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=CCO53_RS14380;old_locus_tag=CCO53_14360 NZ_NPLZ01000007.1 Protein Homology CDS 129317 130051 . + 0 ID=cds-WP_000829509.1;Parent=gene-CCO53_RS14380;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=CCO53_RS14380;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 130062 130457 . + . ID=gene-CCO53_RS14385;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=CCO53_RS14385;old_locus_tag=CCO53_14365 NZ_NPLZ01000007.1 Protein Homology CDS 130062 130457 . + 0 ID=cds-WP_000208749.1;Parent=gene-CCO53_RS14385;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=CCO53_RS14385;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 130468 130827 . + . ID=gene-CCO53_RS14390;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=CCO53_RS14390;old_locus_tag=CCO53_14370 NZ_NPLZ01000007.1 Protein Homology CDS 130468 130827 . + 0 ID=cds-WP_000609648.1;Parent=gene-CCO53_RS14390;Dbxref=GenBank:WP_000609648.1;Name=WP_000609648.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=CCO53_RS14390;product=fumarate reductase subunit FrdD;protein_id=WP_000609648.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 130938 131471 . + . ID=gene-CCO53_RS14395;Name=CCO53_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14395;old_locus_tag=CCO53_14375 NZ_NPLZ01000007.1 Protein Homology CDS 130938 131471 . + 0 ID=cds-WP_001221670.1;Parent=gene-CCO53_RS14395;Dbxref=GenBank:WP_001221670.1;Name=WP_001221670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=CCO53_RS14395;product=lipocalin family protein;protein_id=WP_001221670.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 131488 131805 . - . ID=gene-CCO53_RS14400;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=CCO53_RS14400;old_locus_tag=CCO53_14380 NZ_NPLZ01000007.1 Protein Homology CDS 131488 131805 . - 0 ID=cds-WP_000118469.1;Parent=gene-CCO53_RS14400;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=CCO53_RS14400;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 132062 132649 . + . ID=gene-CCO53_RS14405;Name=CCO53_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14405;old_locus_tag=CCO53_14385 NZ_NPLZ01000007.1 Protein Homology CDS 132062 132649 . + 0 ID=cds-WP_000912959.1;Parent=gene-CCO53_RS14405;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=CCO53_RS14405;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 132680 132826 . - . ID=gene-CCO53_RS14410;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=CCO53_RS14410;old_locus_tag=CCO53_14390 NZ_NPLZ01000007.1 Protein Homology CDS 132680 132826 . - 0 ID=cds-WP_000239598.1;Parent=gene-CCO53_RS14410;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=CCO53_RS14410;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 132934 133068 . - . ID=gene-CCO53_RS14415;Name=CCO53_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14415;old_locus_tag=CCO53_14395 NZ_NPLZ01000007.1 Protein Homology CDS 132934 133068 . - 0 ID=cds-WP_000977687.1;Parent=gene-CCO53_RS14415;Dbxref=GenBank:WP_000977687.1;Name=WP_000977687.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=CCO53_RS14415;product=entericidin A/B family lipoprotein;protein_id=WP_000977687.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 133129 133695 . - . ID=gene-CCO53_RS14420;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CCO53_RS14420;old_locus_tag=CCO53_14400 NZ_NPLZ01000007.1 Protein Homology CDS 133129 133695 . - 0 ID=cds-WP_000257282.1;Parent=gene-CCO53_RS14420;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=CCO53_RS14420;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 133736 134764 . + . ID=gene-CCO53_RS14425;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=CCO53_RS14425;old_locus_tag=CCO53_14405 NZ_NPLZ01000007.1 Protein Homology CDS 133736 134764 . + 0 ID=cds-WP_000940484.1;Parent=gene-CCO53_RS14425;Dbxref=GenBank:WP_000940484.1;Name=WP_000940484.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=CCO53_RS14425;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940484.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 135046 135903 . + . ID=gene-CCO53_RS14430;Name=CCO53_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14430;old_locus_tag=CCO53_14410 NZ_NPLZ01000007.1 Protein Homology CDS 135046 135903 . + 0 ID=cds-WP_001229232.1;Parent=gene-CCO53_RS14430;Dbxref=GenBank:WP_001229232.1;Name=WP_001229232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=CCO53_RS14430;product=YjeJ family protein;protein_id=WP_001229232.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 135951 136304 . - . ID=gene-CCO53_RS14435;Name=CCO53_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14435;old_locus_tag=CCO53_14415 NZ_NPLZ01000007.1 Protein Homology CDS 135951 136304 . - 0 ID=cds-WP_000558210.1;Parent=gene-CCO53_RS14435;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=CCO53_RS14435;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 136548 138194 . - . ID=gene-CCO53_RS14440;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CCO53_RS14440;old_locus_tag=CCO53_14420 NZ_NPLZ01000007.1 Protein Homology CDS 136548 138194 . - 0 ID=cds-WP_000729126.1;Parent=gene-CCO53_RS14440;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=CCO53_RS14440;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 138238 138531 . - . ID=gene-CCO53_RS14445;Name=CCO53_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14445;old_locus_tag=CCO53_14425 NZ_NPLZ01000007.1 Protein Homology CDS 138238 138531 . - 0 ID=cds-WP_000027827.1;Parent=gene-CCO53_RS14445;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=CCO53_RS14445;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 138807 140048 . + . ID=gene-CCO53_RS14450;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=CCO53_RS14450;old_locus_tag=CCO53_14430 NZ_NPLZ01000007.1 Protein Homology CDS 138807 140048 . + 0 ID=cds-WP_061383331.1;Parent=gene-CCO53_RS14450;Dbxref=GenBank:WP_061383331.1;Name=WP_061383331.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=CCO53_RS14450;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_061383331.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 140107 140583 . - . ID=gene-CCO53_RS14455;Name=CCO53_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14455;old_locus_tag=CCO53_14435 NZ_NPLZ01000007.1 Protein Homology CDS 140107 140583 . - 0 ID=cds-WP_001582770.1;Parent=gene-CCO53_RS14455;Dbxref=GenBank:WP_001582770.1;Name=WP_001582770.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=CCO53_RS14455;product=FxsA family protein;protein_id=WP_001582770.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 140924 142360 . + . ID=gene-CCO53_RS14460;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=CCO53_RS14460;old_locus_tag=CCO53_14440 NZ_NPLZ01000007.1 Protein Homology CDS 140924 142360 . + 0 ID=cds-WP_000069440.1;Parent=gene-CCO53_RS14460;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=CCO53_RS14460;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 142475 143776 . + . ID=gene-CCO53_RS14465;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=CCO53_RS14465;old_locus_tag=CCO53_14445 NZ_NPLZ01000007.1 Protein Homology CDS 142475 143776 . + 0 ID=cds-WP_000637595.1;Parent=gene-CCO53_RS14465;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=CCO53_RS14465;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 143897 144244 . + . ID=gene-CCO53_RS14470;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=CCO53_RS14470;old_locus_tag=CCO53_14450 NZ_NPLZ01000007.1 Protein Homology CDS 143897 144244 . + 0 ID=cds-WP_000887832.1;Parent=gene-CCO53_RS14470;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=CCO53_RS14470;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 144220 145923 . + . ID=gene-CCO53_RS14475;Name=CCO53_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14475;old_locus_tag=CCO53_14455 NZ_NPLZ01000007.1 Protein Homology CDS 144220 145923 . + 0 ID=cds-WP_000068885.1;Parent=gene-CCO53_RS14475;Dbxref=GenBank:WP_000068885.1;Name=WP_000068885.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=CCO53_RS14475;product=protein-disulfide reductase DsbD;protein_id=WP_000068885.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 145960 146535 . + . ID=gene-CCO53_RS14480;Name=CCO53_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14480;old_locus_tag=CCO53_14460 NZ_NPLZ01000007.1 Protein Homology CDS 145960 146535 . + 0 ID=cds-WP_001188509.1;Parent=gene-CCO53_RS14480;Dbxref=GenBank:WP_001188509.1;Name=WP_001188509.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=CCO53_RS14480;product=transcriptional regulator;protein_id=WP_001188509.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 146651 146726 . + . ID=gene-CCO53_RS14485;Name=CCO53_RS14485;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS14485;old_locus_tag=CCO53_14465 NZ_NPLZ01000007.1 tRNAscan-SE tRNA 146651 146726 . + . ID=rna-CCO53_RS14485;Parent=gene-CCO53_RS14485;anticodon=(pos:146684..146686);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS14485;product=tRNA-Phe NZ_NPLZ01000007.1 tRNAscan-SE exon 146651 146726 . + . ID=exon-CCO53_RS14485-1;Parent=rna-CCO53_RS14485;anticodon=(pos:146684..146686);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS14485;product=tRNA-Phe NZ_NPLZ01000007.1 RefSeq gene 146806 147012 . - . ID=gene-CCO53_RS14490;Name=CCO53_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14490;old_locus_tag=CCO53_14470 NZ_NPLZ01000007.1 Protein Homology CDS 146806 147012 . - 0 ID=cds-WP_058331919.1;Parent=gene-CCO53_RS14490;Dbxref=GenBank:WP_058331919.1;Name=WP_058331919.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120549.1;locus_tag=CCO53_RS14490;product=helix-turn-helix domain-containing protein;protein_id=WP_058331919.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 147009 147486 . - . ID=gene-CCO53_RS14495;Name=CCO53_RS14495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS14495;old_locus_tag=CCO53_14475;pseudo=true NZ_NPLZ01000007.1 Protein Homology CDS 147009 147486 . - 0 ID=cds-CCO53_RS14495;Parent=gene-CCO53_RS14495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809437.1;locus_tag=CCO53_RS14495;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 148054 148611 . - . ID=gene-CCO53_RS14505;Name=CCO53_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14505;old_locus_tag=CCO53_14485 NZ_NPLZ01000007.1 Protein Homology CDS 148054 148611 . - 0 ID=cds-WP_076727887.1;Parent=gene-CCO53_RS14505;Dbxref=GenBank:WP_076727887.1;Name=WP_076727887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012368.1;locus_tag=CCO53_RS14505;product=hypothetical protein;protein_id=WP_076727887.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 148641 149612 . - . ID=gene-CCO53_RS14510;Name=CCO53_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14510;old_locus_tag=CCO53_14490 NZ_NPLZ01000007.1 Protein Homology CDS 148641 149612 . - 0 ID=cds-WP_094887728.1;Parent=gene-CCO53_RS14510;Dbxref=GenBank:WP_094887728.1;Name=WP_094887728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029370.1;locus_tag=CCO53_RS14510;product=DUF4747 family protein;protein_id=WP_094887728.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 149934 150716 . + . ID=gene-CCO53_RS14515;Name=CCO53_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14515;old_locus_tag=CCO53_14495 NZ_NPLZ01000007.1 Protein Homology CDS 149934 150716 . + 0 ID=cds-WP_080160348.1;Parent=gene-CCO53_RS14515;Dbxref=GenBank:WP_080160348.1;Name=WP_080160348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001424109.1;locus_tag=CCO53_RS14515;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_080160348.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 150703 151632 . + . ID=gene-CCO53_RS14520;Name=CCO53_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14520;old_locus_tag=CCO53_14500 NZ_NPLZ01000007.1 Protein Homology CDS 150703 151632 . + 0 ID=cds-WP_080160349.1;Parent=gene-CCO53_RS14520;Dbxref=GenBank:WP_080160349.1;Name=WP_080160349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365810.1;locus_tag=CCO53_RS14520;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_080160349.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 151857 153014 . - . ID=gene-CCO53_RS14525;Name=CCO53_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14525;old_locus_tag=CCO53_14505 NZ_NPLZ01000007.1 Protein Homology CDS 151857 153014 . - 0 ID=cds-WP_058331914.1;Parent=gene-CCO53_RS14525;Dbxref=GenBank:WP_058331914.1;Name=WP_058331914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806483.1;locus_tag=CCO53_RS14525;product=DUF3322 domain-containing protein;protein_id=WP_058331914.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 153016 154362 . - . ID=gene-CCO53_RS24250;Name=CCO53_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS24250 NZ_NPLZ01000007.1 Protein Homology CDS 153016 154362 . - 0 ID=cds-WP_336603349.1;Parent=gene-CCO53_RS24250;Dbxref=GenBank:WP_336603349.1;Name=WP_336603349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002379578.1;locus_tag=CCO53_RS24250;product=SbcC/MukB-like Walker B domain-containing protein;protein_id=WP_336603349.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 156100 156303 . - . ID=gene-CCO53_RS24400;Name=CCO53_RS24400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24400;partial=true;pseudo=true;start_range=.,156100 NZ_NPLZ01000007.1 Protein Homology CDS 156100 156303 . - 0 ID=cds-CCO53_RS24400;Parent=gene-CCO53_RS24400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024944.6;locus_tag=CCO53_RS24400;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,156100;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 156300 157049 . - . ID=gene-CCO53_RS14535;Name=CCO53_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14535;old_locus_tag=CCO53_14515 NZ_NPLZ01000007.1 Protein Homology CDS 156300 157049 . - 0 ID=cds-WP_176456005.1;Parent=gene-CCO53_RS14535;Dbxref=GenBank:WP_176456005.1;Name=WP_176456005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145526.1;locus_tag=CCO53_RS14535;product=DUF4194 domain-containing protein;protein_id=WP_176456005.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 157055 158551 . - . ID=gene-CCO53_RS14540;Name=CCO53_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14540;old_locus_tag=CCO53_14520 NZ_NPLZ01000007.1 Protein Homology CDS 157055 158551 . - 0 ID=cds-WP_076727868.1;Parent=gene-CCO53_RS14540;Dbxref=GenBank:WP_076727868.1;Name=WP_076727868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806486.1;locus_tag=CCO53_RS14540;product=DUF3375 domain-containing protein;protein_id=WP_076727868.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 159145 159298 . + . ID=gene-CCO53_RS14545;Name=CCO53_RS14545;end_range=159298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS14545;partial=true;pseudo=true NZ_NPLZ01000007.1 Protein Homology CDS 159145 159298 . + 0 ID=cds-CCO53_RS14545;Parent=gene-CCO53_RS14545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=159298,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975783.1;locus_tag=CCO53_RS14545;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 159285 159437 . + . ID=gene-CCO53_RS24405;Name=CCO53_RS24405;end_range=159437,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24405;old_locus_tag=CCO53_14525;partial=true;pseudo=true;start_range=.,159285 NZ_NPLZ01000007.1 Protein Homology CDS 159285 159437 . + 0 ID=cds-CCO53_RS24405;Parent=gene-CCO53_RS24405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=159437,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954536.1;locus_tag=CCO53_RS24405;partial=true;product=integrase;pseudo=true;start_range=.,159285;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 159438 159835 . - . ID=gene-CCO53_RS14555;Name=CCO53_RS14555;end_range=159835,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS14555;old_locus_tag=CCO53_14530;partial=true;pseudo=true;start_range=.,159438 NZ_NPLZ01000007.1 Protein Homology CDS 159438 159835 . - 0 ID=cds-CCO53_RS14555;Parent=gene-CCO53_RS14555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=159835,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=CCO53_RS14555;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,159438;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 160052 160543 . - . ID=gene-CCO53_RS14560;Name=CCO53_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14560;old_locus_tag=CCO53_14535 NZ_NPLZ01000007.1 Protein Homology CDS 160052 160543 . - 0 ID=cds-WP_058331912.1;Parent=gene-CCO53_RS14560;Dbxref=GenBank:WP_058331912.1;Name=WP_058331912.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=CCO53_RS14560;product=GNAT family N-acetyltransferase;protein_id=WP_058331912.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 160540 160833 . - . ID=gene-CCO53_RS14565;Name=CCO53_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14565;old_locus_tag=CCO53_14540 NZ_NPLZ01000007.1 Protein Homology CDS 160540 160833 . - 0 ID=cds-WP_058331911.1;Parent=gene-CCO53_RS14565;Dbxref=GenBank:WP_058331911.1;Name=WP_058331911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228835.1;locus_tag=CCO53_RS14565;product=DUF1778 domain-containing protein;protein_id=WP_058331911.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 161324 161547 . + . ID=gene-CCO53_RS23695;Name=CCO53_RS23695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23695;pseudo=true NZ_NPLZ01000007.1 Protein Homology CDS 161324 161547 . + 0 ID=cds-CCO53_RS23695;Parent=gene-CCO53_RS23695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=CCO53_RS23695;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 161812 162687 . + . ID=gene-CCO53_RS14570;Name=CCO53_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14570;old_locus_tag=CCO53_14545 NZ_NPLZ01000007.1 Protein Homology CDS 161812 162687 . + 0 ID=cds-WP_076727861.1;Parent=gene-CCO53_RS14570;Dbxref=GenBank:WP_076727861.1;Name=WP_076727861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=CCO53_RS14570;product=AraC family transcriptional regulator;protein_id=WP_076727861.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 162699 162971 . + . ID=gene-CCO53_RS14575;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=CCO53_RS14575;old_locus_tag=CCO53_14550 NZ_NPLZ01000007.1 Protein Homology CDS 162699 162971 . + 0 ID=cds-WP_001519408.1;Parent=gene-CCO53_RS14575;Dbxref=GenBank:WP_001519408.1;Name=WP_001519408.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899482.1;locus_tag=CCO53_RS14575;product=transcriptional regulator RtsB;protein_id=WP_001519408.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 163168 165135 . - . ID=gene-CCO53_RS14580;Name=CCO53_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14580;old_locus_tag=CCO53_14555 NZ_NPLZ01000007.1 Protein Homology CDS 163168 165135 . - 0 ID=cds-WP_080160351.1;Parent=gene-CCO53_RS14580;Dbxref=GenBank:WP_080160351.1;Name=WP_080160351.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999321.1;locus_tag=CCO53_RS14580;product=ATP-binding cassette domain-containing protein;protein_id=WP_080160351.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 165128 165550 . - . ID=gene-CCO53_RS14585;Name=CCO53_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14585;old_locus_tag=CCO53_14560 NZ_NPLZ01000007.1 Protein Homology CDS 165128 165550 . - 0 ID=cds-WP_232230656.1;Parent=gene-CCO53_RS14585;Dbxref=GenBank:WP_232230656.1;Name=WP_232230656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703102.1;locus_tag=CCO53_RS14585;product=hypothetical protein;protein_id=WP_232230656.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 165558 166793 . - . ID=gene-CCO53_RS14590;Name=CCO53_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14590;old_locus_tag=CCO53_14565 NZ_NPLZ01000007.1 Protein Homology CDS 165558 166793 . - 0 ID=cds-WP_058331910.1;Parent=gene-CCO53_RS14590;Dbxref=GenBank:WP_058331910.1;Name=WP_058331910.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060876.1;locus_tag=CCO53_RS14590;product=HlyD family secretion protein;protein_id=WP_058331910.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 166795 168012 . - . ID=gene-CCO53_RS14595;Name=CCO53_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14595;old_locus_tag=CCO53_14570 NZ_NPLZ01000007.1 Protein Homology CDS 166795 168012 . - 0 ID=cds-WP_076727856.1;Parent=gene-CCO53_RS14595;Dbxref=GenBank:WP_076727856.1;Name=WP_076727856.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855874.1;locus_tag=CCO53_RS14595;product=TolC family protein;protein_id=WP_076727856.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 168002 169051 . - . ID=gene-CCO53_RS14600;Name=CCO53_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14600;old_locus_tag=CCO53_14575 NZ_NPLZ01000007.1 Protein Homology CDS 168002 169051 . - 0 ID=cds-WP_231130999.1;Parent=gene-CCO53_RS14600;Dbxref=GenBank:WP_231130999.1;Name=WP_231130999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000545578.1;locus_tag=CCO53_RS14600;product=hypothetical protein;protein_id=WP_231130999.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 169014 169460 . - . ID=gene-CCO53_RS14605;Name=CCO53_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14605;old_locus_tag=CCO53_14580 NZ_NPLZ01000007.1 Protein Homology CDS 169014 169460 . - 0 ID=cds-WP_058331909.1;Parent=gene-CCO53_RS14605;Dbxref=GenBank:WP_058331909.1;Name=WP_058331909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001271663.1;locus_tag=CCO53_RS14605;product=hypothetical protein;protein_id=WP_058331909.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 169957 178830 . + . ID=gene-CCO53_RS14610;Name=CCO53_RS14610;end_range=178830,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS14610;old_locus_tag=CCO53_14585;partial=true;pseudo=true NZ_NPLZ01000007.1 Protein Homology CDS 169957 178830 . + 0 ID=cds-CCO53_RS14610;Parent=gene-CCO53_RS14610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=178830,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039533.5;locus_tag=CCO53_RS14610;partial=true;product=Ig-like domain-containing protein;pseudo=true;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 178882 179121 . + . ID=gene-CCO53_RS24260;Name=CCO53_RS24260;end_range=179121,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24260;partial=true;pseudo=true;start_range=.,178882 NZ_NPLZ01000007.1 Protein Homology CDS 178882 179121 . + 0 ID=cds-CCO53_RS24260;Parent=gene-CCO53_RS24260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=179121,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033510.3;locus_tag=CCO53_RS24260;partial=true;product=hypothetical protein;pseudo=true;start_range=.,178882;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 179134 179268 . + . ID=gene-CCO53_RS24265;Name=CCO53_RS24265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24265;partial=true;pseudo=true;start_range=.,179134 NZ_NPLZ01000007.1 Protein Homology CDS 179134 179268 . + 0 ID=cds-CCO53_RS24265;Parent=gene-CCO53_RS24265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=CCO53_RS24265;partial=true;product=hypothetical protein;pseudo=true;start_range=.,179134;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 179562 180467 . - . ID=gene-CCO53_RS14615;Name=CCO53_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14615;old_locus_tag=CCO53_14590 NZ_NPLZ01000007.1 Protein Homology CDS 179562 180467 . - 0 ID=cds-WP_001268200.1;Parent=gene-CCO53_RS14615;Dbxref=GenBank:WP_001268200.1;Name=WP_001268200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=CCO53_RS14615;product=SdiA-regulated domain-containing protein;protein_id=WP_001268200.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 180770 182170 . + . ID=gene-CCO53_RS14620;Name=CCO53_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14620;old_locus_tag=CCO53_14595 NZ_NPLZ01000007.1 Protein Homology CDS 180770 182170 . + 0 ID=cds-WP_000773784.1;Parent=gene-CCO53_RS14620;Dbxref=GenBank:WP_000773784.1;Name=WP_000773784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=CCO53_RS14620;product=DUF7594 domain-containing protein;protein_id=WP_000773784.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 182254 182847 . - . ID=gene-CCO53_RS14625;Name=CCO53_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14625;old_locus_tag=CCO53_14600 NZ_NPLZ01000007.1 Protein Homology CDS 182254 182847 . - 0 ID=cds-WP_336603348.1;Parent=gene-CCO53_RS14625;Dbxref=GenBank:WP_336603348.1;Name=WP_336603348.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=CCO53_RS14625;product=molecular chaperone;protein_id=WP_336603348.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 182922 183695 . - . ID=gene-CCO53_RS14630;Name=CCO53_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14630;old_locus_tag=CCO53_14605 NZ_NPLZ01000007.1 Protein Homology CDS 182922 183695 . - 0 ID=cds-WP_000544929.1;Parent=gene-CCO53_RS14630;Dbxref=GenBank:WP_000544929.1;Name=WP_000544929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=CCO53_RS14630;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544929.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 183688 184314 . - . ID=gene-CCO53_RS14635;Name=CCO53_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14635;old_locus_tag=CCO53_14610 NZ_NPLZ01000007.1 Protein Homology CDS 183688 184314 . - 0 ID=cds-WP_000816143.1;Parent=gene-CCO53_RS14635;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=CCO53_RS14635;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 184328 186757 . - . ID=gene-CCO53_RS14640;Name=CCO53_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14640;old_locus_tag=CCO53_14615 NZ_NPLZ01000007.1 Protein Homology CDS 184328 186757 . - 0 ID=cds-WP_058331905.1;Parent=gene-CCO53_RS14640;Dbxref=GenBank:WP_058331905.1;Name=WP_058331905.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=CCO53_RS14640;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_058331905.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 187132 188763 . + . ID=gene-CCO53_RS14645;Name=CCO53_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14645;old_locus_tag=CCO53_14620 NZ_NPLZ01000007.1 Protein Homology CDS 187132 188763 . + 0 ID=cds-WP_000682908.1;Parent=gene-CCO53_RS14645;Dbxref=GenBank:WP_000682908.1;Name=WP_000682908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=CCO53_RS14645;product=sensor histidine kinase;protein_id=WP_000682908.