##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM226616v1 #!genome-build-accession NCBI_Assembly:GCF_002266165.1 #!annotation-date 04/15/2025 21:40:11 #!annotation-source NCBI RefSeq GCF_002266165.1-RS_2025_04_15 ##sequence-region NZ_NPMC01000001.1 1 568070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000001.1 RefSeq region 1 568070 . + . ID=NZ_NPMC01000001.1:1..568070;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000001.1 RefSeq pseudogene 179 278 . - . ID=gene-CCO57_RS24430;Name=CCO57_RS24430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24430;partial=true;pseudo=true;start_range=.,179 NZ_NPMC01000001.1 Protein Homology CDS 179 278 . - 0 ID=cds-CCO57_RS24430;Parent=gene-CCO57_RS24430;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=CCO57_RS24430;partial=true;product=hypothetical protein;pseudo=true;start_range=.,179;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 298 480 . + . ID=gene-CCO57_RS24435;Name=CCO57_RS24435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24435;old_locus_tag=CCO57_00010 NZ_NPMC01000001.1 Protein Homology CDS 298 480 . + 0 ID=cds-WP_001527266.1;Parent=gene-CCO57_RS24435;Dbxref=GenBank:WP_001527266.1;Name=WP_001527266.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=CCO57_RS24435;product=ATP-binding cassette domain-containing protein;protein_id=WP_001527266.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 473 760 . - . ID=gene-CCO57_RS00015;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=CCO57_RS00015;old_locus_tag=CCO57_00015 NZ_NPMC01000001.1 Protein Homology CDS 473 760 . - 0 ID=cds-WP_001269916.1;Parent=gene-CCO57_RS00015;Dbxref=GenBank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=CCO57_RS00015;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 757 1632 . - . ID=gene-CCO57_RS00020;Name=CCO57_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00020;old_locus_tag=CCO57_00020 NZ_NPMC01000001.1 Protein Homology CDS 757 1632 . - 0 ID=cds-WP_000921676.1;Parent=gene-CCO57_RS00020;Dbxref=GenBank:WP_000921676.1;Name=WP_000921676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=CCO57_RS00020;product=AraC family transcriptional regulator;protein_id=WP_000921676.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 1896 2118 . - . ID=gene-CCO57_RS24440;Name=CCO57_RS24440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24440;pseudo=true NZ_NPMC01000001.1 Protein Homology CDS 1896 2118 . - 0 ID=cds-CCO57_RS24440;Parent=gene-CCO57_RS24440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=CCO57_RS24440;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 2436 2729 . + . ID=gene-CCO57_RS00025;Name=CCO57_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00025;old_locus_tag=CCO57_00025 NZ_NPMC01000001.1 Protein Homology CDS 2436 2729 . + 0 ID=cds-WP_001110453.1;Parent=gene-CCO57_RS00025;Dbxref=GenBank:WP_001110453.1;Name=WP_001110453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=CCO57_RS00025;product=DUF1778 domain-containing protein;protein_id=WP_001110453.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 2726 3217 . + . ID=gene-CCO57_RS00030;Name=CCO57_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00030;old_locus_tag=CCO57_00030 NZ_NPMC01000001.1 Protein Homology CDS 2726 3217 . + 0 ID=cds-WP_000622305.1;Parent=gene-CCO57_RS00030;Dbxref=GenBank:WP_000622305.1;Name=WP_000622305.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=CCO57_RS00030;product=GNAT family N-acetyltransferase;protein_id=WP_000622305.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 3514 4266 . - . ID=gene-CCO57_RS00035;Name=CCO57_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00035;old_locus_tag=CCO57_00035 NZ_NPMC01000001.1 Protein Homology CDS 3514 4266 . - 0 ID=cds-WP_000842411.1;Parent=gene-CCO57_RS00035;Dbxref=GenBank:WP_000842411.1;Name=WP_000842411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=CCO57_RS00035;product=non-specific acid phosphatase;protein_id=WP_000842411.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 4820 4897 . + . ID=gene-CCO57_RS24830;Name=CCO57_RS24830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24830;old_locus_tag=CCO57_00040;partial=true;pseudo=true;start_range=.,4820 NZ_NPMC01000001.1 Protein Homology CDS 4820 4897 . + 0 ID=cds-CCO57_RS24830;Parent=gene-CCO57_RS24830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193311.1;locus_tag=CCO57_RS24830;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,4820;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 4977 5052 . - . ID=gene-CCO57_RS00045;Name=CCO57_RS00045;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS00045;old_locus_tag=CCO57_00045 NZ_NPMC01000001.1 tRNAscan-SE tRNA 4977 5052 . - . ID=rna-CCO57_RS00045;Parent=gene-CCO57_RS00045;anticodon=(pos:complement(5017..5019));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS00045;product=tRNA-Phe NZ_NPMC01000001.1 tRNAscan-SE exon 4977 5052 . - . ID=exon-CCO57_RS00045-1;Parent=rna-CCO57_RS00045;anticodon=(pos:complement(5017..5019));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS00045;product=tRNA-Phe NZ_NPMC01000001.1 RefSeq gene 5169 5744 . - . ID=gene-CCO57_RS00050;Name=CCO57_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00050;old_locus_tag=CCO57_00050 NZ_NPMC01000001.1 Protein Homology CDS 5169 5744 . - 0 ID=cds-WP_001188511.1;Parent=gene-CCO57_RS00050;Dbxref=GenBank:WP_001188511.1;Name=WP_001188511.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=CCO57_RS00050;product=transcriptional regulator;protein_id=WP_001188511.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 5781 7484 . - . ID=gene-CCO57_RS00055;Name=CCO57_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00055;old_locus_tag=CCO57_00055 NZ_NPMC01000001.1 Protein Homology CDS 5781 7484 . - 0 ID=cds-WP_000068893.1;Parent=gene-CCO57_RS00055;Dbxref=GenBank:WP_000068893.1;Name=WP_000068893.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=CCO57_RS00055;product=protein-disulfide reductase DsbD;protein_id=WP_000068893.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 7460 7807 . - . ID=gene-CCO57_RS00060;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=CCO57_RS00060;old_locus_tag=CCO57_00060 NZ_NPMC01000001.1 Protein Homology CDS 7460 7807 . - 0 ID=cds-WP_023212832.1;Parent=gene-CCO57_RS00060;Dbxref=GenBank:WP_023212832.1;Name=WP_023212832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=CCO57_RS00060;product=divalent cation tolerance protein CutA;protein_id=WP_023212832.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 7928 9229 . - . ID=gene-CCO57_RS00065;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=CCO57_RS00065;old_locus_tag=CCO57_00065 NZ_NPMC01000001.1 Protein Homology CDS 7928 9229 . - 0 ID=cds-WP_000637595.1;Parent=gene-CCO57_RS00065;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=CCO57_RS00065;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 9344 10780 . - . ID=gene-CCO57_RS00070;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=CCO57_RS00070;old_locus_tag=CCO57_00070 NZ_NPMC01000001.1 Protein Homology CDS 9344 10780 . - 0 ID=cds-WP_000069440.1;Parent=gene-CCO57_RS00070;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=CCO57_RS00070;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 11121 11597 . + . ID=gene-CCO57_RS00075;Name=CCO57_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00075;old_locus_tag=CCO57_00075 NZ_NPMC01000001.1 Protein Homology CDS 11121 11597 . + 0 ID=cds-WP_001267291.1;Parent=gene-CCO57_RS00075;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=CCO57_RS00075;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 11656 12897 . - . ID=gene-CCO57_RS00080;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=CCO57_RS00080;old_locus_tag=CCO57_00080 NZ_NPMC01000001.1 Protein Homology CDS 11656 12897 . - 0 ID=cds-WP_023199022.1;Parent=gene-CCO57_RS00080;Dbxref=GenBank:WP_023199022.1;Name=WP_023199022.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=CCO57_RS00080;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_023199022.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 13173 13466 . + . ID=gene-CCO57_RS00085;Name=CCO57_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00085;old_locus_tag=CCO57_00085 NZ_NPMC01000001.1 Protein Homology CDS 13173 13466 . + 0 ID=cds-WP_000027827.1;Parent=gene-CCO57_RS00085;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=CCO57_RS00085;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 13510 15156 . + . ID=gene-CCO57_RS00090;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CCO57_RS00090;old_locus_tag=CCO57_00090 NZ_NPMC01000001.1 Protein Homology CDS 13510 15156 . + 0 ID=cds-WP_000729126.1;Parent=gene-CCO57_RS00090;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=CCO57_RS00090;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 15400 15753 . + . ID=gene-CCO57_RS00095;Name=CCO57_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00095;old_locus_tag=CCO57_00095 NZ_NPMC01000001.1 Protein Homology CDS 15400 15753 . + 0 ID=cds-WP_000558210.1;Parent=gene-CCO57_RS00095;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=CCO57_RS00095;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 15801 16658 . - . ID=gene-CCO57_RS00100;Name=CCO57_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00100;old_locus_tag=CCO57_00100 NZ_NPMC01000001.1 Protein Homology CDS 15801 16658 . - 0 ID=cds-WP_001229227.1;Parent=gene-CCO57_RS00100;Dbxref=GenBank:WP_001229227.1;Name=WP_001229227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=CCO57_RS00100;product=YjeJ family protein;protein_id=WP_001229227.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 16939 17967 . - . ID=gene-CCO57_RS00105;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=CCO57_RS00105;old_locus_tag=CCO57_00105 NZ_NPMC01000001.1 Protein Homology CDS 16939 17967 . - 0 ID=cds-WP_094914751.1;Parent=gene-CCO57_RS00105;Dbxref=GenBank:WP_094914751.1;Name=WP_094914751.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313154.1;locus_tag=CCO57_RS00105;product=EF-P beta-lysylation protein EpmB;protein_id=WP_094914751.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 18008 18574 . + . ID=gene-CCO57_RS00110;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CCO57_RS00110;old_locus_tag=CCO57_00110 NZ_NPMC01000001.1 Protein Homology CDS 18008 18574 . + 0 ID=cds-WP_000257282.1;Parent=gene-CCO57_RS00110;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=CCO57_RS00110;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 18635 18769 . + . ID=gene-CCO57_RS00115;Name=CCO57_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00115;old_locus_tag=CCO57_00115 NZ_NPMC01000001.1 Protein Homology CDS 18635 18769 . + 0 ID=cds-WP_001670700.1;Parent=gene-CCO57_RS00115;Dbxref=GenBank:WP_001670700.1;Name=WP_001670700.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=CCO57_RS00115;product=entericidin A/B family lipoprotein;protein_id=WP_001670700.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 18877 19023 . + . ID=gene-CCO57_RS00120;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=CCO57_RS00120;old_locus_tag=CCO57_00120 NZ_NPMC01000001.1 Protein Homology CDS 18877 19023 . + 0 ID=cds-WP_000239598.1;Parent=gene-CCO57_RS00120;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=CCO57_RS00120;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 19054 19641 . - . ID=gene-CCO57_RS00125;Name=CCO57_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00125;old_locus_tag=CCO57_00125 NZ_NPMC01000001.1 Protein Homology CDS 19054 19641 . - 0 ID=cds-WP_000912959.1;Parent=gene-CCO57_RS00125;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=CCO57_RS00125;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 19897 20214 . + . ID=gene-CCO57_RS00130;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=CCO57_RS00130;old_locus_tag=CCO57_00130 NZ_NPMC01000001.1 Protein Homology CDS 19897 20214 . + 0 ID=cds-WP_000118469.1;Parent=gene-CCO57_RS00130;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=CCO57_RS00130;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 20231 20764 . - . ID=gene-CCO57_RS00135;Name=CCO57_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00135;old_locus_tag=CCO57_00135 NZ_NPMC01000001.1 Protein Homology CDS 20231 20764 . - 0 ID=cds-WP_001221670.1;Parent=gene-CCO57_RS00135;Dbxref=GenBank:WP_001221670.1;Name=WP_001221670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=CCO57_RS00135;product=lipocalin family protein;protein_id=WP_001221670.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 20875 21234 . - . ID=gene-CCO57_RS00140;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=CCO57_RS00140;old_locus_tag=CCO57_00140 NZ_NPMC01000001.1 Protein Homology CDS 20875 21234 . - 0 ID=cds-WP_000609650.1;Parent=gene-CCO57_RS00140;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=CCO57_RS00140;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 21245 21640 . - . ID=gene-CCO57_RS00145;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=CCO57_RS00145;old_locus_tag=CCO57_00145 NZ_NPMC01000001.1 Protein Homology CDS 21245 21640 . - 0 ID=cds-WP_000208749.1;Parent=gene-CCO57_RS00145;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=CCO57_RS00145;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 21651 22385 . - . ID=gene-CCO57_RS00150;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=CCO57_RS00150;old_locus_tag=CCO57_00150 NZ_NPMC01000001.1 Protein Homology CDS 21651 22385 . - 0 ID=cds-WP_000829509.1;Parent=gene-CCO57_RS00150;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=CCO57_RS00150;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 22378 24168 . - . ID=gene-CCO57_RS00155;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=CCO57_RS00155;old_locus_tag=CCO57_00155 NZ_NPMC01000001.1 Protein Homology CDS 22378 24168 . - 0 ID=cds-WP_001192952.1;Parent=gene-CCO57_RS00155;Dbxref=GenBank:WP_001192952.1;Name=WP_001192952.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=CCO57_RS00155;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192952.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 24491 25468 . + . ID=gene-CCO57_RS00160;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=CCO57_RS00160;old_locus_tag=CCO57_00160 NZ_NPMC01000001.1 Protein Homology CDS 24491 25468 . + 0 ID=cds-WP_000004797.1;Parent=gene-CCO57_RS00160;Dbxref=GenBank:WP_000004797.1;Name=WP_000004797.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=CCO57_RS00160;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004797.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 25694 27196 . + . ID=gene-CCO57_RS00165;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=CCO57_RS00165;old_locus_tag=CCO57_00165 NZ_NPMC01000001.1 Protein Homology CDS 25694 27196 . + 0 ID=cds-WP_094914752.1;Parent=gene-CCO57_RS00165;Dbxref=GenBank:WP_094914752.1;Name=WP_094914752.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=CCO57_RS00165;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_094914752.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 27258 30584 . - . ID=gene-CCO57_RS00170;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=CCO57_RS00170;old_locus_tag=CCO57_00170 NZ_NPMC01000001.1 Protein Homology CDS 27258 30584 . - 0 ID=cds-WP_094914753.1;Parent=gene-CCO57_RS00170;Dbxref=GenBank:WP_094914753.1;Name=WP_094914753.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=CCO57_RS00170;product=miniconductance mechanosensitive channel MscM;protein_id=WP_094914753.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 30603 31571 . - . ID=gene-CCO57_RS00175;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO57_RS00175;old_locus_tag=CCO57_00175 NZ_NPMC01000001.1 Protein Homology CDS 30603 31571 . - 0 ID=cds-WP_000934949.1;Parent=gene-CCO57_RS00175;Dbxref=GenBank:WP_000934949.1;Name=WP_000934949.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=CCO57_RS00175;product=archaetidylserine decarboxylase;protein_id=WP_000934949.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 31663 32715 . - . ID=gene-CCO57_RS00180;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CCO57_RS00180;old_locus_tag=CCO57_00180 NZ_NPMC01000001.1 Protein Homology CDS 31663 32715 . - 0 ID=cds-WP_176453478.1;Parent=gene-CCO57_RS00180;Dbxref=GenBank:WP_176453478.1;Name=WP_176453478.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=CCO57_RS00180;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_176453478.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 32822 33367 . + . ID=gene-CCO57_RS00185;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=CCO57_RS00185;old_locus_tag=CCO57_00185 NZ_NPMC01000001.1 Protein Homology CDS 32822 33367 . + 0 ID=cds-WP_001271546.1;Parent=gene-CCO57_RS00185;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=CCO57_RS00185;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 33429 34169 . - . ID=gene-CCO57_RS00190;Name=CCO57_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00190;old_locus_tag=CCO57_00190 NZ_NPMC01000001.1 Protein Homology CDS 33429 34169 . - 0 ID=cds-WP_000727892.1;Parent=gene-CCO57_RS00190;Dbxref=GenBank:WP_000727892.1;Name=WP_000727892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=CCO57_RS00190;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727892.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 34445 34520 . + . ID=gene-CCO57_RS00195;Name=CCO57_RS00195;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS00195;old_locus_tag=CCO57_00195 NZ_NPMC01000001.1 tRNAscan-SE tRNA 34445 34520 . + . ID=rna-CCO57_RS00195;Parent=gene-CCO57_RS00195;anticodon=(pos:34478..34480);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS00195;product=tRNA-Gly NZ_NPMC01000001.1 tRNAscan-SE exon 34445 34520 . + . ID=exon-CCO57_RS00195-1;Parent=rna-CCO57_RS00195;anticodon=(pos:34478..34480);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS00195;product=tRNA-Gly NZ_NPMC01000001.1 RefSeq gene 34558 34633 . + . ID=gene-CCO57_RS00200;Name=CCO57_RS00200;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS00200;old_locus_tag=CCO57_00200 NZ_NPMC01000001.1 tRNAscan-SE tRNA 34558 34633 . + . ID=rna-CCO57_RS00200;Parent=gene-CCO57_RS00200;anticodon=(pos:34591..34593);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS00200;product=tRNA-Gly NZ_NPMC01000001.1 tRNAscan-SE exon 34558 34633 . + . ID=exon-CCO57_RS00200-1;Parent=rna-CCO57_RS00200;anticodon=(pos:34591..34593);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS00200;product=tRNA-Gly NZ_NPMC01000001.1 RefSeq gene 34789 34864 . + . ID=gene-CCO57_RS00205;Name=CCO57_RS00205;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS00205;old_locus_tag=CCO57_00205 NZ_NPMC01000001.1 tRNAscan-SE tRNA 34789 34864 . + . ID=rna-CCO57_RS00205;Parent=gene-CCO57_RS00205;anticodon=(pos:34822..34824);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS00205;product=tRNA-Gly NZ_NPMC01000001.1 tRNAscan-SE exon 34789 34864 . + . ID=exon-CCO57_RS00205-1;Parent=rna-CCO57_RS00205;anticodon=(pos:34822..34824);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS00205;product=tRNA-Gly NZ_NPMC01000001.1 RefSeq gene 35134 36273 . - . ID=gene-CCO57_RS00210;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CCO57_RS00210;old_locus_tag=CCO57_00210 NZ_NPMC01000001.1 Protein Homology CDS 35134 36273 . - 0 ID=cds-WP_001670426.1;Parent=gene-CCO57_RS00210;Dbxref=GenBank:WP_001670426.1;Name=WP_001670426.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=CCO57_RS00210;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001670426.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 36272 37819 . + . ID=gene-CCO57_RS00215;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=CCO57_RS00215;old_locus_tag=CCO57_00215 NZ_NPMC01000001.1 Protein Homology CDS 36272 37819 . + 0 ID=cds-WP_000968675.1;Parent=gene-CCO57_RS00215;Dbxref=GenBank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=CCO57_RS00215;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 37791 38252 . + . ID=gene-CCO57_RS00220;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CCO57_RS00220;old_locus_tag=CCO57_00220 NZ_NPMC01000001.1 Protein Homology CDS 37791 38252 . + 0 ID=cds-WP_000981984.1;Parent=gene-CCO57_RS00220;Dbxref=GenBank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=CCO57_RS00220;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 38269 39588 . + . ID=gene-CCO57_RS00225;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=CCO57_RS00225;old_locus_tag=CCO57_00225 NZ_NPMC01000001.1 Protein Homology CDS 38269 39588 . + 0 ID=cds-WP_000640362.1;Parent=gene-CCO57_RS00225;Dbxref=GenBank:WP_000640362.1;Name=WP_000640362.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=CCO57_RS00225;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640362.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 39598 41454 . + . ID=gene-CCO57_RS00230;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CCO57_RS00230;old_locus_tag=CCO57_00230 NZ_NPMC01000001.1 Protein Homology CDS 39598 41454 . + 0 ID=cds-WP_094914755.1;Parent=gene-CCO57_RS00230;Dbxref=GenBank:WP_094914755.1;Name=WP_094914755.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=CCO57_RS00230;product=DNA mismatch repair endonuclease MutL;protein_id=WP_094914755.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 41447 42397 . + . ID=gene-CCO57_RS00235;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CCO57_RS00235;old_locus_tag=CCO57_00235 NZ_NPMC01000001.1 Protein Homology CDS 41447 42397 . + 0 ID=cds-WP_001000734.1;Parent=gene-CCO57_RS00235;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=CCO57_RS00235;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 42480 42788 . + . ID=gene-CCO57_RS00240;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CCO57_RS00240;old_locus_tag=CCO57_00240 NZ_NPMC01000001.1 Protein Homology CDS 42480 42788 . + 0 ID=cds-WP_001051875.1;Parent=gene-CCO57_RS00240;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=CCO57_RS00240;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 42860 44140 . + . ID=gene-CCO57_RS00245;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CCO57_RS00245;old_locus_tag=CCO57_00245 NZ_NPMC01000001.1 Protein Homology CDS 42860 44140 . + 0 ID=cds-WP_000460338.1;Parent=gene-CCO57_RS00245;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=CCO57_RS00245;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 44355 45614 . + . ID=gene-CCO57_RS00250;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=CCO57_RS00250;old_locus_tag=CCO57_00250 NZ_NPMC01000001.1 Protein Homology CDS 44355 45614 . + 0 ID=cds-WP_000312505.1;Parent=gene-CCO57_RS00250;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=CCO57_RS00250;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 45617 46621 . + . ID=gene-CCO57_RS00255;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=CCO57_RS00255;old_locus_tag=CCO57_00255 NZ_NPMC01000001.1 Protein Homology CDS 45617 46621 . + 0 ID=cds-WP_001232417.1;Parent=gene-CCO57_RS00255;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=CCO57_RS00255;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 46700 46897 . + . ID=gene-CCO57_RS00260;Name=CCO57_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00260;old_locus_tag=CCO57_00260 NZ_NPMC01000001.1 Protein Homology CDS 46700 46897 . + 0 ID=cds-WP_001089290.1;Parent=gene-CCO57_RS00260;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=CCO57_RS00260;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 47000 48298 . + . ID=gene-CCO57_RS00265;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=CCO57_RS00265;old_locus_tag=CCO57_00265 NZ_NPMC01000001.1 Protein Homology CDS 47000 48298 . + 0 ID=cds-WP_000527972.1;Parent=gene-CCO57_RS00265;Dbxref=GenBank:WP_000527972.1;Name=WP_000527972.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=CCO57_RS00265;product=adenylosuccinate synthase;protein_id=WP_000527972.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 48518 48943 . + . ID=gene-CCO57_RS00275;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=CCO57_RS00275;old_locus_tag=CCO57_00275 NZ_NPMC01000001.1 Protein Homology CDS 48518 48943 . + 0 ID=cds-WP_001177632.1;Parent=gene-CCO57_RS00275;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=CCO57_RS00275;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 48981 51419 . + . ID=gene-CCO57_RS00280;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CCO57_RS00280;old_locus_tag=CCO57_00280 NZ_NPMC01000001.1 Protein Homology CDS 48981 51419 . + 0 ID=cds-WP_000076351.1;Parent=gene-CCO57_RS00280;Dbxref=GenBank:WP_000076351.1;Name=WP_000076351.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=CCO57_RS00280;product=ribonuclease R;protein_id=WP_000076351.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 51510 52241 . + . ID=gene-CCO57_RS00285;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CCO57_RS00285;old_locus_tag=CCO57_00285 NZ_NPMC01000001.1 Protein Homology CDS 51510 52241 . + 0 ID=cds-WP_001293274.1;Parent=gene-CCO57_RS00285;Dbxref=GenBank:WP_001293274.1;Name=WP_001293274.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=CCO57_RS00285;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293274.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 52374 52778 . + . ID=gene-CCO57_RS00290;Name=CCO57_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00290;old_locus_tag=CCO57_00290 NZ_NPMC01000001.1 Protein Homology CDS 52374 52778 . + 0 ID=cds-WP_000312612.1;Parent=gene-CCO57_RS00290;Dbxref=GenBank:WP_000312612.1;Name=WP_000312612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=CCO57_RS00290;product=YjfI family protein;protein_id=WP_000312612.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 52793 53491 . + . ID=gene-CCO57_RS00295;Name=CCO57_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00295;old_locus_tag=CCO57_00295 NZ_NPMC01000001.1 Protein Homology CDS 52793 53491 . + 0 ID=cds-WP_000511975.1;Parent=gene-CCO57_RS00295;Dbxref=GenBank:WP_000511975.1;Name=WP_000511975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=CCO57_RS00295;product=PspA/IM30 family protein;protein_id=WP_000511975.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 53491 53592 . + . ID=gene-CCO57_RS24450;Name=CCO57_RS24450;end_range=53592,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24450;partial=true;pseudo=true NZ_NPMC01000001.1 Protein Homology CDS 53491 53592 . + 0 ID=cds-CCO57_RS24450;Parent=gene-CCO57_RS24450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=53592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=CCO57_RS24450;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 53707 54390 . + . ID=gene-CCO57_RS00300;Name=CCO57_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00300;old_locus_tag=CCO57_00300 NZ_NPMC01000001.1 Protein Homology CDS 53707 54390 . + 0 ID=cds-WP_000090296.1;Parent=gene-CCO57_RS00300;Dbxref=GenBank:WP_000090296.1;Name=WP_000090296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090296.1;locus_tag=CCO57_RS00300;product=YjfK family protein;protein_id=WP_000090296.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 54408 54806 . + . ID=gene-CCO57_RS00305;Name=CCO57_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00305;old_locus_tag=CCO57_00305 NZ_NPMC01000001.1 Protein Homology CDS 54408 54806 . + 0 ID=cds-WP_000547736.1;Parent=gene-CCO57_RS00305;Dbxref=GenBank:WP_000547736.1;Name=WP_000547736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=CCO57_RS00305;product=DUF350 domain-containing protein;protein_id=WP_000547736.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 54816 55454 . + . ID=gene-CCO57_RS00310;Name=CCO57_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00310;old_locus_tag=CCO57_00310 NZ_NPMC01000001.1 Protein Homology CDS 54816 55454 . + 0 ID=cds-WP_001085585.1;Parent=gene-CCO57_RS00310;Dbxref=GenBank:WP_001085585.1;Name=WP_001085585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=CCO57_RS00310;product=DUF1190 domain-containing protein;protein_id=WP_001085585.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 55457 56620 . + . ID=gene-CCO57_RS00315;Name=CCO57_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00315;old_locus_tag=CCO57_00315 NZ_NPMC01000001.1 Protein Homology CDS 55457 56620 . + 0 ID=cds-WP_000943945.1;Parent=gene-CCO57_RS00315;Dbxref=GenBank:WP_000943945.1;Name=WP_000943945.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=CCO57_RS00315;product=glutathionylspermidine synthase family protein;protein_id=WP_000943945.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 56705 58327 . + . ID=gene-CCO57_RS00320;Name=CCO57_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00320;old_locus_tag=CCO57_00320 NZ_NPMC01000001.1 Protein Homology CDS 56705 58327 . + 0 ID=cds-WP_001525299.1;Parent=gene-CCO57_RS00320;Dbxref=GenBank:WP_001525299.1;Name=WP_001525299.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=CCO57_RS00320;product=isovaleryl-CoA dehydrogenase;protein_id=WP_001525299.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 58372 58647 . - . ID=gene-CCO57_RS00325;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=CCO57_RS00325;old_locus_tag=CCO57_00325 NZ_NPMC01000001.1 Protein Homology CDS 58372 58647 . - 0 ID=cds-WP_001518964.1;Parent=gene-CCO57_RS00325;Dbxref=GenBank:WP_001518964.1;Name=WP_001518964.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=CCO57_RS00325;product=DUF1471 family protease activator YjfN;protein_id=WP_001518964.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 58778 59107 . - . ID=gene-CCO57_RS00330;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=CCO57_RS00330;old_locus_tag=CCO57_00330 NZ_NPMC01000001.1 Protein Homology CDS 58778 59107 . - 0 ID=cds-WP_000586836.1;Parent=gene-CCO57_RS00330;Dbxref=GenBank:WP_000586836.1;Name=WP_000586836.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=CCO57_RS00330;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586836.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 59291 60040 . + . ID=gene-CCO57_RS00335;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=CCO57_RS00335;old_locus_tag=CCO57_00335 NZ_NPMC01000001.1 Protein Homology CDS 59291 60040 . + 0 ID=cds-WP_000560309.1;Parent=gene-CCO57_RS00335;Dbxref=GenBank:WP_000560309.1;Name=WP_000560309.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=CCO57_RS00335;product=esterase;protein_id=WP_000560309.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 60037 60792 . - . ID=gene-CCO57_RS00340;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=CCO57_RS00340;old_locus_tag=CCO57_00340 NZ_NPMC01000001.1 Protein Homology CDS 60037 60792 . - 0 ID=cds-WP_000133618.1;Parent=gene-CCO57_RS00340;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=CCO57_RS00340;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 60897 61961 . - . ID=gene-CCO57_RS00345;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CCO57_RS00345;old_locus_tag=CCO57_00345 NZ_NPMC01000001.1 Protein Homology CDS 60897 61961 . - 0 ID=cds-WP_000049161.1;Parent=gene-CCO57_RS00345;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=CCO57_RS00345;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 62324 63721 . + . ID=gene-CCO57_RS00350;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=CCO57_RS00350;old_locus_tag=CCO57_00350 NZ_NPMC01000001.1 Protein Homology CDS 62324 63721 . + 0 ID=cds-WP_000404876.1;Parent=gene-CCO57_RS00350;Dbxref=GenBank:WP_000404876.1;Name=WP_000404876.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=CCO57_RS00350;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404876.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 63737 64042 . + . ID=gene-CCO57_RS00355;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=CCO57_RS00355;old_locus_tag=CCO57_00355 NZ_NPMC01000001.1 Protein Homology CDS 63737 64042 . + 0 ID=cds-WP_000218358.1;Parent=gene-CCO57_RS00355;Dbxref=GenBank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=CCO57_RS00355;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 64052 64516 . + . ID=gene-CCO57_RS00360;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=CCO57_RS00360;old_locus_tag=CCO57_00360 NZ_NPMC01000001.1 Protein Homology CDS 64052 64516 . + 0 ID=cds-WP_000776531.1;Parent=gene-CCO57_RS00360;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=CCO57_RS00360;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 64530 65180 . + . ID=gene-CCO57_RS00365;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO57_RS00365;old_locus_tag=CCO57_00365 NZ_NPMC01000001.1 Protein Homology CDS 64530 65180 . + 0 ID=cds-WP_023216462.1;Parent=gene-CCO57_RS00365;Dbxref=GenBank:WP_023216462.1;Name=WP_023216462.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=CCO57_RS00365;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_023216462.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 65190 66044 . + . ID=gene-CCO57_RS00370;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=CCO57_RS00370;old_locus_tag=CCO57_00370 NZ_NPMC01000001.1 Protein Homology CDS 65190 66044 . + 0 ID=cds-WP_094914756.1;Parent=gene-CCO57_RS00370;Dbxref=GenBank:WP_094914756.1;Name=WP_094914756.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=CCO57_RS00370;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_094914756.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 66044 66730 . + . ID=gene-CCO57_RS00375;Name=CCO57_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00375;old_locus_tag=CCO57_00375 NZ_NPMC01000001.1 Protein Homology CDS 66044 66730 . + 0 ID=cds-WP_001170769.1;Parent=gene-CCO57_RS00375;Dbxref=GenBank:WP_001170769.1;Name=WP_001170769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=CCO57_RS00375;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170769.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 66818 67375 . + . ID=gene-CCO57_RS00380;Name=CCO57_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00380;old_locus_tag=CCO57_00380 NZ_NPMC01000001.1 Protein Homology CDS 66818 67375 . + 0 ID=cds-WP_000026294.1;Parent=gene-CCO57_RS00380;Dbxref=GenBank:WP_000026294.1;Name=WP_000026294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=CCO57_RS00380;product=YagU family protein;protein_id=WP_000026294.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 67428 67703 . - . ID=gene-CCO57_RS00385;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=CCO57_RS00385;old_locus_tag=CCO57_00385 NZ_NPMC01000001.1 Protein Homology CDS 67428 67703 . - 0 ID=cds-WP_094914757.1;Parent=gene-CCO57_RS00385;Dbxref=GenBank:WP_094914757.1;Name=WP_094914757.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=CCO57_RS00385;product=DUF1471 family protein YjfY;protein_id=WP_094914757.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 68090 68485 . + . ID=gene-CCO57_RS00395;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CCO57_RS00395;old_locus_tag=CCO57_00395 NZ_NPMC01000001.1 Protein Homology CDS 68090 68485 . + 0 ID=cds-WP_001216673.1;Parent=gene-CCO57_RS00395;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=CCO57_RS00395;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 68492 68806 . + . ID=gene-CCO57_RS00400;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=CCO57_RS00400;old_locus_tag=CCO57_00400 NZ_NPMC01000001.1 Protein Homology CDS 68492 68806 . + 0 ID=cds-WP_001519453.1;Parent=gene-CCO57_RS00400;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=CCO57_RS00400;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 68811 69038 . + . ID=gene-CCO57_RS00405;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CCO57_RS00405;old_locus_tag=CCO57_00405 NZ_NPMC01000001.1 Protein Homology CDS 68811 69038 . + 0 ID=cds-WP_000135199.1;Parent=gene-CCO57_RS00405;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=CCO57_RS00405;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 69080 69529 . + . ID=gene-CCO57_RS00410;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CCO57_RS00410;old_locus_tag=CCO57_00410 NZ_NPMC01000001.1 Protein Homology CDS 69080 69529 . + 0 ID=cds-WP_001196065.1;Parent=gene-CCO57_RS00410;Dbxref=GenBank:WP_001196065.1;Name=WP_001196065.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=CCO57_RS00410;product=50S ribosomal protein L9;protein_id=WP_001196065.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 69677 70603 . + . ID=gene-CCO57_RS00415;Name=CCO57_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00415;old_locus_tag=CCO57_00415 NZ_NPMC01000001.1 Protein Homology CDS 69677 70603 . + 0 ID=cds-WP_000381076.1;Parent=gene-CCO57_RS00415;Dbxref=GenBank:WP_000381076.1;Name=WP_000381076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=CCO57_RS00415;product=DMT family transporter;protein_id=WP_000381076.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 70653 71288 . - . ID=gene-CCO57_RS00420;Name=CCO57_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00420;old_locus_tag=CCO57_00420 NZ_NPMC01000001.1 Protein Homology CDS 70653 71288 . - 0 ID=cds-WP_001119448.1;Parent=gene-CCO57_RS00420;Dbxref=GenBank:WP_001119448.1;Name=WP_001119448.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=CCO57_RS00420;product=OapA family protein;protein_id=WP_001119448.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 71508 72128 . + . ID=gene-CCO57_RS00425;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=CCO57_RS00425;old_locus_tag=CCO57_00425 NZ_NPMC01000001.1 Protein Homology CDS 71508 72128 . + 0 ID=cds-WP_000235161.1;Parent=gene-CCO57_RS00425;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=CCO57_RS00425;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 72424 73833 . + . ID=gene-CCO57_RS00430;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=CCO57_RS00430;old_locus_tag=CCO57_00430 NZ_NPMC01000001.1 Protein Homology CDS 72424 73833 . + 0 ID=cds-WP_000228323.1;Parent=gene-CCO57_RS00430;Dbxref=GenBank:WP_000228323.1;Name=WP_000228323.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=CCO57_RS00430;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228323.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 73945 74607 . - . ID=gene-CCO57_RS00435;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=CCO57_RS00435;old_locus_tag=CCO57_00435 NZ_NPMC01000001.1 Protein Homology CDS 73945 74607 . - 0 ID=cds-WP_000331467.1;Parent=gene-CCO57_RS00435;Dbxref=GenBank:WP_000331467.1;Name=WP_000331467.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=CCO57_RS00435;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331467.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 74710 75675 . - . ID=gene-CCO57_RS00440;Name=CCO57_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00440;old_locus_tag=CCO57_00440 NZ_NPMC01000001.1 Protein Homology CDS 74710 75675 . - 0 ID=cds-WP_000623290.1;Parent=gene-CCO57_RS00440;Dbxref=GenBank:WP_000623290.1;Name=WP_000623290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=CCO57_RS00440;product=DMT family transporter;protein_id=WP_000623290.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 75756 76604 . - . ID=gene-CCO57_RS00445;Name=CCO57_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00445;old_locus_tag=CCO57_00445 NZ_NPMC01000001.1 Protein Homology CDS 75756 76604 . - 0 ID=cds-WP_076727933.1;Parent=gene-CCO57_RS00445;Dbxref=GenBank:WP_076727933.1;Name=WP_076727933.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=CCO57_RS00445;product=SDR family oxidoreductase;protein_id=WP_076727933.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 76692 77078 . + . ID=gene-CCO57_RS00450;Name=CCO57_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00450;old_locus_tag=CCO57_00450 NZ_NPMC01000001.1 Protein Homology CDS 76692 77078 . + 0 ID=cds-WP_076727937.1;Parent=gene-CCO57_RS00450;Dbxref=GenBank:WP_076727937.1;Name=WP_076727937.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=CCO57_RS00450;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_076727937.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 77136 79079 . - . ID=gene-CCO57_RS00455;Name=CCO57_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00455;old_locus_tag=CCO57_00455 NZ_NPMC01000001.1 Protein Homology CDS 77136 79079 . - 0 ID=cds-WP_094914758.1;Parent=gene-CCO57_RS00455;Dbxref=GenBank:WP_094914758.1;Name=WP_094914758.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=CCO57_RS00455;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_094914758.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 79347 80087 . + . ID=gene-CCO57_RS00465;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=CCO57_RS00465;old_locus_tag=CCO57_00465 NZ_NPMC01000001.1 Protein Homology CDS 79347 80087 . + 0 ID=cds-WP_000893398.1;Parent=gene-CCO57_RS00465;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=CCO57_RS00465;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 80077 80634 . - . ID=gene-CCO57_RS00470;Name=CCO57_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00470;old_locus_tag=CCO57_00470 NZ_NPMC01000001.1 Protein Homology CDS 80077 80634 . - 0 ID=cds-WP_000175303.1;Parent=gene-CCO57_RS00470;Dbxref=GenBank:WP_000175303.1;Name=WP_000175303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=CCO57_RS00470;product=YtfJ family protein;protein_id=WP_000175303.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 80961 81167 . + . ID=gene-CCO57_RS00480;Name=CCO57_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00480;old_locus_tag=CCO57_00480 NZ_NPMC01000001.1 Protein Homology CDS 80961 81167 . + 0 ID=cds-WP_000689229.1;Parent=gene-CCO57_RS00480;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=CCO57_RS00480;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 81252 82595 . - . ID=gene-CCO57_RS00485;Name=CCO57_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00485;old_locus_tag=CCO57_00485 NZ_NPMC01000001.1 Protein Homology CDS 81252 82595 . - 0 ID=cds-WP_000934970.1;Parent=gene-CCO57_RS00485;Dbxref=GenBank:WP_000934970.1;Name=WP_000934970.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=CCO57_RS00485;product=hemolysin family protein;protein_id=WP_000934970.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 82778 83416 . - . ID=gene-CCO57_RS00490;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CCO57_RS00490;old_locus_tag=CCO57_00490 NZ_NPMC01000001.1 Protein Homology CDS 82778 83416 . - 0 ID=cds-WP_000051464.1;Parent=gene-CCO57_RS00490;Dbxref=GenBank:WP_000051464.1;Name=WP_000051464.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=CCO57_RS00490;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051464.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 83629 85362 . + . ID=gene-CCO57_RS00495;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=CCO57_RS00495;old_locus_tag=CCO57_00495 NZ_NPMC01000001.1 Protein Homology CDS 83629 85362 . + 0 ID=cds-WP_001120237.1;Parent=gene-CCO57_RS00495;Dbxref=GenBank:WP_001120237.1;Name=WP_001120237.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=CCO57_RS00495;product=autotransporter assembly complex protein TamA;protein_id=WP_001120237.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 85359 89138 . + . ID=gene-CCO57_RS00500;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=CCO57_RS00500;old_locus_tag=CCO57_00500 NZ_NPMC01000001.1 Protein Homology CDS 85359 89138 . + 0 ID=cds-WP_094914760.1;Parent=gene-CCO57_RS00500;Dbxref=GenBank:WP_094914760.1;Name=WP_094914760.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=CCO57_RS00500;product=autotransporter assembly complex protein TamB;protein_id=WP_094914760.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 89141 89485 . + . ID=gene-CCO57_RS00505;Name=CCO57_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00505;old_locus_tag=CCO57_00505 NZ_NPMC01000001.1 Protein Homology CDS 89141 89485 . + 0 ID=cds-WP_001219167.1;Parent=gene-CCO57_RS00505;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=CCO57_RS00505;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 89539 90747 . - . ID=gene-CCO57_RS00510;Name=CCO57_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00510;old_locus_tag=CCO57_00510 NZ_NPMC01000001.1 Protein Homology CDS 89539 90747 . - 0 ID=cds-WP_000203131.1;Parent=gene-CCO57_RS00510;Dbxref=GenBank:WP_000203131.1;Name=WP_000203131.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=CCO57_RS00510;product=MFS transporter;protein_id=WP_000203131.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 90744 91907 . - . ID=gene-CCO57_RS00515;Name=CCO57_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00515;old_locus_tag=CCO57_00515 NZ_NPMC01000001.1 Protein Homology CDS 90744 91907 . - 0 ID=cds-WP_023212817.1;Parent=gene-CCO57_RS00515;Dbxref=GenBank:WP_023212817.1;Name=WP_023212817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=CCO57_RS00515;product=metallo-dependent hydrolase;protein_id=WP_023212817.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 92317 92847 . - . ID=gene-CCO57_RS00520;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=CCO57_RS00520;old_locus_tag=CCO57_00520 NZ_NPMC01000001.1 Protein Homology CDS 92317 92847 . - 0 ID=cds-WP_000055079.1;Parent=gene-CCO57_RS00520;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=CCO57_RS00520;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 93074 94072 . - . ID=gene-CCO57_RS00525;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=CCO57_RS00525;old_locus_tag=CCO57_00525 NZ_NPMC01000001.1 Protein Homology CDS 93074 94072 . - 0 ID=cds-WP_000853764.1;Parent=gene-CCO57_RS00525;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=CCO57_RS00525;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 94247 95626 . + . ID=gene-CCO57_RS00530;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=CCO57_RS00530;old_locus_tag=CCO57_00530 NZ_NPMC01000001.1 Protein Homology CDS 94247 95626 . + 0 ID=cds-WP_001219833.1;Parent=gene-CCO57_RS00530;Dbxref=GenBank:WP_001219833.1;Name=WP_001219833.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463277.1;locus_tag=CCO57_RS00530;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219833.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 96118 96951 . + . ID=gene-CCO57_RS00540;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=CCO57_RS00540;old_locus_tag=CCO57_00540 NZ_NPMC01000001.1 Protein Homology CDS 96118 96951 . + 0 ID=cds-WP_000033840.1;Parent=gene-CCO57_RS00540;Dbxref=GenBank:WP_000033840.1;Name=WP_000033840.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=CCO57_RS00540;product=myo-inositol utilization transcriptional regulator IolR;protein_id=WP_000033840.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 97003 98436 . - . ID=gene-CCO57_RS00545;Name=iolT1;gbkey=Gene;gene=iolT1;gene_biotype=protein_coding;locus_tag=CCO57_RS00545;old_locus_tag=CCO57_00545 NZ_NPMC01000001.1 Protein Homology CDS 97003 98436 . - 0 ID=cds-WP_000107709.1;Parent=gene-CCO57_RS00545;Dbxref=GenBank:WP_000107709.1;Name=WP_000107709.1;gbkey=CDS;gene=iolT1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=CCO57_RS00545;product=myo-inositol import MFS transporter IolT1;protein_id=WP_000107709.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 98664 98858 . - . ID=gene-CCO57_RS00550;Name=CCO57_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00550;old_locus_tag=CCO57_00550 NZ_NPMC01000001.1 GeneMarkS-2+ CDS 98664 98858 . - 0 ID=cds-WP_088524176.1;Parent=gene-CCO57_RS00550;Dbxref=GenBank:WP_088524176.1;Name=WP_088524176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS00550;product=hypothetical protein;protein_id=WP_088524176.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 98895 100331 . + . ID=gene-CCO57_RS00555;Name=iolT2;gbkey=Gene;gene=iolT2;gene_biotype=protein_coding;locus_tag=CCO57_RS00555;old_locus_tag=CCO57_00555 NZ_NPMC01000001.1 Protein Homology CDS 98895 100331 . + 0 ID=cds-WP_088524177.1;Parent=gene-CCO57_RS00555;Dbxref=GenBank:WP_088524177.1;Name=WP_088524177.1;gbkey=CDS;gene=iolT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=CCO57_RS00555;product=myo-inositol import MFS transporter IolT2;protein_id=WP_088524177.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 100684 101493 . - . ID=gene-CCO57_RS00560;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=CCO57_RS00560;old_locus_tag=CCO57_00560 NZ_NPMC01000001.1 Protein Homology CDS 100684 101493 . - 0 ID=cds-WP_000002010.1;Parent=gene-CCO57_RS00560;Dbxref=GenBank:WP_000002010.1;Name=WP_000002010.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=CCO57_RS00560;product=5-deoxy-glucuronate isomerase;protein_id=WP_000002010.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 101518 103023 . - . ID=gene-CCO57_RS00565;Name=iolA;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=CCO57_RS00565;old_locus_tag=CCO57_00565 NZ_NPMC01000001.1 Protein Homology CDS 101518 103023 . - 0 ID=cds-WP_000450729.1;Parent=gene-CCO57_RS00565;Dbxref=GenBank:WP_000450729.1;Name=WP_000450729.1;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=CCO57_RS00565;product=malonate-semialdehyde dehydrogenase IolA;protein_id=WP_000450729.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 103039 103341 . - . ID=gene-CCO57_RS00570;Name=CCO57_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00570;old_locus_tag=CCO57_00570 NZ_NPMC01000001.1 Protein Homology CDS 103039 103341 . - 0 ID=cds-WP_094914761.1;Parent=gene-CCO57_RS00570;Dbxref=GenBank:WP_094914761.1;Name=WP_094914761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=CCO57_RS00570;product=hypothetical protein;protein_id=WP_094914761.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 103464 104288 . + . ID=gene-CCO57_RS00575;Name=reiD;gbkey=Gene;gene=reiD;gene_biotype=protein_coding;locus_tag=CCO57_RS00575;old_locus_tag=CCO57_00575 NZ_NPMC01000001.1 Protein Homology CDS 103464 104288 . + 0 ID=cds-WP_000332219.1;Parent=gene-CCO57_RS00575;Dbxref=GenBank:WP_000332219.1;Name=WP_000332219.1;gbkey=CDS;gene=reiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332219.1;locus_tag=CCO57_RS00575;product=myo-inositol utilization transcriptional regulator ReiD;protein_id=WP_000332219.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 104548 105468 . + . ID=gene-CCO57_RS00580;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=CCO57_RS00580;old_locus_tag=CCO57_00580 NZ_NPMC01000001.1 Protein Homology CDS 104548 105468 . + 0 ID=cds-WP_012601329.1;Parent=gene-CCO57_RS00580;Dbxref=GenBank:WP_012601329.1;Name=WP_012601329.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=CCO57_RS00580;product=myo-inosose-2 dehydratase;protein_id=WP_012601329.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 105487 106497 . + . ID=gene-CCO57_RS00585;Name=iolG1;gbkey=Gene;gene=iolG1;gene_biotype=protein_coding;locus_tag=CCO57_RS00585;old_locus_tag=CCO57_00585 NZ_NPMC01000001.1 Protein Homology CDS 105487 106497 . + 0 ID=cds-WP_000172704.1;Parent=gene-CCO57_RS00585;Dbxref=GenBank:WP_000172704.1;Name=WP_000172704.1;gbkey=CDS;gene=iolG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=CCO57_RS00585;product=inositol 2-dehydrogenase IolG1;protein_id=WP_000172704.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 106595 107938 . + . ID=gene-CCO57_RS00590;Name=srfJ;gbkey=Gene;gene=srfJ;gene_biotype=protein_coding;locus_tag=CCO57_RS00590;old_locus_tag=CCO57_00590 NZ_NPMC01000001.1 Protein Homology CDS 106595 107938 . + 0 ID=cds-WP_000678388.1;Parent=gene-CCO57_RS00590;Dbxref=GenBank:WP_000678388.1;Name=WP_000678388.1;gbkey=CDS;gene=srfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=CCO57_RS00590;product=lysosomal glucosyl ceramidase-like type III secretion effector SrfJ;protein_id=WP_000678388.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 107939 108772 . + . ID=gene-CCO57_RS00595;Name=iolI1;gbkey=Gene;gene=iolI1;gene_biotype=protein_coding;locus_tag=CCO57_RS00595;old_locus_tag=CCO57_00595 NZ_NPMC01000001.1 Protein Homology CDS 107939 108772 . + 0 ID=cds-WP_000976927.1;Parent=gene-CCO57_RS00595;Dbxref=GenBank:WP_000976927.1;Name=WP_000976927.1;gbkey=CDS;gene=iolI1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=CCO57_RS00595;product=2-keto-myo-inositol isomerase IolI1;protein_id=WP_000976927.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 108769 109935 . - . ID=gene-CCO57_RS00600;Name=CCO57_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00600;old_locus_tag=CCO57_00600 NZ_NPMC01000001.1 Protein Homology CDS 108769 109935 . - 0 ID=cds-WP_023233265.1;Parent=gene-CCO57_RS00600;Dbxref=GenBank:WP_023233265.1;Name=WP_023233265.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=CCO57_RS00600;product=MFS transporter;protein_id=WP_023233265.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 109996 111933 . - . ID=gene-CCO57_RS00605;Name=CCO57_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00605;old_locus_tag=CCO57_00605 NZ_NPMC01000001.1 Protein Homology CDS 109996 111933 . - 0 ID=cds-WP_014343940.1;Parent=gene-CCO57_RS00605;Dbxref=GenBank:WP_014343940.1;Name=WP_014343940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=CCO57_RS00605;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_014343940.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 112350 114290 . + . ID=gene-CCO57_RS00610;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=CCO57_RS00610;old_locus_tag=CCO57_00610 NZ_NPMC01000001.1 Protein Homology CDS 112350 114290 . + 0 ID=cds-WP_000849477.1;Parent=gene-CCO57_RS00610;Dbxref=GenBank:WP_000849477.1;Name=WP_000849477.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=CCO57_RS00610;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_000849477.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 114471 115493 . + . ID=gene-CCO57_RS00615;Name=iolG2;gbkey=Gene;gene=iolG2;gene_biotype=protein_coding;locus_tag=CCO57_RS00615;old_locus_tag=CCO57_00615 NZ_NPMC01000001.1 Protein Homology CDS 114471 115493 . + 0 ID=cds-WP_000736098.1;Parent=gene-CCO57_RS00615;Dbxref=GenBank:WP_000736098.1;Name=WP_000736098.1;gbkey=CDS;gene=iolG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=CCO57_RS00615;product=D-chiro-inositol-2-dehydrogenase IolG2;protein_id=WP_000736098.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 115566 116792 . + . ID=gene-CCO57_RS00620;Name=CCO57_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00620;old_locus_tag=CCO57_00620 NZ_NPMC01000001.1 Protein Homology CDS 115566 116792 . + 0 ID=cds-WP_023233267.1;Parent=gene-CCO57_RS00620;Dbxref=GenBank:WP_023233267.1;Name=WP_023233267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=CCO57_RS00620;product=MFS transporter;protein_id=WP_023233267.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 116953 117768 . + . ID=gene-CCO57_RS00625;Name=iolI2;gbkey=Gene;gene=iolI2;gene_biotype=protein_coding;locus_tag=CCO57_RS00625;old_locus_tag=CCO57_00625 NZ_NPMC01000001.1 Protein Homology CDS 116953 117768 . + 0 ID=cds-WP_001019386.1;Parent=gene-CCO57_RS00625;Dbxref=GenBank:WP_001019386.1;Name=WP_001019386.1;gbkey=CDS;gene=iolI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=CCO57_RS00625;product=2-keto-myo-inositol isomerase IolI2;protein_id=WP_001019386.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 117821 118705 . + . ID=gene-CCO57_RS00630;Name=iolH;gbkey=Gene;gene=iolH;gene_biotype=protein_coding;locus_tag=CCO57_RS00630;old_locus_tag=CCO57_00630 NZ_NPMC01000001.1 Protein Homology CDS 117821 118705 . + 0 ID=cds-WP_000683955.1;Parent=gene-CCO57_RS00630;Dbxref=GenBank:WP_000683955.1;Name=WP_000683955.1;gbkey=CDS;gene=iolH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=CCO57_RS00630;product=sugar phosphate isomerase/epimerase IolH;protein_id=WP_000683955.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 118761 119312 . - . ID=gene-CCO57_RS00635;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=CCO57_RS00635;old_locus_tag=CCO57_00635 NZ_NPMC01000001.1 Protein Homology CDS 118761 119312 . - 0 ID=cds-WP_000166287.1;Parent=gene-CCO57_RS00635;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=CCO57_RS00635;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 119408 120760 . + . ID=gene-CCO57_RS00640;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=CCO57_RS00640;old_locus_tag=CCO57_00640 NZ_NPMC01000001.1 Protein Homology CDS 119408 120760 . + 0 ID=cds-WP_000852997.1;Parent=gene-CCO57_RS00640;Dbxref=GenBank:WP_000852997.1;Name=WP_000852997.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=CCO57_RS00640;product=metalloprotease PmbA;protein_id=WP_000852997.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 120859 121245 . + . ID=gene-CCO57_RS00645;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=CCO57_RS00645;old_locus_tag=CCO57_00645 NZ_NPMC01000001.1 Protein Homology CDS 120859 121245 . + 0 ID=cds-WP_001232233.1;Parent=gene-CCO57_RS00645;Dbxref=GenBank:WP_001232233.1;Name=WP_001232233.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=CCO57_RS00645;product=cytochrome b562;protein_id=WP_001232233.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 121523 121861 . + . ID=gene-CCO57_RS00650;Name=CCO57_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00650;old_locus_tag=CCO57_00650 NZ_NPMC01000001.1 Protein Homology CDS 121523 121861 . + 0 ID=cds-WP_001255102.1;Parent=gene-CCO57_RS00650;Dbxref=GenBank:WP_001255102.1;Name=WP_001255102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=CCO57_RS00650;product=glycine dehydrogenase;protein_id=WP_001255102.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 121872 122234 . + . ID=gene-CCO57_RS00655;Name=CCO57_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00655;old_locus_tag=CCO57_00655 NZ_NPMC01000001.1 Protein Homology CDS 121872 122234 . + 0 ID=cds-WP_000435389.1;Parent=gene-CCO57_RS00655;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=CCO57_RS00655;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 122234 122536 . + . ID=gene-CCO57_RS00660;Name=CCO57_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00660;old_locus_tag=CCO57_00660 NZ_NPMC01000001.1 Protein Homology CDS 122234 122536 . + 0 ID=cds-WP_000975187.1;Parent=gene-CCO57_RS00660;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=CCO57_RS00660;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 122559 123335 . + . ID=gene-CCO57_RS00665;Name=CCO57_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00665;old_locus_tag=CCO57_00665 NZ_NPMC01000001.1 Protein Homology CDS 122559 123335 . + 0 ID=cds-WP_000478578.1;Parent=gene-CCO57_RS00665;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=CCO57_RS00665;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 123347 123991 . + . ID=gene-CCO57_RS00670;Name=CCO57_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00670;old_locus_tag=CCO57_00670 NZ_NPMC01000001.1 Protein Homology CDS 123347 123991 . + 0 ID=cds-WP_000392127.1;Parent=gene-CCO57_RS00670;Dbxref=GenBank:WP_000392127.1;Name=WP_000392127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=CCO57_RS00670;product=DUF4310 family protein;protein_id=WP_000392127.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 124050 125183 . + . ID=gene-CCO57_RS00675;Name=CCO57_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00675;old_locus_tag=CCO57_00675 NZ_NPMC01000001.1 Protein Homology CDS 124050 125183 . + 0 ID=cds-WP_000459941.1;Parent=gene-CCO57_RS00675;Dbxref=GenBank:WP_000459941.1;Name=WP_000459941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=CCO57_RS00675;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_000459941.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 125167 126285 . + . ID=gene-CCO57_RS00680;Name=CCO57_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00680;old_locus_tag=CCO57_00680 NZ_NPMC01000001.1 Protein Homology CDS 125167 126285 . + 0 ID=cds-WP_001139165.1;Parent=gene-CCO57_RS00680;Dbxref=GenBank:WP_001139165.1;Name=WP_001139165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=CCO57_RS00680;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_001139165.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 126282 127022 . + . ID=gene-CCO57_RS00685;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO57_RS00685;old_locus_tag=CCO57_00685 NZ_NPMC01000001.1 Protein Homology CDS 126282 127022 . + 0 ID=cds-WP_000779262.1;Parent=gene-CCO57_RS00685;Dbxref=GenBank:WP_000779262.1;Name=WP_000779262.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=CCO57_RS00685;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000779262.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 127039 128952 . + . ID=gene-CCO57_RS00690;Name=CCO57_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00690;old_locus_tag=CCO57_00690 NZ_NPMC01000001.1 Protein Homology CDS 127039 128952 . + 0 ID=cds-WP_023233269.1;Parent=gene-CCO57_RS00690;Dbxref=GenBank:WP_023233269.1;Name=WP_023233269.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=CCO57_RS00690;product=BglG family transcription antiterminator;protein_id=WP_023233269.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 129030 129272 . + . ID=gene-CCO57_RS00695;Name=CCO57_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00695;old_locus_tag=CCO57_00695 NZ_NPMC01000001.1 Protein Homology CDS 129030 129272 . + 0 ID=cds-WP_001631979.1;Parent=gene-CCO57_RS00695;Dbxref=GenBank:WP_001631979.1;Name=WP_001631979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=CCO57_RS00695;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_001631979.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 129262 129546 . + . ID=gene-CCO57_RS00700;Name=CCO57_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00700;old_locus_tag=CCO57_00700 NZ_NPMC01000001.1 Protein Homology CDS 129262 129546 . + 0 ID=cds-WP_001631980.1;Parent=gene-CCO57_RS00700;Dbxref=GenBank:WP_001631980.1;Name=WP_001631980.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=CCO57_RS00700;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_001631980.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 129550 130014 . - . ID=gene-CCO57_RS00705;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CCO57_RS00705;old_locus_tag=CCO57_00705 NZ_NPMC01000001.1 Protein Homology CDS 129550 130014 . - 0 ID=cds-WP_001009178.1;Parent=gene-CCO57_RS00705;Dbxref=GenBank:WP_001009178.1;Name=WP_001009178.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=CCO57_RS00705;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001009178.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 130231 132369 . - . ID=gene-CCO57_RS00710;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CCO57_RS00710;old_locus_tag=CCO57_00710 NZ_NPMC01000001.1 Protein Homology CDS 130231 132369 . - 0 ID=cds-WP_094914762.1;Parent=gene-CCO57_RS00710;Dbxref=GenBank:WP_094914762.1;Name=WP_094914762.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=CCO57_RS00710;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_094914762.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 132778 134430 . - . ID=gene-CCO57_RS00715;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CCO57_RS00715;old_locus_tag=CCO57_00715 NZ_NPMC01000001.1 Protein Homology CDS 132778 134430 . - 0 ID=cds-WP_023197690.1;Parent=gene-CCO57_RS00715;Dbxref=GenBank:WP_023197690.1;Name=WP_023197690.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=CCO57_RS00715;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_023197690.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 134480 135898 . - . ID=gene-CCO57_RS00720;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=CCO57_RS00720;old_locus_tag=CCO57_00720 NZ_NPMC01000001.1 Protein Homology CDS 134480 135898 . - 0 ID=cds-WP_001631984.1;Parent=gene-CCO57_RS00720;Dbxref=GenBank:WP_001631984.1;Name=WP_001631984.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=CCO57_RS00720;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001631984.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 136036 136983 . - . ID=gene-CCO57_RS00725;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CCO57_RS00725;old_locus_tag=CCO57_00725 NZ_NPMC01000001.1 Protein Homology CDS 136036 136983 . - 0 ID=cds-WP_001181297.1;Parent=gene-CCO57_RS00725;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=CCO57_RS00725;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 137180 137233 . + . ID=gene-CCO57_RS24875;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=CCO57_RS24875 NZ_NPMC01000001.1 Protein Homology CDS 137180 137233 . + 0 ID=cds-WP_099374030.1;Parent=gene-CCO57_RS24875;Dbxref=GenBank:WP_099374030.1;Name=WP_099374030.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=CCO57_RS24875;product=mgtA regulatory leader peptide MgtL;protein_id=WP_099374030.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 137374 140082 . + . ID=gene-CCO57_RS00730;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO57_RS00730;old_locus_tag=CCO57_00730 NZ_NPMC01000001.1 Protein Homology CDS 137374 140082 . + 0 ID=cds-WP_023197691.1;Parent=gene-CCO57_RS00730;Dbxref=GenBank:WP_023197691.1;Name=WP_023197691.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=CCO57_RS00730;product=magnesium-translocating P-type ATPase;protein_id=WP_023197691.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 140171 140557 . - . ID=gene-CCO57_RS00735;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=CCO57_RS00735;old_locus_tag=CCO57_00735 NZ_NPMC01000001.1 Protein Homology CDS 140171 140557 . - 0 ID=cds-WP_000047544.1;Parent=gene-CCO57_RS00735;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=CCO57_RS00735;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 140634 141095 . - . ID=gene-CCO57_RS00740;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=CCO57_RS00740;old_locus_tag=CCO57_00740 NZ_NPMC01000001.1 Protein Homology CDS 140634 141095 . - 0 ID=cds-WP_000148566.1;Parent=gene-CCO57_RS00740;Dbxref=GenBank:WP_000148566.1;Name=WP_000148566.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=CCO57_RS00740;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148566.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 141108 142043 . - . ID=gene-CCO57_RS00745;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=CCO57_RS00745;old_locus_tag=CCO57_00745 NZ_NPMC01000001.1 Protein Homology CDS 141108 142043 . - 0 ID=cds-WP_000013055.1;Parent=gene-CCO57_RS00745;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=CCO57_RS00745;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 142079 142180 . - . ID=gene-CCO57_RS00750;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=CCO57_RS00750;old_locus_tag=CCO57_00750 NZ_NPMC01000001.1 Protein Homology CDS 142079 142180 . - 0 ID=cds-WP_000249504.1;Parent=gene-CCO57_RS00750;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=CCO57_RS00750;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 142160 142300 . + . ID=gene-CCO57_RS00755;Name=CCO57_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00755;old_locus_tag=CCO57_00755 NZ_NPMC01000001.1 Protein Homology CDS 142160 142300 . + 0 ID=cds-WP_001518160.1;Parent=gene-CCO57_RS00755;Dbxref=GenBank:WP_001518160.1;Name=WP_001518160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=CCO57_RS00755;product=hypothetical protein;protein_id=WP_001518160.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 142270 142758 . - . ID=gene-CCO57_RS00760;Name=CCO57_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00760;old_locus_tag=CCO57_00760 NZ_NPMC01000001.1 Protein Homology CDS 142270 142758 . - 0 ID=cds-WP_000666051.1;Parent=gene-CCO57_RS00760;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=CCO57_RS00760;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 142945 144348 . - . ID=gene-CCO57_RS00765;Name=CCO57_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00765;old_locus_tag=CCO57_00765 NZ_NPMC01000001.1 Protein Homology CDS 142945 144348 . - 0 ID=cds-WP_000514438.1;Parent=gene-CCO57_RS00765;Dbxref=GenBank:WP_000514438.1;Name=WP_000514438.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=CCO57_RS00765;product=YfcC family protein;protein_id=WP_000514438.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 144404 145408 . - . ID=gene-CCO57_RS00770;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO57_RS00770;old_locus_tag=CCO57_00770 NZ_NPMC01000001.1 Protein Homology CDS 144404 145408 . - 0 ID=cds-WP_094914763.1;Parent=gene-CCO57_RS00770;Dbxref=GenBank:WP_094914763.1;Name=WP_094914763.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=CCO57_RS00770;product=ornithine carbamoyltransferase;protein_id=WP_094914763.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 145520 146452 . - . ID=gene-CCO57_RS00775;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CCO57_RS00775;old_locus_tag=CCO57_00775 NZ_NPMC01000001.1 Protein Homology CDS 145520 146452 . - 0 ID=cds-WP_094914764.1;Parent=gene-CCO57_RS00775;Dbxref=GenBank:WP_094914764.1;Name=WP_094914764.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=CCO57_RS00775;product=carbamate kinase;protein_id=WP_094914764.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 146463 147683 . - . ID=gene-CCO57_RS00780;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO57_RS00780;old_locus_tag=CCO57_00780 NZ_NPMC01000001.1 Protein Homology CDS 146463 147683 . - 0 ID=cds-WP_000410846.1;Parent=gene-CCO57_RS00780;Dbxref=GenBank:WP_000410846.1;Name=WP_000410846.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=CCO57_RS00780;product=arginine deiminase;protein_id=WP_000410846.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 148359 148811 . + . ID=gene-CCO57_RS00795;Name=CCO57_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00795;old_locus_tag=CCO57_00795 NZ_NPMC01000001.1 Protein Homology CDS 148359 148811 . + 0 ID=cds-WP_023207470.1;Parent=gene-CCO57_RS00795;Dbxref=GenBank:WP_023207470.1;Name=WP_023207470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=CCO57_RS00795;product=YhcH/YjgK/YiaL family protein;protein_id=WP_023207470.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 148884 149888 . - . ID=gene-CCO57_RS00800;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO57_RS00800;old_locus_tag=CCO57_00800 NZ_NPMC01000001.1 Protein Homology CDS 148884 149888 . - 0 ID=cds-WP_000103041.1;Parent=gene-CCO57_RS00800;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=CCO57_RS00800;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 149858 150037 . - . ID=gene-CCO57_RS24880;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=CCO57_RS24880 NZ_NPMC01000001.1 Protein Homology CDS 149858 150037 . - 0 ID=cds-WP_370791389.1;Parent=gene-CCO57_RS24880;Dbxref=GenBank:WP_370791389.1;Name=WP_370791389.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=CCO57_RS24880;product=putative translational regulatory protein ArgL;protein_id=WP_370791389.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 150054 150470 . + . ID=gene-CCO57_RS00805;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=CCO57_RS00805;old_locus_tag=CCO57_00805 NZ_NPMC01000001.1 Protein Homology CDS 150054 150470 . + 0 ID=cds-WP_000002940.1;Parent=gene-CCO57_RS00805;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=CCO57_RS00805;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 150482 151294 . + . ID=gene-CCO57_RS00810;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=CCO57_RS00810;old_locus_tag=CCO57_00810 NZ_NPMC01000001.1 Protein Homology CDS 150482 151294 . + 0 ID=cds-WP_000218452.1;Parent=gene-CCO57_RS00810;Dbxref=GenBank:WP_000218452.1;Name=WP_000218452.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=CCO57_RS00810;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218452.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 151528 152016 . - . ID=gene-CCO57_RS00815;Name=CCO57_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00815;old_locus_tag=CCO57_00815 NZ_NPMC01000001.1 Protein Homology CDS 151528 152016 . - 0 ID=cds-WP_000826193.1;Parent=gene-CCO57_RS00815;Dbxref=GenBank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=CCO57_RS00815;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 152123 152626 . - . ID=gene-CCO57_RS00820;Name=CCO57_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00820;old_locus_tag=CCO57_00820 NZ_NPMC01000001.1 Protein Homology CDS 152123 152626 . - 0 ID=cds-WP_024797435.1;Parent=gene-CCO57_RS00820;Dbxref=GenBank:WP_024797435.1;Name=WP_024797435.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=CCO57_RS00820;product=GNAT family N-acetyltransferase;protein_id=WP_024797435.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 152821 154008 . + . ID=gene-CCO57_RS00825;Name=CCO57_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00825;old_locus_tag=CCO57_00825 NZ_NPMC01000001.1 Protein Homology CDS 152821 154008 . + 0 ID=cds-WP_094914765.1;Parent=gene-CCO57_RS00825;Dbxref=GenBank:WP_094914765.1;Name=WP_094914765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=CCO57_RS00825;product=YjgN family protein;protein_id=WP_094914765.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 154150 157005 . - . ID=gene-CCO57_RS00830;Name=CCO57_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00830;old_locus_tag=CCO57_00830 NZ_NPMC01000001.1 Protein Homology CDS 154150 157005 . - 0 ID=cds-WP_000416331.1;Parent=gene-CCO57_RS00830;Dbxref=GenBank:WP_000416331.1;Name=WP_000416331.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=CCO57_RS00830;product=valine--tRNA ligase;protein_id=WP_000416331.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 157005 157448 . - . ID=gene-CCO57_RS00835;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=CCO57_RS00835;old_locus_tag=CCO57_00835 NZ_NPMC01000001.1 Protein Homology CDS 157005 157448 . - 0 ID=cds-WP_023251496.1;Parent=gene-CCO57_RS00835;Dbxref=GenBank:WP_023251496.1;Name=WP_023251496.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=CCO57_RS00835;product=DNA polymerase III subunit chi;protein_id=WP_023251496.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 157568 159079 . - . ID=gene-CCO57_RS00840;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=CCO57_RS00840;old_locus_tag=CCO57_00840 NZ_NPMC01000001.1 Protein Homology CDS 157568 159079 . - 0 ID=cds-WP_000397158.1;Parent=gene-CCO57_RS00840;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=CCO57_RS00840;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 159360 159410 . + . ID=gene-CCO57_RS24460;Name=CCO57_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24460 NZ_NPMC01000001.1 Protein Homology CDS 159360 159410 . + 0 ID=cds-WP_212724070.1;Parent=gene-CCO57_RS24460;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=CCO57_RS24460;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 159474 160574 . + . ID=gene-CCO57_RS00855;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=CCO57_RS00855;old_locus_tag=CCO57_00855 NZ_NPMC01000001.1 Protein Homology CDS 159474 160574 . + 0 ID=cds-WP_000584132.1;Parent=gene-CCO57_RS00855;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=CCO57_RS00855;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 160574 161656 . + . ID=gene-CCO57_RS00860;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=CCO57_RS00860;old_locus_tag=CCO57_00860 NZ_NPMC01000001.1 Protein Homology CDS 160574 161656 . + 0 ID=cds-WP_001182242.1;Parent=gene-CCO57_RS00860;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=CCO57_RS00860;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 161852 162850 . - . ID=gene-CCO57_RS00865;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=CCO57_RS00865;old_locus_tag=CCO57_00865 NZ_NPMC01000001.1 Protein Homology CDS 161852 162850 . - 0 ID=cds-WP_001244061.1;Parent=gene-CCO57_RS00865;Dbxref=GenBank:WP_001244061.1;Name=WP_001244061.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=CCO57_RS00865;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244061.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 162914 164233 . - . ID=gene-CCO57_RS00870;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=CCO57_RS00870;old_locus_tag=CCO57_00870 NZ_NPMC01000001.1 Protein Homology CDS 162914 164233 . - 0 ID=cds-WP_001128356.1;Parent=gene-CCO57_RS00870;Dbxref=GenBank:WP_001128356.1;Name=WP_001128356.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=CCO57_RS00870;product=gnt-II system L-idonate transporter;protein_id=WP_001128356.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 164295 165059 . - . ID=gene-CCO57_RS00875;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=CCO57_RS00875;old_locus_tag=CCO57_00875 NZ_NPMC01000001.1 Protein Homology CDS 164295 165059 . - 0 ID=cds-WP_000998688.1;Parent=gene-CCO57_RS00875;Dbxref=GenBank:WP_000998688.1;Name=WP_000998688.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=CCO57_RS00875;product=gluconate 5-dehydrogenase;protein_id=WP_000998688.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 165084 166115 . - . ID=gene-CCO57_RS00880;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=CCO57_RS00880;old_locus_tag=CCO57_00880 NZ_NPMC01000001.1 Protein Homology CDS 165084 166115 . - 0 ID=cds-WP_079826787.1;Parent=gene-CCO57_RS00880;Dbxref=GenBank:WP_079826787.1;Name=WP_079826787.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=CCO57_RS00880;product=L-idonate 5-dehydrogenase;protein_id=WP_079826787.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 166332 166862 . + . ID=gene-CCO57_RS00885;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=CCO57_RS00885;old_locus_tag=CCO57_00885 NZ_NPMC01000001.1 Protein Homology CDS 166332 166862 . + 0 ID=cds-WP_023213568.1;Parent=gene-CCO57_RS00885;Dbxref=GenBank:WP_023213568.1;Name=WP_023213568.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=CCO57_RS00885;product=gluconokinase;protein_id=WP_023213568.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 166890 167909 . - . ID=gene-CCO57_RS00890;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=CCO57_RS00890;old_locus_tag=CCO57_00890 NZ_NPMC01000001.1 Protein Homology CDS 166890 167909 . - 0 ID=cds-WP_080177076.1;Parent=gene-CCO57_RS00890;Dbxref=GenBank:WP_080177076.1;Name=WP_080177076.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=CCO57_RS00890;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_080177076.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 168132 168216 . + . ID=gene-CCO57_RS00895;Name=CCO57_RS00895;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS00895;old_locus_tag=CCO57_00895 NZ_NPMC01000001.1 tRNAscan-SE tRNA 168132 168216 . + . ID=rna-CCO57_RS00895;Parent=gene-CCO57_RS00895;anticodon=(pos:168166..168168);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS00895;product=tRNA-Leu NZ_NPMC01000001.1 tRNAscan-SE exon 168132 168216 . + . ID=exon-CCO57_RS00895-1;Parent=rna-CCO57_RS00895;anticodon=(pos:168166..168168);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS00895;product=tRNA-Leu NZ_NPMC01000001.1 RefSeq gene 168694 168918 . + . ID=gene-CCO57_RS00905;Name=CCO57_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00905;old_locus_tag=CCO57_00905 NZ_NPMC01000001.1 Protein Homology CDS 168694 168918 . + 0 ID=cds-WP_031233173.1;Parent=gene-CCO57_RS00905;Dbxref=GenBank:WP_031233173.1;Name=WP_031233173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155191.1;locus_tag=CCO57_RS00905;product=CopG family ribbon-helix-helix protein;protein_id=WP_031233173.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 169027 169266 . + . ID=gene-CCO57_RS00910;Name=CCO57_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00910;old_locus_tag=CCO57_00910 NZ_NPMC01000001.1 Protein Homology CDS 169027 169266 . + 0 ID=cds-WP_000016244.1;Parent=gene-CCO57_RS00910;Dbxref=GenBank:WP_000016244.1;Name=WP_000016244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=CCO57_RS00910;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_000016244.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 169269 169577 . + . ID=gene-CCO57_RS00915;Name=CCO57_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00915;old_locus_tag=CCO57_00915 NZ_NPMC01000001.1 Protein Homology CDS 169269 169577 . + 0 ID=cds-WP_001199743.1;Parent=gene-CCO57_RS00915;Dbxref=GenBank:WP_001199743.1;Name=WP_001199743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=CCO57_RS00915;product=CcdB family protein;protein_id=WP_001199743.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 169999 170300 . + . ID=gene-CCO57_RS24470;Name=CCO57_RS24470;end_range=170300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24470;partial=true;pseudo=true NZ_NPMC01000001.1 Protein Homology CDS 169999 170300 . + 0 ID=cds-CCO57_RS24470;Parent=gene-CCO57_RS24470;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=170300,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=CCO57_RS24470;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 170662 174177 . + . ID=gene-CCO57_RS00925;Name=CCO57_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00925;old_locus_tag=CCO57_00925 NZ_NPMC01000001.1 Protein Homology CDS 170662 174177 . + 0 ID=cds-WP_094914766.1;Parent=gene-CCO57_RS00925;Dbxref=GenBank:WP_094914766.1;Name=WP_094914766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=CCO57_RS00925;product=AAA domain-containing protein;protein_id=WP_094914766.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 174274 175263 . + . ID=gene-CCO57_RS00930;Name=CCO57_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00930;old_locus_tag=CCO57_00930 NZ_NPMC01000001.1 Protein Homology CDS 174274 175263 . + 0 ID=cds-WP_077906211.1;Parent=gene-CCO57_RS00930;Dbxref=GenBank:WP_077906211.1;Name=WP_077906211.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463349.1;locus_tag=CCO57_RS00930;product=restriction endonuclease;protein_id=WP_077906211.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 175324 176673 . - . ID=gene-CCO57_RS00935;Name=CCO57_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00935;old_locus_tag=CCO57_00935 NZ_NPMC01000001.1 Protein Homology CDS 175324 176673 . - 0 ID=cds-WP_094914767.1;Parent=gene-CCO57_RS00935;Dbxref=GenBank:WP_094914767.1;Name=WP_094914767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001759691.1;locus_tag=CCO57_RS00935;product=phospholipase D-like domain-containing protein;protein_id=WP_094914767.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 176796 178880 . - . ID=gene-CCO57_RS00940;Name=brxL;gbkey=Gene;gene=brxL;gene_biotype=protein_coding;locus_tag=CCO57_RS00940;old_locus_tag=CCO57_00940 NZ_NPMC01000001.1 Protein Homology CDS 176796 178880 . - 0 ID=cds-WP_094914768.1;Parent=gene-CCO57_RS00940;Dbxref=GenBank:WP_094914768.1;Name=WP_094914768.1;gbkey=CDS;gene=brxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463350.1;locus_tag=CCO57_RS00940;product=protease Lon-related BREX system protein BrxL;protein_id=WP_094914768.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 178891 181488 . - . ID=gene-CCO57_RS00945;Name=pglZ;gbkey=Gene;gene=pglZ;gene_biotype=protein_coding;locus_tag=CCO57_RS00945;old_locus_tag=CCO57_00945 NZ_NPMC01000001.1 Protein Homology CDS 178891 181488 . - 0 ID=cds-WP_094914796.1;Parent=gene-CCO57_RS00945;Dbxref=GenBank:WP_094914796.1;Name=WP_094914796.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pglZ;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463351.1;locus_tag=CCO57_RS00945;product=BREX-1 system phosphatase PglZ type A;protein_id=WP_094914796.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 181491 182312 . - . ID=gene-CCO57_RS00950;Name=CCO57_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00950;old_locus_tag=CCO57_00950 NZ_NPMC01000001.1 Protein Homology CDS 181491 182312 . - 0 ID=cds-WP_094914769.1;Parent=gene-CCO57_RS00950;Dbxref=GenBank:WP_094914769.1;Name=WP_094914769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463352.1;locus_tag=CCO57_RS00950;product=DUF4435 domain-containing protein;protein_id=WP_094914769.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 182290 183378 . - . ID=gene-CCO57_RS00955;Name=CCO57_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00955;old_locus_tag=CCO57_00955 NZ_NPMC01000001.1 Protein Homology CDS 182290 183378 . - 0 ID=cds-WP_094914770.1;Parent=gene-CCO57_RS00955;Dbxref=GenBank:WP_094914770.1;Name=WP_094914770.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463353.1;locus_tag=CCO57_RS00955;product=ATP-binding protein;protein_id=WP_094914770.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 183378 187052 . - . ID=gene-CCO57_RS00960;Name=pglX;gbkey=Gene;gene=pglX;gene_biotype=protein_coding;locus_tag=CCO57_RS00960;old_locus_tag=CCO57_00960 NZ_NPMC01000001.1 Protein Homology CDS 183378 187052 . - 0 ID=cds-WP_094914771.1;Parent=gene-CCO57_RS00960;Dbxref=GenBank:WP_094914771.1;Name=WP_094914771.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=pglX;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001095592.1;locus_tag=CCO57_RS00960;product=BREX-1 system adenine-specific DNA-methyltransferase PglX;protein_id=WP_094914771.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 187098 190739 . - . ID=gene-CCO57_RS00965;Name=brxC;gbkey=Gene;gene=brxC;gene_biotype=protein_coding;locus_tag=CCO57_RS00965;old_locus_tag=CCO57_00965 NZ_NPMC01000001.1 Protein Homology CDS 187098 190739 . - 0 ID=cds-WP_094914772.1;Parent=gene-CCO57_RS00965;Dbxref=GenBank:WP_094914772.1;Name=WP_094914772.1;gbkey=CDS;gene=brxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463355.1;locus_tag=CCO57_RS00965;product=BREX system P-loop protein BrxC;protein_id=WP_094914772.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 190751 191353 . - . ID=gene-CCO57_RS00970;Name=CCO57_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00970;old_locus_tag=CCO57_00970 NZ_NPMC01000001.1 Protein Homology CDS 190751 191353 . - 0 ID=cds-WP_000566905.1;Parent=gene-CCO57_RS00970;Dbxref=GenBank:WP_000566905.1;Name=WP_000566905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463356.1;locus_tag=CCO57_RS00970;product=DUF1788 domain-containing protein;protein_id=WP_000566905.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 191350 191952 . - . ID=gene-CCO57_RS00975;Name=CCO57_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00975;old_locus_tag=CCO57_00975 NZ_NPMC01000001.1 Protein Homology CDS 191350 191952 . - 0 ID=cds-WP_094914797.1;Parent=gene-CCO57_RS00975;Dbxref=GenBank:WP_094914797.1;Name=WP_094914797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463357.1;locus_tag=CCO57_RS00975;product=DUF1819 family protein;protein_id=WP_094914797.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 192145 192362 . - . ID=gene-CCO57_RS24475;Name=CCO57_RS24475;end_range=192362,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24475;old_locus_tag=CCO57_00980;partial=true;pseudo=true NZ_NPMC01000001.1 Protein Homology CDS 192145 192362 . - 0 ID=cds-CCO57_RS24475;Parent=gene-CCO57_RS24475;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=192362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933319.1;locus_tag=CCO57_RS24475;partial=true;product=cell filamentation protein Fic;pseudo=true;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 192778 193494 . - . ID=gene-CCO57_RS00985;Name=CCO57_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00985;old_locus_tag=CCO57_00985 NZ_NPMC01000001.1 Protein Homology CDS 192778 193494 . - 0 ID=cds-WP_000532939.1;Parent=gene-CCO57_RS00985;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=CCO57_RS00985;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 194054 195685 . - . ID=gene-CCO57_RS00995;Name=CCO57_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS00995;old_locus_tag=CCO57_00995 NZ_NPMC01000001.1 Protein Homology CDS 194054 195685 . - 0 ID=cds-WP_094914773.1;Parent=gene-CCO57_RS00995;Dbxref=GenBank:WP_094914773.1;Name=WP_094914773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=CCO57_RS00995;product=class I SAM-dependent methyltransferase;protein_id=WP_094914773.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 195690 195947 . - . ID=gene-CCO57_RS01000;Name=CCO57_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01000;old_locus_tag=CCO57_01000 NZ_NPMC01000001.1 Protein Homology CDS 195690 195947 . - 0 ID=cds-WP_001054380.1;Parent=gene-CCO57_RS01000;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=CCO57_RS01000;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 196435 197043 . + . ID=gene-CCO57_RS01010;Name=CCO57_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01010;old_locus_tag=CCO57_01010 NZ_NPMC01000001.1 Protein Homology CDS 196435 197043 . + 0 ID=cds-WP_000864858.1;Parent=gene-CCO57_RS01010;Dbxref=GenBank:WP_000864858.1;Name=WP_000864858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=CCO57_RS01010;product=DUF1062 domain-containing protein;protein_id=WP_000864858.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 197395 198306 . + . ID=gene-CCO57_RS01015;Name=CCO57_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01015;old_locus_tag=CCO57_01015 NZ_NPMC01000001.1 Protein Homology CDS 197395 198306 . + 0 ID=cds-WP_000556783.1;Parent=gene-CCO57_RS01015;Dbxref=GenBank:WP_000556783.1;Name=WP_000556783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=CCO57_RS01015;product=STM4504/CBY_0614 family protein;protein_id=WP_000556783.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 198512 198973 . + . ID=gene-CCO57_RS01020;Name=CCO57_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01020;old_locus_tag=CCO57_01020 NZ_NPMC01000001.1 Protein Homology CDS 198512 198973 . + 0 ID=cds-WP_094914774.1;Parent=gene-CCO57_RS01020;Dbxref=GenBank:WP_094914774.1;Name=WP_094914774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=CCO57_RS01020;product=DUF302 domain-containing protein;protein_id=WP_094914774.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 198970 199644 . - . ID=gene-CCO57_RS01025;Name=CCO57_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01025;old_locus_tag=CCO57_01025 NZ_NPMC01000001.1 Protein Homology CDS 198970 199644 . - 0 ID=cds-WP_024155009.1;Parent=gene-CCO57_RS01025;Dbxref=GenBank:WP_024155009.1;Name=WP_024155009.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=CCO57_RS01025;product=dienelactone hydrolase family protein;protein_id=WP_024155009.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 199994 200767 . + . ID=gene-CCO57_RS01035;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=CCO57_RS01035;old_locus_tag=CCO57_01035 NZ_NPMC01000001.1 Protein Homology CDS 199994 200767 . + 0 ID=cds-WP_000841654.1;Parent=gene-CCO57_RS01035;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=CCO57_RS01035;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 200768 201781 . - . ID=gene-CCO57_RS01040;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO57_RS01040;old_locus_tag=CCO57_01040 NZ_NPMC01000001.1 Protein Homology CDS 200768 201781 . - 0 ID=cds-WP_001094616.1;Parent=gene-CCO57_RS01040;Dbxref=GenBank:WP_001094616.1;Name=WP_001094616.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=CCO57_RS01040;product=tryptophan--tRNA ligase;protein_id=WP_001094616.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 202499 203029 . + . ID=gene-CCO57_RS01045;Name=CCO57_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01045;old_locus_tag=CCO57_01045 NZ_NPMC01000001.1 Protein Homology CDS 202499 203029 . + 0 ID=cds-WP_000907671.1;Parent=gene-CCO57_RS01045;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=CCO57_RS01045;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 203268 204002 . + . ID=gene-CCO57_RS01055;Name=CCO57_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01055;old_locus_tag=CCO57_01055 NZ_NPMC01000001.1 Protein Homology CDS 203268 204002 . + 0 ID=cds-WP_000683243.1;Parent=gene-CCO57_RS01055;Dbxref=GenBank:WP_000683243.1;Name=WP_000683243.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=CCO57_RS01055;product=aspartate/glutamate racemase family protein;protein_id=WP_000683243.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 204008 204916 . - . ID=gene-CCO57_RS01060;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=CCO57_RS01060;old_locus_tag=CCO57_01060 NZ_NPMC01000001.1 Protein Homology CDS 204008 204916 . - 0 ID=cds-WP_000383509.1;Parent=gene-CCO57_RS01060;Dbxref=GenBank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=CCO57_RS01060;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 205035 206207 . - . ID=gene-CCO57_RS01065;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=CCO57_RS01065;old_locus_tag=CCO57_01065 NZ_NPMC01000001.1 Protein Homology CDS 205035 206207 . - 0 ID=cds-WP_001113063.1;Parent=gene-CCO57_RS01065;Dbxref=GenBank:WP_001113063.1;Name=WP_001113063.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=CCO57_RS01065;product=beta-aspartyl-peptidase;protein_id=WP_001113063.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 206220 206681 . - . ID=gene-CCO57_RS01070;Name=CCO57_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01070;old_locus_tag=CCO57_01070 NZ_NPMC01000001.1 Protein Homology CDS 206220 206681 . - 0 ID=cds-WP_000211979.1;Parent=gene-CCO57_RS01070;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=CCO57_RS01070;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 206678 207349 . - . ID=gene-CCO57_RS01075;Name=CCO57_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01075;old_locus_tag=CCO57_01075 NZ_NPMC01000001.1 Protein Homology CDS 206678 207349 . - 0 ID=cds-WP_000068752.1;Parent=gene-CCO57_RS01075;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=CCO57_RS01075;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 208221 209405 . - . ID=gene-CCO57_RS01080;Name=CCO57_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01080;old_locus_tag=CCO57_01080 NZ_NPMC01000001.1 Protein Homology CDS 208221 209405 . - 0 ID=cds-WP_094914775.1;Parent=gene-CCO57_RS01080;Dbxref=GenBank:WP_094914775.1;Name=WP_094914775.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=CCO57_RS01080;product=MFS transporter;protein_id=WP_094914775.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 209625 210896 . - . ID=gene-CCO57_RS01085;Name=CCO57_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01085;old_locus_tag=CCO57_01085 NZ_NPMC01000001.1 Protein Homology CDS 209625 210896 . - 0 ID=cds-WP_001033033.1;Parent=gene-CCO57_RS01085;Dbxref=GenBank:WP_001033033.1;Name=WP_001033033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=CCO57_RS01085;product=DUF445 domain-containing protein;protein_id=WP_001033033.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 210983 212224 . - . ID=gene-CCO57_RS01090;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=CCO57_RS01090;old_locus_tag=CCO57_01090 NZ_NPMC01000001.1 Protein Homology CDS 210983 212224 . - 0 ID=cds-WP_001188918.1;Parent=gene-CCO57_RS01090;Dbxref=GenBank:WP_001188918.1;Name=WP_001188918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=CCO57_RS01090;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 212703 213656 . + . ID=gene-CCO57_RS01095;Name=CCO57_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01095;old_locus_tag=CCO57_01095 NZ_NPMC01000001.1 Protein Homology CDS 212703 213656 . + 0 ID=cds-WP_094914776.1;Parent=gene-CCO57_RS01095;Dbxref=GenBank:WP_094914776.1;Name=WP_094914776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=CCO57_RS01095;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_094914776.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 213837 215207 . + . ID=gene-CCO57_RS01100;Name=CCO57_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01100;old_locus_tag=CCO57_01100 NZ_NPMC01000001.1 Protein Homology CDS 213837 215207 . + 0 ID=cds-WP_094914777.1;Parent=gene-CCO57_RS01100;Dbxref=GenBank:WP_094914777.1;Name=WP_094914777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=CCO57_RS01100;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_094914777.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 215303 215446 . - . ID=gene-CCO57_RS01105;Name=CCO57_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01105;old_locus_tag=CCO57_01105 NZ_NPMC01000001.1 Protein Homology CDS 215303 215446 . - 0 ID=cds-WP_094914778.1;Parent=gene-CCO57_RS01105;Dbxref=GenBank:WP_094914778.1;Name=WP_094914778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=CCO57_RS01105;product=hypothetical protein;protein_id=WP_094914778.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 215413 215577 . + . ID=gene-CCO57_RS01110;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=CCO57_RS01110;old_locus_tag=CCO57_01110 NZ_NPMC01000001.1 Protein Homology CDS 215413 215577 . + 0 ID=cds-WP_094914779.1;Parent=gene-CCO57_RS01110;Dbxref=GenBank:WP_094914779.1;Name=WP_094914779.