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 188760 189479 . + . ID=gene-CCO53_RS14650;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=CCO53_RS14650;old_locus_tag=CCO53_14625 NZ_NPLZ01000007.1 Protein Homology CDS 188760 189479 . + 0 ID=cds-WP_000611307.1;Parent=gene-CCO53_RS14650;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=CCO53_RS14650;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 189796 190062 . + . ID=gene-CCO53_RS14655;Name=CCO53_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14655;old_locus_tag=CCO53_14630 NZ_NPLZ01000007.1 Protein Homology CDS 189796 190062 . + 0 ID=cds-WP_031605721.1;Parent=gene-CCO53_RS14655;Dbxref=GenBank:WP_031605721.1;Name=WP_031605721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=CCO53_RS14655;product=hypothetical protein;protein_id=WP_031605721.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq pseudogene 190209 191541 . + . ID=gene-CCO53_RS14660;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=pseudogene;locus_tag=CCO53_RS14660;old_locus_tag=CCO53_14635;pseudo=true NZ_NPLZ01000007.1 Protein Homology CDS 190209 191541 . + 0 ID=cds-CCO53_RS14660;Parent=gene-CCO53_RS14660;Note=frameshifted;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=CCO53_RS14660;product=anaerobic C4-dicarboxylate transporter DcuB;pseudo=true;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 191637 193283 . + . ID=gene-CCO53_RS14665;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=CCO53_RS14665;old_locus_tag=CCO53_14640 NZ_NPLZ01000007.1 Protein Homology CDS 191637 193283 . + 0 ID=cds-WP_058331904.1;Parent=gene-CCO53_RS14665;Dbxref=GenBank:WP_058331904.1;Name=WP_058331904.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=CCO53_RS14665;product=class I fumarate hydratase FumA;protein_id=WP_058331904.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 193381 194811 . - . ID=gene-CCO53_RS14670;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CCO53_RS14670;old_locus_tag=CCO53_14645 NZ_NPLZ01000007.1 Protein Homology CDS 193381 194811 . - 0 ID=cds-WP_094887730.1;Parent=gene-CCO53_RS14670;Dbxref=GenBank:WP_094887730.1;Name=WP_094887730.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=CCO53_RS14670;product=melibiose:sodium transporter MelB;protein_id=WP_094887730.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 194895 196250 . - . ID=gene-CCO53_RS14675;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=CCO53_RS14675;old_locus_tag=CCO53_14650 NZ_NPLZ01000007.1 Protein Homology CDS 194895 196250 . - 0 ID=cds-WP_001534541.1;Parent=gene-CCO53_RS14675;Dbxref=GenBank:WP_001534541.1;Name=WP_001534541.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=CCO53_RS14675;product=alpha-galactosidase;protein_id=WP_001534541.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 196519 197451 . + . ID=gene-CCO53_RS14680;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=CCO53_RS14680;old_locus_tag=CCO53_14655 NZ_NPLZ01000007.1 Protein Homology CDS 196519 197451 . + 0 ID=cds-WP_080160354.1;Parent=gene-CCO53_RS14680;Dbxref=GenBank:WP_080160354.1;Name=WP_080160354.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=CCO53_RS14680;product=transcriptional regulator MelR;protein_id=WP_080160354.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 197684 199951 . + . ID=gene-CCO53_RS14685;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=CCO53_RS14685;old_locus_tag=CCO53_14660 NZ_NPLZ01000007.1 Protein Homology CDS 197684 199951 . + 0 ID=cds-WP_094887735.1;Parent=gene-CCO53_RS14685;Dbxref=GenBank:WP_094887735.1;Name=WP_094887735.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=CCO53_RS14685;product=arginine decarboxylase;protein_id=WP_094887735.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 200248 201009 . + . ID=gene-CCO53_RS14690;Name=CCO53_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14690;old_locus_tag=CCO53_14665 NZ_NPLZ01000007.1 Protein Homology CDS 200248 201009 . + 0 ID=cds-WP_001217076.1;Parent=gene-CCO53_RS14690;Dbxref=GenBank:WP_001217076.1;Name=WP_001217076.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=CCO53_RS14690;product=AraC family transcriptional regulator;protein_id=WP_001217076.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 201149 202486 . + . ID=gene-CCO53_RS14695;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=CCO53_RS14695;old_locus_tag=CCO53_14670 NZ_NPLZ01000007.1 Protein Homology CDS 201149 202486 . + 0 ID=cds-WP_000093130.1;Parent=gene-CCO53_RS14695;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=CCO53_RS14695;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 202620 204263 . + . ID=gene-CCO53_RS14700;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=CCO53_RS14700;old_locus_tag=CCO53_14675 NZ_NPLZ01000007.1 Protein Homology CDS 202620 204263 . + 0 ID=cds-WP_000919294.1;Parent=gene-CCO53_RS14700;Dbxref=GenBank:WP_000919294.1;Name=WP_000919294.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=CCO53_RS14700;product=phosphoethanolamine transferase EptA;protein_id=WP_000919294.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 204260 204928 . + . ID=gene-CCO53_RS14705;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=CCO53_RS14705;old_locus_tag=CCO53_14680 NZ_NPLZ01000007.1 Protein Homology CDS 204260 204928 . + 0 ID=cds-WP_000697899.1;Parent=gene-CCO53_RS14705;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=CCO53_RS14705;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 204938 206008 . + . ID=gene-CCO53_RS14710;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=CCO53_RS14710;old_locus_tag=CCO53_14685 NZ_NPLZ01000007.1 Protein Homology CDS 204938 206008 . + 0 ID=cds-WP_001212189.1;Parent=gene-CCO53_RS14710;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=CCO53_RS14710;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 206016 206105 . - . ID=gene-CCO53_RS14715;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=CCO53_RS14715;old_locus_tag=CCO53_14690 NZ_NPLZ01000007.1 Protein Homology CDS 206016 206105 . - 0 ID=cds-WP_000844399.1;Parent=gene-CCO53_RS14715;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=CCO53_RS14715;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 206175 207677 . - . ID=gene-CCO53_RS14720;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=CCO53_RS14720;old_locus_tag=CCO53_14695 NZ_NPLZ01000007.1 Protein Homology CDS 206175 207677 . - 0 ID=cds-WP_000919710.1;Parent=gene-CCO53_RS14720;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=CCO53_RS14720;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 208145 208480 . + . ID=gene-CCO53_RS14725;Name=CCO53_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14725;old_locus_tag=CCO53_14700 NZ_NPLZ01000007.1 Protein Homology CDS 208145 208480 . + 0 ID=cds-WP_000056482.1;Parent=gene-CCO53_RS14725;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=CCO53_RS14725;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 208600 209043 . + . ID=gene-CCO53_RS14730;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=CCO53_RS14730;old_locus_tag=CCO53_14705 NZ_NPLZ01000007.1 Protein Homology CDS 208600 209043 . + 0 ID=cds-WP_001131301.1;Parent=gene-CCO53_RS14730;Dbxref=GenBank:WP_001131301.1;Name=WP_001131301.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=CCO53_RS14730;product=VOC family metalloprotein YjdN;protein_id=WP_001131301.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 209195 209629 . + . ID=gene-CCO53_RS14735;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=CCO53_RS14735;old_locus_tag=CCO53_14710 NZ_NPLZ01000007.1 Protein Homology CDS 209195 209629 . + 0 ID=cds-WP_001549776.1;Parent=gene-CCO53_RS14735;Dbxref=GenBank:WP_001549776.1;Name=WP_001549776.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=CCO53_RS14735;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001549776.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 209887 210795 . + . ID=gene-CCO53_RS14740;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=CCO53_RS14740;old_locus_tag=CCO53_14715 NZ_NPLZ01000007.1 Protein Homology CDS 209887 210795 . + 0 ID=cds-WP_000457033.1;Parent=gene-CCO53_RS14740;Dbxref=GenBank:WP_000457033.1;Name=WP_000457033.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=CCO53_RS14740;product=lipid A hydroxylase LpxO;protein_id=WP_000457033.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 211150 213297 . + . ID=gene-CCO53_RS14745;Name=CCO53_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14745;old_locus_tag=CCO53_14720 NZ_NPLZ01000007.1 Protein Homology CDS 211150 213297 . + 0 ID=cds-WP_011233236.1;Parent=gene-CCO53_RS14745;Dbxref=GenBank:WP_011233236.1;Name=WP_011233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=CCO53_RS14745;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_011233236.1;transl_except=(pos:211567..211569%2Caa:Sec);transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 213474 214163 . + . ID=gene-CCO53_RS14750;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=CCO53_RS14750;old_locus_tag=CCO53_14725 NZ_NPLZ01000007.1 Protein Homology CDS 213474 214163 . + 0 ID=cds-WP_000771454.1;Parent=gene-CCO53_RS14750;Dbxref=GenBank:WP_000771454.1;Name=WP_000771454.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=CCO53_RS14750;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000771454.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 214321 215631 . - . ID=gene-CCO53_RS14755;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=CCO53_RS14755;old_locus_tag=CCO53_14730 NZ_NPLZ01000007.1 Protein Homology CDS 214321 215631 . - 0 ID=cds-WP_080160357.1;Parent=gene-CCO53_RS14755;Dbxref=GenBank:WP_080160357.1;Name=WP_080160357.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=CCO53_RS14755;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_080160357.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 215976 216596 . - . ID=gene-CCO53_RS14760;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=CCO53_RS14760;old_locus_tag=CCO53_14735 NZ_NPLZ01000007.1 Protein Homology CDS 215976 216596 . - 0 ID=cds-WP_058331899.1;Parent=gene-CCO53_RS14760;Dbxref=GenBank:WP_058331899.1;Name=WP_058331899.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=CCO53_RS14760;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_058331899.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 216593 218815 . - . ID=gene-CCO53_RS14765;Name=nrfEF;gbkey=Gene;gene=nrfEF;gene_biotype=protein_coding;locus_tag=CCO53_RS14765;old_locus_tag=CCO53_14740 NZ_NPLZ01000007.1 Protein Homology CDS 216593 218815 . - 0 ID=cds-WP_080160358.1;Parent=gene-CCO53_RS14765;Dbxref=GenBank:WP_080160358.1;Name=WP_080160358.1;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO53_RS14765;product=heme lyase NrfEFG subunit NrfEF;protein_id=WP_080160358.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 218808 219764 . - . ID=gene-CCO53_RS14770;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=CCO53_RS14770;old_locus_tag=CCO53_14745 NZ_NPLZ01000007.1 Protein Homology CDS 218808 219764 . - 0 ID=cds-WP_000199624.1;Parent=gene-CCO53_RS14770;Dbxref=GenBank:WP_000199624.1;Name=WP_000199624.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=CCO53_RS14770;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000199624.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 219761 220432 . - . ID=gene-CCO53_RS14775;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=CCO53_RS14775;old_locus_tag=CCO53_14750 NZ_NPLZ01000007.1 Protein Homology CDS 219761 220432 . - 0 ID=cds-WP_001278025.1;Parent=gene-CCO53_RS14775;Dbxref=GenBank:WP_001278025.1;Name=WP_001278025.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=CCO53_RS14775;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278025.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 220429 220995 . - . ID=gene-CCO53_RS14780;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=CCO53_RS14780;old_locus_tag=CCO53_14755 NZ_NPLZ01000007.1 Protein Homology CDS 220429 220995 . - 0 ID=cds-WP_000115065.1;Parent=gene-CCO53_RS14780;Dbxref=GenBank:WP_000115065.1;Name=WP_000115065.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=CCO53_RS14780;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115065.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 221040 222476 . - . ID=gene-CCO53_RS14785;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=CCO53_RS14785;old_locus_tag=CCO53_14760 NZ_NPLZ01000007.1 Protein Homology CDS 221040 222476 . - 0 ID=cds-WP_094887731.1;Parent=gene-CCO53_RS14785;Dbxref=GenBank:WP_094887731.1;Name=WP_094887731.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=CCO53_RS14785;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_094887731.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 222908 224866 . + . ID=gene-CCO53_RS14795;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=CCO53_RS14795;old_locus_tag=CCO53_14770 NZ_NPLZ01000007.1 Protein Homology CDS 222908 224866 . + 0 ID=cds-WP_000083877.1;Parent=gene-CCO53_RS14795;Dbxref=GenBank:WP_000083877.1;Name=WP_000083877.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=CCO53_RS14795;product=acetate--CoA ligase;protein_id=WP_000083877.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 225106 225420 . + . ID=gene-CCO53_RS14800;Name=CCO53_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14800;old_locus_tag=CCO53_14775 NZ_NPLZ01000007.1 Protein Homology CDS 225106 225420 . + 0 ID=cds-WP_000999620.1;Parent=gene-CCO53_RS14800;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=CCO53_RS14800;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 225417 227066 . + . ID=gene-CCO53_RS14805;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=CCO53_RS14805;old_locus_tag=CCO53_14780 NZ_NPLZ01000007.1 Protein Homology CDS 225417 227066 . + 0 ID=cds-WP_000832536.1;Parent=gene-CCO53_RS14805;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=CCO53_RS14805;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 227105 227794 . - . ID=gene-CCO53_RS14810;Name=CCO53_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14810;old_locus_tag=CCO53_14785 NZ_NPLZ01000007.1 Protein Homology CDS 227105 227794 . - 0 ID=cds-WP_001067096.1;Parent=gene-CCO53_RS14810;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=CCO53_RS14810;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 227787 228197 . - . ID=gene-CCO53_RS14815;Name=CCO53_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14815;old_locus_tag=CCO53_14790 NZ_NPLZ01000007.1 Protein Homology CDS 227787 228197 . - 0 ID=cds-WP_000257347.1;Parent=gene-CCO53_RS14815;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=CCO53_RS14815;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 228301 229188 . + . ID=gene-CCO53_RS14820;Name=CCO53_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14820;old_locus_tag=CCO53_14795 NZ_NPLZ01000007.1 Protein Homology CDS 228301 229188 . + 0 ID=cds-WP_000354962.1;Parent=gene-CCO53_RS14820;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=CCO53_RS14820;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 229283 230929 . - . ID=gene-CCO53_RS14825;Name=CCO53_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14825;old_locus_tag=CCO53_14800 NZ_NPLZ01000007.1 Protein Homology CDS 229283 230929 . - 0 ID=cds-WP_000402189.1;Parent=gene-CCO53_RS14825;Dbxref=GenBank:WP_000402189.1;Name=WP_000402189.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=CCO53_RS14825;product=Na+/H+ antiporter;protein_id=WP_000402189.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 231079 232428 . - . ID=gene-CCO53_RS14835;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=CCO53_RS14835;old_locus_tag=CCO53_14810 NZ_NPLZ01000007.1 Protein Homology CDS 231079 232428 . - 0 ID=cds-WP_000106907.1;Parent=gene-CCO53_RS14835;Dbxref=GenBank:WP_000106907.1;Name=WP_000106907.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=CCO53_RS14835;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106907.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 232775 233443 . - . ID=gene-CCO53_RS14845;Name=CCO53_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14845;old_locus_tag=CCO53_14820 NZ_NPLZ01000007.1 Protein Homology CDS 232775 233443 . - 0 ID=cds-WP_058331896.1;Parent=gene-CCO53_RS14845;Dbxref=GenBank:WP_058331896.1;Name=WP_058331896.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=CCO53_RS14845;product=glutathione S-transferase family protein;protein_id=WP_058331896.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 233736 234194 . - . ID=gene-CCO53_RS14850;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=CCO53_RS14850;old_locus_tag=CCO53_14825 NZ_NPLZ01000007.1 Protein Homology CDS 233736 234194 . - 0 ID=cds-WP_000412686.1;Parent=gene-CCO53_RS14850;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=CCO53_RS14850;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 234281 234604 . + . ID=gene-CCO53_RS14855;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=CCO53_RS14855;old_locus_tag=CCO53_14830 NZ_NPLZ01000007.1 Protein Homology CDS 234281 234604 . + 0 ID=cds-WP_000019483.1;Parent=gene-CCO53_RS14855;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=CCO53_RS14855;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 234592 236193 . - . ID=gene-CCO53_RS14860;Name=CCO53_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14860;old_locus_tag=CCO53_14835 NZ_NPLZ01000007.1 Protein Homology CDS 234592 236193 . - 0 ID=cds-WP_061372460.1;Parent=gene-CCO53_RS14860;Dbxref=GenBank:WP_061372460.1;Name=WP_061372460.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=CCO53_RS14860;product=EAL domain-containing protein;protein_id=WP_061372460.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 236755 237036 . + . ID=gene-CCO53_RS14865;Name=CCO53_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14865;old_locus_tag=CCO53_14840 NZ_NPLZ01000007.1 Protein Homology CDS 236755 237036 . + 0 ID=cds-WP_000719058.1;Parent=gene-CCO53_RS14865;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=CCO53_RS14865;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 237461 239527 . - . ID=gene-CCO53_RS14870;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=CCO53_RS14870;old_locus_tag=CCO53_14845 NZ_NPLZ01000007.1 Protein Homology CDS 237461 239527 . - 0 ID=cds-WP_061372459.1;Parent=gene-CCO53_RS14870;Dbxref=GenBank:WP_061372459.1;Name=WP_061372459.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954991.1;locus_tag=CCO53_RS14870;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_061372459.1;transl_table=11 NZ_NPLZ01000007.1 RefSeq gene 239567 240382 . - . ID=gene-CCO53_RS14875;Name=CCO53_RS14875;end_range=240382,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14875;old_locus_tag=CCO53_14850;partial=true NZ_NPLZ01000007.1 Protein Homology CDS 239567 240382 . - 0 ID=cds-WP_176456348.1;Parent=gene-CCO53_RS14875;Dbxref=GenBank:WP_176456348.1;Name=WP_176456348.1;end_range=240382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO53_RS14875;partial=true;product=Ig-like domain-containing protein;protein_id=WP_176456348.1;transl_table=11 ##sequence-region NZ_NPLZ01000008.1 1 230316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000008.1 RefSeq region 1 230316 . + . ID=NZ_NPLZ01000008.1:1..230316;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000008.1 RefSeq pseudogene 1 126 . - . ID=gene-CCO53_RS14880;Name=CCO53_RS14880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS14880;partial=true;pseudo=true;start_range=.,1 NZ_NPLZ01000008.1 Protein Homology CDS 1 126 . - 0 ID=cds-CCO53_RS14880;Parent=gene-CCO53_RS14880;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO53_RS14880;partial=true;product=sodium ion-translocating decarboxylase subunit beta;pseudo=true;start_range=.,1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 139 1908 . - . ID=gene-CCO53_RS14885;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO53_RS14885;old_locus_tag=CCO53_14855 NZ_NPLZ01000008.1 Protein Homology CDS 139 1908 . - 0 ID=cds-WP_094887736.1;Parent=gene-CCO53_RS14885;Dbxref=GenBank:WP_094887736.1;Name=WP_094887736.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO53_RS14885;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_094887736.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 1924 2169 . - . ID=gene-CCO53_RS14890;Name=CCO53_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14890;old_locus_tag=CCO53_14860 NZ_NPLZ01000008.1 Protein Homology CDS 1924 2169 . - 0 ID=cds-WP_058331385.1;Parent=gene-CCO53_RS14890;Dbxref=GenBank:WP_058331385.1;Name=WP_058331385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=CCO53_RS14890;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_058331385.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 2328 3668 . - . ID=gene-CCO53_RS14895;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=CCO53_RS14895;old_locus_tag=CCO53_14865 NZ_NPLZ01000008.1 Protein Homology CDS 2328 3668 . - 0 ID=cds-WP_094887737.1;Parent=gene-CCO53_RS14895;Dbxref=GenBank:WP_094887737.1;Name=WP_094887737.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=CCO53_RS14895;product=citrate/sodium symporter CitS;protein_id=WP_094887737.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 3913 4956 . + . ID=gene-CCO53_RS14900;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO53_RS14900;old_locus_tag=CCO53_14870 NZ_NPLZ01000008.1 Protein Homology CDS 3913 4956 . + 0 ID=cds-WP_080160003.1;Parent=gene-CCO53_RS14900;Dbxref=GenBank:WP_080160003.1;Name=WP_080160003.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=CCO53_RS14900;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_080160003.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 4986 5279 . + . ID=gene-CCO53_RS14905;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO53_RS14905;old_locus_tag=CCO53_14875 NZ_NPLZ01000008.1 Protein Homology CDS 4986 5279 . + 0 ID=cds-WP_000691460.1;Parent=gene-CCO53_RS14905;Dbxref=GenBank:WP_000691460.1;Name=WP_000691460.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=CCO53_RS14905;product=citrate lyase acyl carrier protein;protein_id=WP_000691460.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 5276 6145 . + . ID=gene-CCO53_RS14910;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO53_RS14910;old_locus_tag=CCO53_14880 NZ_NPLZ01000008.1 Protein Homology CDS 5276 6145 . + 0 ID=cds-WP_000804559.1;Parent=gene-CCO53_RS14910;Dbxref=GenBank:WP_000804559.1;Name=WP_000804559.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=CCO53_RS14910;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000804559.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 6156 7676 . + . ID=gene-CCO53_RS14915;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO53_RS14915;old_locus_tag=CCO53_14885 NZ_NPLZ01000008.1 Protein Homology CDS 6156 7676 . + 0 ID=cds-WP_000665568.1;Parent=gene-CCO53_RS14915;Dbxref=GenBank:WP_000665568.1;Name=WP_000665568.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=CCO53_RS14915;product=citrate lyase subunit alpha;protein_id=WP_000665568.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 7676 8227 . + . ID=gene-CCO53_RS14920;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO53_RS14920;old_locus_tag=CCO53_14890 NZ_NPLZ01000008.1 Protein Homology CDS 7676 8227 . + 0 ID=cds-WP_058331383.1;Parent=gene-CCO53_RS14920;Dbxref=GenBank:WP_058331383.1;Name=WP_058331383.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=CCO53_RS14920;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_058331383.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 8205 9113 . + . ID=gene-CCO53_RS14925;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO53_RS14925;old_locus_tag=CCO53_14895 NZ_NPLZ01000008.1 Protein Homology CDS 8205 9113 . + 0 ID=cds-WP_058331382.1;Parent=gene-CCO53_RS14925;Dbxref=GenBank:WP_058331382.1;Name=WP_058331382.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=CCO53_RS14925;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_058331382.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 9293 10114 . + . ID=gene-CCO53_RS14930;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CCO53_RS14930;old_locus_tag=CCO53_14900 NZ_NPLZ01000008.1 Protein Homology CDS 9293 10114 . + 0 ID=cds-WP_000544032.1;Parent=gene-CCO53_RS14930;Dbxref=GenBank:WP_000544032.1;Name=WP_000544032.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=CCO53_RS14930;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544032.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 10977 12125 . + . ID=gene-CCO53_RS14940;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=CCO53_RS14940;old_locus_tag=CCO53_14910 NZ_NPLZ01000008.1 Protein Homology CDS 10977 12125 . + 0 ID=cds-WP_023197364.1;Parent=gene-CCO53_RS14940;Dbxref=GenBank:WP_023197364.1;Name=WP_023197364.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=CCO53_RS14940;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_023197364.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 12144 15371 . + . ID=gene-CCO53_RS14945;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CCO53_RS14945;old_locus_tag=CCO53_14915 NZ_NPLZ01000008.1 Protein Homology CDS 12144 15371 . + 0 ID=cds-WP_094887738.1;Parent=gene-CCO53_RS14945;Dbxref=GenBank:WP_094887738.1;Name=WP_094887738.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=CCO53_RS14945;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_094887738.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 15645 16040 . + . ID=gene-CCO53_RS14950;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=CCO53_RS14950;old_locus_tag=CCO53_14920 NZ_NPLZ01000008.1 Protein Homology CDS 15645 16040 . + 0 ID=cds-WP_000333324.1;Parent=gene-CCO53_RS14950;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=CCO53_RS14950;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 16118 16714 . - . ID=gene-CCO53_RS14955;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=CCO53_RS14955;old_locus_tag=CCO53_14925 NZ_NPLZ01000008.1 Protein Homology CDS 16118 16714 . - 0 ID=cds-WP_000122864.1;Parent=gene-CCO53_RS14955;Dbxref=GenBank:WP_000122864.1;Name=WP_000122864.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=CCO53_RS14955;product=carnitine operon protein CaiE;protein_id=WP_000122864.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 16823 17608 . - . ID=gene-CCO53_RS14960;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=CCO53_RS14960;old_locus_tag=CCO53_14930 NZ_NPLZ01000008.1 Protein Homology CDS 16823 17608 . - 0 ID=cds-WP_000004383.1;Parent=gene-CCO53_RS14960;Dbxref=GenBank:WP_000004383.1;Name=WP_000004383.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO53_RS14960;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004383.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 17662 19215 . - . ID=gene-CCO53_RS14965;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=CCO53_RS14965;old_locus_tag=CCO53_14935 NZ_NPLZ01000008.1 Protein Homology CDS 17662 19215 . - 0 ID=cds-WP_076934732.1;Parent=gene-CCO53_RS14965;Dbxref=GenBank:WP_076934732.1;Name=WP_076934732.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=CCO53_RS14965;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_076934732.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 19278 20495 . - . ID=gene-CCO53_RS14970;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=CCO53_RS14970;old_locus_tag=CCO53_14940 NZ_NPLZ01000008.1 Protein Homology CDS 19278 20495 . - 0 ID=cds-WP_001016209.1;Parent=gene-CCO53_RS14970;Dbxref=GenBank:WP_001016209.1;Name=WP_001016209.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=CCO53_RS14970;product=L-carnitine CoA-transferase;protein_id=WP_001016209.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 20607 21749 . - . ID=gene-CCO53_RS14975;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=CCO53_RS14975;old_locus_tag=CCO53_14945 NZ_NPLZ01000008.1 Protein Homology CDS 20607 21749 . - 0 ID=cds-WP_000347134.1;Parent=gene-CCO53_RS14975;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=CCO53_RS14975;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 21784 23301 . - . ID=gene-CCO53_RS14980;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=CCO53_RS14980;old_locus_tag=CCO53_14950 NZ_NPLZ01000008.1 Protein Homology CDS 21784 23301 . - 0 ID=cds-WP_000787073.1;Parent=gene-CCO53_RS14980;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=CCO53_RS14980;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 23782 24552 . + . ID=gene-CCO53_RS14990;Name=CCO53_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14990;old_locus_tag=CCO53_14960 NZ_NPLZ01000008.1 Protein Homology CDS 23782 24552 . + 0 ID=cds-WP_000692197.1;Parent=gene-CCO53_RS14990;Dbxref=GenBank:WP_000692197.1;Name=WP_000692197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=CCO53_RS14990;product=electron transfer flavoprotein FixA;protein_id=WP_000692197.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 24568 25509 . + . ID=gene-CCO53_RS14995;Name=CCO53_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS14995;old_locus_tag=CCO53_14965 NZ_NPLZ01000008.1 Protein Homology CDS 24568 25509 . + 0 ID=cds-WP_001032197.1;Parent=gene-CCO53_RS14995;Dbxref=GenBank:WP_001032197.1;Name=WP_001032197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=CCO53_RS14995;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032197.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 25559 26845 . + . ID=gene-CCO53_RS15000;Name=CCO53_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15000;old_locus_tag=CCO53_14970 NZ_NPLZ01000008.1 Protein Homology CDS 25559 26845 . + 0 ID=cds-WP_001287773.1;Parent=gene-CCO53_RS15000;Dbxref=GenBank:WP_001287773.1;Name=WP_001287773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=CCO53_RS15000;product=FAD-dependent oxidoreductase;protein_id=WP_001287773.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 26842 27129 . + . ID=gene-CCO53_RS15005;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=CCO53_RS15005;old_locus_tag=CCO53_14975 NZ_NPLZ01000008.1 Protein Homology CDS 26842 27129 . + 0 ID=cds-WP_000203736.1;Parent=gene-CCO53_RS15005;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=CCO53_RS15005;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 27276 28616 . + . ID=gene-CCO53_RS15010;Name=CCO53_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15010;old_locus_tag=CCO53_14980 NZ_NPLZ01000008.1 Protein Homology CDS 27276 28616 . + 0 ID=cds-WP_001187057.1;Parent=gene-CCO53_RS15010;Dbxref=GenBank:WP_001187057.1;Name=WP_001187057.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=CCO53_RS15010;product=MFS transporter;protein_id=WP_001187057.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 28705 28935 . + . ID=gene-CCO53_RS15015;Name=CCO53_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15015;old_locus_tag=CCO53_14985 NZ_NPLZ01000008.1 Protein Homology CDS 28705 28935 . + 0 ID=cds-WP_001172089.1;Parent=gene-CCO53_RS15015;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=CCO53_RS15015;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq pseudogene 28962 29056 . + . ID=gene-CCO53_RS23700;Name=CCO53_RS23700;end_range=29056,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS23700;partial=true;pseudo=true NZ_NPLZ01000008.1 Protein Homology CDS 28962 29056 . + 0 ID=cds-CCO53_RS23700;Parent=gene-CCO53_RS23700;Note=Required for full activity of KefC%2C a potassium-proton antiporter%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=29056,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=CCO53_RS23700;partial=true;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;pseudo=true;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 29222 29638 . + . ID=gene-CCO53_RS15020;Name=CCO53_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15020;old_locus_tag=CCO53_14990 NZ_NPLZ01000008.1 Protein Homology CDS 29222 29638 . + 0 ID=cds-WP_058331379.1;Parent=gene-CCO53_RS15020;Dbxref=GenBank:WP_058331379.1;Name=WP_058331379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=CCO53_RS15020;product=hypothetical protein;protein_id=WP_058331379.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 29858 30148 . - . ID=gene-CCO53_RS15025;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=CCO53_RS15025;old_locus_tag=CCO53_14995 NZ_NPLZ01000008.1 Protein Homology CDS 29858 30148 . - 0 ID=cds-WP_000745961.1;Parent=gene-CCO53_RS15025;Dbxref=GenBank:WP_000745961.1;Name=WP_000745961.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=CCO53_RS15025;product=DUF1471 family virulence protein SrfN;protein_id=WP_000745961.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 31044 32933 . + . ID=gene-CCO53_RS15040;Name=CCO53_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15040;old_locus_tag=CCO53_15010 NZ_NPLZ01000008.1 Protein Homology CDS 31044 32933 . + 0 ID=cds-WP_023234419.1;Parent=gene-CCO53_RS15040;Dbxref=GenBank:WP_023234419.1;Name=WP_023234419.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=CCO53_RS15040;product=sulfatase-like hydrolase/transferase;protein_id=WP_023234419.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq pseudogene 33285 33365 . - . ID=gene-CCO53_RS24410;Name=CCO53_RS24410;end_range=33365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24410;partial=true;pseudo=true NZ_NPLZ01000008.1 Protein Homology CDS 33285 33365 . - 0 ID=cds-CCO53_RS24410;Parent=gene-CCO53_RS24410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=33365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO53_RS24410;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 33487 34017 . + . ID=gene-CCO53_RS15060;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=CCO53_RS15060;old_locus_tag=CCO53_15030 NZ_NPLZ01000008.1 Protein Homology CDS 33487 34017 . + 0 ID=cds-WP_058331378.1;Parent=gene-CCO53_RS15060;Dbxref=GenBank:WP_058331378.1;Name=WP_058331378.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=CCO53_RS15060;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_058331378.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 34010 35872 . + . ID=gene-CCO53_RS15065;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=CCO53_RS15065;old_locus_tag=CCO53_15035 NZ_NPLZ01000008.1 Protein Homology CDS 34010 35872 . + 0 ID=cds-WP_057519785.1;Parent=gene-CCO53_RS15065;Dbxref=GenBank:WP_057519785.1;Name=WP_057519785.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=CCO53_RS15065;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_057519785.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 36071 36550 . + . ID=gene-CCO53_RS15070;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=CCO53_RS15070;old_locus_tag=CCO53_15040 NZ_NPLZ01000008.1 Protein Homology CDS 36071 36550 . + 0 ID=cds-WP_000624379.1;Parent=gene-CCO53_RS15070;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=CCO53_RS15070;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 36656 37504 . - . ID=gene-CCO53_RS15075;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=CCO53_RS15075;old_locus_tag=CCO53_15045 NZ_NPLZ01000008.1 Protein Homology CDS 36656 37504 . - 0 ID=cds-WP_000257211.1;Parent=gene-CCO53_RS15075;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=CCO53_RS15075;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 37515 37892 . - . ID=gene-CCO53_RS15080;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=CCO53_RS15080;old_locus_tag=CCO53_15050 NZ_NPLZ01000008.1 Protein Homology CDS 37515 37892 . - 0 ID=cds-WP_000610894.1;Parent=gene-CCO53_RS15080;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=CCO53_RS15080;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 37895 38716 . - . ID=gene-CCO53_RS15085;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CCO53_RS15085;old_locus_tag=CCO53_15055 NZ_NPLZ01000008.1 Protein Homology CDS 37895 38716 . - 0 ID=cds-WP_001065397.1;Parent=gene-CCO53_RS15085;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=CCO53_RS15085;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 38713 39702 . - . ID=gene-CCO53_RS15090;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CCO53_RS15090;old_locus_tag=CCO53_15060 NZ_NPLZ01000008.1 Protein Homology CDS 38713 39702 . - 0 ID=cds-WP_000093005.1;Parent=gene-CCO53_RS15090;Dbxref=GenBank:WP_000093005.1;Name=WP_000093005.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=CCO53_RS15090;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000093005.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 39702 40988 . - . ID=gene-CCO53_RS15095;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=CCO53_RS15095;old_locus_tag=CCO53_15065 NZ_NPLZ01000008.1 Protein Homology CDS 39702 40988 . - 0 ID=cds-WP_000800482.1;Parent=gene-CCO53_RS15095;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=CCO53_RS15095;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 41042 43402 . - . ID=gene-CCO53_RS15100;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=CCO53_RS15100;old_locus_tag=CCO53_15070 NZ_NPLZ01000008.1 Protein Homology CDS 41042 43402 . - 0 ID=cds-WP_000746119.1;Parent=gene-CCO53_RS15100;Dbxref=GenBank:WP_000746119.1;Name=WP_000746119.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=CCO53_RS15100;product=LPS assembly protein LptD;protein_id=WP_000746119.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 43656 44468 . + . ID=gene-CCO53_RS15105;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=CCO53_RS15105;old_locus_tag=CCO53_15075 NZ_NPLZ01000008.1 Protein Homology CDS 43656 44468 . + 0 ID=cds-WP_001200595.1;Parent=gene-CCO53_RS15105;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=CCO53_RS15105;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 44563 45222 . - . ID=gene-CCO53_RS15110;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=CCO53_RS15110;old_locus_tag=CCO53_15080 NZ_NPLZ01000008.1 Protein Homology CDS 44563 45222 . - 0 ID=cds-WP_000525198.1;Parent=gene-CCO53_RS15110;Dbxref=GenBank:WP_000525198.1;Name=WP_000525198.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=CCO53_RS15110;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525198.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 45234 48140 . - . ID=gene-CCO53_RS15115;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=CCO53_RS15115;old_locus_tag=CCO53_15085 NZ_NPLZ01000008.1 Protein Homology CDS 45234 48140 . - 0 ID=cds-WP_001116966.1;Parent=gene-CCO53_RS15115;Dbxref=GenBank:WP_001116966.1;Name=WP_001116966.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=CCO53_RS15115;product=RNA polymerase-associated protein RapA;protein_id=WP_001116966.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 48314 50665 . - . ID=gene-CCO53_RS15120;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=CCO53_RS15120;old_locus_tag=CCO53_15090 NZ_NPLZ01000008.1 Protein Homology CDS 48314 50665 . - 0 ID=cds-WP_058331377.1;Parent=gene-CCO53_RS15120;Dbxref=GenBank:WP_058331377.1;Name=WP_058331377.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=CCO53_RS15120;product=DNA polymerase II;protein_id=WP_058331377.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 50709 51329 . - . ID=gene-CCO53_RS15125;Name=CCO53_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15125;old_locus_tag=CCO53_15095 NZ_NPLZ01000008.1 Protein Homology CDS 50709 51329 . - 0 ID=cds-WP_000877512.1;Parent=gene-CCO53_RS15125;Dbxref=GenBank:WP_000877512.1;Name=WP_000877512.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=CCO53_RS15125;product=YdcF family protein;protein_id=WP_000877512.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 52048 52467 . + . ID=gene-CCO53_RS15140;Name=CCO53_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15140;old_locus_tag=CCO53_15110 NZ_NPLZ01000008.1 Protein Homology CDS 52048 52467 . + 0 ID=cds-WP_001103154.1;Parent=gene-CCO53_RS15140;Dbxref=GenBank:WP_001103154.1;Name=WP_001103154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=CCO53_RS15140;product=DUF4751 family protein;protein_id=WP_001103154.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 52473 53168 . - . ID=gene-CCO53_RS15145;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO53_RS15145;old_locus_tag=CCO53_15115 NZ_NPLZ01000008.1 Protein Homology CDS 52473 53168 . - 0 ID=cds-WP_000888683.1;Parent=gene-CCO53_RS15145;Dbxref=GenBank:WP_000888683.1;Name=WP_000888683.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=CCO53_RS15145;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888683.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 53309 54811 . - . ID=gene-CCO53_RS15150;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=CCO53_RS15150;old_locus_tag=CCO53_15120 NZ_NPLZ01000008.1 Protein Homology CDS 53309 54811 . - 0 ID=cds-WP_000151692.1;Parent=gene-CCO53_RS15150;Dbxref=GenBank:WP_000151692.1;Name=WP_000151692.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=CCO53_RS15150;product=L-arabinose isomerase;protein_id=WP_000151692.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 54822 56531 . - . ID=gene-CCO53_RS15155;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=CCO53_RS15155;old_locus_tag=CCO53_15125 NZ_NPLZ01000008.1 Protein Homology CDS 54822 56531 . - 0 ID=cds-WP_000951824.1;Parent=gene-CCO53_RS15155;Dbxref=GenBank:WP_000951824.1;Name=WP_000951824.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=CCO53_RS15155;product=ribulokinase;protein_id=WP_000951824.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 56872 57717 . + . ID=gene-CCO53_RS15160;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=CCO53_RS15160;old_locus_tag=CCO53_15130 NZ_NPLZ01000008.1 Protein Homology CDS 56872 57717 . + 0 ID=cds-WP_000852387.1;Parent=gene-CCO53_RS15160;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=CCO53_RS15160;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 57836 58603 . + . ID=gene-CCO53_RS15165;Name=CCO53_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15165;old_locus_tag=CCO53_15135 NZ_NPLZ01000008.1 Protein Homology CDS 57836 58603 . + 0 ID=cds-WP_001148369.1;Parent=gene-CCO53_RS15165;Dbxref=GenBank:WP_001148369.1;Name=WP_001148369.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=CCO53_RS15165;product=DedA family protein;protein_id=WP_001148369.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 58642 59349 . - . ID=gene-CCO53_RS15170;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=CCO53_RS15170;old_locus_tag=CCO53_15140 NZ_NPLZ01000008.1 Protein Homology CDS 58642 59349 . - 0 ID=cds-WP_094887740.1;Parent=gene-CCO53_RS15170;Dbxref=GenBank:WP_094887740.1;Name=WP_094887740.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=CCO53_RS15170;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_094887740.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 59333 60943 . - . ID=gene-CCO53_RS15175;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=CCO53_RS15175;old_locus_tag=CCO53_15145 NZ_NPLZ01000008.1 Protein Homology CDS 59333 60943 . - 0 ID=cds-WP_000235642.1;Parent=gene-CCO53_RS15175;Dbxref=GenBank:WP_000235642.1;Name=WP_000235642.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=CCO53_RS15175;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235642.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 60919 61902 . - . ID=gene-CCO53_RS15180;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=CCO53_RS15180;old_locus_tag=CCO53_15150 NZ_NPLZ01000008.1 Protein Homology CDS 60919 61902 . - 0 ID=cds-WP_000915326.1;Parent=gene-CCO53_RS15180;Dbxref=GenBank:WP_000915326.1;Name=WP_000915326.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=CCO53_RS15180;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11 NZ_NPLZ01000008.1 cmsearch riboswitch 61934 62033 . - . ID=id-NZ_NPLZ01000008.1:61934..62033;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPLZ01000008.1 RefSeq gene 62080 63738 . - . ID=gene-CCO53_RS15185;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=CCO53_RS15185;old_locus_tag=CCO53_15155 NZ_NPLZ01000008.1 Protein Homology CDS 62080 63738 . - 0 ID=cds-WP_001139026.1;Parent=gene-CCO53_RS15185;Dbxref=GenBank:WP_001139026.1;Name=WP_001139026.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=CCO53_RS15185;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139026.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 63831 63953 . + . ID=gene-CCO53_RS15190;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=CCO53_RS15190;old_locus_tag=CCO53_15160 NZ_NPLZ01000008.1 Protein Homology CDS 63831 63953 . + 0 ID=cds-WP_001248755.1;Parent=gene-CCO53_RS15190;Dbxref=GenBank:WP_001248755.1;Name=WP_001248755.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=CCO53_RS15190;product=glucose uptake inhibitor SgrT;protein_id=WP_001248755.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 64289 64894 . - . ID=gene-CCO53_RS15195;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO53_RS15195;old_locus_tag=CCO53_15165 NZ_NPLZ01000008.1 Protein Homology CDS 64289 64894 . - 0 ID=cds-WP_000818267.1;Parent=gene-CCO53_RS15195;Dbxref=GenBank:WP_000818267.1;Name=WP_000818267.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=CCO53_RS15195;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818267.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 64905 66305 . - . ID=gene-CCO53_RS15200;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO53_RS15200;old_locus_tag=CCO53_15170 NZ_NPLZ01000008.1 Protein Homology CDS 64905 66305 . - 0 ID=cds-WP_001140632.1;Parent=gene-CCO53_RS15200;Dbxref=GenBank:WP_001140632.1;Name=WP_001140632.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=CCO53_RS15200;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140632.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 66308 67399 . - . ID=gene-CCO53_RS15205;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CCO53_RS15205;old_locus_tag=CCO53_15175 NZ_NPLZ01000008.1 Protein Homology CDS 66308 67399 . - 0 ID=cds-WP_094887741.1;Parent=gene-CCO53_RS15205;Dbxref=GenBank:WP_094887741.1;Name=WP_094887741.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=CCO53_RS15205;product=3-isopropylmalate dehydrogenase;protein_id=WP_094887741.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 67399 68970 . - . ID=gene-CCO53_RS15210;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=CCO53_RS15210;old_locus_tag=CCO53_15180 NZ_NPLZ01000008.1 Protein Homology CDS 67399 68970 . - 0 ID=cds-WP_000082819.1;Parent=gene-CCO53_RS15210;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=CCO53_RS15210;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 69058 69144 . - . ID=gene-CCO53_RS15215;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=CCO53_RS15215;old_locus_tag=CCO53_15185 NZ_NPLZ01000008.1 Protein Homology CDS 69058 69144 . - 0 ID=cds-WP_001575587.1;Parent=gene-CCO53_RS15215;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=CCO53_RS15215;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 69801 70745 . + . ID=gene-CCO53_RS15220;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=CCO53_RS15220;old_locus_tag=CCO53_15190 NZ_NPLZ01000008.1 Protein Homology CDS 69801 70745 . + 0 ID=cds-WP_001115420.1;Parent=gene-CCO53_RS15220;Dbxref=GenBank:WP_001115420.1;Name=WP_001115420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=CCO53_RS15220;product=transcriptional regulator LeuO;protein_id=WP_001115420.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 71067 72791 . + . ID=gene-CCO53_RS15225;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=CCO53_RS15225;old_locus_tag=CCO53_15195 NZ_NPLZ01000008.1 Protein Homology CDS 71067 72791 . + 0 ID=cds-WP_000425612.1;Parent=gene-CCO53_RS15225;Dbxref=GenBank:WP_000425612.1;Name=WP_000425612.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=CCO53_RS15225;product=acetolactate synthase 3 large subunit;protein_id=WP_000425612.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 72794 73285 . + . ID=gene-CCO53_RS15230;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO53_RS15230;old_locus_tag=CCO53_15200 NZ_NPLZ01000008.1 Protein Homology CDS 72794 73285 . + 0 ID=cds-WP_001563086.1;Parent=gene-CCO53_RS15230;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=CCO53_RS15230;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 73569 74573 . + . ID=gene-CCO53_RS15235;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=CCO53_RS15235;old_locus_tag=CCO53_15205 NZ_NPLZ01000008.1 Protein Homology CDS 73569 74573 . + 0 ID=cds-WP_000762406.1;Parent=gene-CCO53_RS15235;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=CCO53_RS15235;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 75179 75637 . + . ID=gene-CCO53_RS15240;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CCO53_RS15240;old_locus_tag=CCO53_15210 NZ_NPLZ01000008.1 Protein Homology CDS 75179 75637 . + 0 ID=cds-WP_000488294.1;Parent=gene-CCO53_RS15240;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=CCO53_RS15240;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 75639 76580 . + . ID=gene-CCO53_RS15245;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CCO53_RS15245;old_locus_tag=CCO53_15215 NZ_NPLZ01000008.1 Protein Homology CDS 75639 76580 . + 0 ID=cds-WP_000970444.1;Parent=gene-CCO53_RS15245;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=CCO53_RS15245;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 76577 76942 . + . ID=gene-CCO53_RS15250;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CCO53_RS15250;old_locus_tag=CCO53_15220 NZ_NPLZ01000008.1 Protein Homology CDS 76577 76942 . + 0 ID=cds-WP_000625651.1;Parent=gene-CCO53_RS15250;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=CCO53_RS15250;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 76958 78724 . + . ID=gene-CCO53_RS15255;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO53_RS15255;old_locus_tag=CCO53_15225 NZ_NPLZ01000008.1 Protein Homology CDS 76958 78724 . + 0 ID=cds-WP_000642235.1;Parent=gene-CCO53_RS15255;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=CCO53_RS15255;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 78711 80198 . + . ID=gene-CCO53_RS15260;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=CCO53_RS15260;old_locus_tag=CCO53_15230 NZ_NPLZ01000008.1 Protein Homology CDS 78711 80198 . + 0 ID=cds-WP_023231565.1;Parent=gene-CCO53_RS15260;Dbxref=GenBank:WP_023231565.1;Name=WP_023231565.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=CCO53_RS15260;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_023231565.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 80195 81553 . + . ID=gene-CCO53_RS15265;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=CCO53_RS15265;old_locus_tag=CCO53_15235 NZ_NPLZ01000008.1 Protein Homology CDS 80195 81553 . + 0 ID=cds-WP_094887742.1;Parent=gene-CCO53_RS15265;Dbxref=GenBank:WP_094887742.1;Name=WP_094887742.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=CCO53_RS15265;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_094887742.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 81547 82629 . + . ID=gene-CCO53_RS15270;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CCO53_RS15270;old_locus_tag=CCO53_15240 NZ_NPLZ01000008.1 Protein Homology CDS 81547 82629 . + 0 ID=cds-WP_000964138.1;Parent=gene-CCO53_RS15270;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=CCO53_RS15270;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 82632 83948 . + . ID=gene-CCO53_RS15275;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CCO53_RS15275;old_locus_tag=CCO53_15245 NZ_NPLZ01000008.1 Protein Homology CDS 82632 83948 . + 0 ID=cds-WP_000796443.1;Parent=gene-CCO53_RS15275;Dbxref=GenBank:WP_000796443.1;Name=WP_000796443.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=CCO53_RS15275;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796443.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 83948 85192 . + . ID=gene-CCO53_RS15280;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CCO53_RS15280;old_locus_tag=CCO53_15250 NZ_NPLZ01000008.1 Protein Homology CDS 83948 85192 . + 0 ID=cds-WP_001239803.1;Parent=gene-CCO53_RS15280;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=CCO53_RS15280;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 85189 86256 . + . ID=gene-CCO53_RS15285;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CCO53_RS15285;old_locus_tag=CCO53_15255 NZ_NPLZ01000008.1 Protein Homology CDS 85189 86256 . + 0 ID=cds-WP_000016617.1;Parent=gene-CCO53_RS15285;Dbxref=GenBank:WP_000016617.1;Name=WP_000016617.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=CCO53_RS15285;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016617.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 86375 87850 . + . ID=gene-CCO53_RS15290;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CCO53_RS15290;old_locus_tag=CCO53_15260 NZ_NPLZ01000008.1 Protein Homology CDS 86375 87850 . + 0 ID=cds-WP_001096072.1;Parent=gene-CCO53_RS15290;Dbxref=GenBank:WP_001096072.1;Name=WP_001096072.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=CCO53_RS15290;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096072.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 87843 88763 . + . ID=gene-CCO53_RS15295;Name=CCO53_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15295;old_locus_tag=CCO53_15265 NZ_NPLZ01000008.1 Protein Homology CDS 87843 88763 . + 0 ID=cds-WP_000763903.1;Parent=gene-CCO53_RS15295;Dbxref=GenBank:WP_000763903.1;Name=WP_000763903.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=CCO53_RS15295;product=D-alanine--D-alanine ligase;protein_id=WP_000763903.