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=CCO57_RS01110;product=DUF1127 domain-containing protein YjiS;protein_id=WP_094914779.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 215652 216353 . - . ID=gene-CCO57_RS01115;Name=CCO57_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01115;old_locus_tag=CCO57_01115 NZ_NPMC01000001.1 Protein Homology CDS 215652 216353 . - 0 ID=cds-WP_076166983.1;Parent=gene-CCO57_RS01115;Dbxref=GenBank:WP_076166983.1;Name=WP_076166983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463381.1;locus_tag=CCO57_RS01115;product=hypothetical protein;protein_id=WP_076166983.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 216427 216759 . - . ID=gene-CCO57_RS01120;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=CCO57_RS01120;old_locus_tag=CCO57_01120 NZ_NPMC01000001.1 Protein Homology CDS 216427 216759 . - 0 ID=cds-WP_094914780.1;Parent=gene-CCO57_RS01120;Dbxref=GenBank:WP_094914780.1;Name=WP_094914780.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463382.1;locus_tag=CCO57_RS01120;product=endoribonuclease SymE;protein_id=WP_094914780.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 217054 217695 . - . ID=gene-CCO57_RS01125;Name=CCO57_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01125;old_locus_tag=CCO57_01125 NZ_NPMC01000001.1 Protein Homology CDS 217054 217695 . - 0 ID=cds-WP_000438685.1;Parent=gene-CCO57_RS01125;Dbxref=GenBank:WP_000438685.1;Name=WP_000438685.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727645.1;locus_tag=CCO57_RS01125;product=LysE family translocator;protein_id=WP_000438685.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 217743 218558 . - . ID=gene-CCO57_RS01130;Name=CCO57_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01130;old_locus_tag=CCO57_01130 NZ_NPMC01000001.1 Protein Homology CDS 217743 218558 . - 0 ID=cds-WP_001647390.1;Parent=gene-CCO57_RS01130;Dbxref=GenBank:WP_001647390.1;Name=WP_001647390.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001128428.1;locus_tag=CCO57_RS01130;product=AraC family transcriptional regulator;protein_id=WP_001647390.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 218595 219551 . - . ID=gene-CCO57_RS01135;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=CCO57_RS01135;old_locus_tag=CCO57_01135 NZ_NPMC01000001.1 Protein Homology CDS 218595 219551 . - 0 ID=cds-WP_094914781.1;Parent=gene-CCO57_RS01135;Dbxref=GenBank:WP_094914781.1;Name=WP_094914781.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=CCO57_RS01135;product=GTPase;protein_id=WP_094914781.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 219562 219765 . - . ID=gene-CCO57_RS01140;Name=CCO57_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01140;old_locus_tag=CCO57_01140 NZ_NPMC01000001.1 Protein Homology CDS 219562 219765 . - 0 ID=cds-WP_000460616.1;Parent=gene-CCO57_RS01140;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=CCO57_RS01140;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 219860 222010 . - . ID=gene-CCO57_RS01145;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=CCO57_RS01145;old_locus_tag=CCO57_01145 NZ_NPMC01000001.1 Protein Homology CDS 219860 222010 . - 0 ID=cds-WP_058820999.1;Parent=gene-CCO57_RS01145;Dbxref=GenBank:WP_058820999.1;Name=WP_058820999.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=CCO57_RS01145;product=pyruvate/proton symporter BtsT;protein_id=WP_058820999.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 222377 224038 . + . ID=gene-CCO57_RS01150;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=CCO57_RS01150;old_locus_tag=CCO57_01150 NZ_NPMC01000001.1 Protein Homology CDS 222377 224038 . + 0 ID=cds-WP_000919521.1;Parent=gene-CCO57_RS01150;Dbxref=GenBank:WP_000919521.1;Name=WP_000919521.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=CCO57_RS01150;product=methyl-accepting chemotaxis protein;protein_id=WP_000919521.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 224207 226498 . - . ID=gene-CCO57_RS01155;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=CCO57_RS01155;old_locus_tag=CCO57_01155 NZ_NPMC01000001.1 Protein Homology CDS 224207 226498 . - 0 ID=cds-WP_094914782.1;Parent=gene-CCO57_RS01155;Dbxref=GenBank:WP_094914782.1;Name=WP_094914782.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465680.1;locus_tag=CCO57_RS01155;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_094914782.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 226781 227272 . - . ID=gene-CCO57_RS01160;Name=CCO57_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01160;old_locus_tag=CCO57_01160 NZ_NPMC01000001.1 Protein Homology CDS 226781 227272 . - 0 ID=cds-WP_023137541.1;Parent=gene-CCO57_RS01160;Dbxref=GenBank:WP_023137541.1;Name=WP_023137541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=CCO57_RS01160;product=DUF2501 domain-containing protein;protein_id=WP_023137541.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 227330 228067 . - . ID=gene-CCO57_RS01165;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=CCO57_RS01165;old_locus_tag=CCO57_01165 NZ_NPMC01000001.1 Protein Homology CDS 227330 228067 . - 0 ID=cds-WP_000799924.1;Parent=gene-CCO57_RS01165;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=CCO57_RS01165;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 228070 228609 . - . ID=gene-CCO57_RS01170;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=CCO57_RS01170;old_locus_tag=CCO57_01170 NZ_NPMC01000001.1 Protein Homology CDS 228070 228609 . - 0 ID=cds-WP_000098578.1;Parent=gene-CCO57_RS01170;Dbxref=GenBank:WP_000098578.1;Name=WP_000098578.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=CCO57_RS01170;product=primosomal protein DnaT;protein_id=WP_000098578.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 228702 229175 . - . ID=gene-CCO57_RS01175;Name=CCO57_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01175;old_locus_tag=CCO57_01175 NZ_NPMC01000001.1 Protein Homology CDS 228702 229175 . - 0 ID=cds-WP_000511329.1;Parent=gene-CCO57_RS01175;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=CCO57_RS01175;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 229166 229942 . - . ID=gene-CCO57_RS01180;Name=CCO57_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01180;old_locus_tag=CCO57_01180 NZ_NPMC01000001.1 Protein Homology CDS 229166 229942 . - 0 ID=cds-WP_001674846.1;Parent=gene-CCO57_RS01180;Dbxref=GenBank:WP_001674846.1;Name=WP_001674846.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=CCO57_RS01180;product=threonine/serine ThrE exporter family protein;protein_id=WP_001674846.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 230654 231379 . + . ID=gene-CCO57_RS01185;Name=CCO57_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01185;old_locus_tag=CCO57_01185 NZ_NPMC01000001.1 Protein Homology CDS 230654 231379 . + 0 ID=cds-WP_000936659.1;Parent=gene-CCO57_RS01185;Dbxref=GenBank:WP_000936659.1;Name=WP_000936659.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=CCO57_RS01185;product=response regulator transcription factor;protein_id=WP_000936659.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 231340 232014 . + . ID=gene-CCO57_RS01190;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=CCO57_RS01190;old_locus_tag=CCO57_01190 NZ_NPMC01000001.1 Protein Homology CDS 231340 232014 . + 0 ID=cds-WP_000431546.1;Parent=gene-CCO57_RS01190;Dbxref=GenBank:WP_000431546.1;Name=WP_000431546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=CCO57_RS01190;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 232065 232523 . - . ID=gene-CCO57_RS01195;Name=CCO57_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01195;old_locus_tag=CCO57_01195 NZ_NPMC01000001.1 Protein Homology CDS 232065 232523 . - 0 ID=cds-WP_000058271.1;Parent=gene-CCO57_RS01195;Dbxref=GenBank:WP_000058271.1;Name=WP_000058271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=CCO57_RS01195;product=YbaK/EbsC family protein;protein_id=WP_000058271.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 232674 233462 . - . ID=gene-CCO57_RS01200;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=CCO57_RS01200;old_locus_tag=CCO57_01200 NZ_NPMC01000001.1 Protein Homology CDS 232674 233462 . - 0 ID=cds-WP_000331529.1;Parent=gene-CCO57_RS01200;Dbxref=GenBank:WP_000331529.1;Name=WP_000331529.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=CCO57_RS01200;product=siderophore-iron reductase FhuF;protein_id=WP_000331529.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 233583 234647 . - . ID=gene-CCO57_RS01205;Name=CCO57_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01205;old_locus_tag=CCO57_01205 NZ_NPMC01000001.1 Protein Homology CDS 233583 234647 . - 0 ID=cds-WP_094914783.1;Parent=gene-CCO57_RS01205;Dbxref=GenBank:WP_094914783.1;Name=WP_094914783.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=CCO57_RS01205;product=GGDEF domain-containing protein;protein_id=WP_094914783.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 234898 235134 . + . ID=gene-CCO57_RS01210;Name=CCO57_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01210;old_locus_tag=CCO57_01210 NZ_NPMC01000001.1 Protein Homology CDS 234898 235134 . + 0 ID=cds-WP_023251586.1;Parent=gene-CCO57_RS01210;Dbxref=GenBank:WP_023251586.1;Name=WP_023251586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=CCO57_RS01210;product=DUF1435 domain-containing protein;protein_id=WP_023251586.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 235166 235252 . - . ID=gene-CCO57_RS01215;Name=CCO57_RS01215;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS01215;old_locus_tag=CCO57_01215 NZ_NPMC01000001.1 tRNAscan-SE tRNA 235166 235252 . - . ID=rna-CCO57_RS01215;Parent=gene-CCO57_RS01215;anticodon=(pos:complement(235216..235218));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS01215;product=tRNA-Leu NZ_NPMC01000001.1 tRNAscan-SE exon 235166 235252 . - . ID=exon-CCO57_RS01215-1;Parent=rna-CCO57_RS01215;anticodon=(pos:complement(235216..235218));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS01215;product=tRNA-Leu NZ_NPMC01000001.1 RefSeq gene 235284 235370 . - . ID=gene-CCO57_RS01220;Name=CCO57_RS01220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS01220;old_locus_tag=CCO57_01220 NZ_NPMC01000001.1 tRNAscan-SE tRNA 235284 235370 . - . ID=rna-CCO57_RS01220;Parent=gene-CCO57_RS01220;anticodon=(pos:complement(235334..235336));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS01220;product=tRNA-Leu NZ_NPMC01000001.1 tRNAscan-SE exon 235284 235370 . - . ID=exon-CCO57_RS01220-1;Parent=rna-CCO57_RS01220;anticodon=(pos:complement(235334..235336));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS01220;product=tRNA-Leu NZ_NPMC01000001.1 RefSeq gene 235398 235484 . - . ID=gene-CCO57_RS01225;Name=CCO57_RS01225;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS01225;old_locus_tag=CCO57_01225 NZ_NPMC01000001.1 tRNAscan-SE tRNA 235398 235484 . - . ID=rna-CCO57_RS01225;Parent=gene-CCO57_RS01225;anticodon=(pos:complement(235448..235450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS01225;product=tRNA-Leu NZ_NPMC01000001.1 tRNAscan-SE exon 235398 235484 . - . ID=exon-CCO57_RS01225-1;Parent=rna-CCO57_RS01225;anticodon=(pos:complement(235448..235450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS01225;product=tRNA-Leu NZ_NPMC01000001.1 RefSeq gene 235675 236703 . - . ID=gene-CCO57_RS01230;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=CCO57_RS01230;old_locus_tag=CCO57_01230 NZ_NPMC01000001.1 Protein Homology CDS 235675 236703 . - 0 ID=cds-WP_079812992.1;Parent=gene-CCO57_RS01230;Dbxref=GenBank:WP_079812992.1;Name=WP_079812992.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=CCO57_RS01230;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_079812992.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 236806 237243 . + . ID=gene-CCO57_RS01235;Name=CCO57_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01235;old_locus_tag=CCO57_01235 NZ_NPMC01000001.1 Protein Homology CDS 236806 237243 . + 0 ID=cds-WP_000203996.1;Parent=gene-CCO57_RS01235;Dbxref=GenBank:WP_000203996.1;Name=WP_000203996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=CCO57_RS01235;product=DNA polymerase III subunit psi;protein_id=WP_000203996.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 237188 237634 . + . ID=gene-CCO57_RS01240;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CCO57_RS01240;old_locus_tag=CCO57_01240 NZ_NPMC01000001.1 Protein Homology CDS 237188 237634 . + 0 ID=cds-WP_023207490.1;Parent=gene-CCO57_RS01240;Dbxref=GenBank:WP_023207490.1;Name=WP_023207490.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=CCO57_RS01240;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_023207490.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 237656 238333 . + . ID=gene-CCO57_RS01245;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=CCO57_RS01245;old_locus_tag=CCO57_01245 NZ_NPMC01000001.1 Protein Homology CDS 237656 238333 . + 0 ID=cds-WP_000870686.1;Parent=gene-CCO57_RS01245;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=CCO57_RS01245;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 238425 240014 . + . ID=gene-CCO57_RS01250;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=CCO57_RS01250;old_locus_tag=CCO57_01250 NZ_NPMC01000001.1 Protein Homology CDS 238425 240014 . + 0 ID=cds-WP_000175965.1;Parent=gene-CCO57_RS01250;Dbxref=GenBank:WP_000175965.1;Name=WP_000175965.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=CCO57_RS01250;product=peptide chain release factor 3;protein_id=WP_000175965.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 240416 241033 . + . ID=gene-CCO57_RS01255;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO57_RS01255;old_locus_tag=CCO57_01255 NZ_NPMC01000001.1 Protein Homology CDS 240416 241033 . + 0 ID=cds-WP_000178963.1;Parent=gene-CCO57_RS01255;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=CCO57_RS01255;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 241162 241323 . + . ID=gene-CCO57_RS01260;Name=CCO57_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01260;old_locus_tag=CCO57_01260 NZ_NPMC01000001.1 Protein Homology CDS 241162 241323 . + 0 ID=cds-WP_000490276.1;Parent=gene-CCO57_RS01260;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=CCO57_RS01260;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 241447 242520 . + . ID=gene-CCO57_RS01265;Name=CCO57_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01265;old_locus_tag=CCO57_01265 NZ_NPMC01000001.1 Protein Homology CDS 241447 242520 . + 0 ID=cds-WP_000531540.1;Parent=gene-CCO57_RS01265;Dbxref=GenBank:WP_000531540.1;Name=WP_000531540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=CCO57_RS01265;product=patatin-like phospholipase family protein;protein_id=WP_000531540.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 242517 243290 . + . ID=gene-CCO57_RS01270;Name=CCO57_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01270;old_locus_tag=CCO57_01270 NZ_NPMC01000001.1 Protein Homology CDS 242517 243290 . + 0 ID=cds-WP_023224466.1;Parent=gene-CCO57_RS01270;Dbxref=GenBank:WP_023224466.1;Name=WP_023224466.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=CCO57_RS01270;product=metal-dependent hydrolase;protein_id=WP_023224466.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 243323 244186 . - . ID=gene-CCO57_RS01275;Name=CCO57_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01275;old_locus_tag=CCO57_01275 NZ_NPMC01000001.1 Protein Homology CDS 243323 244186 . - 0 ID=cds-WP_094888324.1;Parent=gene-CCO57_RS01275;Dbxref=GenBank:WP_094888324.1;Name=WP_094888324.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=CCO57_RS01275;product=YjjW family glycine radical enzyme activase;protein_id=WP_094888324.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 244158 245708 . - . ID=gene-CCO57_RS01280;Name=CCO57_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01280;old_locus_tag=CCO57_01280 NZ_NPMC01000001.1 Protein Homology CDS 244158 245708 . - 0 ID=cds-WP_001111686.1;Parent=gene-CCO57_RS01280;Dbxref=GenBank:WP_001111686.1;Name=WP_001111686.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=CCO57_RS01280;product=YjjI family glycine radical enzyme;protein_id=WP_001111686.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 245968 246747 . + . ID=gene-CCO57_RS01285;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CCO57_RS01285;old_locus_tag=CCO57_01285 NZ_NPMC01000001.1 Protein Homology CDS 245968 246747 . + 0 ID=cds-WP_001519713.1;Parent=gene-CCO57_RS01285;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=CCO57_RS01285;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 246871 248193 . + . ID=gene-CCO57_RS01290;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=CCO57_RS01290;old_locus_tag=CCO57_01290 NZ_NPMC01000001.1 Protein Homology CDS 246871 248193 . + 0 ID=cds-WP_094914784.1;Parent=gene-CCO57_RS01290;Dbxref=GenBank:WP_094914784.1;Name=WP_094914784.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=CCO57_RS01290;product=thymidine phosphorylase;protein_id=WP_094914784.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 248245 249468 . + . ID=gene-CCO57_RS01295;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CCO57_RS01295;old_locus_tag=CCO57_01295 NZ_NPMC01000001.1 Protein Homology CDS 248245 249468 . + 0 ID=cds-WP_000816454.1;Parent=gene-CCO57_RS01295;Dbxref=GenBank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=CCO57_RS01295;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 249678 250397 . + . ID=gene-CCO57_RS01300;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CCO57_RS01300;old_locus_tag=CCO57_01300 NZ_NPMC01000001.1 Protein Homology CDS 249678 250397 . + 0 ID=cds-WP_000224864.1;Parent=gene-CCO57_RS01300;Dbxref=GenBank:WP_000224864.1;Name=WP_000224864.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=CCO57_RS01300;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 250435 251007 . - . ID=gene-CCO57_RS01305;Name=CCO57_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01305;old_locus_tag=CCO57_01305 NZ_NPMC01000001.1 Protein Homology CDS 250435 251007 . - 0 ID=cds-WP_079962664.1;Parent=gene-CCO57_RS01305;Dbxref=GenBank:WP_079962664.1;Name=WP_079962664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463427.1;locus_tag=CCO57_RS01305;product=hypothetical protein;protein_id=WP_079962664.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 251004 253412 . - . ID=gene-CCO57_RS01310;Name=CCO57_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01310;old_locus_tag=CCO57_01310 NZ_NPMC01000001.1 Protein Homology CDS 251004 253412 . - 0 ID=cds-WP_015406150.1;Parent=gene-CCO57_RS01310;Dbxref=GenBank:WP_015406150.1;Name=WP_015406150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463428.1;locus_tag=CCO57_RS01310;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_015406150.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 253426 254133 . - . ID=gene-CCO57_RS01315;Name=stjC;gbkey=Gene;gene=stjC;gene_biotype=protein_coding;locus_tag=CCO57_RS01315;old_locus_tag=CCO57_01315 NZ_NPMC01000001.1 Protein Homology CDS 253426 254133 . - 0 ID=cds-WP_001112028.1;Parent=gene-CCO57_RS01315;Dbxref=GenBank:WP_001112028.1;Name=WP_001112028.1;gbkey=CDS;gene=stjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463429.1;locus_tag=CCO57_RS01315;product=fimbrial biogenesis chaperone StjC;protein_id=WP_001112028.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 254211 254900 . - . ID=gene-CCO57_RS01320;Name=CCO57_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01320;old_locus_tag=CCO57_01320 NZ_NPMC01000001.1 Protein Homology CDS 254211 254900 . - 0 ID=cds-WP_000722273.1;Parent=gene-CCO57_RS01320;Dbxref=GenBank:WP_000722273.1;Name=WP_000722273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463430.1;locus_tag=CCO57_RS01320;product=DUF1120 domain-containing protein;protein_id=WP_000722273.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 254948 255637 . - . ID=gene-CCO57_RS01325;Name=CCO57_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01325;old_locus_tag=CCO57_01325 NZ_NPMC01000001.1 Protein Homology CDS 254948 255637 . - 0 ID=cds-WP_001527213.1;Parent=gene-CCO57_RS01325;Dbxref=GenBank:WP_001527213.1;Name=WP_001527213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463431.1;locus_tag=CCO57_RS01325;product=DUF1120 domain-containing protein;protein_id=WP_001527213.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 255948 256964 . - . ID=gene-CCO57_RS24025;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=CCO57_RS24025 NZ_NPMC01000001.1 Protein Homology CDS 255948 256964 . - 0 ID=cds-WP_140428169.1;Parent=gene-CCO57_RS24025;Dbxref=GenBank:WP_140428169.1;Name=WP_140428169.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=CCO57_RS24025;product=lipoate--protein ligase LplA;protein_id=WP_140428169.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 256998 257642 . - . ID=gene-CCO57_RS24030;Name=CCO57_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24030 NZ_NPMC01000001.1 Protein Homology CDS 256998 257642 . - 0 ID=cds-WP_000090067.1;Parent=gene-CCO57_RS24030;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=CCO57_RS24030;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 257759 258727 . + . ID=gene-CCO57_RS01345;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO57_RS01345;old_locus_tag=CCO57_01345 NZ_NPMC01000001.1 Protein Homology CDS 257759 258727 . + 0 ID=cds-WP_001132983.1;Parent=gene-CCO57_RS01345;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=CCO57_RS01345;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 258811 260193 . + . ID=gene-CCO57_RS01350;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CCO57_RS01350;old_locus_tag=CCO57_01350 NZ_NPMC01000001.1 Protein Homology CDS 258811 260193 . + 0 ID=cds-WP_001029710.1;Parent=gene-CCO57_RS01350;Dbxref=GenBank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=CCO57_RS01350;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 260344 261576 . + . ID=gene-CCO57_RS01355;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=CCO57_RS01355;old_locus_tag=CCO57_01355 NZ_NPMC01000001.1 Protein Homology CDS 260344 261576 . + 0 ID=cds-WP_000093829.1;Parent=gene-CCO57_RS01355;Dbxref=GenBank:WP_000093829.1;Name=WP_000093829.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=CCO57_RS01355;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093829.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 261694 263361 . - . ID=gene-CCO57_RS01360;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=CCO57_RS01360;old_locus_tag=CCO57_01360 NZ_NPMC01000001.1 Protein Homology CDS 261694 263361 . - 0 ID=cds-WP_094914785.1;Parent=gene-CCO57_RS01360;Dbxref=GenBank:WP_094914785.1;Name=WP_094914785.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=CCO57_RS01360;product=energy-dependent translational throttle protein EttA;protein_id=WP_094914785.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 263537 265507 . + . ID=gene-CCO57_RS01370;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=CCO57_RS01370;old_locus_tag=CCO57_01370 NZ_NPMC01000001.1 Protein Homology CDS 263537 265507 . + 0 ID=cds-WP_263298995.1;Parent=gene-CCO57_RS01370;Dbxref=GenBank:WP_263298995.1;Name=WP_263298995.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=CCO57_RS01370;product=murein transglycosylase;protein_id=WP_263298995.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 265565 265891 . + . ID=gene-CCO57_RS01375;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=CCO57_RS01375;old_locus_tag=CCO57_01375 NZ_NPMC01000001.1 Protein Homology CDS 265565 265891 . + 0 ID=cds-WP_000192005.1;Parent=gene-CCO57_RS01375;Dbxref=GenBank:WP_000192005.1;Name=WP_000192005.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=CCO57_RS01375;product=trp operon repressor;protein_id=WP_000192005.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 265993 266508 . - . ID=gene-CCO57_RS01380;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=CCO57_RS01380;old_locus_tag=CCO57_01380 NZ_NPMC01000001.1 Protein Homology CDS 265993 266508 . - 0 ID=cds-WP_000554307.1;Parent=gene-CCO57_RS01380;Dbxref=GenBank:WP_000554307.1;Name=WP_000554307.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=CCO57_RS01380;product=inosine/xanthosine triphosphatase;protein_id=WP_000554307.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 266557 267204 . + . ID=gene-CCO57_RS01385;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=CCO57_RS01385;old_locus_tag=CCO57_01385 NZ_NPMC01000001.1 Protein Homology CDS 266557 267204 . + 0 ID=cds-WP_000942363.1;Parent=gene-CCO57_RS01385;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=CCO57_RS01385;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 267201 268070 . - . ID=gene-CCO57_RS01390;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=CCO57_RS01390;old_locus_tag=CCO57_01390 NZ_NPMC01000001.1 Protein Homology CDS 267201 268070 . - 0 ID=cds-WP_000371685.1;Parent=gene-CCO57_RS01390;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=CCO57_RS01390;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 268282 268755 . + . ID=gene-CCO57_RS01395;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=CCO57_RS01395;old_locus_tag=CCO57_01395 NZ_NPMC01000001.1 Protein Homology CDS 268282 268755 . + 0 ID=cds-WP_000875811.1;Parent=gene-CCO57_RS01395;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=CCO57_RS01395;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 268768 269456 . + . ID=gene-CCO57_RS01400;Name=creB;gbkey=Gene;gene=creB;gene_biotype=pseudogene;locus_tag=CCO57_RS01400;old_locus_tag=CCO57_01400;pseudo=true NZ_NPMC01000001.1 Protein Homology CDS 268768 269456 . + 0 ID=cds-CCO57_RS01400;Parent=gene-CCO57_RS01400;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=CCO57_RS01400;product=two-component system response regulator CreB;pseudo=true;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 269456 270880 . + . ID=gene-CCO57_RS01405;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=CCO57_RS01405;old_locus_tag=CCO57_01405 NZ_NPMC01000001.1 Protein Homology CDS 269456 270880 . + 0 ID=cds-WP_031570599.1;Parent=gene-CCO57_RS01405;Dbxref=GenBank:WP_031570599.1;Name=WP_031570599.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=CCO57_RS01405;product=two-component system sensor histidine kinase CreC;protein_id=WP_031570599.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 270938 272287 . + . ID=gene-CCO57_RS01410;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=CCO57_RS01410;old_locus_tag=CCO57_01410 NZ_NPMC01000001.1 Protein Homology CDS 270938 272287 . + 0 ID=cds-WP_000920388.1;Parent=gene-CCO57_RS01410;Dbxref=GenBank:WP_000920388.1;Name=WP_000920388.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=CCO57_RS01410;product=cell envelope integrity protein CreD;protein_id=WP_000920388.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 272345 273430 . - . ID=gene-CCO57_RS01415;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=CCO57_RS01415;old_locus_tag=CCO57_01415 NZ_NPMC01000001.1 Protein Homology CDS 272345 273430 . - 0 ID=cds-WP_001253757.1;Parent=gene-CCO57_RS01415;Dbxref=GenBank:WP_001253757.1;Name=WP_001253757.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=CCO57_RS01415;product=fimbrial major subunit SthE;protein_id=WP_001253757.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 273471 274028 . - . ID=gene-CCO57_RS01420;Name=CCO57_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01420;old_locus_tag=CCO57_01420 NZ_NPMC01000001.1 Protein Homology CDS 273471 274028 . - 0 ID=cds-WP_001056991.1;Parent=gene-CCO57_RS01420;Dbxref=GenBank:WP_001056991.1;Name=WP_001056991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=CCO57_RS01420;product=fimbrial protein;protein_id=WP_001056991.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 274046 276583 . - . ID=gene-CCO57_RS01425;Name=CCO57_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01425;old_locus_tag=CCO57_01425 NZ_NPMC01000001.1 Protein Homology CDS 274046 276583 . - 0 ID=cds-WP_094914786.1;Parent=gene-CCO57_RS01425;Dbxref=GenBank:WP_094914786.1;Name=WP_094914786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=CCO57_RS01425;product=fimbrial outer membrane usher protein;protein_id=WP_094914786.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 276629 277312 . - . ID=gene-CCO57_RS01430;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO57_RS01430;old_locus_tag=CCO57_01430 NZ_NPMC01000001.1 Protein Homology CDS 276629 277312 . - 0 ID=cds-WP_000680522.1;Parent=gene-CCO57_RS01430;Dbxref=GenBank:WP_000680522.1;Name=WP_000680522.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=CCO57_RS01430;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680522.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 277383 277928 . - . ID=gene-CCO57_RS01435;Name=CCO57_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01435;old_locus_tag=CCO57_01435 NZ_NPMC01000001.1 Protein Homology CDS 277383 277928 . - 0 ID=cds-WP_000482237.1;Parent=gene-CCO57_RS01435;Dbxref=GenBank:WP_000482237.1;Name=WP_000482237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=CCO57_RS01435;product=fimbrial protein;protein_id=WP_000482237.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 278267 278938 . - . ID=gene-CCO57_RS01440;Name=CCO57_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01440;old_locus_tag=CCO57_01440 NZ_NPMC01000001.1 Protein Homology CDS 278267 278938 . - 0 ID=cds-WP_000811639.1;Parent=gene-CCO57_RS01440;Dbxref=GenBank:WP_000811639.1;Name=WP_000811639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=CCO57_RS01440;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811639.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 279323 279637 . - . ID=gene-CCO57_RS01445;Name=CCO57_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01445;old_locus_tag=CCO57_01445 NZ_NPMC01000001.1 Protein Homology CDS 279323 279637 . - 0 ID=cds-WP_000749515.1;Parent=gene-CCO57_RS01445;Dbxref=GenBank:WP_000749515.1;Name=WP_000749515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=CCO57_RS01445;product=hypothetical protein;protein_id=WP_000749515.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 279904 280620 . - . ID=gene-CCO57_RS01450;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO57_RS01450;old_locus_tag=CCO57_01450 NZ_NPMC01000001.1 Protein Homology CDS 279904 280620 . - 0 ID=cds-WP_001194359.1;Parent=gene-CCO57_RS01450;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=CCO57_RS01450;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 280716 280856 . + . ID=gene-CCO57_RS01455;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=CCO57_RS01455;old_locus_tag=CCO57_01455 NZ_NPMC01000001.1 Protein Homology CDS 280716 280856 . + 0 ID=cds-WP_001541509.1;Parent=gene-CCO57_RS01455;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=CCO57_RS01455;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 281256 281942 . + . ID=gene-CCO57_RS01460;Name=CCO57_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01460;old_locus_tag=CCO57_01460 NZ_NPMC01000001.1 Protein Homology CDS 281256 281942 . + 0 ID=cds-WP_001266769.1;Parent=gene-CCO57_RS01460;Dbxref=GenBank:WP_001266769.1;Name=WP_001266769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=CCO57_RS01460;product=tRNA/rRNA methyltransferase;protein_id=WP_001266769.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 282156 282221 . + . ID=gene-CCO57_RS01465;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=CCO57_RS01465;old_locus_tag=CCO57_01465 NZ_NPMC01000001.1 Protein Homology CDS 282156 282221 . + 0 ID=cds-WP_001575544.1;Parent=gene-CCO57_RS01465;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=CCO57_RS01465;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_NPMC01000001.1 cmsearch sequence_feature 282157 282277 . + . ID=id-NZ_NPMC01000001.1:282157..282277;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMC01000001.1 RefSeq gene 282303 284765 . + . ID=gene-CCO57_RS01470;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=CCO57_RS01470;old_locus_tag=CCO57_01470 NZ_NPMC01000001.1 Protein Homology CDS 282303 284765 . + 0 ID=cds-WP_001264680.1;Parent=gene-CCO57_RS01470;Dbxref=GenBank:WP_001264680.1;Name=WP_001264680.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=CCO57_RS01470;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264680.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 284767 285696 . + . ID=gene-CCO57_RS01475;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CCO57_RS01475;old_locus_tag=CCO57_01475 NZ_NPMC01000001.1 Protein Homology CDS 284767 285696 . + 0 ID=cds-WP_000241685.1;Parent=gene-CCO57_RS01475;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=CCO57_RS01475;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 285700 286986 . + . ID=gene-CCO57_RS01480;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CCO57_RS01480;old_locus_tag=CCO57_01480 NZ_NPMC01000001.1 Protein Homology CDS 285700 286986 . + 0 ID=cds-WP_000781105.1;Parent=gene-CCO57_RS01480;Dbxref=GenBank:WP_000781105.1;Name=WP_000781105.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=CCO57_RS01480;product=threonine synthase;protein_id=WP_000781105.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 287080 287853 . - . ID=gene-CCO57_RS01485;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=CCO57_RS01485;old_locus_tag=CCO57_01485 NZ_NPMC01000001.1 Protein Homology CDS 287080 287853 . - 0 ID=cds-WP_000906172.1;Parent=gene-CCO57_RS01485;Dbxref=GenBank:WP_000906172.1;Name=WP_000906172.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=CCO57_RS01485;product=peroxide stress protein YaaA;protein_id=WP_000906172.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 287932 289362 . - . ID=gene-CCO57_RS01490;Name=CCO57_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01490;old_locus_tag=CCO57_01490 NZ_NPMC01000001.1 Protein Homology CDS 287932 289362 . - 0 ID=cds-WP_001113801.1;Parent=gene-CCO57_RS01490;Dbxref=GenBank:WP_001113801.1;Name=WP_001113801.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=CCO57_RS01490;product=alanine/glycine:cation symporter family protein;protein_id=WP_001113801.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 289631 290584 . + . ID=gene-CCO57_RS01495;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO57_RS01495;old_locus_tag=CCO57_01495 NZ_NPMC01000001.1 Protein Homology CDS 289631 290584 . + 0 ID=cds-WP_000130179.1;Parent=gene-CCO57_RS01495;Dbxref=GenBank:WP_000130179.1;Name=WP_000130179.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=CCO57_RS01495;product=transaldolase;protein_id=WP_000130179.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 290695 291285 . + . ID=gene-CCO57_RS01500;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=CCO57_RS01500;old_locus_tag=CCO57_01500 NZ_NPMC01000001.1 Protein Homology CDS 290695 291285 . + 0 ID=cds-WP_000380373.1;Parent=gene-CCO57_RS01500;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=CCO57_RS01500;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 291342 291908 . - . ID=gene-CCO57_RS01505;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=CCO57_RS01505;old_locus_tag=CCO57_01505 NZ_NPMC01000001.1 Protein Homology CDS 291342 291908 . - 0 ID=cds-WP_000528525.1;Parent=gene-CCO57_RS01505;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=CCO57_RS01505;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 292058 292771 . - . ID=gene-CCO57_RS01510;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=CCO57_RS01510;old_locus_tag=CCO57_01510 NZ_NPMC01000001.1 Protein Homology CDS 292058 292771 . - 0 ID=cds-WP_001103472.1;Parent=gene-CCO57_RS01510;Dbxref=GenBank:WP_001103472.1;Name=WP_001103472.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=CCO57_RS01510;product=acidic protein MsyB;protein_id=WP_001103472.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 292807 293211 . - . ID=gene-CCO57_RS01515;Name=CCO57_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01515;old_locus_tag=CCO57_01515 NZ_NPMC01000001.1 Protein Homology CDS 292807 293211 . - 0 ID=cds-WP_001258082.1;Parent=gene-CCO57_RS01515;Dbxref=GenBank:WP_001258082.1;Name=WP_001258082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=CCO57_RS01515;product=DUF2541 family protein;protein_id=WP_001258082.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 293560 295476 . + . ID=gene-CCO57_RS01520;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CCO57_RS01520;old_locus_tag=CCO57_01520 NZ_NPMC01000001.1 Protein Homology CDS 293560 295476 . + 0 ID=cds-WP_000516126.1;Parent=gene-CCO57_RS01520;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=CCO57_RS01520;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 295562 296701 . + . ID=gene-CCO57_RS01525;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CCO57_RS01525;old_locus_tag=CCO57_01525 NZ_NPMC01000001.1 Protein Homology CDS 295562 296701 . + 0 ID=cds-WP_001119009.1;Parent=gene-CCO57_RS01525;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=CCO57_RS01525;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 296982 297929 . + . ID=gene-CCO57_RS01530;Name=CCO57_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01530;old_locus_tag=CCO57_01530 NZ_NPMC01000001.1 Protein Homology CDS 296982 297929 . + 0 ID=cds-WP_000534916.1;Parent=gene-CCO57_RS01530;Dbxref=GenBank:WP_000534916.1;Name=WP_000534916.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=CCO57_RS01530;product=LysR family transcriptional regulator;protein_id=WP_000534916.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 298056 298400 . + . ID=gene-CCO57_RS01535;Name=CCO57_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01535;old_locus_tag=CCO57_01535 NZ_NPMC01000001.1 Protein Homology CDS 298056 298400 . + 0 ID=cds-WP_000026889.1;Parent=gene-CCO57_RS01535;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=CCO57_RS01535;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 298461 298994 . - . ID=gene-CCO57_RS01540;Name=CCO57_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01540;old_locus_tag=CCO57_01540 NZ_NPMC01000001.1 Protein Homology CDS 298461 298994 . - 0 ID=cds-WP_001068134.1;Parent=gene-CCO57_RS01540;Dbxref=GenBank:WP_001068134.1;Name=WP_001068134.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=CCO57_RS01540;product=glycoside hydrolase family 108 protein;protein_id=WP_001068134.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 299011 299454 . - . ID=gene-CCO57_RS01545;Name=CCO57_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01545;old_locus_tag=CCO57_01545 NZ_NPMC01000001.1 Protein Homology CDS 299011 299454 . - 0 ID=cds-WP_000860681.1;Parent=gene-CCO57_RS01545;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=CCO57_RS01545;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 299835 301934 . + . ID=gene-CCO57_RS01550;Name=CCO57_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01550;old_locus_tag=CCO57_01550 NZ_NPMC01000001.1 Protein Homology CDS 299835 301934 . + 0 ID=cds-WP_000235809.1;Parent=gene-CCO57_RS01550;Dbxref=GenBank:WP_000235809.1;Name=WP_000235809.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=CCO57_RS01550;product=glycosyl hydrolase family 18 protein;protein_id=WP_000235809.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 302027 305023 . + . ID=gene-CCO57_RS01555;Name=CCO57_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01555;old_locus_tag=CCO57_01555 NZ_NPMC01000001.1 Protein Homology CDS 302027 305023 . + 0 ID=cds-WP_031570575.1;Parent=gene-CCO57_RS01555;Dbxref=GenBank:WP_031570575.1;Name=WP_031570575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=CCO57_RS01555;product=hypothetical protein;protein_id=WP_031570575.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 305312 306007 . + . ID=gene-CCO57_RS01560;Name=CCO57_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01560;old_locus_tag=CCO57_01560 NZ_NPMC01000001.1 Protein Homology CDS 305312 306007 . + 0 ID=cds-WP_000980522.1;Parent=gene-CCO57_RS01560;Dbxref=GenBank:WP_000980522.1;Name=WP_000980522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527260.1;locus_tag=CCO57_RS01560;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000980522.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 306438 306980 . + . ID=gene-CCO57_RS01565;Name=CCO57_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01565;old_locus_tag=CCO57_01565 NZ_NPMC01000001.1 Protein Homology CDS 306438 306980 . + 0 ID=cds-WP_000743357.1;Parent=gene-CCO57_RS01565;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=CCO57_RS01565;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 307081 307767 . + . ID=gene-CCO57_RS01570;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=CCO57_RS01570;old_locus_tag=CCO57_01570 NZ_NPMC01000001.1 Protein Homology CDS 307081 307767 . + 0 ID=cds-WP_000742551.1;Parent=gene-CCO57_RS01570;Dbxref=GenBank:WP_000742551.1;Name=WP_000742551.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=CCO57_RS01570;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000742551.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 307772 310393 . + . ID=gene-CCO57_RS01575;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=CCO57_RS01575;old_locus_tag=CCO57_01575 NZ_NPMC01000001.1 Protein Homology CDS 307772 310393 . + 0 ID=cds-WP_001245840.1;Parent=gene-CCO57_RS01575;Dbxref=GenBank:WP_001245840.1;Name=WP_001245840.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=CCO57_RS01575;product=fimbrial usher BcfC;protein_id=WP_001245840.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 310394 311401 . + . ID=gene-CCO57_RS01580;Name=CCO57_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01580;old_locus_tag=CCO57_01580 NZ_NPMC01000001.1 Protein Homology CDS 310394 311401 . + 0 ID=cds-WP_000701256.1;Parent=gene-CCO57_RS01580;Dbxref=GenBank:WP_000701256.1;Name=WP_000701256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=CCO57_RS01580;product=fimbrial protein BcfD;protein_id=WP_000701256.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 311402 311947 . + . ID=gene-CCO57_RS01585;Name=CCO57_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01585;old_locus_tag=CCO57_01585 NZ_NPMC01000001.1 Protein Homology CDS 311402 311947 . + 0 ID=cds-WP_001082038.1;Parent=gene-CCO57_RS01585;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=CCO57_RS01585;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 311963 312481 . + . ID=gene-CCO57_RS01590;Name=CCO57_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01590;old_locus_tag=CCO57_01590 NZ_NPMC01000001.1 Protein Homology CDS 311963 312481 . + 0 ID=cds-WP_001243228.1;Parent=gene-CCO57_RS01590;Dbxref=GenBank:WP_001243228.1;Name=WP_001243228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=CCO57_RS01590;product=fimbrial protein BcfF;protein_id=WP_001243228.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 312447 313178 . + . ID=gene-CCO57_RS01595;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=CCO57_RS01595;old_locus_tag=CCO57_01595 NZ_NPMC01000001.1 Protein Homology CDS 312447 313178 . + 0 ID=cds-WP_001135030.1;Parent=gene-CCO57_RS01595;Dbxref=GenBank:WP_001135030.1;Name=WP_001135030.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=CCO57_RS01595;product=fimbrial chaperone BcfG;protein_id=WP_001135030.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 313243 314088 . + . ID=gene-CCO57_RS01600;Name=CCO57_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01600;old_locus_tag=CCO57_01600 NZ_NPMC01000001.1 Protein Homology CDS 313243 314088 . + 0 ID=cds-WP_000291402.1;Parent=gene-CCO57_RS01600;Dbxref=GenBank:WP_000291402.1;Name=WP_000291402.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=CCO57_RS01600;product=DsbA family protein;protein_id=WP_000291402.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 314156 314440 . + . ID=gene-CCO57_RS01605;Name=CCO57_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01605;old_locus_tag=CCO57_01605 NZ_NPMC01000001.1 Protein Homology CDS 314156 314440 . + 0 ID=cds-WP_000558466.1;Parent=gene-CCO57_RS01605;Dbxref=GenBank:WP_000558466.1;Name=WP_000558466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000558466.1;locus_tag=CCO57_RS01605;product=hypothetical protein;protein_id=WP_000558466.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 314562 314955 . - . ID=gene-CCO57_RS24885;Name=CCO57_RS24885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24885;old_locus_tag=CCO57_01610;pseudo=true NZ_NPMC01000001.1 Protein Homology CDS 314562 314955 . - 0 ID=cds-CCO57_RS24885;Parent=gene-CCO57_RS24885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248824.1;locus_tag=CCO57_RS24885;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 315778 315957 . + . ID=gene-CCO57_RS01615;Name=CCO57_RS01615;end_range=315957,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS01615;old_locus_tag=CCO57_01615;partial=true;pseudo=true NZ_NPMC01000001.1 Protein Homology CDS 315778 315957 . + 0 ID=cds-CCO57_RS01615;Parent=gene-CCO57_RS01615;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=315957,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007726487.1;locus_tag=CCO57_RS01615;partial=true;product=arylsulfatase;pseudo=true;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 316165 316461 . - . ID=gene-CCO57_RS01620;Name=CCO57_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01620;old_locus_tag=CCO57_01620 NZ_NPMC01000001.1 Protein Homology CDS 316165 316461 . - 0 ID=cds-WP_001542932.1;Parent=gene-CCO57_RS01620;Dbxref=GenBank:WP_001542932.1;Name=WP_001542932.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542932.1;locus_tag=CCO57_RS01620;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_001542932.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 316917 317681 . + . ID=gene-CCO57_RS01625;Name=CCO57_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01625;old_locus_tag=CCO57_01625 NZ_NPMC01000001.1 Protein Homology CDS 316917 317681 . + 0 ID=cds-WP_000052612.1;Parent=gene-CCO57_RS01625;Dbxref=GenBank:WP_000052612.1;Name=WP_000052612.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052612.1;locus_tag=CCO57_RS01625;product=outer membrane protein OmpK;protein_id=WP_000052612.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 317702 319195 . + . ID=gene-CCO57_RS01630;Name=CCO57_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01630;old_locus_tag=CCO57_01630 NZ_NPMC01000001.1 Protein Homology CDS 317702 319195 . + 0 ID=cds-WP_000754364.1;Parent=gene-CCO57_RS01630;Dbxref=GenBank:WP_000754364.1;Name=WP_000754364.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=CCO57_RS01630;product=sulfatase family protein;protein_id=WP_000754364.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 319299 320495 . + . ID=gene-CCO57_RS01635;Name=CCO57_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01635;old_locus_tag=CCO57_01635 NZ_NPMC01000001.1 Protein Homology CDS 319299 320495 . + 0 ID=cds-WP_001189142.1;Parent=gene-CCO57_RS01635;Dbxref=GenBank:WP_001189142.1;Name=WP_001189142.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=CCO57_RS01635;product=anaerobic sulfatase maturase;protein_id=WP_001189142.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 320513 321766 . + . ID=gene-CCO57_RS01640;Name=CCO57_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01640;old_locus_tag=CCO57_01640 NZ_NPMC01000001.1 Protein Homology CDS 320513 321766 . + 0 ID=cds-WP_000457886.1;Parent=gene-CCO57_RS01640;Dbxref=GenBank:WP_000457886.1;Name=WP_000457886.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=CCO57_RS01640;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_000457886.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 321885 322142 . + . ID=gene-CCO57_RS24890;Name=CCO57_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24890;old_locus_tag=CCO57_01645 NZ_NPMC01000001.1 Protein Homology CDS 321885 322142 . + 0 ID=cds-WP_000528977.1;Parent=gene-CCO57_RS24890;Dbxref=GenBank:WP_000528977.1;Name=WP_000528977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=CCO57_RS24890;product=hypothetical protein;protein_id=WP_000528977.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 322064 322291 . + . ID=gene-CCO57_RS24895;Name=CCO57_RS24895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24895;old_locus_tag=CCO57_01650;partial=true;pseudo=true;start_range=.,322064 NZ_NPMC01000001.1 Protein Homology CDS 322064 322291 . + 0 ID=cds-CCO57_RS24895;Parent=gene-CCO57_RS24895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=CCO57_RS24895;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;start_range=.,322064;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 322454 323620 . + . ID=gene-CCO57_RS01655;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CCO57_RS01655;old_locus_tag=CCO57_01655 NZ_NPMC01000001.1 Protein Homology CDS 322454 323620 . + 0 ID=cds-WP_000681340.1;Parent=gene-CCO57_RS01655;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=CCO57_RS01655;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 323682 324581 . + . ID=gene-CCO57_RS01660;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=CCO57_RS01660;old_locus_tag=CCO57_01660 NZ_NPMC01000001.1 Protein Homology CDS 323682 324581 . + 0 ID=cds-WP_000062872.1;Parent=gene-CCO57_RS01660;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=CCO57_RS01660;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 324636 326675 . - . ID=gene-CCO57_RS01665;Name=CCO57_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01665;old_locus_tag=CCO57_01665 NZ_NPMC01000001.1 Protein Homology CDS 324636 326675 . - 0 ID=cds-WP_001116449.1;Parent=gene-CCO57_RS01665;Dbxref=GenBank:WP_001116449.1;Name=WP_001116449.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=CCO57_RS01665;product=glycoside hydrolase family 31 protein;protein_id=WP_001116449.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 326715 328088 . - . ID=gene-CCO57_RS01670;Name=CCO57_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01670;old_locus_tag=CCO57_01670 NZ_NPMC01000001.1 Protein Homology CDS 326715 328088 . - 0 ID=cds-WP_000099988.1;Parent=gene-CCO57_RS01670;Dbxref=GenBank:WP_000099988.1;Name=WP_000099988.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=CCO57_RS01670;product=MFS transporter;protein_id=WP_000099988.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 328549 328812 . - . ID=gene-CCO57_RS01675;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CCO57_RS01675;old_locus_tag=CCO57_01675 NZ_NPMC01000001.1 Protein Homology CDS 328549 328812 . - 0 ID=cds-WP_001518655.1;Parent=gene-CCO57_RS01675;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=CCO57_RS01675;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 328918 329133 . + . ID=gene-CCO57_RS01680;Name=CCO57_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01680;old_locus_tag=CCO57_01680 NZ_NPMC01000001.1 Protein Homology CDS 328918 329133 . + 0 ID=cds-WP_001538903.1;Parent=gene-CCO57_RS01680;Dbxref=GenBank:WP_001538903.1;Name=WP_001538903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=CCO57_RS01680;product=DUF2575 family protein;protein_id=WP_001538903.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 329141 330079 . + . ID=gene-CCO57_RS01685;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=CCO57_RS01685;old_locus_tag=CCO57_01685 NZ_NPMC01000001.1 Protein Homology CDS 329141 330079 . + 0 ID=cds-WP_000767311.1;Parent=gene-CCO57_RS01685;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=CCO57_RS01685;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 330124 332958 . + . ID=gene-CCO57_RS01690;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CCO57_RS01690;old_locus_tag=CCO57_01690 NZ_NPMC01000001.1 Protein Homology CDS 330124 332958 . + 0 ID=cds-WP_001563101.1;Parent=gene-CCO57_RS01690;Dbxref=GenBank:WP_001563101.1;Name=WP_001563101.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=CCO57_RS01690;product=isoleucine--tRNA ligase;protein_id=WP_001563101.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 332958 333458 . + . ID=gene-CCO57_RS01695;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CCO57_RS01695;old_locus_tag=CCO57_01695 NZ_NPMC01000001.1 Protein Homology CDS 332958 333458 . + 0 ID=cds-WP_000042736.1;Parent=gene-CCO57_RS01695;Dbxref=GenBank:WP_000042736.1;Name=WP_000042736.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=CCO57_RS01695;product=signal peptidase II;protein_id=WP_000042736.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 333613 334062 . + . ID=gene-CCO57_RS01700;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=CCO57_RS01700;old_locus_tag=CCO57_01700 NZ_NPMC01000001.1 Protein Homology CDS 333613 334062 . + 0 ID=cds-WP_000047269.1;Parent=gene-CCO57_RS01700;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=CCO57_RS01700;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 334065 335015 . + . ID=gene-CCO57_RS01705;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=CCO57_RS01705;old_locus_tag=CCO57_01705 NZ_NPMC01000001.1 Protein Homology CDS 334065 335015 . + 0 ID=cds-WP_001166421.1;Parent=gene-CCO57_RS01705;Dbxref=GenBank:WP_001166421.1;Name=WP_001166421.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=CCO57_RS01705;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166421.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 335215 336417 . + . ID=gene-CCO57_RS01710;Name=CCO57_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01710;old_locus_tag=CCO57_01710 NZ_NPMC01000001.1 Protein Homology CDS 335215 336417 . + 0 ID=cds-WP_094914787.1;Parent=gene-CCO57_RS01710;Dbxref=GenBank:WP_094914787.1;Name=WP_094914787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=CCO57_RS01710;product=XAC2610-related protein;protein_id=WP_094914787.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 336433 337353 . + . ID=gene-CCO57_RS01715;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CCO57_RS01715;old_locus_tag=CCO57_01715 NZ_NPMC01000001.1 Protein Homology CDS 336433 337353 . + 0 ID=cds-WP_094914788.1;Parent=gene-CCO57_RS01715;Dbxref=GenBank:WP_094914788.1;Name=WP_094914788.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=CCO57_RS01715;product=ribonucleoside hydrolase RihC;protein_id=WP_094914788.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 337375 338061 . - . ID=gene-CCO57_RS01720;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=CCO57_RS01720;old_locus_tag=CCO57_01720 NZ_NPMC01000001.1 Protein Homology CDS 337375 338061 . - 0 ID=cds-WP_000377415.1;Parent=gene-CCO57_RS01720;Dbxref=GenBank:WP_000377415.1;Name=WP_000377415.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=CCO57_RS01720;product=citrate response regulator transcription factor CitB;protein_id=WP_000377415.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 338063 339682 . - . ID=gene-CCO57_RS01725;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=CCO57_RS01725;old_locus_tag=CCO57_01725 NZ_NPMC01000001.1 Protein Homology CDS 338063 339682 . - 0 ID=cds-WP_001563099.1;Parent=gene-CCO57_RS01725;Dbxref=GenBank:WP_001563099.1;Name=WP_001563099.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=CCO57_RS01725;product=citrate sensor histidine kinase CitA;protein_id=WP_001563099.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 339817 341118 . - . ID=gene-CCO57_RS01730;Name=CCO57_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01730;old_locus_tag=CCO57_01730 NZ_NPMC01000001.1 Protein Homology CDS 339817 341118 . - 0 ID=cds-WP_052904898.1;Parent=gene-CCO57_RS01730;Dbxref=GenBank:WP_052904898.1;Name=WP_052904898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO57_RS01730;product=oxalacetate decarboxylase subunit beta;protein_id=WP_052904898.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 341131 342906 . - . ID=gene-CCO57_RS01735;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO57_RS01735;old_locus_tag=CCO57_01735 NZ_NPMC01000001.1 Protein Homology CDS 341131 342906 . - 0 ID=cds-WP_052942957.1;Parent=gene-CCO57_RS01735;Dbxref=GenBank:WP_052942957.1;Name=WP_052942957.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO57_RS01735;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_052942957.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 342922 343161 . - . ID=gene-CCO57_RS01740;Name=CCO57_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01740;old_locus_tag=CCO57_01740 NZ_NPMC01000001.1 Protein Homology CDS 342922 343161 . - 0 ID=cds-WP_001001155.1;Parent=gene-CCO57_RS01740;Dbxref=GenBank:WP_001001155.1;Name=WP_001001155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010836018.1;locus_tag=CCO57_RS01740;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001001155.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 343320 344660 . - . ID=gene-CCO57_RS01745;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=CCO57_RS01745;old_locus_tag=CCO57_01745 NZ_NPMC01000001.1 Protein Homology CDS 343320 344660 . - 0 ID=cds-WP_024797394.1;Parent=gene-CCO57_RS01745;Dbxref=GenBank:WP_024797394.1;Name=WP_024797394.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=CCO57_RS01745;product=citrate/sodium symporter CitS;protein_id=WP_024797394.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 344905 345948 . + . ID=gene-CCO57_RS01750;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO57_RS01750;old_locus_tag=CCO57_01750 NZ_NPMC01000001.1 Protein Homology CDS 344905 345948 . + 0 ID=cds-WP_072102275.1;Parent=gene-CCO57_RS01750;Dbxref=GenBank:WP_072102275.1;Name=WP_072102275.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=CCO57_RS01750;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_072102275.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 345978 346271 . + . ID=gene-CCO57_RS01755;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO57_RS01755;old_locus_tag=CCO57_01755 NZ_NPMC01000001.1 Protein Homology CDS 345978 346271 . + 0 ID=cds-WP_000691461.1;Parent=gene-CCO57_RS01755;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=CCO57_RS01755;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 346268 347137 . + . ID=gene-CCO57_RS01760;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO57_RS01760;old_locus_tag=CCO57_01760 NZ_NPMC01000001.1 Protein Homology CDS 346268 347137 . + 0 ID=cds-WP_023232763.1;Parent=gene-CCO57_RS01760;Dbxref=GenBank:WP_023232763.1;Name=WP_023232763.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=CCO57_RS01760;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_023232763.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 347148 348668 . + . ID=gene-CCO57_RS01765;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO57_RS01765;old_locus_tag=CCO57_01765 NZ_NPMC01000001.1 Protein Homology CDS 347148 348668 . + 0 ID=cds-WP_023229953.1;Parent=gene-CCO57_RS01765;Dbxref=GenBank:WP_023229953.1;Name=WP_023229953.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=CCO57_RS01765;product=citrate lyase subunit alpha;protein_id=WP_023229953.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 348668 349219 . + . ID=gene-CCO57_RS01770;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO57_RS01770;old_locus_tag=CCO57_01770 NZ_NPMC01000001.1 Protein Homology CDS 348668 349219 . + 0 ID=cds-WP_000679050.1;Parent=gene-CCO57_RS01770;Dbxref=GenBank:WP_000679050.1;Name=WP_000679050.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=CCO57_RS01770;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000679050.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 349197 350105 . + . ID=gene-CCO57_RS01775;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO57_RS01775;old_locus_tag=CCO57_01775 NZ_NPMC01000001.1 Protein Homology CDS 349197 350105 . + 0 ID=cds-WP_001103238.1;Parent=gene-CCO57_RS01775;Dbxref=GenBank:WP_001103238.1;Name=WP_001103238.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=CCO57_RS01775;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_001103238.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 350285 351106 . + . ID=gene-CCO57_RS01780;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CCO57_RS01780;old_locus_tag=CCO57_01780 NZ_NPMC01000001.1 Protein Homology CDS 350285 351106 . + 0 ID=cds-WP_031602112.1;Parent=gene-CCO57_RS01780;Dbxref=GenBank:WP_031602112.1;Name=WP_031602112.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=CCO57_RS01780;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_031602112.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 351233 351397 . - . ID=gene-CCO57_RS24280;Name=CCO57_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24280 NZ_NPMC01000001.1 GeneMarkS-2+ CDS 351233 351397 . - 0 ID=cds-WP_001527307.1;Parent=gene-CCO57_RS24280;Dbxref=GenBank:WP_001527307.1;Name=WP_001527307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24280;product=hypothetical protein;protein_id=WP_001527307.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 352147 353295 . + . ID=gene-CCO57_RS01790;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=CCO57_RS01790;old_locus_tag=CCO57_01790 NZ_NPMC01000001.1 Protein Homology CDS 352147 353295 . + 0 ID=cds-WP_000597273.1;Parent=gene-CCO57_RS01790;Dbxref=GenBank:WP_000597273.1;Name=WP_000597273.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=CCO57_RS01790;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597273.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 353314 356541 . + . ID=gene-CCO57_RS01795;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CCO57_RS01795;old_locus_tag=CCO57_01795 NZ_NPMC01000001.1 Protein Homology CDS 353314 356541 . + 0 ID=cds-WP_001126310.1;Parent=gene-CCO57_RS01795;Dbxref=GenBank:WP_001126310.1;Name=WP_001126310.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=CCO57_RS01795;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126310.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 356815 357210 . + . ID=gene-CCO57_RS01800;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=CCO57_RS01800;old_locus_tag=CCO57_01800 NZ_NPMC01000001.1 Protein Homology CDS 356815 357210 . + 0 ID=cds-WP_000333324.1;Parent=gene-CCO57_RS01800;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=CCO57_RS01800;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 357287 357883 . - . ID=gene-CCO57_RS01805;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=CCO57_RS01805;old_locus_tag=CCO57_01805 NZ_NPMC01000001.1 Protein Homology CDS 357287 357883 . - 0 ID=cds-WP_000122863.1;Parent=gene-CCO57_RS01805;Dbxref=GenBank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=CCO57_RS01805;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 357993 358778 . - . ID=gene-CCO57_RS01810;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=CCO57_RS01810;old_locus_tag=CCO57_01810 NZ_NPMC01000001.1 Protein Homology CDS 357993 358778 . - 0 ID=cds-WP_000004385.1;Parent=gene-CCO57_RS01810;Dbxref=GenBank:WP_000004385.1;Name=WP_000004385.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO57_RS01810;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004385.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 358832 360385 . - . ID=gene-CCO57_RS01815;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=CCO57_RS01815;old_locus_tag=CCO57_01815 NZ_NPMC01000001.1 Protein Homology CDS 358832 360385 . - 0 ID=cds-WP_023137176.1;Parent=gene-CCO57_RS01815;Dbxref=GenBank:WP_023137176.1;Name=WP_023137176.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=CCO57_RS01815;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_023137176.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 360448 361665 . - . ID=gene-CCO57_RS01820;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=CCO57_RS01820;old_locus_tag=CCO57_01820 NZ_NPMC01000001.1 Protein Homology CDS 360448 361665 . - 0 ID=cds-WP_001016212.1;Parent=gene-CCO57_RS01820;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=CCO57_RS01820;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 361777 362919 . - . ID=gene-CCO57_RS01825;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=CCO57_RS01825;old_locus_tag=CCO57_01825 NZ_NPMC01000001.1 Protein Homology CDS 361777 362919 . - 0 ID=cds-WP_000347134.1;Parent=gene-CCO57_RS01825;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=CCO57_RS01825;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 362954 364471 . - . ID=gene-CCO57_RS01830;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=CCO57_RS01830;old_locus_tag=CCO57_01830 NZ_NPMC01000001.1 Protein Homology CDS 362954 364471 . - 0 ID=cds-WP_000787073.1;Parent=gene-CCO57_RS01830;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=CCO57_RS01830;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 364952 365722 . + . ID=gene-CCO57_RS01840;Name=CCO57_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01840;old_locus_tag=CCO57_01840 NZ_NPMC01000001.1 Protein Homology CDS 364952 365722 . + 0 ID=cds-WP_000692185.1;Parent=gene-CCO57_RS01840;Dbxref=GenBank:WP_000692185.1;Name=WP_000692185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=CCO57_RS01840;product=electron transfer flavoprotein FixA;protein_id=WP_000692185.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 365738 366679 . + . ID=gene-CCO57_RS01845;Name=CCO57_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01845;old_locus_tag=CCO57_01845 NZ_NPMC01000001.1 Protein Homology CDS 365738 366679 . + 0 ID=cds-WP_001032188.1;Parent=gene-CCO57_RS01845;Dbxref=GenBank:WP_001032188.1;Name=WP_001032188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=CCO57_RS01845;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032188.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 366729 368015 . + . ID=gene-CCO57_RS01850;Name=CCO57_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01850;old_locus_tag=CCO57_01850 NZ_NPMC01000001.1 Protein Homology CDS 366729 368015 . + 0 ID=cds-WP_001287767.1;Parent=gene-CCO57_RS01850;Dbxref=GenBank:WP_001287767.1;Name=WP_001287767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=CCO57_RS01850;product=FAD-dependent oxidoreductase;protein_id=WP_001287767.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 368012 368299 . + . ID=gene-CCO57_RS01855;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=CCO57_RS01855;old_locus_tag=CCO57_01855 NZ_NPMC01000001.1 Protein Homology CDS 368012 368299 . + 0 ID=cds-WP_000203736.1;Parent=gene-CCO57_RS01855;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=CCO57_RS01855;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 368447 369787 . + . ID=gene-CCO57_RS01860;Name=CCO57_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01860;old_locus_tag=CCO57_01860 NZ_NPMC01000001.1 Protein Homology CDS 368447 369787 . + 0 ID=cds-WP_001136169.1;Parent=gene-CCO57_RS01860;Dbxref=GenBank:WP_001136169.1;Name=WP_001136169.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=CCO57_RS01860;product=MFS transporter;protein_id=WP_001136169.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 369876 370106 . + . ID=gene-CCO57_RS01865;Name=CCO57_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01865;old_locus_tag=CCO57_01865 NZ_NPMC01000001.1 Protein Homology CDS 369876 370106 . + 0 ID=cds-WP_001172089.1;Parent=gene-CCO57_RS01865;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=CCO57_RS01865;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 370406 370822 . + . ID=gene-CCO57_RS01870;Name=CCO57_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01870;old_locus_tag=CCO57_01870 NZ_NPMC01000001.1 Protein Homology CDS 370406 370822 . + 0 ID=cds-WP_161976238.1;Parent=gene-CCO57_RS01870;Dbxref=GenBank:WP_161976238.1;Name=WP_161976238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=CCO57_RS01870;product=hypothetical protein;protein_id=WP_161976238.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 371046 371336 . - . ID=gene-CCO57_RS01875;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=CCO57_RS01875;old_locus_tag=CCO57_01875 NZ_NPMC01000001.1 Protein Homology CDS 371046 371336 . - 0 ID=cds-WP_000710534.1;Parent=gene-CCO57_RS01875;Dbxref=GenBank:WP_000710534.1;Name=WP_000710534.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=CCO57_RS01875;product=DUF1471 family virulence protein SrfN;protein_id=WP_000710534.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 372235 374124 . + . ID=gene-CCO57_RS01890;Name=CCO57_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01890;old_locus_tag=CCO57_01890 NZ_NPMC01000001.1 Protein Homology CDS 372235 374124 . + 0 ID=cds-WP_063917057.1;Parent=gene-CCO57_RS01890;Dbxref=GenBank:WP_063917057.1;Name=WP_063917057.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=CCO57_RS01890;product=sulfatase-like hydrolase/transferase;protein_id=WP_063917057.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 374476 374556 . - . ID=gene-CCO57_RS24900;Name=CCO57_RS24900;end_range=374556,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24900;partial=true;pseudo=true NZ_NPMC01000001.1 Protein Homology CDS 374476 374556 . - 0 ID=cds-CCO57_RS24900;Parent=gene-CCO57_RS24900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=374556,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO57_RS24900;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 374678 375208 . + . ID=gene-CCO57_RS01905;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=CCO57_RS01905;old_locus_tag=CCO57_01905 NZ_NPMC01000001.1 Protein Homology CDS 374678 375208 . + 0 ID=cds-WP_094914789.1;Parent=gene-CCO57_RS01905;Dbxref=GenBank:WP_094914789.1;Name=WP_094914789.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=CCO57_RS01905;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_094914789.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 375201 377063 . + . ID=gene-CCO57_RS01910;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=CCO57_RS01910;old_locus_tag=CCO57_01910 NZ_NPMC01000001.1 Protein Homology CDS 375201 377063 . + 0 ID=cds-WP_000377164.1;Parent=gene-CCO57_RS01910;Dbxref=GenBank:WP_000377164.1;Name=WP_000377164.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=CCO57_RS01910;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377164.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 377262 377741 . + . ID=gene-CCO57_RS01915;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=CCO57_RS01915;old_locus_tag=CCO57_01915 NZ_NPMC01000001.1 Protein Homology CDS 377262 377741 . + 0 ID=cds-WP_000624379.1;Parent=gene-CCO57_RS01915;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=CCO57_RS01915;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 377892 378740 . - . ID=gene-CCO57_RS01920;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=CCO57_RS01920;old_locus_tag=CCO57_01920 NZ_NPMC01000001.1 Protein Homology CDS 377892 378740 . - 0 ID=cds-WP_000257211.1;Parent=gene-CCO57_RS01920;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=CCO57_RS01920;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 378751 379128 . - . ID=gene-CCO57_RS01925;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=CCO57_RS01925;old_locus_tag=CCO57_01925 NZ_NPMC01000001.1 Protein Homology CDS 378751 379128 . - 0 ID=cds-WP_000610894.1;Parent=gene-CCO57_RS01925;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=CCO57_RS01925;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 379131 379952 . - . ID=gene-CCO57_RS01930;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CCO57_RS01930;old_locus_tag=CCO57_01930 NZ_NPMC01000001.1 Protein Homology CDS 379131 379952 . - 0 ID=cds-WP_001065397.1;Parent=gene-CCO57_RS01930;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=CCO57_RS01930;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 379949 380938 . - . ID=gene-CCO57_RS01935;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CCO57_RS01935;old_locus_tag=CCO57_01935 NZ_NPMC01000001.1 Protein Homology CDS 379949 380938 . - 0 ID=cds-WP_000092999.1;Parent=gene-CCO57_RS01935;Dbxref=GenBank:WP_000092999.1;Name=WP_000092999.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=CCO57_RS01935;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000092999.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 380938 382224 . - . ID=gene-CCO57_RS01940;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=CCO57_RS01940;old_locus_tag=CCO57_01940 NZ_NPMC01000001.1 Protein Homology CDS 380938 382224 . - 0 ID=cds-WP_000800482.1;Parent=gene-CCO57_RS01940;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=CCO57_RS01940;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 382278 384638 . - . ID=gene-CCO57_RS01945;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=CCO57_RS01945;old_locus_tag=CCO57_01945 NZ_NPMC01000001.1 Protein Homology CDS 382278 384638 . - 0 ID=cds-WP_000746120.1;Parent=gene-CCO57_RS01945;Dbxref=GenBank:WP_000746120.1;Name=WP_000746120.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=CCO57_RS01945;product=LPS assembly protein LptD;protein_id=WP_000746120.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 384892 385704 . + . ID=gene-CCO57_RS01950;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=CCO57_RS01950;old_locus_tag=CCO57_01950 NZ_NPMC01000001.1 Protein Homology CDS 384892 385704 . + 0 ID=cds-WP_001200595.1;Parent=gene-CCO57_RS01950;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=CCO57_RS01950;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 385799 386458 . - . ID=gene-CCO57_RS01955;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=CCO57_RS01955;old_locus_tag=CCO57_01955 NZ_NPMC01000001.1 Protein Homology CDS 385799 386458 . - 0 ID=cds-WP_000525196.1;Parent=gene-CCO57_RS01955;Dbxref=GenBank:WP_000525196.1;Name=WP_000525196.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=CCO57_RS01955;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525196.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 386470 389376 . - . ID=gene-CCO57_RS01960;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=CCO57_RS01960;old_locus_tag=CCO57_01960 NZ_NPMC01000001.1 Protein Homology CDS 386470 389376 . - 0 ID=cds-WP_001116978.1;Parent=gene-CCO57_RS01960;Dbxref=GenBank:WP_001116978.1;Name=WP_001116978.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=CCO57_RS01960;product=RNA polymerase-associated protein RapA;protein_id=WP_001116978.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 389550 391901 . - . ID=gene-CCO57_RS01965;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=CCO57_RS01965;old_locus_tag=CCO57_01965 NZ_NPMC01000001.1 Protein Homology CDS 389550 391901 . - 0 ID=cds-WP_000035717.1;Parent=gene-CCO57_RS01965;Dbxref=GenBank:WP_000035717.1;Name=WP_000035717.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=CCO57_RS01965;product=DNA polymerase II;protein_id=WP_000035717.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 391945 392565 . - . ID=gene-CCO57_RS01970;Name=CCO57_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01970;old_locus_tag=CCO57_01970 NZ_NPMC01000001.1 Protein Homology CDS 391945 392565 . - 0 ID=cds-WP_001628131.1;Parent=gene-CCO57_RS01970;Dbxref=GenBank:WP_001628131.1;Name=WP_001628131.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=CCO57_RS01970;product=YdcF family protein;protein_id=WP_001628131.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 393083 393502 . + . ID=gene-CCO57_RS01980;Name=CCO57_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS01980;old_locus_tag=CCO57_01980 NZ_NPMC01000001.1 Protein Homology CDS 393083 393502 . + 0 ID=cds-WP_001102192.1;Parent=gene-CCO57_RS01980;Dbxref=GenBank:WP_001102192.1;Name=WP_001102192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=CCO57_RS01980;product=DUF4751 family protein;protein_id=WP_001102192.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 393508 394203 . - . ID=gene-CCO57_RS01985;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO57_RS01985;old_locus_tag=CCO57_01985 NZ_NPMC01000001.1 Protein Homology CDS 393508 394203 . - 0 ID=cds-WP_000888685.1;Parent=gene-CCO57_RS01985;Dbxref=GenBank:WP_000888685.1;Name=WP_000888685.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=CCO57_RS01985;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888685.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 394344 395846 . - . ID=gene-CCO57_RS01990;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=CCO57_RS01990;old_locus_tag=CCO57_01990 NZ_NPMC01000001.1 Protein Homology CDS 394344 395846 . - 0 ID=cds-WP_086812790.1;Parent=gene-CCO57_RS01990;Dbxref=GenBank:WP_086812790.1;Name=WP_086812790.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=CCO57_RS01990;product=L-arabinose isomerase;protein_id=WP_086812790.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 395857 397566 . - . ID=gene-CCO57_RS01995;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=CCO57_RS01995;old_locus_tag=CCO57_01995 NZ_NPMC01000001.1 Protein Homology CDS 395857 397566 . - 0 ID=cds-WP_086776703.1;Parent=gene-CCO57_RS01995;Dbxref=GenBank:WP_086776703.1;Name=WP_086776703.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=CCO57_RS01995;product=ribulokinase;protein_id=WP_086776703.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 397907 398752 . + . ID=gene-CCO57_RS02000;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=CCO57_RS02000;old_locus_tag=CCO57_02000 NZ_NPMC01000001.1 Protein Homology CDS 397907 398752 . + 0 ID=cds-WP_000852385.1;Parent=gene-CCO57_RS02000;Dbxref=GenBank:WP_000852385.1;Name=WP_000852385.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=CCO57_RS02000;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852385.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 398871 399638 . + . ID=gene-CCO57_RS02005;Name=CCO57_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02005;old_locus_tag=CCO57_02005 NZ_NPMC01000001.1 Protein Homology CDS 398871 399638 . + 0 ID=cds-WP_001148371.1;Parent=gene-CCO57_RS02005;Dbxref=GenBank:WP_001148371.1;Name=WP_001148371.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=CCO57_RS02005;product=DedA family protein;protein_id=WP_001148371.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 399677 400384 . - . ID=gene-CCO57_RS02010;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=CCO57_RS02010;old_locus_tag=CCO57_02010 NZ_NPMC01000001.1 Protein Homology CDS 399677 400384 . - 0 ID=cds-WP_023220757.1;Parent=gene-CCO57_RS02010;Dbxref=GenBank:WP_023220757.1;Name=WP_023220757.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=CCO57_RS02010;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_023220757.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 400368 401978 . - . ID=gene-CCO57_RS02015;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=CCO57_RS02015;old_locus_tag=CCO57_02015 NZ_NPMC01000001.1 Protein Homology CDS 400368 401978 . - 0 ID=cds-WP_000235636.1;Parent=gene-CCO57_RS02015;Dbxref=GenBank:WP_000235636.1;Name=WP_000235636.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=CCO57_RS02015;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235636.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 401954 402937 . - . ID=gene-CCO57_RS02020;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=CCO57_RS02020;old_locus_tag=CCO57_02020 NZ_NPMC01000001.1 Protein Homology CDS 401954 402937 . - 0 ID=cds-WP_086776704.1;Parent=gene-CCO57_RS02020;Dbxref=GenBank:WP_086776704.1;Name=WP_086776704.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=CCO57_RS02020;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_086776704.1;transl_table=11 NZ_NPMC01000001.1 cmsearch riboswitch 402969 403068 . - . ID=id-NZ_NPMC01000001.1:402969..403068;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMC01000001.1 RefSeq gene 403116 404774 . - . ID=gene-CCO57_RS02025;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=CCO57_RS02025;old_locus_tag=CCO57_02025 NZ_NPMC01000001.1 Protein Homology CDS 403116 404774 . - 0 ID=cds-WP_001139030.1;Parent=gene-CCO57_RS02025;Dbxref=GenBank:WP_001139030.1;Name=WP_001139030.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=CCO57_RS02025;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139030.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 404867 404989 . + . ID=gene-CCO57_RS02030;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=CCO57_RS02030;old_locus_tag=CCO57_02030 NZ_NPMC01000001.1 Protein Homology CDS 404867 404989 . + 0 ID=cds-WP_001248755.1;Parent=gene-CCO57_RS02030;Dbxref=GenBank:WP_001248755.1;Name=WP_001248755.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=CCO57_RS02030;product=glucose uptake inhibitor SgrT;protein_id=WP_001248755.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 405325 405930 . - . ID=gene-CCO57_RS02035;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO57_RS02035;old_locus_tag=CCO57_02035 NZ_NPMC01000001.1 Protein Homology CDS 405325 405930 . - 0 ID=cds-WP_000818264.1;Parent=gene-CCO57_RS02035;Dbxref=GenBank:WP_000818264.1;Name=WP_000818264.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=CCO57_RS02035;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818264.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 405941 407341 . - . ID=gene-CCO57_RS02040;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO57_RS02040;old_locus_tag=CCO57_02040 NZ_NPMC01000001.1 Protein Homology CDS 405941 407341 . - 0 ID=cds-WP_001140632.1;Parent=gene-CCO57_RS02040;Dbxref=GenBank:WP_001140632.1;Name=WP_001140632.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=CCO57_RS02040;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140632.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 407344 408435 . - . ID=gene-CCO57_RS02045;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CCO57_RS02045;old_locus_tag=CCO57_02045 NZ_NPMC01000001.1 Protein Homology CDS 407344 408435 . - 0 ID=cds-WP_000042326.1;Parent=gene-CCO57_RS02045;Dbxref=GenBank:WP_000042326.1;Name=WP_000042326.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=CCO57_RS02045;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042326.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 408435 410006 . - . ID=gene-CCO57_RS02050;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=CCO57_RS02050;old_locus_tag=CCO57_02050 NZ_NPMC01000001.1 Protein Homology CDS 408435 410006 . - 0 ID=cds-WP_000082819.1;Parent=gene-CCO57_RS02050;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=CCO57_RS02050;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 410094 410180 . - . ID=gene-CCO57_RS02055;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=CCO57_RS02055;old_locus_tag=CCO57_02055 NZ_NPMC01000001.1 Protein Homology CDS 410094 410180 . - 0 ID=cds-WP_001575587.1;Parent=gene-CCO57_RS02055;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=CCO57_RS02055;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 410837 411781 . + . ID=gene-CCO57_RS02060;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=CCO57_RS02060;old_locus_tag=CCO57_02060 NZ_NPMC01000001.1 Protein Homology CDS 410837 411781 . + 0 ID=cds-WP_001115419.1;Parent=gene-CCO57_RS02060;Dbxref=GenBank:WP_001115419.1;Name=WP_001115419.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=CCO57_RS02060;product=transcriptional regulator LeuO;protein_id=WP_001115419.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 412103 413827 . + . ID=gene-CCO57_RS02065;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=CCO57_RS02065;old_locus_tag=CCO57_02065 NZ_NPMC01000001.1 Protein Homology CDS 412103 413827 . + 0 ID=cds-WP_000425624.1;Parent=gene-CCO57_RS02065;Dbxref=GenBank:WP_000425624.1;Name=WP_000425624.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=CCO57_RS02065;product=acetolactate synthase 3 large subunit;protein_id=WP_000425624.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 413830 414321 . + . ID=gene-CCO57_RS02070;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO57_RS02070;old_locus_tag=CCO57_02070 NZ_NPMC01000001.1 Protein Homology CDS 413830 414321 . + 0 ID=cds-WP_023213699.1;Parent=gene-CCO57_RS02070;Dbxref=GenBank:WP_023213699.1;Name=WP_023213699.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=CCO57_RS02070;product=acetolactate synthase small subunit;protein_id=WP_023213699.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 414605 415609 . + . ID=gene-CCO57_RS02075;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=CCO57_RS02075;old_locus_tag=CCO57_02075 NZ_NPMC01000001.1 Protein Homology CDS 414605 415609 . + 0 ID=cds-WP_000762406.1;Parent=gene-CCO57_RS02075;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=CCO57_RS02075;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 416215 416673 . + . ID=gene-CCO57_RS02080;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CCO57_RS02080;old_locus_tag=CCO57_02080 NZ_NPMC01000001.1 Protein Homology CDS 416215 416673 . + 0 ID=cds-WP_000488294.1;Parent=gene-CCO57_RS02080;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=CCO57_RS02080;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 416675 417616 . + . ID=gene-CCO57_RS02085;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CCO57_RS02085;old_locus_tag=CCO57_02085 NZ_NPMC01000001.1 Protein Homology CDS 416675 417616 . + 0 ID=cds-WP_000970444.1;Parent=gene-CCO57_RS02085;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=CCO57_RS02085;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 417613 417978 . + . ID=gene-CCO57_RS02090;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CCO57_RS02090;old_locus_tag=CCO57_02090 NZ_NPMC01000001.1 Protein Homology CDS 417613 417978 . + 0 ID=cds-WP_000625651.1;Parent=gene-CCO57_RS02090;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=CCO57_RS02090;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 417994 419760 . + . ID=gene-CCO57_RS02095;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO57_RS02095;old_locus_tag=CCO57_02095 NZ_NPMC01000001.1 Protein Homology CDS 417994 419760 . + 0 ID=cds-WP_000642236.1;Parent=gene-CCO57_RS02095;Dbxref=GenBank:WP_000642236.1;Name=WP_000642236.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=CCO57_RS02095;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642236.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 419747 421234 . + . ID=gene-CCO57_RS02100;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=CCO57_RS02100;old_locus_tag=CCO57_02100 NZ_NPMC01000001.1 Protein Homology CDS 419747 421234 . + 0 ID=cds-WP_086776706.1;Parent=gene-CCO57_RS02100;Dbxref=GenBank:WP_086776706.1;Name=WP_086776706.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=CCO57_RS02100;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_086776706.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 421231 422589 . + . ID=gene-CCO57_RS02105;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=CCO57_RS02105;old_locus_tag=CCO57_02105 NZ_NPMC01000001.1 Protein Homology CDS 421231 422589 . + 0 ID=cds-WP_000626639.1;Parent=gene-CCO57_RS02105;Dbxref=GenBank:WP_000626639.1;Name=WP_000626639.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=CCO57_RS02105;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626639.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 422583 423665 . + . ID=gene-CCO57_RS02110;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CCO57_RS02110;old_locus_tag=CCO57_02110 NZ_NPMC01000001.1 Protein Homology CDS 422583 423665 . + 0 ID=cds-WP_000964138.1;Parent=gene-CCO57_RS02110;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=CCO57_RS02110;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 423668 424984 . + . ID=gene-CCO57_RS02115;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CCO57_RS02115;old_locus_tag=CCO57_02115 NZ_NPMC01000001.1 Protein Homology CDS 423668 424984 . + 0 ID=cds-WP_000796443.1;Parent=gene-CCO57_RS02115;Dbxref=GenBank:WP_000796443.1;Name=WP_000796443.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=CCO57_RS02115;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796443.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 424984 426228 . + . ID=gene-CCO57_RS02120;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CCO57_RS02120;old_locus_tag=CCO57_02120 NZ_NPMC01000001.1 Protein Homology CDS 424984 426228 . + 0 ID=cds-WP_001239803.1;Parent=gene-CCO57_RS02120;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=CCO57_RS02120;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 426225 427292 . + . ID=gene-CCO57_RS02125;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CCO57_RS02125;old_locus_tag=CCO57_02125 NZ_NPMC01000001.1 Protein Homology CDS 426225 427292 . + 0 ID=cds-WP_000016613.1;Parent=gene-CCO57_RS02125;Dbxref=GenBank:WP_000016613.1;Name=WP_000016613.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=CCO57_RS02125;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016613.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 427411 428886 . + . ID=gene-CCO57_RS02130;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CCO57_RS02130;old_locus_tag=CCO57_02130 NZ_NPMC01000001.1 Protein Homology CDS 427411 428886 . + 0 ID=cds-WP_001096070.1;Parent=gene-CCO57_RS02130;Dbxref=GenBank:WP_001096070.1;Name=WP_001096070.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=CCO57_RS02130;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096070.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 428879 429799 . + . ID=gene-CCO57_RS02135;Name=CCO57_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02135;old_locus_tag=CCO57_02135 NZ_NPMC01000001.1 Protein Homology CDS 428879 429799 . + 0 ID=cds-WP_023231163.1;Parent=gene-CCO57_RS02135;Dbxref=GenBank:WP_023231163.1;Name=WP_023231163.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=CCO57_RS02135;product=D-alanine--D-alanine ligase;protein_id=WP_023231163.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 429801 430631 . + . ID=gene-CCO57_RS02140;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=CCO57_RS02140;old_locus_tag=CCO57_02140 NZ_NPMC01000001.1 Protein Homology CDS 429801 430631 . + 0 ID=cds-WP_000075728.1;Parent=gene-CCO57_RS02140;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=CCO57_RS02140;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 430628 431890 . + . ID=gene-CCO57_RS02145;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CCO57_RS02145;old_locus_tag=CCO57_02145 NZ_NPMC01000001.1 Protein Homology CDS 430628 431890 . + 0 ID=cds-WP_000588463.1;Parent=gene-CCO57_RS02145;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=CCO57_RS02145;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 431952 433103 . + . ID=gene-CCO57_RS02150;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CCO57_RS02150;old_locus_tag=CCO57_02150 NZ_NPMC01000001.1 Protein Homology CDS 431952 433103 . + 0 ID=cds-WP_000462785.1;Parent=gene-CCO57_RS02150;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=CCO57_RS02150;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 433204 434121 . + . ID=gene-CCO57_RS02155;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=CCO57_RS02155;old_locus_tag=CCO57_02155 NZ_NPMC01000001.1 Protein Homology CDS 433204 434121 . + 0 ID=cds-WP_000595487.1;Parent=gene-CCO57_RS02155;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=CCO57_RS02155;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 434400 434897 . + . ID=gene-CCO57_RS02160;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=CCO57_RS02160;old_locus_tag=CCO57_02160 NZ_NPMC01000001.1 Protein Homology CDS 434400 434897 . + 0 ID=cds-WP_000014336.1;Parent=gene-CCO57_RS02160;Dbxref=GenBank:WP_000014336.1;Name=WP_000014336.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=CCO57_RS02160;product=secA translation cis-regulator SecM;protein_id=WP_000014336.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 434959 437664 . + . ID=gene-CCO57_RS02165;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CCO57_RS02165;old_locus_tag=CCO57_02165 NZ_NPMC01000001.1 Protein Homology CDS 434959 437664 . + 0 ID=cds-WP_000905755.1;Parent=gene-CCO57_RS02165;Dbxref=GenBank:WP_000905755.1;Name=WP_000905755.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=CCO57_RS02165;product=preprotein translocase subunit SecA;protein_id=WP_000905755.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 437816 438211 . + . ID=gene-CCO57_RS02170;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=CCO57_RS02170;old_locus_tag=CCO57_02170 NZ_NPMC01000001.1 Protein Homology CDS 437816 438211 . + 0 ID=cds-WP_086776707.1;Parent=gene-CCO57_RS02170;Dbxref=GenBank:WP_086776707.1;Name=WP_086776707.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=CCO57_RS02170;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_086776707.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 438245 438385 . - . ID=gene-CCO57_RS24480;Name=CCO57_RS24480;end_range=438385,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24480;old_locus_tag=CCO57_02175;partial=true;pseudo=true NZ_NPMC01000001.1 Protein Homology CDS 438245 438385 . - 0 ID=cds-CCO57_RS24480;Parent=gene-CCO57_RS24480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=438385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=CCO57_RS24480;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 438416 438529 . + . ID=gene-CCO57_RS24905;Name=CCO57_RS24905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24905;old_locus_tag=CCO57_02180;partial=true;pseudo=true;start_range=.,438416 NZ_NPMC01000001.1 Protein Homology CDS 438416 438529 . + 0 ID=cds-CCO57_RS24905;Parent=gene-CCO57_RS24905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=CCO57_RS24905;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,438416;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 438526 438717 . - . ID=gene-CCO57_RS02185;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=CCO57_RS02185;old_locus_tag=CCO57_02185 NZ_NPMC01000001.1 Protein Homology CDS 438526 438717 . - 0 ID=cds-WP_001286419.1;Parent=gene-CCO57_RS02185;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=CCO57_RS02185;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 438727 439470 . - . ID=gene-CCO57_RS02190;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=CCO57_RS02190;old_locus_tag=CCO57_02190 NZ_NPMC01000001.1 Protein Homology CDS 438727 439470 . - 0 ID=cds-WP_000557441.1;Parent=gene-CCO57_RS02190;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=CCO57_RS02190;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 439470 440090 . - . ID=gene-CCO57_RS02195;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CCO57_RS02195;old_locus_tag=CCO57_02195 NZ_NPMC01000001.1 Protein Homology CDS 439470 440090 . - 0 ID=cds-WP_001270914.1;Parent=gene-CCO57_RS02195;Dbxref=GenBank:WP_001270914.1;Name=WP_001270914.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=CCO57_RS02195;product=dephospho-CoA kinase;protein_id=WP_001270914.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 440316 441359 . + . ID=gene-CCO57_RS02200;Name=CCO57_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02200;old_locus_tag=CCO57_02200 NZ_NPMC01000001.1 Protein Homology CDS 440316 441359 . + 0 ID=cds-WP_001217363.1;Parent=gene-CCO57_RS02200;Dbxref=GenBank:WP_001217363.1;Name=WP_001217363.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=CCO57_RS02200;product=GMP reductase;protein_id=WP_001217363.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 441390 442592 . - . ID=gene-CCO57_RS02205;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=CCO57_RS02205;old_locus_tag=CCO57_02205 NZ_NPMC01000001.1 Protein Homology CDS 441390 442592 . - 0 ID=cds-WP_000114112.1;Parent=gene-CCO57_RS02205;Dbxref=GenBank:WP_000114112.1;Name=WP_000114112.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=CCO57_RS02205;product=protein transport protein HofC;protein_id=WP_000114112.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 442582 443967 . - . ID=gene-CCO57_RS02210;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=CCO57_RS02210;old_locus_tag=CCO57_02210 NZ_NPMC01000001.1 Protein Homology CDS 442582 443967 . - 0 ID=cds-WP_000650588.1;Parent=gene-CCO57_RS02210;Dbxref=GenBank:WP_000650588.1;Name=WP_000650588.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=CCO57_RS02210;product=type II secretion system protein GspE;protein_id=WP_000650588.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 443977 444414 . - . ID=gene-CCO57_RS02215;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=CCO57_RS02215;old_locus_tag=CCO57_02215 NZ_NPMC01000001.1 Protein Homology CDS 443977 444414 . - 0 ID=cds-WP_000414986.1;Parent=gene-CCO57_RS02215;Dbxref=GenBank:WP_000414986.1;Name=WP_000414986.