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 88765 89595 . + . ID=gene-CCO53_RS15300;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=CCO53_RS15300;old_locus_tag=CCO53_15270 NZ_NPLZ01000008.1 Protein Homology CDS 88765 89595 . + 0 ID=cds-WP_000075728.1;Parent=gene-CCO53_RS15300;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=CCO53_RS15300;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 89592 90854 . + . ID=gene-CCO53_RS15305;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CCO53_RS15305;old_locus_tag=CCO53_15275 NZ_NPLZ01000008.1 Protein Homology CDS 89592 90854 . + 0 ID=cds-WP_000588463.1;Parent=gene-CCO53_RS15305;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=CCO53_RS15305;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 90915 92066 . + . ID=gene-CCO53_RS15310;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CCO53_RS15310;old_locus_tag=CCO53_15280 NZ_NPLZ01000008.1 Protein Homology CDS 90915 92066 . + 0 ID=cds-WP_000462785.1;Parent=gene-CCO53_RS15310;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=CCO53_RS15310;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 92167 93084 . + . ID=gene-CCO53_RS15315;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=CCO53_RS15315;old_locus_tag=CCO53_15285 NZ_NPLZ01000008.1 Protein Homology CDS 92167 93084 . + 0 ID=cds-WP_000595487.1;Parent=gene-CCO53_RS15315;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=CCO53_RS15315;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 93651 94937 . + . ID=gene-CCO53_RS15320;Name=CCO53_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15320;old_locus_tag=CCO53_15290 NZ_NPLZ01000008.1 Protein Homology CDS 93651 94937 . + 0 ID=cds-WP_058331376.1;Parent=gene-CCO53_RS15320;Dbxref=GenBank:WP_058331376.1;Name=WP_058331376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946684.1;locus_tag=CCO53_RS15320;product=hypothetical protein;protein_id=WP_058331376.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq pseudogene 94950 95115 . + . ID=gene-CCO53_RS24070;Name=CCO53_RS24070;end_range=95115,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24070;partial=true;pseudo=true;start_range=.,94950 NZ_NPLZ01000008.1 Protein Homology CDS 94950 95115 . + 0 ID=cds-CCO53_RS24070;Parent=gene-CCO53_RS24070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0008686;end_range=95115,.;gbkey=CDS;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666802.1;locus_tag=CCO53_RS24070;partial=true;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;pseudo=true;start_range=.,94950;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 95509 96006 . + . ID=gene-CCO53_RS15330;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=CCO53_RS15330;old_locus_tag=CCO53_15300 NZ_NPLZ01000008.1 Protein Homology CDS 95509 96006 . + 0 ID=cds-WP_000014333.1;Parent=gene-CCO53_RS15330;Dbxref=GenBank:WP_000014333.1;Name=WP_000014333.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=CCO53_RS15330;product=secA translation cis-regulator SecM;protein_id=WP_000014333.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 96068 98773 . + . ID=gene-CCO53_RS15335;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CCO53_RS15335;old_locus_tag=CCO53_15305 NZ_NPLZ01000008.1 Protein Homology CDS 96068 98773 . + 0 ID=cds-WP_000905756.1;Parent=gene-CCO53_RS15335;Dbxref=GenBank:WP_000905756.1;Name=WP_000905756.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=CCO53_RS15335;product=preprotein translocase subunit SecA;protein_id=WP_000905756.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 98929 99324 . + . ID=gene-CCO53_RS15340;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=CCO53_RS15340;old_locus_tag=CCO53_15310 NZ_NPLZ01000008.1 Protein Homology CDS 98929 99324 . + 0 ID=cds-WP_000736055.1;Parent=gene-CCO53_RS15340;Dbxref=GenBank:WP_000736055.1;Name=WP_000736055.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=CCO53_RS15340;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736055.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq pseudogene 99358 99510 . - . ID=gene-CCO53_RS24075;Name=CCO53_RS24075;end_range=99510,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24075;old_locus_tag=CCO53_15315;partial=true;pseudo=true NZ_NPLZ01000008.1 Protein Homology CDS 99358 99510 . - 0 ID=cds-CCO53_RS24075;Parent=gene-CCO53_RS24075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=99510,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=CCO53_RS24075;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_NPLZ01000008.1 RefSeq pseudogene 99537 99650 . + . ID=gene-CCO53_RS15350;Name=CCO53_RS15350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS15350;old_locus_tag=CCO53_15320;partial=true;pseudo=true;start_range=.,99537 NZ_NPLZ01000008.1 Protein Homology CDS 99537 99650 . + 0 ID=cds-CCO53_RS15350;Parent=gene-CCO53_RS15350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894003.1;locus_tag=CCO53_RS15350;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,99537;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 99647 99838 . - . ID=gene-CCO53_RS15355;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=CCO53_RS15355;old_locus_tag=CCO53_15325 NZ_NPLZ01000008.1 Protein Homology CDS 99647 99838 . - 0 ID=cds-WP_001286419.1;Parent=gene-CCO53_RS15355;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=CCO53_RS15355;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 99848 100591 . - . ID=gene-CCO53_RS15360;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=CCO53_RS15360;old_locus_tag=CCO53_15330 NZ_NPLZ01000008.1 Protein Homology CDS 99848 100591 . - 0 ID=cds-WP_023194214.1;Parent=gene-CCO53_RS15360;Dbxref=GenBank:WP_023194214.1;Name=WP_023194214.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=CCO53_RS15360;product=cell division protein ZapD;protein_id=WP_023194214.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 100591 101211 . - . ID=gene-CCO53_RS15365;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CCO53_RS15365;old_locus_tag=CCO53_15335 NZ_NPLZ01000008.1 Protein Homology CDS 100591 101211 . - 0 ID=cds-WP_001270913.1;Parent=gene-CCO53_RS15365;Dbxref=GenBank:WP_001270913.1;Name=WP_001270913.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=CCO53_RS15365;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 101437 102480 . + . ID=gene-CCO53_RS15370;Name=CCO53_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15370;old_locus_tag=CCO53_15340 NZ_NPLZ01000008.1 Protein Homology CDS 101437 102480 . + 0 ID=cds-WP_001217365.1;Parent=gene-CCO53_RS15370;Dbxref=GenBank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=CCO53_RS15370;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 102511 103713 . - . ID=gene-CCO53_RS15375;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=CCO53_RS15375;old_locus_tag=CCO53_15345 NZ_NPLZ01000008.1 Protein Homology CDS 102511 103713 . - 0 ID=cds-WP_023260260.1;Parent=gene-CCO53_RS15375;Dbxref=GenBank:WP_023260260.1;Name=WP_023260260.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=CCO53_RS15375;product=protein transport protein HofC;protein_id=WP_023260260.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 103703 105088 . - . ID=gene-CCO53_RS15380;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=CCO53_RS15380;old_locus_tag=CCO53_15350 NZ_NPLZ01000008.1 Protein Homology CDS 103703 105088 . - 0 ID=cds-WP_058331375.1;Parent=gene-CCO53_RS15380;Dbxref=GenBank:WP_058331375.1;Name=WP_058331375.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=CCO53_RS15380;product=type II secretion system protein GspE;protein_id=WP_058331375.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 105098 105535 . - . ID=gene-CCO53_RS15385;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=CCO53_RS15385;old_locus_tag=CCO53_15355 NZ_NPLZ01000008.1 Protein Homology CDS 105098 105535 . - 0 ID=cds-WP_000414982.1;Parent=gene-CCO53_RS15385;Dbxref=GenBank:WP_000414982.1;Name=WP_000414982.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=CCO53_RS15385;product=prepilin peptidase-dependent pilin;protein_id=WP_000414982.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 105757 106650 . - . ID=gene-CCO53_RS15395;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CCO53_RS15395;old_locus_tag=CCO53_15365 NZ_NPLZ01000008.1 Protein Homology CDS 105757 106650 . - 0 ID=cds-WP_001135136.1;Parent=gene-CCO53_RS15395;Dbxref=GenBank:WP_001135136.1;Name=WP_001135136.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308140.1;locus_tag=CCO53_RS15395;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135136.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 106738 107301 . + . ID=gene-CCO53_RS15400;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=CCO53_RS15400;old_locus_tag=CCO53_15370 NZ_NPLZ01000008.1 Protein Homology CDS 106738 107301 . + 0 ID=cds-WP_000936326.1;Parent=gene-CCO53_RS15400;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=CCO53_RS15400;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 107298 108152 . + . ID=gene-CCO53_RS15405;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=CCO53_RS15405;old_locus_tag=CCO53_15375 NZ_NPLZ01000008.1 Protein Homology CDS 107298 108152 . + 0 ID=cds-WP_000172039.1;Parent=gene-CCO53_RS15405;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=CCO53_RS15405;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 108244 109194 . - . ID=gene-CCO53_RS15410;Name=CCO53_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15410;old_locus_tag=CCO53_15380 NZ_NPLZ01000008.1 Protein Homology CDS 108244 109194 . - 0 ID=cds-WP_000024767.1;Parent=gene-CCO53_RS15410;Dbxref=GenBank:WP_000024767.1;Name=WP_000024767.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=CCO53_RS15410;product=glycoside hydrolase family 43 protein;protein_id=WP_000024767.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 109194 110600 . - . ID=gene-CCO53_RS15415;Name=CCO53_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15415;old_locus_tag=CCO53_15385 NZ_NPLZ01000008.1 Protein Homology CDS 109194 110600 . - 0 ID=cds-WP_000357539.1;Parent=gene-CCO53_RS15415;Dbxref=GenBank:WP_000357539.1;Name=WP_000357539.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=CCO53_RS15415;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_000357539.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 110764 112137 . - . ID=gene-CCO53_RS15420;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=CCO53_RS15420;old_locus_tag=CCO53_15390 NZ_NPLZ01000008.1 Protein Homology CDS 110764 112137 . - 0 ID=cds-WP_001539002.1;Parent=gene-CCO53_RS15420;Dbxref=GenBank:WP_001539002.1;Name=WP_001539002.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=CCO53_RS15420;product=aromatic amino acid transporter AroP;protein_id=WP_001539002.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 112700 113464 . + . ID=gene-CCO53_RS15425;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=CCO53_RS15425;old_locus_tag=CCO53_15395 NZ_NPLZ01000008.1 Protein Homology CDS 112700 113464 . + 0 ID=cds-WP_000331771.1;Parent=gene-CCO53_RS15425;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=CCO53_RS15425;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 113771 116434 . + . ID=gene-CCO53_RS15435;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=CCO53_RS15435;old_locus_tag=CCO53_15405 NZ_NPLZ01000008.1 Protein Homology CDS 113771 116434 . + 0 ID=cds-WP_000003841.1;Parent=gene-CCO53_RS15435;Dbxref=GenBank:WP_000003841.1;Name=WP_000003841.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=CCO53_RS15435;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003841.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 116449 118338 . + . ID=gene-CCO53_RS15440;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=CCO53_RS15440;old_locus_tag=CCO53_15410 NZ_NPLZ01000008.1 Protein Homology CDS 116449 118338 . + 0 ID=cds-WP_094882545.1;Parent=gene-CCO53_RS15440;Dbxref=GenBank:WP_094882545.1;Name=WP_094882545.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=CCO53_RS15440;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_094882545.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 118540 119964 . + . ID=gene-CCO53_RS15445;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CCO53_RS15445;old_locus_tag=CCO53_15415 NZ_NPLZ01000008.1 Protein Homology CDS 118540 119964 . + 0 ID=cds-WP_001537804.1;Parent=gene-CCO53_RS15445;Dbxref=GenBank:WP_001537804.1;Name=WP_001537804.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=CCO53_RS15445;product=dihydrolipoyl dehydrogenase;protein_id=WP_001537804.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 120253 120537 . + . ID=gene-CCO53_RS15450;Name=CCO53_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15450;old_locus_tag=CCO53_15420 NZ_NPLZ01000008.1 Protein Homology CDS 120253 120537 . + 0 ID=cds-WP_017465627.1;Parent=gene-CCO53_RS15450;Dbxref=GenBank:WP_017465627.1;Name=WP_017465627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=CCO53_RS15450;product=hypothetical protein;protein_id=WP_017465627.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 120575 121366 . - . ID=gene-CCO53_RS15455;Name=CCO53_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15455;old_locus_tag=CCO53_15425 NZ_NPLZ01000008.1 Protein Homology CDS 120575 121366 . - 0 ID=cds-WP_000757452.1;Parent=gene-CCO53_RS15455;Dbxref=GenBank:WP_000757452.1;Name=WP_000757452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=CCO53_RS15455;product=DUF2950 family protein;protein_id=WP_000757452.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 121379 123007 . - . ID=gene-CCO53_RS15460;Name=CCO53_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15460;old_locus_tag=CCO53_15430 NZ_NPLZ01000008.1 Protein Homology CDS 121379 123007 . - 0 ID=cds-WP_094882546.1;Parent=gene-CCO53_RS15460;Dbxref=GenBank:WP_094882546.1;Name=WP_094882546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=CCO53_RS15460;product=DUF3300 domain-containing protein;protein_id=WP_094882546.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 123396 125993 . + . ID=gene-CCO53_RS15465;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=CCO53_RS15465;old_locus_tag=CCO53_15435 NZ_NPLZ01000008.1 Protein Homology CDS 123396 125993 . + 0 ID=cds-WP_000888952.1;Parent=gene-CCO53_RS15465;Dbxref=GenBank:WP_000888952.1;Name=WP_000888952.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459163.1;locus_tag=CCO53_RS15465;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_000888952.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 126033 126497 . - . ID=gene-CCO53_RS15470;Name=CCO53_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15470;old_locus_tag=CCO53_15440 NZ_NPLZ01000008.1 Protein Homology CDS 126033 126497 . - 0 ID=cds-WP_080198401.1;Parent=gene-CCO53_RS15470;Dbxref=GenBank:WP_080198401.1;Name=WP_080198401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=CCO53_RS15470;product=hypothetical protein;protein_id=WP_080198401.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 126907 127230 . - . ID=gene-CCO53_RS15475;Name=CCO53_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15475;old_locus_tag=CCO53_15445 NZ_NPLZ01000008.1 Protein Homology CDS 126907 127230 . - 0 ID=cds-WP_001101536.1;Parent=gene-CCO53_RS15475;Dbxref=GenBank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=CCO53_RS15475;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101536.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 127501 127863 . + . ID=gene-CCO53_RS15480;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=CCO53_RS15480;old_locus_tag=CCO53_15450 NZ_NPLZ01000008.1 Protein Homology CDS 127501 127863 . + 0 ID=cds-WP_000384308.1;Parent=gene-CCO53_RS15480;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=CCO53_RS15480;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 128098 129051 . + . ID=gene-CCO53_RS15485;Name=CCO53_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15485;old_locus_tag=CCO53_15455 NZ_NPLZ01000008.1 Protein Homology CDS 128098 129051 . + 0 ID=cds-WP_001022089.1;Parent=gene-CCO53_RS15485;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=CCO53_RS15485;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 129048 130319 . + . ID=gene-CCO53_RS15490;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=CCO53_RS15490;old_locus_tag=CCO53_15460 NZ_NPLZ01000008.1 Protein Homology CDS 129048 130319 . + 0 ID=cds-WP_061372040.1;Parent=gene-CCO53_RS15490;Dbxref=GenBank:WP_061372040.1;Name=WP_061372040.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=CCO53_RS15490;product=D-threonate kinase;protein_id=WP_061372040.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 130309 131292 . + . ID=gene-CCO53_RS15495;Name=CCO53_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15495;old_locus_tag=CCO53_15465 NZ_NPLZ01000008.1 Protein Homology CDS 130309 131292 . + 0 ID=cds-WP_094887744.1;Parent=gene-CCO53_RS15495;Dbxref=GenBank:WP_094887744.1;Name=WP_094887744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=CCO53_RS15495;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_094887744.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 131302 132069 . + . ID=gene-CCO53_RS15500;Name=CCO53_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15500;old_locus_tag=CCO53_15470 NZ_NPLZ01000008.1 Protein Homology CDS 131302 132069 . + 0 ID=cds-WP_000678254.1;Parent=gene-CCO53_RS15500;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=CCO53_RS15500;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 132099 132893 . - . ID=gene-CCO53_RS15505;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=CCO53_RS15505;old_locus_tag=CCO53_15475 NZ_NPLZ01000008.1 Protein Homology CDS 132099 132893 . - 0 ID=cds-WP_000734276.1;Parent=gene-CCO53_RS15505;Dbxref=GenBank:WP_000734276.1;Name=WP_000734276.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=CCO53_RS15505;product=adenosylmethionine decarboxylase;protein_id=WP_000734276.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 132914 133774 . - . ID=gene-CCO53_RS15510;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=CCO53_RS15510;old_locus_tag=CCO53_15480 NZ_NPLZ01000008.1 Protein Homology CDS 132914 133774 . - 0 ID=cds-WP_001534394.1;Parent=gene-CCO53_RS15510;Dbxref=GenBank:WP_001534394.1;Name=WP_001534394.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=CCO53_RS15510;product=polyamine aminopropyltransferase;protein_id=WP_001534394.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 133881 134228 . - . ID=gene-CCO53_RS15515;Name=CCO53_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15515;old_locus_tag=CCO53_15485 NZ_NPLZ01000008.1 Protein Homology CDS 133881 134228 . - 0 ID=cds-WP_000846613.1;Parent=gene-CCO53_RS15515;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=CCO53_RS15515;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 134430 136040 . + . ID=gene-CCO53_RS15520;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=CCO53_RS15520;old_locus_tag=CCO53_15490 NZ_NPLZ01000008.1 Protein Homology CDS 134430 136040 . + 0 ID=cds-WP_058331372.1;Parent=gene-CCO53_RS15520;Dbxref=GenBank:WP_058331372.1;Name=WP_058331372.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=CCO53_RS15520;product=multicopper oxidase CueO;protein_id=WP_058331372.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 136118 138508 . - . ID=gene-CCO53_RS15525;Name=CCO53_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15525;old_locus_tag=CCO53_15495 NZ_NPLZ01000008.1 Protein Homology CDS 136118 138508 . - 0 ID=cds-WP_094887745.1;Parent=gene-CCO53_RS15525;Dbxref=GenBank:WP_094887745.1;Name=WP_094887745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=CCO53_RS15525;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_094887745.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 138714 139250 . + . ID=gene-CCO53_RS15530;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CCO53_RS15530;old_locus_tag=CCO53_15500 NZ_NPLZ01000008.1 Protein Homology CDS 138714 139250 . + 0 ID=cds-WP_000683342.1;Parent=gene-CCO53_RS15530;Dbxref=GenBank:WP_000683342.1;Name=WP_000683342.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=CCO53_RS15530;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683342.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 139308 139970 . - . ID=gene-CCO53_RS15535;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=CCO53_RS15535;old_locus_tag=CCO53_15505 NZ_NPLZ01000008.1 Protein Homology CDS 139308 139970 . - 0 ID=cds-WP_000651590.1;Parent=gene-CCO53_RS15535;Dbxref=GenBank:WP_000651590.1;Name=WP_000651590.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=CCO53_RS15535;product=carbonate dehydratase;protein_id=WP_000651590.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 140079 141005 . + . ID=gene-CCO53_RS15540;Name=CCO53_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15540;old_locus_tag=CCO53_15510 NZ_NPLZ01000008.1 Protein Homology CDS 140079 141005 . + 0 ID=cds-WP_000150628.1;Parent=gene-CCO53_RS15540;Dbxref=GenBank:WP_000150628.1;Name=WP_000150628.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=CCO53_RS15540;product=ABC transporter ATP-binding protein;protein_id=WP_000150628.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 141002 141772 . + . ID=gene-CCO53_RS15545;Name=CCO53_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15545;old_locus_tag=CCO53_15515 NZ_NPLZ01000008.1 Protein Homology CDS 141002 141772 . + 0 ID=cds-WP_000983418.1;Parent=gene-CCO53_RS15545;Dbxref=GenBank:WP_000983418.1;Name=WP_000983418.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=CCO53_RS15545;product=ABC transporter permease;protein_id=WP_000983418.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 141889 142968 . - . ID=gene-CCO53_RS15550;Name=CCO53_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15550;old_locus_tag=CCO53_15520 NZ_NPLZ01000008.1 Protein Homology CDS 141889 142968 . - 0 ID=cds-WP_000794043.1;Parent=gene-CCO53_RS15550;Dbxref=GenBank:WP_000794043.1;Name=WP_000794043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=CCO53_RS15550;product=fimbrial protein;protein_id=WP_000794043.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 142977 145523 . - . ID=gene-CCO53_RS15555;Name=CCO53_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15555;old_locus_tag=CCO53_15525 NZ_NPLZ01000008.1 Protein Homology CDS 142977 145523 . - 0 ID=cds-WP_058331370.1;Parent=gene-CCO53_RS15555;Dbxref=GenBank:WP_058331370.1;Name=WP_058331370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=CCO53_RS15555;product=fimbrial outer membrane usher protein;protein_id=WP_058331370.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 145550 146233 . - . ID=gene-CCO53_RS15560;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=CCO53_RS15560;old_locus_tag=CCO53_15530 NZ_NPLZ01000008.1 Protein Homology CDS 145550 146233 . - 0 ID=cds-WP_001086405.1;Parent=gene-CCO53_RS15560;Dbxref=GenBank:WP_001086405.1;Name=WP_001086405.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=CCO53_RS15560;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086405.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 146281 146814 . - . ID=gene-CCO53_RS15565;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=CCO53_RS15565;old_locus_tag=CCO53_15535 NZ_NPLZ01000008.1 Protein Homology CDS 146281 146814 . - 0 ID=cds-WP_000779125.1;Parent=gene-CCO53_RS15565;Dbxref=GenBank:WP_000779125.1;Name=WP_000779125.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=CCO53_RS15565;product=Sti fimbria major subunit StiA;protein_id=WP_000779125.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 147184 147624 . + . ID=gene-CCO53_RS15570;Name=CCO53_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15570;old_locus_tag=CCO53_15540 NZ_NPLZ01000008.1 Protein Homology CDS 147184 147624 . + 0 ID=cds-WP_058331369.1;Parent=gene-CCO53_RS15570;Dbxref=GenBank:WP_058331369.1;Name=WP_058331369.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=CCO53_RS15570;product=PTS sugar transporter subunit IIA;protein_id=WP_058331369.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 147686 148915 . + . ID=gene-CCO53_RS15575;Name=CCO53_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15575;old_locus_tag=CCO53_15545 NZ_NPLZ01000008.1 Protein Homology CDS 147686 148915 . + 0 ID=cds-WP_000245316.1;Parent=gene-CCO53_RS15575;Dbxref=GenBank:WP_000245316.1;Name=WP_000245316.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=CCO53_RS15575;product=polysaccharide deacetylase family protein;protein_id=WP_000245316.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 148922 149302 . - . ID=gene-CCO53_RS15580;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CCO53_RS15580;old_locus_tag=CCO53_15550 NZ_NPLZ01000008.1 Protein Homology CDS 148922 149302 . - 0 ID=cds-WP_000621526.1;Parent=gene-CCO53_RS15580;Dbxref=GenBank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=CCO53_RS15580;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 149397 150251 . - . ID=gene-CCO53_RS15590;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CCO53_RS15590;old_locus_tag=CCO53_15560 NZ_NPLZ01000008.1 Protein Homology CDS 149397 150251 . - 0 ID=cds-WP_000905350.1;Parent=gene-CCO53_RS15590;Dbxref=GenBank:WP_000905350.1;Name=WP_000905350.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=CCO53_RS15590;product=pantoate--beta-alanine ligase;protein_id=WP_000905350.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 150377 151168 . - . ID=gene-CCO53_RS15595;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CCO53_RS15595;old_locus_tag=CCO53_15565 NZ_NPLZ01000008.1 Protein Homology CDS 150377 151168 . - 0 ID=cds-WP_000805489.1;Parent=gene-CCO53_RS15595;Dbxref=GenBank:WP_000805489.1;Name=WP_000805489.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=CCO53_RS15595;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805489.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 151289 151768 . - . ID=gene-CCO53_RS15600;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CCO53_RS15600;old_locus_tag=CCO53_15570 NZ_NPLZ01000008.1 Protein Homology CDS 151289 151768 . - 0 ID=cds-WP_000150777.1;Parent=gene-CCO53_RS15600;Dbxref=GenBank:WP_000150777.1;Name=WP_000150777.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=CCO53_RS15600;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150777.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 151765 153162 . - . ID=gene-CCO53_RS15605;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=CCO53_RS15605;old_locus_tag=CCO53_15575 NZ_NPLZ01000008.1 Protein Homology CDS 151765 153162 . - 0 ID=cds-WP_204355897.1;Parent=gene-CCO53_RS15605;Dbxref=GenBank:WP_204355897.1;Name=WP_204355897.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=CCO53_RS15605;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204355897.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 153324 154220 . - . ID=gene-CCO53_RS15610;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=CCO53_RS15610;old_locus_tag=CCO53_15580 NZ_NPLZ01000008.1 Protein Homology CDS 153324 154220 . - 0 ID=cds-WP_000132297.1;Parent=gene-CCO53_RS15610;Dbxref=GenBank:WP_000132297.1;Name=WP_000132297.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=CCO53_RS15610;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_000132297.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 154289 154744 . - . ID=gene-CCO53_RS15615;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=CCO53_RS15615;old_locus_tag=CCO53_15585 NZ_NPLZ01000008.1 Protein Homology CDS 154289 154744 . - 0 ID=cds-WP_001155232.1;Parent=gene-CCO53_RS15615;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=CCO53_RS15615;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 154921 155625 . - . ID=gene-CCO53_RS15620;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=CCO53_RS15620;old_locus_tag=CCO53_15590 NZ_NPLZ01000008.1 Protein Homology CDS 154921 155625 . - 0 ID=cds-WP_000899408.1;Parent=gene-CCO53_RS15620;Dbxref=GenBank:WP_000899408.1;Name=WP_000899408.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=CCO53_RS15620;product=DNA/RNA nuclease SfsA;protein_id=WP_000899408.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 155642 156172 . - . ID=gene-CCO53_RS15625;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=CCO53_RS15625;old_locus_tag=CCO53_15595 NZ_NPLZ01000008.1 Protein Homology CDS 155642 156172 . - 0 ID=cds-WP_001294178.1;Parent=gene-CCO53_RS15625;Dbxref=GenBank:WP_001294178.1;Name=WP_001294178.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=CCO53_RS15625;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294178.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 156245 158674 . + . ID=gene-CCO53_RS15630;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=CCO53_RS15630;old_locus_tag=CCO53_15600 NZ_NPLZ01000008.1 Protein Homology CDS 156245 158674 . + 0 ID=cds-WP_024146197.1;Parent=gene-CCO53_RS15630;Dbxref=GenBank:WP_024146197.1;Name=WP_024146197.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=CCO53_RS15630;product=ATP-dependent helicase HrpB;protein_id=WP_024146197.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 158815 161337 . + . ID=gene-CCO53_RS15635;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=CCO53_RS15635;old_locus_tag=CCO53_15605 NZ_NPLZ01000008.1 Protein Homology CDS 158815 161337 . + 0 ID=cds-WP_000918122.1;Parent=gene-CCO53_RS15635;Dbxref=GenBank:WP_000918122.1;Name=WP_000918122.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=CCO53_RS15635;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918122.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 161630 163819 . + . ID=gene-CCO53_RS15640;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=CCO53_RS15640;old_locus_tag=CCO53_15610 NZ_NPLZ01000008.1 Protein Homology CDS 161630 163819 . + 0 ID=cds-WP_000113219.1;Parent=gene-CCO53_RS15640;Dbxref=GenBank:WP_000113219.1;Name=WP_000113219.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=CCO53_RS15640;product=ferrichrome porin FhuA;protein_id=WP_000113219.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 163868 164665 . + . ID=gene-CCO53_RS15645;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=CCO53_RS15645;old_locus_tag=CCO53_15615 NZ_NPLZ01000008.1 Protein Homology CDS 163868 164665 . + 0 ID=cds-WP_023254680.1;Parent=gene-CCO53_RS15645;Dbxref=GenBank:WP_023254680.1;Name=WP_023254680.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=CCO53_RS15645;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_023254680.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 164665 165555 . + . ID=gene-CCO53_RS15650;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=CCO53_RS15650;old_locus_tag=CCO53_15620 NZ_NPLZ01000008.1 Protein Homology CDS 164665 165555 . + 0 ID=cds-WP_001205359.1;Parent=gene-CCO53_RS15650;Dbxref=GenBank:WP_001205359.1;Name=WP_001205359.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=CCO53_RS15650;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001205359.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 165570 167609 . + . ID=gene-CCO53_RS15655;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=CCO53_RS15655;old_locus_tag=CCO53_15625 NZ_NPLZ01000008.1 Protein Homology CDS 165570 167609 . + 0 ID=cds-WP_094887746.1;Parent=gene-CCO53_RS15655;Dbxref=GenBank:WP_094887746.1;Name=WP_094887746.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=CCO53_RS15655;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_094887746.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 167645 167959 . + . ID=gene-CCO53_RS15660;Name=CCO53_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15660;old_locus_tag=CCO53_15630 NZ_NPLZ01000008.1 GeneMarkS-2+ CDS 167645 167959 . + 0 ID=cds-WP_139775314.1;Parent=gene-CCO53_RS15660;Dbxref=GenBank:WP_139775314.1;Name=WP_139775314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO53_RS15660;product=hypothetical protein;protein_id=WP_139775314.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 168550 169110 . + . ID=gene-CCO53_RS15665;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=CCO53_RS15665;old_locus_tag=CCO53_15635 NZ_NPLZ01000008.1 Protein Homology CDS 168550 169110 . + 0 ID=cds-WP_001090554.1;Parent=gene-CCO53_RS15665;Dbxref=GenBank:WP_001090554.1;Name=WP_001090554.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=CCO53_RS15665;product=fimbrial major subunit StfA;protein_id=WP_001090554.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 169196 171853 . + . ID=gene-CCO53_RS15670;Name=CCO53_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15670;old_locus_tag=CCO53_15640 NZ_NPLZ01000008.1 Protein Homology CDS 169196 171853 . + 0 ID=cds-WP_058331364.1;Parent=gene-CCO53_RS15670;Dbxref=GenBank:WP_058331364.1;Name=WP_058331364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=CCO53_RS15670;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_058331364.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 171871 172623 . + . ID=gene-CCO53_RS15675;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=CCO53_RS15675;old_locus_tag=CCO53_15645 NZ_NPLZ01000008.1 Protein Homology CDS 171871 172623 . + 0 ID=cds-WP_000982719.1;Parent=gene-CCO53_RS15675;Dbxref=GenBank:WP_000982719.1;Name=WP_000982719.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=CCO53_RS15675;product=fimbrial chaperone StfD;protein_id=WP_000982719.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 172642 173154 . + . ID=gene-CCO53_RS15680;Name=CCO53_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15680;old_locus_tag=CCO53_15650 NZ_NPLZ01000008.1 Protein Homology CDS 172642 173154 . + 0 ID=cds-WP_001250313.1;Parent=gene-CCO53_RS15680;Dbxref=GenBank:WP_001250313.1;Name=WP_001250313.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=CCO53_RS15680;product=fimbrial protein;protein_id=WP_001250313.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 173151 173627 . + . ID=gene-CCO53_RS15685;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=CCO53_RS15685;old_locus_tag=CCO53_15655 NZ_NPLZ01000008.1 Protein Homology CDS 173151 173627 . + 0 ID=cds-WP_000738038.1;Parent=gene-CCO53_RS15685;Dbxref=GenBank:WP_000738038.1;Name=WP_000738038.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=CCO53_RS15685;product=fimbrial minor subunit StfF;protein_id=WP_000738038.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 173627 174157 . + . ID=gene-CCO53_RS15690;Name=CCO53_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15690;old_locus_tag=CCO53_15660 NZ_NPLZ01000008.1 Protein Homology CDS 173627 174157 . + 0 ID=cds-WP_001129321.1;Parent=gene-CCO53_RS15690;Dbxref=GenBank:WP_001129321.1;Name=WP_001129321.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=CCO53_RS15690;product=fimbrial protein;protein_id=WP_001129321.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 174157 174999 . + . ID=gene-CCO53_RS15695;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=CCO53_RS15695;old_locus_tag=CCO53_15665 NZ_NPLZ01000008.1 Protein Homology CDS 174157 174999 . + 0 ID=cds-WP_058331363.1;Parent=gene-CCO53_RS15695;Dbxref=GenBank:WP_058331363.1;Name=WP_058331363.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=CCO53_RS15695;product=fimbrial adhesin StfH;protein_id=WP_058331363.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 175098 176378 . - . ID=gene-CCO53_RS15700;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CCO53_RS15700;old_locus_tag=CCO53_15670 NZ_NPLZ01000008.1 Protein Homology CDS 175098 176378 . - 0 ID=cds-WP_000045249.1;Parent=gene-CCO53_RS15700;Dbxref=GenBank:WP_000045249.1;Name=WP_000045249.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=CCO53_RS15700;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045249.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 176548 177969 . + . ID=gene-CCO53_RS15705;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=CCO53_RS15705;old_locus_tag=CCO53_15675 NZ_NPLZ01000008.1 Protein Homology CDS 176548 177969 . + 0 ID=cds-WP_000845430.1;Parent=gene-CCO53_RS15705;Dbxref=GenBank:WP_000845430.1;Name=WP_000845430.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=CCO53_RS15705;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845430.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 178051 178395 . + . ID=gene-CCO53_RS15710;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=CCO53_RS15710;old_locus_tag=CCO53_15680 NZ_NPLZ01000008.1 Protein Homology CDS 178051 178395 . + 0 ID=cds-WP_001278668.1;Parent=gene-CCO53_RS15710;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=CCO53_RS15710;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 178496 179119 . - . ID=gene-CCO53_RS15715;Name=CCO53_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15715;old_locus_tag=CCO53_15685 NZ_NPLZ01000008.1 Protein Homology CDS 178496 179119 . - 0 ID=cds-WP_000964234.1;Parent=gene-CCO53_RS15715;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=CCO53_RS15715;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 179156 179956 . - . ID=gene-CCO53_RS15720;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=CCO53_RS15720;old_locus_tag=CCO53_15690 NZ_NPLZ01000008.1 Protein Homology CDS 179156 179956 . - 0 ID=cds-WP_001118838.1;Parent=gene-CCO53_RS15720;Dbxref=GenBank:WP_001118838.1;Name=WP_001118838.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=CCO53_RS15720;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118838.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 179949 180647 . - . ID=gene-CCO53_RS15725;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=CCO53_RS15725;old_locus_tag=CCO53_15695 NZ_NPLZ01000008.1 Protein Homology CDS 179949 180647 . - 0 ID=cds-WP_000689822.1;Parent=gene-CCO53_RS15725;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=CCO53_RS15725;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 180732 182249 . + . ID=gene-CCO53_RS15730;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=CCO53_RS15730;old_locus_tag=CCO53_15700 NZ_NPLZ01000008.1 Protein Homology CDS 180732 182249 . + 0 ID=cds-WP_000146450.1;Parent=gene-CCO53_RS15730;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=CCO53_RS15730;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 182379 183806 . + . ID=gene-CCO53_RS15735;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=CCO53_RS15735;old_locus_tag=CCO53_15705 NZ_NPLZ01000008.1 Protein Homology CDS 182379 183806 . + 0 ID=cds-WP_000753958.1;Parent=gene-CCO53_RS15735;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=CCO53_RS15735;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 183959 185116 . + . ID=gene-CCO53_RS15740;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=CCO53_RS15740;old_locus_tag=CCO53_15710 NZ_NPLZ01000008.1 Protein Homology CDS 183959 185116 . + 0 ID=cds-WP_000929420.1;Parent=gene-CCO53_RS15740;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=CCO53_RS15740;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 185238 188207 . - . ID=gene-CCO53_RS15745;Name=CCO53_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15745;old_locus_tag=CCO53_15715 NZ_NPLZ01000008.1 Protein Homology CDS 185238 188207 . - 0 ID=cds-WP_058331362.1;Parent=gene-CCO53_RS15745;Dbxref=GenBank:WP_058331362.1;Name=WP_058331362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527551.1;locus_tag=CCO53_RS15745;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_058331362.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 188392 188778 . - . ID=gene-CCO53_RS15750;Name=CCO53_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15750;old_locus_tag=CCO53_15720 NZ_NPLZ01000008.1 Protein Homology CDS 188392 188778 . - 0 ID=cds-WP_000272193.1;Parent=gene-CCO53_RS15750;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=CCO53_RS15750;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 189025 190326 . + . ID=gene-CCO53_RS15755;Name=CCO53_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15755;old_locus_tag=CCO53_15725 NZ_NPLZ01000008.1 Protein Homology CDS 189025 190326 . + 0 ID=cds-WP_094887747.1;Parent=gene-CCO53_RS15755;Dbxref=GenBank:WP_094887747.1;Name=WP_094887747.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=CCO53_RS15755;product=MFS transporter;protein_id=WP_094887747.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 190362 191186 . - . ID=gene-CCO53_RS15760;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CCO53_RS15760;old_locus_tag=CCO53_15730 NZ_NPLZ01000008.1 Protein Homology CDS 190362 191186 . - 0 ID=cds-WP_001186672.1;Parent=gene-CCO53_RS15760;Dbxref=GenBank:WP_001186672.1;Name=WP_001186672.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=CCO53_RS15760;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186672.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 191216 193888 . - . ID=gene-CCO53_RS15765;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=CCO53_RS15765;old_locus_tag=CCO53_15735 NZ_NPLZ01000008.1 Protein Homology CDS 191216 193888 . - 0 ID=cds-WP_001094519.1;Parent=gene-CCO53_RS15765;Dbxref=GenBank:WP_001094519.1;Name=WP_001094519.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=CCO53_RS15765;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094519.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 194126 194920 . - . ID=gene-CCO53_RS15775;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CCO53_RS15775;old_locus_tag=CCO53_15745 NZ_NPLZ01000008.1 Protein Homology CDS 194126 194920 . - 0 ID=cds-WP_001018214.1;Parent=gene-CCO53_RS15775;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=CCO53_RS15775;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 195371 196096 . + . ID=gene-CCO53_RS15785;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CCO53_RS15785;old_locus_tag=CCO53_15755 NZ_NPLZ01000008.1 Protein Homology CDS 195371 196096 . + 0 ID=cds-WP_000246886.1;Parent=gene-CCO53_RS15785;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=CCO53_RS15785;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 196354 197205 . + . ID=gene-CCO53_RS15795;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CCO53_RS15795;old_locus_tag=CCO53_15765 NZ_NPLZ01000008.1 Protein Homology CDS 196354 197205 . + 0 ID=cds-WP_000808106.1;Parent=gene-CCO53_RS15795;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=CCO53_RS15795;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 197350 198075 . + . ID=gene-CCO53_RS15800;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CCO53_RS15800;old_locus_tag=CCO53_15770 NZ_NPLZ01000008.1 Protein Homology CDS 197350 198075 . + 0 ID=cds-WP_000224567.1;Parent=gene-CCO53_RS15800;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=CCO53_RS15800;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 198222 198779 . + . ID=gene-CCO53_RS15805;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CCO53_RS15805;old_locus_tag=CCO53_15775 NZ_NPLZ01000008.1 Protein Homology CDS 198222 198779 . + 0 ID=cds-WP_000622423.1;Parent=gene-CCO53_RS15805;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=CCO53_RS15805;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 198921 200117 . + . ID=gene-CCO53_RS15810;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=CCO53_RS15810;old_locus_tag=CCO53_15780 NZ_NPLZ01000008.1 Protein Homology CDS 198921 200117 . + 0 ID=cds-WP_000811905.1;Parent=gene-CCO53_RS15810;Dbxref=GenBank:WP_000811905.1;Name=WP_000811905.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=CCO53_RS15810;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811905.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 200430 201188 . + . ID=gene-CCO53_RS15820;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=CCO53_RS15820;old_locus_tag=CCO53_15790 NZ_NPLZ01000008.1 Protein Homology CDS 200430 201188 . + 0 ID=cds-WP_000947413.1;Parent=gene-CCO53_RS15820;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=CCO53_RS15820;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 201201 202058 . + . ID=gene-CCO53_RS15825;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=CCO53_RS15825;old_locus_tag=CCO53_15795 NZ_NPLZ01000008.1 Protein Homology CDS 201201 202058 . + 0 ID=cds-WP_094887748.1;Parent=gene-CCO53_RS15825;Dbxref=GenBank:WP_094887748.1;Name=WP_094887748.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=CCO53_RS15825;product=phosphatidate cytidylyltransferase;protein_id=WP_094887748.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 202070 203422 . + . ID=gene-CCO53_RS15830;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CCO53_RS15830;old_locus_tag=CCO53_15800 NZ_NPLZ01000008.1 Protein Homology CDS 202070 203422 . + 0 ID=cds-WP_000949017.1;Parent=gene-CCO53_RS15830;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=CCO53_RS15830;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 203454 205865 . + . ID=gene-CCO53_RS15835;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=CCO53_RS15835;old_locus_tag=CCO53_15805 NZ_NPLZ01000008.1 Protein Homology CDS 203454 205865 . + 0 ID=cds-WP_001240921.1;Parent=gene-CCO53_RS15835;Dbxref=GenBank:WP_001240921.1;Name=WP_001240921.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=CCO53_RS15835;product=outer membrane protein assembly factor BamA;protein_id=WP_001240921.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 205988 206473 . + . ID=gene-CCO53_RS15840;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=CCO53_RS15840;old_locus_tag=CCO53_15810 NZ_NPLZ01000008.1 Protein Homology CDS 205988 206473 . + 0 ID=cds-WP_000758966.1;Parent=gene-CCO53_RS15840;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=CCO53_RS15840;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 206477 207502 . + . ID=gene-CCO53_RS15845;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CCO53_RS15845;old_locus_tag=CCO53_15815 NZ_NPLZ01000008.1 Protein Homology CDS 206477 207502 . + 0 ID=cds-WP_023202553.1;Parent=gene-CCO53_RS15845;Dbxref=GenBank:WP_023202553.1;Name=WP_023202553.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=CCO53_RS15845;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_023202553.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 207608 208063 . + . ID=gene-CCO53_RS15850;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CCO53_RS15850;old_locus_tag=CCO53_15820 NZ_NPLZ01000008.1 Protein Homology CDS 207608 208063 . + 0 ID=cds-WP_000210741.1;Parent=gene-CCO53_RS15850;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=CCO53_RS15850;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 208067 208855 . + . ID=gene-CCO53_RS15855;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=CCO53_RS15855;old_locus_tag=CCO53_15825 NZ_NPLZ01000008.1 Protein Homology CDS 208067 208855 . + 0 ID=cds-WP_000565950.1;Parent=gene-CCO53_RS15855;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=CCO53_RS15855;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 208855 210003 . + . ID=gene-CCO53_RS15860;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CCO53_RS15860;old_locus_tag=CCO53_15830 NZ_NPLZ01000008.1 Protein Homology CDS 208855 210003 . + 0 ID=cds-WP_000741216.1;Parent=gene-CCO53_RS15860;Dbxref=GenBank:WP_000741216.1;Name=WP_000741216.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=CCO53_RS15860;product=lipid-A-disaccharide synthase;protein_id=WP_000741216.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 210000 210596 . + . ID=gene-CCO53_RS15865;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CCO53_RS15865;old_locus_tag=CCO53_15835 NZ_NPLZ01000008.1 Protein Homology CDS 210000 210596 . + 0 ID=cds-WP_000569411.1;Parent=gene-CCO53_RS15865;Dbxref=GenBank:WP_000569411.1;Name=WP_000569411.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=CCO53_RS15865;product=ribonuclease HII;protein_id=WP_000569411.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 210620 214102 . + . ID=gene-CCO53_RS15870;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=CCO53_RS15870;old_locus_tag=CCO53_15840 NZ_NPLZ01000008.1 Protein Homology CDS 210620 214102 . + 0 ID=cds-WP_001294817.1;Parent=gene-CCO53_RS15870;Dbxref=GenBank:WP_001294817.1;Name=WP_001294817.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=CCO53_RS15870;product=DNA polymerase III subunit alpha;protein_id=WP_001294817.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 214115 215074 . + . ID=gene-CCO53_RS15875;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=CCO53_RS15875;old_locus_tag=CCO53_15845 NZ_NPLZ01000008.1 Protein Homology CDS 214115 215074 . + 0 ID=cds-WP_000055753.1;Parent=gene-CCO53_RS15875;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=CCO53_RS15875;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 215252 217015 . + . ID=gene-CCO53_RS15880;Name=CCO53_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15880;old_locus_tag=CCO53_15850 NZ_NPLZ01000008.1 Protein Homology CDS 215252 217015 . + 0 ID=cds-WP_094887749.1;Parent=gene-CCO53_RS15880;Dbxref=GenBank:WP_094887749.1;Name=WP_094887749.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=CCO53_RS15880;product=chitinase;protein_id=WP_094887749.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 217091 219232 . + . ID=gene-CCO53_RS15885;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=CCO53_RS15885;old_locus_tag=CCO53_15855 NZ_NPLZ01000008.1 Protein Homology CDS 217091 219232 . + 0 ID=cds-WP_001021044.1;Parent=gene-CCO53_RS15885;Dbxref=GenBank:WP_001021044.1;Name=WP_001021044.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=CCO53_RS15885;product=lysine decarboxylase LdcC;protein_id=WP_001021044.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 219288 219677 . + . ID=gene-CCO53_RS15890;Name=CCO53_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15890;old_locus_tag=CCO53_15860 NZ_NPLZ01000008.1 Protein Homology CDS 219288 219677 . + 0 ID=cds-WP_000901086.1;Parent=gene-CCO53_RS15890;Dbxref=GenBank:WP_000901086.1;Name=WP_000901086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=CCO53_RS15890;product=VOC family protein;protein_id=WP_000901086.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 219740 221032 . + . ID=gene-CCO53_RS15895;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CCO53_RS15895;old_locus_tag=CCO53_15865 NZ_NPLZ01000008.1 Protein Homology CDS 219740 221032 . + 0 ID=cds-WP_000210063.1;Parent=gene-CCO53_RS15895;Dbxref=GenBank:WP_000210063.1;Name=WP_000210063.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=CCO53_RS15895;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000210063.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 221116 221376 . - . ID=gene-CCO53_RS15900;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=CCO53_RS15900;old_locus_tag=CCO53_15870 NZ_NPLZ01000008.1 Protein Homology CDS 221116 221376 . - 0 ID=cds-WP_000062330.1;Parent=gene-CCO53_RS15900;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=CCO53_RS15900;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 221363 221563 . - . ID=gene-CCO53_RS15905;Name=CCO53_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15905;old_locus_tag=CCO53_15875 NZ_NPLZ01000008.1 Protein Homology CDS 221363 221563 . - 0 ID=cds-WP_001518678.1;Parent=gene-CCO53_RS15905;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=CCO53_RS15905;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 221761 222306 . + . ID=gene-CCO53_RS15910;Name=CCO53_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15910;old_locus_tag=CCO53_15880 NZ_NPLZ01000008.1 Protein Homology CDS 221761 222306 . + 0 ID=cds-WP_001185319.1;Parent=gene-CCO53_RS15910;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=CCO53_RS15910;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 222303 222725 . + . ID=gene-CCO53_RS15915;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=CCO53_RS15915;old_locus_tag=CCO53_15885 NZ_NPLZ01000008.1 Protein Homology CDS 222303 222725 . + 0 ID=cds-WP_000560528.1;Parent=gene-CCO53_RS15915;Dbxref=GenBank:WP_000560528.1;Name=WP_000560528.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=CCO53_RS15915;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560528.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 222757 223458 . + . ID=gene-CCO53_RS15920;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=CCO53_RS15920;old_locus_tag=CCO53_15890 NZ_NPLZ01000008.1 Protein Homology CDS 222757 223458 . + 0 ID=cds-WP_000252576.1;Parent=gene-CCO53_RS15920;Dbxref=GenBank:WP_000252576.1;Name=WP_000252576.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=CCO53_RS15920;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252576.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 223532 225250 . - . ID=gene-CCO53_RS15925;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=CCO53_RS15925;old_locus_tag=CCO53_15895 NZ_NPLZ01000008.1 Protein Homology CDS 223532 225250 . - 0 ID=cds-WP_001260683.1;Parent=gene-CCO53_RS15925;Dbxref=GenBank:WP_001260683.1;Name=WP_001260683.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=CCO53_RS15925;product=proline--tRNA ligase;protein_id=WP_001260683.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 225361 226068 . - . ID=gene-CCO53_RS15930;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=CCO53_RS15930;old_locus_tag=CCO53_15900 NZ_NPLZ01000008.1 Protein Homology CDS 225361 226068 . - 0 ID=cds-WP_052932259.1;Parent=gene-CCO53_RS15930;Dbxref=GenBank:WP_052932259.1;Name=WP_052932259.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=CCO53_RS15930;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_052932259.