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=CCO57_RS02215;product=prepilin peptidase-dependent pilin;protein_id=WP_000414986.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 444636 445529 . - . ID=gene-CCO57_RS02225;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CCO57_RS02225;old_locus_tag=CCO57_02225 NZ_NPMC01000001.1 Protein Homology CDS 444636 445529 . - 0 ID=cds-WP_086776708.1;Parent=gene-CCO57_RS02225;Dbxref=GenBank:WP_086776708.1;Name=WP_086776708.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=CCO57_RS02225;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_086776708.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 445617 446180 . + . ID=gene-CCO57_RS02230;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=CCO57_RS02230;old_locus_tag=CCO57_02230 NZ_NPMC01000001.1 Protein Homology CDS 445617 446180 . + 0 ID=cds-WP_000936326.1;Parent=gene-CCO57_RS02230;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=CCO57_RS02230;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 446177 447031 . + . ID=gene-CCO57_RS02235;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=CCO57_RS02235;old_locus_tag=CCO57_02235 NZ_NPMC01000001.1 Protein Homology CDS 446177 447031 . + 0 ID=cds-WP_000172039.1;Parent=gene-CCO57_RS02235;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=CCO57_RS02235;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 447123 448073 . - . ID=gene-CCO57_RS02240;Name=CCO57_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02240;old_locus_tag=CCO57_02240 NZ_NPMC01000001.1 Protein Homology CDS 447123 448073 . - 0 ID=cds-WP_000024775.1;Parent=gene-CCO57_RS02240;Dbxref=GenBank:WP_000024775.1;Name=WP_000024775.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=CCO57_RS02240;product=glycoside hydrolase family 43 protein;protein_id=WP_000024775.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 448073 449479 . - . ID=gene-CCO57_RS02245;Name=CCO57_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02245;old_locus_tag=CCO57_02245 NZ_NPMC01000001.1 Protein Homology CDS 448073 449479 . - 0 ID=cds-WP_000357545.1;Parent=gene-CCO57_RS02245;Dbxref=GenBank:WP_000357545.1;Name=WP_000357545.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=CCO57_RS02245;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_000357545.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 449643 451016 . - . ID=gene-CCO57_RS02250;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=CCO57_RS02250;old_locus_tag=CCO57_02250 NZ_NPMC01000001.1 Protein Homology CDS 449643 451016 . - 0 ID=cds-WP_001539002.1;Parent=gene-CCO57_RS02250;Dbxref=GenBank:WP_001539002.1;Name=WP_001539002.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=CCO57_RS02250;product=aromatic amino acid transporter AroP;protein_id=WP_001539002.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 451579 452343 . + . ID=gene-CCO57_RS02255;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=CCO57_RS02255;old_locus_tag=CCO57_02255 NZ_NPMC01000001.1 Protein Homology CDS 451579 452343 . + 0 ID=cds-WP_000331771.1;Parent=gene-CCO57_RS02255;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=CCO57_RS02255;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 452503 455166 . + . ID=gene-CCO57_RS02260;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=CCO57_RS02260;old_locus_tag=CCO57_02260 NZ_NPMC01000001.1 Protein Homology CDS 452503 455166 . + 0 ID=cds-WP_023214751.1;Parent=gene-CCO57_RS02260;Dbxref=GenBank:WP_023214751.1;Name=WP_023214751.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=CCO57_RS02260;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_023214751.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 455181 457067 . + . ID=gene-CCO57_RS02265;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=CCO57_RS02265;old_locus_tag=CCO57_02265 NZ_NPMC01000001.1 Protein Homology CDS 455181 457067 . + 0 ID=cds-WP_094914790.1;Parent=gene-CCO57_RS02265;Dbxref=GenBank:WP_094914790.1;Name=WP_094914790.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=CCO57_RS02265;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_094914790.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 457269 458693 . + . ID=gene-CCO57_RS02270;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CCO57_RS02270;old_locus_tag=CCO57_02270 NZ_NPMC01000001.1 Protein Homology CDS 457269 458693 . + 0 ID=cds-WP_001529952.1;Parent=gene-CCO57_RS02270;Dbxref=GenBank:WP_001529952.1;Name=WP_001529952.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=CCO57_RS02270;product=dihydrolipoyl dehydrogenase;protein_id=WP_001529952.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 458982 459266 . + . ID=gene-CCO57_RS02275;Name=CCO57_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02275;old_locus_tag=CCO57_02275 NZ_NPMC01000001.1 Protein Homology CDS 458982 459266 . + 0 ID=cds-WP_000765363.1;Parent=gene-CCO57_RS02275;Dbxref=GenBank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=CCO57_RS02275;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 459304 460095 . - . ID=gene-CCO57_RS02280;Name=CCO57_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02280;old_locus_tag=CCO57_02280 NZ_NPMC01000001.1 Protein Homology CDS 459304 460095 . - 0 ID=cds-WP_000757447.1;Parent=gene-CCO57_RS02280;Dbxref=GenBank:WP_000757447.1;Name=WP_000757447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=CCO57_RS02280;product=DUF2950 family protein;protein_id=WP_000757447.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 460108 461703 . - . ID=gene-CCO57_RS02285;Name=CCO57_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02285;old_locus_tag=CCO57_02285 NZ_NPMC01000001.1 Protein Homology CDS 460108 461703 . - 0 ID=cds-WP_000174512.1;Parent=gene-CCO57_RS02285;Dbxref=GenBank:WP_000174512.1;Name=WP_000174512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=CCO57_RS02285;product=DUF3300 domain-containing protein;protein_id=WP_000174512.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 462092 464689 . + . ID=gene-CCO57_RS02290;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=CCO57_RS02290;old_locus_tag=CCO57_02290 NZ_NPMC01000001.1 Protein Homology CDS 462092 464689 . + 0 ID=cds-WP_000888965.1;Parent=gene-CCO57_RS02290;Dbxref=GenBank:WP_000888965.1;Name=WP_000888965.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459163.1;locus_tag=CCO57_RS02290;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_000888965.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 464878 465240 . + . ID=gene-CCO57_RS02295;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=CCO57_RS02295;old_locus_tag=CCO57_02295 NZ_NPMC01000001.1 Protein Homology CDS 464878 465240 . + 0 ID=cds-WP_000384308.1;Parent=gene-CCO57_RS02295;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=CCO57_RS02295;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 465474 466427 . + . ID=gene-CCO57_RS02300;Name=CCO57_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02300;old_locus_tag=CCO57_02300 NZ_NPMC01000001.1 Protein Homology CDS 465474 466427 . + 0 ID=cds-WP_001022084.1;Parent=gene-CCO57_RS02300;Dbxref=GenBank:WP_001022084.1;Name=WP_001022084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=CCO57_RS02300;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022084.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 466424 467695 . + . ID=gene-CCO57_RS02305;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=CCO57_RS02305;old_locus_tag=CCO57_02305 NZ_NPMC01000001.1 Protein Homology CDS 466424 467695 . + 0 ID=cds-WP_000782196.1;Parent=gene-CCO57_RS02305;Dbxref=GenBank:WP_000782196.1;Name=WP_000782196.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=CCO57_RS02305;product=D-threonate kinase;protein_id=WP_000782196.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 467685 468668 . + . ID=gene-CCO57_RS02310;Name=CCO57_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02310;old_locus_tag=CCO57_02310 NZ_NPMC01000001.1 Protein Homology CDS 467685 468668 . + 0 ID=cds-WP_000448745.1;Parent=gene-CCO57_RS02310;Dbxref=GenBank:WP_000448745.1;Name=WP_000448745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=CCO57_RS02310;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448745.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 468678 469445 . + . ID=gene-CCO57_RS02315;Name=CCO57_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02315;old_locus_tag=CCO57_02315 NZ_NPMC01000001.1 Protein Homology CDS 468678 469445 . + 0 ID=cds-WP_000678250.1;Parent=gene-CCO57_RS02315;Dbxref=GenBank:WP_000678250.1;Name=WP_000678250.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=CCO57_RS02315;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678250.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 469475 470269 . - . ID=gene-CCO57_RS02320;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=CCO57_RS02320;old_locus_tag=CCO57_02320 NZ_NPMC01000001.1 Protein Homology CDS 469475 470269 . - 0 ID=cds-WP_000734276.1;Parent=gene-CCO57_RS02320;Dbxref=GenBank:WP_000734276.1;Name=WP_000734276.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=CCO57_RS02320;product=adenosylmethionine decarboxylase;protein_id=WP_000734276.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 470290 471150 . - . ID=gene-CCO57_RS02325;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=CCO57_RS02325;old_locus_tag=CCO57_02325 NZ_NPMC01000001.1 Protein Homology CDS 470290 471150 . - 0 ID=cds-WP_000829969.1;Parent=gene-CCO57_RS02325;Dbxref=GenBank:WP_000829969.1;Name=WP_000829969.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=CCO57_RS02325;product=polyamine aminopropyltransferase;protein_id=WP_000829969.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 471257 471604 . - . ID=gene-CCO57_RS02330;Name=CCO57_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02330;old_locus_tag=CCO57_02330 NZ_NPMC01000001.1 Protein Homology CDS 471257 471604 . - 0 ID=cds-WP_000846613.1;Parent=gene-CCO57_RS02330;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=CCO57_RS02330;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 471806 473416 . + . ID=gene-CCO57_RS02335;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=CCO57_RS02335;old_locus_tag=CCO57_02335 NZ_NPMC01000001.1 Protein Homology CDS 471806 473416 . + 0 ID=cds-WP_023225508.1;Parent=gene-CCO57_RS02335;Dbxref=GenBank:WP_023225508.1;Name=WP_023225508.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=CCO57_RS02335;product=multicopper oxidase CueO;protein_id=WP_023225508.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 473494 475884 . - . ID=gene-CCO57_RS02340;Name=CCO57_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02340;old_locus_tag=CCO57_02340 NZ_NPMC01000001.1 Protein Homology CDS 473494 475884 . - 0 ID=cds-WP_000829733.1;Parent=gene-CCO57_RS02340;Dbxref=GenBank:WP_000829733.1;Name=WP_000829733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=CCO57_RS02340;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_000829733.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 476090 476626 . + . ID=gene-CCO57_RS02345;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CCO57_RS02345;old_locus_tag=CCO57_02345 NZ_NPMC01000001.1 Protein Homology CDS 476090 476626 . + 0 ID=cds-WP_000683342.1;Parent=gene-CCO57_RS02345;Dbxref=GenBank:WP_000683342.1;Name=WP_000683342.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=CCO57_RS02345;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683342.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 476684 477346 . - . ID=gene-CCO57_RS02350;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=CCO57_RS02350;old_locus_tag=CCO57_02350 NZ_NPMC01000001.1 Protein Homology CDS 476684 477346 . - 0 ID=cds-WP_000651590.1;Parent=gene-CCO57_RS02350;Dbxref=GenBank:WP_000651590.1;Name=WP_000651590.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=CCO57_RS02350;product=carbonate dehydratase;protein_id=WP_000651590.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 477455 478381 . + . ID=gene-CCO57_RS02355;Name=CCO57_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02355;old_locus_tag=CCO57_02355 NZ_NPMC01000001.1 Protein Homology CDS 477455 478381 . + 0 ID=cds-WP_000150617.1;Parent=gene-CCO57_RS02355;Dbxref=GenBank:WP_000150617.1;Name=WP_000150617.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=CCO57_RS02355;product=ABC transporter ATP-binding protein;protein_id=WP_000150617.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 478378 479148 . + . ID=gene-CCO57_RS02360;Name=CCO57_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02360;old_locus_tag=CCO57_02360 NZ_NPMC01000001.1 Protein Homology CDS 478378 479148 . + 0 ID=cds-WP_000983418.1;Parent=gene-CCO57_RS02360;Dbxref=GenBank:WP_000983418.1;Name=WP_000983418.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=CCO57_RS02360;product=ABC transporter permease;protein_id=WP_000983418.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 479266 480342 . - . ID=gene-CCO57_RS02365;Name=CCO57_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02365;old_locus_tag=CCO57_02365 NZ_NPMC01000001.1 Protein Homology CDS 479266 480342 . - 0 ID=cds-WP_000794036.1;Parent=gene-CCO57_RS02365;Dbxref=GenBank:WP_000794036.1;Name=WP_000794036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=CCO57_RS02365;product=fimbrial protein;protein_id=WP_000794036.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 480351 482897 . - . ID=gene-CCO57_RS02370;Name=CCO57_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02370;old_locus_tag=CCO57_02370 NZ_NPMC01000001.1 Protein Homology CDS 480351 482897 . - 0 ID=cds-WP_001225426.1;Parent=gene-CCO57_RS02370;Dbxref=GenBank:WP_001225426.1;Name=WP_001225426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=CCO57_RS02370;product=fimbrial outer membrane usher protein;protein_id=WP_001225426.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 482924 483607 . - . ID=gene-CCO57_RS02375;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=CCO57_RS02375;old_locus_tag=CCO57_02375 NZ_NPMC01000001.1 Protein Homology CDS 482924 483607 . - 0 ID=cds-WP_086776709.1;Parent=gene-CCO57_RS02375;Dbxref=GenBank:WP_086776709.1;Name=WP_086776709.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=CCO57_RS02375;product=fimbrial biogenesis chaperone StiB;protein_id=WP_086776709.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 483655 484206 . - . ID=gene-CCO57_RS02380;Name=CCO57_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02380;old_locus_tag=CCO57_02380 NZ_NPMC01000001.1 Protein Homology CDS 483655 484206 . - 0 ID=cds-WP_000779119.1;Parent=gene-CCO57_RS02380;Dbxref=GenBank:WP_000779119.1;Name=WP_000779119.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=CCO57_RS02380;product=fimbrial protein;protein_id=WP_000779119.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 484572 485012 . + . ID=gene-CCO57_RS02385;Name=CCO57_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02385;old_locus_tag=CCO57_02385 NZ_NPMC01000001.1 Protein Homology CDS 484572 485012 . + 0 ID=cds-WP_000901967.1;Parent=gene-CCO57_RS02385;Dbxref=GenBank:WP_000901967.1;Name=WP_000901967.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=CCO57_RS02385;product=PTS sugar transporter subunit IIA;protein_id=WP_000901967.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 485074 486303 . + . ID=gene-CCO57_RS02390;Name=CCO57_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02390;old_locus_tag=CCO57_02390 NZ_NPMC01000001.1 Protein Homology CDS 485074 486303 . + 0 ID=cds-WP_001527271.1;Parent=gene-CCO57_RS02390;Dbxref=GenBank:WP_001527271.1;Name=WP_001527271.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=CCO57_RS02390;product=polysaccharide deacetylase family protein;protein_id=WP_001527271.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 486310 486690 . - . ID=gene-CCO57_RS02395;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CCO57_RS02395;old_locus_tag=CCO57_02395 NZ_NPMC01000001.1 Protein Homology CDS 486310 486690 . - 0 ID=cds-WP_000621526.1;Parent=gene-CCO57_RS02395;Dbxref=GenBank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=CCO57_RS02395;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 486785 487639 . - . ID=gene-CCO57_RS02405;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CCO57_RS02405;old_locus_tag=CCO57_02405 NZ_NPMC01000001.1 Protein Homology CDS 486785 487639 . - 0 ID=cds-WP_000905340.1;Parent=gene-CCO57_RS02405;Dbxref=GenBank:WP_000905340.1;Name=WP_000905340.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=CCO57_RS02405;product=pantoate--beta-alanine ligase;protein_id=WP_000905340.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 487765 488559 . - . ID=gene-CCO57_RS02410;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CCO57_RS02410;old_locus_tag=CCO57_02410 NZ_NPMC01000001.1 Protein Homology CDS 487765 488559 . - 0 ID=cds-WP_000043005.1;Parent=gene-CCO57_RS02410;Dbxref=GenBank:WP_000043005.1;Name=WP_000043005.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043003.1;locus_tag=CCO57_RS02410;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000043005.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 488681 489949 . - . ID=gene-CCO57_RS02415;Name=CCO57_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02415;old_locus_tag=CCO57_02415 NZ_NPMC01000001.1 Protein Homology CDS 488681 489949 . - 0 ID=cds-WP_080148205.1;Parent=gene-CCO57_RS02415;Dbxref=GenBank:WP_080148205.1;Name=WP_080148205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218520.1;locus_tag=CCO57_RS02415;product=fimbrial-like adhesin;protein_id=WP_080148205.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 489971 490555 . - . ID=gene-CCO57_RS02420;Name=CCO57_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02420;old_locus_tag=CCO57_02420 NZ_NPMC01000001.1 Protein Homology CDS 489971 490555 . - 0 ID=cds-WP_176342067.1;Parent=gene-CCO57_RS02420;Dbxref=GenBank:WP_176342067.1;Name=WP_176342067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218521.1;locus_tag=CCO57_RS02420;product=fimbrial-like protein;protein_id=WP_176342067.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 490567 491175 . - . ID=gene-CCO57_RS02425;Name=staE;gbkey=Gene;gene=staE;gene_biotype=protein_coding;locus_tag=CCO57_RS02425;old_locus_tag=CCO57_02425 NZ_NPMC01000001.1 Protein Homology CDS 490567 491175 . - 0 ID=cds-WP_080148206.1;Parent=gene-CCO57_RS02425;Dbxref=GenBank:WP_080148206.1;Name=WP_080148206.1;gbkey=CDS;gene=staE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000745165.1;locus_tag=CCO57_RS02425;product=fimbrial protein StaE;protein_id=WP_080148206.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 491190 491756 . - . ID=gene-CCO57_RS02430;Name=CCO57_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02430;old_locus_tag=CCO57_02430 NZ_NPMC01000001.1 Protein Homology CDS 491190 491756 . - 0 ID=cds-WP_001549988.1;Parent=gene-CCO57_RS02430;Dbxref=GenBank:WP_001549988.1;Name=WP_001549988.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542775.1;locus_tag=CCO57_RS02430;product=fimbrial protein;protein_id=WP_001549988.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 491743 494349 . - . ID=gene-CCO57_RS02435;Name=CCO57_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02435;old_locus_tag=CCO57_02435 NZ_NPMC01000001.1 Protein Homology CDS 491743 494349 . - 0 ID=cds-WP_237143024.1;Parent=gene-CCO57_RS02435;Dbxref=GenBank:WP_237143024.1;Name=WP_237143024.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406108.1;locus_tag=CCO57_RS02435;product=outer membrane usher protein;protein_id=WP_237143024.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 494409 495146 . - . ID=gene-CCO57_RS02440;Name=CCO57_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02440;old_locus_tag=CCO57_02440 NZ_NPMC01000001.1 Protein Homology CDS 494409 495146 . - 0 ID=cds-WP_000019793.1;Parent=gene-CCO57_RS02440;Dbxref=GenBank:WP_000019793.1;Name=WP_000019793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019793.1;locus_tag=CCO57_RS02440;product=fimbrial chaperone;protein_id=WP_000019793.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 495412 496005 . - . ID=gene-CCO57_RS02445;Name=CCO57_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02445;old_locus_tag=CCO57_02445 NZ_NPMC01000001.1 Protein Homology CDS 495412 496005 . - 0 ID=cds-WP_080148208.1;Parent=gene-CCO57_RS02445;Dbxref=GenBank:WP_080148208.1;Name=WP_080148208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756782.1;locus_tag=CCO57_RS02445;product=fimbrial protein;protein_id=WP_080148208.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 496409 496888 . - . ID=gene-CCO57_RS02450;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CCO57_RS02450;old_locus_tag=CCO57_02450 NZ_NPMC01000001.1 Protein Homology CDS 496409 496888 . - 0 ID=cds-WP_000150782.1;Parent=gene-CCO57_RS02450;Dbxref=GenBank:WP_000150782.1;Name=WP_000150782.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=CCO57_RS02450;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150782.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 496885 498282 . - . ID=gene-CCO57_RS02455;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=CCO57_RS02455;old_locus_tag=CCO57_02455 NZ_NPMC01000001.1 Protein Homology CDS 496885 498282 . - 0 ID=cds-WP_204100804.1;Parent=gene-CCO57_RS02455;Dbxref=GenBank:WP_204100804.1;Name=WP_204100804.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=CCO57_RS02455;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204100804.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 498444 499340 . - . ID=gene-CCO57_RS02460;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=CCO57_RS02460;old_locus_tag=CCO57_02460 NZ_NPMC01000001.1 Protein Homology CDS 498444 499340 . - 0 ID=cds-WP_024134219.1;Parent=gene-CCO57_RS02460;Dbxref=GenBank:WP_024134219.1;Name=WP_024134219.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=CCO57_RS02460;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_024134219.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 499409 499864 . - . ID=gene-CCO57_RS02465;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=CCO57_RS02465;old_locus_tag=CCO57_02465 NZ_NPMC01000001.1 Protein Homology CDS 499409 499864 . - 0 ID=cds-WP_001155232.1;Parent=gene-CCO57_RS02465;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=CCO57_RS02465;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 500041 500745 . - . ID=gene-CCO57_RS02470;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=CCO57_RS02470;old_locus_tag=CCO57_02470 NZ_NPMC01000001.1 Protein Homology CDS 500041 500745 . - 0 ID=cds-WP_000899412.1;Parent=gene-CCO57_RS02470;Dbxref=GenBank:WP_000899412.1;Name=WP_000899412.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=CCO57_RS02470;product=DNA/RNA nuclease SfsA;protein_id=WP_000899412.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 500762 501292 . - . ID=gene-CCO57_RS02475;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=CCO57_RS02475;old_locus_tag=CCO57_02475 NZ_NPMC01000001.1 Protein Homology CDS 500762 501292 . - 0 ID=cds-WP_001294186.1;Parent=gene-CCO57_RS02475;Dbxref=GenBank:WP_001294186.1;Name=WP_001294186.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=CCO57_RS02475;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294186.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 501365 503794 . + . ID=gene-CCO57_RS02480;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=CCO57_RS02480;old_locus_tag=CCO57_02480 NZ_NPMC01000001.1 Protein Homology CDS 501365 503794 . + 0 ID=cds-WP_176342068.1;Parent=gene-CCO57_RS02480;Dbxref=GenBank:WP_176342068.1;Name=WP_176342068.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=CCO57_RS02480;product=ATP-dependent helicase HrpB;protein_id=WP_176342068.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 503935 506457 . + . ID=gene-CCO57_RS02485;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=CCO57_RS02485;old_locus_tag=CCO57_02485 NZ_NPMC01000001.1 Protein Homology CDS 503935 506457 . + 0 ID=cds-WP_000918127.1;Parent=gene-CCO57_RS02485;Dbxref=GenBank:WP_000918127.1;Name=WP_000918127.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=CCO57_RS02485;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918127.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 506750 508993 . + . ID=gene-CCO57_RS02490;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=CCO57_RS02490;old_locus_tag=CCO57_02490 NZ_NPMC01000001.1 Protein Homology CDS 506750 508993 . + 0 ID=cds-WP_023197096.1;Parent=gene-CCO57_RS02490;Dbxref=GenBank:WP_023197096.1;Name=WP_023197096.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308181.1;locus_tag=CCO57_RS02490;product=ferrichrome porin FhuA;protein_id=WP_023197096.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 509042 509839 . + . ID=gene-CCO57_RS02495;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=CCO57_RS02495;old_locus_tag=CCO57_02495 NZ_NPMC01000001.1 Protein Homology CDS 509042 509839 . + 0 ID=cds-WP_001157205.1;Parent=gene-CCO57_RS02495;Dbxref=GenBank:WP_001157205.1;Name=WP_001157205.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=CCO57_RS02495;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157205.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 509839 510729 . + . ID=gene-CCO57_RS02500;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=CCO57_RS02500;old_locus_tag=CCO57_02500 NZ_NPMC01000001.1 Protein Homology CDS 509839 510729 . + 0 ID=cds-WP_023197097.1;Parent=gene-CCO57_RS02500;Dbxref=GenBank:WP_023197097.1;Name=WP_023197097.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=CCO57_RS02500;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_023197097.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 510744 512783 . + . ID=gene-CCO57_RS02505;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=CCO57_RS02505;old_locus_tag=CCO57_02505 NZ_NPMC01000001.1 Protein Homology CDS 510744 512783 . + 0 ID=cds-WP_094914792.1;Parent=gene-CCO57_RS02505;Dbxref=GenBank:WP_094914792.1;Name=WP_094914792.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=CCO57_RS02505;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_094914792.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 512868 514148 . - . ID=gene-CCO57_RS02510;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CCO57_RS02510;old_locus_tag=CCO57_02510 NZ_NPMC01000001.1 Protein Homology CDS 512868 514148 . - 0 ID=cds-WP_000045251.1;Parent=gene-CCO57_RS02510;Dbxref=GenBank:WP_000045251.1;Name=WP_000045251.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=CCO57_RS02510;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045251.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 514318 515739 . + . ID=gene-CCO57_RS02515;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=CCO57_RS02515;old_locus_tag=CCO57_02515 NZ_NPMC01000001.1 Protein Homology CDS 514318 515739 . + 0 ID=cds-WP_000845430.1;Parent=gene-CCO57_RS02515;Dbxref=GenBank:WP_000845430.1;Name=WP_000845430.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=CCO57_RS02515;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845430.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 515821 516165 . + . ID=gene-CCO57_RS02520;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=CCO57_RS02520;old_locus_tag=CCO57_02520 NZ_NPMC01000001.1 Protein Homology CDS 515821 516165 . + 0 ID=cds-WP_001278668.1;Parent=gene-CCO57_RS02520;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=CCO57_RS02520;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 516266 516889 . - . ID=gene-CCO57_RS02525;Name=CCO57_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02525;old_locus_tag=CCO57_02525 NZ_NPMC01000001.1 Protein Homology CDS 516266 516889 . - 0 ID=cds-WP_000964234.1;Parent=gene-CCO57_RS02525;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=CCO57_RS02525;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 516926 517726 . - . ID=gene-CCO57_RS02530;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=CCO57_RS02530;old_locus_tag=CCO57_02530 NZ_NPMC01000001.1 Protein Homology CDS 516926 517726 . - 0 ID=cds-WP_001118843.1;Parent=gene-CCO57_RS02530;Dbxref=GenBank:WP_001118843.1;Name=WP_001118843.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=CCO57_RS02530;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118843.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 517719 518417 . - . ID=gene-CCO57_RS02535;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=CCO57_RS02535;old_locus_tag=CCO57_02535 NZ_NPMC01000001.1 Protein Homology CDS 517719 518417 . - 0 ID=cds-WP_000689822.1;Parent=gene-CCO57_RS02535;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=CCO57_RS02535;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 518502 520019 . + . ID=gene-CCO57_RS02540;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=CCO57_RS02540;old_locus_tag=CCO57_02540 NZ_NPMC01000001.1 Protein Homology CDS 518502 520019 . + 0 ID=cds-WP_000146450.1;Parent=gene-CCO57_RS02540;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=CCO57_RS02540;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 520149 521576 . + . ID=gene-CCO57_RS02545;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=CCO57_RS02545;old_locus_tag=CCO57_02545 NZ_NPMC01000001.1 Protein Homology CDS 520149 521576 . + 0 ID=cds-WP_000753958.1;Parent=gene-CCO57_RS02545;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=CCO57_RS02545;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 521729 522886 . + . ID=gene-CCO57_RS02550;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=CCO57_RS02550;old_locus_tag=CCO57_02550 NZ_NPMC01000001.1 Protein Homology CDS 521729 522886 . + 0 ID=cds-WP_000929420.1;Parent=gene-CCO57_RS02550;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=CCO57_RS02550;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 523008 525977 . - . ID=gene-CCO57_RS02555;Name=CCO57_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02555;old_locus_tag=CCO57_02555 NZ_NPMC01000001.1 Protein Homology CDS 523008 525977 . - 0 ID=cds-WP_094914793.1;Parent=gene-CCO57_RS02555;Dbxref=GenBank:WP_094914793.1;Name=WP_094914793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527551.1;locus_tag=CCO57_RS02555;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_094914793.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 526163 526549 . - . ID=gene-CCO57_RS02560;Name=CCO57_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02560;old_locus_tag=CCO57_02560 NZ_NPMC01000001.1 Protein Homology CDS 526163 526549 . - 0 ID=cds-WP_000272193.1;Parent=gene-CCO57_RS02560;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=CCO57_RS02560;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 526796 528097 . + . ID=gene-CCO57_RS02565;Name=CCO57_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02565;old_locus_tag=CCO57_02565 NZ_NPMC01000001.1 Protein Homology CDS 526796 528097 . + 0 ID=cds-WP_001527609.1;Parent=gene-CCO57_RS02565;Dbxref=GenBank:WP_001527609.1;Name=WP_001527609.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=CCO57_RS02565;product=MFS transporter;protein_id=WP_001527609.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 528134 528958 . - . ID=gene-CCO57_RS02570;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CCO57_RS02570;old_locus_tag=CCO57_02570 NZ_NPMC01000001.1 Protein Homology CDS 528134 528958 . - 0 ID=cds-WP_001186673.1;Parent=gene-CCO57_RS02570;Dbxref=GenBank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=CCO57_RS02570;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 528988 531660 . - . ID=gene-CCO57_RS02575;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=CCO57_RS02575;old_locus_tag=CCO57_02575 NZ_NPMC01000001.1 Protein Homology CDS 528988 531660 . - 0 ID=cds-WP_001094523.1;Parent=gene-CCO57_RS02575;Dbxref=GenBank:WP_001094523.1;Name=WP_001094523.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=CCO57_RS02575;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094523.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 531898 532692 . - . ID=gene-CCO57_RS02585;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CCO57_RS02585;old_locus_tag=CCO57_02585 NZ_NPMC01000001.1 Protein Homology CDS 531898 532692 . - 0 ID=cds-WP_001018214.1;Parent=gene-CCO57_RS02585;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=CCO57_RS02585;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 533143 533868 . + . ID=gene-CCO57_RS02595;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CCO57_RS02595;old_locus_tag=CCO57_02595 NZ_NPMC01000001.1 Protein Homology CDS 533143 533868 . + 0 ID=cds-WP_000246886.1;Parent=gene-CCO57_RS02595;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=CCO57_RS02595;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 534126 534977 . + . ID=gene-CCO57_RS02605;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CCO57_RS02605;old_locus_tag=CCO57_02605 NZ_NPMC01000001.1 Protein Homology CDS 534126 534977 . + 0 ID=cds-WP_000808106.1;Parent=gene-CCO57_RS02605;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=CCO57_RS02605;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 535122 535847 . + . ID=gene-CCO57_RS02610;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CCO57_RS02610;old_locus_tag=CCO57_02610 NZ_NPMC01000001.1 Protein Homology CDS 535122 535847 . + 0 ID=cds-WP_000224567.1;Parent=gene-CCO57_RS02610;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=CCO57_RS02610;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 535994 536551 . + . ID=gene-CCO57_RS02615;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CCO57_RS02615;old_locus_tag=CCO57_02615 NZ_NPMC01000001.1 Protein Homology CDS 535994 536551 . + 0 ID=cds-WP_000622423.1;Parent=gene-CCO57_RS02615;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=CCO57_RS02615;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 536693 537889 . + . ID=gene-CCO57_RS02620;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=CCO57_RS02620;old_locus_tag=CCO57_02620 NZ_NPMC01000001.1 Protein Homology CDS 536693 537889 . + 0 ID=cds-WP_000811899.1;Parent=gene-CCO57_RS02620;Dbxref=GenBank:WP_000811899.1;Name=WP_000811899.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=CCO57_RS02620;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811899.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 538202 538960 . + . ID=gene-CCO57_RS02630;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=CCO57_RS02630;old_locus_tag=CCO57_02630 NZ_NPMC01000001.1 Protein Homology CDS 538202 538960 . + 0 ID=cds-WP_000947413.1;Parent=gene-CCO57_RS02630;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=CCO57_RS02630;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 538973 539830 . + . ID=gene-CCO57_RS02635;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=CCO57_RS02635;old_locus_tag=CCO57_02635 NZ_NPMC01000001.1 Protein Homology CDS 538973 539830 . + 0 ID=cds-WP_000922422.1;Parent=gene-CCO57_RS02635;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=CCO57_RS02635;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 539842 541194 . + . ID=gene-CCO57_RS02640;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CCO57_RS02640;old_locus_tag=CCO57_02640 NZ_NPMC01000001.1 Protein Homology CDS 539842 541194 . + 0 ID=cds-WP_000949017.1;Parent=gene-CCO57_RS02640;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=CCO57_RS02640;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 541226 543640 . + . ID=gene-CCO57_RS02645;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=CCO57_RS02645;old_locus_tag=CCO57_02645 NZ_NPMC01000001.1 Protein Homology CDS 541226 543640 . + 0 ID=cds-WP_001240928.1;Parent=gene-CCO57_RS02645;Dbxref=GenBank:WP_001240928.1;Name=WP_001240928.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=CCO57_RS02645;product=outer membrane protein assembly factor BamA;protein_id=WP_001240928.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 543763 544248 . + . ID=gene-CCO57_RS02650;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=CCO57_RS02650;old_locus_tag=CCO57_02650 NZ_NPMC01000001.1 Protein Homology CDS 543763 544248 . + 0 ID=cds-WP_000758966.1;Parent=gene-CCO57_RS02650;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=CCO57_RS02650;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 544252 545277 . + . ID=gene-CCO57_RS02655;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CCO57_RS02655;old_locus_tag=CCO57_02655 NZ_NPMC01000001.1 Protein Homology CDS 544252 545277 . + 0 ID=cds-WP_001139266.1;Parent=gene-CCO57_RS02655;Dbxref=GenBank:WP_001139266.1;Name=WP_001139266.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=CCO57_RS02655;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139266.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 545383 545838 . + . ID=gene-CCO57_RS02660;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CCO57_RS02660;old_locus_tag=CCO57_02660 NZ_NPMC01000001.1 Protein Homology CDS 545383 545838 . + 0 ID=cds-WP_000210741.1;Parent=gene-CCO57_RS02660;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=CCO57_RS02660;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 545842 546630 . + . ID=gene-CCO57_RS02665;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=CCO57_RS02665;old_locus_tag=CCO57_02665 NZ_NPMC01000001.1 Protein Homology CDS 545842 546630 . + 0 ID=cds-WP_000565950.1;Parent=gene-CCO57_RS02665;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=CCO57_RS02665;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 546630 547778 . + . ID=gene-CCO57_RS02670;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CCO57_RS02670;old_locus_tag=CCO57_02670 NZ_NPMC01000001.1 Protein Homology CDS 546630 547778 . + 0 ID=cds-WP_000741216.1;Parent=gene-CCO57_RS02670;Dbxref=GenBank:WP_000741216.1;Name=WP_000741216.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=CCO57_RS02670;product=lipid-A-disaccharide synthase;protein_id=WP_000741216.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 547775 548371 . + . ID=gene-CCO57_RS02675;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CCO57_RS02675;old_locus_tag=CCO57_02675 NZ_NPMC01000001.1 Protein Homology CDS 547775 548371 . + 0 ID=cds-WP_000569411.1;Parent=gene-CCO57_RS02675;Dbxref=GenBank:WP_000569411.1;Name=WP_000569411.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=CCO57_RS02675;product=ribonuclease HII;protein_id=WP_000569411.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 548395 551877 . + . ID=gene-CCO57_RS02680;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=CCO57_RS02680;old_locus_tag=CCO57_02680 NZ_NPMC01000001.1 Protein Homology CDS 548395 551877 . + 0 ID=cds-WP_023207369.1;Parent=gene-CCO57_RS02680;Dbxref=GenBank:WP_023207369.1;Name=WP_023207369.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=CCO57_RS02680;product=DNA polymerase III subunit alpha;protein_id=WP_023207369.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 551890 552849 . + . ID=gene-CCO57_RS02685;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=CCO57_RS02685;old_locus_tag=CCO57_02685 NZ_NPMC01000001.1 Protein Homology CDS 551890 552849 . + 0 ID=cds-WP_000055753.1;Parent=gene-CCO57_RS02685;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=CCO57_RS02685;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11 NZ_NPMC01000001.1 RefSeq pseudogene 553028 554791 . + . ID=gene-CCO57_RS02690;Name=CCO57_RS02690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS02690;old_locus_tag=CCO57_02690;pseudo=true NZ_NPMC01000001.1 Protein Homology CDS 553028 554791 . + 0 ID=cds-CCO57_RS02690;Parent=gene-CCO57_RS02690;Note=internal stop;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=CCO57_RS02690;product=glycoside hydrolase family 19 protein;pseudo=true;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 554867 557008 . + . ID=gene-CCO57_RS02695;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=CCO57_RS02695;old_locus_tag=CCO57_02695 NZ_NPMC01000001.1 Protein Homology CDS 554867 557008 . + 0 ID=cds-WP_001021044.1;Parent=gene-CCO57_RS02695;Dbxref=GenBank:WP_001021044.1;Name=WP_001021044.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=CCO57_RS02695;product=lysine decarboxylase LdcC;protein_id=WP_001021044.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 557064 557453 . + . ID=gene-CCO57_RS02700;Name=CCO57_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02700;old_locus_tag=CCO57_02700 NZ_NPMC01000001.1 Protein Homology CDS 557064 557453 . + 0 ID=cds-WP_000901088.1;Parent=gene-CCO57_RS02700;Dbxref=GenBank:WP_000901088.1;Name=WP_000901088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=CCO57_RS02700;product=VOC family protein;protein_id=WP_000901088.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 557516 558808 . + . ID=gene-CCO57_RS02705;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CCO57_RS02705;old_locus_tag=CCO57_02705 NZ_NPMC01000001.1 Protein Homology CDS 557516 558808 . + 0 ID=cds-WP_094914794.1;Parent=gene-CCO57_RS02705;Dbxref=GenBank:WP_094914794.1;Name=WP_094914794.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=CCO57_RS02705;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_094914794.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 558892 559152 . - . ID=gene-CCO57_RS02710;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=CCO57_RS02710;old_locus_tag=CCO57_02710 NZ_NPMC01000001.1 Protein Homology CDS 558892 559152 . - 0 ID=cds-WP_000062329.1;Parent=gene-CCO57_RS02710;Dbxref=GenBank:WP_000062329.1;Name=WP_000062329.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=CCO57_RS02710;product=Rho-binding antiterminator;protein_id=WP_000062329.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 559139 559339 . - . ID=gene-CCO57_RS02715;Name=CCO57_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02715;old_locus_tag=CCO57_02715 NZ_NPMC01000001.1 Protein Homology CDS 559139 559339 . - 0 ID=cds-WP_001518678.1;Parent=gene-CCO57_RS02715;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=CCO57_RS02715;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 559537 560082 . + . ID=gene-CCO57_RS02720;Name=CCO57_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02720;old_locus_tag=CCO57_02720 NZ_NPMC01000001.1 Protein Homology CDS 559537 560082 . + 0 ID=cds-WP_001185319.1;Parent=gene-CCO57_RS02720;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=CCO57_RS02720;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 560079 560501 . + . ID=gene-CCO57_RS02725;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=CCO57_RS02725;old_locus_tag=CCO57_02725 NZ_NPMC01000001.1 Protein Homology CDS 560079 560501 . + 0 ID=cds-WP_000560524.1;Parent=gene-CCO57_RS02725;Dbxref=GenBank:WP_000560524.1;Name=WP_000560524.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=CCO57_RS02725;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560524.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 560533 561234 . + . ID=gene-CCO57_RS02730;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=CCO57_RS02730;old_locus_tag=CCO57_02730 NZ_NPMC01000001.1 Protein Homology CDS 560533 561234 . + 0 ID=cds-WP_000252576.1;Parent=gene-CCO57_RS02730;Dbxref=GenBank:WP_000252576.1;Name=WP_000252576.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=CCO57_RS02730;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252576.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 561308 563026 . - . ID=gene-CCO57_RS02735;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=CCO57_RS02735;old_locus_tag=CCO57_02735 NZ_NPMC01000001.1 Protein Homology CDS 561308 563026 . - 0 ID=cds-WP_001260675.1;Parent=gene-CCO57_RS02735;Dbxref=GenBank:WP_001260675.1;Name=WP_001260675.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=CCO57_RS02735;product=proline--tRNA ligase;protein_id=WP_001260675.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 563137 563844 . - . ID=gene-CCO57_RS02740;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=CCO57_RS02740;old_locus_tag=CCO57_02740 NZ_NPMC01000001.1 Protein Homology CDS 563137 563844 . - 0 ID=cds-WP_094914795.1;Parent=gene-CCO57_RS02740;Dbxref=GenBank:WP_094914795.1;Name=WP_094914795.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=CCO57_RS02740;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_094914795.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 563841 564245 . - . ID=gene-CCO57_RS02745;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=CCO57_RS02745;old_locus_tag=CCO57_02745 NZ_NPMC01000001.1 Protein Homology CDS 563841 564245 . - 0 ID=cds-WP_001202315.1;Parent=gene-CCO57_RS02745;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=CCO57_RS02745;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 564364 565179 . - . ID=gene-CCO57_RS02750;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=CCO57_RS02750;old_locus_tag=CCO57_02750 NZ_NPMC01000001.1 Protein Homology CDS 564364 565179 . - 0 ID=cds-WP_000874215.1;Parent=gene-CCO57_RS02750;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=CCO57_RS02750;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 565218 565871 . - . ID=gene-CCO57_RS02755;Name=CCO57_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02755;old_locus_tag=CCO57_02755 NZ_NPMC01000001.1 Protein Homology CDS 565218 565871 . - 0 ID=cds-WP_001287486.1;Parent=gene-CCO57_RS02755;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=CCO57_RS02755;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 565864 566895 . - . ID=gene-CCO57_RS02760;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=CCO57_RS02760;old_locus_tag=CCO57_02760 NZ_NPMC01000001.1 Protein Homology CDS 565864 566895 . - 0 ID=cds-WP_000594021.1;Parent=gene-CCO57_RS02760;Dbxref=GenBank:WP_000594021.1;Name=WP_000594021.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=CCO57_RS02760;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594021.1;transl_table=11 NZ_NPMC01000001.1 RefSeq gene 567085 567651 . + . ID=gene-CCO57_RS02765;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=CCO57_RS02765;old_locus_tag=CCO57_02765 NZ_NPMC01000001.1 Protein Homology CDS 567085 567651 . + 0 ID=cds-WP_001140158.1;Parent=gene-CCO57_RS02765;Dbxref=GenBank:WP_001140158.1;Name=WP_001140158.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=CCO57_RS02765;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140158.1;transl_table=11 ##sequence-region NZ_NPMC01000010.1 1 155554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000010.1 RefSeq region 1 155554 . + . ID=NZ_NPMC01000010.1:1..155554;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000010.1 RefSeq gene 429 1280 . - . ID=gene-CCO57_RS16800;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CCO57_RS16800;old_locus_tag=CCO57_16785 NZ_NPMC01000010.1 Protein Homology CDS 429 1280 . - 0 ID=cds-WP_000201804.1;Parent=gene-CCO57_RS16800;Dbxref=GenBank:WP_000201804.1;Name=WP_000201804.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=CCO57_RS16800;product=glutamate racemase;protein_id=WP_000201804.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 1225 3069 . - . ID=gene-CCO57_RS16805;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=CCO57_RS16805;old_locus_tag=CCO57_16790 NZ_NPMC01000010.1 Protein Homology CDS 1225 3069 . - 0 ID=cds-WP_000591409.1;Parent=gene-CCO57_RS16805;Dbxref=GenBank:WP_000591409.1;Name=WP_000591409.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=CCO57_RS16805;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591409.1;transl_table=11 NZ_NPMC01000010.1 cmsearch riboswitch 3136 3328 . - . ID=id-NZ_NPMC01000010.1:3136..3328;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMC01000010.1 RefSeq gene 3443 4543 . + . ID=gene-CCO57_RS16810;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=CCO57_RS16810;old_locus_tag=CCO57_16795 NZ_NPMC01000010.1 Protein Homology CDS 3443 4543 . + 0 ID=cds-WP_023197536.1;Parent=gene-CCO57_RS16810;Dbxref=GenBank:WP_023197536.1;Name=WP_023197536.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=CCO57_RS16810;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_023197536.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 4590 4949 . - . ID=gene-CCO57_RS16815;Name=CCO57_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16815;old_locus_tag=CCO57_16800 NZ_NPMC01000010.1 Protein Homology CDS 4590 4949 . - 0 ID=cds-WP_000813838.1;Parent=gene-CCO57_RS16815;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=CCO57_RS16815;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 4965 5600 . - . ID=gene-CCO57_RS16820;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=CCO57_RS16820;old_locus_tag=CCO57_16805 NZ_NPMC01000010.1 Protein Homology CDS 4965 5600 . - 0 ID=cds-WP_000971960.1;Parent=gene-CCO57_RS16820;Dbxref=GenBank:WP_000971960.1;Name=WP_000971960.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=CCO57_RS16820;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971960.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 5799 7199 . + . ID=gene-CCO57_RS16830;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO57_RS16830;old_locus_tag=CCO57_16815 NZ_NPMC01000010.1 Protein Homology CDS 5799 7199 . + 0 ID=cds-WP_001120789.1;Parent=gene-CCO57_RS16830;Dbxref=GenBank:WP_001120789.1;Name=WP_001120789.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=CCO57_RS16830;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120789.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 7182 8099 . - . ID=gene-CCO57_RS16835;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=CCO57_RS16835;old_locus_tag=CCO57_16820 NZ_NPMC01000010.1 Protein Homology CDS 7182 8099 . - 0 ID=cds-WP_001025919.1;Parent=gene-CCO57_RS16835;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=CCO57_RS16835;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 8383 9759 . - . ID=gene-CCO57_RS16845;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CCO57_RS16845;old_locus_tag=CCO57_16830 NZ_NPMC01000010.1 Protein Homology CDS 8383 9759 . - 0 ID=cds-WP_001230057.1;Parent=gene-CCO57_RS16845;Dbxref=GenBank:WP_001230057.1;Name=WP_001230057.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=CCO57_RS16845;product=argininosuccinate lyase;protein_id=WP_001230057.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 9877 10653 . - . ID=gene-CCO57_RS16850;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=CCO57_RS16850;old_locus_tag=CCO57_16835 NZ_NPMC01000010.1 Protein Homology CDS 9877 10653 . - 0 ID=cds-WP_086776771.1;Parent=gene-CCO57_RS16850;Dbxref=GenBank:WP_086776771.1;Name=WP_086776771.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=CCO57_RS16850;product=acetylglutamate kinase;protein_id=WP_086776771.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 10661 11665 . - . ID=gene-CCO57_RS16855;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=CCO57_RS16855;old_locus_tag=CCO57_16840 NZ_NPMC01000010.1 Protein Homology CDS 10661 11665 . - 0 ID=cds-WP_000935343.1;Parent=gene-CCO57_RS16855;Dbxref=GenBank:WP_000935343.1;Name=WP_000935343.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=CCO57_RS16855;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935343.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 11754 12905 . + . ID=gene-CCO57_RS16860;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=CCO57_RS16860;old_locus_tag=CCO57_16845 NZ_NPMC01000010.1 Protein Homology CDS 11754 12905 . + 0 ID=cds-WP_000800208.1;Parent=gene-CCO57_RS16860;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=CCO57_RS16860;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 13297 15948 . + . ID=gene-CCO57_RS16870;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=CCO57_RS16870;old_locus_tag=CCO57_16850 NZ_NPMC01000010.1 Protein Homology CDS 13297 15948 . + 0 ID=cds-WP_001005549.1;Parent=gene-CCO57_RS16870;Dbxref=GenBank:WP_001005549.1;Name=WP_001005549.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=CCO57_RS16870;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005549.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 16159 17892 . + . ID=gene-CCO57_RS16875;Name=CCO57_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16875;old_locus_tag=CCO57_16855 NZ_NPMC01000010.1 Protein Homology CDS 16159 17892 . + 0 ID=cds-WP_001192092.1;Parent=gene-CCO57_RS16875;Dbxref=GenBank:WP_001192092.1;Name=WP_001192092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=CCO57_RS16875;product=phosphoethanolamine transferase CptA;protein_id=WP_001192092.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 18053 18889 . + . ID=gene-CCO57_RS16880;Name=CCO57_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16880;old_locus_tag=CCO57_16860 NZ_NPMC01000010.1 Protein Homology CDS 18053 18889 . + 0 ID=cds-WP_000274595.1;Parent=gene-CCO57_RS16880;Dbxref=GenBank:WP_000274595.1;Name=WP_000274595.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=CCO57_RS16880;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274595.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 19144 19806 . + . ID=gene-CCO57_RS16885;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CCO57_RS16885;old_locus_tag=CCO57_16865 NZ_NPMC01000010.1 Protein Homology CDS 19144 19806 . + 0 ID=cds-WP_000424866.1;Parent=gene-CCO57_RS16885;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=CCO57_RS16885;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 19818 20921 . + . ID=gene-CCO57_RS16890;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=CCO57_RS16890;old_locus_tag=CCO57_16870 NZ_NPMC01000010.1 Protein Homology CDS 19818 20921 . + 0 ID=cds-WP_000374031.1;Parent=gene-CCO57_RS16890;Dbxref=GenBank:WP_000374031.1;Name=WP_000374031.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=CCO57_RS16890;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374031.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 21028 23208 . - . ID=gene-CCO57_RS16895;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=CCO57_RS16895;old_locus_tag=CCO57_16875 NZ_NPMC01000010.1 Protein Homology CDS 21028 23208 . - 0 ID=cds-WP_000108113.1;Parent=gene-CCO57_RS16895;Dbxref=GenBank:WP_000108113.1;Name=WP_000108113.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312898.1;locus_tag=CCO57_RS16895;product=catalase/peroxidase HPI;protein_id=WP_000108113.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 23373 24263 . - . ID=gene-CCO57_RS16900;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=CCO57_RS16900;old_locus_tag=CCO57_16880 NZ_NPMC01000010.1 Protein Homology CDS 23373 24263 . - 0 ID=cds-WP_000007507.1;Parent=gene-CCO57_RS16900;Dbxref=GenBank:WP_000007507.1;Name=WP_000007507.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=CCO57_RS16900;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 24458 26014 . - . ID=gene-CCO57_RS16905;Name=CCO57_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16905;old_locus_tag=CCO57_16885 NZ_NPMC01000010.1 Protein Homology CDS 24458 26014 . - 0 ID=cds-WP_000865250.1;Parent=gene-CCO57_RS16905;Dbxref=GenBank:WP_000865250.1;Name=WP_000865250.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=CCO57_RS16905;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000865250.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 26150 27274 . + . ID=gene-CCO57_RS16910;Name=CCO57_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16910;old_locus_tag=CCO57_16890 NZ_NPMC01000010.1 Protein Homology CDS 26150 27274 . + 0 ID=cds-WP_001134820.1;Parent=gene-CCO57_RS16910;Dbxref=GenBank:WP_001134820.1;Name=WP_001134820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=CCO57_RS16910;product=hypothetical protein;protein_id=WP_001134820.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 27509 28507 . + . ID=gene-CCO57_RS16915;Name=CCO57_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16915;old_locus_tag=CCO57_16895 NZ_NPMC01000010.1 Protein Homology CDS 27509 28507 . + 0 ID=cds-WP_094915046.1;Parent=gene-CCO57_RS16915;Dbxref=GenBank:WP_094915046.1;Name=WP_094915046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=CCO57_RS16915;product=hypothetical protein;protein_id=WP_094915046.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 28510 29367 . + . ID=gene-CCO57_RS16920;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=CCO57_RS16920;old_locus_tag=CCO57_16900 NZ_NPMC01000010.1 Protein Homology CDS 28510 29367 . + 0 ID=cds-WP_000398243.1;Parent=gene-CCO57_RS16920;Dbxref=GenBank:WP_000398243.1;Name=WP_000398243.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=CCO57_RS16920;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398243.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 29503 31935 . - . ID=gene-CCO57_RS16925;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=CCO57_RS16925;old_locus_tag=CCO57_16905 NZ_NPMC01000010.1 Protein Homology CDS 29503 31935 . - 0 ID=cds-WP_001528872.1;Parent=gene-CCO57_RS16925;Dbxref=GenBank:WP_001528872.1;Name=WP_001528872.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=CCO57_RS16925;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_001528872.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 31938 33098 . - . ID=gene-CCO57_RS16930;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=CCO57_RS16930;old_locus_tag=CCO57_16910 NZ_NPMC01000010.1 Protein Homology CDS 31938 33098 . - 0 ID=cds-WP_000197212.1;Parent=gene-CCO57_RS16930;Dbxref=GenBank:WP_000197212.1;Name=WP_000197212.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=CCO57_RS16930;product=cystathionine gamma-synthase;protein_id=WP_000197212.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 33363 33680 . + . ID=gene-CCO57_RS16935;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=CCO57_RS16935;old_locus_tag=CCO57_16915 NZ_NPMC01000010.1 Protein Homology CDS 33363 33680 . + 0 ID=cds-WP_000852811.1;Parent=gene-CCO57_RS16935;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=CCO57_RS16935;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 34138 35928 . + . ID=gene-CCO57_RS16940;Name=CCO57_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16940;old_locus_tag=CCO57_16920 NZ_NPMC01000010.1 Protein Homology CDS 34138 35928 . + 0 ID=cds-WP_000899639.1;Parent=gene-CCO57_RS16940;Dbxref=GenBank:WP_000899639.1;Name=WP_000899639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=CCO57_RS16940;product=aryl-sulfate sulfotransferase;protein_id=WP_000899639.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 36129 36791 . + . ID=gene-CCO57_RS16945;Name=CCO57_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16945;old_locus_tag=CCO57_16925 NZ_NPMC01000010.1 Protein Homology CDS 36129 36791 . + 0 ID=cds-WP_023214540.1;Parent=gene-CCO57_RS16945;Dbxref=GenBank:WP_023214540.1;Name=WP_023214540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=CCO57_RS16945;product=TIGR02117 family protein;protein_id=WP_023214540.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 36836 37048 . - . ID=gene-CCO57_RS16950;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=CCO57_RS16950;old_locus_tag=CCO57_16930 NZ_NPMC01000010.1 Protein Homology CDS 36836 37048 . - 0 ID=cds-WP_000715284.1;Parent=gene-CCO57_RS16950;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=CCO57_RS16950;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 37252 39450 . + . ID=gene-CCO57_RS16955;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CCO57_RS16955;old_locus_tag=CCO57_16935 NZ_NPMC01000010.1 Protein Homology CDS 37252 39450 . + 0 ID=cds-WP_094915047.1;Parent=gene-CCO57_RS16955;Dbxref=GenBank:WP_094915047.1;Name=WP_094915047.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=CCO57_RS16955;product=primosomal protein N';protein_id=WP_094915047.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 39605 40630 . + . ID=gene-CCO57_RS16960;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=CCO57_RS16960;old_locus_tag=CCO57_16940 NZ_NPMC01000010.1 Protein Homology CDS 39605 40630 . + 0 ID=cds-WP_000841337.1;Parent=gene-CCO57_RS16960;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=CCO57_RS16960;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 40724 41695 . + . ID=gene-CCO57_RS16965;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=CCO57_RS16965;old_locus_tag=CCO57_16945 NZ_NPMC01000010.1 Protein Homology CDS 40724 41695 . + 0 ID=cds-WP_000068814.1;Parent=gene-CCO57_RS16965;Dbxref=GenBank:WP_000068814.1;Name=WP_000068814.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=CCO57_RS16965;product=cell division protein FtsN;protein_id=WP_000068814.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 41787 42317 . + . ID=gene-CCO57_RS16970;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CCO57_RS16970;old_locus_tag=CCO57_16950 NZ_NPMC01000010.1 Protein Homology CDS 41787 42317 . + 0 ID=cds-WP_000208240.1;Parent=gene-CCO57_RS16970;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=CCO57_RS16970;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 42327 43658 . + . ID=gene-CCO57_RS16975;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CCO57_RS16975;old_locus_tag=CCO57_16955 NZ_NPMC01000010.1 Protein Homology CDS 42327 43658 . + 0 ID=cds-WP_001293360.1;Parent=gene-CCO57_RS16975;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=CCO57_RS16975;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293360.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 43725 44654 . + . ID=gene-CCO57_RS16980;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=CCO57_RS16980;old_locus_tag=CCO57_16960 NZ_NPMC01000010.1 Protein Homology CDS 43725 44654 . + 0 ID=cds-WP_000139639.1;Parent=gene-CCO57_RS16980;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=CCO57_RS16980;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 44747 45232 . + . ID=gene-CCO57_RS16985;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=CCO57_RS16985;old_locus_tag=CCO57_16965 NZ_NPMC01000010.1 Protein Homology CDS 44747 45232 . + 0 ID=cds-WP_000872918.1;Parent=gene-CCO57_RS16985;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=CCO57_RS16985;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 45454 45693 . - . ID=gene-CCO57_RS16990;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=CCO57_RS16990;old_locus_tag=CCO57_16970 NZ_NPMC01000010.1 Protein Homology CDS 45454 45693 . - 0 ID=cds-WP_000051370.1;Parent=gene-CCO57_RS16990;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=CCO57_RS16990;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 46092 46937 . + . ID=gene-CCO57_RS16995;Name=CCO57_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16995;old_locus_tag=CCO57_16975 NZ_NPMC01000010.1 Protein Homology CDS 46092 46937 . + 0 ID=cds-WP_000084285.1;Parent=gene-CCO57_RS16995;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=CCO57_RS16995;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 46958 48466 . + . ID=gene-CCO57_RS17000;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CCO57_RS17000;old_locus_tag=CCO57_16980 NZ_NPMC01000010.1 Protein Homology CDS 46958 48466 . + 0 ID=cds-WP_001523753.1;Parent=gene-CCO57_RS17000;Dbxref=GenBank:WP_001523753.1;Name=WP_001523753.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=CCO57_RS17000;product=glycerol kinase GlpK;protein_id=WP_001523753.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 48578 49588 . + . ID=gene-CCO57_RS17005;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO57_RS17005;old_locus_tag=CCO57_16985 NZ_NPMC01000010.1 Protein Homology CDS 48578 49588 . + 0 ID=cds-WP_001250617.1;Parent=gene-CCO57_RS17005;Dbxref=GenBank:WP_001250617.1;Name=WP_001250617.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=CCO57_RS17005;product=class II fructose-bisphosphatase;protein_id=WP_001250617.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 49685 50431 . + . ID=gene-CCO57_RS17010;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=CCO57_RS17010;old_locus_tag=CCO57_16990 NZ_NPMC01000010.1 Protein Homology CDS 49685 50431 . + 0 ID=cds-WP_094915048.1;Parent=gene-CCO57_RS17010;Dbxref=GenBank:WP_094915048.1;Name=WP_094915048.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=CCO57_RS17010;product=ferredoxin--NADP(+) reductase;protein_id=WP_094915048.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 50538 50966 . - . ID=gene-CCO57_RS17015;Name=CCO57_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17015;old_locus_tag=CCO57_16995 NZ_NPMC01000010.1 Protein Homology CDS 50538 50966 . - 0 ID=cds-WP_000155237.1;Parent=gene-CCO57_RS17015;Dbxref=GenBank:WP_000155237.1;Name=WP_000155237.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=CCO57_RS17015;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 51067 51663 . + . ID=gene-CCO57_RS17020;Name=CCO57_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17020;old_locus_tag=CCO57_17000 NZ_NPMC01000010.1 Protein Homology CDS 51067 51663 . + 0 ID=cds-WP_000802241.1;Parent=gene-CCO57_RS17020;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=CCO57_RS17020;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 51776 52543 . + . ID=gene-CCO57_RS17025;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CCO57_RS17025;old_locus_tag=CCO57_17005 NZ_NPMC01000010.1 Protein Homology CDS 51776 52543 . + 0 ID=cds-WP_001216336.1;Parent=gene-CCO57_RS17025;Dbxref=GenBank:WP_001216336.1;Name=WP_001216336.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=CCO57_RS17025;product=triose-phosphate isomerase;protein_id=WP_001216336.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 52653 53957 . - . ID=gene-CCO57_RS17030;Name=CCO57_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17030;old_locus_tag=CCO57_17010 NZ_NPMC01000010.1 Protein Homology CDS 52653 53957 . - 0 ID=cds-WP_000061007.1;Parent=gene-CCO57_RS17030;Dbxref=GenBank:WP_000061007.1;Name=WP_000061007.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=CCO57_RS17030;product=SLC13 family permease;protein_id=WP_000061007.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 54055 54777 . - . ID=gene-CCO57_RS17035;Name=CCO57_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17035;old_locus_tag=CCO57_17015 NZ_NPMC01000010.1 Protein Homology CDS 54055 54777 . - 0 ID=cds-WP_001535809.1;Parent=gene-CCO57_RS17035;Dbxref=GenBank:WP_001535809.1;Name=WP_001535809.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=CCO57_RS17035;product=GntR family transcriptional regulator;protein_id=WP_001535809.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 54840 55880 . - . ID=gene-CCO57_RS17040;Name=CCO57_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17040;old_locus_tag=CCO57_17020 NZ_NPMC01000010.1 Protein Homology CDS 54840 55880 . - 0 ID=cds-WP_000557882.1;Parent=gene-CCO57_RS17040;Dbxref=GenBank:WP_000557882.1;Name=WP_000557882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=CCO57_RS17040;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557882.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 55890 56849 . - . ID=gene-CCO57_RS17045;Name=CCO57_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17045;old_locus_tag=CCO57_17025 NZ_NPMC01000010.1 Protein Homology CDS 55890 56849 . - 0 ID=cds-WP_031570708.1;Parent=gene-CCO57_RS17045;Dbxref=GenBank:WP_031570708.1;Name=WP_031570708.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=CCO57_RS17045;product=aminoimidazole riboside kinase;protein_id=WP_031570708.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 56860 58194 . - . ID=gene-CCO57_RS17050;Name=CCO57_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17050;old_locus_tag=CCO57_17030 NZ_NPMC01000010.1 Protein Homology CDS 56860 58194 . - 0 ID=cds-WP_000777308.1;Parent=gene-CCO57_RS17050;Dbxref=GenBank:WP_000777308.1;Name=WP_000777308.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=CCO57_RS17050;product=MFS transporter;protein_id=WP_000777308.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 58457 59212 . - . ID=gene-CCO57_RS17055;Name=CCO57_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17055;old_locus_tag=CCO57_17035 NZ_NPMC01000010.1 Protein Homology CDS 58457 59212 . - 0 ID=cds-WP_000750757.1;Parent=gene-CCO57_RS17055;Dbxref=GenBank:WP_000750757.1;Name=WP_000750757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO57_RS17055;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750757.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 59313 60302 . - . ID=gene-CCO57_RS17060;Name=CCO57_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17060;old_locus_tag=CCO57_17040 NZ_NPMC01000010.1 Protein Homology CDS 59313 60302 . - 0 ID=cds-WP_000758706.1;Parent=gene-CCO57_RS17060;Dbxref=GenBank:WP_000758706.1;Name=WP_000758706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=CCO57_RS17060;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758706.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 60506 61468 . - . ID=gene-CCO57_RS17065;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CCO57_RS17065;old_locus_tag=CCO57_17045 NZ_NPMC01000010.1 Protein Homology CDS 60506 61468 . - 0 ID=cds-WP_000591793.1;Parent=gene-CCO57_RS17065;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=CCO57_RS17065;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 61653 62555 . - . ID=gene-CCO57_RS17070;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=CCO57_RS17070;old_locus_tag=CCO57_17050 NZ_NPMC01000010.1 Protein Homology CDS 61653 62555 . - 0 ID=cds-WP_001077321.1;Parent=gene-CCO57_RS17070;Dbxref=GenBank:WP_001077321.1;Name=WP_001077321.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=CCO57_RS17070;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077321.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 62842 63249 . + . ID=gene-CCO57_RS17075;Name=CCO57_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17075;old_locus_tag=CCO57_17055 NZ_NPMC01000010.1 Protein Homology CDS 62842 63249 . + 0 ID=cds-WP_023253864.1;Parent=gene-CCO57_RS17075;Dbxref=GenBank:WP_023253864.1;Name=WP_023253864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506499.1;locus_tag=CCO57_RS17075;product=hypothetical protein;protein_id=WP_023253864.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 63300 63518 . - . ID=gene-CCO57_RS17080;Name=CCO57_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17080;old_locus_tag=CCO57_17060 NZ_NPMC01000010.1 Protein Homology CDS 63300 63518 . - 0 ID=cds-WP_000468311.1;Parent=gene-CCO57_RS17080;Dbxref=GenBank:WP_000468311.1;Name=WP_000468311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416586.1;locus_tag=CCO57_RS17080;product=DNA-binding transcriptional regulator;protein_id=WP_000468311.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 63596 64765 . - . ID=gene-CCO57_RS17085;Name=CCO57_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17085;old_locus_tag=CCO57_17065 NZ_NPMC01000010.1 Protein Homology CDS 63596 64765 . - 0 ID=cds-WP_023253865.1;Parent=gene-CCO57_RS17085;Dbxref=GenBank:WP_023253865.1;Name=WP_023253865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627818.1;locus_tag=CCO57_RS17085;product=phage late control D family protein;protein_id=WP_023253865.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 64762 65247 . - . ID=gene-CCO57_RS17090;Name=CCO57_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17090;old_locus_tag=CCO57_17070 NZ_NPMC01000010.1 Protein Homology CDS 64762 65247 . - 0 ID=cds-WP_000978862.1;Parent=gene-CCO57_RS17090;Dbxref=GenBank:WP_000978862.1;Name=WP_000978862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978862.1;locus_tag=CCO57_RS17090;product=phage tail protein;protein_id=WP_000978862.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 65262 67703 . - . ID=gene-CCO57_RS17095;Name=CCO57_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17095;old_locus_tag=CCO57_17075 NZ_NPMC01000010.1 Protein Homology CDS 65262 67703 . - 0 ID=cds-WP_023253866.1;Parent=gene-CCO57_RS17095;Dbxref=GenBank:WP_023253866.1;Name=WP_023253866.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069526.1;locus_tag=CCO57_RS17095;product=phage tail tape measure protein;protein_id=WP_023253866.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 67696 67833 . - . ID=gene-CCO57_RS17100;Name=CCO57_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17100;old_locus_tag=CCO57_17080 NZ_NPMC01000010.1 Protein Homology CDS 67696 67833 . - 0 ID=cds-WP_010835837.1;Parent=gene-CCO57_RS17100;Dbxref=GenBank:WP_010835837.1;Name=WP_010835837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959005.1;locus_tag=CCO57_RS17100;product=GpE family phage tail protein;protein_id=WP_010835837.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 67848 68183 . - . ID=gene-CCO57_RS17105;Name=CCO57_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17105;old_locus_tag=CCO57_17085 NZ_NPMC01000010.1 Protein Homology CDS 67848 68183 . - 0 ID=cds-WP_001029726.1;Parent=gene-CCO57_RS17105;Dbxref=GenBank:WP_001029726.1;Name=WP_001029726.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406359.1;locus_tag=CCO57_RS17105;product=phage tail assembly protein;protein_id=WP_001029726.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 68246 68764 . - . ID=gene-CCO57_RS17110;Name=CCO57_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17110;old_locus_tag=CCO57_17090 NZ_NPMC01000010.1 Protein Homology CDS 68246 68764 . - 0 ID=cds-WP_001207675.1;Parent=gene-CCO57_RS17110;Dbxref=GenBank:WP_001207675.1;Name=WP_001207675.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817465.1;locus_tag=CCO57_RS17110;product=phage major tail tube protein;protein_id=WP_001207675.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 68780 69967 . - . ID=gene-CCO57_RS17115;Name=CCO57_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17115;old_locus_tag=CCO57_17095 NZ_NPMC01000010.1 Protein Homology CDS 68780 69967 . - 0 ID=cds-WP_023253867.1;Parent=gene-CCO57_RS17115;Dbxref=GenBank:WP_023253867.1;Name=WP_023253867.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505045.1;locus_tag=CCO57_RS17115;product=phage tail sheath protein;protein_id=WP_023253867.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 70102 70629 . - . ID=gene-CCO57_RS17120;Name=CCO57_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17120;old_locus_tag=CCO57_17100 NZ_NPMC01000010.1 Protein Homology CDS 70102 70629 . - 0 ID=cds-WP_023253868.1;Parent=gene-CCO57_RS17120;Dbxref=GenBank:WP_023253868.1;Name=WP_023253868.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000972112.1;locus_tag=CCO57_RS17120;product=tail fiber assembly protein;protein_id=WP_023253868.1;transl_table=11 NZ_NPMC01000010.1 RefSeq pseudogene 71370 71690 . - . ID=gene-CCO57_RS24995;Name=CCO57_RS24995;end_range=71690,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24995;partial=true;pseudo=true;start_range=.,71370 NZ_NPMC01000010.1 Protein Homology CDS 71370 71690 . - 0 ID=cds-CCO57_RS24995;Parent=gene-CCO57_RS24995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=71690,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461186.1;locus_tag=CCO57_RS24995;partial=true;product=hypothetical protein;pseudo=true;start_range=.,71370;transl_table=11 NZ_NPMC01000010.1 RefSeq pseudogene 71745 71804 . - . ID=gene-CCO57_RS25000;Name=CCO57_RS25000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25000;partial=true;pseudo=true;start_range=.,71745 NZ_NPMC01000010.1 Protein Homology CDS 71745 71804 . - 0 ID=cds-CCO57_RS25000;Parent=gene-CCO57_RS25000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019062,GO:0046718;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: protein motif:HMM:NF015371.6;locus_tag=CCO57_RS25000;partial=true;product=tail fiber protein;pseudo=true;start_range=.,71745;transl_table=11 NZ_NPMC01000010.1 RefSeq pseudogene 71852 71921 . - . ID=gene-CCO57_RS25005;Name=CCO57_RS25005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25005;partial=true;pseudo=true;start_range=.,71852 NZ_NPMC01000010.1 Protein Homology CDS 71852 71921 . - 0 ID=cds-CCO57_RS25005;Parent=gene-CCO57_RS25005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019062,GO:0046718;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461186.1;locus_tag=CCO57_RS25005;partial=true;product=tail fiber protein;pseudo=true;start_range=.,71852;transl_table=11 NZ_NPMC01000010.1 RefSeq pseudogene 72009 72581 . - . ID=gene-CCO57_RS25010;Name=CCO57_RS25010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25010;partial=true;pseudo=true;start_range=.,72009 NZ_NPMC01000010.1 Protein Homology CDS 72009 72581 . - 0 ID=cds-CCO57_RS25010;Parent=gene-CCO57_RS25010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: protein motif:HMM:NF023985.6;locus_tag=CCO57_RS25010;partial=true;product=phage tail protein;pseudo=true;start_range=.,72009;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 72592 73122 . - . ID=gene-CCO57_RS17130;Name=CCO57_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17130;old_locus_tag=CCO57_17110 NZ_NPMC01000010.1 Protein Homology CDS 72592 73122 . - 0 ID=cds-WP_001000069.1;Parent=gene-CCO57_RS17130;Dbxref=GenBank:WP_001000069.1;Name=WP_001000069.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285325.1;locus_tag=CCO57_RS17130;product=phage tail protein I;protein_id=WP_001000069.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 73115 74023 . - . ID=gene-CCO57_RS17135;Name=CCO57_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17135;old_locus_tag=CCO57_17115 NZ_NPMC01000010.1 Protein Homology CDS 73115 74023 . - 0 ID=cds-WP_000246674.1;Parent=gene-CCO57_RS17135;Dbxref=GenBank:WP_000246674.1;Name=WP_000246674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246670.1;locus_tag=CCO57_RS17135;product=baseplate assembly protein;protein_id=WP_000246674.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 74030 74377 . - . ID=gene-CCO57_RS17140;Name=CCO57_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17140;old_locus_tag=CCO57_17120 NZ_NPMC01000010.1 Protein Homology CDS 74030 74377 . - 0 ID=cds-WP_024157127.1;Parent=gene-CCO57_RS17140;Dbxref=GenBank:WP_024157127.1;Name=WP_024157127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550203.1;locus_tag=CCO57_RS17140;product=GPW/gp25 family protein;protein_id=WP_024157127.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 74374 75015 . - . ID=gene-CCO57_RS17145;Name=CCO57_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17145;old_locus_tag=CCO57_17125 NZ_NPMC01000010.1 Protein Homology CDS 74374 75015 . - 0 ID=cds-WP_094915049.1;Parent=gene-CCO57_RS17145;Dbxref=GenBank:WP_094915049.1;Name=WP_094915049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505039.1;locus_tag=CCO57_RS17145;product=phage baseplate assembly protein V;protein_id=WP_094915049.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 75084 75533 . - . ID=gene-CCO57_RS17150;Name=CCO57_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17150;old_locus_tag=CCO57_17130 NZ_NPMC01000010.1 Protein Homology CDS 75084 75533 . - 0 ID=cds-WP_023253872.1;Parent=gene-CCO57_RS17150;Dbxref=GenBank:WP_023253872.1;Name=WP_023253872.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406368.1;locus_tag=CCO57_RS17150;product=phage virion morphogenesis protein;protein_id=WP_023253872.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 75526 75993 . - . ID=gene-CCO57_RS17155;Name=CCO57_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17155;old_locus_tag=CCO57_17135 NZ_NPMC01000010.1 Protein Homology CDS 75526 75993 . - 0 ID=cds-WP_001169074.1;Parent=gene-CCO57_RS17155;Dbxref=GenBank:WP_001169074.1;Name=WP_001169074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001416708.1;locus_tag=CCO57_RS17155;product=phage tail protein;protein_id=WP_001169074.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 75956 76201 . - . ID=gene-CCO57_RS17160;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO57_RS17160;old_locus_tag=CCO57_17140 NZ_NPMC01000010.1 Protein Homology CDS 75956 76201 . - 0 ID=cds-WP_232093674.1;Parent=gene-CCO57_RS17160;Dbxref=GenBank:WP_232093674.1;Name=WP_232093674.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703019.1;locus_tag=CCO57_RS17160;product=Rz1-like lysis system protein LysC;protein_id=WP_232093674.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 76101 76514 . - . ID=gene-CCO57_RS17165;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=CCO57_RS17165;old_locus_tag=CCO57_17145 NZ_NPMC01000010.1 Protein Homology CDS 76101 76514 . - 0 ID=cds-WP_023253875.1;Parent=gene-CCO57_RS17165;Dbxref=GenBank:WP_023253875.1;Name=WP_023253875.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550198.1;locus_tag=CCO57_RS17165;product=Rz-like lysis system protein LysB;protein_id=WP_023253875.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 76511 77008 . - . ID=gene-CCO57_RS17170;Name=CCO57_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17170;old_locus_tag=CCO57_17150 NZ_NPMC01000010.1 Protein Homology CDS 76511 77008 . - 0 ID=cds-WP_023253876.1;Parent=gene-CCO57_RS17170;Dbxref=GenBank:WP_023253876.1;Name=WP_023253876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235441.1;locus_tag=CCO57_RS17170;product=glycoside hydrolase family 24 protein;protein_id=WP_023253876.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 76995 77291 . - . ID=gene-CCO57_RS17175;Name=CCO57_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17175;old_locus_tag=CCO57_17155 NZ_NPMC01000010.1 Protein Homology CDS 76995 77291 . - 0 ID=cds-WP_001583825.1;Parent=gene-CCO57_RS17175;Dbxref=GenBank:WP_001583825.1;Name=WP_001583825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134660.1;locus_tag=CCO57_RS17175;product=phage holin family protein;protein_id=WP_001583825.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 77295 77498 . - . ID=gene-CCO57_RS17180;Name=CCO57_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17180;old_locus_tag=CCO57_17160 NZ_NPMC01000010.1 Protein Homology CDS 77295 77498 . - 0 ID=cds-WP_010835754.1;Parent=gene-CCO57_RS17180;Dbxref=GenBank:WP_010835754.1;Name=WP_010835754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973898.1;locus_tag=CCO57_RS17180;product=tail protein X;protein_id=WP_010835754.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 77498 78004 . - . ID=gene-CCO57_RS17185;Name=CCO57_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17185;old_locus_tag=CCO57_17165 NZ_NPMC01000010.1 Protein Homology CDS 77498 78004 . - 0 ID=cds-WP_001583823.1;Parent=gene-CCO57_RS17185;Dbxref=GenBank:WP_001583823.1;Name=WP_001583823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000207472.1;locus_tag=CCO57_RS17185;product=head completion/stabilization protein;protein_id=WP_001583823.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 78098 78847 . - . ID=gene-CCO57_RS17190;Name=CCO57_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17190;old_locus_tag=CCO57_17170 NZ_NPMC01000010.1 Protein Homology CDS 78098 78847 . - 0 ID=cds-WP_023253877.1;Parent=gene-CCO57_RS17190;Dbxref=GenBank:WP_023253877.1;Name=WP_023253877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526222.1;locus_tag=CCO57_RS17190;product=terminase endonuclease subunit;protein_id=WP_023253877.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 78851 79918 . - . ID=gene-CCO57_RS17195;Name=CCO57_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17195;old_locus_tag=CCO57_17175 NZ_NPMC01000010.1 Protein Homology CDS 78851 79918 . - 0 ID=cds-WP_023253878.1;Parent=gene-CCO57_RS17195;Dbxref=GenBank:WP_023253878.1;Name=WP_023253878.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550193.1;locus_tag=CCO57_RS17195;product=phage major capsid protein%2C P2 family;protein_id=WP_023253878.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 79995 80849 . - . ID=gene-CCO57_RS17200;Name=CCO57_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17200;old_locus_tag=CCO57_17180 NZ_NPMC01000010.1 Protein Homology CDS 79995 80849 . - 0 ID=cds-WP_094915050.1;Parent=gene-CCO57_RS17200;Dbxref=GenBank:WP_094915050.1;Name=WP_094915050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228318.1;locus_tag=CCO57_RS17200;product=GPO family capsid scaffolding protein;protein_id=WP_094915050.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 81015 82784 . + . ID=gene-CCO57_RS17205;Name=CCO57_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17205;old_locus_tag=CCO57_17185 NZ_NPMC01000010.1 Protein Homology CDS 81015 82784 . + 0 ID=cds-WP_023253879.1;Parent=gene-CCO57_RS17205;Dbxref=GenBank:WP_023253879.1;Name=WP_023253879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001394637.1;locus_tag=CCO57_RS17205;product=terminase ATPase subunit family protein;protein_id=WP_023253879.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 82784 83830 . + . ID=gene-CCO57_RS17210;Name=CCO57_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17210;old_locus_tag=CCO57_17190 NZ_NPMC01000010.1 Protein Homology CDS 82784 83830 . + 0 ID=cds-WP_000517958.1;Parent=gene-CCO57_RS17210;Dbxref=GenBank:WP_000517958.1;Name=WP_000517958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530896.1;locus_tag=CCO57_RS17210;product=phage portal protein;protein_id=WP_000517958.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 84188 86059 . + . ID=gene-CCO57_RS17215;Name=CCO57_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17215;old_locus_tag=CCO57_17195 NZ_NPMC01000010.1 Protein Homology CDS 84188 86059 . + 0 ID=cds-WP_061375788.1;Parent=gene-CCO57_RS17215;Dbxref=GenBank:WP_061375788.1;Name=WP_061375788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695619.1;locus_tag=CCO57_RS17215;product=DUF262 domain-containing protein;protein_id=WP_061375788.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 86180 88444 . - . ID=gene-CCO57_RS17220;Name=CCO57_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17220;old_locus_tag=CCO57_17200 NZ_NPMC01000010.1 Protein Homology CDS 86180 88444 . - 0 ID=cds-WP_094915051.1;Parent=gene-CCO57_RS17220;Dbxref=GenBank:WP_094915051.1;Name=WP_094915051.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695618.1;locus_tag=CCO57_RS17220;product=replication endonuclease;protein_id=WP_094915051.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 88434 88709 . - . ID=gene-CCO57_RS17225;Name=CCO57_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17225;old_locus_tag=CCO57_17205 NZ_NPMC01000010.1 Protein Homology CDS 88434 88709 . - 0 ID=cds-WP_000027664.1;Parent=gene-CCO57_RS17225;Dbxref=GenBank:WP_000027664.1;Name=WP_000027664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027668.1;locus_tag=CCO57_RS17225;product=DUF5405 family protein;protein_id=WP_000027664.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 88706 88930 . - . ID=gene-CCO57_RS17230;Name=CCO57_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17230;old_locus_tag=CCO57_17210 NZ_NPMC01000010.1 Protein Homology CDS 88706 88930 . - 0 ID=cds-WP_001113264.1;Parent=gene-CCO57_RS17230;Dbxref=GenBank:WP_001113264.1;Name=WP_001113264.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242005.1;locus_tag=CCO57_RS17230;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_001113264.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 88933 89232 . - . ID=gene-CCO57_RS17235;Name=CCO57_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17235;old_locus_tag=CCO57_17215 NZ_NPMC01000010.1 Protein Homology CDS 88933 89232 . - 0 ID=cds-WP_001277898.1;Parent=gene-CCO57_RS17235;Dbxref=GenBank:WP_001277898.1;Name=WP_001277898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277891.1;locus_tag=CCO57_RS17235;product=DUF5405 family protein;protein_id=WP_001277898.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 89232 89456 . - . ID=gene-CCO57_RS17240;Name=CCO57_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17240;old_locus_tag=CCO57_17220 NZ_NPMC01000010.1 Protein Homology CDS 89232 89456 . - 0 ID=cds-WP_061375791.1;Parent=gene-CCO57_RS17240;Dbxref=GenBank:WP_061375791.1;Name=WP_061375791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236090.1;locus_tag=CCO57_RS17240;product=DUF2732 family protein;protein_id=WP_061375791.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 89520 90020 . - . ID=gene-CCO57_RS17245;Name=CCO57_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17245;old_locus_tag=CCO57_17225 NZ_NPMC01000010.1 Protein Homology CDS 89520 90020 . - 0 ID=cds-WP_000217677.1;Parent=gene-CCO57_RS17245;Dbxref=GenBank:WP_000217677.1;Name=WP_000217677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441883.1;locus_tag=CCO57_RS17245;product=hypothetical protein;protein_id=WP_000217677.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 90190 90462 . - . ID=gene-CCO57_RS17250;Name=CCO57_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17250;old_locus_tag=CCO57_17230 NZ_NPMC01000010.1 Protein Homology CDS 90190 90462 . - 0 ID=cds-WP_001308179.1;Parent=gene-CCO57_RS17250;Dbxref=GenBank:WP_001308179.1;Name=WP_001308179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369289.1;locus_tag=CCO57_RS17250;product=Cox family DNA-binding protein;protein_id=WP_001308179.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 90599 90892 . + . ID=gene-CCO57_RS17255;Name=CCO57_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17255;old_locus_tag=CCO57_17235 NZ_NPMC01000010.1 Protein Homology CDS 90599 90892 . + 0 ID=cds-WP_000777029.1;Parent=gene-CCO57_RS17255;Dbxref=GenBank:WP_000777029.1;Name=WP_000777029.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016237179.1;locus_tag=CCO57_RS17255;product=helix-turn-helix domain-containing protein;protein_id=WP_000777029.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 90962 91942 . + . ID=gene-CCO57_RS17260;Name=CCO57_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17260;old_locus_tag=CCO57_17240 NZ_NPMC01000010.1 Protein Homology CDS 90962 91942 . + 0 ID=cds-WP_000985246.1;Parent=gene-CCO57_RS17260;Dbxref=GenBank:WP_000985246.1;Name=WP_000985246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985242.1;locus_tag=CCO57_RS17260;product=phage integrase;protein_id=WP_000985246.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 92128 92628 . - . ID=gene-CCO57_RS17265;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=CCO57_RS17265;old_locus_tag=CCO57_17245 NZ_NPMC01000010.1 Protein Homology CDS 92128 92628 . - 0 ID=cds-WP_001233463.1;Parent=gene-CCO57_RS17265;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=CCO57_RS17265;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 92779 93477 . + . ID=gene-CCO57_RS17270;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=CCO57_RS17270;old_locus_tag=CCO57_17250 NZ_NPMC01000010.1 Protein Homology CDS 92779 93477 . + 0 ID=cds-WP_001033731.1;Parent=gene-CCO57_RS17270;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=CCO57_RS17270;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 93474 94847 . + . ID=gene-CCO57_RS17275;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=CCO57_RS17275;old_locus_tag=CCO57_17255 NZ_NPMC01000010.1 Protein Homology CDS 93474 94847 . + 0 ID=cds-WP_000580402.1;Parent=gene-CCO57_RS17275;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=CCO57_RS17275;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 94898 95293 . - . ID=gene-CCO57_RS17280;Name=CCO57_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17280;old_locus_tag=CCO57_17260 NZ_NPMC01000010.1 Protein Homology CDS 94898 95293 . - 0 ID=cds-WP_000133441.1;Parent=gene-CCO57_RS17280;Dbxref=GenBank:WP_000133441.1;Name=WP_000133441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=CCO57_RS17280;product=nuclear transport factor 2 family protein;protein_id=WP_000133441.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 95305 95994 . - . ID=gene-CCO57_RS17285;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=CCO57_RS17285;old_locus_tag=CCO57_17265 NZ_NPMC01000010.1 Protein Homology CDS 95305 95994 . - 0 ID=cds-WP_000559227.1;Parent=gene-CCO57_RS17285;Dbxref=GenBank:WP_000559227.1;Name=WP_000559227.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=CCO57_RS17285;product=6-hydroxyaminopurine reductase;protein_id=WP_000559227.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 96064 96684 . - . ID=gene-CCO57_RS17290;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=CCO57_RS17290;old_locus_tag=CCO57_17270 NZ_NPMC01000010.1 Protein Homology CDS 96064 96684 . - 0 ID=cds-WP_000122628.1;Parent=gene-CCO57_RS17290;Dbxref=GenBank:WP_000122628.1;Name=WP_000122628.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=CCO57_RS17290;product=superoxide dismutase [Mn];protein_id=WP_000122628.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 97013 97996 . + . ID=gene-CCO57_RS17295;Name=CCO57_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17295;old_locus_tag=CCO57_17275 NZ_NPMC01000010.1 Protein Homology CDS 97013 97996 . + 0 ID=cds-WP_000812816.1;Parent=gene-CCO57_RS17295;Dbxref=GenBank:WP_000812816.1;Name=WP_000812816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=CCO57_RS17295;product=TRAP transporter substrate-binding protein;protein_id=WP_000812816.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 98015 98530 . + . ID=gene-CCO57_RS17300;Name=CCO57_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17300;old_locus_tag=CCO57_17280 NZ_NPMC01000010.1 Protein Homology CDS 98015 98530 . + 0 ID=cds-WP_001091413.1;Parent=gene-CCO57_RS17300;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=CCO57_RS17300;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 98523 99830 . + . ID=gene-CCO57_RS17305;Name=CCO57_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17305;old_locus_tag=CCO57_17285 NZ_NPMC01000010.1 Protein Homology CDS 98523 99830 . + 0 ID=cds-WP_000566800.1;Parent=gene-CCO57_RS17305;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=CCO57_RS17305;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 99988 100671 . - . ID=gene-CCO57_RS17310;Name=CCO57_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17310;old_locus_tag=CCO57_17290 NZ_NPMC01000010.1 Protein Homology CDS 99988 100671 . - 0 ID=cds-WP_000378721.1;Parent=gene-CCO57_RS17310;Dbxref=GenBank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=CCO57_RS17310;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 101290 102324 . + . ID=gene-CCO57_RS17315;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=CCO57_RS17315;old_locus_tag=CCO57_17295 NZ_NPMC01000010.1 Protein Homology CDS 101290 102324 . + 0 ID=cds-WP_000063541.1;Parent=gene-CCO57_RS17315;Dbxref=GenBank:WP_000063541.1;Name=WP_000063541.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=CCO57_RS17315;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063541.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 102321 103169 . - . ID=gene-CCO57_RS17320;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=CCO57_RS17320;old_locus_tag=CCO57_17300 NZ_NPMC01000010.1 Protein Homology CDS 102321 103169 . - 0 ID=cds-WP_094915052.1;Parent=gene-CCO57_RS17320;Dbxref=GenBank:WP_094915052.1;Name=WP_094915052.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=CCO57_RS17320;product=HTH-type transcriptional activator RhaR;protein_id=WP_094915052.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 103322 104158 . - . ID=gene-CCO57_RS17325;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=CCO57_RS17325;old_locus_tag=CCO57_17305 NZ_NPMC01000010.1 Protein Homology CDS 103322 104158 . - 0 ID=cds-WP_000217116.1;Parent=gene-CCO57_RS17325;Dbxref=GenBank:WP_000217116.1;Name=WP_000217116.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=CCO57_RS17325;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217116.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 104446 105915 . + . ID=gene-CCO57_RS17330;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=CCO57_RS17330;old_locus_tag=CCO57_17310 NZ_NPMC01000010.1 Protein Homology CDS 104446 105915 . + 0 ID=cds-WP_000143979.1;Parent=gene-CCO57_RS17330;Dbxref=GenBank:WP_000143979.1;Name=WP_000143979.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=CCO57_RS17330;product=rhamnulokinase;protein_id=WP_000143979.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 105912 107171 . + . ID=gene-CCO57_RS17335;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=CCO57_RS17335;old_locus_tag=CCO57_17315 NZ_NPMC01000010.1 Protein Homology CDS 105912 107171 . + 0 ID=cds-WP_000211473.1;Parent=gene-CCO57_RS17335;Dbxref=GenBank:WP_000211473.1;Name=WP_000211473.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=CCO57_RS17335;product=L-rhamnose isomerase;protein_id=WP_000211473.