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 226065 226469 . - . ID=gene-CCO53_RS15935;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=CCO53_RS15935;old_locus_tag=CCO53_15905 NZ_NPLZ01000008.1 Protein Homology CDS 226065 226469 . - 0 ID=cds-WP_001202315.1;Parent=gene-CCO53_RS15935;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=CCO53_RS15935;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 226588 227403 . - . ID=gene-CCO53_RS15940;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=CCO53_RS15940;old_locus_tag=CCO53_15910 NZ_NPLZ01000008.1 Protein Homology CDS 226588 227403 . - 0 ID=cds-WP_000874215.1;Parent=gene-CCO53_RS15940;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=CCO53_RS15940;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 227442 228095 . - . ID=gene-CCO53_RS15945;Name=CCO53_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15945;old_locus_tag=CCO53_15915 NZ_NPLZ01000008.1 Protein Homology CDS 227442 228095 . - 0 ID=cds-WP_001287486.1;Parent=gene-CCO53_RS15945;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=CCO53_RS15945;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 228088 229119 . - . ID=gene-CCO53_RS15950;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=CCO53_RS15950;old_locus_tag=CCO53_15920 NZ_NPLZ01000008.1 Protein Homology CDS 228088 229119 . - 0 ID=cds-WP_000594021.1;Parent=gene-CCO53_RS15950;Dbxref=GenBank:WP_000594021.1;Name=WP_000594021.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=CCO53_RS15950;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594021.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 229309 229875 . + . ID=gene-CCO53_RS15955;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=CCO53_RS15955;old_locus_tag=CCO53_15925 NZ_NPLZ01000008.1 Protein Homology CDS 229309 229875 . + 0 ID=cds-WP_001140158.1;Parent=gene-CCO53_RS15955;Dbxref=GenBank:WP_001140158.1;Name=WP_001140158.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=CCO53_RS15955;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140158.1;transl_table=11 NZ_NPLZ01000008.1 RefSeq gene 230246 230316 . + . ID=gene-CCO53_RS15960;Name=CCO53_RS15960;end_range=230316,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO53_RS15960;old_locus_tag=CCO53_15930;partial=true NZ_NPLZ01000008.1 cmsearch rRNA 230246 230316 . + . ID=rna-CCO53_RS15960;Parent=gene-CCO53_RS15960;Dbxref=RFAM:RF00177;end_range=230316,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS15960;partial=true;product=16S ribosomal RNA NZ_NPLZ01000008.1 cmsearch exon 230246 230316 . + . ID=exon-CCO53_RS15960-1;Parent=rna-CCO53_RS15960;Dbxref=RFAM:RF00177;end_range=230316,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO53_RS15960;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPLZ01000009.1 1 201676 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024269 NZ_NPLZ01000009.1 RefSeq region 1 201676 . + . ID=NZ_NPLZ01000009.1:1..201676;Dbxref=taxon:2024269;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Ekotedo;strain=CFSAN059890;sub-species=enterica NZ_NPLZ01000009.1 RefSeq gene 140 247 . + . ID=gene-CCO53_RS15965;Name=CCO53_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS15965;old_locus_tag=CCO53_15935 NZ_NPLZ01000009.1 Protein Homology CDS 140 247 . + 0 ID=cds-WP_001537650.1;Parent=gene-CCO53_RS15965;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=CCO53_RS15965;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 329 2008 . - . ID=gene-CCO53_RS15970;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=CCO53_RS15970;old_locus_tag=CCO53_15940 NZ_NPLZ01000009.1 Protein Homology CDS 329 2008 . - 0 ID=cds-WP_058331597.1;Parent=gene-CCO53_RS15970;Dbxref=GenBank:WP_058331597.1;Name=WP_058331597.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=CCO53_RS15970;product=cellulose biosynthesis protein BcsG;protein_id=WP_058331597.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 2005 2196 . - . ID=gene-CCO53_RS15975;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=CCO53_RS15975;old_locus_tag=CCO53_15945 NZ_NPLZ01000009.1 Protein Homology CDS 2005 2196 . - 0 ID=cds-WP_000988321.1;Parent=gene-CCO53_RS15975;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=CCO53_RS15975;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 2193 3764 . - . ID=gene-CCO53_RS15980;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=CCO53_RS15980;old_locus_tag=CCO53_15950 NZ_NPLZ01000009.1 Protein Homology CDS 2193 3764 . - 0 ID=cds-WP_080160598.1;Parent=gene-CCO53_RS15980;Dbxref=GenBank:WP_080160598.1;Name=WP_080160598.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=CCO53_RS15980;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_080160598.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 4009 4212 . + . ID=gene-CCO53_RS15985;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=CCO53_RS15985;old_locus_tag=CCO53_15955 NZ_NPLZ01000009.1 Protein Homology CDS 4009 4212 . + 0 ID=cds-WP_000282616.1;Parent=gene-CCO53_RS15985;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=CCO53_RS15985;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 4213 4965 . + . ID=gene-CCO53_RS15990;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=CCO53_RS15990;old_locus_tag=CCO53_15960 NZ_NPLZ01000009.1 Protein Homology CDS 4213 4965 . + 0 ID=cds-WP_080160599.1;Parent=gene-CCO53_RS15990;Dbxref=GenBank:WP_080160599.1;Name=WP_080160599.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=CCO53_RS15990;product=cellulose biosynthesis protein BcsQ;protein_id=WP_080160599.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 4962 7586 . + . ID=gene-CCO53_RS15995;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=CCO53_RS15995;old_locus_tag=CCO53_15965 NZ_NPLZ01000009.1 Protein Homology CDS 4962 7586 . + 0 ID=cds-WP_094887750.1;Parent=gene-CCO53_RS15995;Dbxref=GenBank:WP_094887750.1;Name=WP_094887750.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=CCO53_RS15995;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_094887750.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 7597 9897 . + . ID=gene-CCO53_RS16000;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=CCO53_RS16000;old_locus_tag=CCO53_15970 NZ_NPLZ01000009.1 Protein Homology CDS 7597 9897 . + 0 ID=cds-WP_000823796.1;Parent=gene-CCO53_RS16000;Dbxref=GenBank:WP_000823796.1;Name=WP_000823796.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=CCO53_RS16000;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823796.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 9901 11010 . + . ID=gene-CCO53_RS16005;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=CCO53_RS16005;old_locus_tag=CCO53_15975 NZ_NPLZ01000009.1 Protein Homology CDS 9901 11010 . + 0 ID=cds-WP_000988802.1;Parent=gene-CCO53_RS16005;Dbxref=GenBank:WP_000988802.1;Name=WP_000988802.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=CCO53_RS16005;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_000988802.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 10992 14534 . + . ID=gene-CCO53_RS16010;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=CCO53_RS16010;old_locus_tag=CCO53_15980 NZ_NPLZ01000009.1 Protein Homology CDS 10992 14534 . + 0 ID=cds-WP_094887751.1;Parent=gene-CCO53_RS16010;Dbxref=GenBank:WP_094887751.1;Name=WP_094887751.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=CCO53_RS16010;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_094887751.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 14708 16714 . + . ID=gene-CCO53_RS16020;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=CCO53_RS16020;old_locus_tag=CCO53_15990 NZ_NPLZ01000009.1 Protein Homology CDS 14708 16714 . + 0 ID=cds-WP_001266348.1;Parent=gene-CCO53_RS16020;Dbxref=GenBank:WP_001266348.1;Name=WP_001266348.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=CCO53_RS16020;product=biofilm formation regulator HmsP;protein_id=WP_001266348.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 16872 18158 . + . ID=gene-CCO53_RS16025;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=CCO53_RS16025;old_locus_tag=CCO53_15995 NZ_NPLZ01000009.1 Protein Homology CDS 16872 18158 . + 0 ID=cds-WP_000858228.1;Parent=gene-CCO53_RS16025;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=CCO53_RS16025;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 18378 19865 . + . ID=gene-CCO53_RS16030;Name=CCO53_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16030;old_locus_tag=CCO53_16000 NZ_NPLZ01000009.1 Protein Homology CDS 18378 19865 . + 0 ID=cds-WP_001728755.1;Parent=gene-CCO53_RS16030;Dbxref=GenBank:WP_001728755.1;Name=WP_001728755.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=CCO53_RS16030;product=M16 family metallopeptidase;protein_id=WP_001728755.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 19919 20848 . - . ID=gene-CCO53_RS16035;Name=CCO53_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16035;old_locus_tag=CCO53_16005 NZ_NPLZ01000009.1 Protein Homology CDS 19919 20848 . - 0 ID=cds-WP_000037575.1;Parent=gene-CCO53_RS16035;Dbxref=GenBank:WP_000037575.1;Name=WP_000037575.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=CCO53_RS16035;product=sugar kinase;protein_id=WP_000037575.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 21077 21844 . + . ID=gene-CCO53_RS16040;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=CCO53_RS16040;old_locus_tag=CCO53_16010 NZ_NPLZ01000009.1 Protein Homology CDS 21077 21844 . + 0 ID=cds-WP_000595623.1;Parent=gene-CCO53_RS16040;Dbxref=GenBank:WP_000595623.1;Name=WP_000595623.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=CCO53_RS16040;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595623.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 21954 24014 . + . ID=gene-CCO53_RS16045;Name=CCO53_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16045;old_locus_tag=CCO53_16015 NZ_NPLZ01000009.1 Protein Homology CDS 21954 24014 . + 0 ID=cds-WP_094887752.1;Parent=gene-CCO53_RS16045;Dbxref=GenBank:WP_094887752.1;Name=WP_094887752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=CCO53_RS16045;product=AsmA family protein;protein_id=WP_094887752.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 24054 25376 . - . ID=gene-CCO53_RS16050;Name=CCO53_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16050;old_locus_tag=CCO53_16020 NZ_NPLZ01000009.1 Protein Homology CDS 24054 25376 . - 0 ID=cds-WP_001148983.1;Parent=gene-CCO53_RS16050;Dbxref=GenBank:WP_001148983.1;Name=WP_001148983.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=CCO53_RS16050;product=MFS transporter;protein_id=WP_001148983.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 25727 26755 . - . ID=gene-CCO53_RS16055;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=CCO53_RS16055;old_locus_tag=CCO53_16025 NZ_NPLZ01000009.1 Protein Homology CDS 25727 26755 . - 0 ID=cds-WP_000191231.1;Parent=gene-CCO53_RS16055;Dbxref=GenBank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=CCO53_RS16055;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 26828 27727 . - . ID=gene-CCO53_RS16060;Name=CCO53_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16060;old_locus_tag=CCO53_16030 NZ_NPLZ01000009.1 Protein Homology CDS 26828 27727 . - 0 ID=cds-WP_000358046.1;Parent=gene-CCO53_RS16060;Dbxref=GenBank:WP_000358046.1;Name=WP_000358046.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=CCO53_RS16060;product=LysR family transcriptional regulator;protein_id=WP_000358046.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 28358 28960 . + . ID=gene-CCO53_RS16065;Name=CCO53_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16065;old_locus_tag=CCO53_16035 NZ_NPLZ01000009.1 Protein Homology CDS 28358 28960 . + 0 ID=cds-WP_001196081.1;Parent=gene-CCO53_RS16065;Dbxref=GenBank:WP_001196081.1;Name=WP_001196081.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=CCO53_RS16065;product=response regulator transcription factor;protein_id=WP_001196081.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 28966 29322 . - . ID=gene-CCO53_RS16070;Name=CCO53_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16070;old_locus_tag=CCO53_16040 NZ_NPLZ01000009.1 Protein Homology CDS 28966 29322 . - 0 ID=cds-WP_001120251.1;Parent=gene-CCO53_RS16070;Dbxref=GenBank:WP_001120251.1;Name=WP_001120251.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=CCO53_RS16070;product=glycoside hydrolase family protein;protein_id=WP_001120251.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 29603 31192 . + . ID=gene-CCO53_RS16075;Name=CCO53_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16075;old_locus_tag=CCO53_16045 NZ_NPLZ01000009.1 Protein Homology CDS 29603 31192 . + 0 ID=cds-WP_000185008.1;Parent=gene-CCO53_RS16075;Dbxref=GenBank:WP_000185008.1;Name=WP_000185008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=CCO53_RS16075;product=STY4199 family HEPN domain-containing protein;protein_id=WP_000185008.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 31205 32854 . - . ID=gene-CCO53_RS16080;Name=CCO53_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16080;old_locus_tag=CCO53_16050 NZ_NPLZ01000009.1 Protein Homology CDS 31205 32854 . - 0 ID=cds-WP_000934257.1;Parent=gene-CCO53_RS16080;Dbxref=GenBank:WP_000934257.1;Name=WP_000934257.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=CCO53_RS16080;product=alpha%2Calpha-trehalase;protein_id=WP_000934257.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 33179 33898 . + . ID=gene-CCO53_RS16085;Name=CCO53_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16085;old_locus_tag=CCO53_16055 NZ_NPLZ01000009.1 Protein Homology CDS 33179 33898 . + 0 ID=cds-WP_000572565.1;Parent=gene-CCO53_RS16085;Dbxref=GenBank:WP_000572565.1;Name=WP_000572565.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=CCO53_RS16085;product=GntR family transcriptional regulator;protein_id=WP_000572565.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 34074 35051 . + . ID=gene-CCO53_RS16090;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=CCO53_RS16090;old_locus_tag=CCO53_16060 NZ_NPLZ01000009.1 Protein Homology CDS 34074 35051 . + 0 ID=cds-WP_078054872.1;Parent=gene-CCO53_RS16090;Dbxref=GenBank:WP_078054872.1;Name=WP_078054872.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=CCO53_RS16090;product=6-phosphofructose-aspartate deglycase;protein_id=WP_078054872.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 35115 35960 . + . ID=gene-CCO53_RS16095;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=CCO53_RS16095;old_locus_tag=CCO53_16065 NZ_NPLZ01000009.1 Protein Homology CDS 35115 35960 . + 0 ID=cds-WP_023218890.1;Parent=gene-CCO53_RS16095;Dbxref=GenBank:WP_023218890.1;Name=WP_023218890.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=CCO53_RS16095;product=fructose-aspartate kinase;protein_id=WP_023218890.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 36014 37333 . + . ID=gene-CCO53_RS16100;Name=CCO53_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16100;old_locus_tag=CCO53_16070 NZ_NPLZ01000009.1 Protein Homology CDS 36014 37333 . + 0 ID=cds-WP_000498935.1;Parent=gene-CCO53_RS16100;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=CCO53_RS16100;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 37392 38435 . + . ID=gene-CCO53_RS16105;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=CCO53_RS16105;old_locus_tag=CCO53_16075 NZ_NPLZ01000009.1 Protein Homology CDS 37392 38435 . + 0 ID=cds-WP_000702755.1;Parent=gene-CCO53_RS16105;Dbxref=GenBank:WP_000702755.1;Name=WP_000702755.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=CCO53_RS16105;product=fructose-asparagine asparaginase;protein_id=WP_000702755.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 38482 39834 . - . ID=gene-CCO53_RS16110;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=CCO53_RS16110;old_locus_tag=CCO53_16080 NZ_NPLZ01000009.1 Protein Homology CDS 38482 39834 . - 0 ID=cds-WP_058331601.1;Parent=gene-CCO53_RS16110;Dbxref=GenBank:WP_058331601.1;Name=WP_058331601.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=CCO53_RS16110;product=glutathione-disulfide reductase;protein_id=WP_058331601.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 39939 40781 . - . ID=gene-CCO53_RS16115;Name=CCO53_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16115;old_locus_tag=CCO53_16085 NZ_NPLZ01000009.1 Protein Homology CDS 39939 40781 . - 0 ID=cds-WP_000954233.1;Parent=gene-CCO53_RS16115;Dbxref=GenBank:WP_000954233.1;Name=WP_000954233.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=CCO53_RS16115;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954233.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 41405 42058 . + . ID=gene-CCO53_RS16125;Name=CCO53_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16125;old_locus_tag=CCO53_16095 NZ_NPLZ01000009.1 Protein Homology CDS 41405 42058 . + 0 ID=cds-WP_000469190.1;Parent=gene-CCO53_RS16125;Dbxref=GenBank:WP_000469190.1;Name=WP_000469190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469196.1;locus_tag=CCO53_RS16125;product=hypothetical protein;protein_id=WP_000469190.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 42221 44263 . + . ID=gene-CCO53_RS16130;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=CCO53_RS16130;old_locus_tag=CCO53_16100 NZ_NPLZ01000009.1 Protein Homology CDS 42221 44263 . + 0 ID=cds-WP_000184178.1;Parent=gene-CCO53_RS16130;Dbxref=GenBank:WP_000184178.1;Name=WP_000184178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=CCO53_RS16130;product=oligopeptidase A;protein_id=WP_000184178.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 44270 45028 . + . ID=gene-CCO53_RS16135;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=CCO53_RS16135;old_locus_tag=CCO53_16105 NZ_NPLZ01000009.1 Protein Homology CDS 44270 45028 . + 0 ID=cds-WP_058331602.1;Parent=gene-CCO53_RS16135;Dbxref=GenBank:WP_058331602.1;Name=WP_058331602.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=CCO53_RS16135;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_058331602.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 45120 46592 . - . ID=gene-CCO53_RS16140;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=CCO53_RS16140;old_locus_tag=CCO53_16110 NZ_NPLZ01000009.1 Protein Homology CDS 45120 46592 . - 0 ID=cds-WP_058331603.1;Parent=gene-CCO53_RS16140;Dbxref=GenBank:WP_058331603.1;Name=WP_058331603.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=CCO53_RS16140;product=dipeptide/tripeptide permease DtpB;protein_id=WP_058331603.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 46916 47350 . - . ID=gene-CCO53_RS16145;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=CCO53_RS16145;old_locus_tag=CCO53_16115 NZ_NPLZ01000009.1 Protein Homology CDS 46916 47350 . - 0 ID=cds-WP_000323565.1;Parent=gene-CCO53_RS16145;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=CCO53_RS16145;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 47738 48073 . + . ID=gene-CCO53_RS16150;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=CCO53_RS16150;old_locus_tag=CCO53_16120 NZ_NPLZ01000009.1 Protein Homology CDS 47738 48073 . + 0 ID=cds-WP_000626193.1;Parent=gene-CCO53_RS16150;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=CCO53_RS16150;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 48214 49710 . - . ID=gene-CCO53_RS16155;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=CCO53_RS16155;old_locus_tag=CCO53_16125 NZ_NPLZ01000009.1 Protein Homology CDS 48214 49710 . - 0 ID=cds-WP_000902764.1;Parent=gene-CCO53_RS16155;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=CCO53_RS16155;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 49941 51137 . + . ID=gene-CCO53_RS16160;Name=CCO53_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16160;old_locus_tag=CCO53_16130 NZ_NPLZ01000009.1 Protein Homology CDS 49941 51137 . + 0 ID=cds-WP_000439230.1;Parent=gene-CCO53_RS16160;Dbxref=GenBank:WP_000439230.1;Name=WP_000439230.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=CCO53_RS16160;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439230.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 51443 52510 . + . ID=gene-CCO53_RS16165;Name=CCO53_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16165;old_locus_tag=CCO53_16135 NZ_NPLZ01000009.1 Protein Homology CDS 51443 52510 . + 0 ID=cds-WP_000359828.1;Parent=gene-CCO53_RS16165;Dbxref=GenBank:WP_000359828.1;Name=WP_000359828.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=CCO53_RS16165;product=HlyD family secretion protein;protein_id=WP_000359828.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 52507 55248 . + . ID=gene-CCO53_RS16170;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=CCO53_RS16170;old_locus_tag=CCO53_16140 NZ_NPLZ01000009.1 Protein Homology CDS 52507 55248 . + 0 ID=cds-WP_079972992.1;Parent=gene-CCO53_RS16170;Dbxref=GenBank:WP_079972992.1;Name=WP_079972992.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=CCO53_RS16170;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_079972992.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 55248 56372 . + . ID=gene-CCO53_RS16175;Name=CCO53_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16175;old_locus_tag=CCO53_16145 NZ_NPLZ01000009.1 Protein Homology CDS 55248 56372 . + 0 ID=cds-WP_001214764.1;Parent=gene-CCO53_RS16175;Dbxref=GenBank:WP_001214764.1;Name=WP_001214764.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=CCO53_RS16175;product=ABC transporter permease;protein_id=WP_001214764.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 56462 56863 . - . ID=gene-CCO53_RS16180;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=CCO53_RS16180;old_locus_tag=CCO53_16150 NZ_NPLZ01000009.1 Protein Homology CDS 56462 56863 . - 0 ID=cds-WP_001190057.1;Parent=gene-CCO53_RS16180;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=CCO53_RS16180;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 56955 57533 . - . ID=gene-CCO53_RS16185;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=CCO53_RS16185;old_locus_tag=CCO53_16155 NZ_NPLZ01000009.1 Protein Homology CDS 56955 57533 . - 0 ID=cds-WP_000285380.1;Parent=gene-CCO53_RS16185;Dbxref=GenBank:WP_000285380.1;Name=WP_000285380.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=CCO53_RS16185;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285380.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 57585 58634 . - . ID=gene-CCO53_RS16190;Name=CCO53_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16190;old_locus_tag=CCO53_16160 NZ_NPLZ01000009.1 Protein Homology CDS 57585 58634 . - 0 ID=cds-WP_000179594.1;Parent=gene-CCO53_RS16190;Dbxref=GenBank:WP_000179594.1;Name=WP_000179594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=CCO53_RS16190;product=AI-2E family transporter;protein_id=WP_000179594.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 58724 59983 . + . ID=gene-CCO53_RS16195;Name=CCO53_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16195;old_locus_tag=CCO53_16165 NZ_NPLZ01000009.1 Protein Homology CDS 58724 59983 . + 0 ID=cds-WP_094887753.1;Parent=gene-CCO53_RS16195;Dbxref=GenBank:WP_094887753.1;Name=WP_094887753.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=CCO53_RS16195;product=MFS transporter;protein_id=WP_094887753.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 59987 60544 . - . ID=gene-CCO53_RS16200;Name=CCO53_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16200;old_locus_tag=CCO53_16170 NZ_NPLZ01000009.1 Protein Homology CDS 59987 60544 . - 0 ID=cds-WP_001245277.1;Parent=gene-CCO53_RS16200;Dbxref=GenBank:WP_001245277.1;Name=WP_001245277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=CCO53_RS16200;product=DcrB family lipoprotein;protein_id=WP_001245277.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 60617 61282 . - . ID=gene-CCO53_RS16205;Name=CCO53_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16205;old_locus_tag=CCO53_16175 NZ_NPLZ01000009.1 Protein Homology CDS 60617 61282 . - 0 ID=cds-WP_001531644.1;Parent=gene-CCO53_RS16205;Dbxref=GenBank:WP_001531644.1;Name=WP_001531644.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=CCO53_RS16205;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001531644.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 61452 61697 . + . ID=gene-CCO53_RS16210;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=CCO53_RS16210;old_locus_tag=CCO53_16180 NZ_NPLZ01000009.1 Protein Homology CDS 61452 61697 . + 0 ID=cds-WP_001541054.1;Parent=gene-CCO53_RS16210;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=CCO53_RS16210;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 61721 63364 . - . ID=gene-CCO53_RS16215;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=CCO53_RS16215;old_locus_tag=CCO53_16185 NZ_NPLZ01000009.1 Protein Homology CDS 61721 63364 . - 0 ID=cds-WP_000789682.1;Parent=gene-CCO53_RS16215;Dbxref=GenBank:WP_000789682.1;Name=WP_000789682.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=CCO53_RS16215;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789682.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 63564 65762 . - . ID=gene-CCO53_RS16220;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=CCO53_RS16220;old_locus_tag=CCO53_16190 NZ_NPLZ01000009.1 Protein Homology CDS 63564 65762 . - 0 ID=cds-WP_000106648.1;Parent=gene-CCO53_RS16220;Dbxref=GenBank:WP_000106648.1;Name=WP_000106648.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=CCO53_RS16220;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106648.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 65843 66469 . - . ID=gene-CCO53_RS16225;Name=CCO53_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16225;old_locus_tag=CCO53_16195 NZ_NPLZ01000009.1 Protein Homology CDS 65843 66469 . - 0 ID=cds-WP_000964735.1;Parent=gene-CCO53_RS16225;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=CCO53_RS16225;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 66611 66982 . + . ID=gene-CCO53_RS16230;Name=CCO53_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16230;old_locus_tag=CCO53_16200 NZ_NPLZ01000009.1 Protein Homology CDS 66611 66982 . + 0 ID=cds-WP_000042851.1;Parent=gene-CCO53_RS16230;Dbxref=GenBank:WP_000042851.1;Name=WP_000042851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=CCO53_RS16230;product=DUF2500 domain-containing protein;protein_id=WP_000042851.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 67004 67273 . - . ID=gene-CCO53_RS16235;Name=CCO53_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16235;old_locus_tag=CCO53_16205 NZ_NPLZ01000009.1 Protein Homology CDS 67004 67273 . - 0 ID=cds-WP_000906757.1;Parent=gene-CCO53_RS16235;Dbxref=GenBank:WP_000906757.1;Name=WP_000906757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=CCO53_RS16235;product=DUF1145 family protein;protein_id=WP_000906757.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 67263 67859 . - . ID=gene-CCO53_RS16240;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CCO53_RS16240;old_locus_tag=CCO53_16210 NZ_NPLZ01000009.1 Protein Homology CDS 67263 67859 . - 0 ID=cds-WP_000743276.1;Parent=gene-CCO53_RS16240;Dbxref=GenBank:WP_000743276.1;Name=WP_000743276.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=CCO53_RS16240;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743276.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 67985 69460 . + . ID=gene-CCO53_RS16245;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CCO53_RS16245;old_locus_tag=CCO53_16215 NZ_NPLZ01000009.1 Protein Homology CDS 67985 69460 . + 0 ID=cds-WP_001533896.1;Parent=gene-CCO53_RS16245;Dbxref=GenBank:WP_001533896.1;Name=WP_001533896.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=CCO53_RS16245;product=signal recognition particle-docking protein FtsY;protein_id=WP_001533896.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 69463 70131 . + . ID=gene-CCO53_RS16250;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=CCO53_RS16250;old_locus_tag=CCO53_16220 NZ_NPLZ01000009.1 Protein Homology CDS 69463 70131 . + 0 ID=cds-WP_000617729.1;Parent=gene-CCO53_RS16250;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=CCO53_RS16250;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 70124 71179 . + . ID=gene-CCO53_RS16255;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=CCO53_RS16255;old_locus_tag=CCO53_16225 NZ_NPLZ01000009.1 Protein Homology CDS 70124 71179 . + 0 ID=cds-WP_001081707.1;Parent=gene-CCO53_RS16255;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=CCO53_RS16255;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 71425 72279 . + . ID=gene-CCO53_RS16260;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=CCO53_RS16260;old_locus_tag=CCO53_16230 NZ_NPLZ01000009.1 Protein Homology CDS 71425 72279 . + 0 ID=cds-WP_000159621.1;Parent=gene-CCO53_RS16260;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=CCO53_RS16260;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 72601 73704 . + . ID=gene-CCO53_RS16265;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=CCO53_RS16265;old_locus_tag=CCO53_16235 NZ_NPLZ01000009.1 Protein Homology CDS 72601 73704 . + 0 ID=cds-WP_001747710.1;Parent=gene-CCO53_RS16265;Dbxref=GenBank:WP_001747710.1;Name=WP_001747710.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=CCO53_RS16265;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001747710.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 73788 73913 . - . ID=gene-CCO53_RS23705;Name=CCO53_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS23705 NZ_NPLZ01000009.1 Protein Homology CDS 73788 73913 . - 0 ID=cds-WP_011233195.1;Parent=gene-CCO53_RS23705;Dbxref=GenBank:WP_011233195.1;Name=WP_011233195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233195.1;locus_tag=CCO53_RS23705;product=hypothetical protein;protein_id=WP_011233195.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 73898 74281 . - . ID=gene-CCO53_RS16270;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=CCO53_RS16270;old_locus_tag=CCO53_16240 NZ_NPLZ01000009.1 Protein Homology CDS 73898 74281 . - 0 ID=cds-WP_058331604.1;Parent=gene-CCO53_RS16270;Dbxref=GenBank:WP_058331604.1;Name=WP_058331604.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=CCO53_RS16270;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_058331604.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 74703 75812 . + . ID=gene-CCO53_RS16275;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=CCO53_RS16275;old_locus_tag=CCO53_16245 NZ_NPLZ01000009.1 Protein Homology CDS 74703 75812 . + 0 ID=cds-WP_000822976.1;Parent=gene-CCO53_RS16275;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=CCO53_RS16275;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 75872 76798 . + . ID=gene-CCO53_RS16280;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=CCO53_RS16280;old_locus_tag=CCO53_16250 NZ_NPLZ01000009.1 Protein Homology CDS 75872 76798 . + 0 ID=cds-WP_000003007.1;Parent=gene-CCO53_RS16280;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=CCO53_RS16280;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 76795 78072 . + . ID=gene-CCO53_RS16285;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=CCO53_RS16285;old_locus_tag=CCO53_16255 NZ_NPLZ01000009.1 Protein Homology CDS 76795 78072 . + 0 ID=cds-WP_000803764.1;Parent=gene-CCO53_RS16285;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=CCO53_RS16285;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 78069 78836 . + . ID=gene-CCO53_RS16290;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=CCO53_RS16290;old_locus_tag=CCO53_16260 NZ_NPLZ01000009.1 Protein Homology CDS 78069 78836 . + 0 ID=cds-WP_058331605.1;Parent=gene-CCO53_RS16290;Dbxref=GenBank:WP_058331605.1;Name=WP_058331605.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=CCO53_RS16290;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_058331605.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 78838 79551 . + . ID=gene-CCO53_RS16295;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=CCO53_RS16295;old_locus_tag=CCO53_16265 NZ_NPLZ01000009.1 Protein Homology CDS 78838 79551 . + 0 ID=cds-WP_000416114.1;Parent=gene-CCO53_RS16295;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=CCO53_RS16295;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 79682 79903 . + . ID=gene-CCO53_RS16300;Name=CCO53_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16300;old_locus_tag=CCO53_16270 NZ_NPLZ01000009.1 Protein Homology CDS 79682 79903 . + 0 ID=cds-WP_001520924.1;Parent=gene-CCO53_RS16300;Dbxref=GenBank:WP_001520924.1;Name=WP_001520924.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=CCO53_RS16300;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001520924.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 79900 80268 . + . ID=gene-CCO53_RS16305;Name=CCO53_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16305;old_locus_tag=CCO53_16275 NZ_NPLZ01000009.1 Protein Homology CDS 79900 80268 . + 0 ID=cds-WP_000174964.1;Parent=gene-CCO53_RS16305;Dbxref=GenBank:WP_000174964.1;Name=WP_000174964.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=CCO53_RS16305;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_000174964.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 80527 81843 . + . ID=gene-CCO53_RS16310;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=CCO53_RS16310;old_locus_tag=CCO53_16280 NZ_NPLZ01000009.1 Protein Homology CDS 80527 81843 . + 0 ID=cds-WP_000624747.1;Parent=gene-CCO53_RS16310;Dbxref=GenBank:WP_000624747.1;Name=WP_000624747.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=CCO53_RS16310;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624747.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 81948 82835 . + . ID=gene-CCO53_RS16315;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=CCO53_RS16315;old_locus_tag=CCO53_16285 NZ_NPLZ01000009.1 Protein Homology CDS 81948 82835 . + 0 ID=cds-WP_000099303.1;Parent=gene-CCO53_RS16315;Dbxref=GenBank:WP_000099303.1;Name=WP_000099303.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=CCO53_RS16315;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099303.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 82832 83677 . + . ID=gene-CCO53_RS16320;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=CCO53_RS16320;old_locus_tag=CCO53_16290 NZ_NPLZ01000009.1 Protein Homology CDS 82832 83677 . + 0 ID=cds-WP_000572196.1;Parent=gene-CCO53_RS16320;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=CCO53_RS16320;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 83679 84749 . + . ID=gene-CCO53_RS16325;Name=CCO53_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16325;old_locus_tag=CCO53_16295 NZ_NPLZ01000009.1 Protein Homology CDS 83679 84749 . + 0 ID=cds-WP_000907842.1;Parent=gene-CCO53_RS16325;Dbxref=GenBank:WP_000907842.1;Name=WP_000907842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=CCO53_RS16325;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907842.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 84746 85486 . + . ID=gene-CCO53_RS16330;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=CCO53_RS16330;old_locus_tag=CCO53_16300 NZ_NPLZ01000009.1 Protein Homology CDS 84746 85486 . + 0 ID=cds-WP_000073554.1;Parent=gene-CCO53_RS16330;Dbxref=GenBank:WP_000073554.1;Name=WP_000073554.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=CCO53_RS16330;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073554.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 85499 85915 . - . ID=gene-CCO53_RS16335;Name=CCO53_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16335;old_locus_tag=CCO53_16305 NZ_NPLZ01000009.1 Protein Homology CDS 85499 85915 . - 0 ID=cds-WP_000826040.1;Parent=gene-CCO53_RS16335;Dbxref=GenBank:WP_000826040.1;Name=WP_000826040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=CCO53_RS16335;product=DUF2756 family protein;protein_id=WP_000826040.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 86041 87783 . + . ID=gene-CCO53_RS16340;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=CCO53_RS16340;old_locus_tag=CCO53_16310 NZ_NPLZ01000009.1 Protein Homology CDS 86041 87783 . + 0 ID=cds-WP_024156895.1;Parent=gene-CCO53_RS16340;Dbxref=GenBank:WP_024156895.1;Name=WP_024156895.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=CCO53_RS16340;product=gamma-glutamyltransferase;protein_id=WP_024156895.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 87828 88862 . - . ID=gene-CCO53_RS16345;Name=CCO53_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16345;old_locus_tag=CCO53_16315 NZ_NPLZ01000009.1 Protein Homology CDS 87828 88862 . - 0 ID=cds-WP_000675705.1;Parent=gene-CCO53_RS16345;Dbxref=GenBank:WP_000675705.1;Name=WP_000675705.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=CCO53_RS16345;product=phosphotriesterase family protein;protein_id=WP_000675705.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 88859 89830 . - . ID=gene-CCO53_RS16350;Name=CCO53_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16350;old_locus_tag=CCO53_16320 NZ_NPLZ01000009.1 Protein Homology CDS 88859 89830 . - 0 ID=cds-WP_080160089.1;Parent=gene-CCO53_RS16350;Dbxref=GenBank:WP_080160089.1;Name=WP_080160089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=CCO53_RS16350;product=DMT family transporter;protein_id=WP_080160089.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 89884 90645 . - . ID=gene-CCO53_RS16355;Name=CCO53_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16355;old_locus_tag=CCO53_16325 NZ_NPLZ01000009.1 Protein Homology CDS 89884 90645 . - 0 ID=cds-WP_023219537.1;Parent=gene-CCO53_RS16355;Dbxref=GenBank:WP_023219537.1;Name=WP_023219537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=CCO53_RS16355;product=glutamine amidotransferase;protein_id=WP_023219537.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 90661 91875 . - . ID=gene-CCO53_RS16360;Name=CCO53_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16360;old_locus_tag=CCO53_16330 NZ_NPLZ01000009.1 Protein Homology CDS 90661 91875 . - 0 ID=cds-WP_080160088.1;Parent=gene-CCO53_RS16360;Dbxref=GenBank:WP_080160088.1;Name=WP_080160088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=CCO53_RS16360;product=PfkB family carbohydrate kinase;protein_id=WP_080160088.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 92140 92628 . - . ID=gene-CCO53_RS16365;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=CCO53_RS16365;old_locus_tag=CCO53_16335 NZ_NPLZ01000009.1 Protein Homology CDS 92140 92628 . - 0 ID=cds-WP_001290286.1;Parent=gene-CCO53_RS16365;Dbxref=GenBank:WP_001290286.1;Name=WP_001290286.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=CCO53_RS16365;product=N-acetyltransferase;protein_id=WP_001290286.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 93096 94133 . + . ID=gene-CCO53_RS16370;Name=CCO53_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16370;old_locus_tag=CCO53_16340 NZ_NPLZ01000009.1 Protein Homology CDS 93096 94133 . + 0 ID=cds-WP_094887754.1;Parent=gene-CCO53_RS16370;Dbxref=GenBank:WP_094887754.1;Name=WP_094887754.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=CCO53_RS16370;product=oxidoreductase;protein_id=WP_094887754.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 94257 94952 . + . ID=gene-CCO53_RS16375;Name=CCO53_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16375;old_locus_tag=CCO53_16345 NZ_NPLZ01000009.1 Protein Homology CDS 94257 94952 . + 0 ID=cds-WP_000639789.1;Parent=gene-CCO53_RS16375;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=CCO53_RS16375;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 95082 96077 . + . ID=gene-CCO53_RS16380;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=CCO53_RS16380;old_locus_tag=CCO53_16350 NZ_NPLZ01000009.1 Protein Homology CDS 95082 96077 . + 0 ID=cds-WP_000730239.1;Parent=gene-CCO53_RS16380;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=CCO53_RS16380;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 96216 96749 . + . ID=gene-CCO53_RS16385;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CCO53_RS16385;old_locus_tag=CCO53_16355 NZ_NPLZ01000009.1 Protein Homology CDS 96216 96749 . + 0 ID=cds-WP_000108342.1;Parent=gene-CCO53_RS16385;Dbxref=GenBank:WP_000108342.1;Name=WP_000108342.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=CCO53_RS16385;product=gluconokinase;protein_id=WP_000108342.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 96746 98086 . + . ID=gene-CCO53_RS16390;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=CCO53_RS16390;old_locus_tag=CCO53_16360 NZ_NPLZ01000009.1 Protein Homology CDS 96746 98086 . + 0 ID=cds-WP_000105950.1;Parent=gene-CCO53_RS16390;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=CCO53_RS16390;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq pseudogene 98201 98275 . - . ID=gene-CCO53_RS24415;Name=CCO53_RS24415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO53_RS24415;partial=true;pseudo=true;start_range=.,98201 NZ_NPLZ01000009.1 Protein Homology CDS 98201 98275 . - 0 ID=cds-CCO53_RS24415;Parent=gene-CCO53_RS24415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=CCO53_RS24415;partial=true;product=MarC family protein;pseudo=true;start_range=.,98201;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 98510 99616 . + . ID=gene-CCO53_RS16400;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO53_RS16400;old_locus_tag=CCO53_16370 NZ_NPLZ01000009.1 Protein Homology CDS 98510 99616 . + 0 ID=cds-WP_000799937.1;Parent=gene-CCO53_RS16400;Dbxref=GenBank:WP_000799937.1;Name=WP_000799937.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=CCO53_RS16400;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799937.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 99963 102149 . + . ID=gene-CCO53_RS16405;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=CCO53_RS16405;old_locus_tag=CCO53_16375 NZ_NPLZ01000009.1 Protein Homology CDS 99963 102149 . + 0 ID=cds-WP_000098553.1;Parent=gene-CCO53_RS16405;Dbxref=GenBank:WP_000098553.1;Name=WP_000098553.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=CCO53_RS16405;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098553.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 102146 104122 . + . ID=gene-CCO53_RS16410;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO53_RS16410;old_locus_tag=CCO53_16380 NZ_NPLZ01000009.1 Protein Homology CDS 102146 104122 . + 0 ID=cds-WP_000192489.1;Parent=gene-CCO53_RS16410;Dbxref=GenBank:WP_000192489.1;Name=WP_000192489.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=CCO53_RS16410;product=glycogen debranching protein GlgX;protein_id=WP_000192489.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 104137 105432 . + . ID=gene-CCO53_RS16415;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=CCO53_RS16415;old_locus_tag=CCO53_16385 NZ_NPLZ01000009.1 Protein Homology CDS 104137 105432 . + 0 ID=cds-WP_000253994.1;Parent=gene-CCO53_RS16415;Dbxref=GenBank:WP_000253994.1;Name=WP_000253994.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=CCO53_RS16415;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253994.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 105432 106865 . + . ID=gene-CCO53_RS16420;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=CCO53_RS16420;old_locus_tag=CCO53_16390 NZ_NPLZ01000009.1 Protein Homology CDS 105432 106865 . + 0 ID=cds-WP_001197674.1;Parent=gene-CCO53_RS16420;Dbxref=GenBank:WP_001197674.1;Name=WP_001197674.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=CCO53_RS16420;product=glycogen synthase GlgA;protein_id=WP_001197674.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 106885 109332 . + . ID=gene-CCO53_RS16425;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=CCO53_RS16425;old_locus_tag=CCO53_16395 NZ_NPLZ01000009.1 Protein Homology CDS 106885 109332 . + 0 ID=cds-WP_000993424.1;Parent=gene-CCO53_RS16425;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=CCO53_RS16425;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 109462 110955 . + . ID=gene-CCO53_RS16430;Name=CCO53_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16430;old_locus_tag=CCO53_16400 NZ_NPLZ01000009.1 Protein Homology CDS 109462 110955 . + 0 ID=cds-WP_058331610.1;Parent=gene-CCO53_RS16430;Dbxref=GenBank:WP_058331610.1;Name=WP_058331610.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551775.1;locus_tag=CCO53_RS16430;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_058331610.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 110965 111510 . + . ID=gene-CCO53_RS16435;Name=CCO53_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16435;old_locus_tag=CCO53_16405 NZ_NPLZ01000009.1 Protein Homology CDS 110965 111510 . + 0 ID=cds-WP_000390369.1;Parent=gene-CCO53_RS16435;Dbxref=GenBank:WP_000390369.1;Name=WP_000390369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=CCO53_RS16435;product=hypothetical protein;protein_id=WP_000390369.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 111557 113065 . - . ID=gene-CCO53_RS16440;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=CCO53_RS16440;old_locus_tag=CCO53_16410 NZ_NPLZ01000009.1 Protein Homology CDS 111557 113065 . - 0 ID=cds-WP_000448178.1;Parent=gene-CCO53_RS16440;Dbxref=GenBank:WP_000448178.1;Name=WP_000448178.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=CCO53_RS16440;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448178.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 113264 113590 . + . ID=gene-CCO53_RS16445;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=CCO53_RS16445;old_locus_tag=CCO53_16415 NZ_NPLZ01000009.1 Protein Homology CDS 113264 113590 . + 0 ID=cds-WP_023202020.1;Parent=gene-CCO53_RS16445;Dbxref=GenBank:WP_023202020.1;Name=WP_023202020.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=CCO53_RS16445;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_023202020.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 113666 114496 . + . ID=gene-CCO53_RS16450;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=CCO53_RS16450;old_locus_tag=CCO53_16420 NZ_NPLZ01000009.1 Protein Homology CDS 113666 114496 . + 0 ID=cds-WP_000928702.1;Parent=gene-CCO53_RS16450;Dbxref=GenBank:WP_000928702.1;Name=WP_000928702.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=CCO53_RS16450;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928702.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 114590 115348 . + . ID=gene-CCO53_RS16455;Name=CCO53_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16455;old_locus_tag=CCO53_16425 NZ_NPLZ01000009.1 Protein Homology CDS 114590 115348 . + 0 ID=cds-WP_000815085.1;Parent=gene-CCO53_RS16455;Dbxref=GenBank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=CCO53_RS16455;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 115345 116928 . - . ID=gene-CCO53_RS16460;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=CCO53_RS16460;old_locus_tag=CCO53_16430 NZ_NPLZ01000009.1 Protein Homology CDS 115345 116928 . - 0 ID=cds-WP_001232874.1;Parent=gene-CCO53_RS16460;Dbxref=GenBank:WP_001232874.1;Name=WP_001232874.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=CCO53_RS16460;product=RNA repair transcriptional activator RtcR;protein_id=WP_001232874.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 117118 118671 . + . ID=gene-CCO53_RS16465;Name=CCO53_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16465;old_locus_tag=CCO53_16435 NZ_NPLZ01000009.1 Protein Homology CDS 117118 118671 . + 0 ID=cds-WP_058331611.1;Parent=gene-CCO53_RS16465;Dbxref=GenBank:WP_058331611.1;Name=WP_058331611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=CCO53_RS16465;product=vWA domain-containing protein;protein_id=WP_058331611.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 118830 118946 . + . ID=gene-CCO53_RS23845;Name=CCO53_RS23845;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO53_RS23845 NZ_NPLZ01000009.1 tRNAscan-SE tRNA 118830 118946 . + . ID=rna-CCO53_RS23845;Parent=gene-CCO53_RS23845;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23845;product=tRNA-OTHER NZ_NPLZ01000009.1 tRNAscan-SE exon 118830 118946 . + . ID=exon-CCO53_RS23845-1;Parent=rna-CCO53_RS23845;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO53_RS23845;product=tRNA-OTHER NZ_NPLZ01000009.1 RefSeq gene 119025 120239 . + . ID=gene-CCO53_RS16470;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=CCO53_RS16470;old_locus_tag=CCO53_16440 NZ_NPLZ01000009.1 Protein Homology CDS 119025 120239 . + 0 ID=cds-WP_001105526.1;Parent=gene-CCO53_RS16470;Dbxref=GenBank:WP_001105526.1;Name=WP_001105526.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=CCO53_RS16470;product=RNA-splicing ligase RtcB;protein_id=WP_001105526.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 120243 121277 . + . ID=gene-CCO53_RS16475;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=CCO53_RS16475;old_locus_tag=CCO53_16445 NZ_NPLZ01000009.1 Protein Homology CDS 120243 121277 . + 0 ID=cds-WP_000101029.1;Parent=gene-CCO53_RS16475;Dbxref=GenBank:WP_000101029.1;Name=WP_000101029.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101029.1;locus_tag=CCO53_RS16475;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_000101029.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 121274 121834 . + . ID=gene-CCO53_RS16480;Name=CCO53_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16480;old_locus_tag=CCO53_16450 NZ_NPLZ01000009.1 Protein Homology CDS 121274 121834 . + 0 ID=cds-WP_000220922.1;Parent=gene-CCO53_RS16480;Dbxref=GenBank:WP_000220922.1;Name=WP_000220922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650910.1;locus_tag=CCO53_RS16480;product=hypothetical protein;protein_id=WP_000220922.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 121968 124673 . - . ID=gene-CCO53_RS16485;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=CCO53_RS16485;old_locus_tag=CCO53_16455 NZ_NPLZ01000009.1 Protein Homology CDS 121968 124673 . - 0 ID=cds-WP_058331613.1;Parent=gene-CCO53_RS16485;Dbxref=GenBank:WP_058331613.1;Name=WP_058331613.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=CCO53_RS16485;product=HTH-type transcriptional regulator MalT;protein_id=WP_058331613.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 125268 127661 . + . ID=gene-CCO53_RS16490;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=CCO53_RS16490;old_locus_tag=CCO53_16460 NZ_NPLZ01000009.1 Protein Homology CDS 125268 127661 . + 0 ID=cds-WP_000082250.1;Parent=gene-CCO53_RS16490;Dbxref=GenBank:WP_000082250.1;Name=WP_000082250.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=CCO53_RS16490;product=maltodextrin phosphorylase;protein_id=WP_000082250.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 127671 129749 . + . ID=gene-CCO53_RS16495;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=CCO53_RS16495;old_locus_tag=CCO53_16465 NZ_NPLZ01000009.1 Protein Homology CDS 127671 129749 . + 0 ID=cds-WP_080160084.1;Parent=gene-CCO53_RS16495;Dbxref=GenBank:WP_080160084.1;Name=WP_080160084.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=CCO53_RS16495;product=4-alpha-glucanotransferase;protein_id=WP_080160084.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 129868 131184 . - . ID=gene-CCO53_RS16500;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=CCO53_RS16500;old_locus_tag=CCO53_16470 NZ_NPLZ01000009.1 Protein Homology CDS 129868 131184 . - 0 ID=cds-WP_001131741.1;Parent=gene-CCO53_RS16500;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=CCO53_RS16500;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 131561 132136 . - . ID=gene-CCO53_RS16505;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=CCO53_RS16505;old_locus_tag=CCO53_16475 NZ_NPLZ01000009.1 Protein Homology CDS 131561 132136 . - 0 ID=cds-WP_000619387.1;Parent=gene-CCO53_RS16505;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=CCO53_RS16505;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 132195 132878 . - . ID=gene-CCO53_RS16510;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=CCO53_RS16510;old_locus_tag=CCO53_16480 NZ_NPLZ01000009.1 Protein Homology CDS 132195 132878 . - 0 ID=cds-WP_076935767.1;Parent=gene-CCO53_RS16510;Dbxref=GenBank:WP_076935767.1;Name=WP_076935767.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=CCO53_RS16510;product=DNA utilization protein GntX;protein_id=WP_076935767.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 132916 133686 . + . ID=gene-CCO53_RS16515;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=CCO53_RS16515;old_locus_tag=CCO53_16485 NZ_NPLZ01000009.1 Protein Homology CDS 132916 133686 . + 0 ID=cds-WP_000998138.1;Parent=gene-CCO53_RS16515;Dbxref=GenBank:WP_000998138.1;Name=WP_000998138.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=CCO53_RS16515;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998138.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 133722 134648 . - . ID=gene-CCO53_RS16520;Name=CCO53_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16520;old_locus_tag=CCO53_16490 NZ_NPLZ01000009.1 Protein Homology CDS 133722 134648 . - 0 ID=cds-WP_058331615.1;Parent=gene-CCO53_RS16520;Dbxref=GenBank:WP_058331615.1;Name=WP_058331615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=CCO53_RS16520;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_058331615.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 134883 135119 . - . ID=gene-CCO53_RS16525;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=CCO53_RS16525;old_locus_tag=CCO53_16495 NZ_NPLZ01000009.1 Protein Homology CDS 134883 135119 . - 0 ID=cds-WP_000157587.1;Parent=gene-CCO53_RS16525;Dbxref=GenBank:WP_000157587.1;Name=WP_000157587.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=CCO53_RS16525;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157587.