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 107314 108141 . + . ID=gene-CCO57_RS17340;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=CCO57_RS17340;old_locus_tag=CCO57_17320 NZ_NPMC01000010.1 Protein Homology CDS 107314 108141 . + 0 ID=cds-WP_001179696.1;Parent=gene-CCO57_RS17340;Dbxref=GenBank:WP_001179696.1;Name=WP_001179696.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=CCO57_RS17340;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179696.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 108267 109415 . + . ID=gene-CCO57_RS17345;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO57_RS17345;old_locus_tag=CCO57_17325 NZ_NPMC01000010.1 Protein Homology CDS 108267 109415 . + 0 ID=cds-WP_000009253.1;Parent=gene-CCO57_RS17345;Dbxref=GenBank:WP_000009253.1;Name=WP_000009253.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=CCO57_RS17345;product=lactaldehyde reductase;protein_id=WP_000009253.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 109412 109726 . + . ID=gene-CCO57_RS17350;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=CCO57_RS17350;old_locus_tag=CCO57_17330 NZ_NPMC01000010.1 Protein Homology CDS 109412 109726 . + 0 ID=cds-WP_000619478.1;Parent=gene-CCO57_RS17350;Dbxref=GenBank:WP_000619478.1;Name=WP_000619478.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=CCO57_RS17350;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 109815 110363 . - . ID=gene-CCO57_RS17355;Name=CCO57_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17355;old_locus_tag=CCO57_17335 NZ_NPMC01000010.1 Protein Homology CDS 109815 110363 . - 0 ID=cds-WP_001517951.1;Parent=gene-CCO57_RS17355;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=CCO57_RS17355;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 110464 111123 . + . ID=gene-CCO57_RS17360;Name=CCO57_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17360;old_locus_tag=CCO57_17340 NZ_NPMC01000010.1 Protein Homology CDS 110464 111123 . + 0 ID=cds-WP_000683586.1;Parent=gene-CCO57_RS17360;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=CCO57_RS17360;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 111123 111446 . + . ID=gene-CCO57_RS17365;Name=CCO57_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17365;old_locus_tag=CCO57_17345 NZ_NPMC01000010.1 Protein Homology CDS 111123 111446 . + 0 ID=cds-WP_000527677.1;Parent=gene-CCO57_RS17365;Dbxref=GenBank:WP_000527677.1;Name=WP_000527677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=CCO57_RS17365;product=AzlD domain-containing protein;protein_id=WP_000527677.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 111802 112902 . - . ID=gene-CCO57_RS17370;Name=CCO57_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17370;old_locus_tag=CCO57_17350 NZ_NPMC01000010.1 Protein Homology CDS 111802 112902 . - 0 ID=cds-WP_031570680.1;Parent=gene-CCO57_RS17370;Dbxref=GenBank:WP_031570680.1;Name=WP_031570680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=CCO57_RS17370;product=YiiG family protein;protein_id=WP_031570680.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 113095 113931 . - . ID=gene-CCO57_RS17375;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CCO57_RS17375;old_locus_tag=CCO57_17355 NZ_NPMC01000010.1 Protein Homology CDS 113095 113931 . - 0 ID=cds-WP_001059735.1;Parent=gene-CCO57_RS17375;Dbxref=GenBank:WP_001059735.1;Name=WP_001059735.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=CCO57_RS17375;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059735.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 114126 117176 . + . ID=gene-CCO57_RS17385;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO57_RS17385;old_locus_tag=CCO57_17365 NZ_NPMC01000010.1 Protein Homology CDS 114126 117176 . + 0 ID=cds-WP_077248424.1;Parent=gene-CCO57_RS17385;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=CCO57_RS17385;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:114711..114713%2Caa:Sec);transl_table=11 NZ_NPMC01000010.1 RefSeq gene 117189 118091 . + . ID=gene-CCO57_RS17390;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO57_RS17390;old_locus_tag=CCO57_17370 NZ_NPMC01000010.1 Protein Homology CDS 117189 118091 . + 0 ID=cds-WP_000331361.1;Parent=gene-CCO57_RS17390;Dbxref=GenBank:WP_000331361.1;Name=WP_000331361.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=CCO57_RS17390;product=formate dehydrogenase subunit beta;protein_id=WP_000331361.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 118088 118723 . + . ID=gene-CCO57_RS17395;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=CCO57_RS17395;old_locus_tag=CCO57_17375 NZ_NPMC01000010.1 Protein Homology CDS 118088 118723 . + 0 ID=cds-WP_000829025.1;Parent=gene-CCO57_RS17395;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=CCO57_RS17395;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 118720 119649 . + . ID=gene-CCO57_RS17400;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=CCO57_RS17400;old_locus_tag=CCO57_17380 NZ_NPMC01000010.1 Protein Homology CDS 118720 119649 . + 0 ID=cds-WP_000027730.1;Parent=gene-CCO57_RS17400;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=CCO57_RS17400;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 119696 119986 . - . ID=gene-CCO57_RS17405;Name=CCO57_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17405;old_locus_tag=CCO57_17385 NZ_NPMC01000010.1 Protein Homology CDS 119696 119986 . - 0 ID=cds-WP_000362050.1;Parent=gene-CCO57_RS17405;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=CCO57_RS17405;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 119987 120298 . - . ID=gene-CCO57_RS17410;Name=CCO57_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17410;old_locus_tag=CCO57_17390 NZ_NPMC01000010.1 Protein Homology CDS 119987 120298 . - 0 ID=cds-WP_001159631.1;Parent=gene-CCO57_RS17410;Dbxref=GenBank:WP_001159631.1;Name=WP_001159631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=CCO57_RS17410;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159631.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 120516 121445 . + . ID=gene-CCO57_RS17415;Name=CCO57_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17415;old_locus_tag=CCO57_17395 NZ_NPMC01000010.1 Protein Homology CDS 120516 121445 . + 0 ID=cds-WP_001127698.1;Parent=gene-CCO57_RS17415;Dbxref=GenBank:WP_001127698.1;Name=WP_001127698.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=CCO57_RS17415;product=alpha/beta hydrolase;protein_id=WP_001127698.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 121531 121842 . + . ID=gene-CCO57_RS17420;Name=CCO57_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17420;old_locus_tag=CCO57_17400 NZ_NPMC01000010.1 Protein Homology CDS 121531 121842 . + 0 ID=cds-WP_000558166.1;Parent=gene-CCO57_RS17420;Dbxref=GenBank:WP_000558166.1;Name=WP_000558166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=CCO57_RS17420;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558166.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 121839 122285 . + . ID=gene-CCO57_RS17425;Name=CCO57_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17425;old_locus_tag=CCO57_17405 NZ_NPMC01000010.1 Protein Homology CDS 121839 122285 . + 0 ID=cds-WP_001259009.1;Parent=gene-CCO57_RS17425;Dbxref=GenBank:WP_001259009.1;Name=WP_001259009.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=CCO57_RS17425;product=helix-turn-helix domain-containing protein;protein_id=WP_001259009.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 122300 123241 . - . ID=gene-CCO57_RS17430;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=CCO57_RS17430;old_locus_tag=CCO57_17410 NZ_NPMC01000010.1 Protein Homology CDS 122300 123241 . - 0 ID=cds-WP_001518251.1;Parent=gene-CCO57_RS17430;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=CCO57_RS17430;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 123286 123723 . - . ID=gene-CCO57_RS17435;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CCO57_RS17435;old_locus_tag=CCO57_17415 NZ_NPMC01000010.1 Protein Homology CDS 123286 123723 . - 0 ID=cds-WP_000560974.1;Parent=gene-CCO57_RS17435;Dbxref=GenBank:WP_000560974.1;Name=WP_000560974.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=CCO57_RS17435;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560974.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 123720 124592 . - . ID=gene-CCO57_RS17440;Name=CCO57_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17440;old_locus_tag=CCO57_17420 NZ_NPMC01000010.1 Protein Homology CDS 123720 124592 . - 0 ID=cds-WP_000921423.1;Parent=gene-CCO57_RS17440;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=CCO57_RS17440;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 124586 125185 . - . ID=gene-CCO57_RS17445;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=CCO57_RS17445;old_locus_tag=CCO57_17425 NZ_NPMC01000010.1 Protein Homology CDS 124586 125185 . - 0 ID=cds-WP_000965695.1;Parent=gene-CCO57_RS17445;Dbxref=GenBank:WP_000965695.1;Name=WP_000965695.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=CCO57_RS17445;product=glucose-1-phosphatase;protein_id=WP_000965695.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 125376 126179 . - . ID=gene-CCO57_RS17450;Name=CCO57_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17450;old_locus_tag=CCO57_17430 NZ_NPMC01000010.1 Protein Homology CDS 125376 126179 . - 0 ID=cds-WP_000059693.1;Parent=gene-CCO57_RS17450;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=CCO57_RS17450;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 126213 127109 . - . ID=gene-CCO57_RS17455;Name=CCO57_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17455;old_locus_tag=CCO57_17435 NZ_NPMC01000010.1 Protein Homology CDS 126213 127109 . - 0 ID=cds-WP_001520529.1;Parent=gene-CCO57_RS17455;Dbxref=GenBank:WP_001520529.1;Name=WP_001520529.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=CCO57_RS17455;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 127274 128170 . + . ID=gene-CCO57_RS17460;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=CCO57_RS17460;old_locus_tag=CCO57_17440 NZ_NPMC01000010.1 Protein Homology CDS 127274 128170 . + 0 ID=cds-WP_000268241.1;Parent=gene-CCO57_RS17460;Dbxref=GenBank:WP_000268241.1;Name=WP_000268241.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=CCO57_RS17460;product=sulfolactaldehyde 3-reductase;protein_id=WP_000268241.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 128193 129071 . + . ID=gene-CCO57_RS17465;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=CCO57_RS17465;old_locus_tag=CCO57_17445 NZ_NPMC01000010.1 Protein Homology CDS 128193 129071 . + 0 ID=cds-WP_094915053.1;Parent=gene-CCO57_RS17465;Dbxref=GenBank:WP_094915053.1;Name=WP_094915053.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=CCO57_RS17465;product=sulfofructosephosphate aldolase;protein_id=WP_094915053.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 129087 130328 . + . ID=gene-CCO57_RS17470;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=CCO57_RS17470;old_locus_tag=CCO57_17450 NZ_NPMC01000010.1 Protein Homology CDS 129087 130328 . + 0 ID=cds-WP_000870934.1;Parent=gene-CCO57_RS17470;Dbxref=GenBank:WP_000870934.1;Name=WP_000870934.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=CCO57_RS17470;product=sulfoquinovose isomerase;protein_id=WP_000870934.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 130332 131189 . + . ID=gene-CCO57_RS17475;Name=CCO57_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17475;old_locus_tag=CCO57_17455 NZ_NPMC01000010.1 Protein Homology CDS 130332 131189 . + 0 ID=cds-WP_023230959.1;Parent=gene-CCO57_RS17475;Dbxref=GenBank:WP_023230959.1;Name=WP_023230959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=CCO57_RS17475;product=aldose-1-epimerase;protein_id=WP_023230959.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 131233 133269 . + . ID=gene-CCO57_RS17480;Name=CCO57_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17480;old_locus_tag=CCO57_17460 NZ_NPMC01000010.1 Protein Homology CDS 131233 133269 . + 0 ID=cds-WP_094915054.1;Parent=gene-CCO57_RS17480;Dbxref=GenBank:WP_094915054.1;Name=WP_094915054.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=CCO57_RS17480;product=alpha-glucosidase;protein_id=WP_094915054.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 133315 134697 . + . ID=gene-CCO57_RS17485;Name=CCO57_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17485;old_locus_tag=CCO57_17465 NZ_NPMC01000010.1 Protein Homology CDS 133315 134697 . + 0 ID=cds-WP_000084245.1;Parent=gene-CCO57_RS17485;Dbxref=GenBank:WP_000084245.1;Name=WP_000084245.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=CCO57_RS17485;product=MFS transporter;protein_id=WP_000084245.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 134743 136164 . + . ID=gene-CCO57_RS17490;Name=CCO57_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17490;old_locus_tag=CCO57_17470 NZ_NPMC01000010.1 Protein Homology CDS 134743 136164 . + 0 ID=cds-WP_000064888.1;Parent=gene-CCO57_RS17490;Dbxref=GenBank:WP_000064888.1;Name=WP_000064888.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=CCO57_RS17490;product=MFS transporter;protein_id=WP_000064888.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 136232 136924 . + . ID=gene-CCO57_RS17495;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=CCO57_RS17495;old_locus_tag=CCO57_17475 NZ_NPMC01000010.1 Protein Homology CDS 136232 136924 . + 0 ID=cds-WP_000838829.1;Parent=gene-CCO57_RS17495;Dbxref=GenBank:WP_000838829.1;Name=WP_000838829.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=CCO57_RS17495;product=porin OmpL;protein_id=WP_000838829.1;transl_table=11 NZ_NPMC01000010.1 RefSeq pseudogene 137081 137187 . + . ID=gene-CCO57_RS24335;Name=CCO57_RS24335;end_range=137187,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24335;partial=true;pseudo=true NZ_NPMC01000010.1 Protein Homology CDS 137081 137187 . + 0 ID=cds-CCO57_RS24335;Parent=gene-CCO57_RS24335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=137187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=CCO57_RS24335;partial=true;product=STM4015 family protein;pseudo=true;transl_table=11 NZ_NPMC01000010.1 RefSeq pseudogene 137188 137259 . + . ID=gene-CCO57_RS24665;Name=CCO57_RS24665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24665;partial=true;pseudo=true;start_range=.,137188 NZ_NPMC01000010.1 Protein Homology CDS 137188 137259 . + 0 ID=cds-CCO57_RS24665;Parent=gene-CCO57_RS24665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=CCO57_RS24665;partial=true;product=hypothetical protein;pseudo=true;start_range=.,137188;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 137314 139137 . - . ID=gene-CCO57_RS17500;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CCO57_RS17500;old_locus_tag=CCO57_17480 NZ_NPMC01000010.1 Protein Homology CDS 137314 139137 . - 0 ID=cds-WP_000572064.1;Parent=gene-CCO57_RS17500;Dbxref=GenBank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=CCO57_RS17500;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 139513 140922 . + . ID=gene-CCO57_RS17510;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CCO57_RS17510;old_locus_tag=CCO57_17490 NZ_NPMC01000010.1 Protein Homology CDS 139513 140922 . + 0 ID=cds-WP_001271699.1;Parent=gene-CCO57_RS17510;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=CCO57_RS17510;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 141197 142246 . + . ID=gene-CCO57_RS17520;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=CCO57_RS17520;old_locus_tag=CCO57_17500 NZ_NPMC01000010.1 Protein Homology CDS 141197 142246 . + 0 ID=cds-WP_000146192.1;Parent=gene-CCO57_RS17520;Dbxref=GenBank:WP_000146192.1;Name=WP_000146192.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=CCO57_RS17520;product=nitrogen regulation protein NR(II);protein_id=WP_000146192.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 142255 143664 . + . ID=gene-CCO57_RS17525;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=CCO57_RS17525;old_locus_tag=CCO57_17505 NZ_NPMC01000010.1 Protein Homology CDS 142255 143664 . + 0 ID=cds-WP_001188782.1;Parent=gene-CCO57_RS17525;Dbxref=GenBank:WP_001188782.1;Name=WP_001188782.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=CCO57_RS17525;product=nitrogen regulation protein NR(I);protein_id=WP_001188782.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 143777 143887 . + . ID=gene-CCO57_RS17530;Name=CCO57_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17530;old_locus_tag=CCO57_17510 NZ_NPMC01000010.1 Protein Homology CDS 143777 143887 . + 0 ID=cds-WP_001578131.1;Parent=gene-CCO57_RS17530;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=CCO57_RS17530;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 143977 145350 . - . ID=gene-CCO57_RS17535;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=CCO57_RS17535;old_locus_tag=CCO57_17515 NZ_NPMC01000010.1 Protein Homology CDS 143977 145350 . - 0 ID=cds-WP_000003520.1;Parent=gene-CCO57_RS17535;Dbxref=GenBank:WP_000003520.1;Name=WP_000003520.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=CCO57_RS17535;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003520.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 145539 146054 . - . ID=gene-CCO57_RS17540;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=CCO57_RS17540;old_locus_tag=CCO57_17520 NZ_NPMC01000010.1 Protein Homology CDS 145539 146054 . - 0 ID=cds-WP_000743297.1;Parent=gene-CCO57_RS17540;Dbxref=GenBank:WP_000743297.1;Name=WP_000743297.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=CCO57_RS17540;product=Der GTPase-activating protein YihI;protein_id=WP_000743297.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 146173 146397 . - . ID=gene-CCO57_RS17545;Name=CCO57_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17545;old_locus_tag=CCO57_17525 NZ_NPMC01000010.1 Protein Homology CDS 146173 146397 . - 0 ID=cds-WP_001541209.1;Parent=gene-CCO57_RS17545;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=CCO57_RS17545;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 146636 147268 . + . ID=gene-CCO57_RS17550;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CCO57_RS17550;old_locus_tag=CCO57_17530 NZ_NPMC01000010.1 Protein Homology CDS 146636 147268 . + 0 ID=cds-WP_000183327.1;Parent=gene-CCO57_RS17550;Dbxref=GenBank:WP_000183327.1;Name=WP_000183327.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=CCO57_RS17550;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183327.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 147602 150388 . - . ID=gene-CCO57_RS17555;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CCO57_RS17555;old_locus_tag=CCO57_17535 NZ_NPMC01000010.1 Protein Homology CDS 147602 150388 . - 0 ID=cds-WP_000249960.1;Parent=gene-CCO57_RS17555;Dbxref=GenBank:WP_000249960.1;Name=WP_000249960.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=CCO57_RS17555;product=DNA polymerase I;protein_id=WP_000249960.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 150776 151684 . + . ID=gene-CCO57_RS17565;Name=CCO57_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17565;old_locus_tag=CCO57_17545 NZ_NPMC01000010.1 Protein Homology CDS 150776 151684 . + 0 ID=cds-WP_000196900.1;Parent=gene-CCO57_RS17565;Dbxref=GenBank:WP_000196900.1;Name=WP_000196900.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=CCO57_RS17565;product=acyltransferase;protein_id=WP_000196900.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 151697 152320 . - . ID=gene-CCO57_RS17570;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=CCO57_RS17570;old_locus_tag=CCO57_17550 NZ_NPMC01000010.1 Protein Homology CDS 151697 152320 . - 0 ID=cds-WP_000725364.1;Parent=gene-CCO57_RS17570;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=CCO57_RS17570;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 152337 153323 . - . ID=gene-CCO57_RS17575;Name=CCO57_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17575;old_locus_tag=CCO57_17555 NZ_NPMC01000010.1 Protein Homology CDS 152337 153323 . - 0 ID=cds-WP_000999260.1;Parent=gene-CCO57_RS17575;Dbxref=GenBank:WP_000999260.1;Name=WP_000999260.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=CCO57_RS17575;product=serine/threonine protein kinase;protein_id=WP_000999260.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 153400 153669 . - . ID=gene-CCO57_RS17580;Name=CCO57_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17580;old_locus_tag=CCO57_17560 NZ_NPMC01000010.1 Protein Homology CDS 153400 153669 . - 0 ID=cds-WP_000649858.1;Parent=gene-CCO57_RS17580;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=CCO57_RS17580;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 153739 154323 . + . ID=gene-CCO57_RS17585;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CCO57_RS17585;old_locus_tag=CCO57_17565 NZ_NPMC01000010.1 Protein Homology CDS 153739 154323 . + 0 ID=cds-WP_001046880.1;Parent=gene-CCO57_RS17585;Dbxref=GenBank:WP_001046880.1;Name=WP_001046880.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=CCO57_RS17585;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046880.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 154320 154835 . + . ID=gene-CCO57_RS17590;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CCO57_RS17590;old_locus_tag=CCO57_17570 NZ_NPMC01000010.1 Protein Homology CDS 154320 154835 . + 0 ID=cds-WP_076167072.1;Parent=gene-CCO57_RS17590;Dbxref=GenBank:WP_076167072.1;Name=WP_076167072.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=CCO57_RS17590;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_076167072.1;transl_table=11 NZ_NPMC01000010.1 RefSeq gene 155139 155254 . - . ID=gene-CCO57_RS17600;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO57_RS17600;old_locus_tag=CCO57_17580 NZ_NPMC01000010.1 cmsearch rRNA 155139 155254 . - . ID=rna-CCO57_RS17600;Parent=gene-CCO57_RS17600;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS17600;product=5S ribosomal RNA NZ_NPMC01000010.1 cmsearch exon 155139 155254 . - . ID=exon-CCO57_RS17600-1;Parent=rna-CCO57_RS17600;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS17600;product=5S ribosomal RNA NZ_NPMC01000010.1 RefSeq gene 155452 155554 . - . ID=gene-CCO57_RS17605;Name=CCO57_RS17605;end_range=155554,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS17605;old_locus_tag=CCO57_17585;partial=true NZ_NPMC01000010.1 cmsearch rRNA 155452 155554 . - . ID=rna-CCO57_RS17605;Parent=gene-CCO57_RS17605;Dbxref=RFAM:RF02541;end_range=155554,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS17605;partial=true;product=23S ribosomal RNA NZ_NPMC01000010.1 cmsearch exon 155452 155554 . - . ID=exon-CCO57_RS17605-1;Parent=rna-CCO57_RS17605;Dbxref=RFAM:RF02541;end_range=155554,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS17605;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPMC01000011.1 1 124870 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000011.1 RefSeq region 1 124870 . + . ID=NZ_NPMC01000011.1:1..124870;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000011.1 RefSeq pseudogene 187 312 . - . ID=gene-CCO57_RS24670;Name=CCO57_RS24670;end_range=312,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24670;partial=true;pseudo=true NZ_NPMC01000011.1 Protein Homology CDS 187 312 . - 0 ID=cds-CCO57_RS24670;Parent=gene-CCO57_RS24670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=312,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051190.1;locus_tag=CCO57_RS24670;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 296 850 . - . ID=gene-CCO57_RS24340;Name=CCO57_RS24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24340 NZ_NPMC01000011.1 GeneMarkS-2+ CDS 296 850 . - 0 ID=cds-WP_157725488.1;Parent=gene-CCO57_RS24340;Dbxref=GenBank:WP_157725488.1;Name=WP_157725488.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24340;product=hypothetical protein;protein_id=WP_157725488.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 1066 2229 . + . ID=gene-CCO57_RS17610;Name=CCO57_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17610;old_locus_tag=CCO57_17590 NZ_NPMC01000011.1 Protein Homology CDS 1066 2229 . + 0 ID=cds-WP_001642934.1;Parent=gene-CCO57_RS17610;Dbxref=GenBank:WP_001642934.1;Name=WP_001642934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=CCO57_RS17610;product=integrase;protein_id=WP_001642934.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 2245 2321 . - . ID=gene-CCO57_RS17615;Name=CCO57_RS17615;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS17615;old_locus_tag=CCO57_17595 NZ_NPMC01000011.1 tRNAscan-SE tRNA 2245 2321 . - . ID=rna-CCO57_RS17615;Parent=gene-CCO57_RS17615;anticodon=(pos:complement(2285..2287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS17615;product=tRNA-Arg NZ_NPMC01000011.1 tRNAscan-SE exon 2245 2321 . - . ID=exon-CCO57_RS17615-1;Parent=rna-CCO57_RS17615;anticodon=(pos:complement(2285..2287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS17615;product=tRNA-Arg NZ_NPMC01000011.1 RefSeq gene 2575 3171 . + . ID=gene-CCO57_RS17620;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=CCO57_RS17620;old_locus_tag=CCO57_17600 NZ_NPMC01000011.1 Protein Homology CDS 2575 3171 . + 0 ID=cds-WP_001523348.1;Parent=gene-CCO57_RS17620;Dbxref=GenBank:WP_001523348.1;Name=WP_001523348.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=CCO57_RS17620;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_001523348.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 3333 3644 . + . ID=gene-CCO57_RS17625;Name=CCO57_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17625;old_locus_tag=CCO57_17605 NZ_NPMC01000011.1 Protein Homology CDS 3333 3644 . + 0 ID=cds-WP_000226491.1;Parent=gene-CCO57_RS17625;Dbxref=GenBank:WP_000226491.1;Name=WP_000226491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=CCO57_RS17625;product=hypothetical protein;protein_id=WP_000226491.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 3663 4385 . + . ID=gene-CCO57_RS17630;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=CCO57_RS17630;old_locus_tag=CCO57_17610 NZ_NPMC01000011.1 Protein Homology CDS 3663 4385 . + 0 ID=cds-WP_001258112.1;Parent=gene-CCO57_RS17630;Dbxref=GenBank:WP_001258112.1;Name=WP_001258112.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=CCO57_RS17630;product=fimbria biosynthesis regulator FimY;protein_id=WP_001258112.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 4989 5621 . + . ID=gene-CCO57_RS17635;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=CCO57_RS17635;old_locus_tag=CCO57_17615 NZ_NPMC01000011.1 Protein Homology CDS 4989 5621 . + 0 ID=cds-WP_000801272.1;Parent=gene-CCO57_RS17635;Dbxref=GenBank:WP_000801272.1;Name=WP_000801272.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=CCO57_RS17635;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801272.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 5667 6185 . - . ID=gene-CCO57_RS17640;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=CCO57_RS17640;old_locus_tag=CCO57_17620 NZ_NPMC01000011.1 Protein Homology CDS 5667 6185 . - 0 ID=cds-WP_001642932.1;Parent=gene-CCO57_RS17640;Dbxref=GenBank:WP_001642932.1;Name=WP_001642932.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=CCO57_RS17640;product=fimbria assembly protein;protein_id=WP_001642932.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 6195 7202 . - . ID=gene-CCO57_RS17645;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=CCO57_RS17645;old_locus_tag=CCO57_17625 NZ_NPMC01000011.1 Protein Homology CDS 6195 7202 . - 0 ID=cds-WP_000708656.1;Parent=gene-CCO57_RS17645;Dbxref=GenBank:WP_000708656.1;Name=WP_000708656.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=CCO57_RS17645;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000708656.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 7217 9829 . - . ID=gene-CCO57_RS17650;Name=CCO57_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17650;old_locus_tag=CCO57_17630 NZ_NPMC01000011.1 Protein Homology CDS 7217 9829 . - 0 ID=cds-WP_094915055.1;Parent=gene-CCO57_RS17650;Dbxref=GenBank:WP_094915055.1;Name=WP_094915055.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=CCO57_RS17650;product=fimbrial biogenesis usher protein;protein_id=WP_094915055.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 9860 10552 . - . ID=gene-CCO57_RS17655;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=CCO57_RS17655;old_locus_tag=CCO57_17635 NZ_NPMC01000011.1 Protein Homology CDS 9860 10552 . - 0 ID=cds-WP_001519112.1;Parent=gene-CCO57_RS17655;Dbxref=GenBank:WP_001519112.1;Name=WP_001519112.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=CCO57_RS17655;product=type 1 fimbria chaperone FimC;protein_id=WP_001519112.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 10596 11129 . - . ID=gene-CCO57_RS17660;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=CCO57_RS17660;old_locus_tag=CCO57_17640 NZ_NPMC01000011.1 Protein Homology CDS 10596 11129 . - 0 ID=cds-WP_094915056.1;Parent=gene-CCO57_RS17660;Dbxref=GenBank:WP_094915056.1;Name=WP_094915056.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=CCO57_RS17660;product=type 1 fimbrial protein subunit FimI;protein_id=WP_094915056.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 11204 11761 . - . ID=gene-CCO57_RS17665;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=CCO57_RS17665;old_locus_tag=CCO57_17645 NZ_NPMC01000011.1 Protein Homology CDS 11204 11761 . - 0 ID=cds-WP_000681026.1;Parent=gene-CCO57_RS17665;Dbxref=GenBank:WP_000681026.1;Name=WP_000681026.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=CCO57_RS17665;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000681026.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 12308 13174 . + . ID=gene-CCO57_RS17675;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CCO57_RS17675;old_locus_tag=CCO57_17655 NZ_NPMC01000011.1 Protein Homology CDS 12308 13174 . + 0 ID=cds-WP_000729165.1;Parent=gene-CCO57_RS17675;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=CCO57_RS17675;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 13176 13388 . + . ID=gene-CCO57_RS17680;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=CCO57_RS17680;old_locus_tag=CCO57_17660 NZ_NPMC01000011.1 Protein Homology CDS 13176 13388 . + 0 ID=cds-WP_000190278.1;Parent=gene-CCO57_RS17680;Dbxref=GenBank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=CCO57_RS17680;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 13516 14061 . + . ID=gene-CCO57_RS17685;Name=CCO57_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17685;old_locus_tag=CCO57_17665 NZ_NPMC01000011.1 Protein Homology CDS 13516 14061 . + 0 ID=cds-WP_001143568.1;Parent=gene-CCO57_RS17685;Dbxref=GenBank:WP_001143568.1;Name=WP_001143568.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=CCO57_RS17685;product=metal-dependent hydrolase;protein_id=WP_001143568.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 14054 14491 . + . ID=gene-CCO57_RS17690;Name=CCO57_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17690;old_locus_tag=CCO57_17670 NZ_NPMC01000011.1 Protein Homology CDS 14054 14491 . + 0 ID=cds-WP_094915057.1;Parent=gene-CCO57_RS17690;Dbxref=GenBank:WP_094915057.1;Name=WP_094915057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=CCO57_RS17690;product=STM0539 family protein;protein_id=WP_094915057.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 14488 15312 . + . ID=gene-CCO57_RS17695;Name=CCO57_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17695;old_locus_tag=CCO57_17675 NZ_NPMC01000011.1 Protein Homology CDS 14488 15312 . + 0 ID=cds-WP_094915058.1;Parent=gene-CCO57_RS17695;Dbxref=GenBank:WP_094915058.1;Name=WP_094915058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=CCO57_RS17695;product=DUF2145 domain-containing protein;protein_id=WP_094915058.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 15356 16741 . - . ID=gene-CCO57_RS17700;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CCO57_RS17700;old_locus_tag=CCO57_17680 NZ_NPMC01000011.1 Protein Homology CDS 15356 16741 . - 0 ID=cds-WP_001529008.1;Parent=gene-CCO57_RS17700;Dbxref=GenBank:WP_001529008.1;Name=WP_001529008.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=CCO57_RS17700;product=cysteine--tRNA ligase;protein_id=WP_001529008.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 16914 17408 . + . ID=gene-CCO57_RS17705;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=CCO57_RS17705;old_locus_tag=CCO57_17685 NZ_NPMC01000011.1 Protein Homology CDS 16914 17408 . + 0 ID=cds-WP_000255991.1;Parent=gene-CCO57_RS17705;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=CCO57_RS17705;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 17411 18133 . + . ID=gene-CCO57_RS17710;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=CCO57_RS17710;old_locus_tag=CCO57_17690 NZ_NPMC01000011.1 Protein Homology CDS 17411 18133 . + 0 ID=cds-WP_000212281.1;Parent=gene-CCO57_RS17710;Dbxref=GenBank:WP_000212281.1;Name=WP_000212281.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=CCO57_RS17710;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212281.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 18251 18760 . + . ID=gene-CCO57_RS17720;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CCO57_RS17720;old_locus_tag=CCO57_17700 NZ_NPMC01000011.1 Protein Homology CDS 18251 18760 . + 0 ID=cds-WP_000098736.1;Parent=gene-CCO57_RS17720;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=CCO57_RS17720;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 18757 19824 . + . ID=gene-CCO57_RS17725;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CCO57_RS17725;old_locus_tag=CCO57_17705 NZ_NPMC01000011.1 Protein Homology CDS 18757 19824 . + 0 ID=cds-WP_024155330.1;Parent=gene-CCO57_RS17725;Dbxref=GenBank:WP_024155330.1;Name=WP_024155330.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=CCO57_RS17725;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_024155330.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 19920 21005 . + . ID=gene-CCO57_RS17730;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=CCO57_RS17730;old_locus_tag=CCO57_17710 NZ_NPMC01000011.1 Protein Homology CDS 19920 21005 . + 0 ID=cds-WP_000997740.1;Parent=gene-CCO57_RS17730;Dbxref=GenBank:WP_000997740.1;Name=WP_000997740.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997743.1;locus_tag=CCO57_RS17730;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_000997740.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 21044 21703 . - . ID=gene-CCO57_RS17735;Name=CCO57_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17735;old_locus_tag=CCO57_17715 NZ_NPMC01000011.1 Protein Homology CDS 21044 21703 . - 0 ID=cds-WP_000342247.1;Parent=gene-CCO57_RS17735;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=CCO57_RS17735;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 21696 22712 . - . ID=gene-CCO57_RS17740;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=CCO57_RS17740;old_locus_tag=CCO57_17720 NZ_NPMC01000011.1 Protein Homology CDS 21696 22712 . - 0 ID=cds-WP_000569660.1;Parent=gene-CCO57_RS17740;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=CCO57_RS17740;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 22749 23579 . - . ID=gene-CCO57_RS17745;Name=CCO57_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17745;old_locus_tag=CCO57_17725 NZ_NPMC01000011.1 Protein Homology CDS 22749 23579 . - 0 ID=cds-WP_001642920.1;Parent=gene-CCO57_RS17745;Dbxref=GenBank:WP_001642920.1;Name=WP_001642920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=CCO57_RS17745;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_001642920.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 23836 24969 . - . ID=gene-CCO57_RS17750;Name=CCO57_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17750;old_locus_tag=CCO57_17730 NZ_NPMC01000011.1 Protein Homology CDS 23836 24969 . - 0 ID=cds-WP_000152866.1;Parent=gene-CCO57_RS17750;Dbxref=GenBank:WP_000152866.1;Name=WP_000152866.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=CCO57_RS17750;product=porin;protein_id=WP_000152866.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 25155 27569 . - . ID=gene-CCO57_RS17755;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=CCO57_RS17755;old_locus_tag=CCO57_17735 NZ_NPMC01000011.1 Protein Homology CDS 25155 27569 . - 0 ID=cds-WP_094915059.1;Parent=gene-CCO57_RS17755;Dbxref=GenBank:WP_094915059.1;Name=WP_094915059.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=CCO57_RS17755;product=putative ABC transporter permease subunit YbbP;protein_id=WP_094915059.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 27566 28252 . - . ID=gene-CCO57_RS17760;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=CCO57_RS17760;old_locus_tag=CCO57_17740 NZ_NPMC01000011.1 Protein Homology CDS 27566 28252 . - 0 ID=cds-WP_001110598.1;Parent=gene-CCO57_RS17760;Dbxref=GenBank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=CCO57_RS17760;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110598.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 28223 28837 . + . ID=gene-CCO57_RS17765;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=CCO57_RS17765;old_locus_tag=CCO57_17745 NZ_NPMC01000011.1 Protein Homology CDS 28223 28837 . + 0 ID=cds-WP_001010574.1;Parent=gene-CCO57_RS17765;Dbxref=GenBank:WP_001010574.1;Name=WP_001010574.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=CCO57_RS17765;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010574.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 28992 29762 . + . ID=gene-CCO57_RS17770;Name=CCO57_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17770;old_locus_tag=CCO57_17750 NZ_NPMC01000011.1 Protein Homology CDS 28992 29762 . + 0 ID=cds-WP_001172804.1;Parent=gene-CCO57_RS17770;Dbxref=GenBank:WP_001172804.1;Name=WP_001172804.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=CCO57_RS17770;product=SDR family oxidoreductase;protein_id=WP_001172804.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 29822 30676 . + . ID=gene-CCO57_RS17775;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=CCO57_RS17775;old_locus_tag=CCO57_17755 NZ_NPMC01000011.1 Protein Homology CDS 29822 30676 . + 0 ID=cds-WP_094915060.1;Parent=gene-CCO57_RS17775;Dbxref=GenBank:WP_094915060.1;Name=WP_094915060.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=CCO57_RS17775;product=chaperedoxin;protein_id=WP_094915060.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 30762 31541 . - . ID=gene-CCO57_RS17780;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=CCO57_RS17780;old_locus_tag=CCO57_17760 NZ_NPMC01000011.1 Protein Homology CDS 30762 31541 . - 0 ID=cds-WP_001002130.1;Parent=gene-CCO57_RS17780;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=CCO57_RS17780;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 31528 32205 . - . ID=gene-CCO57_RS17785;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=CCO57_RS17785;old_locus_tag=CCO57_17765 NZ_NPMC01000011.1 Protein Homology CDS 31528 32205 . - 0 ID=cds-WP_000140195.1;Parent=gene-CCO57_RS17785;Dbxref=GenBank:WP_000140195.1;Name=WP_000140195.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=CCO57_RS17785;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_000140195.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 32352 33269 . + . ID=gene-CCO57_RS17790;Name=CCO57_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17790;old_locus_tag=CCO57_17770 NZ_NPMC01000011.1 Protein Homology CDS 32352 33269 . + 0 ID=cds-WP_000906146.1;Parent=gene-CCO57_RS17790;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=CCO57_RS17790;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 33266 33718 . + . ID=gene-CCO57_RS17795;Name=CCO57_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17795;old_locus_tag=CCO57_17775 NZ_NPMC01000011.1 Protein Homology CDS 33266 33718 . + 0 ID=cds-WP_000561177.1;Parent=gene-CCO57_RS17795;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=CCO57_RS17795;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 33719 34135 . - . ID=gene-CCO57_RS17800;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=CCO57_RS17800;old_locus_tag=CCO57_17780 NZ_NPMC01000011.1 Protein Homology CDS 33719 34135 . - 0 ID=cds-WP_001026760.1;Parent=gene-CCO57_RS17800;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=CCO57_RS17800;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 34245 36746 . + . ID=gene-CCO57_RS17805;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=CCO57_RS17805;old_locus_tag=CCO57_17785 NZ_NPMC01000011.1 Protein Homology CDS 34245 36746 . + 0 ID=cds-WP_000083913.1;Parent=gene-CCO57_RS17805;Dbxref=GenBank:WP_000083913.1;Name=WP_000083913.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=CCO57_RS17805;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083913.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 36899 37726 . + . ID=gene-CCO57_RS17810;Name=CCO57_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17810;old_locus_tag=CCO57_17790 NZ_NPMC01000011.1 Protein Homology CDS 36899 37726 . + 0 ID=cds-WP_094915061.1;Parent=gene-CCO57_RS17810;Dbxref=GenBank:WP_094915061.1;Name=WP_094915061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=CCO57_RS17810;product=lysozyme inhibitor LprI family protein;protein_id=WP_094915061.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 37810 38604 . + . ID=gene-CCO57_RS17815;Name=CCO57_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17815;old_locus_tag=CCO57_17795 NZ_NPMC01000011.1 Protein Homology CDS 37810 38604 . + 0 ID=cds-WP_023212905.1;Parent=gene-CCO57_RS17815;Dbxref=GenBank:WP_023212905.1;Name=WP_023212905.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=CCO57_RS17815;product=TraB/GumN family protein;protein_id=WP_023212905.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 38806 39285 . + . ID=gene-CCO57_RS17820;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CCO57_RS17820;old_locus_tag=CCO57_17800 NZ_NPMC01000011.1 Protein Homology CDS 38806 39285 . + 0 ID=cds-WP_000186618.1;Parent=gene-CCO57_RS17820;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=CCO57_RS17820;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 39402 41054 . - . ID=gene-CCO57_RS17825;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=CCO57_RS17825;old_locus_tag=CCO57_17805 NZ_NPMC01000011.1 Protein Homology CDS 39402 41054 . - 0 ID=cds-WP_094915062.1;Parent=gene-CCO57_RS17825;Dbxref=GenBank:WP_094915062.1;Name=WP_094915062.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=CCO57_RS17825;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_094915062.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 41227 42447 . + . ID=gene-CCO57_RS17830;Name=CCO57_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17830;old_locus_tag=CCO57_17810 NZ_NPMC01000011.1 Protein Homology CDS 41227 42447 . + 0 ID=cds-WP_001251593.1;Parent=gene-CCO57_RS17830;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=CCO57_RS17830;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 42662 44338 . + . ID=gene-CCO57_RS17835;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=CCO57_RS17835;old_locus_tag=CCO57_17815 NZ_NPMC01000011.1 Protein Homology CDS 42662 44338 . + 0 ID=cds-WP_000546202.1;Parent=gene-CCO57_RS17835;Dbxref=GenBank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=CCO57_RS17835;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546202.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 44387 45691 . - . ID=gene-CCO57_RS17840;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=CCO57_RS17840;old_locus_tag=CCO57_17820 NZ_NPMC01000011.1 Protein Homology CDS 44387 45691 . - 0 ID=cds-WP_000671592.1;Parent=gene-CCO57_RS17840;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=CCO57_RS17840;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 45844 46815 . + . ID=gene-CCO57_RS17845;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=CCO57_RS17845;old_locus_tag=CCO57_17825 NZ_NPMC01000011.1 Protein Homology CDS 45844 46815 . + 0 ID=cds-WP_023207520.1;Parent=gene-CCO57_RS17845;Dbxref=GenBank:WP_023207520.1;Name=WP_023207520.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=CCO57_RS17845;product=acetyl esterase;protein_id=WP_023207520.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 46812 47774 . - . ID=gene-CCO57_RS17850;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CCO57_RS17850;old_locus_tag=CCO57_17830 NZ_NPMC01000011.1 Protein Homology CDS 46812 47774 . - 0 ID=cds-WP_001250078.1;Parent=gene-CCO57_RS17850;Dbxref=GenBank:WP_001250078.1;Name=WP_001250078.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=CCO57_RS17850;product=ferrochelatase;protein_id=WP_001250078.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 48002 48646 . - . ID=gene-CCO57_RS17855;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=CCO57_RS17855;old_locus_tag=CCO57_17835 NZ_NPMC01000011.1 Protein Homology CDS 48002 48646 . - 0 ID=cds-WP_001220237.1;Parent=gene-CCO57_RS17855;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=CCO57_RS17855;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 48888 50762 . - . ID=gene-CCO57_RS17865;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=CCO57_RS17865;old_locus_tag=CCO57_17845 NZ_NPMC01000011.1 Protein Homology CDS 48888 50762 . - 0 ID=cds-WP_001543201.1;Parent=gene-CCO57_RS17865;Dbxref=GenBank:WP_001543201.1;Name=WP_001543201.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=CCO57_RS17865;product=molecular chaperone HtpG;protein_id=WP_001543201.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 50873 51478 . - . ID=gene-CCO57_RS17870;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CCO57_RS17870;old_locus_tag=CCO57_17850 NZ_NPMC01000011.1 Protein Homology CDS 50873 51478 . - 0 ID=cds-WP_001195023.1;Parent=gene-CCO57_RS17870;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=CCO57_RS17870;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 51478 51807 . - . ID=gene-CCO57_RS17875;Name=CCO57_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17875;old_locus_tag=CCO57_17855 NZ_NPMC01000011.1 Protein Homology CDS 51478 51807 . - 0 ID=cds-WP_000467098.1;Parent=gene-CCO57_RS17875;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=CCO57_RS17875;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 51853 53781 . - . ID=gene-CCO57_RS17880;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CCO57_RS17880;old_locus_tag=CCO57_17860 NZ_NPMC01000011.1 Protein Homology CDS 51853 53781 . - 0 ID=cds-WP_000121958.1;Parent=gene-CCO57_RS17880;Dbxref=GenBank:WP_000121958.1;Name=WP_000121958.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=CCO57_RS17880;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121958.1;transl_table=11 NZ_NPMC01000011.1 cmsearch sequence_feature 52456 52520 . - . ID=id-CCO57_RS17880;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS17880 NZ_NPMC01000011.1 RefSeq gene 53895 54446 . - . ID=gene-CCO57_RS17885;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=CCO57_RS17885;old_locus_tag=CCO57_17865 NZ_NPMC01000011.1 Protein Homology CDS 53895 54446 . - 0 ID=cds-WP_080089113.1;Parent=gene-CCO57_RS17885;Dbxref=GenBank:WP_080089113.1;Name=WP_080089113.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=CCO57_RS17885;product=adenine phosphoribosyltransferase;protein_id=WP_080089113.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 54599 54976 . - . ID=gene-CCO57_RS17895;Name=CCO57_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17895;old_locus_tag=CCO57_17875 NZ_NPMC01000011.1 Protein Homology CDS 54599 54976 . - 0 ID=cds-WP_001189860.1;Parent=gene-CCO57_RS17895;Dbxref=GenBank:WP_001189860.1;Name=WP_001189860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=CCO57_RS17895;product=DUF454 family protein;protein_id=WP_001189860.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 55045 55572 . + . ID=gene-CCO57_RS17900;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=CCO57_RS17900;old_locus_tag=CCO57_17880 NZ_NPMC01000011.1 Protein Homology CDS 55045 55572 . + 0 ID=cds-WP_023225731.1;Parent=gene-CCO57_RS17900;Dbxref=GenBank:WP_023225731.1;Name=WP_023225731.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=CCO57_RS17900;product=primosomal replication protein N'';protein_id=WP_023225731.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 55586 55753 . + . ID=gene-CCO57_RS17905;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=CCO57_RS17905;old_locus_tag=CCO57_17885 NZ_NPMC01000011.1 Protein Homology CDS 55586 55753 . + 0 ID=cds-WP_000051161.1;Parent=gene-CCO57_RS17905;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=CCO57_RS17905;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 55823 56746 . + . ID=gene-CCO57_RS17910;Name=CCO57_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17910;old_locus_tag=CCO57_17890 NZ_NPMC01000011.1 Protein Homology CDS 55823 56746 . + 0 ID=cds-WP_023225730.1;Parent=gene-CCO57_RS17910;Dbxref=GenBank:WP_023225730.1;Name=WP_023225730.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=CCO57_RS17910;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_023225730.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 56788 60150 . - . ID=gene-CCO57_RS17915;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=CCO57_RS17915;old_locus_tag=CCO57_17895 NZ_NPMC01000011.1 Protein Homology CDS 56788 60150 . - 0 ID=cds-WP_094915063.1;Parent=gene-CCO57_RS17915;Dbxref=GenBank:WP_094915063.1;Name=WP_094915063.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=CCO57_RS17915;product=mechanosensitive channel MscK;protein_id=WP_094915063.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 60269 60922 . - . ID=gene-CCO57_RS17920;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=CCO57_RS17920;old_locus_tag=CCO57_17900 NZ_NPMC01000011.1 Protein Homology CDS 60269 60922 . - 0 ID=cds-WP_000101756.1;Parent=gene-CCO57_RS17920;Dbxref=GenBank:WP_000101756.1;Name=WP_000101756.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=CCO57_RS17920;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101756.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 61064 62257 . + . ID=gene-CCO57_RS17925;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=CCO57_RS17925;old_locus_tag=CCO57_17905 NZ_NPMC01000011.1 Protein Homology CDS 61064 62257 . + 0 ID=cds-WP_001039202.1;Parent=gene-CCO57_RS17925;Dbxref=GenBank:WP_001039202.1;Name=WP_001039202.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=CCO57_RS17925;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039202.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 62280 65429 . + . ID=gene-CCO57_RS17930;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=CCO57_RS17930;old_locus_tag=CCO57_17910 NZ_NPMC01000011.1 Protein Homology CDS 62280 65429 . + 0 ID=cds-WP_001132508.1;Parent=gene-CCO57_RS17930;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=CCO57_RS17930;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 65925 66299 . + . ID=gene-CCO57_RS17935;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=CCO57_RS17935;old_locus_tag=CCO57_17915 NZ_NPMC01000011.1 Protein Homology CDS 65925 66299 . + 0 ID=cds-WP_000344807.1;Parent=gene-CCO57_RS17935;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=CCO57_RS17935;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 66327 66545 . + . ID=gene-CCO57_RS17940;Name=CCO57_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17940;old_locus_tag=CCO57_17920 NZ_NPMC01000011.1 Protein Homology CDS 66327 66545 . + 0 ID=cds-WP_001280991.1;Parent=gene-CCO57_RS17940;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=CCO57_RS17940;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 66724 67275 . + . ID=gene-CCO57_RS17945;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=CCO57_RS17945;old_locus_tag=CCO57_17925 NZ_NPMC01000011.1 Protein Homology CDS 66724 67275 . + 0 ID=cds-WP_001278786.1;Parent=gene-CCO57_RS17945;Dbxref=GenBank:WP_001278786.1;Name=WP_001278786.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=CCO57_RS17945;product=maltose O-acetyltransferase;protein_id=WP_001278786.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 67393 67863 . + . ID=gene-CCO57_RS17950;Name=CCO57_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17950;old_locus_tag=CCO57_17930 NZ_NPMC01000011.1 Protein Homology CDS 67393 67863 . + 0 ID=cds-WP_000136183.1;Parent=gene-CCO57_RS17950;Dbxref=GenBank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=CCO57_RS17950;product=YlaC family protein;protein_id=WP_000136183.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 67919 68059 . - . ID=gene-CCO57_RS17955;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=CCO57_RS17955;old_locus_tag=CCO57_17935 NZ_NPMC01000011.1 Protein Homology CDS 67919 68059 . - 0 ID=cds-WP_001197749.1;Parent=gene-CCO57_RS17955;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=CCO57_RS17955;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 68065 68325 . - . ID=gene-CCO57_RS17960;Name=CCO57_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17960;old_locus_tag=CCO57_17940 NZ_NPMC01000011.1 Protein Homology CDS 68065 68325 . - 0 ID=cds-WP_000801415.1;Parent=gene-CCO57_RS17960;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=CCO57_RS17960;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 68550 70100 . + . ID=gene-CCO57_RS17965;Name=CCO57_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17965;old_locus_tag=CCO57_17945 NZ_NPMC01000011.1 Protein Homology CDS 68550 70100 . + 0 ID=cds-WP_000213140.1;Parent=gene-CCO57_RS17965;Dbxref=GenBank:WP_000213140.1;Name=WP_000213140.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=CCO57_RS17965;product=EAL domain-containing protein;protein_id=WP_000213140.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 70150 70246 . - . ID=gene-CCO57_RS17970;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CCO57_RS17970;old_locus_tag=CCO57_17950 NZ_NPMC01000011.1 cmsearch SRP_RNA 70150 70246 . - . ID=rna-CCO57_RS17970;Parent=gene-CCO57_RS17970;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS17970;product=signal recognition particle sRNA small type NZ_NPMC01000011.1 cmsearch exon 70150 70246 . - . ID=exon-CCO57_RS17970-1;Parent=rna-CCO57_RS17970;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS17970;product=signal recognition particle sRNA small type NZ_NPMC01000011.1 RefSeq gene 70331 70720 . + . ID=gene-CCO57_RS17975;Name=CCO57_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17975;old_locus_tag=CCO57_17955 NZ_NPMC01000011.1 Protein Homology CDS 70331 70720 . + 0 ID=cds-WP_000961285.1;Parent=gene-CCO57_RS17975;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=CCO57_RS17975;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 70753 71322 . - . ID=gene-CCO57_RS17980;Name=CCO57_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS17980;old_locus_tag=CCO57_17960 NZ_NPMC01000011.1 Protein Homology CDS 70753 71322 . - 0 ID=cds-WP_000779801.1;Parent=gene-CCO57_RS17980;Dbxref=GenBank:WP_000779801.1;Name=WP_000779801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=CCO57_RS17980;product=YbaY family lipoprotein;protein_id=WP_000779801.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 71537 72397 . + . ID=gene-CCO57_RS17985;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=CCO57_RS17985;old_locus_tag=CCO57_17965 NZ_NPMC01000011.1 Protein Homology CDS 71537 72397 . + 0 ID=cds-WP_000084176.1;Parent=gene-CCO57_RS17985;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=CCO57_RS17985;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 72497 73783 . - . ID=gene-CCO57_RS17990;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=CCO57_RS17990;old_locus_tag=CCO57_17970 NZ_NPMC01000011.1 Protein Homology CDS 72497 73783 . - 0 ID=cds-WP_000684912.1;Parent=gene-CCO57_RS17990;Dbxref=GenBank:WP_000684912.1;Name=WP_000684912.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=CCO57_RS17990;product=ammonium transporter AmtB;protein_id=WP_000684912.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 73815 74153 . - . ID=gene-CCO57_RS17995;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=CCO57_RS17995;old_locus_tag=CCO57_17975 NZ_NPMC01000011.1 Protein Homology CDS 73815 74153 . - 0 ID=cds-WP_000780341.1;Parent=gene-CCO57_RS17995;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=CCO57_RS17995;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 74366 76147 . - . ID=gene-CCO57_RS18000;Name=CCO57_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18000;old_locus_tag=CCO57_17980 NZ_NPMC01000011.1 Protein Homology CDS 74366 76147 . - 0 ID=cds-WP_001256070.1;Parent=gene-CCO57_RS18000;Dbxref=GenBank:WP_001256070.1;Name=WP_001256070.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=CCO57_RS18000;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256070.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 76140 77912 . - . ID=gene-CCO57_RS18005;Name=CCO57_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18005;old_locus_tag=CCO57_17985 NZ_NPMC01000011.1 Protein Homology CDS 76140 77912 . - 0 ID=cds-WP_001235560.1;Parent=gene-CCO57_RS18005;Dbxref=GenBank:WP_001235560.1;Name=WP_001235560.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=CCO57_RS18005;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235560.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 77953 78411 . - . ID=gene-CCO57_RS18010;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=CCO57_RS18010;old_locus_tag=CCO57_17990 NZ_NPMC01000011.1 Protein Homology CDS 77953 78411 . - 0 ID=cds-WP_000884593.1;Parent=gene-CCO57_RS18010;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=CCO57_RS18010;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 78524 79579 . + . ID=gene-CCO57_RS18015;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=CCO57_RS18015;old_locus_tag=CCO57_17995 NZ_NPMC01000011.1 Protein Homology CDS 78524 79579 . + 0 ID=cds-WP_000987849.1;Parent=gene-CCO57_RS18015;Dbxref=GenBank:WP_000987849.1;Name=WP_000987849.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=CCO57_RS18015;product=cysteine desulfhydrase;protein_id=WP_000987849.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 79629 80447 . - . ID=gene-CCO57_RS18020;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=CCO57_RS18020;old_locus_tag=CCO57_18000 NZ_NPMC01000011.1 Protein Homology CDS 79629 80447 . - 0 ID=cds-WP_086776607.1;Parent=gene-CCO57_RS18020;Dbxref=GenBank:WP_086776607.1;Name=WP_086776607.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=CCO57_RS18020;product=HMP-PP phosphatase;protein_id=WP_086776607.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 80548 82248 . + . ID=gene-CCO57_RS18025;Name=CCO57_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18025;old_locus_tag=CCO57_18005 NZ_NPMC01000011.1 Protein Homology CDS 80548 82248 . + 0 ID=cds-WP_001238181.1;Parent=gene-CCO57_RS18025;Dbxref=GenBank:WP_001238181.1;Name=WP_001238181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=CCO57_RS18025;product=SgrR family transcriptional regulator;protein_id=WP_001238181.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 82313 83008 . + . ID=gene-CCO57_RS18030;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CCO57_RS18030;old_locus_tag=CCO57_18010 NZ_NPMC01000011.1 Protein Homology CDS 82313 83008 . + 0 ID=cds-WP_000817201.1;Parent=gene-CCO57_RS18030;Dbxref=GenBank:WP_000817201.1;Name=WP_000817201.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=CCO57_RS18030;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817201.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 83116 83514 . - . ID=gene-CCO57_RS18035;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=CCO57_RS18035;old_locus_tag=CCO57_18015 NZ_NPMC01000011.1 Protein Homology CDS 83116 83514 . - 0 ID=cds-WP_001194543.1;Parent=gene-CCO57_RS18035;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=CCO57_RS18035;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 83618 83992 . - . ID=gene-CCO57_RS18040;Name=CCO57_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18040;old_locus_tag=CCO57_18020 NZ_NPMC01000011.1 Protein Homology CDS 83618 83992 . - 0 ID=cds-WP_000680324.1;Parent=gene-CCO57_RS18040;Dbxref=GenBank:WP_000680324.1;Name=WP_000680324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=CCO57_RS18040;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680324.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 84142 86013 . - . ID=gene-CCO57_RS18045;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=CCO57_RS18045;old_locus_tag=CCO57_18025 NZ_NPMC01000011.1 Protein Homology CDS 84142 86013 . - 0 ID=cds-WP_000969425.1;Parent=gene-CCO57_RS18045;Dbxref=GenBank:WP_000969425.1;Name=WP_000969425.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=CCO57_RS18045;product=peptidylprolyl isomerase;protein_id=WP_000969425.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 86304 86594 . - . ID=gene-CCO57_RS18050;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=CCO57_RS18050;old_locus_tag=CCO57_18030 NZ_NPMC01000011.1 Protein Homology CDS 86304 86594 . - 0 ID=cds-WP_254888479.1;Parent=gene-CCO57_RS18050;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=CCO57_RS18050;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 86785 89139 . - . ID=gene-CCO57_RS18055;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CCO57_RS18055;old_locus_tag=CCO57_18035 NZ_NPMC01000011.1 Protein Homology CDS 86785 89139 . - 0 ID=cds-WP_023214246.1;Parent=gene-CCO57_RS18055;Dbxref=GenBank:WP_023214246.1;Name=WP_023214246.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=CCO57_RS18055;product=endopeptidase La;protein_id=WP_023214246.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 89325 90596 . - . ID=gene-CCO57_RS18060;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CCO57_RS18060;old_locus_tag=CCO57_18040 NZ_NPMC01000011.1 Protein Homology CDS 89325 90596 . - 0 ID=cds-WP_000130314.1;Parent=gene-CCO57_RS18060;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=CCO57_RS18060;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 90847 91470 . - . ID=gene-CCO57_RS18065;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CCO57_RS18065;old_locus_tag=CCO57_18045 NZ_NPMC01000011.1 Protein Homology CDS 90847 91470 . - 0 ID=cds-WP_000122257.1;Parent=gene-CCO57_RS18065;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=CCO57_RS18065;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 91717 93015 . - . ID=gene-CCO57_RS18070;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CCO57_RS18070;old_locus_tag=CCO57_18050 NZ_NPMC01000011.1 Protein Homology CDS 91717 93015 . - 0 ID=cds-WP_001198403.1;Parent=gene-CCO57_RS18070;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=CCO57_RS18070;product=trigger factor;protein_id=WP_001198403.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 93362 93679 . - . ID=gene-CCO57_RS18080;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=CCO57_RS18080;old_locus_tag=CCO57_18060 NZ_NPMC01000011.1 Protein Homology CDS 93362 93679 . - 0 ID=cds-WP_000973433.1;Parent=gene-CCO57_RS18080;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=CCO57_RS18080;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 93983 94561 . + . ID=gene-CCO57_RS18090;Name=CCO57_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18090;old_locus_tag=CCO57_18070 NZ_NPMC01000011.1 Protein Homology CDS 93983 94561 . + 0 ID=cds-WP_001539323.1;Parent=gene-CCO57_RS18090;Dbxref=GenBank:WP_001539323.1;Name=WP_001539323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=CCO57_RS18090;product=lipoprotein;protein_id=WP_001539323.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 94605 96080 . + . ID=gene-CCO57_RS18095;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=CCO57_RS18095;old_locus_tag=CCO57_18075 NZ_NPMC01000011.1 Protein Homology CDS 94605 96080 . + 0 ID=cds-WP_000098482.1;Parent=gene-CCO57_RS18095;Dbxref=GenBank:WP_000098482.1;Name=WP_000098482.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=CCO57_RS18095;product=muropeptide MFS transporter AmpG;protein_id=WP_000098482.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 96533 97489 . + . ID=gene-CCO57_RS18100;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=CCO57_RS18100;old_locus_tag=CCO57_18080 NZ_NPMC01000011.1 Protein Homology CDS 96533 97489 . + 0 ID=cds-WP_094915064.1;Parent=gene-CCO57_RS18100;Dbxref=GenBank:WP_094915064.1;Name=WP_094915064.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=CCO57_RS18100;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_094915064.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 97500 99491 . + . ID=gene-CCO57_RS18105;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=CCO57_RS18105;old_locus_tag=CCO57_18085 NZ_NPMC01000011.1 Protein Homology CDS 97500 99491 . + 0 ID=cds-WP_000467158.1;Parent=gene-CCO57_RS18105;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=CCO57_RS18105;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 99481 100095 . + . ID=gene-CCO57_RS18110;Name=CCO57_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18110;old_locus_tag=CCO57_18090 NZ_NPMC01000011.1 Protein Homology CDS 99481 100095 . + 0 ID=cds-WP_000179833.1;Parent=gene-CCO57_RS18110;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=CCO57_RS18110;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 100095 100424 . + . ID=gene-CCO57_RS18115;Name=CCO57_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18115;old_locus_tag=CCO57_18095 NZ_NPMC01000011.1 Protein Homology CDS 100095 100424 . + 0 ID=cds-WP_000019878.1;Parent=gene-CCO57_RS18115;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=CCO57_RS18115;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 100436 101326 . + . ID=gene-CCO57_RS18120;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CCO57_RS18120;old_locus_tag=CCO57_18100 NZ_NPMC01000011.1 Protein Homology CDS 100436 101326 . + 0 ID=cds-WP_000971352.1;Parent=gene-CCO57_RS18120;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=CCO57_RS18120;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 101547 102911 . + . ID=gene-CCO57_RS18125;Name=CCO57_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18125;old_locus_tag=CCO57_18105 NZ_NPMC01000011.1 Protein Homology CDS 101547 102911 . + 0 ID=cds-WP_001000935.1;Parent=gene-CCO57_RS18125;Dbxref=GenBank:WP_001000935.1;Name=WP_001000935.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=CCO57_RS18125;product=MFS transporter;protein_id=WP_001000935.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 102958 103449 . - . ID=gene-CCO57_RS18130;Name=CCO57_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18130;old_locus_tag=CCO57_18110 NZ_NPMC01000011.1 Protein Homology CDS 102958 103449 . - 0 ID=cds-WP_001138913.1;Parent=gene-CCO57_RS18130;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO57_RS18130;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 103575 104486 . + . ID=gene-CCO57_RS18135;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=CCO57_RS18135;old_locus_tag=CCO57_18115 NZ_NPMC01000011.1 Protein Homology CDS 103575 104486 . + 0 ID=cds-WP_094915065.1;Parent=gene-CCO57_RS18135;Dbxref=GenBank:WP_094915065.1;Name=WP_094915065.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=CCO57_RS18135;product=2-dehydropantoate 2-reductase;protein_id=WP_094915065.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 104449 105039 . + . ID=gene-CCO57_RS18140;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=CCO57_RS18140;old_locus_tag=CCO57_18120 NZ_NPMC01000011.1 Protein Homology CDS 104449 105039 . + 0 ID=cds-WP_001275803.1;Parent=gene-CCO57_RS18140;Dbxref=GenBank:WP_001275803.1;Name=WP_001275803.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=CCO57_RS18140;product=protein deglycase YajL;protein_id=WP_001275803.1;transl_table=11 NZ_NPMC01000011.1 RefSeq pseudogene 105048 105130 . - . ID=gene-CCO57_RS25015;Name=CCO57_RS25015;end_range=105130,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25015;partial=true;pseudo=true;start_range=.,105048 NZ_NPMC01000011.1 Protein Homology CDS 105048 105130 . - 0 ID=cds-CCO57_RS25015;Parent=gene-CCO57_RS25015;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=105130,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO57_RS25015;partial=true;product=hypothetical protein;pseudo=true;start_range=.,105048;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 105136 105945 . - . ID=gene-CCO57_RS18145;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=CCO57_RS18145;old_locus_tag=CCO57_18125 NZ_NPMC01000011.1 Protein Homology CDS 105136 105945 . - 0 ID=cds-WP_094915066.1;Parent=gene-CCO57_RS18145;Dbxref=GenBank:WP_094915066.1;Name=WP_094915066.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=CCO57_RS18145;product=phosphonoacetaldehyde hydrolase;protein_id=WP_094915066.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 105955 107058 . - . ID=gene-CCO57_RS18150;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=CCO57_RS18150;old_locus_tag=CCO57_18130 NZ_NPMC01000011.1 Protein Homology CDS 105955 107058 . - 0 ID=cds-WP_094915067.1;Parent=gene-CCO57_RS18150;Dbxref=GenBank:WP_094915067.1;Name=WP_094915067.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=CCO57_RS18150;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_094915067.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 107198 107917 . + . ID=gene-CCO57_RS18155;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=CCO57_RS18155;old_locus_tag=CCO57_18135 NZ_NPMC01000011.1 Protein Homology CDS 107198 107917 . + 0 ID=cds-WP_000836268.1;Parent=gene-CCO57_RS18155;Dbxref=GenBank:WP_000836268.1;Name=WP_000836268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=CCO57_RS18155;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836268.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 108115 109128 . + . ID=gene-CCO57_RS18160;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=CCO57_RS18160;old_locus_tag=CCO57_18140 NZ_NPMC01000011.1 Protein Homology CDS 108115 109128 . + 0 ID=cds-WP_000778008.1;Parent=gene-CCO57_RS18160;Dbxref=GenBank:WP_000778008.1;Name=WP_000778008.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=CCO57_RS18160;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_000778008.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 109134 110243 . + . ID=gene-CCO57_RS18165;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=CCO57_RS18165;old_locus_tag=CCO57_18145 NZ_NPMC01000011.1 Protein Homology CDS 109134 110243 . + 0 ID=cds-WP_000928787.1;Parent=gene-CCO57_RS18165;Dbxref=GenBank:WP_000928787.1;Name=WP_000928787.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=CCO57_RS18165;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_000928787.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 110246 111106 . + . ID=gene-CCO57_RS18170;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=CCO57_RS18170;old_locus_tag=CCO57_18150 NZ_NPMC01000011.1 Protein Homology CDS 110246 111106 . + 0 ID=cds-WP_000052716.1;Parent=gene-CCO57_RS18170;Dbxref=GenBank:WP_000052716.1;Name=WP_000052716.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=CCO57_RS18170;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_000052716.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 111109 111906 . + . ID=gene-CCO57_RS18175;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=CCO57_RS18175;old_locus_tag=CCO57_18155 NZ_NPMC01000011.1 Protein Homology CDS 111109 111906 . + 0 ID=cds-WP_023225853.1;Parent=gene-CCO57_RS18175;Dbxref=GenBank:WP_023225853.1;Name=WP_023225853.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=CCO57_RS18175;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_023225853.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 111950 113398 . - . ID=gene-CCO57_RS18180;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CCO57_RS18180;old_locus_tag=CCO57_18160 NZ_NPMC01000011.1 Protein Homology CDS 111950 113398 . - 0 ID=cds-WP_000668648.1;Parent=gene-CCO57_RS18180;Dbxref=GenBank:WP_000668648.1;Name=WP_000668648.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=CCO57_RS18180;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668648.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 113608 113850 . + . ID=gene-CCO57_RS18185;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CCO57_RS18185;old_locus_tag=CCO57_18165 NZ_NPMC01000011.1 Protein Homology CDS 113608 113850 . + 0 ID=cds-WP_001124944.1;Parent=gene-CCO57_RS18185;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=CCO57_RS18185;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 113851 114750 . + . ID=gene-CCO57_RS18190;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=CCO57_RS18190;old_locus_tag=CCO57_18170 NZ_NPMC01000011.1 Protein Homology CDS 113851 114750 . + 0 ID=cds-WP_000348074.1;Parent=gene-CCO57_RS18190;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=CCO57_RS18190;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 114774 116636 . + . ID=gene-CCO57_RS18195;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CCO57_RS18195;old_locus_tag=CCO57_18175 NZ_NPMC01000011.1 Protein Homology CDS 114774 116636 . + 0 ID=cds-WP_000006768.1;Parent=gene-CCO57_RS18195;Dbxref=GenBank:WP_000006768.1;Name=WP_000006768.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=CCO57_RS18195;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006768.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 116693 117667 . + . ID=gene-CCO57_RS18200;Name=CCO57_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18200;old_locus_tag=CCO57_18180 NZ_NPMC01000011.1 Protein Homology CDS 116693 117667 . + 0 ID=cds-WP_058111993.1;Parent=gene-CCO57_RS18200;Dbxref=GenBank:WP_058111993.1;Name=WP_058111993.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=CCO57_RS18200;product=aldo/keto reductase;protein_id=WP_058111993.1;transl_table=11 NZ_NPMC01000011.1 RefSeq pseudogene 117675 117763 . + . ID=gene-CCO57_RS25020;Name=CCO57_RS25020;end_range=117763,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25020;partial=true;pseudo=true;start_range=.,117675 NZ_NPMC01000011.1 Protein Homology CDS 117675 117763 . + 0 ID=cds-CCO57_RS25020;Parent=gene-CCO57_RS25020;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=117763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO57_RS25020;partial=true;product=hypothetical protein;pseudo=true;start_range=.,117675;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 117771 118286 . - . ID=gene-CCO57_RS18205;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=CCO57_RS18205;old_locus_tag=CCO57_18185 NZ_NPMC01000011.1 Protein Homology CDS 117771 118286 . - 0 ID=cds-WP_000154063.1;Parent=gene-CCO57_RS18205;Dbxref=GenBank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=CCO57_RS18205;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 118264 119241 . - . ID=gene-CCO57_RS18210;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CCO57_RS18210;old_locus_tag=CCO57_18190 NZ_NPMC01000011.1 Protein Homology CDS 118264 119241 . - 0 ID=cds-WP_000752146.1;Parent=gene-CCO57_RS18210;Dbxref=GenBank:WP_000752146.1;Name=WP_000752146.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459414.1;locus_tag=CCO57_RS18210;product=thiamine-phosphate kinase;protein_id=WP_000752146.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 119320 119739 . - . ID=gene-CCO57_RS18215;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CCO57_RS18215;old_locus_tag=CCO57_18195 NZ_NPMC01000011.1 Protein Homology CDS 119320 119739 . - 0 ID=cds-WP_000801129.1;Parent=gene-CCO57_RS18215;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=CCO57_RS18215;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 119760 120230 . - . ID=gene-CCO57_RS18220;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=CCO57_RS18220;old_locus_tag=CCO57_18200 NZ_NPMC01000011.1 Protein Homology CDS 119760 120230 . - 0 ID=cds-WP_001021370.1;Parent=gene-CCO57_RS18220;Dbxref=GenBank:WP_001021370.1;Name=WP_001021370.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=CCO57_RS18220;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021370.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 120319 121428 . - . ID=gene-CCO57_RS18225;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CCO57_RS18225;old_locus_tag=CCO57_18205 NZ_NPMC01000011.1 Protein Homology CDS 120319 121428 . - 0 ID=cds-WP_094915068.1;Parent=gene-CCO57_RS18225;Dbxref=GenBank:WP_094915068.1;Name=WP_094915068.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=CCO57_RS18225;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_094915068.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 121432 121881 . - . ID=gene-CCO57_RS18230;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CCO57_RS18230;old_locus_tag=CCO57_18210 NZ_NPMC01000011.1 Protein Homology CDS 121432 121881 . - 0 ID=cds-WP_000543533.1;Parent=gene-CCO57_RS18230;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=CCO57_RS18230;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 122033 122572 . + . ID=gene-CCO57_RS18235;Name=CCO57_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18235;old_locus_tag=CCO57_18215 NZ_NPMC01000011.1 Protein Homology CDS 122033 122572 . + 0 ID=cds-WP_000198486.1;Parent=gene-CCO57_RS18235;Dbxref=GenBank:WP_000198486.1;Name=WP_000198486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=CCO57_RS18235;product=DUF3251 domain-containing protein;protein_id=WP_000198486.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 122872 123735 . + . ID=gene-CCO57_RS18240;Name=CCO57_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18240;old_locus_tag=CCO57_18220 NZ_NPMC01000011.1 Protein Homology CDS 122872 123735 . + 0 ID=cds-WP_000752021.1;Parent=gene-CCO57_RS18240;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=CCO57_RS18240;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 123819 123926 . - . ID=gene-CCO57_RS24845;Name=CCO57_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24845 NZ_NPMC01000011.1 Protein Homology CDS 123819 123926 . - 0 ID=cds-WP_000176312.1;Parent=gene-CCO57_RS24845;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=CCO57_RS24845;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 NZ_NPMC01000011.1 RefSeq gene 124365 124712 . - . ID=gene-CCO57_RS18255;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=CCO57_RS18255;old_locus_tag=CCO57_18235 NZ_NPMC01000011.1 Protein Homology CDS 124365 124712 . - 0 ID=cds-WP_000974818.1;Parent=gene-CCO57_RS18255;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=CCO57_RS18255;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 ##sequence-region NZ_NPMC01000012.1 1 119518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000012.1 RefSeq region 1 119518 . + . ID=NZ_NPMC01000012.1:1..119518;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000012.1 RefSeq gene 486 728 . + . ID=gene-CCO57_RS18260;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=CCO57_RS18260;old_locus_tag=CCO57_18240 NZ_NPMC01000012.1 Protein Homology CDS 486 728 . + 0 ID=cds-WP_001541297.1;Parent=gene-CCO57_RS18260;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=CCO57_RS18260;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 792 1430 . + . ID=gene-CCO57_RS18265;Name=CCO57_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18265;old_locus_tag=CCO57_18245 NZ_NPMC01000012.1 Protein Homology CDS 792 1430 . + 0 ID=cds-WP_039514783.1;Parent=gene-CCO57_RS18265;Dbxref=GenBank:WP_039514783.1;Name=WP_039514783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=CCO57_RS18265;product=YjbF family lipoprotein;protein_id=WP_039514783.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 1427 2164 . + . ID=gene-CCO57_RS18270;Name=CCO57_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18270;old_locus_tag=CCO57_18250 NZ_NPMC01000012.1 Protein Homology CDS 1427 2164 . + 0 ID=cds-WP_079982331.1;Parent=gene-CCO57_RS18270;Dbxref=GenBank:WP_079982331.1;Name=WP_079982331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=CCO57_RS18270;product=capsule biosynthesis GfcC family protein;protein_id=WP_079982331.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 2164 4260 . + . ID=gene-CCO57_RS18275;Name=CCO57_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18275;old_locus_tag=CCO57_18255 NZ_NPMC01000012.1 Protein Homology CDS 2164 4260 . + 0 ID=cds-WP_000750787.1;Parent=gene-CCO57_RS18275;Dbxref=GenBank:WP_000750787.1;Name=WP_000750787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=CCO57_RS18275;product=YjbH domain-containing protein;protein_id=WP_000750787.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 4403 4813 . + . ID=gene-CCO57_RS18280;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=CCO57_RS18280;old_locus_tag=CCO57_18260 NZ_NPMC01000012.1 Protein Homology CDS 4403 4813 . + 0 ID=cds-WP_000982752.1;Parent=gene-CCO57_RS18280;Dbxref=GenBank:WP_000982752.1;Name=WP_000982752.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=CCO57_RS18280;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982752.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 4859 6334 . - . ID=gene-CCO57_RS18285;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=CCO57_RS18285;old_locus_tag=CCO57_18265 NZ_NPMC01000012.1 Protein Homology CDS 4859 6334 . - 0 ID=cds-WP_001091898.1;Parent=gene-CCO57_RS18285;Dbxref=GenBank:WP_001091898.1;Name=WP_001091898.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031675.1;locus_tag=CCO57_RS18285;product=D-xylose transporter XylE;protein_id=WP_001091898.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 6654 7544 . - . ID=gene-CCO57_RS18290;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=CCO57_RS18290;old_locus_tag=CCO57_18270 NZ_NPMC01000012.1 Protein Homology CDS 6654 7544 . - 0 ID=cds-WP_001252081.1;Parent=gene-CCO57_RS18290;Dbxref=GenBank:WP_001252081.1;Name=WP_001252081.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=CCO57_RS18290;product=maltose ABC transporter permease MalG;protein_id=WP_001252081.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 7559 9103 . - . ID=gene-CCO57_RS18295;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=CCO57_RS18295;old_locus_tag=CCO57_18275 NZ_NPMC01000012.1 Protein Homology CDS 7559 9103 . - 0 ID=cds-WP_000382569.1;Parent=gene-CCO57_RS18295;Dbxref=GenBank:WP_000382569.1;Name=WP_000382569.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=CCO57_RS18295;product=maltose ABC transporter permease MalF;protein_id=WP_000382569.1;transl_table=11 NZ_NPMC01000012.1 RefSeq pseudogene 9146 9286 . + . ID=gene-CCO57_RS25025;Name=CCO57_RS25025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25025;partial=true;pseudo=true;start_range=.,9146 NZ_NPMC01000012.1 Protein Homology CDS 9146 9286 . + 0 ID=cds-CCO57_RS25025;Parent=gene-CCO57_RS25025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO57_RS25025;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9146;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 9235 10425 . - . ID=gene-CCO57_RS18300;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=CCO57_RS18300;old_locus_tag=CCO57_18280 NZ_NPMC01000012.1 Protein Homology CDS 9235 10425 . - 0 ID=cds-WP_000695415.1;Parent=gene-CCO57_RS18300;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=CCO57_RS18300;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 10787 11896 . + . ID=gene-CCO57_RS18305;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=CCO57_RS18305;old_locus_tag=CCO57_18285 NZ_NPMC01000012.1 Protein Homology CDS 10787 11896 . + 0 ID=cds-WP_000179176.1;Parent=gene-CCO57_RS18305;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=CCO57_RS18305;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 11985 13343 . + . ID=gene-CCO57_RS18310;Name=CCO57_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18310;old_locus_tag=CCO57_18290 NZ_NPMC01000012.1 Protein Homology CDS 11985 13343 . + 0 ID=cds-WP_000973678.1;Parent=gene-CCO57_RS18310;Dbxref=GenBank:WP_000973678.1;Name=WP_000973678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=CCO57_RS18310;product=maltoporin;protein_id=WP_000973678.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 13507 14424 . + . ID=gene-CCO57_RS18315;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=CCO57_RS18315;old_locus_tag=CCO57_18295 NZ_NPMC01000012.1 Protein Homology CDS 13507 14424 . + 0 ID=cds-WP_000782497.1;Parent=gene-CCO57_RS18315;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=CCO57_RS18315;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 14605 15102 . + . ID=gene-CCO57_RS18320;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=CCO57_RS18320;old_locus_tag=CCO57_18300 NZ_NPMC01000012.1 Protein Homology CDS 14605 15102 . + 0 ID=cds-WP_058215294.1;Parent=gene-CCO57_RS18320;Dbxref=GenBank:WP_058215294.1;Name=WP_058215294.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=CCO57_RS18320;product=chorismate lyase;protein_id=WP_058215294.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 15116 15988 . + . ID=gene-CCO57_RS18325;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=CCO57_RS18325;old_locus_tag=CCO57_18305 NZ_NPMC01000012.1 Protein Homology CDS 15116 15988 . + 0 ID=cds-WP_000455249.1;Parent=gene-CCO57_RS18325;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=CCO57_RS18325;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 16087 18507 . - . ID=gene-CCO57_RS18330;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=CCO57_RS18330;old_locus_tag=CCO57_18310 NZ_NPMC01000012.1 Protein Homology CDS 16087 18507 . - 0 ID=cds-WP_000017358.1;Parent=gene-CCO57_RS18330;Dbxref=GenBank:WP_000017358.1;Name=WP_000017358.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=CCO57_RS18330;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017358.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 18678 19046 . + . ID=gene-CCO57_RS18335;Name=CCO57_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18335;old_locus_tag=CCO57_18315 NZ_NPMC01000012.1 Protein Homology CDS 18678 19046 . + 0 ID=cds-WP_000002900.1;Parent=gene-CCO57_RS18335;Dbxref=GenBank:WP_000002900.1;Name=WP_000002900.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=CCO57_RS18335;product=diacylglycerol kinase;protein_id=WP_000002900.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 19155 19763 . + . ID=gene-CCO57_RS18340;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CCO57_RS18340;old_locus_tag=CCO57_18320 NZ_NPMC01000012.1 Protein Homology CDS 19155 19763 . + 0 ID=cds-WP_000646079.1;Parent=gene-CCO57_RS18340;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=CCO57_RS18340;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 19942 21267 . + . ID=gene-CCO57_RS18345;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=CCO57_RS18345;old_locus_tag=CCO57_18325 NZ_NPMC01000012.1 Protein Homology CDS 19942 21267 . + 0 ID=cds-WP_001128116.1;Parent=gene-CCO57_RS18345;Dbxref=GenBank:WP_001128116.1;Name=WP_001128116.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=CCO57_RS18345;product=MATE family efflux transporter DinF;protein_id=WP_001128116.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 21264 21377 . + . ID=gene-CCO57_RS18350;Name=CCO57_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18350;old_locus_tag=CCO57_18330 NZ_NPMC01000012.1 Protein Homology CDS 21264 21377 . + 0 ID=cds-WP_010989093.1;Parent=gene-CCO57_RS18350;Dbxref=GenBank:WP_010989093.1;Name=WP_010989093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=CCO57_RS18350;product=hypothetical protein;protein_id=WP_010989093.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 21399 21608 . + . ID=gene-CCO57_RS18355;Name=CCO57_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18355;old_locus_tag=CCO57_18335 NZ_NPMC01000012.1 Protein Homology CDS 21399 21608 . + 0 ID=cds-WP_001030592.1;Parent=gene-CCO57_RS18355;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=CCO57_RS18355;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 21708 22223 . - . ID=gene-CCO57_RS18360;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=CCO57_RS18360;old_locus_tag=CCO57_18340 NZ_NPMC01000012.1 Protein Homology CDS 21708 22223 . - 0 ID=cds-WP_000416271.1;Parent=gene-CCO57_RS18360;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=CCO57_RS18360;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 22470 23780 . + . ID=gene-CCO57_RS18365;Name=CCO57_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18365;old_locus_tag=CCO57_18345 NZ_NPMC01000012.1 Protein Homology CDS 22470 23780 . + 0 ID=cds-WP_001039341.1;Parent=gene-CCO57_RS18365;Dbxref=GenBank:WP_001039341.1;Name=WP_001039341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=CCO57_RS18365;product=conjugal transfer protein TraF;protein_id=WP_001039341.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 23868 24866 . + . ID=gene-CCO57_RS18370;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=CCO57_RS18370;old_locus_tag=CCO57_18350 NZ_NPMC01000012.1 Protein Homology CDS 23868 24866 . + 0 ID=cds-WP_001527561.1;Parent=gene-CCO57_RS18370;Dbxref=GenBank:WP_001527561.1;Name=WP_001527561.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=CCO57_RS18370;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001527561.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 25034 25276 . + . ID=gene-CCO57_RS18375;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=CCO57_RS18375;old_locus_tag=CCO57_18355 NZ_NPMC01000012.1 Protein Homology CDS 25034 25276 . + 0 ID=cds-WP_000891414.1;Parent=gene-CCO57_RS18375;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=CCO57_RS18375;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 25451 26434 . - . ID=gene-CCO57_RS18380;Name=CCO57_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18380;old_locus_tag=CCO57_18360 NZ_NPMC01000012.1 Protein Homology CDS 25451 26434 . - 0 ID=cds-WP_000235555.1;Parent=gene-CCO57_RS18380;Dbxref=GenBank:WP_000235555.1;Name=WP_000235555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=CCO57_RS18380;product=quinone oxidoreductase;protein_id=WP_000235555.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 26499 27914 . + . ID=gene-CCO57_RS18385;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CCO57_RS18385;old_locus_tag=CCO57_18365 NZ_NPMC01000012.1 Protein Homology CDS 26499 27914 . + 0 ID=cds-WP_000918353.1;Parent=gene-CCO57_RS18385;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=CCO57_RS18385;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 27946 29025 . + . ID=gene-CCO57_RS18390;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CCO57_RS18390;old_locus_tag=CCO57_18370 NZ_NPMC01000012.1 Protein Homology CDS 27946 29025 . + 0 ID=cds-WP_001147297.1;Parent=gene-CCO57_RS18390;Dbxref=GenBank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=CCO57_RS18390;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 29211 30404 . + . ID=gene-CCO57_RS18395;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=CCO57_RS18395;old_locus_tag=CCO57_18375 NZ_NPMC01000012.1 Protein Homology CDS 29211 30404 . + 0 ID=cds-WP_001818570.1;Parent=gene-CCO57_RS18395;Dbxref=GenBank:WP_001818570.1;Name=WP_001818570.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=CCO57_RS18395;product=aromatic amino acid transaminase;protein_id=WP_001818570.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 30591 31304 . + . ID=gene-CCO57_RS18400;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=CCO57_RS18400;old_locus_tag=CCO57_18380 NZ_NPMC01000012.1 Protein Homology CDS 30591 31304 . + 0 ID=cds-WP_000724436.1;Parent=gene-CCO57_RS18400;Dbxref=GenBank:WP_000724436.1;Name=WP_000724436.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=CCO57_RS18400;product=acid phosphatase AphA;protein_id=WP_000724436.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 31433 31849 . + . ID=gene-CCO57_RS18405;Name=CCO57_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18405;old_locus_tag=CCO57_18385 NZ_NPMC01000012.1 Protein Homology CDS 31433 31849 . + 0 ID=cds-WP_000270392.1;Parent=gene-CCO57_RS18405;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=CCO57_RS18405;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 31852 32208 . + . ID=gene-CCO57_RS18410;Name=CCO57_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18410;old_locus_tag=CCO57_18390 NZ_NPMC01000012.1 Protein Homology CDS 31852 32208 . + 0 ID=cds-WP_000155665.1;Parent=gene-CCO57_RS18410;Dbxref=GenBank:WP_000155665.1;Name=WP_000155665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=CCO57_RS18410;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 32209 32550 . - . ID=gene-CCO57_RS18415;Name=CCO57_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18415;old_locus_tag=CCO57_18395 NZ_NPMC01000012.1 Protein Homology CDS 32209 32550 . - 0 ID=cds-WP_094915069.1;Parent=gene-CCO57_RS18415;Dbxref=GenBank:WP_094915069.1;Name=WP_094915069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=CCO57_RS18415;product=hypothetical protein;protein_id=WP_094915069.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 32537 32992 . - . ID=gene-CCO57_RS18420;Name=CCO57_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18420;old_locus_tag=CCO57_18400 NZ_NPMC01000012.1 Protein Homology CDS 32537 32992 . - 0 ID=cds-WP_094915070.1;Parent=gene-CCO57_RS18420;Dbxref=GenBank:WP_094915070.1;Name=WP_094915070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=CCO57_RS18420;product=hypothetical protein;protein_id=WP_094915070.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 33124 35949 . - . ID=gene-CCO57_RS18425;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CCO57_RS18425;old_locus_tag=CCO57_18405 NZ_NPMC01000012.1 Protein Homology CDS 33124 35949 . - 0 ID=cds-WP_000357725.1;Parent=gene-CCO57_RS18425;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=CCO57_RS18425;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 36197 36727 . + . ID=gene-CCO57_RS18435;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=CCO57_RS18435;old_locus_tag=CCO57_18415 NZ_NPMC01000012.1 Protein Homology CDS 36197 36727 . + 0 ID=cds-WP_000168322.1;Parent=gene-CCO57_RS18435;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=CCO57_RS18435;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 37767 38399 . + . ID=gene-CCO57_RS18450;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=CCO57_RS18450;old_locus_tag=CCO57_18430 NZ_NPMC01000012.1 Protein Homology CDS 37767 38399 . + 0 ID=cds-WP_000389240.1;Parent=gene-CCO57_RS18450;Dbxref=GenBank:WP_000389240.1;Name=WP_000389240.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=CCO57_RS18450;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389240.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 38396 39784 . + . ID=gene-CCO57_RS18455;Name=CCO57_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18455;old_locus_tag=CCO57_18435 NZ_NPMC01000012.1 Protein Homology CDS 38396 39784 . + 0 ID=cds-WP_000875200.1;Parent=gene-CCO57_RS18455;Dbxref=GenBank:WP_000875200.1;Name=WP_000875200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=CCO57_RS18455;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_000875200.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 39774 41093 . + . ID=gene-CCO57_RS18460;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=CCO57_RS18460;old_locus_tag=CCO57_18440 NZ_NPMC01000012.1 Protein Homology CDS 39774 41093 . + 0 ID=cds-WP_001749704.1;Parent=gene-CCO57_RS18460;Dbxref=GenBank:WP_001749704.1;Name=WP_001749704.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=CCO57_RS18460;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_001749704.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 41090 42367 . + . ID=gene-CCO57_RS18465;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=CCO57_RS18465;old_locus_tag=CCO57_18445 NZ_NPMC01000012.1 Protein Homology CDS 41090 42367 . + 0 ID=cds-WP_001081935.1;Parent=gene-CCO57_RS18465;Dbxref=GenBank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=CCO57_RS18465;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 42384 59069 . + . ID=gene-CCO57_RS18470;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=CCO57_RS18470;old_locus_tag=CCO57_18450 NZ_NPMC01000012.1 Protein Homology CDS 42384 59069 . + 0 ID=cds-WP_079965667.1;Parent=gene-CCO57_RS18470;Dbxref=GenBank:WP_079965667.1;Name=WP_079965667.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO57_RS18470;product=non-fimbrial adhesin SiiE;protein_id=WP_079965667.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 59109 61175 . + . ID=gene-CCO57_RS18475;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=CCO57_RS18475;old_locus_tag=CCO57_18455 NZ_NPMC01000012.1 Protein Homology CDS 59109 61175 . + 0 ID=cds-WP_000358575.1;Parent=gene-CCO57_RS18475;Dbxref=GenBank:WP_000358575.1;Name=WP_000358575.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954991.1;locus_tag=CCO57_RS18475;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358575.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 61452 61733 . - . ID=gene-CCO57_RS18480;Name=CCO57_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18480;old_locus_tag=CCO57_18460 NZ_NPMC01000012.1 Protein Homology CDS 61452 61733 . - 0 ID=cds-WP_000719058.1;Parent=gene-CCO57_RS18480;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=CCO57_RS18480;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 62297 63898 . + . ID=gene-CCO57_RS18485;Name=CCO57_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18485;old_locus_tag=CCO57_18465 NZ_NPMC01000012.1 Protein Homology CDS 62297 63898 . + 0 ID=cds-WP_000083658.1;Parent=gene-CCO57_RS18485;Dbxref=GenBank:WP_000083658.1;Name=WP_000083658.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=CCO57_RS18485;product=EAL domain-containing protein;protein_id=WP_000083658.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 63886 64209 . - . ID=gene-CCO57_RS18490;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=CCO57_RS18490;old_locus_tag=CCO57_18470 NZ_NPMC01000012.1 Protein Homology CDS 63886 64209 . - 0 ID=cds-WP_000019483.1;Parent=gene-CCO57_RS18490;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=CCO57_RS18490;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 64296 64754 . + . ID=gene-CCO57_RS18495;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=CCO57_RS18495;old_locus_tag=CCO57_18475 NZ_NPMC01000012.1 Protein Homology CDS 64296 64754 . + 0 ID=cds-WP_000412686.1;Parent=gene-CCO57_RS18495;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=CCO57_RS18495;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 65047 65715 . + . ID=gene-CCO57_RS18500;Name=CCO57_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18500;old_locus_tag=CCO57_18480 NZ_NPMC01000012.1 Protein Homology CDS 65047 65715 . + 0 ID=cds-WP_000958575.1;Parent=gene-CCO57_RS18500;Dbxref=GenBank:WP_000958575.1;Name=WP_000958575.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=CCO57_RS18500;product=glutathione S-transferase family protein;protein_id=WP_000958575.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 66062 67411 . + . ID=gene-CCO57_RS18510;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=CCO57_RS18510;old_locus_tag=CCO57_18490 NZ_NPMC01000012.1 Protein Homology CDS 66062 67411 . + 0 ID=cds-WP_000106907.1;Parent=gene-CCO57_RS18510;Dbxref=GenBank:WP_000106907.1;Name=WP_000106907.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=CCO57_RS18510;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106907.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 67561 69207 . + . ID=gene-CCO57_RS18520;Name=CCO57_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18520;old_locus_tag=CCO57_18500 NZ_NPMC01000012.1 Protein Homology CDS 67561 69207 . + 0 ID=cds-WP_001549778.1;Parent=gene-CCO57_RS18520;Dbxref=GenBank:WP_001549778.1;Name=WP_001549778.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=CCO57_RS18520;product=Na+/H+ antiporter;protein_id=WP_001549778.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 69302 70189 . - . ID=gene-CCO57_RS18525;Name=CCO57_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18525;old_locus_tag=CCO57_18505 NZ_NPMC01000012.1 Protein Homology CDS 69302 70189 . - 0 ID=cds-WP_000354962.1;Parent=gene-CCO57_RS18525;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=CCO57_RS18525;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 70293 70703 . + . ID=gene-CCO57_RS18530;Name=CCO57_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18530;old_locus_tag=CCO57_18510 NZ_NPMC01000012.1 Protein Homology CDS 70293 70703 . + 0 ID=cds-WP_000257347.1;Parent=gene-CCO57_RS18530;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=CCO57_RS18530;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 70696 71385 . + . ID=gene-CCO57_RS18535;Name=CCO57_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18535;old_locus_tag=CCO57_18515 NZ_NPMC01000012.1 Protein Homology CDS 70696 71385 . + 0 ID=cds-WP_001067096.1;Parent=gene-CCO57_RS18535;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=CCO57_RS18535;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 71424 73073 . - . ID=gene-CCO57_RS18540;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=CCO57_RS18540;old_locus_tag=CCO57_18520 NZ_NPMC01000012.1 Protein Homology CDS 71424 73073 . - 0 ID=cds-WP_000832536.1;Parent=gene-CCO57_RS18540;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=CCO57_RS18540;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 73070 73384 . - . ID=gene-CCO57_RS18545;Name=CCO57_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18545;old_locus_tag=CCO57_18525 NZ_NPMC01000012.1 Protein Homology CDS 73070 73384 . - 0 ID=cds-WP_000999620.1;Parent=gene-CCO57_RS18545;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=CCO57_RS18545;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 73624 75582 . - . ID=gene-CCO57_RS18550;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=CCO57_RS18550;old_locus_tag=CCO57_18530 NZ_NPMC01000012.1 Protein Homology CDS 73624 75582 . - 0 ID=cds-WP_000083877.1;Parent=gene-CCO57_RS18550;Dbxref=GenBank:WP_000083877.1;Name=WP_000083877.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=CCO57_RS18550;product=acetate--CoA ligase;protein_id=WP_000083877.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 76014 77450 . + . ID=gene-CCO57_RS18560;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=CCO57_RS18560;old_locus_tag=CCO57_18540 NZ_NPMC01000012.1 Protein Homology CDS 76014 77450 . + 0 ID=cds-WP_000101784.1;Parent=gene-CCO57_RS18560;Dbxref=GenBank:WP_000101784.1;Name=WP_000101784.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=CCO57_RS18560;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000101784.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 77495 78061 . + . ID=gene-CCO57_RS18565;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=CCO57_RS18565;old_locus_tag=CCO57_18545 NZ_NPMC01000012.1 Protein Homology CDS 77495 78061 . + 0 ID=cds-WP_094915071.1;Parent=gene-CCO57_RS18565;Dbxref=GenBank:WP_094915071.1;Name=WP_094915071.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=CCO57_RS18565;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_094915071.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 78058 78729 . + . ID=gene-CCO57_RS18570;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=CCO57_RS18570;old_locus_tag=CCO57_18550 NZ_NPMC01000012.1 Protein Homology CDS 78058 78729 . + 0 ID=cds-WP_001278032.1;Parent=gene-CCO57_RS18570;Dbxref=GenBank:WP_001278032.1;Name=WP_001278032.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=CCO57_RS18570;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278032.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 78726 79682 . + . ID=gene-CCO57_RS18575;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=CCO57_RS18575;old_locus_tag=CCO57_18555 NZ_NPMC01000012.1 Protein Homology CDS 78726 79682 . + 0 ID=cds-WP_031569835.1;Parent=gene-CCO57_RS18575;Dbxref=GenBank:WP_031569835.1;Name=WP_031569835.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=CCO57_RS18575;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_031569835.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 79675 81411 . + . ID=gene-CCO57_RS18580;Name=CCO57_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18580;old_locus_tag=CCO57_18560 NZ_NPMC01000012.1 Protein Homology CDS 79675 81411 . + 0 ID=cds-WP_031615756.1;Parent=gene-CCO57_RS18580;Dbxref=GenBank:WP_031615756.1;Name=WP_031615756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507453.1;locus_tag=CCO57_RS18580;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_031615756.1;transl_table=11 NZ_NPMC01000012.1 RefSeq pseudogene 81494 81913 . + . ID=gene-CCO57_RS25030;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=CCO57_RS25030;old_locus_tag=CCO57_18565;partial=true;pseudo=true;start_range=.,81494 NZ_NPMC01000012.1 Protein Homology CDS 81494 81913 . + 0 ID=cds-CCO57_RS25030;Parent=gene-CCO57_RS25030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO57_RS25030;partial=true;product=heme lyase NrfEFG subunit NrfF;pseudo=true;start_range=.,81494;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 81910 82530 . + . ID=gene-CCO57_RS18590;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=CCO57_RS18590;old_locus_tag=CCO57_18570 NZ_NPMC01000012.1 Protein Homology CDS 81910 82530 . + 0 ID=cds-WP_000083233.1;Parent=gene-CCO57_RS18590;Dbxref=GenBank:WP_000083233.1;Name=WP_000083233.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=CCO57_RS18590;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000083233.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 82875 84185 . + . ID=gene-CCO57_RS18595;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=CCO57_RS18595;old_locus_tag=CCO57_18575 NZ_NPMC01000012.1 Protein Homology CDS 82875 84185 . + 0 ID=cds-WP_000793278.1;Parent=gene-CCO57_RS18595;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=CCO57_RS18595;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11 NZ_NPMC01000012.1 RefSeq pseudogene 84190 84266 . + . ID=gene-CCO57_RS25035;Name=CCO57_RS25035;end_range=84266,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25035;partial=true;pseudo=true;start_range=.,84190 NZ_NPMC01000012.1 Protein Homology CDS 84190 84266 . + 0 ID=cds-CCO57_RS25035;Parent=gene-CCO57_RS25035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=84266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO57_RS25035;partial=true;product=hypothetical protein;pseudo=true;start_range=.,84190;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 84343 85032 . - . ID=gene-CCO57_RS18600;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=CCO57_RS18600;old_locus_tag=CCO57_18580 NZ_NPMC01000012.1 Protein Homology CDS 84343 85032 . - 0 ID=cds-WP_000803307.1;Parent=gene-CCO57_RS18600;Dbxref=GenBank:WP_000803307.1;Name=WP_000803307.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=CCO57_RS18600;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000803307.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 85209 87356 . - . ID=gene-CCO57_RS18605;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=CCO57_RS18605;old_locus_tag=CCO57_18585 NZ_NPMC01000012.1 Protein Homology CDS 85209 87356 . - 0 ID=cds-WP_094915072.1;Parent=gene-CCO57_RS18605;Dbxref=GenBank:WP_094915072.1;Name=WP_094915072.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=CCO57_RS18605;product=formate dehydrogenase subunit alpha;protein_id=WP_094915072.1;transl_except=(pos:complement(86937..86939)%2Caa:Sec);transl_table=11 NZ_NPMC01000012.1 RefSeq gene 87727 88635 . - . ID=gene-CCO57_RS18610;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=CCO57_RS18610;old_locus_tag=CCO57_18590 NZ_NPMC01000012.1 Protein Homology CDS 87727 88635 . - 0 ID=cds-WP_000457033.1;Parent=gene-CCO57_RS18610;Dbxref=GenBank:WP_000457033.1;Name=WP_000457033.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=CCO57_RS18610;product=lipid A hydroxylase LpxO;protein_id=WP_000457033.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 88893 89327 . - . ID=gene-CCO57_RS18615;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=CCO57_RS18615;old_locus_tag=CCO57_18595 NZ_NPMC01000012.1 Protein Homology CDS 88893 89327 . - 0 ID=cds-WP_001527229.1;Parent=gene-CCO57_RS18615;Dbxref=GenBank:WP_001527229.1;Name=WP_001527229.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=CCO57_RS18615;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001527229.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 89479 89922 . - . ID=gene-CCO57_RS18620;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=CCO57_RS18620;old_locus_tag=CCO57_18600 NZ_NPMC01000012.1 Protein Homology CDS 89479 89922 . - 0 ID=cds-WP_001131298.1;Parent=gene-CCO57_RS18620;Dbxref=GenBank:WP_001131298.1;Name=WP_001131298.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=CCO57_RS18620;product=VOC family metalloprotein YjdN;protein_id=WP_001131298.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 90042 90377 . - . ID=gene-CCO57_RS18625;Name=CCO57_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18625;old_locus_tag=CCO57_18605 NZ_NPMC01000012.1 Protein Homology CDS 90042 90377 . - 0 ID=cds-WP_000056482.1;Parent=gene-CCO57_RS18625;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=CCO57_RS18625;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 90845 92347 . + . ID=gene-CCO57_RS18630;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=CCO57_RS18630;old_locus_tag=CCO57_18610 NZ_NPMC01000012.1 Protein Homology CDS 90845 92347 . + 0 ID=cds-WP_000919710.1;Parent=gene-CCO57_RS18630;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=CCO57_RS18630;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 92417 92506 . + . ID=gene-CCO57_RS18635;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=CCO57_RS18635;old_locus_tag=CCO57_18615 NZ_NPMC01000012.1 Protein Homology CDS 92417 92506 . + 0 ID=cds-WP_000844399.1;Parent=gene-CCO57_RS18635;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=CCO57_RS18635;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 92514 93584 . - . ID=gene-CCO57_RS18640;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=CCO57_RS18640;old_locus_tag=CCO57_18620 NZ_NPMC01000012.1 Protein Homology CDS 92514 93584 . - 0 ID=cds-WP_001212189.1;Parent=gene-CCO57_RS18640;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=CCO57_RS18640;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 93594 94262 . - . ID=gene-CCO57_RS18645;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=CCO57_RS18645;old_locus_tag=CCO57_18625 NZ_NPMC01000012.1 Protein Homology CDS 93594 94262 . - 0 ID=cds-WP_000697899.1;Parent=gene-CCO57_RS18645;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=CCO57_RS18645;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 94259 95902 . - . ID=gene-CCO57_RS18650;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=CCO57_RS18650;old_locus_tag=CCO57_18630 NZ_NPMC01000012.1 Protein Homology CDS 94259 95902 . - 0 ID=cds-WP_000919296.1;Parent=gene-CCO57_RS18650;Dbxref=GenBank:WP_000919296.1;Name=WP_000919296.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=CCO57_RS18650;product=phosphoethanolamine transferase EptA;protein_id=WP_000919296.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 96036 97373 . - . ID=gene-CCO57_RS18655;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=CCO57_RS18655;old_locus_tag=CCO57_18635 NZ_NPMC01000012.1 Protein Homology CDS 96036 97373 . - 0 ID=cds-WP_000093130.1;Parent=gene-CCO57_RS18655;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=CCO57_RS18655;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 97513 98274 . - . ID=gene-CCO57_RS18660;Name=CCO57_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18660;old_locus_tag=CCO57_18640 NZ_NPMC01000012.1 Protein Homology CDS 97513 98274 . - 0 ID=cds-WP_023232997.1;Parent=gene-CCO57_RS18660;Dbxref=GenBank:WP_023232997.1;Name=WP_023232997.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=CCO57_RS18660;product=AraC family transcriptional regulator;protein_id=WP_023232997.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 98572 100839 . - . ID=gene-CCO57_RS18665;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=CCO57_RS18665;old_locus_tag=CCO57_18645 NZ_NPMC01000012.1 Protein Homology CDS 98572 100839 . - 0 ID=cds-WP_001542850.1;Parent=gene-CCO57_RS18665;Dbxref=GenBank:WP_001542850.1;Name=WP_001542850.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=CCO57_RS18665;product=arginine decarboxylase;protein_id=WP_001542850.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 101072 102004 . - . ID=gene-CCO57_RS18670;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=CCO57_RS18670;old_locus_tag=CCO57_18650 NZ_NPMC01000012.1 Protein Homology CDS 101072 102004 . - 0 ID=cds-WP_000106992.1;Parent=gene-CCO57_RS18670;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=CCO57_RS18670;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 102273 103628 . + . ID=gene-CCO57_RS18675;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=CCO57_RS18675;old_locus_tag=CCO57_18655 NZ_NPMC01000012.1 Protein Homology CDS 102273 103628 . + 0 ID=cds-WP_001666042.1;Parent=gene-CCO57_RS18675;Dbxref=GenBank:WP_001666042.1;Name=WP_001666042.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=CCO57_RS18675;product=alpha-galactosidase;protein_id=WP_001666042.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 103712 105142 . + . ID=gene-CCO57_RS18680;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CCO57_RS18680;old_locus_tag=CCO57_18660 NZ_NPMC01000012.1 Protein Homology CDS 103712 105142 . + 0 ID=cds-WP_000028070.1;Parent=gene-CCO57_RS18680;Dbxref=GenBank:WP_000028070.1;Name=WP_000028070.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=CCO57_RS18680;product=melibiose:sodium transporter MelB;protein_id=WP_000028070.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 105231 106877 . - . ID=gene-CCO57_RS18685;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=CCO57_RS18685;old_locus_tag=CCO57_18665 NZ_NPMC01000012.1 Protein Homology CDS 105231 106877 . - 0 ID=cds-WP_094915073.1;Parent=gene-CCO57_RS18685;Dbxref=GenBank:WP_094915073.1;Name=WP_094915073.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=CCO57_RS18685;product=class I fumarate hydratase FumA;protein_id=WP_094915073.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 106973 108313 . - . ID=gene-CCO57_RS18690;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=CCO57_RS18690;old_locus_tag=CCO57_18670 NZ_NPMC01000012.1 Protein Homology CDS 106973 108313 . - 0 ID=cds-WP_000899149.1;Parent=gene-CCO57_RS18690;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=CCO57_RS18690;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 108460 108726 . - . ID=gene-CCO57_RS18695;Name=CCO57_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18695;old_locus_tag=CCO57_18675 NZ_NPMC01000012.1 Protein Homology CDS 108460 108726 . - 0 ID=cds-WP_001642024.1;Parent=gene-CCO57_RS18695;Dbxref=GenBank:WP_001642024.1;Name=WP_001642024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=CCO57_RS18695;product=hypothetical protein;protein_id=WP_001642024.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 109043 109762 . - . ID=gene-CCO57_RS18700;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=CCO57_RS18700;old_locus_tag=CCO57_18680 NZ_NPMC01000012.1 Protein Homology CDS 109043 109762 . - 0 ID=cds-WP_000611307.1;Parent=gene-CCO57_RS18700;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=CCO57_RS18700;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 109759 111390 . - . ID=gene-CCO57_RS18705;Name=CCO57_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18705;old_locus_tag=CCO57_18685 NZ_NPMC01000012.1 Protein Homology CDS 109759 111390 . - 0 ID=cds-WP_023212838.1;Parent=gene-CCO57_RS18705;Dbxref=GenBank:WP_023212838.1;Name=WP_023212838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=CCO57_RS18705;product=sensor histidine kinase;protein_id=WP_023212838.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 111765 114194 . + . ID=gene-CCO57_RS18710;Name=CCO57_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18710;old_locus_tag=CCO57_18690 NZ_NPMC01000012.1 Protein Homology CDS 111765 114194 . + 0 ID=cds-WP_023137204.1;Parent=gene-CCO57_RS18710;Dbxref=GenBank:WP_023137204.1;Name=WP_023137204.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=CCO57_RS18710;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_023137204.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 114208 114834 . + . ID=gene-CCO57_RS18715;Name=CCO57_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18715;old_locus_tag=CCO57_18695 NZ_NPMC01000012.1 Protein Homology CDS 114208 114834 . + 0 ID=cds-WP_094915074.1;Parent=gene-CCO57_RS18715;Dbxref=GenBank:WP_094915074.1;Name=WP_094915074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=CCO57_RS18715;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_094915074.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 114827 115600 . + . ID=gene-CCO57_RS18720;Name=CCO57_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18720;old_locus_tag=CCO57_18700 NZ_NPMC01000012.1 Protein Homology CDS 114827 115600 . + 0 ID=cds-WP_000544926.1;Parent=gene-CCO57_RS18720;Dbxref=GenBank:WP_000544926.1;Name=WP_000544926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=CCO57_RS18720;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544926.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 115676 116269 . + . ID=gene-CCO57_RS18725;Name=CCO57_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18725;old_locus_tag=CCO57_18705 NZ_NPMC01000012.1 Protein Homology CDS 115676 116269 . + 0 ID=cds-WP_001542855.1;Parent=gene-CCO57_RS18725;Dbxref=GenBank:WP_001542855.1;Name=WP_001542855.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=CCO57_RS18725;product=TorD/DmsD family molecular chaperone;protein_id=WP_001542855.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 116353 117753 . - . ID=gene-CCO57_RS18730;Name=CCO57_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18730;old_locus_tag=CCO57_18710 NZ_NPMC01000012.1 Protein Homology CDS 116353 117753 . - 0 ID=cds-WP_094915075.1;Parent=gene-CCO57_RS18730;Dbxref=GenBank:WP_094915075.1;Name=WP_094915075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=CCO57_RS18730;product=DUF7594 domain-containing protein;protein_id=WP_094915075.1;transl_table=11 NZ_NPMC01000012.1 RefSeq gene 118057 118962 . + . ID=gene-CCO57_RS18735;Name=CCO57_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18735;old_locus_tag=CCO57_18715 NZ_NPMC01000012.1 Protein Homology CDS 118057 118962 . + 0 ID=cds-WP_001268200.1;Parent=gene-CCO57_RS18735;Dbxref=GenBank:WP_001268200.1;Name=WP_001268200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=CCO57_RS18735;product=SdiA-regulated domain-containing protein;protein_id=WP_001268200.1;transl_table=11 NZ_NPMC01000012.1 RefSeq pseudogene 119257 119391 . - . ID=gene-CCO57_RS24680;Name=CCO57_RS24680;end_range=119391,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24680;partial=true;pseudo=true NZ_NPMC01000012.1 Protein Homology CDS 119257 119391 . - 0 ID=cds-CCO57_RS24680;Parent=gene-CCO57_RS24680;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=119391,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=CCO57_RS24680;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_NPMC01000013.1 1 105020 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000013.1 RefSeq region 1 105020 . + . ID=NZ_NPMC01000013.1:1..105020;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000013.1 RefSeq gene 1 103 . + . ID=gene-CCO57_RS18745;Name=CCO57_RS18745;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS18745;old_locus_tag=CCO57_18725;partial=true;start_range=.,1 NZ_NPMC01000013.1 cmsearch rRNA 1 103 . + . ID=rna-CCO57_RS18745;Parent=gene-CCO57_RS18745;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS18745;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMC01000013.1 cmsearch exon 1 103 . + . ID=exon-CCO57_RS18745-1;Parent=rna-CCO57_RS18745;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS18745;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMC01000013.1 RefSeq gene 300 415 . + . ID=gene-CCO57_RS18750;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO57_RS18750;old_locus_tag=CCO57_18730 NZ_NPMC01000013.1 cmsearch rRNA 300 415 . + . ID=rna-CCO57_RS18750;Parent=gene-CCO57_RS18750;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS18750;product=5S ribosomal RNA NZ_NPMC01000013.1 cmsearch exon 300 415 . + . ID=exon-CCO57_RS18750-1;Parent=rna-CCO57_RS18750;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS18750;product=5S ribosomal RNA NZ_NPMC01000013.1 RefSeq gene 430 505 . + . ID=gene-CCO57_RS18755;Name=CCO57_RS18755;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS18755;old_locus_tag=CCO57_18735 NZ_NPMC01000013.1 tRNAscan-SE tRNA 430 505 . + . ID=rna-CCO57_RS18755;Parent=gene-CCO57_RS18755;anticodon=(pos:463..465);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS18755;product=tRNA-Thr NZ_NPMC01000013.1 tRNAscan-SE exon 430 505 . + . ID=exon-CCO57_RS18755-1;Parent=rna-CCO57_RS18755;anticodon=(pos:463..465);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS18755;product=tRNA-Thr NZ_NPMC01000013.1 RefSeq gene 545 660 . + . ID=gene-CCO57_RS18760;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO57_RS18760;old_locus_tag=CCO57_18740 NZ_NPMC01000013.1 cmsearch rRNA 545 660 . + . ID=rna-CCO57_RS18760;Parent=gene-CCO57_RS18760;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS18760;product=5S ribosomal RNA NZ_NPMC01000013.1 cmsearch exon 545 660 . + . ID=exon-CCO57_RS18760-1;Parent=rna-CCO57_RS18760;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS18760;product=5S ribosomal RNA NZ_NPMC01000013.1 RefSeq gene 1657 1878 . - . ID=gene-CCO57_RS18770;Name=CCO57_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18770;old_locus_tag=CCO57_18750 NZ_NPMC01000013.1 Protein Homology CDS 1657 1878 . - 0 ID=cds-WP_000825645.1;Parent=gene-CCO57_RS18770;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=CCO57_RS18770;product=membrane protein;protein_id=WP_000825645.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 2116 5229 . - . ID=gene-CCO57_RS18775;Name=CCO57_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18775;old_locus_tag=CCO57_18755 NZ_NPMC01000013.1 Protein Homology CDS 2116 5229 . - 0 ID=cds-WP_094915076.1;Parent=gene-CCO57_RS18775;Dbxref=GenBank:WP_094915076.1;Name=WP_094915076.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=CCO57_RS18775;product=efflux RND transporter permease subunit;protein_id=WP_094915076.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 5241 6398 . - . ID=gene-CCO57_RS18780;Name=CCO57_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18780;old_locus_tag=CCO57_18760 NZ_NPMC01000013.1 Protein Homology CDS 5241 6398 . - 0 ID=cds-WP_000160383.1;Parent=gene-CCO57_RS18780;Dbxref=GenBank:WP_000160383.1;Name=WP_000160383.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=CCO57_RS18780;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160383.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 6811 7473 . + . ID=gene-CCO57_RS18785;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=CCO57_RS18785;old_locus_tag=CCO57_18765 NZ_NPMC01000013.1 Protein Homology CDS 6811 7473 . + 0 ID=cds-WP_094915077.1;Parent=gene-CCO57_RS18785;Dbxref=GenBank:WP_094915077.1;Name=WP_094915077.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=CCO57_RS18785;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_094915077.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 7476 9575 . - . ID=gene-CCO57_RS18790;Name=CCO57_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18790;old_locus_tag=CCO57_18770 NZ_NPMC01000013.1 Protein Homology CDS 7476 9575 . - 0 ID=cds-WP_001145337.1;Parent=gene-CCO57_RS18790;Dbxref=GenBank:WP_001145337.1;Name=WP_001145337.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=CCO57_RS18790;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_001145337.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 9725 9889 . - . ID=gene-CCO57_RS18795;Name=CCO57_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18795;old_locus_tag=CCO57_18775 NZ_NPMC01000013.1 Protein Homology CDS 9725 9889 . - 0 ID=cds-WP_000620015.1;Parent=gene-CCO57_RS18795;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=CCO57_RS18795;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 9972 10856 . - . ID=gene-CCO57_RS18800;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=CCO57_RS18800;old_locus_tag=CCO57_18780 NZ_NPMC01000013.1 Protein Homology CDS 9972 10856 . - 0 ID=cds-WP_000642611.1;Parent=gene-CCO57_RS18800;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=CCO57_RS18800;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 10942 11238 . - . ID=gene-CCO57_RS18805;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=CCO57_RS18805;old_locus_tag=CCO57_18785 NZ_NPMC01000013.1 Protein Homology CDS 10942 11238 . - 0 ID=cds-WP_000462905.1;Parent=gene-CCO57_RS18805;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=CCO57_RS18805;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 11264 12229 . - . ID=gene-CCO57_RS18810;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CCO57_RS18810;old_locus_tag=CCO57_18790 NZ_NPMC01000013.1 Protein Homology CDS 11264 12229 . - 0 ID=cds-WP_001219664.1;Parent=gene-CCO57_RS18810;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=CCO57_RS18810;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 12890 13771 . - . ID=gene-CCO57_RS18815;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CCO57_RS18815;old_locus_tag=CCO57_18795 NZ_NPMC01000013.1 Protein Homology CDS 12890 13771 . - 0 ID=cds-WP_023137162.1;Parent=gene-CCO57_RS18815;Dbxref=GenBank:WP_023137162.1;Name=WP_023137162.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=CCO57_RS18815;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_023137162.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 13783 15234 . - . ID=gene-CCO57_RS18820;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=CCO57_RS18820;old_locus_tag=CCO57_18800 NZ_NPMC01000013.1 Protein Homology CDS 13783 15234 . - 0 ID=cds-WP_001175682.1;Parent=gene-CCO57_RS18820;Dbxref=GenBank:WP_001175682.1;Name=WP_001175682.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=CCO57_RS18820;product=sodium/pantothenate symporter;protein_id=WP_001175682.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 15224 15466 . - . ID=gene-CCO57_RS18825;Name=CCO57_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18825;old_locus_tag=CCO57_18805 NZ_NPMC01000013.1 Protein Homology CDS 15224 15466 . - 0 ID=cds-WP_000340017.1;Parent=gene-CCO57_RS18825;Dbxref=GenBank:WP_000340017.1;Name=WP_000340017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=CCO57_RS18825;product=YhdT family protein;protein_id=WP_000340017.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 15575 16924 . - . ID=gene-CCO57_RS18830;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CCO57_RS18830;old_locus_tag=CCO57_18810 NZ_NPMC01000013.1 Protein Homology CDS 15575 16924 . - 0 ID=cds-WP_000884627.1;Parent=gene-CCO57_RS18830;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=CCO57_RS18830;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 16935 17405 . - . ID=gene-CCO57_RS18835;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CCO57_RS18835;old_locus_tag=CCO57_18815 NZ_NPMC01000013.1 Protein Homology CDS 16935 17405 . - 0 ID=cds-WP_000354628.1;Parent=gene-CCO57_RS18835;Dbxref=GenBank:WP_000354628.1;Name=WP_000354628.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=CCO57_RS18835;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354628.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 17798 18397 . - . ID=gene-CCO57_RS18840;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=CCO57_RS18840;old_locus_tag=CCO57_18820 NZ_NPMC01000013.1 Protein Homology CDS 17798 18397 . - 0 ID=cds-WP_001240053.1;Parent=gene-CCO57_RS18840;Dbxref=GenBank:WP_001240053.1;Name=WP_001240053.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=CCO57_RS18840;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240053.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 18398 19402 . - . ID=gene-CCO57_RS18845;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=CCO57_RS18845;old_locus_tag=CCO57_18825 NZ_NPMC01000013.1 Protein Homology CDS 18398 19402 . - 0 ID=cds-WP_094915078.1;Parent=gene-CCO57_RS18845;Dbxref=GenBank:WP_094915078.1;Name=WP_094915078.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=CCO57_RS18845;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_094915078.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 19515 20489 . - . ID=gene-CCO57_RS18850;Name=CCO57_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18850;old_locus_tag=CCO57_18830 NZ_NPMC01000013.1 Protein Homology CDS 19515 20489 . - 0 ID=cds-WP_094888753.1;Parent=gene-CCO57_RS18850;Dbxref=GenBank:WP_094888753.1;Name=WP_094888753.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=CCO57_RS18850;product=MDR family oxidoreductase;protein_id=WP_094888753.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 20693 22633 . + . ID=gene-CCO57_RS18855;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=CCO57_RS18855;old_locus_tag=CCO57_18835 NZ_NPMC01000013.1 Protein Homology CDS 20693 22633 . + 0 ID=cds-WP_001241381.1;Parent=gene-CCO57_RS18855;Dbxref=GenBank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=CCO57_RS18855;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 22941 23984 . + . ID=gene-CCO57_RS18870;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=CCO57_RS18870;old_locus_tag=CCO57_18850 NZ_NPMC01000013.1 Protein Homology CDS 22941 23984 . + 0 ID=cds-WP_000913396.1;Parent=gene-CCO57_RS18870;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=CCO57_RS18870;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 24049 25101 . + . ID=gene-CCO57_RS18875;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CCO57_RS18875;old_locus_tag=CCO57_18855 NZ_NPMC01000013.1 Protein Homology CDS 24049 25101 . + 0 ID=cds-WP_000802538.1;Parent=gene-CCO57_RS18875;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=CCO57_RS18875;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 25104 25592 . + . ID=gene-CCO57_RS18880;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CCO57_RS18880;old_locus_tag=CCO57_18860 NZ_NPMC01000013.1 Protein Homology CDS 25104 25592 . + 0 ID=cds-WP_000179403.1;Parent=gene-CCO57_RS18880;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=CCO57_RS18880;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 25601 26194 . + . ID=gene-CCO57_RS18885;Name=CCO57_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18885;old_locus_tag=CCO57_18865 NZ_NPMC01000013.1 Protein Homology CDS 25601 26194 . + 0 ID=cds-WP_000210306.1;Parent=gene-CCO57_RS18885;Dbxref=GenBank:WP_000210306.1;Name=WP_000210306.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=CCO57_RS18885;product=Maf family protein;protein_id=WP_000210306.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 26184 27653 . + . ID=gene-CCO57_RS18890;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=CCO57_RS18890;old_locus_tag=CCO57_18870 NZ_NPMC01000013.1 Protein Homology CDS 26184 27653 . + 0 ID=cds-WP_000123188.1;Parent=gene-CCO57_RS18890;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=CCO57_RS18890;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 27764 31564 . + . ID=gene-CCO57_RS18895;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=CCO57_RS18895;old_locus_tag=CCO57_18875 NZ_NPMC01000013.1 Protein Homology CDS 27764 31564 . + 0 ID=cds-WP_094915079.1;Parent=gene-CCO57_RS18895;Dbxref=GenBank:WP_094915079.1;Name=WP_094915079.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=CCO57_RS18895;product=AsmA2 domain-containing protein YhdP;protein_id=WP_094915079.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 31709 33154 . + . ID=gene-CCO57_RS18900;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=CCO57_RS18900;old_locus_tag=CCO57_18880 NZ_NPMC01000013.1 Protein Homology CDS 31709 33154 . + 0 ID=cds-WP_094915080.1;Parent=gene-CCO57_RS18900;Dbxref=GenBank:WP_094915080.1;Name=WP_094915080.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=CCO57_RS18900;product=metalloprotease TldD;protein_id=WP_094915080.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 33276 34205 . - . ID=gene-CCO57_RS18905;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=CCO57_RS18905;old_locus_tag=CCO57_18885 NZ_NPMC01000013.1 Protein Homology CDS 33276 34205 . - 0 ID=cds-WP_000440300.1;Parent=gene-CCO57_RS18905;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=CCO57_RS18905;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 34387 34590 . + . ID=gene-CCO57_RS18910;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=CCO57_RS18910;old_locus_tag=CCO57_18890 NZ_NPMC01000013.1 Protein Homology CDS 34387 34590 . + 0 ID=cds-WP_000051840.1;Parent=gene-CCO57_RS18910;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=CCO57_RS18910;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 34598 35530 . + . ID=gene-CCO57_RS18915;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=CCO57_RS18915;old_locus_tag=CCO57_18895 NZ_NPMC01000013.1 Protein Homology CDS 34598 35530 . + 0 ID=cds-WP_000855134.1;Parent=gene-CCO57_RS18915;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=CCO57_RS18915;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 35536 37503 . + . ID=gene-CCO57_RS18920;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=CCO57_RS18920;old_locus_tag=CCO57_18900 NZ_NPMC01000013.1 Protein Homology CDS 35536 37503 . + 0 ID=cds-WP_000510913.1;Parent=gene-CCO57_RS18920;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=CCO57_RS18920;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 37675 37947 . + . ID=gene-CCO57_RS18925;Name=CCO57_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18925;old_locus_tag=CCO57_18905 NZ_NPMC01000013.1 Protein Homology CDS 37675 37947 . + 0 ID=cds-WP_001103887.1;Parent=gene-CCO57_RS18925;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=CCO57_RS18925;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 38007 38273 . - . ID=gene-CCO57_RS18930;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=CCO57_RS18930;old_locus_tag=CCO57_18910 NZ_NPMC01000013.1 Protein Homology CDS 38007 38273 . - 0 ID=cds-WP_000853277.1;Parent=gene-CCO57_RS18930;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=CCO57_RS18930;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 38378 38641 . - . ID=gene-CCO57_RS18935;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=CCO57_RS18935;old_locus_tag=CCO57_18915 NZ_NPMC01000013.1 Protein Homology CDS 38378 38641 . - 0 ID=cds-WP_000695693.1;Parent=gene-CCO57_RS18935;Dbxref=GenBank:WP_000695693.1;Name=WP_000695693.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=CCO57_RS18935;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695693.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 39006 39476 . - . ID=gene-CCO57_RS18940;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=CCO57_RS18940;old_locus_tag=CCO57_18920 NZ_NPMC01000013.1 Protein Homology CDS 39006 39476 . - 0 ID=cds-WP_001257852.1;Parent=gene-CCO57_RS18940;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=CCO57_RS18940;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 39891 40829 . + . ID=gene-CCO57_RS18945;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CCO57_RS18945;old_locus_tag=CCO57_18925 NZ_NPMC01000013.1 Protein Homology CDS 39891 40829 . + 0 ID=cds-WP_000861586.1;Parent=gene-CCO57_RS18945;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=CCO57_RS18945;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 40949 41578 . + . ID=gene-CCO57_RS18950;Name=CCO57_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18950;old_locus_tag=CCO57_18930 NZ_NPMC01000013.1 Protein Homology CDS 40949 41578 . + 0 ID=cds-WP_000723776.1;Parent=gene-CCO57_RS18950;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=CCO57_RS18950;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 41565 42230 . + . ID=gene-CCO57_RS18955;Name=CCO57_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18955;old_locus_tag=CCO57_18935 NZ_NPMC01000013.1 Protein Homology CDS 41565 42230 . + 0 ID=cds-WP_001171581.1;Parent=gene-CCO57_RS18955;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=CCO57_RS18955;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 42441 43709 . + . ID=gene-CCO57_RS18960;Name=CCO57_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18960;old_locus_tag=CCO57_18940 NZ_NPMC01000013.1 Protein Homology CDS 42441 43709 . + 0 ID=cds-WP_094915081.1;Parent=gene-CCO57_RS18960;Dbxref=GenBank:WP_094915081.1;Name=WP_094915081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=CCO57_RS18960;product=SLC13 family permease;protein_id=WP_094915081.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 43742 44641 . + . ID=gene-CCO57_RS18965;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=CCO57_RS18965;old_locus_tag=CCO57_18945 NZ_NPMC01000013.1 Protein Homology CDS 43742 44641 . + 0 ID=cds-WP_000045349.1;Parent=gene-CCO57_RS18965;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=CCO57_RS18965;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 44641 45258 . + . ID=gene-CCO57_RS18970;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=CCO57_RS18970;old_locus_tag=CCO57_18950 NZ_NPMC01000013.1 Protein Homology CDS 44641 45258 . + 0 ID=cds-WP_000162405.1;Parent=gene-CCO57_RS18970;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=CCO57_RS18970;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 45415 45663 . + . ID=gene-CCO57_RS18975;Name=CCO57_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18975;old_locus_tag=CCO57_18955 NZ_NPMC01000013.1 Protein Homology CDS 45415 45663 . + 0 ID=cds-WP_001529289.1;Parent=gene-CCO57_RS18975;Dbxref=GenBank:WP_001529289.1;Name=WP_001529289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529289.1;locus_tag=CCO57_RS18975;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001529289.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 45680 47455 . + . ID=gene-CCO57_RS18980;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO57_RS18980;old_locus_tag=CCO57_18960 NZ_NPMC01000013.1 Protein Homology CDS 45680 47455 . + 0 ID=cds-WP_094915082.1;Parent=gene-CCO57_RS18980;Dbxref=GenBank:WP_094915082.1;Name=WP_094915082.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729120.1;locus_tag=CCO57_RS18980;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_094915082.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 47468 48769 . + . ID=gene-CCO57_RS18985;Name=CCO57_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18985;old_locus_tag=CCO57_18965 NZ_NPMC01000013.1 Protein Homology CDS 47468 48769 . + 0 ID=cds-WP_000444830.1;Parent=gene-CCO57_RS18985;Dbxref=GenBank:WP_000444830.1;Name=WP_000444830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO57_RS18985;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444830.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 48789 49520 . + . ID=gene-CCO57_RS18990;Name=CCO57_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS18990;old_locus_tag=CCO57_18970 NZ_NPMC01000013.1 Protein Homology CDS 48789 49520 . + 0 ID=cds-WP_000602024.1;Parent=gene-CCO57_RS18990;Dbxref=GenBank:WP_000602024.1;Name=WP_000602024.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=CCO57_RS18990;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_000602024.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 49554 50624 . - . ID=gene-CCO57_RS18995;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=CCO57_RS18995;old_locus_tag=CCO57_18975 NZ_NPMC01000013.1 Protein Homology CDS 49554 50624 . - 0 ID=cds-WP_000497705.1;Parent=gene-CCO57_RS18995;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=CCO57_RS18995;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 50717 52084 . - . ID=gene-CCO57_RS19000;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=CCO57_RS19000;old_locus_tag=CCO57_18980 NZ_NPMC01000013.1 Protein Homology CDS 50717 52084 . - 0 ID=cds-WP_023212288.1;Parent=gene-CCO57_RS19000;Dbxref=GenBank:WP_023212288.1;Name=WP_023212288.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=CCO57_RS19000;product=serine endoprotease DegQ;protein_id=WP_023212288.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 52241 52639 . - . ID=gene-CCO57_RS19005;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=CCO57_RS19005;old_locus_tag=CCO57_18985 NZ_NPMC01000013.1 Protein Homology CDS 52241 52639 . - 0 ID=cds-WP_001519074.1;Parent=gene-CCO57_RS19005;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=CCO57_RS19005;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 52832 53956 . + . ID=gene-CCO57_RS19010;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=CCO57_RS19010;old_locus_tag=CCO57_18990 NZ_NPMC01000013.1 Protein Homology CDS 52832 53956 . + 0 ID=cds-WP_023212287.1;Parent=gene-CCO57_RS19010;Dbxref=GenBank:WP_023212287.1;Name=WP_023212287.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=CCO57_RS19010;product=cell division protein ZapE;protein_id=WP_023212287.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 54258 54686 . + . ID=gene-CCO57_RS19015;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CCO57_RS19015;old_locus_tag=CCO57_18995 NZ_NPMC01000013.1 Protein Homology CDS 54258 54686 . + 0 ID=cds-WP_000847559.1;Parent=gene-CCO57_RS19015;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=CCO57_RS19015;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 54702 55094 . + . ID=gene-CCO57_RS19020;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CCO57_RS19020;old_locus_tag=CCO57_19000 NZ_NPMC01000013.1 Protein Homology CDS 54702 55094 . + 0 ID=cds-WP_000829815.1;Parent=gene-CCO57_RS19020;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=CCO57_RS19020;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 55408 56046 . + . ID=gene-CCO57_RS19030;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=CCO57_RS19030;old_locus_tag=CCO57_19010 NZ_NPMC01000013.1 Protein Homology CDS 55408 56046 . + 0 ID=cds-WP_000257298.1;Parent=gene-CCO57_RS19030;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=CCO57_RS19030;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 56052 56552 . + . ID=gene-CCO57_RS19035;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=CCO57_RS19035;old_locus_tag=CCO57_19015 NZ_NPMC01000013.1 Protein Homology CDS 56052 56552 . + 0 ID=cds-WP_000366112.1;Parent=gene-CCO57_RS19035;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=CCO57_RS19035;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 56661 57452 . + . ID=gene-CCO57_RS19040;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=CCO57_RS19040;old_locus_tag=CCO57_19020 NZ_NPMC01000013.1 Protein Homology CDS 56661 57452 . + 0 ID=cds-WP_079962534.1;Parent=gene-CCO57_RS19040;Dbxref=GenBank:WP_079962534.1;Name=WP_079962534.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=CCO57_RS19040;product=transcriptional regulator NanR;protein_id=WP_079962534.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 57587 58480 . + . ID=gene-CCO57_RS19045;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=CCO57_RS19045;old_locus_tag=CCO57_19025 NZ_NPMC01000013.1 Protein Homology CDS 57587 58480 . + 0 ID=cds-WP_094915083.1;Parent=gene-CCO57_RS19045;Dbxref=GenBank:WP_094915083.1;Name=WP_094915083.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=CCO57_RS19045;product=N-acetylneuraminate lyase;protein_id=WP_094915083.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 58596 60086 . + . ID=gene-CCO57_RS19050;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=CCO57_RS19050;old_locus_tag=CCO57_19030 NZ_NPMC01000013.1 Protein Homology CDS 58596 60086 . + 0 ID=cds-WP_000108074.1;Parent=gene-CCO57_RS19050;Dbxref=GenBank:WP_000108074.1;Name=WP_000108074.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=CCO57_RS19050;product=sialic acid transporter NanT;protein_id=WP_000108074.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 60133 60822 . + . ID=gene-CCO57_RS19055;Name=CCO57_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19055;old_locus_tag=CCO57_19035 NZ_NPMC01000013.1 Protein Homology CDS 60133 60822 . + 0 ID=cds-WP_000054448.1;Parent=gene-CCO57_RS19055;Dbxref=GenBank:WP_000054448.1;Name=WP_000054448.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=CCO57_RS19055;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054448.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 60819 61694 . + . ID=gene-CCO57_RS19060;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=CCO57_RS19060;old_locus_tag=CCO57_19040 NZ_NPMC01000013.1 Protein Homology CDS 60819 61694 . + 0 ID=cds-WP_000208970.1;Parent=gene-CCO57_RS19060;Dbxref=GenBank:WP_000208970.1;Name=WP_000208970.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=CCO57_RS19060;product=N-acetylmannosamine kinase;protein_id=WP_000208970.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 61691 62158 . + . ID=gene-CCO57_RS19065;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=CCO57_RS19065;old_locus_tag=CCO57_19045 NZ_NPMC01000013.1 Protein Homology CDS 61691 62158 . + 0 ID=cds-WP_000979900.1;Parent=gene-CCO57_RS19065;Dbxref=GenBank:WP_000979900.1;Name=WP_000979900.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=CCO57_RS19065;product=N-acetylneuraminate anomerase;protein_id=WP_000979900.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 62240 63520 . - . ID=gene-CCO57_RS19070;Name=CCO57_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19070;old_locus_tag=CCO57_19050 NZ_NPMC01000013.1 Protein Homology CDS 62240 63520 . - 0 ID=cds-WP_094915084.1;Parent=gene-CCO57_RS19070;Dbxref=GenBank:WP_094915084.1;Name=WP_094915084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=CCO57_RS19070;product=cytosine deaminase;protein_id=WP_094915084.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 63507 64760 . - . ID=gene-CCO57_RS19075;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=CCO57_RS19075;old_locus_tag=CCO57_19055 NZ_NPMC01000013.1 Protein Homology CDS 63507 64760 . - 0 ID=cds-WP_001542969.1;Parent=gene-CCO57_RS19075;Dbxref=GenBank:WP_001542969.1;Name=WP_001542969.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=CCO57_RS19075;product=cytosine permease;protein_id=WP_001542969.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 64878 65981 . - . ID=gene-CCO57_RS19080;Name=CCO57_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19080;old_locus_tag=CCO57_19060 NZ_NPMC01000013.1 Protein Homology CDS 64878 65981 . - 0 ID=cds-WP_094888584.1;Parent=gene-CCO57_RS19080;Dbxref=GenBank:WP_094888584.1;Name=WP_094888584.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=CCO57_RS19080;product=PDDEXK nuclease domain-containing protein;protein_id=WP_094888584.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 66189 67607 . - . ID=gene-CCO57_RS19085;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=CCO57_RS19085;old_locus_tag=CCO57_19065 NZ_NPMC01000013.1 Protein Homology CDS 66189 67607 . - 0 ID=cds-WP_000081633.1;Parent=gene-CCO57_RS19085;Dbxref=GenBank:WP_000081633.1;Name=WP_000081633.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=CCO57_RS19085;product=glutamate synthase subunit GltD;protein_id=WP_000081633.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 67617 72077 . - . ID=gene-CCO57_RS19090;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CCO57_RS19090;old_locus_tag=CCO57_19070 NZ_NPMC01000013.1 Protein Homology CDS 67617 72077 . - 0 ID=cds-WP_094888585.1;Parent=gene-CCO57_RS19090;Dbxref=GenBank:WP_094888585.1;Name=WP_094888585.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=CCO57_RS19090;product=glutamate synthase large subunit;protein_id=WP_094888585.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 72749 73678 . + . ID=gene-CCO57_RS19100;Name=CCO57_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19100;old_locus_tag=CCO57_19080 NZ_NPMC01000013.1 Protein Homology CDS 72749 73678 . + 0 ID=cds-WP_001176878.1;Parent=gene-CCO57_RS19100;Dbxref=GenBank:WP_001176878.1;Name=WP_001176878.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=CCO57_RS19100;product=TIGR01212 family radical SAM protein;protein_id=WP_001176878.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 73772 76108 . + . ID=gene-CCO57_RS19105;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=CCO57_RS19105;old_locus_tag=CCO57_19085 NZ_NPMC01000013.1 Protein Homology CDS 73772 76108 . + 0 ID=cds-WP_000809826.1;Parent=gene-CCO57_RS19105;Dbxref=GenBank:WP_000809826.1;Name=WP_000809826.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=CCO57_RS19105;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809826.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 76335 76988 . + . ID=gene-CCO57_RS19110;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=CCO57_RS19110;old_locus_tag=CCO57_19090 NZ_NPMC01000013.1 Protein Homology CDS 76335 76988 . + 0 ID=cds-WP_000719810.1;Parent=gene-CCO57_RS19110;Dbxref=GenBank:WP_000719810.1;Name=WP_000719810.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=CCO57_RS19110;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719810.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 76985 77713 . + . ID=gene-CCO57_RS19115;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=CCO57_RS19115;old_locus_tag=CCO57_19095 NZ_NPMC01000013.1 Protein Homology CDS 76985 77713 . + 0 ID=cds-WP_061383777.1;Parent=gene-CCO57_RS19115;Dbxref=GenBank:WP_061383777.1;Name=WP_061383777.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=CCO57_RS19115;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_061383777.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 77788 78420 . - . ID=gene-CCO57_RS19120;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=CCO57_RS19120;old_locus_tag=CCO57_19100 NZ_NPMC01000013.1 Protein Homology CDS 77788 78420 . - 0 ID=cds-WP_094915085.1;Parent=gene-CCO57_RS19120;Dbxref=GenBank:WP_094915085.1;Name=WP_094915085.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=CCO57_RS19120;product=PhoP regulatory network protein YrbL;protein_id=WP_094915085.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 78670 78942 . - . ID=gene-CCO57_RS19130;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=CCO57_RS19130;old_locus_tag=CCO57_19110 NZ_NPMC01000013.1 Protein Homology CDS 78670 78942 . - 0 ID=cds-WP_000216797.1;Parent=gene-CCO57_RS19130;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=CCO57_RS19130;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 78939 79793 . - . ID=gene-CCO57_RS19135;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CCO57_RS19135;old_locus_tag=CCO57_19115 NZ_NPMC01000013.1 Protein Homology CDS 78939 79793 . - 0 ID=cds-WP_000243749.1;Parent=gene-CCO57_RS19135;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=CCO57_RS19135;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 79839 80330 . - . ID=gene-CCO57_RS19140;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=CCO57_RS19140;old_locus_tag=CCO57_19120 NZ_NPMC01000013.1 Protein Homology CDS 79839 80330 . - 0 ID=cds-WP_000609332.1;Parent=gene-CCO57_RS19140;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=CCO57_RS19140;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 80448 80735 . - . ID=gene-CCO57_RS19145;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CCO57_RS19145;old_locus_tag=CCO57_19125 NZ_NPMC01000013.1 Protein Homology CDS 80448 80735 . - 0 ID=cds-WP_001176589.1;Parent=gene-CCO57_RS19145;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=CCO57_RS19145;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 80758 82191 . - . ID=gene-CCO57_RS19150;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CCO57_RS19150;old_locus_tag=CCO57_19130 NZ_NPMC01000013.1 Protein Homology CDS 80758 82191 . - 0 ID=cds-WP_000809020.1;Parent=gene-CCO57_RS19150;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=CCO57_RS19150;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 82239 82964 . - . ID=gene-CCO57_RS19155;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CCO57_RS19155;old_locus_tag=CCO57_19135 NZ_NPMC01000013.1 Protein Homology CDS 82239 82964 . - 0 ID=cds-WP_000224104.1;Parent=gene-CCO57_RS19155;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=CCO57_RS19155;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 82971 83525 . - . ID=gene-CCO57_RS19160;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=CCO57_RS19160;old_locus_tag=CCO57_19140 NZ_NPMC01000013.1 Protein Homology CDS 82971 83525 . - 0 ID=cds-WP_000669770.1;Parent=gene-CCO57_RS19160;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=CCO57_RS19160;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 83494 84069 . - . ID=gene-CCO57_RS19165;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CCO57_RS19165;old_locus_tag=CCO57_19145 NZ_NPMC01000013.1 Protein Homology CDS 83494 84069 . - 0 ID=cds-WP_000047845.1;Parent=gene-CCO57_RS19165;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=CCO57_RS19165;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 84066 84632 . - . ID=gene-CCO57_RS19170;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=CCO57_RS19170;old_locus_tag=CCO57_19150 NZ_NPMC01000013.1 Protein Homology CDS 84066 84632 . - 0 ID=cds-WP_000030029.1;Parent=gene-CCO57_RS19170;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=CCO57_RS19170;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 84653 85639 . - . ID=gene-CCO57_RS19175;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=CCO57_RS19175;old_locus_tag=CCO57_19155 NZ_NPMC01000013.1 Protein Homology CDS 84653 85639 . - 0 ID=cds-WP_000018617.1;Parent=gene-CCO57_RS19175;Dbxref=GenBank:WP_000018617.1;Name=WP_000018617.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=CCO57_RS19175;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018617.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 85653 86630 . - . ID=gene-CCO57_RS19180;Name=CCO57_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19180;old_locus_tag=CCO57_19160 NZ_NPMC01000013.1 Protein Homology CDS 85653 86630 . - 0 ID=cds-WP_000922742.1;Parent=gene-CCO57_RS19180;Dbxref=GenBank:WP_000922742.1;Name=WP_000922742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=CCO57_RS19180;product=calcium/sodium antiporter;protein_id=WP_000922742.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 86843 87655 . + . ID=gene-CCO57_RS19185;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=CCO57_RS19185;old_locus_tag=CCO57_19165 NZ_NPMC01000013.1 Protein Homology CDS 86843 87655 . + 0 ID=cds-WP_000531566.1;Parent=gene-CCO57_RS19185;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=CCO57_RS19185;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 87663 88445 . + . ID=gene-CCO57_RS19190;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=CCO57_RS19190;old_locus_tag=CCO57_19170 NZ_NPMC01000013.1 Protein Homology CDS 87663 88445 . + 0 ID=cds-WP_000925786.1;Parent=gene-CCO57_RS19190;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=CCO57_RS19190;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 88450 89001 . + . ID=gene-CCO57_RS19195;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=CCO57_RS19195;old_locus_tag=CCO57_19175 NZ_NPMC01000013.1 Protein Homology CDS 88450 89001 . + 0 ID=cds-WP_001193591.1;Parent=gene-CCO57_RS19195;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=CCO57_RS19195;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 89020 89655 . + . ID=gene-CCO57_RS19200;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=CCO57_RS19200;old_locus_tag=CCO57_19180 NZ_NPMC01000013.1 Protein Homology CDS 89020 89655 . + 0 ID=cds-WP_000476475.1;Parent=gene-CCO57_RS19200;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=CCO57_RS19200;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 89655 89951 . + . ID=gene-CCO57_RS19205;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=CCO57_RS19205;old_locus_tag=CCO57_19185 NZ_NPMC01000013.1 Protein Homology CDS 89655 89951 . + 0 ID=cds-WP_000188843.1;Parent=gene-CCO57_RS19205;Dbxref=GenBank:WP_000188843.1;Name=WP_000188843.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=CCO57_RS19205;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188843.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 90139 90393 . + . ID=gene-CCO57_RS19210;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=CCO57_RS19210;old_locus_tag=CCO57_19190 NZ_NPMC01000013.1 Protein Homology CDS 90139 90393 . + 0 ID=cds-WP_001518349.1;Parent=gene-CCO57_RS19210;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=CCO57_RS19210;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 90447 91706 . + . ID=gene-CCO57_RS19215;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CCO57_RS19215;old_locus_tag=CCO57_19195 NZ_NPMC01000013.1 Protein Homology CDS 90447 91706 . + 0 ID=cds-WP_000357289.1;Parent=gene-CCO57_RS19215;Dbxref=GenBank:WP_000357289.1;Name=WP_000357289.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=CCO57_RS19215;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357289.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 91764 92051 . - . ID=gene-CCO57_RS19220;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=CCO57_RS19220;old_locus_tag=CCO57_19200 NZ_NPMC01000013.1 Protein Homology CDS 91764 92051 . - 0 ID=cds-WP_000444168.1;Parent=gene-CCO57_RS19220;Dbxref=GenBank:WP_000444168.1;Name=WP_000444168.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=CCO57_RS19220;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444168.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 92283 93254 . - . ID=gene-CCO57_RS19225;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=CCO57_RS19225;old_locus_tag=CCO57_19205 NZ_NPMC01000013.1 Protein Homology CDS 92283 93254 . - 0 ID=cds-WP_001047354.1;Parent=gene-CCO57_RS19225;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=CCO57_RS19225;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 93512 93823 . + . ID=gene-CCO57_RS19230;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CCO57_RS19230;old_locus_tag=CCO57_19210 NZ_NPMC01000013.1 Protein Homology CDS 93512 93823 . + 0 ID=cds-WP_000271398.1;Parent=gene-CCO57_RS19230;Dbxref=GenBank:WP_000271398.1;Name=WP_000271398.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=CCO57_RS19230;product=50S ribosomal protein L21;protein_id=WP_000271398.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 93843 94100 . + . ID=gene-CCO57_RS19235;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CCO57_RS19235;old_locus_tag=CCO57_19215 NZ_NPMC01000013.1 Protein Homology CDS 93843 94100 . + 0 ID=cds-WP_000940593.1;Parent=gene-CCO57_RS19235;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=CCO57_RS19235;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 94230 95195 . + . ID=gene-CCO57_RS19240;Name=CCO57_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19240;old_locus_tag=CCO57_19220 NZ_NPMC01000013.1 Protein Homology CDS 94230 95195 . + 0 ID=cds-WP_079821906.1;Parent=gene-CCO57_RS19240;Dbxref=GenBank:WP_079821906.1;Name=WP_079821906.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=CCO57_RS19240;product=DMT family transporter;protein_id=WP_079821906.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 95211 96383 . + . ID=gene-CCO57_RS19245;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=CCO57_RS19245;old_locus_tag=CCO57_19225 NZ_NPMC01000013.1 Protein Homology CDS 95211 96383 . + 0 ID=cds-WP_000673556.1;Parent=gene-CCO57_RS19245;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=CCO57_RS19245;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 96514 97947 . - . ID=gene-CCO57_RS19250;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CCO57_RS19250;old_locus_tag=CCO57_19230 NZ_NPMC01000013.1 Protein Homology CDS 96514 97947 . - 0 ID=cds-WP_094915086.1;Parent=gene-CCO57_RS19250;Dbxref=GenBank:WP_094915086.1;Name=WP_094915086.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=CCO57_RS19250;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_094915086.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 98195 98671 . + . ID=gene-CCO57_RS19255;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CCO57_RS19255;old_locus_tag=CCO57_19235 NZ_NPMC01000013.1 Protein Homology CDS 98195 98671 . + 0 ID=cds-WP_023212282.1;Parent=gene-CCO57_RS19255;Dbxref=GenBank:WP_023212282.1;Name=WP_023212282.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=CCO57_RS19255;product=transcription elongation factor GreA;protein_id=WP_023212282.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 98827 99120 . - . ID=gene-CCO57_RS19260;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CCO57_RS19260;old_locus_tag=CCO57_19240 NZ_NPMC01000013.1 Protein Homology CDS 98827 99120 . - 0 ID=cds-WP_001592995.1;Parent=gene-CCO57_RS19260;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=CCO57_RS19260;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 99247 99873 . + . ID=gene-CCO57_RS19265;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=CCO57_RS19265;old_locus_tag=CCO57_19245 NZ_NPMC01000013.1 Protein Homology CDS 99247 99873 . + 0 ID=cds-WP_000145974.1;Parent=gene-CCO57_RS19265;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=CCO57_RS19265;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 99977 101911 . + . ID=gene-CCO57_RS19275;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=CCO57_RS19275;old_locus_tag=CCO57_19255 NZ_NPMC01000013.1 Protein Homology CDS 99977 101911 . + 0 ID=cds-WP_001107481.1;Parent=gene-CCO57_RS19275;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=CCO57_RS19275;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 102015 102863 . + . ID=gene-CCO57_RS19280;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CCO57_RS19280;old_locus_tag=CCO57_19260 NZ_NPMC01000013.1 Protein Homology CDS 102015 102863 . + 0 ID=cds-WP_000764711.1;Parent=gene-CCO57_RS19280;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=CCO57_RS19280;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 102856 104193 . + . ID=gene-CCO57_RS19285;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CCO57_RS19285;old_locus_tag=CCO57_19265 NZ_NPMC01000013.1 Protein Homology CDS 102856 104193 . + 0 ID=cds-WP_000071171.1;Parent=gene-CCO57_RS19285;Dbxref=GenBank:WP_000071171.1;Name=WP_000071171.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=CCO57_RS19285;product=phosphoglucosamine mutase;protein_id=WP_000071171.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 104416 104748 . + . ID=gene-CCO57_RS19290;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CCO57_RS19290;old_locus_tag=CCO57_19270 NZ_NPMC01000013.1 Protein Homology CDS 104416 104748 . + 0 ID=cds-WP_000272680.1;Parent=gene-CCO57_RS19290;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=CCO57_RS19290;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_NPMC01000013.1 RefSeq gene 104762 104848 . + . ID=gene-CCO57_RS19295;Name=CCO57_RS19295;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS19295;old_locus_tag=CCO57_19275 NZ_NPMC01000013.1 tRNAscan-SE tRNA 104762 104848 . + . ID=rna-CCO57_RS19295;Parent=gene-CCO57_RS19295;anticodon=(pos:104796..104798);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19295;product=tRNA-Leu NZ_NPMC01000013.1 tRNAscan-SE exon 104762 104848 . + . ID=exon-CCO57_RS19295-1;Parent=rna-CCO57_RS19295;anticodon=(pos:104796..104798);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19295;product=tRNA-Leu ##sequence-region NZ_NPMC01000014.1 1 88149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000014.1 RefSeq region 1 88149 . + . ID=NZ_NPMC01000014.1:1..88149;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000014.1 RefSeq gene 157 702 . - . ID=gene-CCO57_RS19300;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=CCO57_RS19300;old_locus_tag=CCO57_19280 NZ_NPMC01000014.1 Protein Homology CDS 157 702 . - 0 ID=cds-WP_000853983.1;Parent=gene-CCO57_RS19300;Dbxref=GenBank:WP_000853983.1;Name=WP_000853983.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=CCO57_RS19300;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853983.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 714 2165 . - . ID=gene-CCO57_RS19305;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=CCO57_RS19305;old_locus_tag=CCO57_19285 NZ_NPMC01000014.1 Protein Homology CDS 714 2165 . - 0 ID=cds-WP_000545688.1;Parent=gene-CCO57_RS19305;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=CCO57_RS19305;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 2204 2818 . - . ID=gene-CCO57_RS19310;Name=CCO57_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19310;old_locus_tag=CCO57_19290 NZ_NPMC01000014.1 Protein Homology CDS 2204 2818 . - 0 ID=cds-WP_000378897.1;Parent=gene-CCO57_RS19310;Dbxref=GenBank:WP_000378897.1;Name=WP_000378897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=CCO57_RS19310;product=IMPACT family protein;protein_id=WP_000378897.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 2818 4149 . - . ID=gene-CCO57_RS19315;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=CCO57_RS19315;old_locus_tag=CCO57_19295 NZ_NPMC01000014.1 Protein Homology CDS 2818 4149 . - 0 ID=cds-WP_023137093.1;Parent=gene-CCO57_RS19315;Dbxref=GenBank:WP_023137093.1;Name=WP_023137093.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=CCO57_RS19315;product=Xaa-Pro dipeptidase;protein_id=WP_023137093.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 4339 6528 . + . ID=gene-CCO57_RS19320;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CCO57_RS19320;old_locus_tag=CCO57_19300 NZ_NPMC01000014.1 Protein Homology CDS 4339 6528 . + 0 ID=cds-WP_000966016.1;Parent=gene-CCO57_RS19320;Dbxref=GenBank:WP_000966016.1;Name=WP_000966016.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=CCO57_RS19320;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000966016.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 6538 7701 . + . ID=gene-CCO57_RS19325;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=CCO57_RS19325;old_locus_tag=CCO57_19305 NZ_NPMC01000014.1 Protein Homology CDS 6538 7701 . + 0 ID=cds-WP_000438778.1;Parent=gene-CCO57_RS19325;Dbxref=GenBank:WP_000438778.1;Name=WP_000438778.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=CCO57_RS19325;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438778.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 7898 9721 . - . ID=gene-CCO57_RS19330;Name=CCO57_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19330;old_locus_tag=CCO57_19310 NZ_NPMC01000014.1 Protein Homology CDS 7898 9721 . - 0 ID=cds-WP_000669888.1;Parent=gene-CCO57_RS19330;Dbxref=GenBank:WP_000669888.1;Name=WP_000669888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=CCO57_RS19330;product=aryl-sulfate sulfotransferase;protein_id=WP_000669888.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 9971 10672 . - . ID=gene-CCO57_RS19335;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=CCO57_RS19335;old_locus_tag=CCO57_19315 NZ_NPMC01000014.1 Protein Homology CDS 9971 10672 . - 0 ID=cds-WP_000209832.1;Parent=gene-CCO57_RS19335;Dbxref=GenBank:WP_000209832.1;Name=WP_000209832.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=CCO57_RS19335;product=NAD(P)H-flavin reductase;protein_id=WP_000209832.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 10758 12236 . - . ID=gene-CCO57_RS19340;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=CCO57_RS19340;old_locus_tag=CCO57_19320 NZ_NPMC01000014.1 Protein Homology CDS 10758 12236 . - 0 ID=cds-WP_000339760.1;Parent=gene-CCO57_RS19340;Dbxref=GenBank:WP_000339760.1;Name=WP_000339760.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=CCO57_RS19340;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339760.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 12422 12910 . + . ID=gene-CCO57_RS19345;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=CCO57_RS19345;old_locus_tag=CCO57_19325 NZ_NPMC01000014.1 Protein Homology CDS 12422 12910 . + 0 ID=cds-WP_001192410.1;Parent=gene-CCO57_RS19345;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=CCO57_RS19345;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 12918 13700 . - . ID=gene-CCO57_RS19350;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=CCO57_RS19350;old_locus_tag=CCO57_19330 NZ_NPMC01000014.1 Protein Homology CDS 12918 13700 . - 0 ID=cds-WP_000459642.1;Parent=gene-CCO57_RS19350;Dbxref=GenBank:WP_000459642.1;Name=WP_000459642.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=CCO57_RS19350;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459642.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 13742 14521 . - . ID=gene-CCO57_RS19355;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=CCO57_RS19355;old_locus_tag=CCO57_19335 NZ_NPMC01000014.1 Protein Homology CDS 13742 14521 . - 0 ID=cds-WP_000257554.1;Parent=gene-CCO57_RS19355;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=CCO57_RS19355;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 14524 15072 . - . ID=gene-CCO57_RS19360;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=CCO57_RS19360;old_locus_tag=CCO57_19340 NZ_NPMC01000014.1 Protein Homology CDS 14524 15072 . - 0 ID=cds-WP_000459612.1;Parent=gene-CCO57_RS19360;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=CCO57_RS19360;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 15076 15330 . - . ID=gene-CCO57_RS19365;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=CCO57_RS19365;old_locus_tag=CCO57_19345 NZ_NPMC01000014.1 Protein Homology CDS 15076 15330 . - 0 ID=cds-WP_000508972.1;Parent=gene-CCO57_RS19365;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=CCO57_RS19365;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 15537 17177 . - . ID=gene-CCO57_RS19370;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=CCO57_RS19370;old_locus_tag=CCO57_19350 NZ_NPMC01000014.1 Protein Homology CDS 15537 17177 . - 0 ID=cds-WP_000187559.1;Parent=gene-CCO57_RS19370;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=CCO57_RS19370;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 17174 17779 . - . ID=gene-CCO57_RS19375;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=CCO57_RS19375;old_locus_tag=CCO57_19355 NZ_NPMC01000014.1 Protein Homology CDS 17174 17779 . - 0 ID=cds-WP_001116092.1;Parent=gene-CCO57_RS19375;Dbxref=GenBank:WP_001116092.1;Name=WP_001116092.1;Ontology_term=GO:0032150;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process from chorismate|0032150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=CCO57_RS19375;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116092.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 17789 18544 . - . ID=gene-CCO57_RS19380;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=CCO57_RS19380;old_locus_tag=CCO57_19360 NZ_NPMC01000014.1 Protein Homology CDS 17789 18544 . - 0 ID=cds-WP_000229009.1;Parent=gene-CCO57_RS19380;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=CCO57_RS19380;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 18640 20070 . - . ID=gene-CCO57_RS19385;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=CCO57_RS19385;old_locus_tag=CCO57_19365 NZ_NPMC01000014.1 Protein Homology CDS 18640 20070 . - 0 ID=cds-WP_000355562.1;Parent=gene-CCO57_RS19385;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=CCO57_RS19385;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 20210 20971 . - . ID=gene-CCO57_RS19390;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=CCO57_RS19390;old_locus_tag=CCO57_19370 NZ_NPMC01000014.1 Protein Homology CDS 20210 20971 . - 0 ID=cds-WP_000045169.1;Parent=gene-CCO57_RS19390;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=CCO57_RS19390;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 21230 22042 . + . ID=gene-CCO57_RS19395;Name=CCO57_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19395;old_locus_tag=CCO57_19375 NZ_NPMC01000014.1 Protein Homology CDS 21230 22042 . + 0 ID=cds-WP_000213959.1;Parent=gene-CCO57_RS19395;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=CCO57_RS19395;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 22122 23465 . - . ID=gene-CCO57_RS19400;Name=CCO57_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19400;old_locus_tag=CCO57_19380 NZ_NPMC01000014.1 Protein Homology CDS 22122 23465 . - 0 ID=cds-WP_094915087.1;Parent=gene-CCO57_RS19400;Dbxref=GenBank:WP_094915087.1;Name=WP_094915087.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=CCO57_RS19400;product=anaerobic sulfatase maturase;protein_id=WP_094915087.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 23800 26064 . - . ID=gene-CCO57_RS19405;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CCO57_RS19405;old_locus_tag=CCO57_19385 NZ_NPMC01000014.1 Protein Homology CDS 23800 26064 . - 0 ID=cds-WP_094915088.1;Parent=gene-CCO57_RS19405;Dbxref=GenBank:WP_094915088.1;Name=WP_094915088.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=CCO57_RS19405;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_094915088.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 26313 27266 . + . ID=gene-CCO57_RS19410;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=CCO57_RS19410;old_locus_tag=CCO57_19390 NZ_NPMC01000014.1 Protein Homology CDS 26313 27266 . + 0 ID=cds-WP_000569786.1;Parent=gene-CCO57_RS19410;Dbxref=GenBank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=CCO57_RS19410;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 27154 28053 . - . ID=gene-CCO57_RS19415;Name=CCO57_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19415;old_locus_tag=CCO57_19395 NZ_NPMC01000014.1 Protein Homology CDS 27154 28053 . - 0 ID=cds-WP_001196254.1;Parent=gene-CCO57_RS19415;Dbxref=GenBank:WP_001196254.1;Name=WP_001196254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=CCO57_RS19415;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196254.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 28134 28934 . - . ID=gene-CCO57_RS19420;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=CCO57_RS19420;old_locus_tag=CCO57_19400 NZ_NPMC01000014.1 Protein Homology CDS 28134 28934 . - 0 ID=cds-WP_023233069.1;Parent=gene-CCO57_RS19420;Dbxref=GenBank:WP_023233069.1;Name=WP_023233069.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=CCO57_RS19420;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_023233069.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 28950 29966 . - . ID=gene-CCO57_RS19425;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=CCO57_RS19425;old_locus_tag=CCO57_19405 NZ_NPMC01000014.1 Protein Homology CDS 28950 29966 . - 0 ID=cds-WP_094915089.1;Parent=gene-CCO57_RS19425;Dbxref=GenBank:WP_094915089.1;Name=WP_094915089.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=CCO57_RS19425;product=lysophospholipase L2;protein_id=WP_094915089.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 30077 30697 . + . ID=gene-CCO57_RS19430;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=CCO57_RS19430;old_locus_tag=CCO57_19410 NZ_NPMC01000014.1 Protein Homology CDS 30077 30697 . + 0 ID=cds-WP_000142520.1;Parent=gene-CCO57_RS19430;Dbxref=GenBank:WP_000142520.1;Name=WP_000142520.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=CCO57_RS19430;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142520.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 30737 31357 . - . ID=gene-CCO57_RS19435;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=CCO57_RS19435;old_locus_tag=CCO57_19415 NZ_NPMC01000014.1 Protein Homology CDS 30737 31357 . - 0 ID=cds-WP_000980080.1;Parent=gene-CCO57_RS19435;Dbxref=GenBank:WP_000980080.1;Name=WP_000980080.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=CCO57_RS19435;product=threonine export protein RhtC;protein_id=WP_000980080.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 31421 33250 . - . ID=gene-CCO57_RS19440;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CCO57_RS19440;old_locus_tag=CCO57_19420 NZ_NPMC01000014.1 Protein Homology CDS 31421 33250 . - 0 ID=cds-WP_001533487.1;Parent=gene-CCO57_RS19440;Dbxref=GenBank:WP_001533487.1;Name=WP_001533487.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=CCO57_RS19440;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001533487.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 33334 34203 . - . ID=gene-CCO57_RS19445;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=CCO57_RS19445;old_locus_tag=CCO57_19425 NZ_NPMC01000014.1 Protein Homology CDS 33334 34203 . - 0 ID=cds-WP_001201692.1;Parent=gene-CCO57_RS19445;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=CCO57_RS19445;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 34368 34835 . + . ID=gene-CCO57_RS19450;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=CCO57_RS19450;old_locus_tag=CCO57_19430 NZ_NPMC01000014.1 Protein Homology CDS 34368 34835 . + 0 ID=cds-WP_001277136.1;Parent=gene-CCO57_RS19450;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=CCO57_RS19450;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 34879 35775 . + . ID=gene-CCO57_RS19455;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO57_RS19455;old_locus_tag=CCO57_19435 NZ_NPMC01000014.1 Protein Homology CDS 34879 35775 . + 0 ID=cds-WP_000339083.1;Parent=gene-CCO57_RS19455;Dbxref=GenBank:WP_000339083.1;Name=WP_000339083.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339083.1;locus_tag=CCO57_RS19455;product=EamA family transporter RarD;protein_id=WP_000339083.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 35850 36800 . - . ID=gene-CCO57_RS19460;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CCO57_RS19460;old_locus_tag=CCO57_19440 NZ_NPMC01000014.1 Protein Homology CDS 35850 36800 . - 0 ID=cds-WP_000947139.1;Parent=gene-CCO57_RS19460;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=CCO57_RS19460;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 36956 37012 . - . ID=gene-CCO57_RS24685;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=CCO57_RS24685 NZ_NPMC01000014.1 Protein Homology CDS 36956 37012 . - 0 ID=cds-WP_213083418.1;Parent=gene-CCO57_RS24685;Dbxref=GenBank:WP_213083418.1;Name=WP_213083418.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=CCO57_RS24685;product=YsgD/CorL family protein;protein_id=WP_213083418.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 37272 39434 . - . ID=gene-CCO57_RS19470;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=CCO57_RS19470;old_locus_tag=CCO57_19450 NZ_NPMC01000014.1 Protein Homology CDS 37272 39434 . - 0 ID=cds-WP_000383436.1;Parent=gene-CCO57_RS19470;Dbxref=GenBank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=CCO57_RS19470;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 39570 40286 . - . ID=gene-CCO57_RS19475;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=CCO57_RS19475;old_locus_tag=CCO57_19455 NZ_NPMC01000014.1 Protein Homology CDS 39570 40286 . - 0 ID=cds-WP_001213560.1;Parent=gene-CCO57_RS19475;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=CCO57_RS19475;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 40286 41188 . - . ID=gene-CCO57_RS19480;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CCO57_RS19480;old_locus_tag=CCO57_19460 NZ_NPMC01000014.1 Protein Homology CDS 40286 41188 . - 0 ID=cds-WP_000132874.1;Parent=gene-CCO57_RS19480;Dbxref=GenBank:WP_000132874.1;Name=WP_000132874.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=CCO57_RS19480;product=tyrosine recombinase XerC;protein_id=WP_000132874.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 41185 41892 . - . ID=gene-CCO57_RS19485;Name=CCO57_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19485;old_locus_tag=CCO57_19465 NZ_NPMC01000014.1 Protein Homology CDS 41185 41892 . - 0 ID=cds-WP_094915090.1;Parent=gene-CCO57_RS19485;Dbxref=GenBank:WP_094915090.1;Name=WP_094915090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=CCO57_RS19485;product=DUF484 domain-containing protein;protein_id=WP_094915090.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 41889 42713 . - . ID=gene-CCO57_RS19490;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=CCO57_RS19490;old_locus_tag=CCO57_19470 NZ_NPMC01000014.1 Protein Homology CDS 41889 42713 . - 0 ID=cds-WP_001160671.1;Parent=gene-CCO57_RS19490;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=CCO57_RS19490;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 42750 42953 . - . ID=gene-CCO57_RS19495;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=CCO57_RS19495;old_locus_tag=CCO57_19475 NZ_NPMC01000014.1 Protein Homology CDS 42750 42953 . - 0 ID=cds-WP_000799903.1;Parent=gene-CCO57_RS19495;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=CCO57_RS19495;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 43092 43412 . + . ID=gene-CCO57_RS19500;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=CCO57_RS19500;old_locus_tag=CCO57_19480 NZ_NPMC01000014.1 Protein Homology CDS 43092 43412 . + 0 ID=cds-WP_094915091.1;Parent=gene-CCO57_RS19500;Dbxref=GenBank:WP_094915091.1;Name=WP_094915091.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=CCO57_RS19500;product=iron donor protein CyaY;protein_id=WP_094915091.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 43490 46036 . - . ID=gene-CCO57_RS19505;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=CCO57_RS19505;old_locus_tag=CCO57_19485 NZ_NPMC01000014.1 Protein Homology CDS 43490 46036 . - 0 ID=cds-WP_000281719.1;Parent=gene-CCO57_RS19505;Dbxref=GenBank:WP_000281719.1;Name=WP_000281719.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=CCO57_RS19505;product=class I adenylate cyclase;protein_id=WP_000281719.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 46413 47354 . + . ID=gene-CCO57_RS19510;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CCO57_RS19510;old_locus_tag=CCO57_19490 NZ_NPMC01000014.1 Protein Homology CDS 46413 47354 . + 0 ID=cds-WP_094915092.1;Parent=gene-CCO57_RS19510;Dbxref=GenBank:WP_094915092.1;Name=WP_094915092.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=CCO57_RS19510;product=hydroxymethylbilane synthase;protein_id=WP_094915092.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 47351 48091 . + . ID=gene-CCO57_RS19515;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=CCO57_RS19515;old_locus_tag=CCO57_19495 NZ_NPMC01000014.1 Protein Homology CDS 47351 48091 . + 0 ID=cds-WP_000025494.1;Parent=gene-CCO57_RS19515;Dbxref=GenBank:WP_000025494.1;Name=WP_000025494.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=CCO57_RS19515;product=uroporphyrinogen-III synthase;protein_id=WP_000025494.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 48113 49282 . + . ID=gene-CCO57_RS19520;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=CCO57_RS19520;old_locus_tag=CCO57_19500 NZ_NPMC01000014.1 Protein Homology CDS 48113 49282 . + 0 ID=cds-WP_000138960.1;Parent=gene-CCO57_RS19520;Dbxref=GenBank:WP_000138960.1;Name=WP_000138960.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=CCO57_RS19520;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138960.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 49285 50481 . + . ID=gene-CCO57_RS19525;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CCO57_RS19525;old_locus_tag=CCO57_19505 NZ_NPMC01000014.1 Protein Homology CDS 49285 50481 . + 0 ID=cds-WP_094915093.1;Parent=gene-CCO57_RS19525;Dbxref=GenBank:WP_094915093.1;Name=WP_094915093.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=CCO57_RS19525;product=protoheme IX biogenesis protein HemY;protein_id=WP_094915093.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 51063 51139 . - . ID=gene-CCO57_RS19530;Name=CCO57_RS19530;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS19530;old_locus_tag=CCO57_19510 NZ_NPMC01000014.1 tRNAscan-SE tRNA 51063 51139 . - . ID=rna-CCO57_RS19530;Parent=gene-CCO57_RS19530;anticodon=(pos:complement(51103..51105));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19530;product=tRNA-Pro NZ_NPMC01000014.1 tRNAscan-SE exon 51063 51139 . - . ID=exon-CCO57_RS19530-1;Parent=rna-CCO57_RS19530;anticodon=(pos:complement(51103..51105));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19530;product=tRNA-Pro NZ_NPMC01000014.1 RefSeq gene 51182 51268 . - . ID=gene-CCO57_RS19535;Name=CCO57_RS19535;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS19535;old_locus_tag=CCO57_19515 NZ_NPMC01000014.1 tRNAscan-SE tRNA 51182 51268 . - . ID=rna-CCO57_RS19535;Parent=gene-CCO57_RS19535;anticodon=(pos:complement(51232..51234));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19535;product=tRNA-Leu NZ_NPMC01000014.1 tRNAscan-SE exon 51182 51268 . - . ID=exon-CCO57_RS19535-1;Parent=rna-CCO57_RS19535;anticodon=(pos:complement(51232..51234));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19535;product=tRNA-Leu NZ_NPMC01000014.1 RefSeq gene 51289 51364 . - . ID=gene-CCO57_RS19540;Name=CCO57_RS19540;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS19540;old_locus_tag=CCO57_19520 NZ_NPMC01000014.1 tRNAscan-SE tRNA 51289 51364 . - . ID=rna-CCO57_RS19540;Parent=gene-CCO57_RS19540;anticodon=(pos:complement(51329..51331));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19540;product=tRNA-His NZ_NPMC01000014.1 tRNAscan-SE exon 51289 51364 . - . ID=exon-CCO57_RS19540-1;Parent=rna-CCO57_RS19540;anticodon=(pos:complement(51329..51331));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19540;product=tRNA-His NZ_NPMC01000014.1 RefSeq gene 51419 51495 . - . ID=gene-CCO57_RS19545;Name=CCO57_RS19545;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS19545;old_locus_tag=CCO57_19525 NZ_NPMC01000014.1 tRNAscan-SE tRNA 51419 51495 . - . ID=rna-CCO57_RS19545;Parent=gene-CCO57_RS19545;anticodon=(pos:complement(51459..51461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19545;product=tRNA-Arg NZ_NPMC01000014.1 tRNAscan-SE exon 51419 51495 . - . ID=exon-CCO57_RS19545-1;Parent=rna-CCO57_RS19545;anticodon=(pos:complement(51459..51461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19545;product=tRNA-Arg NZ_NPMC01000014.1 RefSeq gene 51598 52983 . - . ID=gene-CCO57_RS19550;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=CCO57_RS19550;old_locus_tag=CCO57_19530 NZ_NPMC01000014.1 Protein Homology CDS 51598 52983 . - 0 ID=cds-WP_000818378.1;Parent=gene-CCO57_RS19550;Dbxref=GenBank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=CCO57_RS19550;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818378.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 53190 53930 . - . ID=gene-CCO57_RS19555;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=CCO57_RS19555;old_locus_tag=CCO57_19535 NZ_NPMC01000014.1 Protein Homology CDS 53190 53930 . - 0 ID=cds-WP_000183617.1;Parent=gene-CCO57_RS19555;Dbxref=GenBank:WP_000183617.1;Name=WP_000183617.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=CCO57_RS19555;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183617.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 53927 55285 . - . ID=gene-CCO57_RS19560;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=CCO57_RS19560;old_locus_tag=CCO57_19540 NZ_NPMC01000014.1 Protein Homology CDS 53927 55285 . - 0 ID=cds-WP_000055605.1;Parent=gene-CCO57_RS19560;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=CCO57_RS19560;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 55282 56361 . - . ID=gene-CCO57_RS19565;Name=CCO57_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19565;old_locus_tag=CCO57_19545 NZ_NPMC01000014.1 Protein Homology CDS 55282 56361 . - 0 ID=cds-WP_000217187.1;Parent=gene-CCO57_RS19565;Dbxref=GenBank:WP_000217187.1;Name=WP_000217187.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=CCO57_RS19565;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217187.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 56358 57608 . - . ID=gene-CCO57_RS19570;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=CCO57_RS19570;old_locus_tag=CCO57_19550 NZ_NPMC01000014.1 Protein Homology CDS 56358 57608 . - 0 ID=cds-WP_000050297.1;Parent=gene-CCO57_RS19570;Dbxref=GenBank:WP_000050297.1;Name=WP_000050297.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=CCO57_RS19570;product=lipid III flippase WzxE;protein_id=WP_000050297.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 57610 58740 . - . ID=gene-CCO57_RS19575;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=CCO57_RS19575;old_locus_tag=CCO57_19555 NZ_NPMC01000014.1 Protein Homology CDS 57610 58740 . - 0 ID=cds-WP_000612080.1;Parent=gene-CCO57_RS19575;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=CCO57_RS19575;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 58745 59422 . - . ID=gene-CCO57_RS19580;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=CCO57_RS19580;old_locus_tag=CCO57_19560 NZ_NPMC01000014.1 Protein Homology CDS 58745 59422 . - 0 ID=cds-WP_023213947.1;Parent=gene-CCO57_RS19580;Dbxref=GenBank:WP_023213947.1;Name=WP_023213947.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=CCO57_RS19580;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_023213947.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 59400 60281 . - . ID=gene-CCO57_RS19585;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CCO57_RS19585;old_locus_tag=CCO57_19565 NZ_NPMC01000014.1 Protein Homology CDS 59400 60281 . - 0 ID=cds-WP_094915094.1;Parent=gene-CCO57_RS19585;Dbxref=GenBank:WP_094915094.1;Name=WP_094915094.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=CCO57_RS19585;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_094915094.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 60314 61381 . - . ID=gene-CCO57_RS19590;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=CCO57_RS19590;old_locus_tag=CCO57_19570 NZ_NPMC01000014.1 Protein Homology CDS 60314 61381 . - 0 ID=cds-WP_086776845.1;Parent=gene-CCO57_RS19590;Dbxref=GenBank:WP_086776845.1;Name=WP_086776845.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=CCO57_RS19590;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_086776845.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 61381 62643 . - . ID=gene-CCO57_RS19595;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=CCO57_RS19595;old_locus_tag=CCO57_19575 NZ_NPMC01000014.1 Protein Homology CDS 61381 62643 . - 0 ID=cds-WP_086776846.1;Parent=gene-CCO57_RS19595;Dbxref=GenBank:WP_086776846.1;Name=WP_086776846.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=CCO57_RS19595;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_086776846.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 62640 63770 . - . ID=gene-CCO57_RS19600;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CCO57_RS19600;old_locus_tag=CCO57_19580 NZ_NPMC01000014.1 Protein Homology CDS 62640 63770 . - 0 ID=cds-WP_094915095.1;Parent=gene-CCO57_RS19600;Dbxref=GenBank:WP_094915095.1;Name=WP_094915095.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=CCO57_RS19600;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_094915095.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 63826 64872 . - . ID=gene-CCO57_RS19605;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=CCO57_RS19605;old_locus_tag=CCO57_19585 NZ_NPMC01000014.1 Protein Homology CDS 63826 64872 . - 0 ID=cds-WP_000193413.1;Parent=gene-CCO57_RS19605;Dbxref=GenBank:WP_000193413.1;Name=WP_000193413.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=CCO57_RS19605;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193413.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 64884 65987 . - . ID=gene-CCO57_RS19610;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=CCO57_RS19610;old_locus_tag=CCO57_19590 NZ_NPMC01000014.1 Protein Homology CDS 64884 65987 . - 0 ID=cds-WP_001050948.1;Parent=gene-CCO57_RS19610;Dbxref=GenBank:WP_001050948.1;Name=WP_001050948.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=CCO57_RS19610;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050948.