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 135132 137450 . - . ID=gene-CCO53_RS16530;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CCO53_RS16530;old_locus_tag=CCO53_16500 NZ_NPLZ01000009.1 Protein Homology CDS 135132 137450 . - 0 ID=cds-WP_023216665.1;Parent=gene-CCO53_RS16530;Dbxref=GenBank:WP_023216665.1;Name=WP_023216665.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=CCO53_RS16530;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_023216665.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 137469 137696 . - . ID=gene-CCO53_RS16535;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=CCO53_RS16535;old_locus_tag=CCO53_16505 NZ_NPLZ01000009.1 Protein Homology CDS 137469 137696 . - 0 ID=cds-WP_001160955.1;Parent=gene-CCO53_RS16535;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=CCO53_RS16535;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 138133 140463 . - . ID=gene-CCO53_RS16545;Name=CCO53_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16545;old_locus_tag=CCO53_16515 NZ_NPLZ01000009.1 Protein Homology CDS 138133 140463 . - 0 ID=cds-WP_023138606.1;Parent=gene-CCO53_RS16545;Dbxref=GenBank:WP_023138606.1;Name=WP_023138606.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=CCO53_RS16545;product=Tex family protein;protein_id=WP_023138606.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 140562 141035 . - . ID=gene-CCO53_RS16550;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=CCO53_RS16550;old_locus_tag=CCO53_16520 NZ_NPLZ01000009.1 Protein Homology CDS 140562 141035 . - 0 ID=cds-WP_000856695.1;Parent=gene-CCO53_RS16550;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=CCO53_RS16550;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 141261 141980 . + . ID=gene-CCO53_RS16555;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=CCO53_RS16555;old_locus_tag=CCO53_16525 NZ_NPLZ01000009.1 Protein Homology CDS 141261 141980 . + 0 ID=cds-WP_001157751.1;Parent=gene-CCO53_RS16555;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=CCO53_RS16555;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 141977 143329 . + . ID=gene-CCO53_RS16560;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=CCO53_RS16560;old_locus_tag=CCO53_16530 NZ_NPLZ01000009.1 Protein Homology CDS 141977 143329 . + 0 ID=cds-WP_094887755.1;Parent=gene-CCO53_RS16560;Dbxref=GenBank:WP_094887755.1;Name=WP_094887755.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=CCO53_RS16560;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_094887755.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 143404 145023 . - . ID=gene-CCO53_RS16565;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CCO53_RS16565;old_locus_tag=CCO53_16535 NZ_NPLZ01000009.1 Protein Homology CDS 143404 145023 . - 0 ID=cds-WP_001265689.1;Parent=gene-CCO53_RS16565;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=CCO53_RS16565;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 145403 147112 . + . ID=gene-CCO53_RS16570;Name=CCO53_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16570;old_locus_tag=CCO53_16540 NZ_NPLZ01000009.1 Protein Homology CDS 145403 147112 . + 0 ID=cds-WP_061372407.1;Parent=gene-CCO53_RS16570;Dbxref=GenBank:WP_061372407.1;Name=WP_061372407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=CCO53_RS16570;product=DUF4153 domain-containing protein;protein_id=WP_061372407.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 147221 148099 . - . ID=gene-CCO53_RS16575;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CCO53_RS16575;old_locus_tag=CCO53_16545 NZ_NPLZ01000009.1 Protein Homology CDS 147221 148099 . - 0 ID=cds-WP_001135571.1;Parent=gene-CCO53_RS16575;Dbxref=GenBank:WP_001135571.1;Name=WP_001135571.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=CCO53_RS16575;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135571.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 148124 148525 . - . ID=gene-CCO53_RS16580;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=CCO53_RS16580;old_locus_tag=CCO53_16550 NZ_NPLZ01000009.1 Protein Homology CDS 148124 148525 . - 0 ID=cds-WP_000660723.1;Parent=gene-CCO53_RS16580;Dbxref=GenBank:WP_000660723.1;Name=WP_000660723.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=CCO53_RS16580;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660723.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 148536 149204 . - . ID=gene-CCO53_RS16585;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=CCO53_RS16585;old_locus_tag=CCO53_16555 NZ_NPLZ01000009.1 Protein Homology CDS 148536 149204 . - 0 ID=cds-WP_001520508.1;Parent=gene-CCO53_RS16585;Dbxref=GenBank:WP_001520508.1;Name=WP_001520508.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=CCO53_RS16585;product=GMP/IMP nucleotidase;protein_id=WP_001520508.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 149269 151401 . - . ID=gene-CCO53_RS16590;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=CCO53_RS16590;old_locus_tag=CCO53_16560 NZ_NPLZ01000009.1 Protein Homology CDS 149269 151401 . - 0 ID=cds-WP_000104092.1;Parent=gene-CCO53_RS16590;Dbxref=GenBank:WP_000104092.1;Name=WP_000104092.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=CCO53_RS16590;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104092.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 151724 152287 . + . ID=gene-CCO53_RS16595;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=CCO53_RS16595;old_locus_tag=CCO53_16565 NZ_NPLZ01000009.1 Protein Homology CDS 151724 152287 . + 0 ID=cds-WP_000045725.1;Parent=gene-CCO53_RS16595;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=CCO53_RS16595;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 152383 154935 . - . ID=gene-CCO53_RS16600;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=CCO53_RS16600;old_locus_tag=CCO53_16570 NZ_NPLZ01000009.1 Protein Homology CDS 152383 154935 . - 0 ID=cds-WP_023237398.1;Parent=gene-CCO53_RS16600;Dbxref=GenBank:WP_023237398.1;Name=WP_023237398.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=CCO53_RS16600;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_023237398.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 155056 155835 . + . ID=gene-CCO53_RS16605;Name=CCO53_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16605;old_locus_tag=CCO53_16575 NZ_NPLZ01000009.1 Protein Homology CDS 155056 155835 . + 0 ID=cds-WP_000874740.1;Parent=gene-CCO53_RS16605;Dbxref=GenBank:WP_000874740.1;Name=WP_000874740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=CCO53_RS16605;product=hypothetical protein;protein_id=WP_000874740.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 155835 156374 . + . ID=gene-CCO53_RS16610;Name=CCO53_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16610;old_locus_tag=CCO53_16580 NZ_NPLZ01000009.1 Protein Homology CDS 155835 156374 . + 0 ID=cds-WP_000951390.1;Parent=gene-CCO53_RS16610;Dbxref=GenBank:WP_000951390.1;Name=WP_000951390.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=CCO53_RS16610;product=PilN domain-containing protein;protein_id=WP_000951390.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 156358 156831 . + . ID=gene-CCO53_RS16615;Name=CCO53_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16615;old_locus_tag=CCO53_16585 NZ_NPLZ01000009.1 Protein Homology CDS 156358 156831 . + 0 ID=cds-WP_076727293.1;Parent=gene-CCO53_RS16615;Dbxref=GenBank:WP_076727293.1;Name=WP_076727293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=CCO53_RS16615;product=hypothetical protein;protein_id=WP_076727293.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 156821 157222 . + . ID=gene-CCO53_RS16620;Name=CCO53_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16620;old_locus_tag=CCO53_16590 NZ_NPLZ01000009.1 Protein Homology CDS 156821 157222 . + 0 ID=cds-WP_000868832.1;Parent=gene-CCO53_RS16620;Dbxref=GenBank:WP_000868832.1;Name=WP_000868832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=CCO53_RS16620;product=HofP DNA utilization family protein;protein_id=WP_000868832.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 157137 158375 . + . ID=gene-CCO53_RS16625;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=CCO53_RS16625;old_locus_tag=CCO53_16595 NZ_NPLZ01000009.1 Protein Homology CDS 157137 158375 . + 0 ID=cds-WP_000832801.1;Parent=gene-CCO53_RS16625;Dbxref=GenBank:WP_000832801.1;Name=WP_000832801.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=CCO53_RS16625;product=DNA uptake porin HofQ;protein_id=WP_000832801.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 158840 159361 . + . ID=gene-CCO53_RS16635;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=CCO53_RS16635;old_locus_tag=CCO53_16605 NZ_NPLZ01000009.1 Protein Homology CDS 158840 159361 . + 0 ID=cds-WP_000818621.1;Parent=gene-CCO53_RS16635;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=CCO53_RS16635;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 159418 160506 . + . ID=gene-CCO53_RS16640;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CCO53_RS16640;old_locus_tag=CCO53_16610 NZ_NPLZ01000009.1 Protein Homology CDS 159418 160506 . + 0 ID=cds-WP_000439820.1;Parent=gene-CCO53_RS16640;Dbxref=GenBank:WP_000439820.1;Name=WP_000439820.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=CCO53_RS16640;product=3-dehydroquinate synthase;protein_id=WP_000439820.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 160604 161905 . + . ID=gene-CCO53_RS16645;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=CCO53_RS16645;old_locus_tag=CCO53_16615 NZ_NPLZ01000009.1 Protein Homology CDS 160604 161905 . + 0 ID=cds-WP_094887756.1;Parent=gene-CCO53_RS16645;Dbxref=GenBank:WP_094887756.1;Name=WP_094887756.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=CCO53_RS16645;product=cell division protein DamX;protein_id=WP_094887756.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 162086 162922 . + . ID=gene-CCO53_RS16650;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=CCO53_RS16650;old_locus_tag=CCO53_16620 NZ_NPLZ01000009.1 Protein Homology CDS 162086 162922 . + 0 ID=cds-WP_000742132.1;Parent=gene-CCO53_RS16650;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=CCO53_RS16650;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 162940 163617 . + . ID=gene-CCO53_RS16655;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CCO53_RS16655;old_locus_tag=CCO53_16625 NZ_NPLZ01000009.1 Protein Homology CDS 162940 163617 . + 0 ID=cds-WP_000816286.1;Parent=gene-CCO53_RS16655;Dbxref=GenBank:WP_000816286.1;Name=WP_000816286.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=CCO53_RS16655;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816286.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 163610 164368 . + . ID=gene-CCO53_RS16660;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=CCO53_RS16660;old_locus_tag=CCO53_16630 NZ_NPLZ01000009.1 Protein Homology CDS 163610 164368 . + 0 ID=cds-WP_000359653.1;Parent=gene-CCO53_RS16660;Dbxref=GenBank:WP_000359653.1;Name=WP_000359653.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=CCO53_RS16660;product=phosphoglycolate phosphatase;protein_id=WP_000359653.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 164361 165365 . + . ID=gene-CCO53_RS16665;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO53_RS16665;old_locus_tag=CCO53_16635 NZ_NPLZ01000009.1 Protein Homology CDS 164361 165365 . + 0 ID=cds-WP_000165562.1;Parent=gene-CCO53_RS16665;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=CCO53_RS16665;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 165510 165680 . - . ID=gene-CCO53_RS16670;Name=CCO53_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16670;old_locus_tag=CCO53_16640 NZ_NPLZ01000009.1 Protein Homology CDS 165510 165680 . - 0 ID=cds-WP_000472323.1;Parent=gene-CCO53_RS16670;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=CCO53_RS16670;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 165873 171725 . - . ID=gene-CCO53_RS16675;Name=CCO53_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16675;old_locus_tag=CCO53_16645 NZ_NPLZ01000009.1 Protein Homology CDS 165873 171725 . - 0 ID=cds-WP_423825468.1;Parent=gene-CCO53_RS16675;Dbxref=GenBank:WP_423825468.1;Name=WP_423825468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663097.1;locus_tag=CCO53_RS16675;product=autotransporter adhesin BigA;protein_id=WP_423825468.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 172052 173425 . - . ID=gene-CCO53_RS16680;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=CCO53_RS16680;old_locus_tag=CCO53_16650 NZ_NPLZ01000009.1 Protein Homology CDS 172052 173425 . - 0 ID=cds-WP_000349896.1;Parent=gene-CCO53_RS16680;Dbxref=GenBank:WP_000349896.1;Name=WP_000349896.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=CCO53_RS16680;product=siroheme synthase CysG;protein_id=WP_000349896.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 173437 174246 . - . ID=gene-CCO53_RS16685;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=CCO53_RS16685;old_locus_tag=CCO53_16655 NZ_NPLZ01000009.1 Protein Homology CDS 173437 174246 . - 0 ID=cds-WP_000493576.1;Parent=gene-CCO53_RS16685;Dbxref=GenBank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=CCO53_RS16685;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 174441 174767 . - . ID=gene-CCO53_RS16690;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CCO53_RS16690;old_locus_tag=CCO53_16660 NZ_NPLZ01000009.1 Protein Homology CDS 174441 174767 . - 0 ID=cds-WP_058331619.1;Parent=gene-CCO53_RS16690;Dbxref=GenBank:WP_058331619.1;Name=WP_058331619.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571429.1;locus_tag=CCO53_RS16690;product=nitrite reductase small subunit NirD;protein_id=WP_058331619.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 174764 177307 . - . ID=gene-CCO53_RS16695;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CCO53_RS16695;old_locus_tag=CCO53_16665 NZ_NPLZ01000009.1 Protein Homology CDS 174764 177307 . - 0 ID=cds-WP_000049258.1;Parent=gene-CCO53_RS16695;Dbxref=GenBank:WP_000049258.1;Name=WP_000049258.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=CCO53_RS16695;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049258.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 177625 178806 . - . ID=gene-CCO53_RS16700;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=CCO53_RS16700;old_locus_tag=CCO53_16670 NZ_NPLZ01000009.1 Protein Homology CDS 177625 178806 . - 0 ID=cds-WP_000185267.1;Parent=gene-CCO53_RS16700;Dbxref=GenBank:WP_000185267.1;Name=WP_000185267.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=CCO53_RS16700;product=MFS transporter TsgA;protein_id=WP_000185267.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 179083 179655 . + . ID=gene-CCO53_RS16705;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=CCO53_RS16705;old_locus_tag=CCO53_16675 NZ_NPLZ01000009.1 Protein Homology CDS 179083 179655 . + 0 ID=cds-WP_000920478.1;Parent=gene-CCO53_RS16705;Dbxref=GenBank:WP_000920478.1;Name=WP_000920478.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=CCO53_RS16705;product=peptidylprolyl isomerase A;protein_id=WP_000920478.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 179764 179931 . + . ID=gene-CCO53_RS16710;Name=CCO53_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16710;old_locus_tag=CCO53_16680 NZ_NPLZ01000009.1 Protein Homology CDS 179764 179931 . + 0 ID=cds-WP_001519136.1;Parent=gene-CCO53_RS16710;Dbxref=GenBank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=CCO53_RS16710;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 179921 180523 . + . ID=gene-CCO53_RS16715;Name=CCO53_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16715;old_locus_tag=CCO53_16685 NZ_NPLZ01000009.1 Protein Homology CDS 179921 180523 . + 0 ID=cds-WP_001280665.1;Parent=gene-CCO53_RS16715;Dbxref=GenBank:WP_001280665.1;Name=WP_001280665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=CCO53_RS16715;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280665.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 180555 181118 . + . ID=gene-CCO53_RS16720;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=CCO53_RS16720;old_locus_tag=CCO53_16690 NZ_NPLZ01000009.1 Protein Homology CDS 180555 181118 . + 0 ID=cds-WP_001626895.1;Parent=gene-CCO53_RS16720;Dbxref=GenBank:WP_001626895.1;Name=WP_001626895.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=CCO53_RS16720;product=aminodeoxychorismate synthase component 2;protein_id=WP_001626895.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 181204 182421 . + . ID=gene-CCO53_RS16725;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=CCO53_RS16725;old_locus_tag=CCO53_16695 NZ_NPLZ01000009.1 Protein Homology CDS 181204 182421 . + 0 ID=cds-WP_000190025.1;Parent=gene-CCO53_RS16725;Dbxref=GenBank:WP_000190025.1;Name=WP_000190025.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=CCO53_RS16725;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000190025.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 182464 184551 . - . ID=gene-CCO53_RS16730;Name=CCO53_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16730;old_locus_tag=CCO53_16700 NZ_NPLZ01000009.1 Protein Homology CDS 182464 184551 . - 0 ID=cds-WP_000269311.1;Parent=gene-CCO53_RS16730;Dbxref=GenBank:WP_000269311.1;Name=WP_000269311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=CCO53_RS16730;product=YccS/YhfK family putative transporter;protein_id=WP_000269311.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 184600 185232 . - . ID=gene-CCO53_RS16735;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=CCO53_RS16735;old_locus_tag=CCO53_16705 NZ_NPLZ01000009.1 Protein Homology CDS 184600 185232 . - 0 ID=cds-WP_000242758.1;Parent=gene-CCO53_RS16735;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=CCO53_RS16735;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 185540 185944 . + . ID=gene-CCO53_RS16740;Name=CCO53_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16740;old_locus_tag=CCO53_16710 NZ_NPLZ01000009.1 Protein Homology CDS 185540 185944 . + 0 ID=cds-WP_001148919.1;Parent=gene-CCO53_RS16740;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=CCO53_RS16740;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 186040 186909 . - . ID=gene-CCO53_RS16745;Name=CCO53_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16745;old_locus_tag=CCO53_16715 NZ_NPLZ01000009.1 Protein Homology CDS 186040 186909 . - 0 ID=cds-WP_001274690.1;Parent=gene-CCO53_RS16745;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=CCO53_RS16745;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 186961 187179 . - . ID=gene-CCO53_RS16750;Name=CCO53_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16750;old_locus_tag=CCO53_16720 NZ_NPLZ01000009.1 Protein Homology CDS 186961 187179 . - 0 ID=cds-WP_000586568.1;Parent=gene-CCO53_RS16750;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=CCO53_RS16750;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 187176 188243 . - . ID=gene-CCO53_RS16755;Name=CCO53_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16755;old_locus_tag=CCO53_16725 NZ_NPLZ01000009.1 Protein Homology CDS 187176 188243 . - 0 ID=cds-WP_001214115.1;Parent=gene-CCO53_RS16755;Dbxref=GenBank:WP_001214115.1;Name=WP_001214115.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=CCO53_RS16755;product=hydrolase;protein_id=WP_001214115.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 188441 188752 . + . ID=gene-CCO53_RS16760;Name=CCO53_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16760;old_locus_tag=CCO53_16730 NZ_NPLZ01000009.1 Protein Homology CDS 188441 188752 . + 0 ID=cds-WP_058331621.1;Parent=gene-CCO53_RS16760;Dbxref=GenBank:WP_058331621.1;Name=WP_058331621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=CCO53_RS16760;product=monooxygenase;protein_id=WP_058331621.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 188754 188975 . - . ID=gene-CCO53_RS16765;Name=CCO53_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16765;old_locus_tag=CCO53_16735 NZ_NPLZ01000009.1 Protein Homology CDS 188754 188975 . - 0 ID=cds-WP_058331622.1;Parent=gene-CCO53_RS16765;Dbxref=GenBank:WP_058331622.1;Name=WP_058331622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=CCO53_RS16765;product=hypothetical protein;protein_id=WP_058331622.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 189138 191045 . - . ID=gene-CCO53_RS16770;Name=CCO53_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16770;old_locus_tag=CCO53_16740 NZ_NPLZ01000009.1 Protein Homology CDS 189138 191045 . - 0 ID=cds-WP_000634758.1;Parent=gene-CCO53_RS16770;Dbxref=GenBank:WP_000634758.1;Name=WP_000634758.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=CCO53_RS16770;product=ABC transporter ATP-binding protein;protein_id=WP_000634758.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 191311 191862 . + . ID=gene-CCO53_RS16775;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=CCO53_RS16775;old_locus_tag=CCO53_16745 NZ_NPLZ01000009.1 Protein Homology CDS 191311 191862 . + 0 ID=cds-WP_000081820.1;Parent=gene-CCO53_RS16775;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=CCO53_RS16775;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 191862 193667 . + . ID=gene-CCO53_RS16780;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=CCO53_RS16780;old_locus_tag=CCO53_16750 NZ_NPLZ01000009.1 Protein Homology CDS 191862 193667 . + 0 ID=cds-WP_080210081.1;Parent=gene-CCO53_RS16780;Dbxref=GenBank:WP_080210081.1;Name=WP_080210081.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=CCO53_RS16780;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_080210081.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 193677 193877 . + . ID=gene-CCO53_RS16785;Name=CCO53_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16785;old_locus_tag=CCO53_16755 NZ_NPLZ01000009.1 Protein Homology CDS 193677 193877 . + 0 ID=cds-WP_001007735.1;Parent=gene-CCO53_RS16785;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=CCO53_RS16785;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 193972 194562 . + . ID=gene-CCO53_RS16790;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=CCO53_RS16790;old_locus_tag=CCO53_16760 NZ_NPLZ01000009.1 Protein Homology CDS 193972 194562 . + 0 ID=cds-WP_000861341.1;Parent=gene-CCO53_RS16790;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=CCO53_RS16790;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 194751 194969 . - . ID=gene-CCO53_RS16795;Name=CCO53_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16795;old_locus_tag=CCO53_16765 NZ_NPLZ01000009.1 Protein Homology CDS 194751 194969 . - 0 ID=cds-WP_001152701.1;Parent=gene-CCO53_RS16795;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=CCO53_RS16795;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 195189 196007 . + . ID=gene-CCO53_RS16800;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=CCO53_RS16800;old_locus_tag=CCO53_16770 NZ_NPLZ01000009.1 Protein Homology CDS 195189 196007 . + 0 ID=cds-WP_000838225.1;Parent=gene-CCO53_RS16800;Dbxref=GenBank:WP_000838225.1;Name=WP_000838225.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=CCO53_RS16800;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838225.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 196283 197005 . + . ID=gene-CCO53_RS16805;Name=CCO53_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16805;old_locus_tag=CCO53_16775 NZ_NPLZ01000009.1 Protein Homology CDS 196283 197005 . + 0 ID=cds-WP_000091471.1;Parent=gene-CCO53_RS16805;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=CCO53_RS16805;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 197005 197391 . + . ID=gene-CCO53_RS16810;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=CCO53_RS16810;old_locus_tag=CCO53_16780 NZ_NPLZ01000009.1 Protein Homology CDS 197005 197391 . + 0 ID=cds-WP_001268011.1;Parent=gene-CCO53_RS16810;Dbxref=GenBank:WP_001268011.1;Name=WP_001268011.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=CCO53_RS16810;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268011.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 197391 197747 . + . ID=gene-CCO53_RS16815;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=CCO53_RS16815;old_locus_tag=CCO53_16785 NZ_NPLZ01000009.1 Protein Homology CDS 197391 197747 . + 0 ID=cds-WP_000820705.1;Parent=gene-CCO53_RS16815;Dbxref=GenBank:WP_000820705.1;Name=WP_000820705.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=CCO53_RS16815;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820705.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 197755 198042 . + . ID=gene-CCO53_RS16820;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=CCO53_RS16820;old_locus_tag=CCO53_16790 NZ_NPLZ01000009.1 Protein Homology CDS 197755 198042 . + 0 ID=cds-WP_000903400.1;Parent=gene-CCO53_RS16820;Dbxref=GenBank:WP_000903400.1;Name=WP_000903400.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=CCO53_RS16820;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903400.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 198168 198542 . + . ID=gene-CCO53_RS16825;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CCO53_RS16825;old_locus_tag=CCO53_16795 NZ_NPLZ01000009.1 Protein Homology CDS 198168 198542 . + 0 ID=cds-WP_000246815.1;Parent=gene-CCO53_RS16825;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=CCO53_RS16825;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 198638 199108 . + . ID=gene-CCO53_RS16830;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CCO53_RS16830;old_locus_tag=CCO53_16800 NZ_NPLZ01000009.1 Protein Homology CDS 198638 199108 . + 0 ID=cds-WP_001138042.1;Parent=gene-CCO53_RS16830;Dbxref=GenBank:WP_001138042.1;Name=WP_001138042.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=CCO53_RS16830;product=30S ribosomal protein S7;protein_id=WP_001138042.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 199205 201319 . + . ID=gene-CCO53_RS16835;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CCO53_RS16835;old_locus_tag=CCO53_16805 NZ_NPLZ01000009.1 Protein Homology CDS 199205 201319 . + 0 ID=cds-WP_000124693.1;Parent=gene-CCO53_RS16835;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=CCO53_RS16835;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_NPLZ01000009.1 RefSeq gene 201391 201676 . + . ID=gene-CCO53_RS16840;Name=CCO53_RS16840;end_range=201676,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO53_RS16840;old_locus_tag=CCO53_16810;partial=true NZ_NPLZ01000009.1 Protein Homology CDS 201391 201676 . + 0 ID=cds-WP_000031682.1-2;Parent=gene-CCO53_RS16840;Dbxref=GenBank:WP_000031682.1;Name=WP_000031682.1;Ontology_term=GO:0003924,GO:0005525;end_range=201676,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO53_RS16840;partial=true;product=GTP-binding protein;protein_id=WP_000031682.1;transl_table=11 ###