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 66227 67486 . - . ID=gene-CCO57_RS19620;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CCO57_RS19620;old_locus_tag=CCO57_19600 NZ_NPMC01000014.1 Protein Homology CDS 66227 67486 . - 0 ID=cds-WP_001054532.1;Parent=gene-CCO57_RS19620;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=CCO57_RS19620;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 67574 67657 . - . ID=gene-CCO57_RS24690;Name=CCO57_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24690 NZ_NPMC01000014.1 Protein Homology CDS 67574 67657 . - 0 ID=cds-WP_134820045.1;Parent=gene-CCO57_RS24690;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=CCO57_RS24690;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 67905 68234 . - . ID=gene-CCO57_RS19625;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CCO57_RS19625;old_locus_tag=CCO57_19605 NZ_NPMC01000014.1 Protein Homology CDS 67905 68234 . - 0 ID=cds-WP_001280776.1;Parent=gene-CCO57_RS19625;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=CCO57_RS19625;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 68378 69643 . + . ID=gene-CCO57_RS19630;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=CCO57_RS19630;old_locus_tag=CCO57_19610 NZ_NPMC01000014.1 Protein Homology CDS 68378 69643 . + 0 ID=cds-WP_000047525.1;Parent=gene-CCO57_RS19630;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=CCO57_RS19630;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 69762 71243 . + . ID=gene-CCO57_RS19635;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=CCO57_RS19635;old_locus_tag=CCO57_19615 NZ_NPMC01000014.1 Protein Homology CDS 69762 71243 . + 0 ID=cds-WP_001089453.1;Parent=gene-CCO57_RS19635;Dbxref=GenBank:WP_001089453.1;Name=WP_001089453.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=CCO57_RS19635;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089453.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 71283 73307 . - . ID=gene-CCO57_RS19640;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=CCO57_RS19640;old_locus_tag=CCO57_19620 NZ_NPMC01000014.1 Protein Homology CDS 71283 73307 . - 0 ID=cds-WP_001238842.1;Parent=gene-CCO57_RS19640;Dbxref=GenBank:WP_001238842.1;Name=WP_001238842.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=CCO57_RS19640;product=DNA helicase Rep;protein_id=WP_001238842.1;transl_table=11 NZ_NPMC01000014.1 RefSeq pseudogene 73407 73531 . - . ID=gene-CCO57_RS24695;Name=CCO57_RS24695;end_range=73531,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24695;old_locus_tag=CCO57_19625;partial=true;pseudo=true NZ_NPMC01000014.1 Protein Homology CDS 73407 73531 . - 0 ID=cds-CCO57_RS24695;Parent=gene-CCO57_RS24695;Note=involved in nicotinamide riboside transport%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=73531,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=CCO57_RS24695;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 NZ_NPMC01000014.1 RefSeq pseudogene 73483 73638 . - . ID=gene-CCO57_RS24850;Name=CCO57_RS24850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24850;partial=true;pseudo=true;start_range=.,73483 NZ_NPMC01000014.1 Protein Homology CDS 73483 73638 . - 0 ID=cds-CCO57_RS24850;Parent=gene-CCO57_RS24850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=CCO57_RS24850;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;start_range=.,73483;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 73832 74113 . + . ID=gene-CCO57_RS19655;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=CCO57_RS19655;old_locus_tag=CCO57_19635 NZ_NPMC01000014.1 Protein Homology CDS 73832 74113 . + 0 ID=cds-WP_001096806.1;Parent=gene-CCO57_RS19655;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=CCO57_RS19655;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 74205 75680 . - . ID=gene-CCO57_RS19660;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CCO57_RS19660;old_locus_tag=CCO57_19640 NZ_NPMC01000014.1 Protein Homology CDS 74205 75680 . - 0 ID=cds-WP_094915096.1;Parent=gene-CCO57_RS19660;Dbxref=GenBank:WP_094915096.1;Name=WP_094915096.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=CCO57_RS19660;product=ketol-acid reductoisomerase;protein_id=WP_094915096.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 75845 76732 . + . ID=gene-CCO57_RS19665;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=CCO57_RS19665;old_locus_tag=CCO57_19645 NZ_NPMC01000014.1 Protein Homology CDS 75845 76732 . + 0 ID=cds-WP_023137859.1;Parent=gene-CCO57_RS19665;Dbxref=GenBank:WP_023137859.1;Name=WP_023137859.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=CCO57_RS19665;product=HTH-type transcriptional activator IlvY;protein_id=WP_023137859.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 76735 77076 . - . ID=gene-CCO57_RS19670;Name=CCO57_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19670;old_locus_tag=CCO57_19650 NZ_NPMC01000014.1 Protein Homology CDS 76735 77076 . - 0 ID=cds-WP_094915097.1;Parent=gene-CCO57_RS19670;Dbxref=GenBank:WP_094915097.1;Name=WP_094915097.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=CCO57_RS19670;product=helix-turn-helix domain-containing protein;protein_id=WP_094915097.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 77073 77390 . - . ID=gene-CCO57_RS19675;Name=CCO57_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19675;old_locus_tag=CCO57_19655 NZ_NPMC01000014.1 Protein Homology CDS 77073 77390 . - 0 ID=cds-WP_079975081.1;Parent=gene-CCO57_RS19675;Dbxref=GenBank:WP_079975081.1;Name=WP_079975081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=CCO57_RS19675;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_079975081.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 77673 79217 . - . ID=gene-CCO57_RS19680;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CCO57_RS19680;old_locus_tag=CCO57_19660 NZ_NPMC01000014.1 Protein Homology CDS 77673 79217 . - 0 ID=cds-WP_094915098.1;Parent=gene-CCO57_RS19680;Dbxref=GenBank:WP_094915098.1;Name=WP_094915098.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=CCO57_RS19680;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_094915098.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 79220 81070 . - . ID=gene-CCO57_RS19685;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO57_RS19685;old_locus_tag=CCO57_19665 NZ_NPMC01000014.1 Protein Homology CDS 79220 81070 . - 0 ID=cds-WP_001127442.1;Parent=gene-CCO57_RS19685;Dbxref=GenBank:WP_001127442.1;Name=WP_001127442.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=CCO57_RS19685;product=dihydroxy-acid dehydratase;protein_id=WP_001127442.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 81231 82160 . - . ID=gene-CCO57_RS19690;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=CCO57_RS19690;old_locus_tag=CCO57_19670 NZ_NPMC01000014.1 Protein Homology CDS 81231 82160 . - 0 ID=cds-WP_000208528.1;Parent=gene-CCO57_RS19690;Dbxref=GenBank:WP_000208528.1;Name=WP_000208528.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=CCO57_RS19690;product=branched-chain-amino-acid transaminase;protein_id=WP_000208528.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 82178 82441 . - . ID=gene-CCO57_RS19695;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=CCO57_RS19695;old_locus_tag=CCO57_19675 NZ_NPMC01000014.1 Protein Homology CDS 82178 82441 . - 0 ID=cds-WP_000983260.1;Parent=gene-CCO57_RS19695;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=CCO57_RS19695;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 82438 84084 . - . ID=gene-CCO57_RS19700;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=CCO57_RS19700;old_locus_tag=CCO57_19680 NZ_NPMC01000014.1 Protein Homology CDS 82438 84084 . - 0 ID=cds-WP_023212405.1;Parent=gene-CCO57_RS19700;Dbxref=GenBank:WP_023212405.1;Name=WP_023212405.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=CCO57_RS19700;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_023212405.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 84087 84137 . - . ID=gene-CCO57_RS24400;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=CCO57_RS24400 NZ_NPMC01000014.1 Protein Homology CDS 84087 84137 . - 0 ID=cds-WP_192930503.1;Parent=gene-CCO57_RS24400;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=CCO57_RS24400;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 84224 84322 . - . ID=gene-CCO57_RS19705;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=CCO57_RS19705;old_locus_tag=CCO57_19685 NZ_NPMC01000014.1 Protein Homology CDS 84224 84322 . - 0 ID=cds-WP_001311244.1;Parent=gene-CCO57_RS19705;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=CCO57_RS19705;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 84674 86194 . + . ID=gene-CCO57_RS19710;Name=CCO57_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19710;old_locus_tag=CCO57_19690 NZ_NPMC01000014.1 Protein Homology CDS 84674 86194 . + 0 ID=cds-WP_000050210.1;Parent=gene-CCO57_RS19710;Dbxref=GenBank:WP_000050210.1;Name=WP_000050210.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=CCO57_RS19710;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000050210.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 86219 86557 . - . ID=gene-CCO57_RS19715;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=CCO57_RS19715;old_locus_tag=CCO57_19695 NZ_NPMC01000014.1 Protein Homology CDS 86219 86557 . - 0 ID=cds-WP_000840996.1;Parent=gene-CCO57_RS19715;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=CCO57_RS19715;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 86664 87512 . + . ID=gene-CCO57_RS19720;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=CCO57_RS19720;old_locus_tag=CCO57_19700 NZ_NPMC01000014.1 Protein Homology CDS 86664 87512 . + 0 ID=cds-WP_001541181.1;Parent=gene-CCO57_RS19720;Dbxref=GenBank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=CCO57_RS19720;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11 NZ_NPMC01000014.1 RefSeq gene 87614 87689 . - . ID=gene-CCO57_RS19725;Name=CCO57_RS19725;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS19725;old_locus_tag=CCO57_19705 NZ_NPMC01000014.1 tRNAscan-SE tRNA 87614 87689 . - . ID=rna-CCO57_RS19725;Parent=gene-CCO57_RS19725;anticodon=(pos:complement(87654..87656));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19725;product=tRNA-Trp NZ_NPMC01000014.1 tRNAscan-SE exon 87614 87689 . - . ID=exon-CCO57_RS19725-1;Parent=rna-CCO57_RS19725;anticodon=(pos:complement(87654..87656));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19725;product=tRNA-Trp NZ_NPMC01000014.1 RefSeq gene 87698 87774 . - . ID=gene-CCO57_RS19730;Name=CCO57_RS19730;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS19730;old_locus_tag=CCO57_19710 NZ_NPMC01000014.1 tRNAscan-SE tRNA 87698 87774 . - . ID=rna-CCO57_RS19730;Parent=gene-CCO57_RS19730;anticodon=(pos:complement(87738..87740));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19730;product=tRNA-Asp NZ_NPMC01000014.1 tRNAscan-SE exon 87698 87774 . - . ID=exon-CCO57_RS19730-1;Parent=rna-CCO57_RS19730;anticodon=(pos:complement(87738..87740));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19730;product=tRNA-Asp NZ_NPMC01000014.1 RefSeq gene 87829 87944 . - . ID=gene-CCO57_RS19735;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO57_RS19735;old_locus_tag=CCO57_19715 NZ_NPMC01000014.1 cmsearch rRNA 87829 87944 . - . ID=rna-CCO57_RS19735;Parent=gene-CCO57_RS19735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS19735;product=5S ribosomal RNA NZ_NPMC01000014.1 cmsearch exon 87829 87944 . - . ID=exon-CCO57_RS19735-1;Parent=rna-CCO57_RS19735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS19735;product=5S ribosomal RNA NZ_NPMC01000014.1 RefSeq gene 88047 88149 . - . ID=gene-CCO57_RS19740;Name=CCO57_RS19740;end_range=88149,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS19740;old_locus_tag=CCO57_19720;partial=true NZ_NPMC01000014.1 cmsearch rRNA 88047 88149 . - . ID=rna-CCO57_RS19740;Parent=gene-CCO57_RS19740;Dbxref=RFAM:RF02541;end_range=88149,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS19740;partial=true;product=23S ribosomal RNA NZ_NPMC01000014.1 cmsearch exon 88047 88149 . - . ID=exon-CCO57_RS19740-1;Parent=rna-CCO57_RS19740;Dbxref=RFAM:RF02541;end_range=88149,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS19740;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPMC01000015.1 1 86586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000015.1 RefSeq region 1 86586 . + . ID=NZ_NPMC01000015.1:1..86586;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000015.1 RefSeq gene 1 1109 . + . ID=gene-CCO57_RS19745;Name=CCO57_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19745;old_locus_tag=CCO57_19725;partial=true;start_range=.,1 NZ_NPMC01000015.1 Protein Homology CDS 1 1109 . + 2 ID=cds-WP_094915099.1;Parent=gene-CCO57_RS19745;Dbxref=GenBank:WP_094915099.1;Name=WP_094915099.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079803.1;locus_tag=CCO57_RS19745;partial=true;product=flagellin;protein_id=WP_094915099.1;start_range=.,1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 1188 2393 . + . ID=gene-CCO57_RS19750;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=CCO57_RS19750;old_locus_tag=CCO57_19730 NZ_NPMC01000015.1 Protein Homology CDS 1188 2393 . + 0 ID=cds-WP_094915100.1;Parent=gene-CCO57_RS19750;Dbxref=GenBank:WP_094915100.1;Name=WP_094915100.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=CCO57_RS19750;product=flagellin lysine-N-methylase;protein_id=WP_094915100.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 2590 3309 . + . ID=gene-CCO57_RS19755;Name=CCO57_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19755;old_locus_tag=CCO57_19735 NZ_NPMC01000015.1 Protein Homology CDS 2590 3309 . + 0 ID=cds-WP_001087453.1;Parent=gene-CCO57_RS19755;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=CCO57_RS19755;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 3368 3919 . + . ID=gene-CCO57_RS19760;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=CCO57_RS19760;old_locus_tag=CCO57_19740 NZ_NPMC01000015.1 Protein Homology CDS 3368 3919 . + 0 ID=cds-WP_023233034.1;Parent=gene-CCO57_RS19760;Dbxref=GenBank:WP_023233034.1;Name=WP_023233034.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=CCO57_RS19760;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_023233034.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 4066 4866 . + . ID=gene-CCO57_RS19765;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=CCO57_RS19765;old_locus_tag=CCO57_19745 NZ_NPMC01000015.1 Protein Homology CDS 4066 4866 . + 0 ID=cds-WP_094915101.1;Parent=gene-CCO57_RS19765;Dbxref=GenBank:WP_094915101.1;Name=WP_094915101.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=CCO57_RS19765;product=cystine ABC transporter substrate-binding protein;protein_id=WP_094915101.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 5020 6006 . + . ID=gene-CCO57_RS19770;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=CCO57_RS19770;old_locus_tag=CCO57_19750 NZ_NPMC01000015.1 Protein Homology CDS 5020 6006 . + 0 ID=cds-WP_001128188.1;Parent=gene-CCO57_RS19770;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=CCO57_RS19770;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 6027 6695 . + . ID=gene-CCO57_RS19775;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=CCO57_RS19775;old_locus_tag=CCO57_19755 NZ_NPMC01000015.1 Protein Homology CDS 6027 6695 . + 0 ID=cds-WP_001158238.1;Parent=gene-CCO57_RS19775;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=CCO57_RS19775;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 6692 7444 . + . ID=gene-CCO57_RS19780;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=CCO57_RS19780;old_locus_tag=CCO57_19760 NZ_NPMC01000015.1 Protein Homology CDS 6692 7444 . + 0 ID=cds-WP_001273033.1;Parent=gene-CCO57_RS19780;Dbxref=GenBank:WP_001273033.1;Name=WP_001273033.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=CCO57_RS19780;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273033.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 7677 8399 . + . ID=gene-CCO57_RS19785;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=CCO57_RS19785;old_locus_tag=CCO57_19765 NZ_NPMC01000015.1 Protein Homology CDS 7677 8399 . + 0 ID=cds-WP_001157169.1;Parent=gene-CCO57_RS19785;Dbxref=GenBank:WP_001157169.1;Name=WP_001157169.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=CCO57_RS19785;product=transcriptional regulator SdiA;protein_id=WP_001157169.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 8467 8691 . - . ID=gene-CCO57_RS19790;Name=CCO57_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19790;old_locus_tag=CCO57_19770 NZ_NPMC01000015.1 Protein Homology CDS 8467 8691 . - 0 ID=cds-WP_000106483.1;Parent=gene-CCO57_RS19790;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=CCO57_RS19790;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 8688 8843 . - . ID=gene-CCO57_RS19795;Name=CCO57_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19795;old_locus_tag=CCO57_19775 NZ_NPMC01000015.1 Protein Homology CDS 8688 8843 . - 0 ID=cds-WP_094915102.1;Parent=gene-CCO57_RS19795;Dbxref=GenBank:WP_094915102.1;Name=WP_094915102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=CCO57_RS19795;product=hypothetical protein;protein_id=WP_094915102.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 9155 9811 . + . ID=gene-CCO57_RS19800;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=CCO57_RS19800;old_locus_tag=CCO57_19780 NZ_NPMC01000015.1 Protein Homology CDS 9155 9811 . + 0 ID=cds-WP_000611323.1;Parent=gene-CCO57_RS19800;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=CCO57_RS19800;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 9808 11640 . + . ID=gene-CCO57_RS19805;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CCO57_RS19805;old_locus_tag=CCO57_19785 NZ_NPMC01000015.1 Protein Homology CDS 9808 11640 . + 0 ID=cds-WP_094915103.1;Parent=gene-CCO57_RS19805;Dbxref=GenBank:WP_094915103.1;Name=WP_094915103.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=CCO57_RS19805;product=excinuclease ABC subunit UvrC;protein_id=WP_094915103.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 11697 12245 . + . ID=gene-CCO57_RS19810;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CCO57_RS19810;old_locus_tag=CCO57_19790 NZ_NPMC01000015.1 Protein Homology CDS 11697 12245 . + 0 ID=cds-WP_001160192.1;Parent=gene-CCO57_RS19810;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=CCO57_RS19810;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 12397 12472 . + . ID=gene-CCO57_RS19815;Name=CCO57_RS19815;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS19815;old_locus_tag=CCO57_19795 NZ_NPMC01000015.1 tRNAscan-SE tRNA 12397 12472 . + . ID=rna-CCO57_RS19815;Parent=gene-CCO57_RS19815;anticodon=(pos:12430..12432);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19815;product=tRNA-Gly NZ_NPMC01000015.1 tRNAscan-SE exon 12397 12472 . + . ID=exon-CCO57_RS19815-1;Parent=rna-CCO57_RS19815;anticodon=(pos:12430..12432);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19815;product=tRNA-Gly NZ_NPMC01000015.1 RefSeq gene 12525 12598 . + . ID=gene-CCO57_RS19820;Name=CCO57_RS19820;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS19820;old_locus_tag=CCO57_19800 NZ_NPMC01000015.1 tRNAscan-SE tRNA 12525 12598 . + . ID=rna-CCO57_RS19820;Parent=gene-CCO57_RS19820;anticodon=(pos:12557..12559);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19820;product=tRNA-Cys NZ_NPMC01000015.1 tRNAscan-SE exon 12525 12598 . + . ID=exon-CCO57_RS19820-1;Parent=rna-CCO57_RS19820;anticodon=(pos:12557..12559);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19820;product=tRNA-Cys NZ_NPMC01000015.1 RefSeq gene 12610 12696 . + . ID=gene-CCO57_RS19825;Name=CCO57_RS19825;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS19825;old_locus_tag=CCO57_19805 NZ_NPMC01000015.1 tRNAscan-SE tRNA 12610 12696 . + . ID=rna-CCO57_RS19825;Parent=gene-CCO57_RS19825;anticodon=(pos:12644..12646);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19825;product=tRNA-Leu NZ_NPMC01000015.1 tRNAscan-SE exon 12610 12696 . + . ID=exon-CCO57_RS19825-1;Parent=rna-CCO57_RS19825;anticodon=(pos:12644..12646);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS19825;product=tRNA-Leu NZ_NPMC01000015.1 RefSeq gene 12946 13278 . + . ID=gene-CCO57_RS19830;Name=CCO57_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19830;old_locus_tag=CCO57_19810 NZ_NPMC01000015.1 Protein Homology CDS 12946 13278 . + 0 ID=cds-WP_001659711.1;Parent=gene-CCO57_RS19830;Dbxref=GenBank:WP_001659711.1;Name=WP_001659711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=CCO57_RS19830;product=hypothetical protein;protein_id=WP_001659711.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 13492 14931 . + . ID=gene-CCO57_RS19835;Name=CCO57_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19835;old_locus_tag=CCO57_19815 NZ_NPMC01000015.1 Protein Homology CDS 13492 14931 . + 0 ID=cds-WP_077911323.1;Parent=gene-CCO57_RS19835;Dbxref=GenBank:WP_077911323.1;Name=WP_077911323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=CCO57_RS19835;product=SH3 domain-containing C40 family peptidase;protein_id=WP_077911323.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 15144 15470 . + . ID=gene-CCO57_RS19840;Name=CCO57_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19840;old_locus_tag=CCO57_19820 NZ_NPMC01000015.1 Protein Homology CDS 15144 15470 . + 0 ID=cds-WP_000240837.1;Parent=gene-CCO57_RS19840;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=CCO57_RS19840;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 15709 16374 . + . ID=gene-CCO57_RS19845;Name=CCO57_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19845;old_locus_tag=CCO57_19825 NZ_NPMC01000015.1 Protein Homology CDS 15709 16374 . + 0 ID=cds-WP_094882123.1;Parent=gene-CCO57_RS19845;Dbxref=GenBank:WP_094882123.1;Name=WP_094882123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=CCO57_RS19845;product=YecA family protein;protein_id=WP_094882123.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 16449 17660 . - . ID=gene-CCO57_RS19850;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=CCO57_RS19850;old_locus_tag=CCO57_19830 NZ_NPMC01000015.1 Protein Homology CDS 16449 17660 . - 0 ID=cds-WP_001562965.1;Parent=gene-CCO57_RS19850;Dbxref=GenBank:WP_001562965.1;Name=WP_001562965.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=CCO57_RS19850;product=tyrosine transporter TyrP;protein_id=WP_001562965.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 17887 18126 . + . ID=gene-CCO57_RS19855;Name=CCO57_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19855;old_locus_tag=CCO57_19835 NZ_NPMC01000015.1 Protein Homology CDS 17887 18126 . + 0 ID=cds-WP_000377241.1;Parent=gene-CCO57_RS19855;Dbxref=GenBank:WP_000377241.1;Name=WP_000377241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=CCO57_RS19855;product=YecH family metal-binding protein;protein_id=WP_000377241.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 18172 18669 . - . ID=gene-CCO57_RS19860;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=CCO57_RS19860;old_locus_tag=CCO57_19840 NZ_NPMC01000015.1 Protein Homology CDS 18172 18669 . - 0 ID=cds-WP_038395737.1;Parent=gene-CCO57_RS19860;Dbxref=GenBank:WP_038395737.1;Name=WP_038395737.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=CCO57_RS19860;product=non-heme ferritin;protein_id=WP_038395737.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 18909 19244 . - . ID=gene-CCO57_RS19865;Name=CCO57_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19865;old_locus_tag=CCO57_19845 NZ_NPMC01000015.1 Protein Homology CDS 18909 19244 . - 0 ID=cds-WP_000803229.1;Parent=gene-CCO57_RS19865;Dbxref=GenBank:WP_000803229.1;Name=WP_000803229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=CCO57_RS19865;product=YecR-like lipofamily protein;protein_id=WP_000803229.1;transl_table=11 NZ_NPMC01000015.1 RefSeq pseudogene 19499 20137 . + . ID=gene-CCO57_RS19870;Name=CCO57_RS19870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS19870;old_locus_tag=CCO57_19850;pseudo=true NZ_NPMC01000015.1 Protein Homology CDS 19499 20137 . + 0 ID=cds-CCO57_RS19870;Parent=gene-CCO57_RS19870;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=CCO57_RS19870;product=RpiB/LacA/LacB family sugar-phosphate isomerase;pseudo=true;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 20316 20819 . - . ID=gene-CCO57_RS19875;Name=CCO57_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19875;old_locus_tag=CCO57_19855 NZ_NPMC01000015.1 Protein Homology CDS 20316 20819 . - 0 ID=cds-WP_000741707.1;Parent=gene-CCO57_RS19875;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=CCO57_RS19875;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 21377 21934 . + . ID=gene-CCO57_RS19880;Name=CCO57_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19880;old_locus_tag=CCO57_19860 NZ_NPMC01000015.1 Protein Homology CDS 21377 21934 . + 0 ID=cds-WP_094915104.1;Parent=gene-CCO57_RS19880;Dbxref=GenBank:WP_094915104.1;Name=WP_094915104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=CCO57_RS19880;product=DJ-1/PfpI family protein;protein_id=WP_094915104.1;transl_table=11 NZ_NPMC01000015.1 RefSeq pseudogene 22163 22344 . + . ID=gene-CCO57_RS19885;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=CCO57_RS19885;old_locus_tag=CCO57_19865;partial=true;pseudo=true;start_range=.,22163 NZ_NPMC01000015.1 Protein Homology CDS 22163 22344 . + 0 ID=cds-CCO57_RS19885;Parent=gene-CCO57_RS19885;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=CCO57_RS19885;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;start_range=.,22163;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 22567 23370 . + . ID=gene-CCO57_RS19890;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=CCO57_RS19890;old_locus_tag=CCO57_19870 NZ_NPMC01000015.1 Protein Homology CDS 22567 23370 . + 0 ID=cds-WP_000840114.1;Parent=gene-CCO57_RS19890;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=CCO57_RS19890;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 23345 24766 . + . ID=gene-CCO57_RS19895;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=CCO57_RS19895;old_locus_tag=CCO57_19875 NZ_NPMC01000015.1 Protein Homology CDS 23345 24766 . + 0 ID=cds-WP_000089042.1;Parent=gene-CCO57_RS19895;Dbxref=GenBank:WP_000089042.1;Name=WP_000089042.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=CCO57_RS19895;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 24784 25212 . - . ID=gene-CCO57_RS19900;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=CCO57_RS19900;old_locus_tag=CCO57_19880 NZ_NPMC01000015.1 Protein Homology CDS 24784 25212 . - 0 ID=cds-WP_000122606.1;Parent=gene-CCO57_RS19900;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=CCO57_RS19900;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 25209 25325 . - . ID=gene-CCO57_RS19905;Name=CCO57_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19905;old_locus_tag=CCO57_19885 NZ_NPMC01000015.1 Protein Homology CDS 25209 25325 . - 0 ID=cds-WP_001617301.1;Parent=gene-CCO57_RS19905;Dbxref=GenBank:WP_001617301.1;Name=WP_001617301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=CCO57_RS19905;product=hypothetical protein;protein_id=WP_001617301.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 26008 26349 . + . ID=gene-CCO57_RS19910;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=CCO57_RS19910;old_locus_tag=CCO57_19890 NZ_NPMC01000015.1 Protein Homology CDS 26008 26349 . + 0 ID=cds-WP_001518146.1;Parent=gene-CCO57_RS19910;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=CCO57_RS19910;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 26346 26930 . + . ID=gene-CCO57_RS19915;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=CCO57_RS19915;old_locus_tag=CCO57_19895 NZ_NPMC01000015.1 Protein Homology CDS 26346 26930 . + 0 ID=cds-WP_000605987.1;Parent=gene-CCO57_RS19915;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=CCO57_RS19915;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 27055 27942 . + . ID=gene-CCO57_RS19920;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=CCO57_RS19920;old_locus_tag=CCO57_19900 NZ_NPMC01000015.1 Protein Homology CDS 27055 27942 . + 0 ID=cds-WP_000906312.1;Parent=gene-CCO57_RS19920;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=CCO57_RS19920;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 27939 28868 . + . ID=gene-CCO57_RS19925;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=CCO57_RS19925;old_locus_tag=CCO57_19905 NZ_NPMC01000015.1 Protein Homology CDS 27939 28868 . + 0 ID=cds-WP_000795653.1;Parent=gene-CCO57_RS19925;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=CCO57_RS19925;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 28873 30888 . + . ID=gene-CCO57_RS19930;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=CCO57_RS19930;old_locus_tag=CCO57_19910 NZ_NPMC01000015.1 Protein Homology CDS 28873 30888 . + 0 ID=cds-WP_094915105.1;Parent=gene-CCO57_RS19930;Dbxref=GenBank:WP_094915105.1;Name=WP_094915105.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=CCO57_RS19930;product=chemotaxis protein CheA;protein_id=WP_094915105.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 30909 31412 . + . ID=gene-CCO57_RS19935;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=CCO57_RS19935;old_locus_tag=CCO57_19915 NZ_NPMC01000015.1 Protein Homology CDS 30909 31412 . + 0 ID=cds-WP_000147295.1;Parent=gene-CCO57_RS19935;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=CCO57_RS19935;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 31649 33310 . + . ID=gene-CCO57_RS19940;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=CCO57_RS19940;old_locus_tag=CCO57_19920 NZ_NPMC01000015.1 Protein Homology CDS 31649 33310 . + 0 ID=cds-WP_094915106.1;Parent=gene-CCO57_RS19940;Dbxref=GenBank:WP_094915106.1;Name=WP_094915106.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=CCO57_RS19940;product=methyl-accepting chemotaxis protein II;protein_id=WP_094915106.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 33464 34330 . + . ID=gene-CCO57_RS19945;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=CCO57_RS19945;old_locus_tag=CCO57_19925 NZ_NPMC01000015.1 Protein Homology CDS 33464 34330 . + 0 ID=cds-WP_000204370.1;Parent=gene-CCO57_RS19945;Dbxref=GenBank:WP_000204370.1;Name=WP_000204370.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=CCO57_RS19945;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204370.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 34327 35376 . + . ID=gene-CCO57_RS19950;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=CCO57_RS19950;old_locus_tag=CCO57_19930 NZ_NPMC01000015.1 Protein Homology CDS 34327 35376 . + 0 ID=cds-WP_000036395.1;Parent=gene-CCO57_RS19950;Dbxref=GenBank:WP_000036395.1;Name=WP_000036395.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=CCO57_RS19950;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036395.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 35394 35783 . + . ID=gene-CCO57_RS19955;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=CCO57_RS19955;old_locus_tag=CCO57_19935 NZ_NPMC01000015.1 Protein Homology CDS 35394 35783 . + 0 ID=cds-WP_000763861.1;Parent=gene-CCO57_RS19955;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=CCO57_RS19955;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 35794 36438 . + . ID=gene-CCO57_RS19960;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=CCO57_RS19960;old_locus_tag=CCO57_19940 NZ_NPMC01000015.1 Protein Homology CDS 35794 36438 . + 0 ID=cds-WP_000983586.1;Parent=gene-CCO57_RS19960;Dbxref=GenBank:WP_000983586.1;Name=WP_000983586.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=CCO57_RS19960;product=protein phosphatase CheZ;protein_id=WP_000983586.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 36632 37783 . + . ID=gene-CCO57_RS19965;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=CCO57_RS19965;old_locus_tag=CCO57_19945 NZ_NPMC01000015.1 Protein Homology CDS 36632 37783 . + 0 ID=cds-WP_000797081.1;Parent=gene-CCO57_RS19965;Dbxref=GenBank:WP_000797081.1;Name=WP_000797081.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=CCO57_RS19965;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797081.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 37776 39854 . + . ID=gene-CCO57_RS19970;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO57_RS19970;old_locus_tag=CCO57_19950 NZ_NPMC01000015.1 Protein Homology CDS 37776 39854 . + 0 ID=cds-WP_094915107.1;Parent=gene-CCO57_RS19970;Dbxref=GenBank:WP_094915107.1;Name=WP_094915107.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=CCO57_RS19970;product=flagellar biosynthesis protein FlhA;protein_id=WP_094915107.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 39854 40246 . + . ID=gene-CCO57_RS19975;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=CCO57_RS19975;old_locus_tag=CCO57_19955 NZ_NPMC01000015.1 Protein Homology CDS 39854 40246 . + 0 ID=cds-WP_001233619.1;Parent=gene-CCO57_RS19975;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=CCO57_RS19975;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 40483 41622 . + . ID=gene-CCO57_RS19980;Name=CCO57_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19980;old_locus_tag=CCO57_19960 NZ_NPMC01000015.1 Protein Homology CDS 40483 41622 . + 0 ID=cds-WP_000989909.1;Parent=gene-CCO57_RS19980;Dbxref=GenBank:WP_000989909.1;Name=WP_000989909.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=CCO57_RS19980;product=glycoside hydrolase family 88/105 protein;protein_id=WP_000989909.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 41676 43547 . - . ID=gene-CCO57_RS19985;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO57_RS19985;old_locus_tag=CCO57_19965 NZ_NPMC01000015.1 Protein Homology CDS 41676 43547 . - 0 ID=cds-WP_000142857.1;Parent=gene-CCO57_RS19985;Dbxref=GenBank:WP_000142857.1;Name=WP_000142857.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=CCO57_RS19985;product=penicillin-binding protein 2;protein_id=WP_000142857.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 43736 45469 . - . ID=gene-CCO57_RS19990;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CCO57_RS19990;old_locus_tag=CCO57_19970 NZ_NPMC01000015.1 Protein Homology CDS 43736 45469 . - 0 ID=cds-WP_094915108.1;Parent=gene-CCO57_RS19990;Dbxref=GenBank:WP_094915108.1;Name=WP_094915108.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=CCO57_RS19990;product=arginine--tRNA ligase;protein_id=WP_094915108.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 45706 46275 . + . ID=gene-CCO57_RS19995;Name=CCO57_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS19995;old_locus_tag=CCO57_19975 NZ_NPMC01000015.1 Protein Homology CDS 45706 46275 . + 0 ID=cds-WP_000024794.1;Parent=gene-CCO57_RS19995;Dbxref=GenBank:WP_000024794.1;Name=WP_000024794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=CCO57_RS19995;product=VOC family protein;protein_id=WP_000024794.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 46295 47041 . + . ID=gene-CCO57_RS20000;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=CCO57_RS20000;old_locus_tag=CCO57_19980 NZ_NPMC01000015.1 Protein Homology CDS 46295 47041 . + 0 ID=cds-WP_001185781.1;Parent=gene-CCO57_RS20000;Dbxref=GenBank:WP_001185781.1;Name=WP_001185781.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=CCO57_RS20000;product=copper homeostasis protein CutC;protein_id=WP_001185781.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 47277 48248 . - . ID=gene-CCO57_RS20010;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=CCO57_RS20010;old_locus_tag=CCO57_19990 NZ_NPMC01000015.1 Protein Homology CDS 47277 48248 . - 0 ID=cds-WP_086776669.1;Parent=gene-CCO57_RS20010;Dbxref=GenBank:WP_086776669.1;Name=WP_086776669.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=CCO57_RS20010;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_086776669.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 48245 48988 . - . ID=gene-CCO57_RS20015;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=CCO57_RS20015;old_locus_tag=CCO57_19995 NZ_NPMC01000015.1 Protein Homology CDS 48245 48988 . - 0 ID=cds-WP_000019607.1;Parent=gene-CCO57_RS20015;Dbxref=GenBank:WP_000019607.1;Name=WP_000019607.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=CCO57_RS20015;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019607.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 49029 49424 . - . ID=gene-CCO57_RS20020;Name=CCO57_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20020;old_locus_tag=CCO57_20000 NZ_NPMC01000015.1 Protein Homology CDS 49029 49424 . - 0 ID=cds-WP_000252975.1;Parent=gene-CCO57_RS20020;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=CCO57_RS20020;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 49477 50295 . - . ID=gene-CCO57_RS20025;Name=CCO57_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20025;old_locus_tag=CCO57_20005 NZ_NPMC01000015.1 Protein Homology CDS 49477 50295 . - 0 ID=cds-WP_000639226.1;Parent=gene-CCO57_RS20025;Dbxref=GenBank:WP_000639226.1;Name=WP_000639226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=CCO57_RS20025;product=DUF72 domain-containing protein;protein_id=WP_000639226.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 50292 50858 . - . ID=gene-CCO57_RS20030;Name=CCO57_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20030;old_locus_tag=CCO57_20010 NZ_NPMC01000015.1 Protein Homology CDS 50292 50858 . - 0 ID=cds-WP_000916144.1;Parent=gene-CCO57_RS20030;Dbxref=GenBank:WP_000916144.1;Name=WP_000916144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=CCO57_RS20030;product=hydrolase;protein_id=WP_000916144.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 51183 52955 . + . ID=gene-CCO57_RS20035;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CCO57_RS20035;old_locus_tag=CCO57_20015 NZ_NPMC01000015.1 Protein Homology CDS 51183 52955 . + 0 ID=cds-WP_094915109.1;Parent=gene-CCO57_RS20035;Dbxref=GenBank:WP_094915109.1;Name=WP_094915109.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=CCO57_RS20035;product=aspartate--tRNA ligase;protein_id=WP_094915109.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 53058 53510 . + . ID=gene-CCO57_RS20040;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=CCO57_RS20040;old_locus_tag=CCO57_20020 NZ_NPMC01000015.1 Protein Homology CDS 53058 53510 . + 0 ID=cds-WP_000653693.1;Parent=gene-CCO57_RS20040;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=CCO57_RS20040;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 53540 54280 . + . ID=gene-CCO57_RS20045;Name=CCO57_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20045;old_locus_tag=CCO57_20025 NZ_NPMC01000015.1 Protein Homology CDS 53540 54280 . + 0 ID=cds-WP_000907242.1;Parent=gene-CCO57_RS20045;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=CCO57_RS20045;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 54317 54838 . + . ID=gene-CCO57_RS20050;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=CCO57_RS20050;old_locus_tag=CCO57_20030 NZ_NPMC01000015.1 Protein Homology CDS 54317 54838 . + 0 ID=cds-WP_000022509.1;Parent=gene-CCO57_RS20050;Dbxref=GenBank:WP_000022509.1;Name=WP_000022509.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=CCO57_RS20050;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022509.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 54840 55439 . - . ID=gene-CCO57_RS20055;Name=CCO57_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20055;old_locus_tag=CCO57_20035 NZ_NPMC01000015.1 Protein Homology CDS 54840 55439 . - 0 ID=cds-WP_000716753.1;Parent=gene-CCO57_RS20055;Dbxref=GenBank:WP_000716753.1;Name=WP_000716753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=CCO57_RS20055;product=YebB family permuted papain-like enzyme;protein_id=WP_000716753.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 55648 56340 . + . ID=gene-CCO57_RS20060;Name=CCO57_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20060;old_locus_tag=CCO57_20040 NZ_NPMC01000015.1 Protein Homology CDS 55648 56340 . + 0 ID=cds-WP_176453485.1;Parent=gene-CCO57_RS20060;Dbxref=GenBank:WP_176453485.1;Name=WP_176453485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=CCO57_RS20060;product=hypothetical protein;protein_id=WP_176453485.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 56699 57310 . + . ID=gene-CCO57_RS20065;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CCO57_RS20065;old_locus_tag=CCO57_20045 NZ_NPMC01000015.1 Protein Homology CDS 56699 57310 . + 0 ID=cds-WP_000580333.1;Parent=gene-CCO57_RS20065;Dbxref=GenBank:WP_000580333.1;Name=WP_000580333.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=CCO57_RS20065;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580333.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 57319 58329 . + . ID=gene-CCO57_RS20070;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CCO57_RS20070;old_locus_tag=CCO57_20050 NZ_NPMC01000015.1 Protein Homology CDS 57319 58329 . + 0 ID=cds-WP_000568502.1;Parent=gene-CCO57_RS20070;Dbxref=GenBank:WP_000568502.1;Name=WP_000568502.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=CCO57_RS20070;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568502.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 58408 59193 . - . ID=gene-CCO57_RS20075;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=CCO57_RS20075;old_locus_tag=CCO57_20055 NZ_NPMC01000015.1 Protein Homology CDS 58408 59193 . - 0 ID=cds-WP_000571507.1;Parent=gene-CCO57_RS20075;Dbxref=GenBank:WP_000571507.1;Name=WP_000571507.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=CCO57_RS20075;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571507.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 59190 59945 . - . ID=gene-CCO57_RS20080;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=CCO57_RS20080;old_locus_tag=CCO57_20060 NZ_NPMC01000015.1 Protein Homology CDS 59190 59945 . - 0 ID=cds-WP_000203023.1;Parent=gene-CCO57_RS20080;Dbxref=GenBank:WP_000203023.1;Name=WP_000203023.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=CCO57_RS20080;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203023.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 60024 60968 . + . ID=gene-CCO57_RS20085;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=CCO57_RS20085;old_locus_tag=CCO57_20065 NZ_NPMC01000015.1 Protein Homology CDS 60024 60968 . + 0 ID=cds-WP_000939597.1;Parent=gene-CCO57_RS20085;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=CCO57_RS20085;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 60984 62303 . + . ID=gene-CCO57_RS20090;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=CCO57_RS20090;old_locus_tag=CCO57_20070 NZ_NPMC01000015.1 Protein Homology CDS 60984 62303 . + 0 ID=cds-WP_001184030.1;Parent=gene-CCO57_RS20090;Dbxref=GenBank:WP_001184030.1;Name=WP_001184030.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=CCO57_RS20090;product=murein DD-endopeptidase MepM;protein_id=WP_001184030.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 62420 63391 . + . ID=gene-CCO57_RS20100;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=CCO57_RS20100;old_locus_tag=CCO57_20080 NZ_NPMC01000015.1 Protein Homology CDS 62420 63391 . + 0 ID=cds-WP_000448397.1;Parent=gene-CCO57_RS20100;Dbxref=GenBank:WP_000448397.1;Name=WP_000448397.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=CCO57_RS20100;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448397.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 63464 64906 . - . ID=gene-CCO57_RS20105;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CCO57_RS20105;old_locus_tag=CCO57_20085 NZ_NPMC01000015.1 Protein Homology CDS 63464 64906 . - 0 ID=cds-WP_000091156.1;Parent=gene-CCO57_RS20105;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=CCO57_RS20105;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 65030 65899 . - . ID=gene-CCO57_RS20110;Name=CCO57_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20110;old_locus_tag=CCO57_20090 NZ_NPMC01000015.1 Protein Homology CDS 65030 65899 . - 0 ID=cds-WP_001056719.1;Parent=gene-CCO57_RS20110;Dbxref=GenBank:WP_001056719.1;Name=WP_001056719.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=CCO57_RS20110;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001056719.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 66241 67716 . + . ID=gene-CCO57_RS20120;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CCO57_RS20120;old_locus_tag=CCO57_20100 NZ_NPMC01000015.1 Protein Homology CDS 66241 67716 . + 0 ID=cds-WP_000301711.1;Parent=gene-CCO57_RS20120;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=CCO57_RS20120;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 67951 69762 . + . ID=gene-CCO57_RS20125;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=CCO57_RS20125;old_locus_tag=CCO57_20105 NZ_NPMC01000015.1 Protein Homology CDS 67951 69762 . + 0 ID=cds-WP_001069124.1;Parent=gene-CCO57_RS20125;Dbxref=GenBank:WP_001069124.1;Name=WP_001069124.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=CCO57_RS20125;product=phosphogluconate dehydratase;protein_id=WP_001069124.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 69800 70441 . + . ID=gene-CCO57_RS20130;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=CCO57_RS20130;old_locus_tag=CCO57_20110 NZ_NPMC01000015.1 Protein Homology CDS 69800 70441 . + 0 ID=cds-WP_000800497.1;Parent=gene-CCO57_RS20130;Dbxref=GenBank:WP_000800497.1;Name=WP_000800497.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=CCO57_RS20130;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800497.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 70541 71719 . - . ID=gene-CCO57_RS20135;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=CCO57_RS20135;old_locus_tag=CCO57_20115 NZ_NPMC01000015.1 Protein Homology CDS 70541 71719 . - 0 ID=cds-WP_001529220.1;Parent=gene-CCO57_RS20135;Dbxref=GenBank:WP_001529220.1;Name=WP_001529220.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=CCO57_RS20135;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_001529220.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 71850 72140 . + . ID=gene-CCO57_RS20140;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=CCO57_RS20140;old_locus_tag=CCO57_20120 NZ_NPMC01000015.1 Protein Homology CDS 71850 72140 . + 0 ID=cds-WP_000257723.1;Parent=gene-CCO57_RS20140;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=CCO57_RS20140;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 72208 72561 . + . ID=gene-CCO57_RS20145;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=CCO57_RS20145;old_locus_tag=CCO57_20125 NZ_NPMC01000015.1 Protein Homology CDS 72208 72561 . + 0 ID=cds-WP_001042123.1;Parent=gene-CCO57_RS20145;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=CCO57_RS20145;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 72655 73314 . + . ID=gene-CCO57_RS20150;Name=CCO57_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20150;old_locus_tag=CCO57_20130 NZ_NPMC01000015.1 Protein Homology CDS 72655 73314 . + 0 ID=cds-WP_000024707.1;Parent=gene-CCO57_RS20150;Dbxref=GenBank:WP_000024707.1;Name=WP_000024707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=CCO57_RS20150;product=tellurite resistance TerB family protein;protein_id=WP_000024707.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 73527 75578 . + . ID=gene-CCO57_RS20155;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=CCO57_RS20155;old_locus_tag=CCO57_20135 NZ_NPMC01000015.1 Protein Homology CDS 73527 75578 . + 0 ID=cds-WP_094915110.1;Parent=gene-CCO57_RS20155;Dbxref=GenBank:WP_094915110.1;Name=WP_094915110.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=CCO57_RS20155;product=oligopeptidase B;protein_id=WP_094915110.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 75613 76311 . - . ID=gene-CCO57_RS20160;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=CCO57_RS20160;old_locus_tag=CCO57_20140 NZ_NPMC01000015.1 Protein Homology CDS 75613 76311 . - 0 ID=cds-WP_000944282.1;Parent=gene-CCO57_RS20160;Dbxref=GenBank:WP_000944282.1;Name=WP_000944282.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=CCO57_RS20160;product=exodeoxyribonuclease X;protein_id=WP_000944282.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 76335 76991 . - . ID=gene-CCO57_RS20165;Name=CCO57_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20165;old_locus_tag=CCO57_20145 NZ_NPMC01000015.1 Protein Homology CDS 76335 76991 . - 0 ID=cds-WP_094915111.1;Parent=gene-CCO57_RS20165;Dbxref=GenBank:WP_094915111.1;Name=WP_094915111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=CCO57_RS20165;product=carbon-nitrogen hydrolase family protein;protein_id=WP_094915111.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 77099 77329 . - . ID=gene-CCO57_RS20170;Name=CCO57_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20170;old_locus_tag=CCO57_20150 NZ_NPMC01000015.1 Protein Homology CDS 77099 77329 . - 0 ID=cds-WP_000856225.1;Parent=gene-CCO57_RS20170;Dbxref=GenBank:WP_000856225.1;Name=WP_000856225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=CCO57_RS20170;product=DNA polymerase III subunit theta;protein_id=WP_000856225.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 77467 77841 . + . ID=gene-CCO57_RS20175;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=CCO57_RS20175;old_locus_tag=CCO57_20155 NZ_NPMC01000015.1 Protein Homology CDS 77467 77841 . + 0 ID=cds-WP_000168393.1;Parent=gene-CCO57_RS20175;Dbxref=GenBank:WP_000168393.1;Name=WP_000168393.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=CCO57_RS20175;product=CopC domain-containing protein YobA;protein_id=WP_000168393.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 77842 78717 . + . ID=gene-CCO57_RS20180;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=CCO57_RS20180;old_locus_tag=CCO57_20160 NZ_NPMC01000015.1 Protein Homology CDS 77842 78717 . + 0 ID=cds-WP_000979695.1;Parent=gene-CCO57_RS20180;Dbxref=GenBank:WP_000979695.1;Name=WP_000979695.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=CCO57_RS20180;product=copper homeostasis membrane protein CopD;protein_id=WP_000979695.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 78734 79087 . + . ID=gene-CCO57_RS20185;Name=CCO57_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20185;old_locus_tag=CCO57_20165 NZ_NPMC01000015.1 Protein Homology CDS 78734 79087 . + 0 ID=cds-WP_000722370.1;Parent=gene-CCO57_RS20185;Dbxref=GenBank:WP_000722370.1;Name=WP_000722370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=CCO57_RS20185;product=YebY family protein;protein_id=WP_000722370.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 79470 80549 . - . ID=gene-CCO57_RS20195;Name=CCO57_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20195;old_locus_tag=CCO57_20175 NZ_NPMC01000015.1 Protein Homology CDS 79470 80549 . - 0 ID=cds-WP_094915112.1;Parent=gene-CCO57_RS20195;Dbxref=GenBank:WP_094915112.1;Name=WP_094915112.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=CCO57_RS20195;product=tyrosine-type recombinase/integrase;protein_id=WP_094915112.1;transl_table=11 NZ_NPMC01000015.1 RefSeq pseudogene 80579 81730 . - . ID=gene-CCO57_RS20200;Name=CCO57_RS20200;end_range=81730,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS20200;old_locus_tag=CCO57_20180;partial=true;pseudo=true;start_range=.,80579 NZ_NPMC01000015.1 Protein Homology CDS 80579 81730 . - 0 ID=cds-CCO57_RS20200;Parent=gene-CCO57_RS20200;Note=The RecE (also known as exonuclease VIII) pathway is an alternative pathway for the initiation of homologous recombination in Escherichia coli. The RecE pathway is activated in recB%2C recC sbcA (suppressors of recB and recC) mutants. Activation of the RecE pathway results in the production of at least two phage proteins relevant for recombinational repair. RecE is a duplex DNA-specific exonuclease which produces 3' overhangs in duplex DNA by preferentially degrading the 5'-ending strands. Recombinational repair of E.coli chromosomal DNA involves as well other proteins: RecA%2C RecF%2C RecJ%2C RecO%2C RecR%2C and RuvC.%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=81730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=CCO57_RS20200;partial=true;product=exonuclease VIII;pseudo=true;start_range=.,80579;transl_table=11 NZ_NPMC01000015.1 RefSeq pseudogene 81722 81970 . + . ID=gene-CCO57_RS20205;Name=CCO57_RS20205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS20205;old_locus_tag=CCO57_20185;partial=true;pseudo=true;start_range=.,81722 NZ_NPMC01000015.1 Protein Homology CDS 81722 81970 . + 0 ID=cds-CCO57_RS20205;Parent=gene-CCO57_RS20205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=CCO57_RS20205;partial=true;product=glycoside hydrolase family 19 protein;pseudo=true;start_range=.,81722;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 81967 82500 . + . ID=gene-CCO57_RS20210;Name=CCO57_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20210;old_locus_tag=CCO57_20190 NZ_NPMC01000015.1 Protein Homology CDS 81967 82500 . + 0 ID=cds-WP_001529209.1;Parent=gene-CCO57_RS20210;Dbxref=GenBank:WP_001529209.1;Name=WP_001529209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=CCO57_RS20210;product=DUF2514 domain-containing protein;protein_id=WP_001529209.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 82757 82924 . - . ID=gene-CCO57_RS20215;Name=CCO57_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20215;old_locus_tag=CCO57_20195 NZ_NPMC01000015.1 Protein Homology CDS 82757 82924 . - 0 ID=cds-WP_000789530.1;Parent=gene-CCO57_RS20215;Dbxref=GenBank:WP_000789530.1;Name=WP_000789530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=CCO57_RS20215;product=lytic enzyme;protein_id=WP_000789530.1;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 83227 83718 . + . ID=gene-CCO57_RS20220;Name=CCO57_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20220;old_locus_tag=CCO57_20200 NZ_NPMC01000015.1 Protein Homology CDS 83227 83718 . + 0 ID=cds-WP_000348550.1;Parent=gene-CCO57_RS20220;Dbxref=GenBank:WP_000348550.1;Name=WP_000348550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=CCO57_RS20220;product=DUF1441 family protein;protein_id=WP_000348550.1;transl_table=11 NZ_NPMC01000015.1 RefSeq pseudogene 83705 84272 . + . ID=gene-CCO57_RS20225;Name=CCO57_RS20225;end_range=84272,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS20225;old_locus_tag=CCO57_20205;partial=true;pseudo=true NZ_NPMC01000015.1 Protein Homology CDS 83705 84272 . + 0 ID=cds-CCO57_RS20225;Parent=gene-CCO57_RS20225;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016887;end_range=84272,.;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459887.1;locus_tag=CCO57_RS20225;partial=true;product=phage terminase large subunit family protein;pseudo=true;transl_table=11 NZ_NPMC01000015.1 RefSeq pseudogene 84271 85530 . + . ID=gene-CCO57_RS20230;Name=CCO57_RS20230;end_range=85530,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS20230;old_locus_tag=CCO57_20210;partial=true;pseudo=true;start_range=.,84271 NZ_NPMC01000015.1 Protein Homology CDS 84271 85530 . + 0 ID=cds-CCO57_RS20230;Parent=gene-CCO57_RS20230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=85530,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=CCO57_RS20230;partial=true;product=phage tail protein;pseudo=true;start_range=.,84271;transl_table=11 NZ_NPMC01000015.1 RefSeq pseudogene 85529 85900 . + . ID=gene-CCO57_RS20235;Name=CCO57_RS20235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS20235;old_locus_tag=CCO57_20215;partial=true;pseudo=true;start_range=.,85529 NZ_NPMC01000015.1 Protein Homology CDS 85529 85900 . + 0 ID=cds-CCO57_RS20235;Parent=gene-CCO57_RS20235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=CCO57_RS20235;partial=true;product=macro domain-containing protein;pseudo=true;start_range=.,85529;transl_table=11 NZ_NPMC01000015.1 RefSeq gene 85890 86474 . + . ID=gene-CCO57_RS20240;Name=CCO57_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20240;old_locus_tag=CCO57_20220 NZ_NPMC01000015.1 Protein Homology CDS 85890 86474 . + 0 ID=cds-WP_094915114.1;Parent=gene-CCO57_RS20240;Dbxref=GenBank:WP_094915114.1;Name=WP_094915114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=CCO57_RS20240;product=tail fiber assembly protein;protein_id=WP_094915114.1;transl_table=11 ##sequence-region NZ_NPMC01000016.1 1 79456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000016.1 RefSeq region 1 79456 . + . ID=NZ_NPMC01000016.1:1..79456;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000016.1 RefSeq gene 294 653 . + . ID=gene-CCO57_RS20245;Name=CCO57_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20245;old_locus_tag=CCO57_20225 NZ_NPMC01000016.1 Protein Homology CDS 294 653 . + 0 ID=cds-WP_001605585.1;Parent=gene-CCO57_RS20245;Dbxref=GenBank:WP_001605585.1;Name=WP_001605585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=CCO57_RS20245;product=YdiL family protein;protein_id=WP_001605585.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 794 2005 . + . ID=gene-CCO57_RS20250;Name=CCO57_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20250;old_locus_tag=CCO57_20230 NZ_NPMC01000016.1 Protein Homology CDS 794 2005 . + 0 ID=cds-WP_001605586.1;Parent=gene-CCO57_RS20250;Dbxref=GenBank:WP_001605586.1;Name=WP_001605586.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=CCO57_RS20250;product=MFS transporter;protein_id=WP_001605586.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 2369 3604 . + . ID=gene-CCO57_RS20255;Name=CCO57_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20255;old_locus_tag=CCO57_20235 NZ_NPMC01000016.1 Protein Homology CDS 2369 3604 . + 0 ID=cds-WP_000081209.1;Parent=gene-CCO57_RS20255;Dbxref=GenBank:WP_000081209.1;Name=WP_000081209.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=CCO57_RS20255;product=MFS transporter;protein_id=WP_000081209.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 3671 4537 . + . ID=gene-CCO57_RS20260;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=CCO57_RS20260;old_locus_tag=CCO57_20240 NZ_NPMC01000016.1 Protein Homology CDS 3671 4537 . + 0 ID=cds-WP_023207846.1;Parent=gene-CCO57_RS20260;Dbxref=GenBank:WP_023207846.1;Name=WP_023207846.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=CCO57_RS20260;product=quinate/shikimate dehydrogenase;protein_id=WP_023207846.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 4582 5340 . + . ID=gene-CCO57_RS20265;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CCO57_RS20265;old_locus_tag=CCO57_20245 NZ_NPMC01000016.1 Protein Homology CDS 4582 5340 . + 0 ID=cds-WP_023207847.1;Parent=gene-CCO57_RS20265;Dbxref=GenBank:WP_023207847.1;Name=WP_023207847.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=CCO57_RS20265;product=type I 3-dehydroquinate dehydratase;protein_id=WP_023207847.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 5495 7090 . + . ID=gene-CCO57_RS20270;Name=CCO57_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20270;old_locus_tag=CCO57_20250 NZ_NPMC01000016.1 Protein Homology CDS 5495 7090 . + 0 ID=cds-WP_024157010.1;Parent=gene-CCO57_RS20270;Dbxref=GenBank:WP_024157010.1;Name=WP_024157010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=CCO57_RS20270;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_024157010.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 7104 8255 . + . ID=gene-CCO57_RS20275;Name=CCO57_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20275;old_locus_tag=CCO57_20255 NZ_NPMC01000016.1 Protein Homology CDS 7104 8255 . + 0 ID=cds-WP_094915115.1;Parent=gene-CCO57_RS20275;Dbxref=GenBank:WP_094915115.1;Name=WP_094915115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=CCO57_RS20275;product=acyl-CoA dehydrogenase;protein_id=WP_094915115.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 8331 9221 . - . ID=gene-CCO57_RS20280;Name=CCO57_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20280;old_locus_tag=CCO57_20260 NZ_NPMC01000016.1 Protein Homology CDS 8331 9221 . - 0 ID=cds-WP_000284832.1;Parent=gene-CCO57_RS20280;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=CCO57_RS20280;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 9684 10448 . + . ID=gene-CCO57_RS20285;Name=CCO57_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20285;old_locus_tag=CCO57_20265 NZ_NPMC01000016.1 Protein Homology CDS 9684 10448 . + 0 ID=cds-WP_094915116.1;Parent=gene-CCO57_RS20285;Dbxref=GenBank:WP_094915116.1;Name=WP_094915116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=CCO57_RS20285;product=electron transfer flavoprotein;protein_id=WP_094915116.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 10470 11405 . + . ID=gene-CCO57_RS20290;Name=CCO57_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20290;old_locus_tag=CCO57_20270 NZ_NPMC01000016.1 Protein Homology CDS 10470 11405 . + 0 ID=cds-WP_094915117.1;Parent=gene-CCO57_RS20290;Dbxref=GenBank:WP_094915117.1;Name=WP_094915117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=CCO57_RS20290;product=electron transfer flavoprotein subunit alpha;protein_id=WP_094915117.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 11462 12748 . + . ID=gene-CCO57_RS20295;Name=CCO57_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20295;old_locus_tag=CCO57_20275 NZ_NPMC01000016.1 Protein Homology CDS 11462 12748 . + 0 ID=cds-WP_001278549.1;Parent=gene-CCO57_RS20295;Dbxref=GenBank:WP_001278549.1;Name=WP_001278549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=CCO57_RS20295;product=FAD-dependent oxidoreductase;protein_id=WP_001278549.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 12745 13038 . + . ID=gene-CCO57_RS20300;Name=CCO57_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20300;old_locus_tag=CCO57_20280 NZ_NPMC01000016.1 Protein Homology CDS 12745 13038 . + 0 ID=cds-WP_000093364.1;Parent=gene-CCO57_RS20300;Dbxref=GenBank:WP_000093364.1;Name=WP_000093364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=CCO57_RS20300;product=ferredoxin family protein;protein_id=WP_000093364.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 13128 14768 . + . ID=gene-CCO57_RS20305;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=CCO57_RS20305;old_locus_tag=CCO57_20285 NZ_NPMC01000016.1 Protein Homology CDS 13128 14768 . + 0 ID=cds-WP_094915118.1;Parent=gene-CCO57_RS20305;Dbxref=GenBank:WP_094915118.1;Name=WP_094915118.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=CCO57_RS20305;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_094915118.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 14810 17188 . - . ID=gene-CCO57_RS20310;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=CCO57_RS20310;old_locus_tag=CCO57_20290 NZ_NPMC01000016.1 Protein Homology CDS 14810 17188 . - 0 ID=cds-WP_000069333.1;Parent=gene-CCO57_RS20310;Dbxref=GenBank:WP_000069333.1;Name=WP_000069333.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=CCO57_RS20310;product=phosphoenolpyruvate synthase;protein_id=WP_000069333.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 17525 18358 . + . ID=gene-CCO57_RS20315;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=CCO57_RS20315;old_locus_tag=CCO57_20295 NZ_NPMC01000016.1 Protein Homology CDS 17525 18358 . + 0 ID=cds-WP_000370992.1;Parent=gene-CCO57_RS20315;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=CCO57_RS20315;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 18514 19560 . + . ID=gene-CCO57_RS20320;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=CCO57_RS20320;old_locus_tag=CCO57_20300 NZ_NPMC01000016.1 Protein Homology CDS 18514 19560 . + 0 ID=cds-WP_001082196.1;Parent=gene-CCO57_RS20320;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=CCO57_RS20320;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 19717 19908 . + . ID=gene-CCO57_RS20325;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=CCO57_RS20325;old_locus_tag=CCO57_20305 NZ_NPMC01000016.1 Protein Homology CDS 19717 19908 . + 0 ID=cds-WP_000089115.1;Parent=gene-CCO57_RS20325;Dbxref=GenBank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=CCO57_RS20325;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 19943 21385 . - . ID=gene-CCO57_RS20330;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=CCO57_RS20330;old_locus_tag=CCO57_20310 NZ_NPMC01000016.1 Protein Homology CDS 19943 21385 . - 0 ID=cds-WP_094915119.1;Parent=gene-CCO57_RS20330;Dbxref=GenBank:WP_094915119.1;Name=WP_094915119.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=CCO57_RS20330;product=protein adenylyltransferase SelO;protein_id=WP_094915119.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 21447 22160 . - . ID=gene-CCO57_RS20335;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=CCO57_RS20335;old_locus_tag=CCO57_20315 NZ_NPMC01000016.1 Protein Homology CDS 21447 22160 . - 0 ID=cds-WP_000562005.1;Parent=gene-CCO57_RS20335;Dbxref=GenBank:WP_000562005.1;Name=WP_000562005.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=CCO57_RS20335;product=anti-FlhDC factor YdiV;protein_id=WP_000562005.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 22474 22938 . - . ID=gene-CCO57_RS20340;Name=CCO57_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20340;old_locus_tag=CCO57_20320 NZ_NPMC01000016.1 Protein Homology CDS 22474 22938 . - 0 ID=cds-WP_001213256.1;Parent=gene-CCO57_RS20340;Dbxref=GenBank:WP_001213256.1;Name=WP_001213256.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=CCO57_RS20340;product=C40 family peptidase;protein_id=WP_001213256.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 23015 23764 . - . ID=gene-CCO57_RS20345;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=CCO57_RS20345;old_locus_tag=CCO57_20325 NZ_NPMC01000016.1 Protein Homology CDS 23015 23764 . - 0 ID=cds-WP_080191696.1;Parent=gene-CCO57_RS20345;Dbxref=GenBank:WP_080191696.1;Name=WP_080191696.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=CCO57_RS20345;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_080191696.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 23764 24315 . - . ID=gene-CCO57_RS20350;Name=CCO57_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20350;old_locus_tag=CCO57_20330 NZ_NPMC01000016.1 Protein Homology CDS 23764 24315 . - 0 ID=cds-WP_001181570.1;Parent=gene-CCO57_RS20350;Dbxref=GenBank:WP_001181570.1;Name=WP_001181570.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=CCO57_RS20350;product=glutathione peroxidase;protein_id=WP_001181570.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 24407 25387 . - . ID=gene-CCO57_RS20355;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=CCO57_RS20355;old_locus_tag=CCO57_20335 NZ_NPMC01000016.1 Protein Homology CDS 24407 25387 . - 0 ID=cds-WP_000954977.1;Parent=gene-CCO57_RS20355;Dbxref=GenBank:WP_000954977.1;Name=WP_000954977.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=CCO57_RS20355;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954977.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 25590 25889 . - . ID=gene-CCO57_RS20360;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=CCO57_RS20360;old_locus_tag=CCO57_20340 NZ_NPMC01000016.1 Protein Homology CDS 25590 25889 . - 0 ID=cds-WP_001229266.1;Parent=gene-CCO57_RS20360;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=CCO57_RS20360;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 25894 28281 . - . ID=gene-CCO57_RS20365;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CCO57_RS20365;old_locus_tag=CCO57_20345 NZ_NPMC01000016.1 Protein Homology CDS 25894 28281 . - 0 ID=cds-WP_000672403.1;Parent=gene-CCO57_RS20365;Dbxref=GenBank:WP_000672403.1;Name=WP_000672403.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=CCO57_RS20365;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672403.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 28297 29280 . - . ID=gene-CCO57_RS20370;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CCO57_RS20370;old_locus_tag=CCO57_20350 NZ_NPMC01000016.1 Protein Homology CDS 28297 29280 . - 0 ID=cds-WP_094915120.1;Parent=gene-CCO57_RS20370;Dbxref=GenBank:WP_094915120.1;Name=WP_094915120.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=CCO57_RS20370;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_094915120.1;transl_table=11 NZ_NPMC01000016.1 cmsearch sequence_feature 29343 29466 . - . ID=id-NZ_NPMC01000016.1:29343..29466;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMC01000016.1 RefSeq gene 29417 29461 . - . ID=gene-CCO57_RS24210;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=CCO57_RS24210 NZ_NPMC01000016.1 Protein Homology CDS 29417 29461 . - 0 ID=cds-WP_001386830.1;Parent=gene-CCO57_RS24210;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=CCO57_RS24210;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 29582 29938 . - . ID=gene-CCO57_RS20375;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CCO57_RS20375;old_locus_tag=CCO57_20355 NZ_NPMC01000016.1 Protein Homology CDS 29582 29938 . - 0 ID=cds-WP_000124850.1;Parent=gene-CCO57_RS20375;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=CCO57_RS20375;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 29989 30186 . - . ID=gene-CCO57_RS20380;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CCO57_RS20380;old_locus_tag=CCO57_20360 NZ_NPMC01000016.1 Protein Homology CDS 29989 30186 . - 0 ID=cds-WP_001124225.1;Parent=gene-CCO57_RS20380;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=CCO57_RS20380;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 30282 30824 . - . ID=gene-CCO57_RS20385;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CCO57_RS20385;old_locus_tag=CCO57_20365 NZ_NPMC01000016.1 Protein Homology CDS 30282 30824 . - 0 ID=cds-WP_001574431.1;Parent=gene-CCO57_RS20385;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=CCO57_RS20385;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 30828 32756 . - . ID=gene-CCO57_RS20390;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CCO57_RS20390;old_locus_tag=CCO57_20370 NZ_NPMC01000016.1 Protein Homology CDS 30828 32756 . - 0 ID=cds-WP_001144212.1;Parent=gene-CCO57_RS20390;Dbxref=GenBank:WP_001144212.1;Name=WP_001144212.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=CCO57_RS20390;product=threonine--tRNA ligase;protein_id=WP_001144212.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 33016 33870 . - . ID=gene-CCO57_RS20400;Name=CCO57_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20400;old_locus_tag=CCO57_20380 NZ_NPMC01000016.1 Protein Homology CDS 33016 33870 . - 0 ID=cds-WP_001044093.1;Parent=gene-CCO57_RS20400;Dbxref=GenBank:WP_001044093.1;Name=WP_001044093.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=CCO57_RS20400;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044093.1;transl_table=11 NZ_NPMC01000016.1 RefSeq pseudogene 33867 34181 . - . ID=gene-CCO57_RS20405;Name=CCO57_RS20405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS20405;old_locus_tag=CCO57_20385;pseudo=true NZ_NPMC01000016.1 Protein Homology CDS 33867 34181 . - 0 ID=cds-CCO57_RS20405;Parent=gene-CCO57_RS20405;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=CCO57_RS20405;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 34324 35283 . + . ID=gene-CCO57_RS20410;Name=CCO57_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20410;old_locus_tag=CCO57_20390 NZ_NPMC01000016.1 Protein Homology CDS 34324 35283 . + 0 ID=cds-WP_001046434.1;Parent=gene-CCO57_RS20410;Dbxref=GenBank:WP_001046434.1;Name=WP_001046434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=CCO57_RS20410;product=lipid A deacylase LpxR family protein;protein_id=WP_001046434.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 35332 36090 . - . ID=gene-CCO57_RS20415;Name=CCO57_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20415;old_locus_tag=CCO57_20395 NZ_NPMC01000016.1 Protein Homology CDS 35332 36090 . - 0 ID=cds-WP_000770981.1;Parent=gene-CCO57_RS20415;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=CCO57_RS20415;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 36379 37311 . + . ID=gene-CCO57_RS20420;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO57_RS20420;old_locus_tag=CCO57_20400 NZ_NPMC01000016.1 Protein Homology CDS 36379 37311 . + 0 ID=cds-WP_000251707.1;Parent=gene-CCO57_RS20420;Dbxref=GenBank:WP_000251707.1;Name=WP_000251707.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=CCO57_RS20420;product=6-phosphofructokinase II;protein_id=WP_000251707.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 37408 37698 . + . ID=gene-CCO57_RS20425;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=CCO57_RS20425;old_locus_tag=CCO57_20405 NZ_NPMC01000016.1 Protein Homology CDS 37408 37698 . + 0 ID=cds-WP_053259074.1;Parent=gene-CCO57_RS20425;Dbxref=GenBank:WP_053259074.1;Name=WP_053259074.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=CCO57_RS20425;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_053259074.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 37805 38665 . + . ID=gene-CCO57_RS20430;Name=CCO57_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20430;old_locus_tag=CCO57_20410 NZ_NPMC01000016.1 Protein Homology CDS 37805 38665 . + 0 ID=cds-WP_000267686.1;Parent=gene-CCO57_RS20430;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=CCO57_RS20430;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 38708 39244 . - . ID=gene-CCO57_RS20435;Name=CCO57_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20435;old_locus_tag=CCO57_20415 NZ_NPMC01000016.1 Protein Homology CDS 38708 39244 . - 0 ID=cds-WP_000222158.1;Parent=gene-CCO57_RS20435;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=CCO57_RS20435;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 39393 40061 . + . ID=gene-CCO57_RS20440;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=CCO57_RS20440;old_locus_tag=CCO57_20420 NZ_NPMC01000016.1 Protein Homology CDS 39393 40061 . + 0 ID=cds-WP_001605625.1;Parent=gene-CCO57_RS20440;Dbxref=GenBank:WP_001605625.1;Name=WP_001605625.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=CCO57_RS20440;product=hexitol phosphatase HxpB;protein_id=WP_001605625.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 40199 40798 . + . ID=gene-CCO57_RS20445;Name=CCO57_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20445;old_locus_tag=CCO57_20425 NZ_NPMC01000016.1 Protein Homology CDS 40199 40798 . + 0 ID=cds-WP_000505804.1;Parent=gene-CCO57_RS20445;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=CCO57_RS20445;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 40935 42326 . + . ID=gene-CCO57_RS20450;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=CCO57_RS20450;old_locus_tag=CCO57_20430 NZ_NPMC01000016.1 Protein Homology CDS 40935 42326 . + 0 ID=cds-WP_001010662.1;Parent=gene-CCO57_RS20450;Dbxref=GenBank:WP_001010662.1;Name=WP_001010662.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=CCO57_RS20450;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010662.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 42428 42670 . - . ID=gene-CCO57_RS20455;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=CCO57_RS20455;old_locus_tag=CCO57_20435 NZ_NPMC01000016.1 Protein Homology CDS 42428 42670 . - 0 ID=cds-WP_000977512.1;Parent=gene-CCO57_RS20455;Dbxref=GenBank:WP_000977512.1;Name=WP_000977512.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=CCO57_RS20455;product=cell division activator CedA;protein_id=WP_000977512.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 42887 45139 . + . ID=gene-CCO57_RS20460;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=CCO57_RS20460;old_locus_tag=CCO57_20440 NZ_NPMC01000016.1 Protein Homology CDS 42887 45139 . + 0 ID=cds-WP_094915121.1;Parent=gene-CCO57_RS20460;Dbxref=GenBank:WP_094915121.1;Name=WP_094915121.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=CCO57_RS20460;product=catalase HPII;protein_id=WP_094915121.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 45183 45941 . - . ID=gene-CCO57_RS20465;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=CCO57_RS20465;old_locus_tag=CCO57_20445 NZ_NPMC01000016.1 Protein Homology CDS 45183 45941 . - 0 ID=cds-WP_000442743.1;Parent=gene-CCO57_RS20465;Dbxref=GenBank:WP_000442743.1;Name=WP_000442743.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=CCO57_RS20465;product=chitin disaccharide deacetylase;protein_id=WP_000442743.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 45954 47309 . - . ID=gene-CCO57_RS20470;Name=CCO57_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20470;old_locus_tag=CCO57_20450 NZ_NPMC01000016.1 Protein Homology CDS 45954 47309 . - 0 ID=cds-WP_094915122.1;Parent=gene-CCO57_RS20470;Dbxref=GenBank:WP_094915122.1;Name=WP_094915122.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=CCO57_RS20470;product=6-phospho-beta-glucosidase;protein_id=WP_094915122.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 47434 48276 . - . ID=gene-CCO57_RS20475;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=CCO57_RS20475;old_locus_tag=CCO57_20455 NZ_NPMC01000016.1 Protein Homology CDS 47434 48276 . - 0 ID=cds-WP_000983393.1;Parent=gene-CCO57_RS20475;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=CCO57_RS20475;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 48287 48634 . - . ID=gene-CCO57_RS20480;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=CCO57_RS20480;old_locus_tag=CCO57_20460 NZ_NPMC01000016.1 Protein Homology CDS 48287 48634 . - 0 ID=cds-WP_000459883.1;Parent=gene-CCO57_RS20480;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=CCO57_RS20480;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 48685 50043 . - . ID=gene-CCO57_RS20485;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=CCO57_RS20485;old_locus_tag=CCO57_20465 NZ_NPMC01000016.1 Protein Homology CDS 48685 50043 . - 0 ID=cds-WP_000073063.1;Parent=gene-CCO57_RS20485;Dbxref=GenBank:WP_000073063.1;Name=WP_000073063.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=CCO57_RS20485;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073063.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 50126 50446 . - . ID=gene-CCO57_RS20490;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=CCO57_RS20490;old_locus_tag=CCO57_20470 NZ_NPMC01000016.1 Protein Homology CDS 50126 50446 . - 0 ID=cds-WP_000412161.1;Parent=gene-CCO57_RS20490;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=CCO57_RS20490;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 50747 51088 . - . ID=gene-CCO57_RS20500;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=CCO57_RS20500;old_locus_tag=CCO57_20480 NZ_NPMC01000016.1 Protein Homology CDS 50747 51088 . - 0 ID=cds-WP_001039301.1;Parent=gene-CCO57_RS20500;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=CCO57_RS20500;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 51307 52134 . + . ID=gene-CCO57_RS20505;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CCO57_RS20505;old_locus_tag=CCO57_20485 NZ_NPMC01000016.1 Protein Homology CDS 51307 52134 . + 0 ID=cds-WP_000174982.1;Parent=gene-CCO57_RS20505;Dbxref=GenBank:WP_000174982.1;Name=WP_000174982.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=CCO57_RS20505;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174982.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 52255 53136 . + . ID=gene-CCO57_RS20510;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=CCO57_RS20510;old_locus_tag=CCO57_20490 NZ_NPMC01000016.1 Protein Homology CDS 52255 53136 . + 0 ID=cds-WP_001556068.1;Parent=gene-CCO57_RS20510;Dbxref=GenBank:WP_001556068.1;Name=WP_001556068.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=CCO57_RS20510;product=excinuclease Cho;protein_id=WP_001556068.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 53211 53696 . - . ID=gene-CCO57_RS20515;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=CCO57_RS20515;old_locus_tag=CCO57_20495 NZ_NPMC01000016.1 Protein Homology CDS 53211 53696 . - 0 ID=cds-WP_001228998.1;Parent=gene-CCO57_RS20515;Dbxref=GenBank:WP_001228998.1;Name=WP_001228998.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=CCO57_RS20515;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228998.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 54032 55000 . - . ID=gene-CCO57_RS20525;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=CCO57_RS20525;old_locus_tag=CCO57_20505 NZ_NPMC01000016.1 Protein Homology CDS 54032 55000 . - 0 ID=cds-WP_039513229.1;Parent=gene-CCO57_RS20525;Dbxref=GenBank:WP_039513229.1;Name=WP_039513229.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=CCO57_RS20525;product=succinylglutamate desuccinylase;protein_id=WP_039513229.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 54993 56336 . - . ID=gene-CCO57_RS20530;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=CCO57_RS20530;old_locus_tag=CCO57_20510 NZ_NPMC01000016.1 Protein Homology CDS 54993 56336 . - 0 ID=cds-WP_000123943.1;Parent=gene-CCO57_RS20530;Dbxref=GenBank:WP_000123943.1;Name=WP_000123943.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=CCO57_RS20530;product=N-succinylarginine dihydrolase;protein_id=WP_000123943.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 56333 57811 . - . ID=gene-CCO57_RS20535;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=CCO57_RS20535;old_locus_tag=CCO57_20515 NZ_NPMC01000016.1 Protein Homology CDS 56333 57811 . - 0 ID=cds-WP_000177264.1;Parent=gene-CCO57_RS20535;Dbxref=GenBank:WP_000177264.1;Name=WP_000177264.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=CCO57_RS20535;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177264.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 57808 58842 . - . ID=gene-CCO57_RS20540;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=CCO57_RS20540;old_locus_tag=CCO57_20520 NZ_NPMC01000016.1 Protein Homology CDS 57808 58842 . - 0 ID=cds-WP_001263885.1;Parent=gene-CCO57_RS20540;Dbxref=GenBank:WP_001263885.1;Name=WP_001263885.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=CCO57_RS20540;product=arginine N-succinyltransferase;protein_id=WP_001263885.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 58833 60059 . - . ID=gene-CCO57_RS20545;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=CCO57_RS20545;old_locus_tag=CCO57_20525 NZ_NPMC01000016.1 Protein Homology CDS 58833 60059 . - 0 ID=cds-WP_031565788.1;Parent=gene-CCO57_RS20545;Dbxref=GenBank:WP_031565788.1;Name=WP_031565788.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=CCO57_RS20545;product=succinylornithine/acetylornithine transaminase;protein_id=WP_031565788.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 60504 61310 . + . ID=gene-CCO57_RS20550;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=CCO57_RS20550;old_locus_tag=CCO57_20530 NZ_NPMC01000016.1 Protein Homology CDS 60504 61310 . + 0 ID=cds-WP_000673954.1;Parent=gene-CCO57_RS20550;Dbxref=GenBank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=CCO57_RS20550;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 61383 61799 . + . ID=gene-CCO57_RS20555;Name=CCO57_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20555;old_locus_tag=CCO57_20535 NZ_NPMC01000016.1 Protein Homology CDS 61383 61799 . + 0 ID=cds-WP_000592140.1;Parent=gene-CCO57_RS20555;Dbxref=GenBank:WP_000592140.1;Name=WP_000592140.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=CCO57_RS20555;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592140.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 61759 62034 . - . ID=gene-CCO57_RS20560;Name=CCO57_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20560;old_locus_tag=CCO57_20540 NZ_NPMC01000016.1 Protein Homology CDS 61759 62034 . - 0 ID=cds-WP_001254682.1;Parent=gene-CCO57_RS20560;Dbxref=GenBank:WP_001254682.1;Name=WP_001254682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=CCO57_RS20560;product=YnjH family protein;protein_id=WP_001254682.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 62273 63616 . + . ID=gene-CCO57_RS20565;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=CCO57_RS20565;old_locus_tag=CCO57_20545 NZ_NPMC01000016.1 Protein Homology CDS 62273 63616 . + 0 ID=cds-WP_000372865.1;Parent=gene-CCO57_RS20565;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=CCO57_RS20565;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 63646 65595 . - . ID=gene-CCO57_RS20570;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=CCO57_RS20570;old_locus_tag=CCO57_20550 NZ_NPMC01000016.1 Protein Homology CDS 63646 65595 . - 0 ID=cds-WP_094915123.1;Parent=gene-CCO57_RS20570;Dbxref=GenBank:WP_094915123.1;Name=WP_094915123.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=CCO57_RS20570;product=DNA topoisomerase III;protein_id=WP_094915123.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 65600 66643 . - . ID=gene-CCO57_RS20575;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=CCO57_RS20575;old_locus_tag=CCO57_20555 NZ_NPMC01000016.1 Protein Homology CDS 65600 66643 . - 0 ID=cds-WP_001294900.1;Parent=gene-CCO57_RS20575;Dbxref=GenBank:WP_001294900.1;Name=WP_001294900.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=CCO57_RS20575;product=selenide%2C water dikinase SelD;protein_id=WP_001294900.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 66761 67312 . - . ID=gene-CCO57_RS20585;Name=CCO57_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20585;old_locus_tag=CCO57_20565 NZ_NPMC01000016.1 Protein Homology CDS 66761 67312 . - 0 ID=cds-WP_000339305.1;Parent=gene-CCO57_RS20585;Dbxref=GenBank:WP_000339305.1;Name=WP_000339305.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=CCO57_RS20585;product=NAD(P)H nitroreductase;protein_id=WP_000339305.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 67486 69342 . + . ID=gene-CCO57_RS20595;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CCO57_RS20595;old_locus_tag=CCO57_20575 NZ_NPMC01000016.1 Protein Homology CDS 67486 69342 . + 0 ID=cds-WP_001259865.1;Parent=gene-CCO57_RS20595;Dbxref=GenBank:WP_001259865.1;Name=WP_001259865.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=CCO57_RS20595;product=signal peptide peptidase SppA;protein_id=WP_001259865.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 69438 70454 . + . ID=gene-CCO57_RS20600;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=CCO57_RS20600;old_locus_tag=CCO57_20580 NZ_NPMC01000016.1 Protein Homology CDS 69438 70454 . + 0 ID=cds-WP_001170134.1;Parent=gene-CCO57_RS20600;Dbxref=GenBank:WP_001170134.1;Name=WP_001170134.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=CCO57_RS20600;product=asparaginase;protein_id=WP_001170134.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 70481 71137 . + . ID=gene-CCO57_RS20605;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=CCO57_RS20605;old_locus_tag=CCO57_20585 NZ_NPMC01000016.1 Protein Homology CDS 70481 71137 . + 0 ID=cds-WP_000184707.1;Parent=gene-CCO57_RS20605;Dbxref=GenBank:WP_000184707.1;Name=WP_000184707.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=CCO57_RS20605;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184707.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 71489 71767 . - . ID=gene-CCO57_RS20610;Name=CCO57_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20610;old_locus_tag=CCO57_20590 NZ_NPMC01000016.1 Protein Homology CDS 71489 71767 . - 0 ID=cds-WP_001046864.1;Parent=gene-CCO57_RS20610;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=CCO57_RS20610;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 71809 72222 . - . ID=gene-CCO57_RS20615;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CCO57_RS20615;old_locus_tag=CCO57_20595 NZ_NPMC01000016.1 Protein Homology CDS 71809 72222 . - 0 ID=cds-WP_001519539.1;Parent=gene-CCO57_RS20615;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=CCO57_RS20615;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 72564 73559 . + . ID=gene-CCO57_RS20620;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=CCO57_RS20620;old_locus_tag=CCO57_20600 NZ_NPMC01000016.1 Protein Homology CDS 72564 73559 . + 0 ID=cds-WP_000153505.1;Parent=gene-CCO57_RS20620;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=CCO57_RS20620;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 73888 74772 . + . ID=gene-CCO57_RS20630;Name=CCO57_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20630;old_locus_tag=CCO57_20610 NZ_NPMC01000016.1 Protein Homology CDS 73888 74772 . + 0 ID=cds-WP_000608654.1;Parent=gene-CCO57_RS20630;Dbxref=GenBank:WP_000608654.1;Name=WP_000608654.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=CCO57_RS20630;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608654.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 74871 75728 . - . ID=gene-CCO57_RS20635;Name=CCO57_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20635;old_locus_tag=CCO57_20615 NZ_NPMC01000016.1 Protein Homology CDS 74871 75728 . - 0 ID=cds-WP_072156673.1;Parent=gene-CCO57_RS20635;Dbxref=GenBank:WP_072156673.1;Name=WP_072156673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=CCO57_RS20635;product=aldo/keto reductase;protein_id=WP_072156673.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 75825 77021 . - . ID=gene-CCO57_RS20640;Name=CCO57_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20640;old_locus_tag=CCO57_20620 NZ_NPMC01000016.1 Protein Homology CDS 75825 77021 . - 0 ID=cds-WP_000029250.1;Parent=gene-CCO57_RS20640;Dbxref=GenBank:WP_000029250.1;Name=WP_000029250.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=CCO57_RS20640;product=anaerobic sulfatase maturase;protein_id=WP_000029250.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 77311 78057 . - . ID=gene-CCO57_RS20645;Name=CCO57_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20645;old_locus_tag=CCO57_20625 NZ_NPMC01000016.1 Protein Homology CDS 77311 78057 . - 0 ID=cds-WP_000163762.1;Parent=gene-CCO57_RS20645;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=CCO57_RS20645;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11 NZ_NPMC01000016.1 RefSeq gene 78907 79456 . - . ID=gene-CCO57_RS20655;Name=CCO57_RS20655;end_range=79456,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20655;old_locus_tag=CCO57_20635;partial=true NZ_NPMC01000016.1 Protein Homology CDS 78907 79456 . - 1 ID=cds-WP_140428179.1;Parent=gene-CCO57_RS20655;Dbxref=GenBank:WP_140428179.1;Name=WP_140428179.1;Ontology_term=GO:0004803;end_range=79456,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=CCO57_RS20655;partial=true;product=IS3 family transposase;protein_id=WP_140428179.1;transl_table=11 ##sequence-region NZ_NPMC01000017.1 1 77647 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000017.1 RefSeq region 1 77647 . + . ID=NZ_NPMC01000017.1:1..77647;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000017.1 RefSeq gene 1 571 . - . ID=gene-CCO57_RS20660;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO57_RS20660;old_locus_tag=CCO57_20640;partial=true;start_range=.,1 NZ_NPMC01000017.1 Protein Homology CDS 1 571 . - 0 ID=cds-WP_094915128.1;Parent=gene-CCO57_RS20660;Dbxref=GenBank:WP_094915128.1;Name=WP_094915128.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=CCO57_RS20660;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_094915128.1;start_range=.,1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 577 1977 . - . ID=gene-CCO57_RS20665;Name=CCO57_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20665;old_locus_tag=CCO57_20645 NZ_NPMC01000017.1 Protein Homology CDS 577 1977 . - 0 ID=cds-WP_000724469.1;Parent=gene-CCO57_RS20665;Dbxref=GenBank:WP_000724469.1;Name=WP_000724469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=CCO57_RS20665;product=cytochrome-c peroxidase;protein_id=WP_000724469.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 2167 2799 . - . ID=gene-CCO57_RS20670;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=CCO57_RS20670;old_locus_tag=CCO57_20650 NZ_NPMC01000017.1 Protein Homology CDS 2167 2799 . - 0 ID=cds-WP_000595421.1;Parent=gene-CCO57_RS20670;Dbxref=GenBank:WP_000595421.1;Name=WP_000595421.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=CCO57_RS20670;product=molecular chaperone TorD;protein_id=WP_000595421.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 2792 5344 . - . ID=gene-CCO57_RS20675;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=CCO57_RS20675;old_locus_tag=CCO57_20655 NZ_NPMC01000017.1 Protein Homology CDS 2792 5344 . - 0 ID=cds-WP_023208228.1;Parent=gene-CCO57_RS20675;Dbxref=GenBank:WP_023208228.1;Name=WP_023208228.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=CCO57_RS20675;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_023208228.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 5334 6518 . - . ID=gene-CCO57_RS20680;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=CCO57_RS20680;old_locus_tag=CCO57_20660 NZ_NPMC01000017.1 Protein Homology CDS 5334 6518 . - 0 ID=cds-WP_001230254.1;Parent=gene-CCO57_RS20680;Dbxref=GenBank:WP_001230254.1;Name=WP_001230254.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=CCO57_RS20680;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230254.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 6648 7340 . + . ID=gene-CCO57_RS20685;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=CCO57_RS20685;old_locus_tag=CCO57_20665 NZ_NPMC01000017.1 Protein Homology CDS 6648 7340 . + 0 ID=cds-WP_001562512.1;Parent=gene-CCO57_RS20685;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=CCO57_RS20685;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 7313 8353 . - . ID=gene-CCO57_RS20690;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=CCO57_RS20690;old_locus_tag=CCO57_20670 NZ_NPMC01000017.1 Protein Homology CDS 7313 8353 . - 0 ID=cds-WP_023208229.1;Parent=gene-CCO57_RS20690;Dbxref=GenBank:WP_023208229.1;Name=WP_023208229.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=CCO57_RS20690;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_023208229.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 8433 11168 . + . ID=gene-CCO57_RS20695;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=CCO57_RS20695;old_locus_tag=CCO57_20675 NZ_NPMC01000017.1 Protein Homology CDS 8433 11168 . + 0 ID=cds-WP_023214831.1;Parent=gene-CCO57_RS20695;Dbxref=GenBank:WP_023214831.1;Name=WP_023214831.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=CCO57_RS20695;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_023214831.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 11194 12531 . - . ID=gene-CCO57_RS20700;Name=CCO57_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20700;old_locus_tag=CCO57_20680 NZ_NPMC01000017.1 Protein Homology CDS 11194 12531 . - 0 ID=cds-WP_000253524.1;Parent=gene-CCO57_RS20700;Dbxref=GenBank:WP_000253524.1;Name=WP_000253524.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=CCO57_RS20700;product=MFS transporter;protein_id=WP_000253524.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 12616 13764 . - . ID=gene-CCO57_RS20705;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=CCO57_RS20705;old_locus_tag=CCO57_20685 NZ_NPMC01000017.1 Protein Homology CDS 12616 13764 . - 0 ID=cds-WP_000704735.1;Parent=gene-CCO57_RS20705;Dbxref=GenBank:WP_000704735.1;Name=WP_000704735.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=CCO57_RS20705;product=galactonate dehydratase;protein_id=WP_000704735.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 13761 14378 . - . ID=gene-CCO57_RS20710;Name=CCO57_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20710;old_locus_tag=CCO57_20690 NZ_NPMC01000017.1 Protein Homology CDS 13761 14378 . - 0 ID=cds-WP_001636174.1;Parent=gene-CCO57_RS20710;Dbxref=GenBank:WP_001636174.1;Name=WP_001636174.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=CCO57_RS20710;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001636174.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 14362 15240 . - . ID=gene-CCO57_RS20715;Name=CCO57_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20715;old_locus_tag=CCO57_20695 NZ_NPMC01000017.1 Protein Homology CDS 14362 15240 . - 0 ID=cds-WP_001533869.1;Parent=gene-CCO57_RS20715;Dbxref=GenBank:WP_001533869.1;Name=WP_001533869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=CCO57_RS20715;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_001533869.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 15237 15926 . - . ID=gene-CCO57_RS20720;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=CCO57_RS20720;old_locus_tag=CCO57_20700 NZ_NPMC01000017.1 Protein Homology CDS 15237 15926 . - 0 ID=cds-WP_000174317.1;Parent=gene-CCO57_RS20720;Dbxref=GenBank:WP_000174317.1;Name=WP_000174317.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=CCO57_RS20720;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174317.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 16187 17032 . - . ID=gene-CCO57_RS20725;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=CCO57_RS20725;old_locus_tag=CCO57_20705 NZ_NPMC01000017.1 Protein Homology CDS 16187 17032 . - 0 ID=cds-WP_000985570.1;Parent=gene-CCO57_RS20725;Dbxref=GenBank:WP_000985570.1;Name=WP_000985570.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=CCO57_RS20725;product=sugar-phosphatase;protein_id=WP_000985570.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 17338 18600 . + . ID=gene-CCO57_RS20730;Name=CCO57_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20730;old_locus_tag=CCO57_20710 NZ_NPMC01000017.1 Protein Homology CDS 17338 18600 . + 0 ID=cds-WP_000061262.1;Parent=gene-CCO57_RS20730;Dbxref=GenBank:WP_000061262.1;Name=WP_000061262.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=CCO57_RS20730;product=MFS transporter;protein_id=WP_000061262.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 18614 19807 . + . ID=gene-CCO57_RS20735;Name=CCO57_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20735;old_locus_tag=CCO57_20715 NZ_NPMC01000017.1 Protein Homology CDS 18614 19807 . + 0 ID=cds-WP_023197151.1;Parent=gene-CCO57_RS20735;Dbxref=GenBank:WP_023197151.1;Name=WP_023197151.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=CCO57_RS20735;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_023197151.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 19922 20818 . + . ID=gene-CCO57_RS20740;Name=CCO57_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20740;old_locus_tag=CCO57_20720 NZ_NPMC01000017.1 Protein Homology CDS 19922 20818 . + 0 ID=cds-WP_001054589.1;Parent=gene-CCO57_RS20740;Dbxref=GenBank:WP_001054589.1;Name=WP_001054589.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=CCO57_RS20740;product=LysR family transcriptional regulator;protein_id=WP_001054589.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 20837 23251 . - . ID=gene-CCO57_RS20745;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CCO57_RS20745;old_locus_tag=CCO57_20725 NZ_NPMC01000017.1 Protein Homology CDS 20837 23251 . - 0 ID=cds-WP_000072047.1;Parent=gene-CCO57_RS20745;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=CCO57_RS20745;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 23280 24353 . - . ID=gene-CCO57_RS20750;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CCO57_RS20750;old_locus_tag=CCO57_20730 NZ_NPMC01000017.1 Protein Homology CDS 23280 24353 . - 0 ID=cds-WP_000059373.1;Parent=gene-CCO57_RS20750;Dbxref=GenBank:WP_000059373.1;Name=WP_000059373.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=CCO57_RS20750;product=DNA replication/repair protein RecF;protein_id=WP_000059373.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 24551 25651 . - . ID=gene-CCO57_RS20755;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CCO57_RS20755;old_locus_tag=CCO57_20735 NZ_NPMC01000017.1 Protein Homology CDS 24551 25651 . - 0 ID=cds-WP_000673474.1;Parent=gene-CCO57_RS20755;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=CCO57_RS20755;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 25656 27056 . - . ID=gene-CCO57_RS20760;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CCO57_RS20760;old_locus_tag=CCO57_20740 NZ_NPMC01000017.1 Protein Homology CDS 25656 27056 . - 0 ID=cds-WP_000059093.1;Parent=gene-CCO57_RS20760;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=CCO57_RS20760;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 27396 27488 . + . ID=gene-CCO57_RS25040;Name=CCO57_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS25040 NZ_NPMC01000017.1 Protein Homology CDS 27396 27488 . + 0 ID=cds-WP_418142141.1;Parent=gene-CCO57_RS25040;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=CCO57_RS25040;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 27717 27857 . + . ID=gene-CCO57_RS20765;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CCO57_RS20765;old_locus_tag=CCO57_20745 NZ_NPMC01000017.1 Protein Homology CDS 27717 27857 . + 0 ID=cds-WP_000831330.1;Parent=gene-CCO57_RS20765;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=CCO57_RS20765;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 27874 28233 . + . ID=gene-CCO57_RS20770;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CCO57_RS20770;old_locus_tag=CCO57_20750 NZ_NPMC01000017.1 Protein Homology CDS 27874 28233 . + 0 ID=cds-WP_000239725.1;Parent=gene-CCO57_RS20770;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=CCO57_RS20770;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 28197 28454 . + . ID=gene-CCO57_RS20775;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CCO57_RS20775;old_locus_tag=CCO57_20755 NZ_NPMC01000017.1 Protein Homology CDS 28197 28454 . + 0 ID=cds-WP_001307474.1;Parent=gene-CCO57_RS20775;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=CCO57_RS20775;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 28457 30103 . + . ID=gene-CCO57_RS20780;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CCO57_RS20780;old_locus_tag=CCO57_20760 NZ_NPMC01000017.1 Protein Homology CDS 28457 30103 . + 0 ID=cds-WP_023212299.1;Parent=gene-CCO57_RS20780;Dbxref=GenBank:WP_023212299.1;Name=WP_023212299.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=CCO57_RS20780;product=membrane protein insertase YidC;protein_id=WP_023212299.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 30245 31609 . + . ID=gene-CCO57_RS20785;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CCO57_RS20785;old_locus_tag=CCO57_20765 NZ_NPMC01000017.1 Protein Homology CDS 30245 31609 . + 0 ID=cds-WP_001528140.1;Parent=gene-CCO57_RS20785;Dbxref=GenBank:WP_001528140.1;Name=WP_001528140.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=CCO57_RS20785;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001528140.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 31792 32979 . + . ID=gene-CCO57_RS20790;Name=CCO57_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20790;old_locus_tag=CCO57_20770 NZ_NPMC01000017.1 Protein Homology CDS 31792 32979 . + 0 ID=cds-WP_000819610.1;Parent=gene-CCO57_RS20790;Dbxref=GenBank:WP_000819610.1;Name=WP_000819610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608974.1;locus_tag=CCO57_RS20790;product=MFS transporter;protein_id=WP_000819610.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 32948 33907 . + . ID=gene-CCO57_RS20795;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=CCO57_RS20795;old_locus_tag=CCO57_20775 NZ_NPMC01000017.1 Protein Homology CDS 32948 33907 . + 0 ID=cds-WP_000749365.1;Parent=gene-CCO57_RS20795;Dbxref=GenBank:WP_000749365.1;Name=WP_000749365.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=CCO57_RS20795;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749365.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 34065 34820 . + . ID=gene-CCO57_RS20800;Name=CCO57_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20800;old_locus_tag=CCO57_20780 NZ_NPMC01000017.1 Protein Homology CDS 34065 34820 . + 0 ID=cds-WP_094915124.1;Parent=gene-CCO57_RS20800;Dbxref=GenBank:WP_094915124.1;Name=WP_094915124.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=CCO57_RS20800;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_094915124.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 34820 35404 . + . ID=gene-CCO57_RS20805;Name=CCO57_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20805;old_locus_tag=CCO57_20785 NZ_NPMC01000017.1 Protein Homology CDS 34820 35404 . + 0 ID=cds-WP_001608976.1;Parent=gene-CCO57_RS20805;Dbxref=GenBank:WP_001608976.1;Name=WP_001608976.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=CCO57_RS20805;product=NADPH-dependent FMN reductase;protein_id=WP_001608976.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 35449 36786 . - . ID=gene-CCO57_RS20810;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=CCO57_RS20810;old_locus_tag=CCO57_20790 NZ_NPMC01000017.1 Protein Homology CDS 35449 36786 . - 0 ID=cds-WP_140428180.1;Parent=gene-CCO57_RS20810;Dbxref=GenBank:WP_140428180.1;Name=WP_140428180.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=CCO57_RS20810;product=adenine permease AdeP;protein_id=WP_140428180.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 36955 37620 . + . ID=gene-CCO57_RS20815;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=CCO57_RS20815;old_locus_tag=CCO57_20795 NZ_NPMC01000017.1 Protein Homology CDS 36955 37620 . + 0 ID=cds-WP_094915126.1;Parent=gene-CCO57_RS20815;Dbxref=GenBank:WP_094915126.1;Name=WP_094915126.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=CCO57_RS20815;product=6-phosphogluconate phosphatase;protein_id=WP_094915126.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 37715 38440 . - . ID=gene-CCO57_RS20820;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CCO57_RS20820;old_locus_tag=CCO57_20800 NZ_NPMC01000017.1 Protein Homology CDS 37715 38440 . - 0 ID=cds-WP_000377800.1;Parent=gene-CCO57_RS20820;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=CCO57_RS20820;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 38455 39228 . - . ID=gene-CCO57_RS20825;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CCO57_RS20825;old_locus_tag=CCO57_20805 NZ_NPMC01000017.1 Protein Homology CDS 38455 39228 . - 0 ID=cds-WP_000063118.1;Parent=gene-CCO57_RS20825;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=CCO57_RS20825;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 39315 40205 . - . ID=gene-CCO57_RS20830;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CCO57_RS20830;old_locus_tag=CCO57_20810 NZ_NPMC01000017.1 Protein Homology CDS 39315 40205 . - 0 ID=cds-WP_000212199.1;Parent=gene-CCO57_RS20830;Dbxref=GenBank:WP_000212199.1;Name=WP_000212199.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=CCO57_RS20830;product=phosphate ABC transporter permease PstA;protein_id=WP_000212199.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 40205 41164 . - . ID=gene-CCO57_RS20835;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CCO57_RS20835;old_locus_tag=CCO57_20815 NZ_NPMC01000017.1 Protein Homology CDS 40205 41164 . - 0 ID=cds-WP_000741630.1;Parent=gene-CCO57_RS20835;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=CCO57_RS20835;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 41301 42341 . - . ID=gene-CCO57_RS20840;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=CCO57_RS20840;old_locus_tag=CCO57_20820 NZ_NPMC01000017.1 Protein Homology CDS 41301 42341 . - 0 ID=cds-WP_000867131.1;Parent=gene-CCO57_RS20840;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=CCO57_RS20840;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 42507 43880 . - . ID=gene-CCO57_RS20845;Name=CCO57_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20845;old_locus_tag=CCO57_20825 NZ_NPMC01000017.1 Protein Homology CDS 42507 43880 . - 0 ID=cds-WP_000162542.1;Parent=gene-CCO57_RS20845;Dbxref=GenBank:WP_000162542.1;Name=WP_000162542.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=CCO57_RS20845;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_000162542.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 43930 44748 . - . ID=gene-CCO57_RS20850;Name=CCO57_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20850;old_locus_tag=CCO57_20830 NZ_NPMC01000017.1 Protein Homology CDS 43930 44748 . - 0 ID=cds-WP_000166709.1;Parent=gene-CCO57_RS20850;Dbxref=GenBank:WP_000166709.1;Name=WP_000166709.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=CCO57_RS20850;product=shikimate 5-dehydrogenase;protein_id=WP_000166709.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 44843 46600 . + . ID=gene-CCO57_RS20855;Name=CCO57_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20855;old_locus_tag=CCO57_20835 NZ_NPMC01000017.1 Protein Homology CDS 44843 46600 . + 0 ID=cds-WP_000213169.1;Parent=gene-CCO57_RS20855;Dbxref=GenBank:WP_000213169.1;Name=WP_000213169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=CCO57_RS20855;product=SgrR family transcriptional regulator;protein_id=WP_000213169.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 46751 48580 . - . ID=gene-CCO57_RS20860;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CCO57_RS20860;old_locus_tag=CCO57_20840 NZ_NPMC01000017.1 Protein Homology CDS 46751 48580 . - 0 ID=cds-WP_000334059.1;Parent=gene-CCO57_RS20860;Dbxref=GenBank:WP_000334059.1;Name=WP_000334059.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=CCO57_RS20860;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334059.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 48769 50139 . - . ID=gene-CCO57_RS20865;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CCO57_RS20865;old_locus_tag=CCO57_20845 NZ_NPMC01000017.1 Protein Homology CDS 48769 50139 . - 0 ID=cds-WP_023136904.1;Parent=gene-CCO57_RS20865;Dbxref=GenBank:WP_023136904.1;Name=WP_023136904.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=CCO57_RS20865;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_023136904.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 50460 51158 . - . ID=gene-CCO57_RS20875;Name=CCO57_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20875;old_locus_tag=CCO57_20855 NZ_NPMC01000017.1 Protein Homology CDS 50460 51158 . - 0 ID=cds-WP_000009908.1;Parent=gene-CCO57_RS20875;Dbxref=GenBank:WP_000009908.1;Name=WP_000009908.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=CCO57_RS20875;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009908.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 51388 51807 . - . ID=gene-CCO57_RS20880;Name=CCO57_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS20880;old_locus_tag=CCO57_20860 NZ_NPMC01000017.1 Protein Homology CDS 51388 51807 . - 0 ID=cds-WP_001251971.1;Parent=gene-CCO57_RS20880;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=CCO57_RS20880;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 51828 53210 . - . ID=gene-CCO57_RS20885;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CCO57_RS20885;old_locus_tag=CCO57_20865 NZ_NPMC01000017.1 Protein Homology CDS 51828 53210 . - 0 ID=cds-WP_000190499.1;Parent=gene-CCO57_RS20885;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=CCO57_RS20885;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 53237 54100 . - . ID=gene-CCO57_RS20890;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CCO57_RS20890;old_locus_tag=CCO57_20870 NZ_NPMC01000017.1 Protein Homology CDS 53237 54100 . - 0 ID=cds-WP_000896506.1;Parent=gene-CCO57_RS20890;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=CCO57_RS20890;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 54151 55692 . - . ID=gene-CCO57_RS20895;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CCO57_RS20895;old_locus_tag=CCO57_20875 NZ_NPMC01000017.1 Protein Homology CDS 54151 55692 . - 0 ID=cds-WP_001176751.1;Parent=gene-CCO57_RS20895;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=CCO57_RS20895;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 55705 56238 . - . ID=gene-CCO57_RS20900;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=CCO57_RS20900;old_locus_tag=CCO57_20880 NZ_NPMC01000017.1 Protein Homology CDS 55705 56238 . - 0 ID=cds-WP_001288957.1;Parent=gene-CCO57_RS20900;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=CCO57_RS20900;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 56253 56723 . - . ID=gene-CCO57_RS20905;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=CCO57_RS20905;old_locus_tag=CCO57_20885 NZ_NPMC01000017.1 Protein Homology CDS 56253 56723 . - 0 ID=cds-WP_001052212.1;Parent=gene-CCO57_RS20905;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=CCO57_RS20905;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 56783 57022 . - . ID=gene-CCO57_RS20910;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CCO57_RS20910;old_locus_tag=CCO57_20890 NZ_NPMC01000017.1 Protein Homology CDS 56783 57022 . - 0 ID=cds-WP_000429386.1;Parent=gene-CCO57_RS20910;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=CCO57_RS20910;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 57069 57884 . - . ID=gene-CCO57_RS20915;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CCO57_RS20915;old_locus_tag=CCO57_20895 NZ_NPMC01000017.1 Protein Homology CDS 57069 57884 . - 0 ID=cds-WP_000135632.1;Parent=gene-CCO57_RS20915;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=CCO57_RS20915;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 57893 58273 . - . ID=gene-CCO57_RS20920;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=CCO57_RS20920;old_locus_tag=CCO57_20900 NZ_NPMC01000017.1 Protein Homology CDS 57893 58273 . - 0 ID=cds-WP_000116685.1;Parent=gene-CCO57_RS20920;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=CCO57_RS20920;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 58889 59512 . - . ID=gene-CCO57_RS20925;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CCO57_RS20925;old_locus_tag=CCO57_20905 NZ_NPMC01000017.1 Protein Homology CDS 58889 59512 . - 0 ID=cds-WP_001528235.1;Parent=gene-CCO57_RS20925;Dbxref=GenBank:WP_001528235.1;Name=WP_001528235.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=CCO57_RS20925;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001528235.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 59615 61504 . - . ID=gene-CCO57_RS20930;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CCO57_RS20930;old_locus_tag=CCO57_20910 NZ_NPMC01000017.1 Protein Homology CDS 59615 61504 . - 0 ID=cds-WP_000499872.1;Parent=gene-CCO57_RS20930;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=CCO57_RS20930;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 61883 62326 . - . ID=gene-CCO57_RS20935;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=CCO57_RS20935;old_locus_tag=CCO57_20915 NZ_NPMC01000017.1 Protein Homology CDS 61883 62326 . - 0 ID=cds-WP_001518982.1;Parent=gene-CCO57_RS20935;Dbxref=GenBank:WP_001518982.1;Name=WP_001518982.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=CCO57_RS20935;product=FMN-binding protein MioC;protein_id=WP_001518982.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 62416 62874 . - . ID=gene-CCO57_RS20940;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=CCO57_RS20940;old_locus_tag=CCO57_20920 NZ_NPMC01000017.1 Protein Homology CDS 62416 62874 . - 0 ID=cds-WP_000433016.1;Parent=gene-CCO57_RS20940;Dbxref=GenBank:WP_000433016.1;Name=WP_000433016.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=CCO57_RS20940;product=transcriptional regulator AsnC;protein_id=WP_000433016.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 63025 64017 . + . ID=gene-CCO57_RS20945;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=CCO57_RS20945;old_locus_tag=CCO57_20925 NZ_NPMC01000017.1 Protein Homology CDS 63025 64017 . + 0 ID=cds-WP_000845120.1;Parent=gene-CCO57_RS20945;Dbxref=GenBank:WP_000845120.1;Name=WP_000845120.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=CCO57_RS20945;product=aspartate--ammonia ligase;protein_id=WP_000845120.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 64022 65473 . - . ID=gene-CCO57_RS20950;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=CCO57_RS20950;old_locus_tag=CCO57_20930 NZ_NPMC01000017.1 Protein Homology CDS 64022 65473 . - 0 ID=cds-WP_000956585.1;Parent=gene-CCO57_RS20950;Dbxref=GenBank:WP_000956585.1;Name=WP_000956585.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=CCO57_RS20950;product=ATPase RavA stimulator ViaA;protein_id=WP_000956585.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 65467 66963 . - . ID=gene-CCO57_RS20955;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=CCO57_RS20955;old_locus_tag=CCO57_20935 NZ_NPMC01000017.1 Protein Homology CDS 65467 66963 . - 0 ID=cds-WP_094915127.1;Parent=gene-CCO57_RS20955;Dbxref=GenBank:WP_094915127.1;Name=WP_094915127.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=CCO57_RS20955;product=ATPase RavA;protein_id=WP_094915127.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 67312 69180 . + . ID=gene-CCO57_RS20960;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=CCO57_RS20960;old_locus_tag=CCO57_20940 NZ_NPMC01000017.1 Protein Homology CDS 67312 69180 . + 0 ID=cds-WP_000102338.1;Parent=gene-CCO57_RS20960;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=CCO57_RS20960;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 69397 69816 . + . ID=gene-CCO57_RS20965;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CCO57_RS20965;old_locus_tag=CCO57_20945 NZ_NPMC01000017.1 Protein Homology CDS 69397 69816 . + 0 ID=cds-WP_000715944.1;Parent=gene-CCO57_RS20965;Dbxref=GenBank:WP_000715944.1;Name=WP_000715944.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=CCO57_RS20965;product=D-ribose pyranase;protein_id=WP_000715944.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 69824 71329 . + . ID=gene-CCO57_RS20970;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=CCO57_RS20970;old_locus_tag=CCO57_20950 NZ_NPMC01000017.1 Protein Homology CDS 69824 71329 . + 0 ID=cds-WP_094888724.1;Parent=gene-CCO57_RS20970;Dbxref=GenBank:WP_094888724.1;Name=WP_094888724.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=CCO57_RS20970;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_094888724.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 71335 72300 . + . ID=gene-CCO57_RS20975;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=CCO57_RS20975;old_locus_tag=CCO57_20955 NZ_NPMC01000017.1 Protein Homology CDS 71335 72300 . + 0 ID=cds-WP_000211345.1;Parent=gene-CCO57_RS20975;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=CCO57_RS20975;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 72325 73215 . + . ID=gene-CCO57_RS20980;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=CCO57_RS20980;old_locus_tag=CCO57_20960 NZ_NPMC01000017.1 Protein Homology CDS 72325 73215 . + 0 ID=cds-WP_001056260.1;Parent=gene-CCO57_RS20980;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=CCO57_RS20980;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 73348 74277 . + . ID=gene-CCO57_RS20985;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO57_RS20985;old_locus_tag=CCO57_20965 NZ_NPMC01000017.1 Protein Homology CDS 73348 74277 . + 0 ID=cds-WP_000844733.1;Parent=gene-CCO57_RS20985;Dbxref=GenBank:WP_000844733.1;Name=WP_000844733.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=CCO57_RS20985;product=ribokinase;protein_id=WP_000844733.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 74281 75279 . + . ID=gene-CCO57_RS20990;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=CCO57_RS20990;old_locus_tag=CCO57_20970 NZ_NPMC01000017.1 Protein Homology CDS 74281 75279 . + 0 ID=cds-WP_000224487.1;Parent=gene-CCO57_RS20990;Dbxref=GenBank:WP_000224487.1;Name=WP_000224487.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=CCO57_RS20990;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224487.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 75245 76672 . - . ID=gene-CCO57_RS20995;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=CCO57_RS20995;old_locus_tag=CCO57_20975 NZ_NPMC01000017.1 Protein Homology CDS 75245 76672 . - 0 ID=cds-WP_000202071.1;Parent=gene-CCO57_RS20995;Dbxref=GenBank:WP_000202071.1;Name=WP_000202071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=CCO57_RS20995;product=multidrug transporter subunit MdtD;protein_id=WP_000202071.1;transl_table=11 NZ_NPMC01000017.1 RefSeq gene 76684 77388 . - . ID=gene-CCO57_RS21000;Name=CCO57_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21000;old_locus_tag=CCO57_20980 NZ_NPMC01000017.1 Protein Homology CDS 76684 77388 . - 0 ID=cds-WP_001131144.1;Parent=gene-CCO57_RS21000;Dbxref=GenBank:WP_001131144.1;Name=WP_001131144.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=CCO57_RS21000;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131144.1;transl_table=11 ##sequence-region NZ_NPMC01000018.1 1 77540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000018.1 RefSeq region 1 77540 . + . ID=NZ_NPMC01000018.1:1..77540;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000018.1 RefSeq gene 139 2025 . - . ID=gene-CCO57_RS21005;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=CCO57_RS21005;old_locus_tag=CCO57_20985 NZ_NPMC01000018.1 Protein Homology CDS 139 2025 . - 0 ID=cds-WP_000010227.1;Parent=gene-CCO57_RS21005;Dbxref=GenBank:WP_000010227.1;Name=WP_000010227.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=CCO57_RS21005;product=propionate--CoA ligase;protein_id=WP_000010227.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 2066 3517 . - . ID=gene-CCO57_RS21010;Name=CCO57_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21010;old_locus_tag=CCO57_20990 NZ_NPMC01000018.1 Protein Homology CDS 2066 3517 . - 0 ID=cds-WP_000107081.1;Parent=gene-CCO57_RS21010;Dbxref=GenBank:WP_000107081.1;Name=WP_000107081.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=CCO57_RS21010;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_000107081.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 3557 4726 . - . ID=gene-CCO57_RS21015;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=CCO57_RS21015;old_locus_tag=CCO57_20995 NZ_NPMC01000018.1 Protein Homology CDS 3557 4726 . - 0 ID=cds-WP_001285878.1;Parent=gene-CCO57_RS21015;Dbxref=GenBank:WP_001285878.1;Name=WP_001285878.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=CCO57_RS21015;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285878.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 4837 5724 . - . ID=gene-CCO57_RS21020;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=CCO57_RS21020;old_locus_tag=CCO57_21000 NZ_NPMC01000018.1 Protein Homology CDS 4837 5724 . - 0 ID=cds-WP_000052223.1;Parent=gene-CCO57_RS21020;Dbxref=GenBank:WP_000052223.1;Name=WP_000052223.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=CCO57_RS21020;product=methylisocitrate lyase;protein_id=WP_000052223.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 5990 7615 . + . ID=gene-CCO57_RS21025;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=CCO57_RS21025;old_locus_tag=CCO57_21005 NZ_NPMC01000018.1 Protein Homology CDS 5990 7615 . + 0 ID=cds-WP_000205284.1;Parent=gene-CCO57_RS21025;Dbxref=GenBank:WP_000205284.1;Name=WP_000205284.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=CCO57_RS21025;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000205284.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 7751 8026 . - . ID=gene-CCO57_RS21030;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=CCO57_RS21030;old_locus_tag=CCO57_21010 NZ_NPMC01000018.1 Protein Homology CDS 7751 8026 . - 0 ID=cds-WP_000848026.1;Parent=gene-CCO57_RS21030;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=CCO57_RS21030;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 8258 8890 . + . ID=gene-CCO57_RS21035;Name=CCO57_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21035;old_locus_tag=CCO57_21015 NZ_NPMC01000018.1 Protein Homology CDS 8258 8890 . + 0 ID=cds-WP_000433131.1;Parent=gene-CCO57_RS21035;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=CCO57_RS21035;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 8931 11039 . - . ID=gene-CCO57_RS21040;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=CCO57_RS21040;old_locus_tag=CCO57_21020 NZ_NPMC01000018.1 Protein Homology CDS 8931 11039 . - 0 ID=cds-WP_001127745.1;Parent=gene-CCO57_RS21040;Dbxref=GenBank:WP_001127745.1;Name=WP_001127745.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=CCO57_RS21040;product=ferrioxamine B receptor FoxA;protein_id=WP_001127745.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 11185 12189 . - . ID=gene-CCO57_RS21045;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=CCO57_RS21045;old_locus_tag=CCO57_21025 NZ_NPMC01000018.1 Protein Homology CDS 11185 12189 . - 0 ID=cds-WP_094915129.1;Parent=gene-CCO57_RS21045;Dbxref=GenBank:WP_094915129.1;Name=WP_094915129.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=CCO57_RS21045;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_094915129.1;transl_table=11 NZ_NPMC01000018.1 RefSeq pseudogene 12285 12477 . - . ID=gene-CCO57_RS24700;Name=CCO57_RS24700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24700;pseudo=true NZ_NPMC01000018.1 Protein Homology CDS 12285 12477 . - 0 ID=cds-CCO57_RS24700;Parent=gene-CCO57_RS24700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=CCO57_RS24700;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 12396 12581 . - . ID=gene-CCO57_RS24855;Name=CCO57_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24855;old_locus_tag=CCO57_21030 NZ_NPMC01000018.1 Protein Homology CDS 12396 12581 . - 0 ID=cds-WP_305954967.1;Parent=gene-CCO57_RS24855;Dbxref=GenBank:WP_305954967.1;Name=WP_305954967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=CCO57_RS24855;product=DUF2474 domain-containing protein;protein_id=WP_305954967.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 12527 13537 . - . ID=gene-CCO57_RS21055;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO57_RS21055;old_locus_tag=CCO57_21035 NZ_NPMC01000018.1 Protein Homology CDS 12527 13537 . - 0 ID=cds-WP_000151047.1;Parent=gene-CCO57_RS21055;Dbxref=GenBank:WP_000151047.1;Name=WP_000151047.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=CCO57_RS21055;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151047.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 13534 14937 . - . ID=gene-CCO57_RS21060;Name=CCO57_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21060;old_locus_tag=CCO57_21040 NZ_NPMC01000018.1 Protein Homology CDS 13534 14937 . - 0 ID=cds-WP_094915130.1;Parent=gene-CCO57_RS21060;Dbxref=GenBank:WP_094915130.1;Name=WP_094915130.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=CCO57_RS21060;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_094915130.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 15054 15155 . - . ID=gene-CCO57_RS21065;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=CCO57_RS21065;old_locus_tag=CCO57_21045 NZ_NPMC01000018.1 Protein Homology CDS 15054 15155 . - 0 ID=cds-WP_000934834.1;Parent=gene-CCO57_RS21065;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=CCO57_RS21065;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 15431 18400 . - . ID=gene-CCO57_RS21070;Name=CCO57_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21070;old_locus_tag=CCO57_21050 NZ_NPMC01000018.1 Protein Homology CDS 15431 18400 . - 0 ID=cds-WP_094915131.1;Parent=gene-CCO57_RS21070;Dbxref=GenBank:WP_094915131.1;Name=WP_094915131.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001023572.1;locus_tag=CCO57_RS21070;product=type III restriction-modification system endonuclease;protein_id=WP_094915131.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 18413 20371 . - . ID=gene-CCO57_RS21075;Name=CCO57_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21075;old_locus_tag=CCO57_21055 NZ_NPMC01000018.1 Protein Homology CDS 18413 20371 . - 0 ID=cds-WP_094915132.1;Parent=gene-CCO57_RS21075;Dbxref=GenBank:WP_094915132.1;Name=WP_094915132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=CCO57_RS21075;product=site-specific DNA-methyltransferase;protein_id=WP_094915132.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 20560 21813 . - . ID=gene-CCO57_RS21080;Name=CCO57_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21080;old_locus_tag=CCO57_21060 NZ_NPMC01000018.1 Protein Homology CDS 20560 21813 . - 0 ID=cds-WP_000288502.1;Parent=gene-CCO57_RS21080;Dbxref=GenBank:WP_000288502.1;Name=WP_000288502.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=CCO57_RS21080;product=MFS transporter;protein_id=WP_000288502.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 22105 22299 . - . ID=gene-CCO57_RS21085;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=CCO57_RS21085;old_locus_tag=CCO57_21065 NZ_NPMC01000018.1 Protein Homology CDS 22105 22299 . - 0 ID=cds-WP_001159470.1;Parent=gene-CCO57_RS21085;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=CCO57_RS21085;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 22377 22841 . - . ID=gene-CCO57_RS21090;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=CCO57_RS21090;old_locus_tag=CCO57_21070 NZ_NPMC01000018.1 Protein Homology CDS 22377 22841 . - 0 ID=cds-WP_001020583.1;Parent=gene-CCO57_RS21090;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=CCO57_RS21090;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 22853 25141 . - . ID=gene-CCO57_RS21095;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=CCO57_RS21095;old_locus_tag=CCO57_21075 NZ_NPMC01000018.1 Protein Homology CDS 22853 25141 . - 0 ID=cds-WP_000083315.1;Parent=gene-CCO57_RS21095;Dbxref=GenBank:WP_000083315.1;Name=WP_000083315.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=CCO57_RS21095;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_000083315.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 25418 26644 . + . ID=gene-CCO57_RS21100;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=CCO57_RS21100;old_locus_tag=CCO57_21080 NZ_NPMC01000018.1 Protein Homology CDS 25418 26644 . + 0 ID=cds-WP_001254860.1;Parent=gene-CCO57_RS21100;Dbxref=GenBank:WP_001254860.1;Name=WP_001254860.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=CCO57_RS21100;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_001254860.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 26641 29808 . + . ID=gene-CCO57_RS21105;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=CCO57_RS21105;old_locus_tag=CCO57_21085 NZ_NPMC01000018.1 Protein Homology CDS 26641 29808 . + 0 ID=cds-WP_000673148.1;Parent=gene-CCO57_RS21105;Dbxref=GenBank:WP_000673148.1;Name=WP_000673148.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=CCO57_RS21105;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_000673148.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 29825 31282 . + . ID=gene-CCO57_RS21110;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=CCO57_RS21110;old_locus_tag=CCO57_21090 NZ_NPMC01000018.1 Protein Homology CDS 29825 31282 . + 0 ID=cds-WP_001543180.1;Parent=gene-CCO57_RS21110;Dbxref=GenBank:WP_001543180.1;Name=WP_001543180.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=CCO57_RS21110;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_001543180.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 31352 31711 . - . ID=gene-CCO57_RS21115;Name=CCO57_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21115;old_locus_tag=CCO57_21095 NZ_NPMC01000018.1 Protein Homology CDS 31352 31711 . - 0 ID=cds-WP_000722978.1;Parent=gene-CCO57_RS21115;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=CCO57_RS21115;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 31769 31993 . - . ID=gene-CCO57_RS21120;Name=CCO57_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21120;old_locus_tag=CCO57_21100 NZ_NPMC01000018.1 Protein Homology CDS 31769 31993 . - 0 ID=cds-WP_094915133.1;Parent=gene-CCO57_RS21120;Dbxref=GenBank:WP_094915133.1;Name=WP_094915133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=CCO57_RS21120;product=hypothetical protein;protein_id=WP_094915133.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 32004 32645 . - . ID=gene-CCO57_RS21125;Name=CCO57_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21125;old_locus_tag=CCO57_21105 NZ_NPMC01000018.1 Protein Homology CDS 32004 32645 . - 0 ID=cds-WP_000610824.1;Parent=gene-CCO57_RS21125;Dbxref=GenBank:WP_000610824.1;Name=WP_000610824.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=CCO57_RS21125;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610824.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 32789 33313 . - . ID=gene-CCO57_RS21130;Name=CCO57_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21130;old_locus_tag=CCO57_21110 NZ_NPMC01000018.1 Protein Homology CDS 32789 33313 . - 0 ID=cds-WP_000830237.1;Parent=gene-CCO57_RS21130;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=CCO57_RS21130;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 33715 34203 . - . ID=gene-CCO57_RS21135;Name=CCO57_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21135;old_locus_tag=CCO57_21115 NZ_NPMC01000018.1 Protein Homology CDS 33715 34203 . - 0 ID=cds-WP_000545418.1;Parent=gene-CCO57_RS21135;Dbxref=GenBank:WP_000545418.1;Name=WP_000545418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=CCO57_RS21135;product=hypothetical protein;protein_id=WP_000545418.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 34176 34919 . - . ID=gene-CCO57_RS21140;Name=CCO57_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21140;old_locus_tag=CCO57_21120 NZ_NPMC01000018.1 Protein Homology CDS 34176 34919 . - 0 ID=cds-WP_001527382.1;Parent=gene-CCO57_RS21140;Dbxref=GenBank:WP_001527382.1;Name=WP_001527382.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=CCO57_RS21140;product=transcriptional regulator;protein_id=WP_001527382.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 35019 36593 . - . ID=gene-CCO57_RS21145;Name=CCO57_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21145;old_locus_tag=CCO57_21125 NZ_NPMC01000018.1 Protein Homology CDS 35019 36593 . - 0 ID=cds-WP_094915134.1;Parent=gene-CCO57_RS21145;Dbxref=GenBank:WP_094915134.1;Name=WP_094915134.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=CCO57_RS21145;product=EAL domain-containing protein;protein_id=WP_094915134.1;transl_table=11 NZ_NPMC01000018.1 RefSeq pseudogene 37095 37395 . - . ID=gene-CCO57_RS21155;Name=CCO57_RS21155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21155;old_locus_tag=CCO57_21135;pseudo=true NZ_NPMC01000018.1 Protein Homology CDS 37095 37395 . - 0 ID=cds-CCO57_RS21155;Parent=gene-CCO57_RS21155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=CCO57_RS21155;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 37368 38102 . - . ID=gene-CCO57_RS21160;Name=CCO57_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21160;old_locus_tag=CCO57_21140 NZ_NPMC01000018.1 Protein Homology CDS 37368 38102 . - 0 ID=cds-WP_001005861.1;Parent=gene-CCO57_RS21160;Dbxref=GenBank:WP_001005861.1;Name=WP_001005861.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=CCO57_RS21160;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001005861.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 38765 39301 . + . ID=gene-CCO57_RS21170;Name=CCO57_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21170;old_locus_tag=CCO57_21150 NZ_NPMC01000018.1 Protein Homology CDS 38765 39301 . + 0 ID=cds-WP_023208147.1;Parent=gene-CCO57_RS21170;Dbxref=GenBank:WP_023208147.1;Name=WP_023208147.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=CCO57_RS21170;product=fimbrial protein;protein_id=WP_023208147.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 39363 40124 . + . ID=gene-CCO57_RS21175;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=CCO57_RS21175;old_locus_tag=CCO57_21155 NZ_NPMC01000018.1 Protein Homology CDS 39363 40124 . + 0 ID=cds-WP_023208148.1;Parent=gene-CCO57_RS21175;Dbxref=GenBank:WP_023208148.1;Name=WP_023208148.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=CCO57_RS21175;product=fimbrial biogenesis chaperone StbB;protein_id=WP_023208148.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 40108 42669 . + . ID=gene-CCO57_RS21180;Name=CCO57_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21180;old_locus_tag=CCO57_21160 NZ_NPMC01000018.1 Protein Homology CDS 40108 42669 . + 0 ID=cds-WP_094915135.1;Parent=gene-CCO57_RS21180;Dbxref=GenBank:WP_094915135.1;Name=WP_094915135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=CCO57_RS21180;product=fimbrial outer membrane usher protein;protein_id=WP_094915135.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 42674 43999 . + . ID=gene-CCO57_RS21185;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=CCO57_RS21185;old_locus_tag=CCO57_21165 NZ_NPMC01000018.1 Protein Homology CDS 42674 43999 . + 0 ID=cds-WP_000899091.1;Parent=gene-CCO57_RS21185;Dbxref=GenBank:WP_000899091.1;Name=WP_000899091.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO57_RS21185;product=fimbrial usher protein StbD;protein_id=WP_000899091.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 43965 44723 . + . ID=gene-CCO57_RS21190;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=CCO57_RS21190;old_locus_tag=CCO57_21170 NZ_NPMC01000018.1 Protein Homology CDS 43965 44723 . + 0 ID=cds-WP_001247023.1;Parent=gene-CCO57_RS21190;Dbxref=GenBank:WP_001247023.1;Name=WP_001247023.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=CCO57_RS21190;product=fimbrial biogenesis chaperone StbE;protein_id=WP_001247023.1;transl_table=11 NZ_NPMC01000018.1 RefSeq pseudogene 44771 44992 . - . ID=gene-CCO57_RS21195;Name=CCO57_RS21195;end_range=44992,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21195;old_locus_tag=CCO57_21175;partial=true;pseudo=true NZ_NPMC01000018.1 Protein Homology CDS 44771 44992 . - 0 ID=cds-CCO57_RS21195;Parent=gene-CCO57_RS21195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=44992,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=CCO57_RS21195;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 45385 46941 . - . ID=gene-CCO57_RS21200;Name=CCO57_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21200;old_locus_tag=CCO57_21180 NZ_NPMC01000018.1 Protein Homology CDS 45385 46941 . - 0 ID=cds-WP_006762600.1;Parent=gene-CCO57_RS21200;Dbxref=GenBank:WP_006762600.1;Name=WP_006762600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762600.1;locus_tag=CCO57_RS21200;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_006762600.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 47452 47724 . - . ID=gene-CCO57_RS21205;Name=CCO57_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21205;old_locus_tag=CCO57_21185 NZ_NPMC01000018.1 Protein Homology CDS 47452 47724 . - 0 ID=cds-WP_000783295.1;Parent=gene-CCO57_RS21205;Dbxref=GenBank:WP_000783295.1;Name=WP_000783295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783295.1;locus_tag=CCO57_RS21205;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000783295.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 48007 50694 . - . ID=gene-CCO57_RS21210;Name=CCO57_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21210;old_locus_tag=CCO57_21190 NZ_NPMC01000018.1 Protein Homology CDS 48007 50694 . - 0 ID=cds-WP_061377238.1;Parent=gene-CCO57_RS21210;Dbxref=GenBank:WP_061377238.1;Name=WP_061377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857086.1;locus_tag=CCO57_RS21210;product=DUF927 domain-containing protein;protein_id=WP_061377238.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 50691 51101 . - . ID=gene-CCO57_RS21215;Name=CCO57_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21215;old_locus_tag=CCO57_21195 NZ_NPMC01000018.1 Protein Homology CDS 50691 51101 . - 0 ID=cds-WP_001063903.1;Parent=gene-CCO57_RS21215;Dbxref=GenBank:WP_001063903.1;Name=WP_001063903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063902.1;locus_tag=CCO57_RS21215;product=hypothetical protein;protein_id=WP_001063903.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 51094 51330 . - . ID=gene-CCO57_RS21220;Name=CCO57_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21220;old_locus_tag=CCO57_21200 NZ_NPMC01000018.1 Protein Homology CDS 51094 51330 . - 0 ID=cds-WP_000839712.1;Parent=gene-CCO57_RS21220;Dbxref=GenBank:WP_000839712.1;Name=WP_000839712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525099.1;locus_tag=CCO57_RS21220;product=hypothetical protein;protein_id=WP_000839712.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 51327 51899 . - . ID=gene-CCO57_RS21225;Name=CCO57_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21225;old_locus_tag=CCO57_21205 NZ_NPMC01000018.1 Protein Homology CDS 51327 51899 . - 0 ID=cds-WP_024140129.1;Parent=gene-CCO57_RS21225;Dbxref=GenBank:WP_024140129.1;Name=WP_024140129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001111089.1;locus_tag=CCO57_RS21225;product=host cell division inhibitor Icd-like protein;protein_id=WP_024140129.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 51987 52991 . - . ID=gene-CCO57_RS21230;Name=CCO57_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21230;old_locus_tag=CCO57_21210 NZ_NPMC01000018.1 Protein Homology CDS 51987 52991 . - 0 ID=cds-WP_006762596.1;Parent=gene-CCO57_RS21230;Dbxref=GenBank:WP_006762596.1;Name=WP_006762596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762596.1;locus_tag=CCO57_RS21230;product=P2 family phage major capsid protein;protein_id=WP_006762596.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 53014 53886 . - . ID=gene-CCO57_RS21235;Name=CCO57_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21235;old_locus_tag=CCO57_21215 NZ_NPMC01000018.1 Protein Homology CDS 53014 53886 . - 0 ID=cds-WP_023209378.1;Parent=gene-CCO57_RS21235;Dbxref=GenBank:WP_023209378.1;Name=WP_023209378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109536.1;locus_tag=CCO57_RS21235;product=hypothetical protein;protein_id=WP_023209378.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 53923 54123 . - . ID=gene-CCO57_RS21240;Name=CCO57_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21240;old_locus_tag=CCO57_21220 NZ_NPMC01000018.1 Protein Homology CDS 53923 54123 . - 0 ID=cds-WP_000507057.1;Parent=gene-CCO57_RS21240;Dbxref=GenBank:WP_000507057.1;Name=WP_000507057.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000507057.1;locus_tag=CCO57_RS21240;product=helix-turn-helix transcriptional regulator;protein_id=WP_000507057.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 54231 55019 . - . ID=gene-CCO57_RS21245;Name=CCO57_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21245;old_locus_tag=CCO57_21225 NZ_NPMC01000018.1 Protein Homology CDS 54231 55019 . - 0 ID=cds-WP_006762594.1;Parent=gene-CCO57_RS21245;Dbxref=GenBank:WP_006762594.1;Name=WP_006762594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151879.1;locus_tag=CCO57_RS21245;product=hypothetical protein;protein_id=WP_006762594.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 55023 56204 . - . ID=gene-CCO57_RS21250;Name=CCO57_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21250;old_locus_tag=CCO57_21230 NZ_NPMC01000018.1 Protein Homology CDS 55023 56204 . - 0 ID=cds-WP_006762593.1;Parent=gene-CCO57_RS21250;Dbxref=GenBank:WP_006762593.1;Name=WP_006762593.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762593.1;locus_tag=CCO57_RS21250;product=tyrosine-type recombinase/integrase;protein_id=WP_006762593.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 56369 56444 . - . ID=gene-CCO57_RS21255;Name=CCO57_RS21255;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS21255;old_locus_tag=CCO57_21235 NZ_NPMC01000018.1 tRNAscan-SE tRNA 56369 56444 . - . ID=rna-CCO57_RS21255;Parent=gene-CCO57_RS21255;anticodon=(pos:complement(56409..56411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS21255;product=tRNA-Thr NZ_NPMC01000018.1 tRNAscan-SE exon 56369 56444 . - . ID=exon-CCO57_RS21255-1;Parent=rna-CCO57_RS21255;anticodon=(pos:complement(56409..56411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS21255;product=tRNA-Thr NZ_NPMC01000018.1 RefSeq gene 56560 57810 . - . ID=gene-CCO57_RS21260;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=CCO57_RS21260;old_locus_tag=CCO57_21240 NZ_NPMC01000018.1 Protein Homology CDS 56560 57810 . - 0 ID=cds-WP_001728790.1;Parent=gene-CCO57_RS21260;Dbxref=GenBank:WP_001728790.1;Name=WP_001728790.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=CCO57_RS21260;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_001728790.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 57822 58925 . - . ID=gene-CCO57_RS21265;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=CCO57_RS21265;old_locus_tag=CCO57_21245 NZ_NPMC01000018.1 Protein Homology CDS 57822 58925 . - 0 ID=cds-WP_001285275.1;Parent=gene-CCO57_RS21265;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=CCO57_RS21265;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 59208 60260 . + . ID=gene-CCO57_RS21270;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=CCO57_RS21270;old_locus_tag=CCO57_21250 NZ_NPMC01000018.1 Protein Homology CDS 59208 60260 . + 0 ID=cds-WP_001043672.1;Parent=gene-CCO57_RS21270;Dbxref=GenBank:WP_001043672.1;Name=WP_001043672.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=CCO57_RS21270;product=phosphoporin PhoE;protein_id=WP_001043672.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 60311 60712 . - . ID=gene-CCO57_RS21275;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=CCO57_RS21275;old_locus_tag=CCO57_21255 NZ_NPMC01000018.1 Protein Homology CDS 60311 60712 . - 0 ID=cds-WP_000174693.1;Parent=gene-CCO57_RS21275;Dbxref=GenBank:WP_000174693.1;Name=WP_000174693.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=CCO57_RS21275;product=sigma factor-binding protein Crl;protein_id=WP_000174693.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 60770 62014 . - . ID=gene-CCO57_RS21280;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=CCO57_RS21280;old_locus_tag=CCO57_21260 NZ_NPMC01000018.1 Protein Homology CDS 60770 62014 . - 0 ID=cds-WP_000189586.1;Parent=gene-CCO57_RS21280;Dbxref=GenBank:WP_000189586.1;Name=WP_000189586.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=CCO57_RS21280;product=esterase FrsA;protein_id=WP_000189586.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 62103 62561 . - . ID=gene-CCO57_RS21285;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=CCO57_RS21285;old_locus_tag=CCO57_21265 NZ_NPMC01000018.1 Protein Homology CDS 62103 62561 . - 0 ID=cds-WP_001292018.1;Parent=gene-CCO57_RS21285;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=CCO57_RS21285;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 62810 64267 . + . ID=gene-CCO57_RS21290;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=CCO57_RS21290;old_locus_tag=CCO57_21270 NZ_NPMC01000018.1 Protein Homology CDS 62810 64267 . + 0 ID=cds-WP_001292981.1;Parent=gene-CCO57_RS21290;Dbxref=GenBank:WP_001292981.1;Name=WP_001292981.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=CCO57_RS21290;product=cytosol nonspecific dipeptidase;protein_id=WP_001292981.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 64423 65037 . - . ID=gene-CCO57_RS21295;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=CCO57_RS21295;old_locus_tag=CCO57_21275 NZ_NPMC01000018.1 Protein Homology CDS 64423 65037 . - 0 ID=cds-WP_000602087.1;Parent=gene-CCO57_RS21295;Dbxref=GenBank:WP_000602087.1;Name=WP_000602087.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=CCO57_RS21295;product=peptide chain release factor H;protein_id=WP_000602087.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 65034 66173 . - . ID=gene-CCO57_RS21300;Name=CCO57_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21300;old_locus_tag=CCO57_21280 NZ_NPMC01000018.1 Protein Homology CDS 65034 66173 . - 0 ID=cds-WP_000528904.1;Parent=gene-CCO57_RS21300;Dbxref=GenBank:WP_000528904.1;Name=WP_000528904.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=CCO57_RS21300;product=RNA ligase RtcB family protein;protein_id=WP_000528904.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 66392 67447 . - . ID=gene-CCO57_RS21305;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CCO57_RS21305;old_locus_tag=CCO57_21285 NZ_NPMC01000018.1 Protein Homology CDS 66392 67447 . - 0 ID=cds-WP_001226199.1;Parent=gene-CCO57_RS21305;Dbxref=GenBank:WP_001226199.1;Name=WP_001226199.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=CCO57_RS21305;product=DNA polymerase IV;protein_id=WP_001226199.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 67697 68437 . + . ID=gene-CCO57_RS21310;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=CCO57_RS21310;old_locus_tag=CCO57_21290 NZ_NPMC01000018.1 Protein Homology CDS 67697 68437 . + 0 ID=cds-WP_001225658.1;Parent=gene-CCO57_RS21310;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=CCO57_RS21310;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 68408 69175 . - . ID=gene-CCO57_RS21315;Name=CCO57_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21315;old_locus_tag=CCO57_21295 NZ_NPMC01000018.1 Protein Homology CDS 68408 69175 . - 0 ID=cds-WP_000333387.1;Parent=gene-CCO57_RS21315;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=CCO57_RS21315;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 69388 69966 . - . ID=gene-CCO57_RS21320;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=CCO57_RS21320;old_locus_tag=CCO57_21300 NZ_NPMC01000018.1 Protein Homology CDS 69388 69966 . - 0 ID=cds-WP_000284051.1;Parent=gene-CCO57_RS21320;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=CCO57_RS21320;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 70206 72650 . + . ID=gene-CCO57_RS21325;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CCO57_RS21325;old_locus_tag=CCO57_21305 NZ_NPMC01000018.1 Protein Homology CDS 70206 72650 . + 0 ID=cds-WP_000973041.1;Parent=gene-CCO57_RS21325;Dbxref=GenBank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=CCO57_RS21325;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 72759 73526 . + . ID=gene-CCO57_RS21330;Name=CCO57_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21330;old_locus_tag=CCO57_21310 NZ_NPMC01000018.1 Protein Homology CDS 72759 73526 . + 0 ID=cds-WP_000015789.1;Parent=gene-CCO57_RS21330;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=CCO57_RS21330;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 73836 74243 . + . ID=gene-CCO57_RS21340;Name=CCO57_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21340;old_locus_tag=CCO57_21320 NZ_NPMC01000018.1 Protein Homology CDS 73836 74243 . + 0 ID=cds-WP_000788200.1;Parent=gene-CCO57_RS21340;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=CCO57_RS21340;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 74589 75308 . + . ID=gene-CCO57_RS21345;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=CCO57_RS21345;old_locus_tag=CCO57_21325 NZ_NPMC01000018.1 Protein Homology CDS 74589 75308 . + 0 ID=cds-WP_000787605.1;Parent=gene-CCO57_RS21345;Dbxref=GenBank:WP_000787605.1;Name=WP_000787605.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=CCO57_RS21345;product=adhesin/invasin protein PagN;protein_id=WP_000787605.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 75315 75500 . - . ID=gene-CCO57_RS21350;Name=CCO57_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21350;old_locus_tag=CCO57_21330 NZ_NPMC01000018.1 Protein Homology CDS 75315 75500 . - 0 ID=cds-WP_031602079.1;Parent=gene-CCO57_RS21350;Dbxref=GenBank:WP_031602079.1;Name=WP_031602079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543323.1;locus_tag=CCO57_RS21350;product=hypothetical protein;protein_id=WP_031602079.1;transl_table=11 NZ_NPMC01000018.1 RefSeq pseudogene 75557 75669 . + . ID=gene-CCO57_RS24405;Name=CCO57_RS24405;end_range=75669,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24405;partial=true;pseudo=true;start_range=.,75557 NZ_NPMC01000018.1 Protein Homology CDS 75557 75669 . + 0 ID=cds-CCO57_RS24405;Parent=gene-CCO57_RS24405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=75669,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=CCO57_RS24405;partial=true;product=hypothetical protein;pseudo=true;start_range=.,75557;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 76272 76889 . - . ID=gene-CCO57_RS21360;Name=tioA;gbkey=Gene;gene=tioA;gene_biotype=protein_coding;locus_tag=CCO57_RS21360;old_locus_tag=CCO57_21340 NZ_NPMC01000018.1 Protein Homology CDS 76272 76889 . - 0 ID=cds-WP_000241747.1;Parent=gene-CCO57_RS21360;Dbxref=GenBank:WP_000241747.1;Name=WP_000241747.1;gbkey=CDS;gene=tioA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241754.1;locus_tag=CCO57_RS21360;product=protein TioA;protein_id=WP_000241747.1;transl_table=11 NZ_NPMC01000018.1 RefSeq gene 77029 77484 . - . ID=gene-CCO57_RS21365;Name=tinR;gbkey=Gene;gene=tinR;gene_biotype=protein_coding;locus_tag=CCO57_RS21365;old_locus_tag=CCO57_21345 NZ_NPMC01000018.1 Protein Homology CDS 77029 77484 . - 0 ID=cds-WP_000141547.1;Parent=gene-CCO57_RS21365;Dbxref=GenBank:WP_000141547.1;Name=WP_000141547.1;gbkey=CDS;gene=tinR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219490.1;locus_tag=CCO57_RS21365;product=Lrp/AsnC family transcriptional regulator TinR;protein_id=WP_000141547.1;transl_table=11 ##sequence-region NZ_NPMC01000019.1 1 68017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000019.1 RefSeq region 1 68017 . + . ID=NZ_NPMC01000019.1:1..68017;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000019.1 RefSeq pseudogene 1 127 . + . ID=gene-CCO57_RS21370;Name=CCO57_RS21370;end_range=127,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21370;old_locus_tag=CCO57_21350;partial=true;pseudo=true;start_range=.,1 NZ_NPMC01000019.1 Protein Homology CDS 1 127 . + 1 ID=cds-CCO57_RS21370;Parent=gene-CCO57_RS21370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=127,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO57_RS21370;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 108 278 . + . ID=gene-CCO57_RS25045;Name=CCO57_RS25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS25045;old_locus_tag=CCO57_21355 NZ_NPMC01000019.1 Protein Homology CDS 108 278 . + 0 ID=cds-WP_094915136.1;Parent=gene-CCO57_RS25045;Dbxref=GenBank:WP_094915136.1;Name=WP_094915136.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022631.6;locus_tag=CCO57_RS25045;product=hypothetical protein;protein_id=WP_094915136.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 1657 2538 . - . ID=gene-CCO57_RS21395;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=CCO57_RS21395;old_locus_tag=CCO57_21375 NZ_NPMC01000019.1 Protein Homology CDS 1657 2538 . - 0 ID=cds-WP_094888759.1;Parent=gene-CCO57_RS21395;Dbxref=GenBank:WP_094888759.1;Name=WP_094888759.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490498.3;locus_tag=CCO57_RS21395;product=incFII family plasmid replication initiator RepA;protein_id=WP_094888759.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 2519 2596 . - . ID=gene-CCO57_RS21400;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=CCO57_RS21400;old_locus_tag=CCO57_21380 NZ_NPMC01000019.1 Protein Homology CDS 2519 2596 . - 0 ID=cds-WP_001541552.1;Parent=gene-CCO57_RS21400;Dbxref=GenBank:WP_001541552.1;Name=WP_001541552.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490497.1;locus_tag=CCO57_RS21400;product=RepA leader peptide Tap;protein_id=WP_001541552.1;transl_table=11 NZ_NPMC01000019.1 RefSeq pseudogene 2685 2807 . + . ID=gene-CCO57_RS24860;Name=CCO57_RS24860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24860;pseudo=true NZ_NPMC01000019.1 Protein Homology CDS 2685 2807 . + 0 ID=cds-CCO57_RS24860;Parent=gene-CCO57_RS24860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001345828.1;locus_tag=CCO57_RS24860;product=replication protein RepA;pseudo=true;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 2846 3091 . - . ID=gene-CCO57_RS21410;Name=CCO57_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21410;old_locus_tag=CCO57_21390 NZ_NPMC01000019.1 Protein Homology CDS 2846 3091 . - 0 ID=cds-WP_000078116.1;Parent=gene-CCO57_RS21410;Dbxref=GenBank:WP_000078116.1;Name=WP_000078116.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078117.1;locus_tag=CCO57_RS21410;product=replication regulatory protein RepA;protein_id=WP_000078116.1;transl_table=11 NZ_NPMC01000019.1 RefSeq pseudogene 3221 3750 . - . ID=gene-CCO57_RS25050;Name=CCO57_RS25050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25050;old_locus_tag=CCO57_21395;pseudo=true NZ_NPMC01000019.1 Protein Homology CDS 3221 3750 . - 0 ID=cds-CCO57_RS25050;Parent=gene-CCO57_RS25050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194258.1;locus_tag=CCO57_RS25050;product=phospholipase D family protein;pseudo=true;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 3965 4696 . - . ID=gene-CCO57_RS21425;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=CCO57_RS21425;old_locus_tag=CCO57_21405 NZ_NPMC01000019.1 Protein Homology CDS 3965 4696 . - 0 ID=cds-WP_094915137.1;Parent=gene-CCO57_RS21425;Dbxref=GenBank:WP_094915137.1;Name=WP_094915137.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455316.1;locus_tag=CCO57_RS21425;product=type-F conjugative transfer system pilin acetylase TraX;protein_id=WP_094915137.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 4693 5259 . - . ID=gene-CCO57_RS21430;Name=CCO57_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21430;old_locus_tag=CCO57_21410 NZ_NPMC01000019.1 Protein Homology CDS 4693 5259 . - 0 ID=cds-WP_094915138.1;Parent=gene-CCO57_RS21430;Dbxref=GenBank:WP_094915138.1;Name=WP_094915138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493830.1;locus_tag=CCO57_RS21430;product=DUF2726 domain-containing protein;protein_id=WP_094915138.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 5278 10557 . - . ID=gene-CCO57_RS21435;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=CCO57_RS21435;old_locus_tag=CCO57_21415 NZ_NPMC01000019.1 Protein Homology CDS 5278 10557 . - 0 ID=cds-WP_094915139.1;Parent=gene-CCO57_RS21435;Dbxref=GenBank:WP_094915139.1;Name=WP_094915139.1;gbkey=CDS;gene=traI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949137.1;locus_tag=CCO57_RS21435;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_094915139.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 10557 12791 . - . ID=gene-CCO57_RS21440;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=CCO57_RS21440;old_locus_tag=CCO57_21420 NZ_NPMC01000019.1 Protein Homology CDS 10557 12791 . - 0 ID=cds-WP_094915140.1;Parent=gene-CCO57_RS21440;Dbxref=GenBank:WP_094915140.1;Name=WP_094915140.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056180.1;locus_tag=CCO57_RS21440;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_094915140.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 12933 13670 . - . ID=gene-CCO57_RS21445;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=CCO57_RS21445;old_locus_tag=CCO57_21425 NZ_NPMC01000019.1 Protein Homology CDS 12933 13670 . - 0 ID=cds-WP_094915141.1;Parent=gene-CCO57_RS21445;Dbxref=GenBank:WP_094915141.1;Name=WP_094915141.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485398.1;locus_tag=CCO57_RS21445;product=conjugal transfer complement resistance protein TraT;protein_id=WP_094915141.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 13860 14420 . - . ID=gene-CCO57_RS21450;Name=CCO57_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21450;old_locus_tag=CCO57_21430 NZ_NPMC01000019.1 Protein Homology CDS 13860 14420 . - 0 ID=cds-WP_094915142.1;Parent=gene-CCO57_RS21450;Dbxref=GenBank:WP_094915142.1;Name=WP_094915142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490372.1;locus_tag=CCO57_RS21450;product=protein traS;protein_id=WP_094915142.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 14432 17329 . - . ID=gene-CCO57_RS21455;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=CCO57_RS21455;old_locus_tag=CCO57_21435 NZ_NPMC01000019.1 Protein Homology CDS 14432 17329 . - 0 ID=cds-WP_094915143.1;Parent=gene-CCO57_RS21455;Dbxref=GenBank:WP_094915143.1;Name=WP_094915143.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257544.1;locus_tag=CCO57_RS21455;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_094915143.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 17331 18692 . - . ID=gene-CCO57_RS21460;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=CCO57_RS21460;old_locus_tag=CCO57_21440 NZ_NPMC01000019.1 Protein Homology CDS 17331 18692 . - 0 ID=cds-WP_094915144.1;Parent=gene-CCO57_RS21460;Dbxref=GenBank:WP_094915144.1;Name=WP_094915144.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808382.1;locus_tag=CCO57_RS21460;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_094915144.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 18692 19303 . - . ID=gene-CCO57_RS21465;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=CCO57_RS21465;old_locus_tag=CCO57_21445 NZ_NPMC01000019.1 Protein Homology CDS 18692 19303 . - 0 ID=cds-WP_094915145.1;Parent=gene-CCO57_RS21465;Dbxref=GenBank:WP_094915145.1;Name=WP_094915145.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808377.1;locus_tag=CCO57_RS21465;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_094915145.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 19329 20108 . - . ID=gene-CCO57_RS21470;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=CCO57_RS21470;old_locus_tag=CCO57_21450 NZ_NPMC01000019.1 Protein Homology CDS 19329 20108 . - 0 ID=cds-WP_094915146.1;Parent=gene-CCO57_RS21470;Dbxref=GenBank:WP_094915146.1;Name=WP_094915146.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403279.1;locus_tag=CCO57_RS21470;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_094915146.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 20105 21934 . - . ID=gene-CCO57_RS21475;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=CCO57_RS21475;old_locus_tag=CCO57_21455 NZ_NPMC01000019.1 Protein Homology CDS 20105 21934 . - 0 ID=cds-WP_094915147.1;Parent=gene-CCO57_RS21475;Dbxref=GenBank:WP_094915147.1;Name=WP_094915147.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403430.1;locus_tag=CCO57_RS21475;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_094915147.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 21931 22545 . - . ID=gene-CCO57_RS21480;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=CCO57_RS21480;old_locus_tag=CCO57_21460 NZ_NPMC01000019.1 Protein Homology CDS 21931 22545 . - 0 ID=cds-WP_094915148.1;Parent=gene-CCO57_RS21480;Dbxref=GenBank:WP_094915148.1;Name=WP_094915148.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000832511.1;locus_tag=CCO57_RS21480;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_094915148.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 22542 22910 . - . ID=gene-CCO57_RS21485;Name=CCO57_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21485;old_locus_tag=CCO57_21465 NZ_NPMC01000019.1 Protein Homology CDS 22542 22910 . - 0 ID=cds-WP_020842473.1;Parent=gene-CCO57_RS21485;Dbxref=GenBank:WP_020842473.1;Name=WP_020842473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525842.1;locus_tag=CCO57_RS21485;product=hypothetical protein;protein_id=WP_020842473.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 22921 23895 . - . ID=gene-CCO57_RS21490;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=CCO57_RS21490;old_locus_tag=CCO57_21470 NZ_NPMC01000019.1 Protein Homology CDS 22921 23895 . - 0 ID=cds-WP_049823147.1;Parent=gene-CCO57_RS21490;Dbxref=GenBank:WP_049823147.1;Name=WP_049823147.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150659.1;locus_tag=CCO57_RS21490;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_049823147.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 23915 24553 . - . ID=gene-CCO57_RS21495;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=CCO57_RS21495;old_locus_tag=CCO57_21475 NZ_NPMC01000019.1 Protein Homology CDS 23915 24553 . - 0 ID=cds-WP_094915149.1;Parent=gene-CCO57_RS21495;Dbxref=GenBank:WP_094915149.1;Name=WP_094915149.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525788.1;locus_tag=CCO57_RS21495;product=type-F conjugative transfer system protein TraW;protein_id=WP_094915149.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 24553 24987 . - . ID=gene-CCO57_RS21500;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=CCO57_RS21500;old_locus_tag=CCO57_21480 NZ_NPMC01000019.1 Protein Homology CDS 24553 24987 . - 0 ID=cds-WP_094915150.1;Parent=gene-CCO57_RS21500;Dbxref=GenBank:WP_094915150.1;Name=WP_094915150.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004558355.1;locus_tag=CCO57_RS21500;product=type-F conjugative transfer system protein TrbI;protein_id=WP_094915150.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 24984 27575 . - . ID=gene-CCO57_RS21505;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=CCO57_RS21505;old_locus_tag=CCO57_21485 NZ_NPMC01000019.1 Protein Homology CDS 24984 27575 . - 0 ID=cds-WP_074173834.1;Parent=gene-CCO57_RS21505;Dbxref=GenBank:WP_074173834.1;Name=WP_074173834.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000714154.1;locus_tag=CCO57_RS21505;product=type IV secretion system protein TraC;protein_id=WP_074173834.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 27586 28200 . - . ID=gene-CCO57_RS21510;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=CCO57_RS21510;old_locus_tag=CCO57_21490 NZ_NPMC01000019.1 Protein Homology CDS 27586 28200 . - 0 ID=cds-WP_020833557.1;Parent=gene-CCO57_RS21510;Dbxref=GenBank:WP_020833557.1;Name=WP_020833557.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724456.1;locus_tag=CCO57_RS21510;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_020833557.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 28218 28670 . - . ID=gene-CCO57_RS21515;Name=CCO57_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21515;old_locus_tag=CCO57_21495 NZ_NPMC01000019.1 Protein Homology CDS 28218 28670 . - 0 ID=cds-WP_079951803.1;Parent=gene-CCO57_RS21515;Dbxref=GenBank:WP_079951803.1;Name=WP_079951803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994241.1;locus_tag=CCO57_RS21515;product=hypothetical protein;protein_id=WP_079951803.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 28674 28898 . - . ID=gene-CCO57_RS21520;Name=CCO57_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21520;old_locus_tag=CCO57_21500 NZ_NPMC01000019.1 Protein Homology CDS 28674 28898 . - 0 ID=cds-WP_094915151.1;Parent=gene-CCO57_RS21520;Dbxref=GenBank:WP_094915151.1;Name=WP_094915151.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786061.1;locus_tag=CCO57_RS21520;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_094915151.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 29008 30369 . - . ID=gene-CCO57_RS21525;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=CCO57_RS21525;old_locus_tag=CCO57_21505 NZ_NPMC01000019.1 Protein Homology CDS 29008 30369 . - 0 ID=cds-WP_094915152.1;Parent=gene-CCO57_RS21525;Dbxref=GenBank:WP_094915152.1;Name=WP_094915152.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024510.1;locus_tag=CCO57_RS21525;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_094915152.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 30356 31096 . - . ID=gene-CCO57_RS21530;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=CCO57_RS21530;old_locus_tag=CCO57_21510 NZ_NPMC01000019.1 Protein Homology CDS 30356 31096 . - 0 ID=cds-WP_094915153.1;Parent=gene-CCO57_RS21530;Dbxref=GenBank:WP_094915153.1;Name=WP_094915153.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455355.1;locus_tag=CCO57_RS21530;product=type-F conjugative transfer system secretin TraK;protein_id=WP_094915153.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 31086 31649 . - . ID=gene-CCO57_RS21535;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=CCO57_RS21535;old_locus_tag=CCO57_21515 NZ_NPMC01000019.1 Protein Homology CDS 31086 31649 . - 0 ID=cds-WP_015062648.1;Parent=gene-CCO57_RS21535;Dbxref=GenBank:WP_015062648.1;Name=WP_015062648.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395451.1;locus_tag=CCO57_RS21535;product=type IV conjugative transfer system protein TraE;protein_id=WP_015062648.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 31669 31974 . - . ID=gene-CCO57_RS21540;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=CCO57_RS21540;old_locus_tag=CCO57_21520 NZ_NPMC01000019.1 Protein Homology CDS 31669 31974 . - 0 ID=cds-WP_000398849.1;Parent=gene-CCO57_RS21540;Dbxref=GenBank:WP_000398849.1;Name=WP_000398849.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490353.1;locus_tag=CCO57_RS21540;product=type IV conjugative transfer system protein TraL;protein_id=WP_000398849.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 31976 32335 . - . ID=gene-CCO57_RS21545;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=CCO57_RS21545;old_locus_tag=CCO57_21525 NZ_NPMC01000019.1 Protein Homology CDS 31976 32335 . - 0 ID=cds-WP_080188459.1;Parent=gene-CCO57_RS21545;Dbxref=GenBank:WP_080188459.1;Name=WP_080188459.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455360.1;locus_tag=CCO57_RS21545;product=type IV conjugative transfer system pilin TraA;protein_id=WP_080188459.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 32452 32685 . - . ID=gene-CCO57_RS21550;Name=CCO57_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21550;old_locus_tag=CCO57_21530 NZ_NPMC01000019.1 Protein Homology CDS 32452 32685 . - 0 ID=cds-WP_000662610.1;Parent=gene-CCO57_RS21550;Dbxref=GenBank:WP_000662610.1;Name=WP_000662610.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000662610.1;locus_tag=CCO57_RS21550;product=TraY domain-containing protein;protein_id=WP_000662610.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 32891 33340 . - . ID=gene-CCO57_RS21555;Name=CCO57_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21555;old_locus_tag=CCO57_21535 NZ_NPMC01000019.1 Protein Homology CDS 32891 33340 . - 0 ID=cds-WP_080188458.1;Parent=gene-CCO57_RS21555;Dbxref=GenBank:WP_080188458.1;Name=WP_080188458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808391.1;locus_tag=CCO57_RS21555;product=helix-turn-helix domain-containing protein;protein_id=WP_080188458.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 33637 34020 . - . ID=gene-CCO57_RS21560;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=CCO57_RS21560;old_locus_tag=CCO57_21540 NZ_NPMC01000019.1 Protein Homology CDS 33637 34020 . - 0 ID=cds-WP_001808390.1;Parent=gene-CCO57_RS21560;Dbxref=GenBank:WP_001808390.1;Name=WP_001808390.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124390.1;locus_tag=CCO57_RS21560;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_001808390.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 34490 34945 . + . ID=gene-CCO57_RS21565;Name=CCO57_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21565;old_locus_tag=CCO57_21545 NZ_NPMC01000019.1 Protein Homology CDS 34490 34945 . + 0 ID=cds-WP_080071169.1;Parent=gene-CCO57_RS21565;Dbxref=GenBank:WP_080071169.1;Name=WP_080071169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001232722.1;locus_tag=CCO57_RS21565;product=transglycosylase SLT domain-containing protein;protein_id=WP_080071169.1;transl_table=11 NZ_NPMC01000019.1 RefSeq pseudogene 34956 35542 . - . ID=gene-CCO57_RS21570;Name=CCO57_RS21570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21570;old_locus_tag=CCO57_21550;pseudo=true NZ_NPMC01000019.1 Protein Homology CDS 34956 35542 . - 0 ID=cds-CCO57_RS21570;Parent=gene-CCO57_RS21570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000278069.1;locus_tag=CCO57_RS21570;product=antirestriction protein;pseudo=true;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 36133 36966 . - . ID=gene-CCO57_RS21580;Name=CCO57_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21580;old_locus_tag=CCO57_21560 NZ_NPMC01000019.1 Protein Homology CDS 36133 36966 . - 0 ID=cds-WP_070812941.1;Parent=gene-CCO57_RS21580;Dbxref=GenBank:WP_070812941.1;Name=WP_070812941.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080850.1;locus_tag=CCO57_RS21580;product=N-6 DNA methylase;protein_id=WP_070812941.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 37013 37159 . - . ID=gene-CCO57_RS21585;Name=CCO57_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21585;old_locus_tag=CCO57_21565 NZ_NPMC01000019.1 Protein Homology CDS 37013 37159 . - 0 ID=cds-WP_001159046.1;Parent=gene-CCO57_RS21585;Dbxref=GenBank:WP_001159046.1;Name=WP_001159046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403164.1;locus_tag=CCO57_RS21585;product=hypothetical protein;protein_id=WP_001159046.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 37254 37601 . - . ID=gene-CCO57_RS21590;Name=CCO57_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21590;old_locus_tag=CCO57_21570 NZ_NPMC01000019.1 Protein Homology CDS 37254 37601 . - 0 ID=cds-WP_042005170.1;Parent=gene-CCO57_RS21590;Dbxref=GenBank:WP_042005170.1;Name=WP_042005170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152749.1;locus_tag=CCO57_RS21590;product=hypothetical protein;protein_id=WP_042005170.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 37658 38062 . - . ID=gene-CCO57_RS21595;Name=CCO57_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21595;old_locus_tag=CCO57_21575 NZ_NPMC01000019.1 Protein Homology CDS 37658 38062 . - 0 ID=cds-WP_094888762.1;Parent=gene-CCO57_RS21595;Dbxref=GenBank:WP_094888762.1;Name=WP_094888762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534946.1;locus_tag=CCO57_RS21595;product=ammonia monooxygenase;protein_id=WP_094888762.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 38062 38256 . - . ID=gene-CCO57_RS24715;Name=CCO57_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24715;old_locus_tag=CCO57_21580 NZ_NPMC01000019.1 Protein Homology CDS 38062 38256 . - 0 ID=cds-WP_094888763.1;Parent=gene-CCO57_RS24715;Dbxref=GenBank:WP_094888763.1;Name=WP_094888763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001404183.1;locus_tag=CCO57_RS24715;product=hypothetical protein;protein_id=WP_094888763.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 38789 39163 . - . ID=gene-CCO57_RS21605;Name=CCO57_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21605;old_locus_tag=CCO57_21585 NZ_NPMC01000019.1 Protein Homology CDS 38789 39163 . - 0 ID=cds-WP_020833566.1;Parent=gene-CCO57_RS21605;Dbxref=GenBank:WP_020833566.1;Name=WP_020833566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525539.1;locus_tag=CCO57_RS21605;product=hypothetical protein;protein_id=WP_020833566.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 39461 39814 . - . ID=gene-CCO57_RS21610;Name=CCO57_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21610;old_locus_tag=CCO57_21590 NZ_NPMC01000019.1 Protein Homology CDS 39461 39814 . - 0 ID=cds-WP_020833567.1;Parent=gene-CCO57_RS21610;Dbxref=GenBank:WP_020833567.1;Name=WP_020833567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000872088.1;locus_tag=CCO57_RS21610;product=hypothetical protein;protein_id=WP_020833567.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 39811 40539 . - . ID=gene-CCO57_RS21615;Name=CCO57_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21615;old_locus_tag=CCO57_21595 NZ_NPMC01000019.1 Protein Homology CDS 39811 40539 . - 0 ID=cds-WP_079951808.1;Parent=gene-CCO57_RS21615;Dbxref=GenBank:WP_079951808.1;Name=WP_079951808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000611691.1;locus_tag=CCO57_RS21615;product=plasmid SOS inhibition protein A;protein_id=WP_079951808.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 40536 40970 . - . ID=gene-CCO57_RS21620;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=CCO57_RS21620;old_locus_tag=CCO57_21600 NZ_NPMC01000019.1 Protein Homology CDS 40536 40970 . - 0 ID=cds-WP_094888764.1;Parent=gene-CCO57_RS21620;Dbxref=GenBank:WP_094888764.1;Name=WP_094888764.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244368.1;locus_tag=CCO57_RS21620;product=conjugation system SOS inhibitor PsiB;protein_id=WP_094888764.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 41011 43044 . - . ID=gene-CCO57_RS21625;Name=CCO57_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21625;old_locus_tag=CCO57_21605 NZ_NPMC01000019.1 Protein Homology CDS 41011 43044 . - 0 ID=cds-WP_094888765.1;Parent=gene-CCO57_RS21625;Dbxref=GenBank:WP_094888765.1;Name=WP_094888765.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117156.1;locus_tag=CCO57_RS21625;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_094888765.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 43115 43357 . - . ID=gene-CCO57_RS21630;Name=CCO57_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21630;old_locus_tag=CCO57_21610 NZ_NPMC01000019.1 Protein Homology CDS 43115 43357 . - 0 ID=cds-WP_094888777.1;Parent=gene-CCO57_RS21630;Dbxref=GenBank:WP_094888777.1;Name=WP_094888777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490555.1;locus_tag=CCO57_RS21630;product=DUF905 domain-containing protein;protein_id=WP_094888777.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 43410 43964 . - . ID=gene-CCO57_RS21635;Name=CCO57_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21635;old_locus_tag=CCO57_21615 NZ_NPMC01000019.1 Protein Homology CDS 43410 43964 . - 0 ID=cds-WP_065680751.1;Parent=gene-CCO57_RS21635;Dbxref=GenBank:WP_065680751.1;Name=WP_065680751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229748.1;locus_tag=CCO57_RS21635;product=single-stranded DNA-binding protein;protein_id=WP_065680751.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 44295 44516 . + . ID=gene-CCO57_RS25055;Name=CCO57_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS25055;old_locus_tag=CCO57_21620 NZ_NPMC01000019.1 GeneMarkS-2+ CDS 44295 44516 . + 0 ID=cds-WP_114053208.1;Parent=gene-CCO57_RS25055;Dbxref=GenBank:WP_114053208.1;Name=WP_114053208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS25055;product=hypothetical protein;protein_id=WP_114053208.1;transl_table=11 NZ_NPMC01000019.1 RefSeq pseudogene 44657 44973 . - . ID=gene-CCO57_RS21645;Name=CCO57_RS21645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21645;old_locus_tag=CCO57_21625;pseudo=true NZ_NPMC01000019.1 Protein Homology CDS 44657 44973 . - 0 ID=cds-CCO57_RS21645;Parent=gene-CCO57_RS21645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118473.1;locus_tag=CCO57_RS21645;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000019.1 RefSeq pseudogene 45008 45261 . - . ID=gene-CCO57_RS21650;Name=CCO57_RS21650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21650;old_locus_tag=CCO57_21630;pseudo=true NZ_NPMC01000019.1 Protein Homology CDS 45008 45261 . - 0 ID=cds-CCO57_RS21650;Parent=gene-CCO57_RS21650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229756.1;locus_tag=CCO57_RS21650;product=DNA polymerase III subunit theta;pseudo=true;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 45454 45645 . - . ID=gene-CCO57_RS21655;Name=CCO57_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21655;old_locus_tag=CCO57_21635 NZ_NPMC01000019.1 Protein Homology CDS 45454 45645 . - 0 ID=cds-WP_020833574.1;Parent=gene-CCO57_RS21655;Dbxref=GenBank:WP_020833574.1;Name=WP_020833574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229757.1;locus_tag=CCO57_RS21655;product=hypothetical protein;protein_id=WP_020833574.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 45688 46194 . - . ID=gene-CCO57_RS21660;Name=CCO57_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21660;old_locus_tag=CCO57_21640 NZ_NPMC01000019.1 Protein Homology CDS 45688 46194 . - 0 ID=cds-WP_023197482.1;Parent=gene-CCO57_RS21660;Dbxref=GenBank:WP_023197482.1;Name=WP_023197482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108571.1;locus_tag=CCO57_RS21660;product=antirestriction protein ArdA;protein_id=WP_023197482.1;transl_table=11 NZ_NPMC01000019.1 RefSeq pseudogene 46835 47506 . + . ID=gene-CCO57_RS21675;Name=CCO57_RS21675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21675;old_locus_tag=CCO57_21650;pseudo=true NZ_NPMC01000019.1 Protein Homology CDS 46835 47506 . + 0 ID=cds-CCO57_RS21675;Parent=gene-CCO57_RS21675;Note=internal stop;Ontology_term=GO:0006974,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405808.1;locus_tag=CCO57_RS21675;product=SOS response-associated peptidase family protein;pseudo=true;transl_table=11 NZ_NPMC01000019.1 RefSeq pseudogene 47686 48108 . + . ID=gene-CCO57_RS21680;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=pseudogene;locus_tag=CCO57_RS21680;old_locus_tag=CCO57_21655;pseudo=true NZ_NPMC01000019.1 Protein Homology CDS 47686 48108 . + 0 ID=cds-CCO57_RS21680;Parent=gene-CCO57_RS21680;Note=internal stop;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490545.1;locus_tag=CCO57_RS21680;product=translesion error-prone DNA polymerase V autoproteolytic subunit;pseudo=true;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 48108 49382 . + . ID=gene-CCO57_RS21685;Name=CCO57_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21685;old_locus_tag=CCO57_21660 NZ_NPMC01000019.1 Protein Homology CDS 48108 49382 . + 0 ID=cds-WP_094888768.1;Parent=gene-CCO57_RS21685;Dbxref=GenBank:WP_094888768.1;Name=WP_094888768.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490544.1;locus_tag=CCO57_RS21685;product=Y-family DNA polymerase;protein_id=WP_094888768.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 49464 50438 . - . ID=gene-CCO57_RS21690;Name=CCO57_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21690;old_locus_tag=CCO57_21665 NZ_NPMC01000019.1 Protein Homology CDS 49464 50438 . - 0 ID=cds-WP_044127555.1;Parent=gene-CCO57_RS21690;Dbxref=GenBank:WP_044127555.1;Name=WP_044127555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229774.1;locus_tag=CCO57_RS21690;product=ParB family protein;protein_id=WP_044127555.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 50438 51643 . - . ID=gene-CCO57_RS21695;Name=CCO57_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21695;old_locus_tag=CCO57_21670 NZ_NPMC01000019.1 Protein Homology CDS 50438 51643 . - 0 ID=cds-WP_080188499.1;Parent=gene-CCO57_RS21695;Dbxref=GenBank:WP_080188499.1;Name=WP_080188499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490542.1;locus_tag=CCO57_RS21695;product=AAA family ATPase;protein_id=WP_080188499.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 51777 51917 . - . ID=gene-CCO57_RS24355;Name=CCO57_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24355 NZ_NPMC01000019.1 GeneMarkS-2+ CDS 51777 51917 . - 0 ID=cds-WP_156017682.1;Parent=gene-CCO57_RS24355;Dbxref=GenBank:WP_156017682.1;Name=WP_156017682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24355;product=hypothetical protein;protein_id=WP_156017682.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 52058 52999 . + . ID=gene-CCO57_RS21700;Name=CCO57_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21700;old_locus_tag=CCO57_21675 NZ_NPMC01000019.1 Protein Homology CDS 52058 52999 . + 0 ID=cds-WP_000728919.1;Parent=gene-CCO57_RS21700;Dbxref=GenBank:WP_000728919.1;Name=WP_000728919.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=CCO57_RS21700;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000728919.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 52996 53607 . - . ID=gene-CCO57_RS21705;Name=CCO57_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21705;old_locus_tag=CCO57_21680 NZ_NPMC01000019.1 Protein Homology CDS 52996 53607 . - 0 ID=cds-WP_094915154.1;Parent=gene-CCO57_RS21705;Dbxref=GenBank:WP_094915154.1;Name=WP_094915154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455304.1;locus_tag=CCO57_RS21705;product=DUF2913 family protein;protein_id=WP_094915154.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 53604 53999 . - . ID=gene-CCO57_RS21710;Name=CCO57_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21710;old_locus_tag=CCO57_21685 NZ_NPMC01000019.1 Protein Homology CDS 53604 53999 . - 0 ID=cds-WP_094888770.1;Parent=gene-CCO57_RS21710;Dbxref=GenBank:WP_094888770.1;Name=WP_094888770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429587.1;locus_tag=CCO57_RS21710;product=hypothetical protein;protein_id=WP_094888770.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 54052 54915 . - . ID=gene-CCO57_RS21715;Name=CCO57_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21715;old_locus_tag=CCO57_21690 NZ_NPMC01000019.1 Protein Homology CDS 54052 54915 . - 0 ID=cds-WP_175933134.1;Parent=gene-CCO57_RS21715;Dbxref=GenBank:WP_175933134.1;Name=WP_175933134.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525580.1;locus_tag=CCO57_RS21715;product=3'-5' exonuclease;protein_id=WP_175933134.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 54908 56023 . - . ID=gene-CCO57_RS21720;Name=CCO57_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21720;old_locus_tag=CCO57_21695 NZ_NPMC01000019.1 Protein Homology CDS 54908 56023 . - 0 ID=cds-WP_094888771.1;Parent=gene-CCO57_RS21720;Dbxref=GenBank:WP_094888771.1;Name=WP_094888771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490538.1;locus_tag=CCO57_RS21720;product=DNA-binding protein;protein_id=WP_094888771.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 56281 56769 . + . ID=gene-CCO57_RS21725;Name=CCO57_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21725;old_locus_tag=CCO57_21700 NZ_NPMC01000019.1 Protein Homology CDS 56281 56769 . + 0 ID=cds-WP_094888772.1;Parent=gene-CCO57_RS21725;Dbxref=GenBank:WP_094888772.1;Name=WP_094888772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490537.1;locus_tag=CCO57_RS21725;product=cytoplasmic protein;protein_id=WP_094888772.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 57399 58178 . - . ID=gene-CCO57_RS21735;Name=CCO57_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21735;old_locus_tag=CCO57_21710 NZ_NPMC01000019.1 Protein Homology CDS 57399 58178 . - 0 ID=cds-WP_000982366.1;Parent=gene-CCO57_RS21735;Dbxref=GenBank:WP_000982366.1;Name=WP_000982366.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000982366.1;locus_tag=CCO57_RS21735;product=site-specific integrase;protein_id=WP_000982366.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 58310 59227 . - . ID=gene-CCO57_RS21740;Name=CCO57_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21740;old_locus_tag=CCO57_21715 NZ_NPMC01000019.1 Protein Homology CDS 58310 59227 . - 0 ID=cds-WP_001063006.1;Parent=gene-CCO57_RS21740;Dbxref=GenBank:WP_001063006.1;Name=WP_001063006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063006.1;locus_tag=CCO57_RS21740;product=hypothetical protein;protein_id=WP_001063006.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 59812 60072 . + . ID=gene-CCO57_RS21745;Name=CCO57_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21745;old_locus_tag=CCO57_21720 NZ_NPMC01000019.1 Protein Homology CDS 59812 60072 . + 0 ID=cds-WP_094915155.1;Parent=gene-CCO57_RS21745;Dbxref=GenBank:WP_094915155.1;Name=WP_094915155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000929810.1;locus_tag=CCO57_RS21745;product=hypothetical protein;protein_id=WP_094915155.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 60069 61046 . + . ID=gene-CCO57_RS21750;Name=CCO57_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21750;old_locus_tag=CCO57_21725 NZ_NPMC01000019.1 Protein Homology CDS 60069 61046 . + 0 ID=cds-WP_094915156.1;Parent=gene-CCO57_RS21750;Dbxref=GenBank:WP_094915156.1;Name=WP_094915156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102531.1;locus_tag=CCO57_RS21750;product=hypothetical protein;protein_id=WP_094915156.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 61438 61968 . - . ID=gene-CCO57_RS21755;Name=CCO57_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21755;old_locus_tag=CCO57_21730 NZ_NPMC01000019.1 Protein Homology CDS 61438 61968 . - 0 ID=cds-WP_094888774.1;Parent=gene-CCO57_RS21755;Dbxref=GenBank:WP_094888774.1;Name=WP_094888774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000348879.1;locus_tag=CCO57_RS21755;product=GNAT family N-acetyltransferase;protein_id=WP_094888774.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 61972 62241 . - . ID=gene-CCO57_RS21760;Name=CCO57_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21760;old_locus_tag=CCO57_21735 NZ_NPMC01000019.1 Protein Homology CDS 61972 62241 . - 0 ID=cds-WP_001275014.1;Parent=gene-CCO57_RS21760;Dbxref=GenBank:WP_001275014.1;Name=WP_001275014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001303459.1;locus_tag=CCO57_RS21760;product=DUF1778 domain-containing protein;protein_id=WP_001275014.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 63096 64085 . + . ID=gene-CCO57_RS21765;Name=CCO57_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21765;old_locus_tag=CCO57_21740 NZ_NPMC01000019.1 Protein Homology CDS 63096 64085 . + 0 ID=cds-WP_140428183.1;Parent=gene-CCO57_RS21765;Dbxref=GenBank:WP_140428183.1;Name=WP_140428183.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490513.1;locus_tag=CCO57_RS21765;product=RepB family plasmid replication initiator protein;protein_id=WP_140428183.1;transl_table=11 NZ_NPMC01000019.1 RefSeq gene 64408 65148 . - . ID=gene-CCO57_RS21770;Name=CCO57_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21770;old_locus_tag=CCO57_21745 NZ_NPMC01000019.1 Protein Homology CDS 64408 65148 . - 0 ID=cds-WP_094915158.1;Parent=gene-CCO57_RS21770;Dbxref=GenBank:WP_094915158.1;Name=WP_094915158.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001586233.1;locus_tag=CCO57_RS21770;product=tyrosine-type recombinase/integrase;protein_id=WP_094915158.1;transl_table=11 NZ_NPMC01000019.1 RefSeq pseudogene 66998 67573 . + . ID=gene-CCO57_RS21780;Name=CCO57_RS21780;end_range=67573,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21780;old_locus_tag=CCO57_21755;partial=true;pseudo=true NZ_NPMC01000019.1 Protein Homology CDS 66998 67573 . + 0 ID=cds-CCO57_RS21780;Parent=gene-CCO57_RS21780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=67573,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009503.1;locus_tag=CCO57_RS21780;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 NZ_NPMC01000019.1 RefSeq pseudogene 67597 68017 . + . ID=gene-CCO57_RS21785;Name=CCO57_RS21785;end_range=68017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21785;old_locus_tag=CCO57_21760;partial=true;pseudo=true NZ_NPMC01000019.1 Protein Homology CDS 67597 68017 . + 0 ID=cds-CCO57_RS21785;Parent=gene-CCO57_RS21785;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=68017,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036416.6;locus_tag=CCO57_RS21785;partial=true;product=fimbrial assembly protein;pseudo=true;transl_table=11 ##sequence-region NZ_NPMC01000002.1 1 520558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000002.1 RefSeq region 1 520558 . + . ID=NZ_NPMC01000002.1:1..520558;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000002.1 RefSeq gene 958 1896 . + . ID=gene-CCO57_RS02790;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=CCO57_RS02790;old_locus_tag=CCO57_02790 NZ_NPMC01000002.1 Protein Homology CDS 958 1896 . + 0 ID=cds-WP_001094907.1;Parent=gene-CCO57_RS02790;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=CCO57_RS02790;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 1994 2983 . + . ID=gene-CCO57_RS02795;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CCO57_RS02795;old_locus_tag=CCO57_02795 NZ_NPMC01000002.1 Protein Homology CDS 1994 2983 . + 0 ID=cds-WP_000548368.1;Parent=gene-CCO57_RS02795;Dbxref=GenBank:WP_000548368.1;Name=WP_000548368.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=CCO57_RS02795;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548368.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 3004 4335 . + . ID=gene-CCO57_RS02800;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=CCO57_RS02800;old_locus_tag=CCO57_02800 NZ_NPMC01000002.1 Protein Homology CDS 3004 4335 . + 0 ID=cds-WP_000108129.1;Parent=gene-CCO57_RS02800;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=CCO57_RS02800;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 4403 5611 . + . ID=gene-CCO57_RS02805;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=CCO57_RS02805;old_locus_tag=CCO57_02805 NZ_NPMC01000002.1 Protein Homology CDS 4403 5611 . + 0 ID=cds-WP_001001855.1;Parent=gene-CCO57_RS02805;Dbxref=GenBank:WP_001001855.1;Name=WP_001001855.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=CCO57_RS02805;product=propionate kinase;protein_id=WP_001001855.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 5645 7939 . + . ID=gene-CCO57_RS02810;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO57_RS02810;old_locus_tag=CCO57_02810 NZ_NPMC01000002.1 Protein Homology CDS 5645 7939 . + 0 ID=cds-WP_094914798.1;Parent=gene-CCO57_RS02810;Dbxref=GenBank:WP_094914798.1;Name=WP_094914798.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=CCO57_RS02810;product=formate C-acetyltransferase;protein_id=WP_094914798.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 8009 9373 . + . ID=gene-CCO57_RS02815;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=CCO57_RS02815;old_locus_tag=CCO57_02815 NZ_NPMC01000002.1 Protein Homology CDS 8009 9373 . + 0 ID=cds-WP_000622086.1;Parent=gene-CCO57_RS02815;Dbxref=GenBank:WP_000622086.1;Name=WP_000622086.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=CCO57_RS02815;product=L-serine ammonia-lyase;protein_id=WP_000622086.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 9689 11020 . + . ID=gene-CCO57_RS02820;Name=CCO57_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02820;old_locus_tag=CCO57_02820 NZ_NPMC01000002.1 Protein Homology CDS 9689 11020 . + 0 ID=cds-WP_000443189.1;Parent=gene-CCO57_RS02820;Dbxref=GenBank:WP_000443189.1;Name=WP_000443189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=CCO57_RS02820;product=amino acid permease;protein_id=WP_000443189.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 11046 12356 . + . ID=gene-CCO57_RS02825;Name=CCO57_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02825;old_locus_tag=CCO57_02825 NZ_NPMC01000002.1 Protein Homology CDS 11046 12356 . + 0 ID=cds-WP_031566757.1;Parent=gene-CCO57_RS02825;Dbxref=GenBank:WP_031566757.1;Name=WP_031566757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=CCO57_RS02825;product=serine dehydratase subunit alpha family protein;protein_id=WP_031566757.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 12469 12633 . - . ID=gene-CCO57_RS02830;Name=CCO57_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02830;old_locus_tag=CCO57_02830 NZ_NPMC01000002.1 Protein Homology CDS 12469 12633 . - 0 ID=cds-WP_000039326.1;Parent=gene-CCO57_RS02830;Dbxref=GenBank:WP_000039326.1;Name=WP_000039326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=CCO57_RS02830;product=hypothetical protein;protein_id=WP_000039326.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 12657 13358 . - . ID=gene-CCO57_RS02835;Name=CCO57_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02835;old_locus_tag=CCO57_02835 NZ_NPMC01000002.1 Protein Homology CDS 12657 13358 . - 0 ID=cds-WP_000633548.1;Parent=gene-CCO57_RS02835;Dbxref=GenBank:WP_000633548.1;Name=WP_000633548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=CCO57_RS02835;product=pirin family protein;protein_id=WP_000633548.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 13463 14359 . + . ID=gene-CCO57_RS02840;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=CCO57_RS02840;old_locus_tag=CCO57_02840 NZ_NPMC01000002.1 Protein Homology CDS 13463 14359 . + 0 ID=cds-WP_001041026.1;Parent=gene-CCO57_RS02840;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=CCO57_RS02840;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 14398 14763 . - . ID=gene-CCO57_RS02845;Name=CCO57_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02845;old_locus_tag=CCO57_02845 NZ_NPMC01000002.1 Protein Homology CDS 14398 14763 . - 0 ID=cds-WP_000384139.1;Parent=gene-CCO57_RS02845;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=CCO57_RS02845;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 14887 15873 . - . ID=gene-CCO57_RS02850;Name=CCO57_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02850;old_locus_tag=CCO57_02850 NZ_NPMC01000002.1 Protein Homology CDS 14887 15873 . - 0 ID=cds-WP_023217464.1;Parent=gene-CCO57_RS02850;Dbxref=GenBank:WP_023217464.1;Name=WP_023217464.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=CCO57_RS02850;product=glutathione S-transferase family protein;protein_id=WP_023217464.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 15941 16333 . - . ID=gene-CCO57_RS02855;Name=CCO57_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02855;old_locus_tag=CCO57_02855 NZ_NPMC01000002.1 Protein Homology CDS 15941 16333 . - 0 ID=cds-WP_001592732.1;Parent=gene-CCO57_RS02855;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=CCO57_RS02855;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 16581 16880 . - . ID=gene-CCO57_RS02860;Name=CCO57_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02860;old_locus_tag=CCO57_02860 NZ_NPMC01000002.1 Protein Homology CDS 16581 16880 . - 0 ID=cds-WP_000095496.1;Parent=gene-CCO57_RS02860;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=CCO57_RS02860;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 16877 17275 . - . ID=gene-CCO57_RS02865;Name=CCO57_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02865;old_locus_tag=CCO57_02865 NZ_NPMC01000002.1 Protein Homology CDS 16877 17275 . - 0 ID=cds-WP_000785626.1;Parent=gene-CCO57_RS02865;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=CCO57_RS02865;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 17278 17583 . - . ID=gene-CCO57_RS02870;Name=CCO57_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02870;old_locus_tag=CCO57_02870 NZ_NPMC01000002.1 Protein Homology CDS 17278 17583 . - 0 ID=cds-WP_000031219.1;Parent=gene-CCO57_RS02870;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=CCO57_RS02870;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 17625 17993 . - . ID=gene-CCO57_RS02875;Name=CCO57_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02875;old_locus_tag=CCO57_02875 NZ_NPMC01000002.1 Protein Homology CDS 17625 17993 . - 0 ID=cds-WP_000877297.1;Parent=gene-CCO57_RS02875;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=CCO57_RS02875;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 18138 18521 . - . ID=gene-CCO57_RS02880;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=CCO57_RS02880;old_locus_tag=CCO57_02880 NZ_NPMC01000002.1 Protein Homology CDS 18138 18521 . - 0 ID=cds-WP_000917516.1;Parent=gene-CCO57_RS02880;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=CCO57_RS02880;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 18525 19187 . - . ID=gene-CCO57_RS02885;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=CCO57_RS02885;old_locus_tag=CCO57_02885 NZ_NPMC01000002.1 Protein Homology CDS 18525 19187 . - 0 ID=cds-WP_000422141.1;Parent=gene-CCO57_RS02885;Dbxref=GenBank:WP_000422141.1;Name=WP_000422141.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=CCO57_RS02885;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422141.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 19637 20881 . - . ID=gene-CCO57_RS02895;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=CCO57_RS02895;old_locus_tag=CCO57_02895 NZ_NPMC01000002.1 Protein Homology CDS 19637 20881 . - 0 ID=cds-WP_094914799.1;Parent=gene-CCO57_RS02895;Dbxref=GenBank:WP_094914799.1;Name=WP_094914799.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=CCO57_RS02895;product=serine/threonine transporter SstT;protein_id=WP_094914799.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 21136 22104 . - . ID=gene-CCO57_RS02900;Name=CCO57_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02900;old_locus_tag=CCO57_02900 NZ_NPMC01000002.1 Protein Homology CDS 21136 22104 . - 0 ID=cds-WP_001098833.1;Parent=gene-CCO57_RS02900;Dbxref=GenBank:WP_001098833.1;Name=WP_001098833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=CCO57_RS02900;product=TerC family protein;protein_id=WP_001098833.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 22376 23374 . - . ID=gene-CCO57_RS02905;Name=CCO57_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02905;old_locus_tag=CCO57_02905 NZ_NPMC01000002.1 Protein Homology CDS 22376 23374 . - 0 ID=cds-WP_000617687.1;Parent=gene-CCO57_RS02905;Dbxref=GenBank:WP_000617687.1;Name=WP_000617687.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=CCO57_RS02905;product=Gfo/Idh/MocA family protein;protein_id=WP_000617687.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 23463 24155 . - . ID=gene-CCO57_RS02910;Name=CCO57_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02910;old_locus_tag=CCO57_02910 NZ_NPMC01000002.1 Protein Homology CDS 23463 24155 . - 0 ID=cds-WP_000951045.1;Parent=gene-CCO57_RS02910;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=CCO57_RS02910;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 24307 24804 . - . ID=gene-CCO57_RS02915;Name=CCO57_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02915;old_locus_tag=CCO57_02915 NZ_NPMC01000002.1 Protein Homology CDS 24307 24804 . - 0 ID=cds-WP_023226132.1;Parent=gene-CCO57_RS02915;Dbxref=GenBank:WP_023226132.1;Name=WP_023226132.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=CCO57_RS02915;product=M48 family metallopeptidase;protein_id=WP_023226132.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 24890 26026 . + . ID=gene-CCO57_RS02920;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=CCO57_RS02920;old_locus_tag=CCO57_02920 NZ_NPMC01000002.1 Protein Homology CDS 24890 26026 . + 0 ID=cds-WP_094914800.1;Parent=gene-CCO57_RS02920;Dbxref=GenBank:WP_094914800.1;Name=WP_094914800.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=CCO57_RS02920;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_094914800.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 26107 28125 . - . ID=gene-CCO57_RS02925;Name=CCO57_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02925;old_locus_tag=CCO57_02925 NZ_NPMC01000002.1 Protein Homology CDS 26107 28125 . - 0 ID=cds-WP_094914801.1;Parent=gene-CCO57_RS02925;Dbxref=GenBank:WP_094914801.1;Name=WP_094914801.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=CCO57_RS02925;product=FAD-dependent oxidoreductase;protein_id=WP_094914801.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 28296 29675 . - . ID=gene-CCO57_RS02930;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=CCO57_RS02930;old_locus_tag=CCO57_02930 NZ_NPMC01000002.1 Protein Homology CDS 28296 29675 . - 0 ID=cds-WP_001520281.1;Parent=gene-CCO57_RS02930;Dbxref=GenBank:WP_001520281.1;Name=WP_001520281.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=CCO57_RS02930;product=putrescine aminotransferase;protein_id=WP_001520281.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 30105 31625 . + . ID=gene-CCO57_RS02940;Name=CCO57_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02940;old_locus_tag=CCO57_02940 NZ_NPMC01000002.1 Protein Homology CDS 30105 31625 . + 0 ID=cds-WP_000094645.1;Parent=gene-CCO57_RS02940;Dbxref=GenBank:WP_000094645.1;Name=WP_000094645.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=CCO57_RS02940;product=methyl-accepting chemotaxis protein;protein_id=WP_000094645.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 32012 33580 . + . ID=gene-CCO57_RS02945;Name=CCO57_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02945;old_locus_tag=CCO57_02945 NZ_NPMC01000002.1 Protein Homology CDS 32012 33580 . + 0 ID=cds-WP_094914802.1;Parent=gene-CCO57_RS02945;Dbxref=GenBank:WP_094914802.1;Name=WP_094914802.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=CCO57_RS02945;product=methyl-accepting chemotaxis protein;protein_id=WP_094914802.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 33577 34224 . - . ID=gene-CCO57_RS02950;Name=CCO57_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02950;old_locus_tag=CCO57_02950 NZ_NPMC01000002.1 Protein Homology CDS 33577 34224 . - 0 ID=cds-WP_000983434.1;Parent=gene-CCO57_RS02950;Dbxref=GenBank:WP_000983434.1;Name=WP_000983434.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=CCO57_RS02950;product=PadR family transcriptional regulator;protein_id=WP_000983434.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 34456 35223 . + . ID=gene-CCO57_RS02955;Name=CCO57_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02955;old_locus_tag=CCO57_02955 NZ_NPMC01000002.1 Protein Homology CDS 34456 35223 . + 0 ID=cds-WP_094914803.1;Parent=gene-CCO57_RS02955;Dbxref=GenBank:WP_094914803.1;Name=WP_094914803.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=CCO57_RS02955;product=siderophore-interacting protein;protein_id=WP_094914803.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 35461 37260 . - . ID=gene-CCO57_RS02960;Name=CCO57_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02960;old_locus_tag=CCO57_02960 NZ_NPMC01000002.1 GeneMarkS-2+ CDS 35461 37260 . - 0 ID=cds-WP_094914804.1;Parent=gene-CCO57_RS02960;Dbxref=GenBank:WP_094914804.1;Name=WP_094914804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS02960;product=hypothetical protein;protein_id=WP_094914804.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 37260 38294 . - . ID=gene-CCO57_RS02965;Name=CCO57_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02965;old_locus_tag=CCO57_02965 NZ_NPMC01000002.1 Protein Homology CDS 37260 38294 . - 0 ID=cds-WP_033567008.1;Parent=gene-CCO57_RS02965;Dbxref=GenBank:WP_033567008.1;Name=WP_033567008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838000.1;locus_tag=CCO57_RS02965;product=phage integrase;protein_id=WP_033567008.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 38296 38877 . - . ID=gene-CCO57_RS02970;Name=CCO57_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02970;old_locus_tag=CCO57_02970 NZ_NPMC01000002.1 Protein Homology CDS 38296 38877 . - 0 ID=cds-WP_079978918.1;Parent=gene-CCO57_RS02970;Dbxref=GenBank:WP_079978918.1;Name=WP_079978918.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455351.1;locus_tag=CCO57_RS02970;product=phage repressor protein CI;protein_id=WP_079978918.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 39011 39232 . + . ID=gene-CCO57_RS02975;Name=CCO57_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02975;old_locus_tag=CCO57_02975 NZ_NPMC01000002.1 Protein Homology CDS 39011 39232 . + 0 ID=cds-WP_023136170.1;Parent=gene-CCO57_RS02975;Dbxref=GenBank:WP_023136170.1;Name=WP_023136170.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010836041.1;locus_tag=CCO57_RS02975;product=helix-turn-helix transcriptional regulator;protein_id=WP_023136170.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 39263 39766 . + . ID=gene-CCO57_RS02980;Name=CCO57_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02980;old_locus_tag=CCO57_02980 NZ_NPMC01000002.1 Protein Homology CDS 39263 39766 . + 0 ID=cds-WP_033567006.1;Parent=gene-CCO57_RS02980;Dbxref=GenBank:WP_033567006.1;Name=WP_033567006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460876.1;locus_tag=CCO57_RS02980;product=phage regulatory CII family protein;protein_id=WP_033567006.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 39815 40276 . - . ID=gene-CCO57_RS02985;Name=CCO57_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02985;old_locus_tag=CCO57_02985 NZ_NPMC01000002.1 Protein Homology CDS 39815 40276 . - 0 ID=cds-WP_000070842.1;Parent=gene-CCO57_RS02985;Dbxref=GenBank:WP_000070842.1;Name=WP_000070842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000070842.1;locus_tag=CCO57_RS02985;product=hypothetical protein;protein_id=WP_000070842.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 40516 40743 . + . ID=gene-CCO57_RS02990;Name=CCO57_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02990;old_locus_tag=CCO57_02990 NZ_NPMC01000002.1 Protein Homology CDS 40516 40743 . + 0 ID=cds-WP_000643376.1;Parent=gene-CCO57_RS02990;Dbxref=GenBank:WP_000643376.1;Name=WP_000643376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000643374.1;locus_tag=CCO57_RS02990;product=phage filamentation protein Fil family protein;protein_id=WP_000643376.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 40733 41158 . + . ID=gene-CCO57_RS02995;Name=CCO57_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS02995;old_locus_tag=CCO57_02995 NZ_NPMC01000002.1 Protein Homology CDS 40733 41158 . + 0 ID=cds-WP_000996837.1;Parent=gene-CCO57_RS02995;Dbxref=GenBank:WP_000996837.1;Name=WP_000996837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996837.1;locus_tag=CCO57_RS02995;product=hypothetical protein;protein_id=WP_000996837.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 41158 41559 . + . ID=gene-CCO57_RS03000;Name=CCO57_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03000;old_locus_tag=CCO57_03000 NZ_NPMC01000002.1 Protein Homology CDS 41158 41559 . + 0 ID=cds-WP_000022785.1;Parent=gene-CCO57_RS03000;Dbxref=GenBank:WP_000022785.1;Name=WP_000022785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738709.1;locus_tag=CCO57_RS03000;product=hypothetical protein;protein_id=WP_000022785.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 41627 41857 . + . ID=gene-CCO57_RS03005;Name=CCO57_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03005;old_locus_tag=CCO57_03005 NZ_NPMC01000002.1 Protein Homology CDS 41627 41857 . + 0 ID=cds-WP_000057336.1;Parent=gene-CCO57_RS03005;Dbxref=GenBank:WP_000057336.1;Name=WP_000057336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057337.1;locus_tag=CCO57_RS03005;product=DUF2732 family protein;protein_id=WP_000057336.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 41848 42708 . + . ID=gene-CCO57_RS03010;Name=CCO57_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03010;old_locus_tag=CCO57_03010 NZ_NPMC01000002.1 Protein Homology CDS 41848 42708 . + 0 ID=cds-WP_000279402.1;Parent=gene-CCO57_RS03010;Dbxref=GenBank:WP_000279402.1;Name=WP_000279402.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279404.1;locus_tag=CCO57_RS03010;product=DNA adenine methylase;protein_id=WP_000279402.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 42705 44726 . + . ID=gene-CCO57_RS03015;Name=CCO57_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03015;old_locus_tag=CCO57_03015 NZ_NPMC01000002.1 Protein Homology CDS 42705 44726 . + 0 ID=cds-WP_094914805.1;Parent=gene-CCO57_RS03015;Dbxref=GenBank:WP_094914805.1;Name=WP_094914805.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170880.1;locus_tag=CCO57_RS03015;product=replication endonuclease;protein_id=WP_094914805.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 44846 45052 . + . ID=gene-CCO57_RS03020;Name=CCO57_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03020;old_locus_tag=CCO57_03020 NZ_NPMC01000002.1 Protein Homology CDS 44846 45052 . + 0 ID=cds-WP_000353141.1;Parent=gene-CCO57_RS03020;Dbxref=GenBank:WP_000353141.1;Name=WP_000353141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000353144.1;locus_tag=CCO57_RS03020;product=hypothetical protein;protein_id=WP_000353141.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 45026 45349 . - . ID=gene-CCO57_RS03025;Name=CCO57_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03025;old_locus_tag=CCO57_03025 NZ_NPMC01000002.1 Protein Homology CDS 45026 45349 . - 0 ID=cds-WP_001552031.1;Parent=gene-CCO57_RS03025;Dbxref=GenBank:WP_001552031.1;Name=WP_001552031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552031.1;locus_tag=CCO57_RS03025;product=ogr/Delta-like zinc finger family protein;protein_id=WP_001552031.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 45346 46407 . - . ID=gene-CCO57_RS03030;Name=CCO57_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03030;old_locus_tag=CCO57_03030 NZ_NPMC01000002.1 Protein Homology CDS 45346 46407 . - 0 ID=cds-WP_000038208.1;Parent=gene-CCO57_RS03030;Dbxref=GenBank:WP_000038208.1;Name=WP_000038208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038213.1;locus_tag=CCO57_RS03030;product=phage portal protein;protein_id=WP_000038208.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 46404 48179 . - . ID=gene-CCO57_RS03035;Name=CCO57_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03035;old_locus_tag=CCO57_03035 NZ_NPMC01000002.1 Protein Homology CDS 46404 48179 . - 0 ID=cds-WP_001151942.1;Parent=gene-CCO57_RS03035;Dbxref=GenBank:WP_001151942.1;Name=WP_001151942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151939.1;locus_tag=CCO57_RS03035;product=terminase large subunit domain-containing protein;protein_id=WP_001151942.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 48340 49140 . + . ID=gene-CCO57_RS03040;Name=CCO57_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03040;old_locus_tag=CCO57_03040 NZ_NPMC01000002.1 Protein Homology CDS 48340 49140 . + 0 ID=cds-WP_000018798.1;Parent=gene-CCO57_RS03040;Dbxref=GenBank:WP_000018798.1;Name=WP_000018798.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018795.1;locus_tag=CCO57_RS03040;product=GPO family capsid scaffolding protein;protein_id=WP_000018798.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 49202 50224 . + . ID=gene-CCO57_RS03045;Name=CCO57_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03045;old_locus_tag=CCO57_03045 NZ_NPMC01000002.1 Protein Homology CDS 49202 50224 . + 0 ID=cds-WP_000550496.1;Parent=gene-CCO57_RS03045;Dbxref=GenBank:WP_000550496.1;Name=WP_000550496.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550496.1;locus_tag=CCO57_RS03045;product=phage major capsid protein%2C P2 family;protein_id=WP_000550496.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 50228 50929 . + . ID=gene-CCO57_RS03050;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=CCO57_RS03050;old_locus_tag=CCO57_03050 NZ_NPMC01000002.1 Protein Homology CDS 50228 50929 . + 0 ID=cds-WP_001218537.1;Parent=gene-CCO57_RS03050;Dbxref=GenBank:WP_001218537.1;Name=WP_001218537.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218529.1;locus_tag=CCO57_RS03050;product=phage terminase small subunit;protein_id=WP_001218537.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 51026 51478 . + . ID=gene-CCO57_RS03055;Name=CCO57_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03055;old_locus_tag=CCO57_03055 NZ_NPMC01000002.1 Protein Homology CDS 51026 51478 . + 0 ID=cds-WP_170880455.1;Parent=gene-CCO57_RS03055;Dbxref=GenBank:WP_170880455.1;Name=WP_170880455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738723.1;locus_tag=CCO57_RS03055;product=head completion/stabilization protein;protein_id=WP_170880455.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 51475 51981 . + . ID=gene-CCO57_RS03060;Name=CCO57_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03060;old_locus_tag=CCO57_03060 NZ_NPMC01000002.1 Protein Homology CDS 51475 51981 . + 0 ID=cds-WP_000084221.1;Parent=gene-CCO57_RS03060;Dbxref=GenBank:WP_000084221.1;Name=WP_000084221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084219.1;locus_tag=CCO57_RS03060;product=phage tail protein;protein_id=WP_000084221.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 51978 52685 . + . ID=gene-CCO57_RS03065;Name=CCO57_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03065;old_locus_tag=CCO57_03065 NZ_NPMC01000002.1 Protein Homology CDS 51978 52685 . + 0 ID=cds-WP_000560083.1;Parent=gene-CCO57_RS03065;Dbxref=GenBank:WP_000560083.1;Name=WP_000560083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560077.1;locus_tag=CCO57_RS03065;product=hypothetical protein;protein_id=WP_000560083.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 52682 53809 . + . ID=gene-CCO57_RS03070;Name=CCO57_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03070;old_locus_tag=CCO57_03070 NZ_NPMC01000002.1 Protein Homology CDS 52682 53809 . + 0 ID=cds-WP_000220203.1;Parent=gene-CCO57_RS03070;Dbxref=GenBank:WP_000220203.1;Name=WP_000220203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748631.1;locus_tag=CCO57_RS03070;product=DUF2586 domain-containing protein;protein_id=WP_000220203.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 53806 54261 . + . ID=gene-CCO57_RS03075;Name=CCO57_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03075;old_locus_tag=CCO57_03075 NZ_NPMC01000002.1 Protein Homology CDS 53806 54261 . + 0 ID=cds-WP_000166743.1;Parent=gene-CCO57_RS03075;Dbxref=GenBank:WP_000166743.1;Name=WP_000166743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044254.1;locus_tag=CCO57_RS03075;product=phage protein;protein_id=WP_000166743.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 54271 54564 . + . ID=gene-CCO57_RS03080;Name=CCO57_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03080;old_locus_tag=CCO57_03080 NZ_NPMC01000002.1 Protein Homology CDS 54271 54564 . + 0 ID=cds-WP_001154425.1;Parent=gene-CCO57_RS03080;Dbxref=GenBank:WP_001154425.1;Name=WP_001154425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001154425.1;locus_tag=CCO57_RS03080;product=phage holin family protein;protein_id=WP_001154425.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 54561 54902 . + . ID=gene-CCO57_RS03085;Name=CCO57_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03085;old_locus_tag=CCO57_03085 NZ_NPMC01000002.1 Protein Homology CDS 54561 54902 . + 0 ID=cds-WP_000175560.1;Parent=gene-CCO57_RS03085;Dbxref=GenBank:WP_000175560.1;Name=WP_000175560.1;Ontology_term=GO:0006508,GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=CCO57_RS03085;product=M15 family metallopeptidase;protein_id=WP_000175560.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 54902 55234 . + . ID=gene-CCO57_RS03090;Name=CCO57_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03090;old_locus_tag=CCO57_03090 NZ_NPMC01000002.1 Protein Homology CDS 54902 55234 . + 0 ID=cds-WP_094914807.1;Parent=gene-CCO57_RS03090;Dbxref=GenBank:WP_094914807.1;Name=WP_094914807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376378.1;locus_tag=CCO57_RS03090;product=hypothetical protein;protein_id=WP_094914807.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 55206 55394 . + . ID=gene-CCO57_RS24485;Name=CCO57_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24485;old_locus_tag=CCO57_03095 NZ_NPMC01000002.1 Protein Homology CDS 55206 55394 . + 0 ID=cds-WP_001270303.1;Parent=gene-CCO57_RS24485;Dbxref=GenBank:WP_001270303.1;Name=WP_001270303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669961.1;locus_tag=CCO57_RS24485;product=hypothetical protein;protein_id=WP_001270303.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 55381 55638 . + . ID=gene-CCO57_RS03100;Name=CCO57_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03100;old_locus_tag=CCO57_03100 NZ_NPMC01000002.1 Protein Homology CDS 55381 55638 . + 0 ID=cds-WP_064163072.1;Parent=gene-CCO57_RS03100;Dbxref=GenBank:WP_064163072.1;Name=WP_064163072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435058.1;locus_tag=CCO57_RS03100;product=putative phage tail assembly chaperone;protein_id=WP_064163072.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 55686 55829 . + . ID=gene-CCO57_RS24910;Name=CCO57_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24910 NZ_NPMC01000002.1 Protein Homology CDS 55686 55829 . + 0 ID=cds-WP_370922079.1;Parent=gene-CCO57_RS24910;Dbxref=GenBank:WP_370922079.1;Name=WP_370922079.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046438.2;locus_tag=CCO57_RS24910;product=DUF6890 family protein;protein_id=WP_370922079.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 55826 57796 . + . ID=gene-CCO57_RS03105;Name=CCO57_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03105;old_locus_tag=CCO57_03105 NZ_NPMC01000002.1 Protein Homology CDS 55826 57796 . + 0 ID=cds-WP_094914808.1;Parent=gene-CCO57_RS03105;Dbxref=GenBank:WP_094914808.1;Name=WP_094914808.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000811087.1;locus_tag=CCO57_RS03105;product=phage tail tape measure protein;protein_id=WP_094914808.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 57793 58122 . + . ID=gene-CCO57_RS03110;Name=CCO57_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03110;old_locus_tag=CCO57_03110 NZ_NPMC01000002.1 Protein Homology CDS 57793 58122 . + 0 ID=cds-WP_001002797.1;Parent=gene-CCO57_RS03110;Dbxref=GenBank:WP_001002797.1;Name=WP_001002797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289823.1;locus_tag=CCO57_RS03110;product=DUF2590 family protein;protein_id=WP_001002797.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 58119 59303 . + . ID=gene-CCO57_RS03115;Name=CCO57_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03115;old_locus_tag=CCO57_03115 NZ_NPMC01000002.1 Protein Homology CDS 58119 59303 . + 0 ID=cds-WP_064163069.1;Parent=gene-CCO57_RS03115;Dbxref=GenBank:WP_064163069.1;Name=WP_064163069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507090.1;locus_tag=CCO57_RS03115;product=baseplate J/gp47 family protein;protein_id=WP_064163069.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 59296 59883 . + . ID=gene-CCO57_RS03120;Name=CCO57_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03120;old_locus_tag=CCO57_03120 NZ_NPMC01000002.1 Protein Homology CDS 59296 59883 . + 0 ID=cds-WP_001001824.1;Parent=gene-CCO57_RS03120;Dbxref=GenBank:WP_001001824.1;Name=WP_001001824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006772868.1;locus_tag=CCO57_RS03120;product=phage tail protein;protein_id=WP_001001824.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 59893 62001 . + . ID=gene-CCO57_RS24915;Name=CCO57_RS24915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24915;old_locus_tag=CCO57_03125 NZ_NPMC01000002.1 Protein Homology CDS 59893 62001 . + 0 ID=cds-WP_094914809.1;Parent=gene-CCO57_RS24915;Dbxref=GenBank:WP_094914809.1;Name=WP_094914809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664435.1;locus_tag=CCO57_RS24915;product=phage tail protein;protein_id=WP_094914809.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 62014 62568 . + . ID=gene-CCO57_RS03130;Name=CCO57_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03130;old_locus_tag=CCO57_03130 NZ_NPMC01000002.1 Protein Homology CDS 62014 62568 . + 0 ID=cds-WP_094914810.1;Parent=gene-CCO57_RS03130;Dbxref=GenBank:WP_094914810.1;Name=WP_094914810.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000122990.1;locus_tag=CCO57_RS03130;product=tail fiber assembly protein;protein_id=WP_094914810.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 62558 63283 . + . ID=gene-CCO57_RS03135;Name=CCO57_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03135;old_locus_tag=CCO57_03135 NZ_NPMC01000002.1 Protein Homology CDS 62558 63283 . + 0 ID=cds-WP_000267951.1;Parent=gene-CCO57_RS03135;Dbxref=GenBank:WP_000267951.1;Name=WP_000267951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000267957.1;locus_tag=CCO57_RS03135;product=hypothetical protein;protein_id=WP_000267951.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 63255 63800 . + . ID=gene-CCO57_RS03140;Name=CCO57_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03140;old_locus_tag=CCO57_03140 NZ_NPMC01000002.1 Protein Homology CDS 63255 63800 . + 0 ID=cds-WP_000200792.1;Parent=gene-CCO57_RS03140;Dbxref=GenBank:WP_000200792.1;Name=WP_000200792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200792.1;locus_tag=CCO57_RS03140;product=hypothetical protein;protein_id=WP_000200792.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 63800 65503 . + . ID=gene-CCO57_RS03145;Name=CCO57_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03145;old_locus_tag=CCO57_03145 NZ_NPMC01000002.1 Protein Homology CDS 63800 65503 . + 0 ID=cds-WP_094914811.1;Parent=gene-CCO57_RS03145;Dbxref=GenBank:WP_094914811.1;Name=WP_094914811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534868.1;locus_tag=CCO57_RS03145;product=hypothetical protein;protein_id=WP_094914811.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 66092 66253 . - . ID=gene-CCO57_RS24285;Name=CCO57_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24285 NZ_NPMC01000002.1 Protein Homology CDS 66092 66253 . - 0 ID=cds-WP_001128281.1;Parent=gene-CCO57_RS24285;Dbxref=GenBank:WP_001128281.1;Name=WP_001128281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001128281.1;locus_tag=CCO57_RS24285;product=hypothetical protein;protein_id=WP_001128281.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 66475 66550 . - . ID=gene-CCO57_RS03155;Name=CCO57_RS03155;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS03155;old_locus_tag=CCO57_03155 NZ_NPMC01000002.1 tRNAscan-SE tRNA 66475 66550 . - . ID=rna-CCO57_RS03155;Parent=gene-CCO57_RS03155;anticodon=(pos:complement(66515..66517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS03155;product=tRNA-Ile NZ_NPMC01000002.1 tRNAscan-SE exon 66475 66550 . - . ID=exon-CCO57_RS03155-1;Parent=rna-CCO57_RS03155;anticodon=(pos:complement(66515..66517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS03155;product=tRNA-Ile NZ_NPMC01000002.1 RefSeq gene 66676 67182 . + . ID=gene-CCO57_RS03160;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=CCO57_RS03160;old_locus_tag=CCO57_03160 NZ_NPMC01000002.1 Protein Homology CDS 66676 67182 . + 0 ID=cds-WP_000237776.1;Parent=gene-CCO57_RS03160;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=CCO57_RS03160;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 67306 69288 . - . ID=gene-CCO57_RS03165;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CCO57_RS03165;old_locus_tag=CCO57_03165 NZ_NPMC01000002.1 Protein Homology CDS 67306 69288 . - 0 ID=cds-WP_001120159.1;Parent=gene-CCO57_RS03165;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=CCO57_RS03165;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 69303 71048 . - . ID=gene-CCO57_RS03170;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CCO57_RS03170;old_locus_tag=CCO57_03170 NZ_NPMC01000002.1 Protein Homology CDS 69303 71048 . - 0 ID=cds-WP_000918862.1;Parent=gene-CCO57_RS03170;Dbxref=GenBank:WP_000918862.1;Name=WP_000918862.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=CCO57_RS03170;product=DNA primase;protein_id=WP_000918862.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 71284 71499 . - . ID=gene-CCO57_RS03175;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CCO57_RS03175;old_locus_tag=CCO57_03175 NZ_NPMC01000002.1 Protein Homology CDS 71284 71499 . - 0 ID=cds-WP_001144069.1;Parent=gene-CCO57_RS03175;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=CCO57_RS03175;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 71727 72740 . + . ID=gene-CCO57_RS03180;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CCO57_RS03180;old_locus_tag=CCO57_03180 NZ_NPMC01000002.1 Protein Homology CDS 71727 72740 . + 0 ID=cds-WP_001264387.1;Parent=gene-CCO57_RS03180;Dbxref=GenBank:WP_001264387.1;Name=WP_001264387.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=CCO57_RS03180;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264387.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 72864 72926 . - . ID=gene-CCO57_RS24505;Name=CCO57_RS24505;end_range=72926,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24505;partial=true;pseudo=true;start_range=.,72864 NZ_NPMC01000002.1 Protein Homology CDS 72864 72926 . - 0 ID=cds-CCO57_RS24505;Parent=gene-CCO57_RS24505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=72926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=CCO57_RS24505;partial=true;product=hypothetical protein;pseudo=true;start_range=.,72864;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 72964 73581 . - . ID=gene-CCO57_RS03185;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CCO57_RS03185;old_locus_tag=CCO57_03185 NZ_NPMC01000002.1 Protein Homology CDS 72964 73581 . - 0 ID=cds-WP_001272785.1;Parent=gene-CCO57_RS03185;Dbxref=GenBank:WP_001272785.1;Name=WP_001272785.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272785.1;locus_tag=CCO57_RS03185;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272785.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 73688 74047 . + . ID=gene-CCO57_RS03190;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CCO57_RS03190;old_locus_tag=CCO57_03190 NZ_NPMC01000002.1 Protein Homology CDS 73688 74047 . + 0 ID=cds-WP_000355776.1;Parent=gene-CCO57_RS03190;Dbxref=GenBank:WP_000355776.1;Name=WP_000355776.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=CCO57_RS03190;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_000355776.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 74145 74966 . + . ID=gene-CCO57_RS03195;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=CCO57_RS03195;old_locus_tag=CCO57_03195 NZ_NPMC01000002.1 Protein Homology CDS 74145 74966 . + 0 ID=cds-WP_001281933.1;Parent=gene-CCO57_RS03195;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=CCO57_RS03195;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 74965 75049 . - . ID=gene-CCO57_RS24920;Name=CCO57_RS24920;end_range=75049,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24920;partial=true;pseudo=true;start_range=.,74965 NZ_NPMC01000002.1 Protein Homology CDS 74965 75049 . - 0 ID=cds-CCO57_RS24920;Parent=gene-CCO57_RS24920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=75049,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO57_RS24920;partial=true;product=hypothetical protein;pseudo=true;start_range=.,74965;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 75070 76311 . - . ID=gene-CCO57_RS03200;Name=CCO57_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03200;old_locus_tag=CCO57_03200 NZ_NPMC01000002.1 Protein Homology CDS 75070 76311 . - 0 ID=cds-WP_000708458.1;Parent=gene-CCO57_RS03200;Dbxref=GenBank:WP_000708458.1;Name=WP_000708458.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=CCO57_RS03200;product=multifunctional CCA addition/repair protein;protein_id=WP_000708458.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 76374 76988 . - . ID=gene-CCO57_RS03205;Name=CCO57_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03205;old_locus_tag=CCO57_03205 NZ_NPMC01000002.1 Protein Homology CDS 76374 76988 . - 0 ID=cds-WP_001125342.1;Parent=gene-CCO57_RS03205;Dbxref=GenBank:WP_001125342.1;Name=WP_001125342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=CCO57_RS03205;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125342.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 77230 78531 . + . ID=gene-CCO57_RS03210;Name=CCO57_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03210;old_locus_tag=CCO57_03210 NZ_NPMC01000002.1 Protein Homology CDS 77230 78531 . + 0 ID=cds-WP_094914813.1;Parent=gene-CCO57_RS03210;Dbxref=GenBank:WP_094914813.1;Name=WP_094914813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=CCO57_RS03210;product=inorganic triphosphatase;protein_id=WP_094914813.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 78649 81492 . + . ID=gene-CCO57_RS03215;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=CCO57_RS03215;old_locus_tag=CCO57_03215 NZ_NPMC01000002.1 Protein Homology CDS 78649 81492 . + 0 ID=cds-WP_000188316.1;Parent=gene-CCO57_RS03215;Dbxref=GenBank:WP_000188316.1;Name=WP_000188316.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=CCO57_RS03215;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_000188316.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 81540 82973 . + . ID=gene-CCO57_RS03220;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=CCO57_RS03220;old_locus_tag=CCO57_03220 NZ_NPMC01000002.1 Protein Homology CDS 81540 82973 . + 0 ID=cds-WP_000867682.1;Parent=gene-CCO57_RS03220;Dbxref=GenBank:WP_000867682.1;Name=WP_000867682.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=CCO57_RS03220;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867682.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 83133 83192 . - . ID=gene-CCO57_RS24390;Name=CCO57_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24390 NZ_NPMC01000002.1 Protein Homology CDS 83133 83192 . - 0 ID=cds-WP_111754053.1;Parent=gene-CCO57_RS24390;Dbxref=GenBank:WP_111754053.1;Name=WP_111754053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=CCO57_RS24390;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_111754053.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 83431 85110 . - . ID=gene-CCO57_RS03230;Name=CCO57_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03230;old_locus_tag=CCO57_03230 NZ_NPMC01000002.1 Protein Homology CDS 83431 85110 . - 0 ID=cds-WP_000342876.1;Parent=gene-CCO57_RS03230;Dbxref=GenBank:WP_000342876.1;Name=WP_000342876.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=CCO57_RS03230;product=flotillin family protein;protein_id=WP_000342876.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 85129 85749 . - . ID=gene-CCO57_RS03235;Name=CCO57_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03235;old_locus_tag=CCO57_03235 NZ_NPMC01000002.1 Protein Homology CDS 85129 85749 . - 0 ID=cds-WP_000171743.1;Parent=gene-CCO57_RS03235;Dbxref=GenBank:WP_000171743.1;Name=WP_000171743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=CCO57_RS03235;product=OB-fold-containig protein;protein_id=WP_000171743.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 86007 86216 . + . ID=gene-CCO57_RS03240;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=CCO57_RS03240;old_locus_tag=CCO57_03240 NZ_NPMC01000002.1 Protein Homology CDS 86007 86216 . + 0 ID=cds-WP_000928927.1;Parent=gene-CCO57_RS03240;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=CCO57_RS03240;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 86290 86586 . - . ID=gene-CCO57_RS03245;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=CCO57_RS03245;old_locus_tag=CCO57_03245 NZ_NPMC01000002.1 Protein Homology CDS 86290 86586 . - 0 ID=cds-WP_000566824.1;Parent=gene-CCO57_RS03245;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=CCO57_RS03245;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11 NZ_NPMC01000002.1 cmsearch riboswitch 86719 86917 . + . ID=id-NZ_NPMC01000002.1:86719..86917;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMC01000002.1 RefSeq gene 87023 87676 . + . ID=gene-CCO57_RS03250;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=CCO57_RS03250;old_locus_tag=CCO57_03250 NZ_NPMC01000002.1 Protein Homology CDS 87023 87676 . + 0 ID=cds-WP_001076978.1;Parent=gene-CCO57_RS03250;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=CCO57_RS03250;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 87847 88524 . - . ID=gene-CCO57_RS03255;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=CCO57_RS03255;old_locus_tag=CCO57_03255 NZ_NPMC01000002.1 Protein Homology CDS 87847 88524 . - 0 ID=cds-WP_000345576.1;Parent=gene-CCO57_RS03255;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=CCO57_RS03255;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 88539 89210 . - . ID=gene-CCO57_RS03260;Name=CCO57_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03260;old_locus_tag=CCO57_03260 NZ_NPMC01000002.1 Protein Homology CDS 88539 89210 . - 0 ID=cds-WP_094914815.1;Parent=gene-CCO57_RS03260;Dbxref=GenBank:WP_094914815.1;Name=WP_094914815.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=CCO57_RS03260;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_094914815.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 89230 91026 . - . ID=gene-CCO57_RS03265;Name=CCO57_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03265;old_locus_tag=CCO57_03265 NZ_NPMC01000002.1 Protein Homology CDS 89230 91026 . - 0 ID=cds-WP_000460265.1;Parent=gene-CCO57_RS03265;Dbxref=GenBank:WP_000460265.1;Name=WP_000460265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=CCO57_RS03265;product=aryl-sulfate sulfotransferase;protein_id=WP_000460265.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 91426 91602 . + . ID=gene-CCO57_RS24785;Name=CCO57_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24785;old_locus_tag=CCO57_03270 NZ_NPMC01000002.1 Protein Homology CDS 91426 91602 . + 0 ID=cds-WP_000469257.1;Parent=gene-CCO57_RS24785;Dbxref=GenBank:WP_000469257.1;Name=WP_000469257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=CCO57_RS24785;product=hypothetical protein;protein_id=WP_000469257.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 91669 92442 . - . ID=gene-CCO57_RS03275;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=CCO57_RS03275;old_locus_tag=CCO57_03275 NZ_NPMC01000002.1 Protein Homology CDS 91669 92442 . - 0 ID=cds-WP_000115874.1;Parent=gene-CCO57_RS03275;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=CCO57_RS03275;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 92583 93371 . + . ID=gene-CCO57_RS03280;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=CCO57_RS03280;old_locus_tag=CCO57_03280 NZ_NPMC01000002.1 Protein Homology CDS 92583 93371 . + 0 ID=cds-WP_001520560.1;Parent=gene-CCO57_RS03280;Dbxref=GenBank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=CCO57_RS03280;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001520560.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 93433 94596 . - . ID=gene-CCO57_RS03285;Name=CCO57_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03285;old_locus_tag=CCO57_03285 NZ_NPMC01000002.1 Protein Homology CDS 93433 94596 . - 0 ID=cds-WP_000442834.1;Parent=gene-CCO57_RS03285;Dbxref=GenBank:WP_000442834.1;Name=WP_000442834.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=CCO57_RS03285;product=glutathionylspermidine synthase family protein;protein_id=WP_000442834.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 94602 95273 . - . ID=gene-CCO57_RS03290;Name=CCO57_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03290;old_locus_tag=CCO57_03290 NZ_NPMC01000002.1 Protein Homology CDS 94602 95273 . - 0 ID=cds-WP_000831528.1;Parent=gene-CCO57_RS03290;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=CCO57_RS03290;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 95486 96961 . - . ID=gene-CCO57_RS03300;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=CCO57_RS03300;old_locus_tag=CCO57_03300 NZ_NPMC01000002.1 Protein Homology CDS 95486 96961 . - 0 ID=cds-WP_015899378.1;Parent=gene-CCO57_RS03300;Dbxref=GenBank:WP_015899378.1;Name=WP_015899378.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=CCO57_RS03300;product=outer membrane channel protein TolC;protein_id=WP_015899378.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 97162 97794 . + . ID=gene-CCO57_RS03305;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=CCO57_RS03305;old_locus_tag=CCO57_03305 NZ_NPMC01000002.1 Protein Homology CDS 97162 97794 . + 0 ID=cds-WP_001231950.1;Parent=gene-CCO57_RS03305;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=CCO57_RS03305;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 97791 98213 . + . ID=gene-CCO57_RS03310;Name=CCO57_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03310;old_locus_tag=CCO57_03310 NZ_NPMC01000002.1 Protein Homology CDS 97791 98213 . + 0 ID=cds-WP_000833404.1;Parent=gene-CCO57_RS03310;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=CCO57_RS03310;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 98238 99065 . + . ID=gene-CCO57_RS03315;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=CCO57_RS03315;old_locus_tag=CCO57_03315 NZ_NPMC01000002.1 Protein Homology CDS 98238 99065 . + 0 ID=cds-WP_000444735.1;Parent=gene-CCO57_RS03315;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=CCO57_RS03315;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 99065 99646 . + . ID=gene-CCO57_RS03320;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=CCO57_RS03320;old_locus_tag=CCO57_03320 NZ_NPMC01000002.1 Protein Homology CDS 99065 99646 . + 0 ID=cds-WP_000105725.1;Parent=gene-CCO57_RS03320;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=CCO57_RS03320;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 99674 101566 . + . ID=gene-CCO57_RS03325;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CCO57_RS03325;old_locus_tag=CCO57_03325 NZ_NPMC01000002.1 Protein Homology CDS 99674 101566 . + 0 ID=cds-WP_000195318.1;Parent=gene-CCO57_RS03325;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=CCO57_RS03325;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 101691 102005 . - . ID=gene-CCO57_RS03330;Name=CCO57_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03330;old_locus_tag=CCO57_03330 NZ_NPMC01000002.1 Protein Homology CDS 101691 102005 . - 0 ID=cds-WP_000958587.1;Parent=gene-CCO57_RS03330;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=CCO57_RS03330;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 102037 102618 . - . ID=gene-CCO57_RS03335;Name=CCO57_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03335;old_locus_tag=CCO57_03335 NZ_NPMC01000002.1 Protein Homology CDS 102037 102618 . - 0 ID=cds-WP_000065416.1;Parent=gene-CCO57_RS03335;Dbxref=GenBank:WP_000065416.1;Name=WP_000065416.1;Ontology_term=GO:0008753,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=CCO57_RS03335;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 102725 104074 . - . ID=gene-CCO57_RS03340;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=CCO57_RS03340;old_locus_tag=CCO57_03340 NZ_NPMC01000002.1 Protein Homology CDS 102725 104074 . - 0 ID=cds-WP_000779333.1;Parent=gene-CCO57_RS03340;Dbxref=GenBank:WP_000779333.1;Name=WP_000779333.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=CCO57_RS03340;product=quorum sensing histidine kinase QseC;protein_id=WP_000779333.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 104071 104730 . - . ID=gene-CCO57_RS03345;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=CCO57_RS03345;old_locus_tag=CCO57_03345 NZ_NPMC01000002.1 Protein Homology CDS 104071 104730 . - 0 ID=cds-WP_001221574.1;Parent=gene-CCO57_RS03345;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=CCO57_RS03345;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 104882 105274 . + . ID=gene-CCO57_RS03350;Name=CCO57_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03350;old_locus_tag=CCO57_03350 NZ_NPMC01000002.1 Protein Homology CDS 104882 105274 . + 0 ID=cds-WP_000731553.1;Parent=gene-CCO57_RS03350;Dbxref=GenBank:WP_000731553.1;Name=WP_000731553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024544.1;locus_tag=CCO57_RS03350;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731553.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 105404 107662 . + . ID=gene-CCO57_RS03355;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CCO57_RS03355;old_locus_tag=CCO57_03355 NZ_NPMC01000002.1 Protein Homology CDS 105404 107662 . + 0 ID=cds-WP_001281853.1;Parent=gene-CCO57_RS03355;Dbxref=GenBank:WP_001281853.1;Name=WP_001281853.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=CCO57_RS03355;product=DNA topoisomerase IV subunit A;protein_id=WP_001281853.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 107919 108656 . + . ID=gene-CCO57_RS03360;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=CCO57_RS03360;old_locus_tag=CCO57_03360 NZ_NPMC01000002.1 Protein Homology CDS 107919 108656 . + 0 ID=cds-WP_000965733.1;Parent=gene-CCO57_RS03360;Dbxref=GenBank:WP_000965733.1;Name=WP_000965733.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=CCO57_RS03360;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965733.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 108730 110142 . + . ID=gene-CCO57_RS03365;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=CCO57_RS03365;old_locus_tag=CCO57_03365 NZ_NPMC01000002.1 Protein Homology CDS 108730 110142 . + 0 ID=cds-WP_000010658.1;Parent=gene-CCO57_RS03365;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=CCO57_RS03365;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 110163 110816 . + . ID=gene-CCO57_RS03370;Name=CCO57_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03370;old_locus_tag=CCO57_03370 NZ_NPMC01000002.1 GeneMarkS-2+ CDS 110163 110816 . + 0 ID=cds-WP_024138927.1;Parent=gene-CCO57_RS03370;Dbxref=GenBank:WP_024138927.1;Name=WP_024138927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS03370;product=hypothetical protein;protein_id=WP_024138927.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 110837 111028 . + . ID=gene-CCO57_RS24510;Name=CCO57_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24510;old_locus_tag=CCO57_03375 NZ_NPMC01000002.1 GeneMarkS-2+ CDS 110837 111028 . + 0 ID=cds-WP_043942885.1;Parent=gene-CCO57_RS24510;Dbxref=GenBank:WP_043942885.1;Name=WP_043942885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24510;product=hypothetical protein;protein_id=WP_043942885.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 111728 112633 . + . ID=gene-CCO57_RS24835;Name=CCO57_RS24835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24835;pseudo=true NZ_NPMC01000002.1 Protein Homology CDS 111728 112633 . + 0 ID=cds-CCO57_RS24835;Parent=gene-CCO57_RS24835;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269658.1;locus_tag=CCO57_RS24835;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 112649 114073 . + . ID=gene-CCO57_RS03385;Name=CCO57_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03385;old_locus_tag=CCO57_03385 NZ_NPMC01000002.1 Protein Homology CDS 112649 114073 . + 0 ID=cds-WP_061377612.1;Parent=gene-CCO57_RS03385;Dbxref=GenBank:WP_061377612.1;Name=WP_061377612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384560.1;locus_tag=CCO57_RS03385;product=hypothetical protein;protein_id=WP_061377612.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 114138 115559 . + . ID=gene-CCO57_RS03390;Name=CCO57_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03390;old_locus_tag=CCO57_03390 NZ_NPMC01000002.1 Protein Homology CDS 114138 115559 . + 0 ID=cds-WP_094914816.1;Parent=gene-CCO57_RS03390;Dbxref=GenBank:WP_094914816.1;Name=WP_094914816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528005.1;locus_tag=CCO57_RS03390;product=DUF4459 domain-containing protein;protein_id=WP_094914816.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 115694 117865 . + . ID=gene-CCO57_RS03395;Name=CCO57_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03395;old_locus_tag=CCO57_03395 NZ_NPMC01000002.1 Protein Homology CDS 115694 117865 . + 0 ID=cds-WP_001274469.1;Parent=gene-CCO57_RS03395;Dbxref=GenBank:WP_001274469.1;Name=WP_001274469.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=CCO57_RS03395;product=YgiQ family radical SAM protein;protein_id=WP_001274469.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 118001 118456 . - . ID=gene-CCO57_RS03400;Name=CCO57_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03400;old_locus_tag=CCO57_03400 NZ_NPMC01000002.1 Protein Homology CDS 118001 118456 . - 0 ID=cds-WP_001527932.1;Parent=gene-CCO57_RS03400;Dbxref=GenBank:WP_001527932.1;Name=WP_001527932.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=CCO57_RS03400;product=HIT family protein;protein_id=WP_001527932.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 118500 119985 . - . ID=gene-CCO57_RS03405;Name=CCO57_RS03405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS03405;old_locus_tag=CCO57_03405;pseudo=true NZ_NPMC01000002.1 Protein Homology CDS 118500 119985 . - 0 ID=cds-CCO57_RS03405;Parent=gene-CCO57_RS03405;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=CCO57_RS03405;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 120151 120978 . - . ID=gene-CCO57_RS03410;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=CCO57_RS03410;old_locus_tag=CCO57_03410 NZ_NPMC01000002.1 Protein Homology CDS 120151 120978 . - 0 ID=cds-WP_000013104.1;Parent=gene-CCO57_RS03410;Dbxref=GenBank:WP_000013104.1;Name=WP_000013104.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=CCO57_RS03410;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013104.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 121084 122247 . - . ID=gene-CCO57_RS03415;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=CCO57_RS03415;old_locus_tag=CCO57_03415 NZ_NPMC01000002.1 Protein Homology CDS 121084 122247 . - 0 ID=cds-WP_001058722.1;Parent=gene-CCO57_RS03415;Dbxref=GenBank:WP_001058722.1;Name=WP_001058722.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=CCO57_RS03415;product=alcohol dehydrogenase;protein_id=WP_001058722.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 122440 123339 . + . ID=gene-CCO57_RS03420;Name=CCO57_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03420;old_locus_tag=CCO57_03420 NZ_NPMC01000002.1 Protein Homology CDS 122440 123339 . + 0 ID=cds-WP_140428171.1;Parent=gene-CCO57_RS03420;Dbxref=GenBank:WP_140428171.1;Name=WP_140428171.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=CCO57_RS03420;product=AraC family transcriptional regulator;protein_id=WP_140428171.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 123403 124062 . - . ID=gene-CCO57_RS03425;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=CCO57_RS03425;old_locus_tag=CCO57_03425 NZ_NPMC01000002.1 Protein Homology CDS 123403 124062 . - 0 ID=cds-WP_000268441.1;Parent=gene-CCO57_RS03425;Dbxref=GenBank:WP_000268441.1;Name=WP_000268441.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=CCO57_RS03425;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268441.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 124202 125389 . - . ID=gene-CCO57_RS03430;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CCO57_RS03430;old_locus_tag=CCO57_03430 NZ_NPMC01000002.1 Protein Homology CDS 124202 125389 . - 0 ID=cds-WP_000130270.1;Parent=gene-CCO57_RS03430;Dbxref=GenBank:WP_000130270.1;Name=WP_000130270.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=CCO57_RS03430;product=cystathionine beta-lyase;protein_id=WP_000130270.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 125641 126375 . + . ID=gene-CCO57_RS03440;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=CCO57_RS03440;old_locus_tag=CCO57_03440 NZ_NPMC01000002.1 Protein Homology CDS 125641 126375 . + 0 ID=cds-WP_000527859.1;Parent=gene-CCO57_RS03440;Dbxref=GenBank:WP_000527859.1;Name=WP_000527859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=CCO57_RS03440;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527859.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 126382 126807 . + . ID=gene-CCO57_RS03445;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=CCO57_RS03445;old_locus_tag=CCO57_03445 NZ_NPMC01000002.1 Protein Homology CDS 126382 126807 . + 0 ID=cds-WP_001251476.1;Parent=gene-CCO57_RS03445;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=CCO57_RS03445;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 126920 127804 . - . ID=gene-CCO57_RS03450;Name=CCO57_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03450;old_locus_tag=CCO57_03450 NZ_NPMC01000002.1 Protein Homology CDS 126920 127804 . - 0 ID=cds-WP_000019037.1;Parent=gene-CCO57_RS03450;Dbxref=GenBank:WP_000019037.1;Name=WP_000019037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=CCO57_RS03450;product=SDR family oxidoreductase;protein_id=WP_000019037.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 127928 128332 . - . ID=gene-CCO57_RS03455;Name=CCO57_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03455;old_locus_tag=CCO57_03455 NZ_NPMC01000002.1 Protein Homology CDS 127928 128332 . - 0 ID=cds-WP_000665657.1;Parent=gene-CCO57_RS03455;Dbxref=GenBank:WP_000665657.1;Name=WP_000665657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=CCO57_RS03455;product=hypothetical protein;protein_id=WP_000665657.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 128319 128729 . - . ID=gene-CCO57_RS03460;Name=CCO57_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03460;old_locus_tag=CCO57_03460 NZ_NPMC01000002.1 Protein Homology CDS 128319 128729 . - 0 ID=cds-WP_094914818.1;Parent=gene-CCO57_RS03460;Dbxref=GenBank:WP_094914818.1;Name=WP_094914818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=CCO57_RS03460;product=hypothetical protein;protein_id=WP_094914818.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 128833 129336 . + . ID=gene-CCO57_RS03465;Name=CCO57_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03465;old_locus_tag=CCO57_03465 NZ_NPMC01000002.1 Protein Homology CDS 128833 129336 . + 0 ID=cds-WP_001084409.1;Parent=gene-CCO57_RS03465;Dbxref=GenBank:WP_001084409.1;Name=WP_001084409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=CCO57_RS03465;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001084409.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 129554 130048 . + . ID=gene-CCO57_RS03470;Name=CCO57_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03470;old_locus_tag=CCO57_03470 NZ_NPMC01000002.1 Protein Homology CDS 129554 130048 . + 0 ID=cds-WP_000439335.1;Parent=gene-CCO57_RS03470;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=CCO57_RS03470;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 130355 131998 . + . ID=gene-CCO57_RS03475;Name=CCO57_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03475;old_locus_tag=CCO57_03475 NZ_NPMC01000002.1 Protein Homology CDS 130355 131998 . + 0 ID=cds-WP_001238427.1;Parent=gene-CCO57_RS03475;Dbxref=GenBank:WP_001238427.1;Name=WP_001238427.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=CCO57_RS03475;product=methyl-accepting chemotaxis protein;protein_id=WP_001238427.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 132083 132370 . + . ID=gene-CCO57_RS03480;Name=CCO57_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03480;old_locus_tag=CCO57_03480 NZ_NPMC01000002.1 Protein Homology CDS 132083 132370 . + 0 ID=cds-WP_001059141.1;Parent=gene-CCO57_RS03480;Dbxref=GenBank:WP_001059141.1;Name=WP_001059141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=CCO57_RS03480;product=DUF2623 family protein;protein_id=WP_001059141.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 132560 133678 . + . ID=gene-CCO57_RS03490;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=CCO57_RS03490;old_locus_tag=CCO57_03490 NZ_NPMC01000002.1 Protein Homology CDS 132560 133678 . + 0 ID=cds-WP_000145429.1;Parent=gene-CCO57_RS03490;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=CCO57_RS03490;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 133681 134667 . + . ID=gene-CCO57_RS03495;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=CCO57_RS03495;old_locus_tag=CCO57_03495 NZ_NPMC01000002.1 Protein Homology CDS 133681 134667 . + 0 ID=cds-WP_001081721.1;Parent=gene-CCO57_RS03495;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=CCO57_RS03495;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 134657 135835 . + . ID=gene-CCO57_RS03500;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=CCO57_RS03500;old_locus_tag=CCO57_03500 NZ_NPMC01000002.1 Protein Homology CDS 134657 135835 . + 0 ID=cds-WP_000017678.1;Parent=gene-CCO57_RS03500;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=CCO57_RS03500;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 135832 137535 . + . ID=gene-CCO57_RS03505;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=CCO57_RS03505;old_locus_tag=CCO57_03505 NZ_NPMC01000002.1 Protein Homology CDS 135832 137535 . + 0 ID=cds-WP_000083045.1;Parent=gene-CCO57_RS03505;Dbxref=GenBank:WP_000083045.1;Name=WP_000083045.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=CCO57_RS03505;product=hydrogenase 2 large subunit;protein_id=WP_000083045.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 137535 138029 . + . ID=gene-CCO57_RS03510;Name=CCO57_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03510;old_locus_tag=CCO57_03510 NZ_NPMC01000002.1 Protein Homology CDS 137535 138029 . + 0 ID=cds-WP_001221960.1;Parent=gene-CCO57_RS03510;Dbxref=GenBank:WP_001221960.1;Name=WP_001221960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=CCO57_RS03510;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221960.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 138022 138510 . + . ID=gene-CCO57_RS03515;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=CCO57_RS03515;old_locus_tag=CCO57_03515 NZ_NPMC01000002.1 Protein Homology CDS 138022 138510 . + 0 ID=cds-WP_000004951.1;Parent=gene-CCO57_RS03515;Dbxref=GenBank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=CCO57_RS03515;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 138503 138844 . + . ID=gene-CCO57_RS03520;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO57_RS03520;old_locus_tag=CCO57_03520 NZ_NPMC01000002.1 Protein Homology CDS 138503 138844 . + 0 ID=cds-WP_000544945.1;Parent=gene-CCO57_RS03520;Dbxref=GenBank:WP_000544945.1;Name=WP_000544945.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=CCO57_RS03520;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 138872 139120 . + . ID=gene-CCO57_RS03525;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=CCO57_RS03525;old_locus_tag=CCO57_03525 NZ_NPMC01000002.1 Protein Homology CDS 138872 139120 . + 0 ID=cds-WP_000334890.1;Parent=gene-CCO57_RS03525;Dbxref=GenBank:WP_000334890.1;Name=WP_000334890.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=CCO57_RS03525;product=hydrogenase maturation factor HybG;protein_id=WP_000334890.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 139196 140248 . + . ID=gene-CCO57_RS03530;Name=CCO57_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03530;old_locus_tag=CCO57_03530 NZ_NPMC01000002.1 Protein Homology CDS 139196 140248 . + 0 ID=cds-WP_001032024.1;Parent=gene-CCO57_RS03530;Dbxref=GenBank:WP_001032024.1;Name=WP_001032024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=CCO57_RS03530;product=ABC transporter substrate-binding protein;protein_id=WP_001032024.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 140248 140958 . + . ID=gene-CCO57_RS03535;Name=CCO57_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03535;old_locus_tag=CCO57_03535 NZ_NPMC01000002.1 Protein Homology CDS 140248 140958 . + 0 ID=cds-WP_001613763.1;Parent=gene-CCO57_RS03535;Dbxref=GenBank:WP_001613763.1;Name=WP_001613763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=CCO57_RS03535;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001613763.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 141026 141892 . - . ID=gene-CCO57_RS03540;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=CCO57_RS03540;old_locus_tag=CCO57_03540 NZ_NPMC01000002.1 Protein Homology CDS 141026 141892 . - 0 ID=cds-WP_000774852.1;Parent=gene-CCO57_RS03540;Dbxref=GenBank:WP_000774852.1;Name=WP_000774852.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=CCO57_RS03540;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774852.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 142119 143975 . + . ID=gene-CCO57_RS03545;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=CCO57_RS03545;old_locus_tag=CCO57_03545 NZ_NPMC01000002.1 Protein Homology CDS 142119 143975 . + 0 ID=cds-WP_000033688.1;Parent=gene-CCO57_RS03545;Dbxref=GenBank:WP_000033688.1;Name=WP_000033688.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=CCO57_RS03545;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033688.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 144645 145700 . + . ID=gene-CCO57_RS03555;Name=CCO57_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03555;old_locus_tag=CCO57_03555 NZ_NPMC01000002.1 Protein Homology CDS 144645 145700 . + 0 ID=cds-WP_000475255.1;Parent=gene-CCO57_RS03555;Dbxref=GenBank:WP_000475255.1;Name=WP_000475255.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=CCO57_RS03555;product=methyl-accepting chemotaxis protein;protein_id=WP_000475255.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 146000 147412 . - . ID=gene-CCO57_RS03560;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=CCO57_RS03560;old_locus_tag=CCO57_03560 NZ_NPMC01000002.1 Protein Homology CDS 146000 147412 . - 0 ID=cds-WP_000190182.1;Parent=gene-CCO57_RS03560;Dbxref=GenBank:WP_000190182.1;Name=WP_000190182.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=CCO57_RS03560;product=glucuronate isomerase;protein_id=WP_000190182.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 147424 148896 . - . ID=gene-CCO57_RS03565;Name=CCO57_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03565;old_locus_tag=CCO57_03565 NZ_NPMC01000002.1 Protein Homology CDS 147424 148896 . - 0 ID=cds-WP_000437125.1;Parent=gene-CCO57_RS03565;Dbxref=GenBank:WP_000437125.1;Name=WP_000437125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=CCO57_RS03565;product=fructuronate reductase;protein_id=WP_000437125.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 149007 150191 . - . ID=gene-CCO57_RS03570;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=CCO57_RS03570;old_locus_tag=CCO57_03570 NZ_NPMC01000002.1 Protein Homology CDS 149007 150191 . - 0 ID=cds-WP_094914819.1;Parent=gene-CCO57_RS03570;Dbxref=GenBank:WP_094914819.1;Name=WP_094914819.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=CCO57_RS03570;product=mannonate dehydratase;protein_id=WP_094914819.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 150596 151900 . + . ID=gene-CCO57_RS03580;Name=CCO57_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03580;old_locus_tag=CCO57_03580 NZ_NPMC01000002.1 Protein Homology CDS 150596 151900 . + 0 ID=cds-WP_000784371.1;Parent=gene-CCO57_RS03580;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=CCO57_RS03580;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 151980 153245 . - . ID=gene-CCO57_RS03585;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=CCO57_RS03585;old_locus_tag=CCO57_03585 NZ_NPMC01000002.1 Protein Homology CDS 151980 153245 . - 0 ID=cds-WP_031566616.1;Parent=gene-CCO57_RS03585;Dbxref=GenBank:WP_031566616.1;Name=WP_031566616.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712677.1;locus_tag=CCO57_RS03585;product=glucuronide uptake porin UidC;protein_id=WP_031566616.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 153281 154654 . - . ID=gene-CCO57_RS03590;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=CCO57_RS03590;old_locus_tag=CCO57_03590 NZ_NPMC01000002.1 Protein Homology CDS 153281 154654 . - 0 ID=cds-WP_001075549.1;Parent=gene-CCO57_RS03590;Dbxref=GenBank:WP_001075549.1;Name=WP_001075549.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=CCO57_RS03590;product=glucuronide transporter;protein_id=WP_001075549.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 154651 156462 . - . ID=gene-CCO57_RS03595;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=CCO57_RS03595;old_locus_tag=CCO57_03595 NZ_NPMC01000002.1 Protein Homology CDS 154651 156462 . - 0 ID=cds-WP_000945953.1;Parent=gene-CCO57_RS03595;Dbxref=GenBank:WP_000945953.1;Name=WP_000945953.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000945954.1;locus_tag=CCO57_RS03595;product=beta-glucuronidase;protein_id=WP_000945953.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 156837 157433 . + . ID=gene-CCO57_RS03600;Name=CCO57_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03600;old_locus_tag=CCO57_03600 NZ_NPMC01000002.1 Protein Homology CDS 156837 157433 . + 0 ID=cds-WP_000428463.1;Parent=gene-CCO57_RS03600;Dbxref=GenBank:WP_000428463.1;Name=WP_000428463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000428407.1;locus_tag=CCO57_RS03600;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000428463.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 157746 158624 . + . ID=gene-CCO57_RS03605;Name=CCO57_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03605;old_locus_tag=CCO57_03605 NZ_NPMC01000002.1 Protein Homology CDS 157746 158624 . + 0 ID=cds-WP_000089257.1;Parent=gene-CCO57_RS03605;Dbxref=GenBank:WP_000089257.1;Name=WP_000089257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=CCO57_RS03605;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000089257.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 158663 159586 . + . ID=gene-CCO57_RS03610;Name=CCO57_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03610;old_locus_tag=CCO57_03610 NZ_NPMC01000002.1 Protein Homology CDS 158663 159586 . + 0 ID=cds-WP_000540892.1;Parent=gene-CCO57_RS03610;Dbxref=GenBank:WP_000540892.1;Name=WP_000540892.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=CCO57_RS03610;product=polysaccharide deacetylase family protein;protein_id=WP_000540892.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 160312 160797 . + . ID=gene-CCO57_RS03615;Name=CCO57_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03615;old_locus_tag=CCO57_03615 NZ_NPMC01000002.1 Protein Homology CDS 160312 160797 . + 0 ID=cds-WP_000338753.1;Parent=gene-CCO57_RS03615;Dbxref=GenBank:WP_000338753.1;Name=WP_000338753.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=CCO57_RS03615;product=Hcp family type VI secretion system effector;protein_id=WP_000338753.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 160797 161177 . + . ID=gene-CCO57_RS03620;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=CCO57_RS03620;old_locus_tag=CCO57_03620 NZ_NPMC01000002.1 Protein Homology CDS 160797 161177 . + 0 ID=cds-WP_001543513.1;Parent=gene-CCO57_RS03620;Dbxref=GenBank:WP_001543513.1;Name=WP_001543513.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=CCO57_RS03620;product=anti-adapter protein IraD;protein_id=WP_001543513.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 161313 162797 . - . ID=gene-CCO57_RS03625;Name=CCO57_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03625;old_locus_tag=CCO57_03625 NZ_NPMC01000002.1 Protein Homology CDS 161313 162797 . - 0 ID=cds-WP_031566609.1;Parent=gene-CCO57_RS03625;Dbxref=GenBank:WP_031566609.1;Name=WP_031566609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=CCO57_RS03625;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_031566609.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 162959 164260 . + . ID=gene-CCO57_RS03630;Name=CCO57_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03630;old_locus_tag=CCO57_03630 NZ_NPMC01000002.1 Protein Homology CDS 162959 164260 . + 0 ID=cds-WP_001092825.1;Parent=gene-CCO57_RS03630;Dbxref=GenBank:WP_001092825.1;Name=WP_001092825.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=CCO57_RS03630;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092825.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 164275 164649 . + . ID=gene-CCO57_RS03635;Name=CCO57_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03635;old_locus_tag=CCO57_03635 NZ_NPMC01000002.1 Protein Homology CDS 164275 164649 . + 0 ID=cds-WP_024154915.1;Parent=gene-CCO57_RS03635;Dbxref=GenBank:WP_024154915.1;Name=WP_024154915.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542983.1;locus_tag=CCO57_RS03635;product=cupin domain-containing protein;protein_id=WP_024154915.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 164858 166357 . + . ID=gene-CCO57_RS03640;Name=CCO57_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03640;old_locus_tag=CCO57_03640 NZ_NPMC01000002.1 Protein Homology CDS 164858 166357 . + 0 ID=cds-WP_000475960.1;Parent=gene-CCO57_RS03640;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=CCO57_RS03640;product=APC family permease;protein_id=WP_000475960.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 166335 166892 . + . ID=gene-CCO57_RS03645;Name=CCO57_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03645;old_locus_tag=CCO57_03645 NZ_NPMC01000002.1 Protein Homology CDS 166335 166892 . + 0 ID=cds-WP_000100109.1;Parent=gene-CCO57_RS03645;Dbxref=GenBank:WP_000100109.1;Name=WP_000100109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=CCO57_RS03645;product=DUF3156 family protein;protein_id=WP_000100109.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 166997 167680 . - . ID=gene-CCO57_RS03650;Name=CCO57_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03650;old_locus_tag=CCO57_03650 NZ_NPMC01000002.1 Protein Homology CDS 166997 167680 . - 0 ID=cds-WP_001275356.1;Parent=gene-CCO57_RS03650;Dbxref=GenBank:WP_001275356.1;Name=WP_001275356.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=CCO57_RS03650;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275356.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 168191 169375 . + . ID=gene-CCO57_RS03655;Name=CCO57_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03655;old_locus_tag=CCO57_03655 NZ_NPMC01000002.1 Protein Homology CDS 168191 169375 . + 0 ID=cds-WP_000933446.1;Parent=gene-CCO57_RS03655;Dbxref=GenBank:WP_000933446.1;Name=WP_000933446.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=CCO57_RS03655;product=anaerobic sulfatase maturase;protein_id=WP_000933446.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 169444 171183 . + . ID=gene-CCO57_RS03660;Name=CCO57_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03660;old_locus_tag=CCO57_03660 NZ_NPMC01000002.1 Protein Homology CDS 169444 171183 . + 0 ID=cds-WP_094914820.1;Parent=gene-CCO57_RS03660;Dbxref=GenBank:WP_094914820.1;Name=WP_094914820.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=CCO57_RS03660;product=arylsulfatase;protein_id=WP_094914820.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 171231 172109 . - . ID=gene-CCO57_RS03665;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=CCO57_RS03665;old_locus_tag=CCO57_03665 NZ_NPMC01000002.1 Protein Homology CDS 171231 172109 . - 0 ID=cds-WP_000423178.1;Parent=gene-CCO57_RS03665;Dbxref=GenBank:WP_000423178.1;Name=WP_000423178.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=CCO57_RS03665;product=itaconate degradation transcriptional regulator RipR;protein_id=WP_000423178.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 172201 173043 . + . ID=gene-CCO57_RS03670;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=CCO57_RS03670;old_locus_tag=CCO57_03670 NZ_NPMC01000002.1 Protein Homology CDS 172201 173043 . + 0 ID=cds-WP_001112897.1;Parent=gene-CCO57_RS03670;Dbxref=GenBank:WP_001112897.1;Name=WP_001112897.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=CCO57_RS03670;product=itaconate degradation C-C-lyase RipC;protein_id=WP_001112897.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 173067 173594 . + . ID=gene-CCO57_RS03675;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=CCO57_RS03675;old_locus_tag=CCO57_03675 NZ_NPMC01000002.1 Protein Homology CDS 173067 173594 . + 0 ID=cds-WP_001094307.1;Parent=gene-CCO57_RS03675;Dbxref=GenBank:WP_001094307.1;Name=WP_001094307.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=CCO57_RS03675;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=WP_001094307.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 173619 174944 . + . ID=gene-CCO57_RS03680;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=CCO57_RS03680;old_locus_tag=CCO57_03680 NZ_NPMC01000002.1 Protein Homology CDS 173619 174944 . + 0 ID=cds-WP_023229064.1;Parent=gene-CCO57_RS03680;Dbxref=GenBank:WP_023229064.1;Name=WP_023229064.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=CCO57_RS03680;product=itaconate CoA-transferase RipA/Ict;protein_id=WP_023229064.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 175009 175389 . + . ID=gene-CCO57_RS03685;Name=CCO57_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03685;old_locus_tag=CCO57_03685 NZ_NPMC01000002.1 Protein Homology CDS 175009 175389 . + 0 ID=cds-WP_000582672.1;Parent=gene-CCO57_RS03685;Dbxref=GenBank:WP_000582672.1;Name=WP_000582672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=CCO57_RS03685;product=VOC family protein;protein_id=WP_000582672.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 175548 175623 . - . ID=gene-CCO57_RS03690;Name=CCO57_RS03690;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS03690;old_locus_tag=CCO57_03690 NZ_NPMC01000002.1 tRNAscan-SE tRNA 175548 175623 . - . ID=rna-CCO57_RS03690;Parent=gene-CCO57_RS03690;anticodon=(pos:complement(175588..175590));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS03690;product=tRNA-Phe NZ_NPMC01000002.1 tRNAscan-SE exon 175548 175623 . - . ID=exon-CCO57_RS03690-1;Parent=rna-CCO57_RS03690;anticodon=(pos:complement(175588..175590));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS03690;product=tRNA-Phe NZ_NPMC01000002.1 RefSeq gene 175729 176436 . - . ID=gene-CCO57_RS03695;Name=CCO57_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03695;old_locus_tag=CCO57_03695 NZ_NPMC01000002.1 Protein Homology CDS 175729 176436 . - 0 ID=cds-WP_000234466.1;Parent=gene-CCO57_RS03695;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=CCO57_RS03695;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 176862 178997 . + . ID=gene-CCO57_RS03705;Name=CCO57_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03705;old_locus_tag=CCO57_03705 NZ_NPMC01000002.1 Protein Homology CDS 176862 178997 . + 0 ID=cds-WP_001646210.1;Parent=gene-CCO57_RS03705;Dbxref=GenBank:WP_001646210.1;Name=WP_001646210.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=CCO57_RS03705;product=ornithine decarboxylase;protein_id=WP_001646210.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 179059 180315 . - . ID=gene-CCO57_RS03710;Name=CCO57_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03710;old_locus_tag=CCO57_03710 NZ_NPMC01000002.1 Protein Homology CDS 179059 180315 . - 0 ID=cds-WP_001049804.1;Parent=gene-CCO57_RS03710;Dbxref=GenBank:WP_001049804.1;Name=WP_001049804.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=CCO57_RS03710;product=nucleoside permease;protein_id=WP_001049804.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 180532 181617 . - . ID=gene-CCO57_RS03715;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=CCO57_RS03715;old_locus_tag=CCO57_03715 NZ_NPMC01000002.1 Protein Homology CDS 180532 181617 . - 0 ID=cds-WP_000976289.1;Parent=gene-CCO57_RS03715;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=CCO57_RS03715;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 181730 182005 . - . ID=gene-CCO57_RS03720;Name=CCO57_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03720;old_locus_tag=CCO57_03720 NZ_NPMC01000002.1 Protein Homology CDS 181730 182005 . - 0 ID=cds-WP_000091706.1;Parent=gene-CCO57_RS03720;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=CCO57_RS03720;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 182033 183085 . - . ID=gene-CCO57_RS03725;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CCO57_RS03725;old_locus_tag=CCO57_03725 NZ_NPMC01000002.1 Protein Homology CDS 182033 183085 . - 0 ID=cds-WP_094914821.1;Parent=gene-CCO57_RS03725;Dbxref=GenBank:WP_094914821.1;Name=WP_094914821.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=CCO57_RS03725;product=A/G-specific adenine glycosylase;protein_id=WP_094914821.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 183240 183959 . + . ID=gene-CCO57_RS03735;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CCO57_RS03735;old_locus_tag=CCO57_03735 NZ_NPMC01000002.1 Protein Homology CDS 183240 183959 . + 0 ID=cds-WP_000786890.1;Parent=gene-CCO57_RS03735;Dbxref=GenBank:WP_000786890.1;Name=WP_000786890.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=CCO57_RS03735;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786890.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 183959 184285 . + . ID=gene-CCO57_RS03740;Name=CCO57_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03740;old_locus_tag=CCO57_03740 NZ_NPMC01000002.1 Protein Homology CDS 183959 184285 . + 0 ID=cds-WP_001107559.1;Parent=gene-CCO57_RS03740;Dbxref=GenBank:WP_001107559.1;Name=WP_001107559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=CCO57_RS03740;product=YggL family protein;protein_id=WP_001107559.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 184335 185054 . + . ID=gene-CCO57_RS03745;Name=CCO57_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03745;old_locus_tag=CCO57_03745 NZ_NPMC01000002.1 Protein Homology CDS 184335 185054 . + 0 ID=cds-WP_023262963.1;Parent=gene-CCO57_RS03745;Dbxref=GenBank:WP_023262963.1;Name=WP_023262963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=CCO57_RS03745;product=DUF2884 domain-containing protein;protein_id=WP_023262963.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 185243 186289 . + . ID=gene-CCO57_RS03750;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=CCO57_RS03750;old_locus_tag=CCO57_03750 NZ_NPMC01000002.1 Protein Homology CDS 185243 186289 . + 0 ID=cds-WP_000394189.1;Parent=gene-CCO57_RS03750;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=CCO57_RS03750;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 186422 187429 . + . ID=gene-CCO57_RS03755;Name=CCO57_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03755;old_locus_tag=CCO57_03755 NZ_NPMC01000002.1 Protein Homology CDS 186422 187429 . + 0 ID=cds-WP_000252200.1;Parent=gene-CCO57_RS03755;Dbxref=GenBank:WP_000252200.1;Name=WP_000252200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=CCO57_RS03755;product=DUF1202 domain-containing protein;protein_id=WP_000252200.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 187520 188656 . - . ID=gene-CCO57_RS03760;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CCO57_RS03760;old_locus_tag=CCO57_03760 NZ_NPMC01000002.1 Protein Homology CDS 187520 188656 . - 0 ID=cds-WP_001096515.1;Parent=gene-CCO57_RS03760;Dbxref=GenBank:WP_001096515.1;Name=WP_001096515.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=CCO57_RS03760;product=radical SAM family heme chaperone HemW;protein_id=WP_001096515.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 188649 189242 . - . ID=gene-CCO57_RS03765;Name=CCO57_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03765;old_locus_tag=CCO57_03765 NZ_NPMC01000002.1 Protein Homology CDS 188649 189242 . - 0 ID=cds-WP_001174769.1;Parent=gene-CCO57_RS03765;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=CCO57_RS03765;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 189250 189540 . - . ID=gene-CCO57_RS03770;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=CCO57_RS03770;old_locus_tag=CCO57_03770 NZ_NPMC01000002.1 Protein Homology CDS 189250 189540 . - 0 ID=cds-WP_001277203.1;Parent=gene-CCO57_RS03770;Dbxref=GenBank:WP_001277203.1;Name=WP_001277203.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=CCO57_RS03770;product=DUF167 family protein YggU;protein_id=WP_001277203.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 189537 190103 . - . ID=gene-CCO57_RS03775;Name=CCO57_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03775;old_locus_tag=CCO57_03775 NZ_NPMC01000002.1 Protein Homology CDS 189537 190103 . - 0 ID=cds-WP_001094848.1;Parent=gene-CCO57_RS03775;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=CCO57_RS03775;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 190122 190826 . - . ID=gene-CCO57_RS03780;Name=CCO57_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03780;old_locus_tag=CCO57_03780 NZ_NPMC01000002.1 Protein Homology CDS 190122 190826 . - 0 ID=cds-WP_000997812.1;Parent=gene-CCO57_RS03780;Dbxref=GenBank:WP_000997812.1;Name=WP_000997812.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=CCO57_RS03780;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997812.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 190844 191824 . + . ID=gene-CCO57_RS03785;Name=CCO57_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03785;old_locus_tag=CCO57_03785 NZ_NPMC01000002.1 Protein Homology CDS 190844 191824 . + 0 ID=cds-WP_094914822.1;Parent=gene-CCO57_RS03785;Dbxref=GenBank:WP_094914822.1;Name=WP_094914822.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=CCO57_RS03785;product=type IV pilus twitching motility protein PilT;protein_id=WP_094914822.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 191956 192642 . + . ID=gene-CCO57_RS03790;Name=CCO57_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03790;old_locus_tag=CCO57_03790 NZ_NPMC01000002.1 Protein Homology CDS 191956 192642 . + 0 ID=cds-WP_052944283.1;Parent=gene-CCO57_RS03790;Dbxref=GenBank:WP_052944283.1;Name=WP_052944283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=CCO57_RS03790;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_052944283.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 192689 193105 . - . ID=gene-CCO57_RS03795;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CCO57_RS03795;old_locus_tag=CCO57_03795 NZ_NPMC01000002.1 Protein Homology CDS 192689 193105 . - 0 ID=cds-WP_079981321.1;Parent=gene-CCO57_RS03795;Dbxref=GenBank:WP_079981321.1;Name=WP_079981321.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=CCO57_RS03795;product=Holliday junction resolvase RuvX;protein_id=WP_079981321.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 193105 193668 . - . ID=gene-CCO57_RS03800;Name=CCO57_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03800;old_locus_tag=CCO57_03800 NZ_NPMC01000002.1 Protein Homology CDS 193105 193668 . - 0 ID=cds-WP_001053171.1;Parent=gene-CCO57_RS03800;Dbxref=GenBank:WP_001053171.1;Name=WP_001053171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=CCO57_RS03800;product=YqgE/AlgH family protein;protein_id=WP_001053171.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 193884 194831 . - . ID=gene-CCO57_RS03805;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=CCO57_RS03805;old_locus_tag=CCO57_03805 NZ_NPMC01000002.1 Protein Homology CDS 193884 194831 . - 0 ID=cds-WP_000593251.1;Parent=gene-CCO57_RS03805;Dbxref=GenBank:WP_000593251.1;Name=WP_000593251.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=CCO57_RS03805;product=glutathione synthase;protein_id=WP_000593251.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 194851 195582 . - . ID=gene-CCO57_RS03810;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=CCO57_RS03810;old_locus_tag=CCO57_03810 NZ_NPMC01000002.1 Protein Homology CDS 194851 195582 . - 0 ID=cds-WP_001222488.1;Parent=gene-CCO57_RS03810;Dbxref=GenBank:WP_001222488.1;Name=WP_001222488.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=CCO57_RS03810;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222488.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 195668 196366 . - . ID=gene-CCO57_RS03815;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=CCO57_RS03815;old_locus_tag=CCO57_03815 NZ_NPMC01000002.1 Protein Homology CDS 195668 196366 . - 0 ID=cds-WP_094914823.1;Parent=gene-CCO57_RS03815;Dbxref=GenBank:WP_094914823.1;Name=WP_094914823.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=CCO57_RS03815;product=deoxyribonuclease I;protein_id=WP_094914823.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 196462 196959 . - . ID=gene-CCO57_RS03820;Name=CCO57_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03820;old_locus_tag=CCO57_03820 NZ_NPMC01000002.1 Protein Homology CDS 196462 196959 . - 0 ID=cds-WP_001528097.1;Parent=gene-CCO57_RS03820;Dbxref=GenBank:WP_001528097.1;Name=WP_001528097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=CCO57_RS03820;product=SprT family zinc-dependent metalloprotease;protein_id=WP_001528097.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 197038 198432 . - . ID=gene-CCO57_RS03825;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=CCO57_RS03825;old_locus_tag=CCO57_03825 NZ_NPMC01000002.1 Protein Homology CDS 197038 198432 . - 0 ID=cds-WP_001113171.1;Parent=gene-CCO57_RS03825;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=CCO57_RS03825;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 198925 200079 . - . ID=gene-CCO57_RS03830;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CCO57_RS03830;old_locus_tag=CCO57_03830 NZ_NPMC01000002.1 Protein Homology CDS 198925 200079 . - 0 ID=cds-WP_001062140.1;Parent=gene-CCO57_RS03830;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=CCO57_RS03830;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 200135 200434 . + . ID=gene-CCO57_RS03835;Name=CCO57_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03835;old_locus_tag=CCO57_03835 NZ_NPMC01000002.1 GeneMarkS-2+ CDS 200135 200434 . + 0 ID=cds-WP_001540882.1;Parent=gene-CCO57_RS03835;Dbxref=GenBank:WP_001540882.1;Name=WP_001540882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS03835;product=hypothetical protein;protein_id=WP_001540882.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 200494 200643 . + . ID=gene-CCO57_RS24790;Name=CCO57_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24790 NZ_NPMC01000002.1 Protein Homology CDS 200494 200643 . + 0 ID=cds-WP_001751809.1;Parent=gene-CCO57_RS24790;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=CCO57_RS24790;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 200729 200860 . + . ID=gene-CCO57_RS03845;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=CCO57_RS03845;old_locus_tag=CCO57_03845 NZ_NPMC01000002.1 Protein Homology CDS 200729 200860 . + 0 ID=cds-WP_079949960.1;Parent=gene-CCO57_RS03845;Dbxref=GenBank:WP_079949960.1;Name=WP_079949960.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=CCO57_RS03845;product=acid stress response protein YqgB;protein_id=WP_079949960.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 200869 202845 . + . ID=gene-CCO57_RS03850;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=CCO57_RS03850;old_locus_tag=CCO57_03850 NZ_NPMC01000002.1 Protein Homology CDS 200869 202845 . + 0 ID=cds-WP_001278580.1;Parent=gene-CCO57_RS03850;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=CCO57_RS03850;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 203074 203994 . + . ID=gene-CCO57_RS03855;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=CCO57_RS03855;old_locus_tag=CCO57_03855 NZ_NPMC01000002.1 Protein Homology CDS 203074 203994 . + 0 ID=cds-WP_000105550.1;Parent=gene-CCO57_RS03855;Dbxref=GenBank:WP_000105550.1;Name=WP_000105550.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=CCO57_RS03855;product=agmatinase;protein_id=WP_000105550.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 204095 204853 . - . ID=gene-CCO57_RS03860;Name=CCO57_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03860;old_locus_tag=CCO57_03860 NZ_NPMC01000002.1 Protein Homology CDS 204095 204853 . - 0 ID=cds-WP_058214666.1;Parent=gene-CCO57_RS03860;Dbxref=GenBank:WP_058214666.1;Name=WP_058214666.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=CCO57_RS03860;product=M48 family metallopeptidase;protein_id=WP_058214666.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 205129 207120 . + . ID=gene-CCO57_RS03865;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO57_RS03865;old_locus_tag=CCO57_03865 NZ_NPMC01000002.1 Protein Homology CDS 205129 207120 . + 0 ID=cds-WP_094914824.1;Parent=gene-CCO57_RS03865;Dbxref=GenBank:WP_094914824.1;Name=WP_094914824.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=CCO57_RS03865;product=transketolase;protein_id=WP_094914824.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 207432 207875 . + . ID=gene-CCO57_RS03870;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=CCO57_RS03870;old_locus_tag=CCO57_03870 NZ_NPMC01000002.1 Protein Homology CDS 207432 207875 . + 0 ID=cds-WP_094914825.1;Parent=gene-CCO57_RS03870;Dbxref=GenBank:WP_094914825.1;Name=WP_094914825.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518319.1;locus_tag=CCO57_RS03870;product=PTS mannitol transporter subunit IIA;protein_id=WP_094914825.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 207903 209282 . + . ID=gene-CCO57_RS03875;Name=CCO57_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03875;old_locus_tag=CCO57_03875 NZ_NPMC01000002.1 Protein Homology CDS 207903 209282 . + 0 ID=cds-WP_000400411.1;Parent=gene-CCO57_RS03875;Dbxref=GenBank:WP_000400411.1;Name=WP_000400411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400412.1;locus_tag=CCO57_RS03875;product=PTS mannitol transporter subunit IICB;protein_id=WP_000400411.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 209306 210580 . + . ID=gene-CCO57_RS03880;Name=CCO57_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03880;old_locus_tag=CCO57_03880 NZ_NPMC01000002.1 Protein Homology CDS 209306 210580 . + 0 ID=cds-WP_000853171.1;Parent=gene-CCO57_RS03880;Dbxref=GenBank:WP_000853171.1;Name=WP_000853171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000853171.1;locus_tag=CCO57_RS03880;product=zinc-binding dehydrogenase;protein_id=WP_000853171.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 210577 211548 . + . ID=gene-CCO57_RS03885;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO57_RS03885;old_locus_tag=CCO57_03885 NZ_NPMC01000002.1 Protein Homology CDS 210577 211548 . + 0 ID=cds-WP_001519647.1;Parent=gene-CCO57_RS03885;Dbxref=GenBank:WP_001519647.1;Name=WP_001519647.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154382.1;locus_tag=CCO57_RS03885;product=class II fructose-bisphosphatase;protein_id=WP_001519647.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 211762 212271 . + . ID=gene-CCO57_RS03890;Name=CCO57_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03890;old_locus_tag=CCO57_03890 NZ_NPMC01000002.1 Protein Homology CDS 211762 212271 . + 0 ID=cds-WP_000209974.1;Parent=gene-CCO57_RS03890;Dbxref=GenBank:WP_000209974.1;Name=WP_000209974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708693.1;locus_tag=CCO57_RS03890;product=MltR family transcriptional regulator;protein_id=WP_000209974.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 212268 212984 . + . ID=gene-CCO57_RS03895;Name=CCO57_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03895;old_locus_tag=CCO57_03895 NZ_NPMC01000002.1 Protein Homology CDS 212268 212984 . + 0 ID=cds-WP_000684837.1;Parent=gene-CCO57_RS03895;Dbxref=GenBank:WP_000684837.1;Name=WP_000684837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406292.1;locus_tag=CCO57_RS03895;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000684837.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 212953 213642 . - . ID=gene-CCO57_RS03900;Name=CCO57_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03900;old_locus_tag=CCO57_03900 NZ_NPMC01000002.1 Protein Homology CDS 212953 213642 . - 0 ID=cds-WP_023136678.1;Parent=gene-CCO57_RS03900;Dbxref=GenBank:WP_023136678.1;Name=WP_023136678.1;Ontology_term=GO:0055085,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956937.1;locus_tag=CCO57_RS03900;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_023136678.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 213636 214313 . - . ID=gene-CCO57_RS03905;Name=CCO57_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03905;old_locus_tag=CCO57_03905 NZ_NPMC01000002.1 Protein Homology CDS 213636 214313 . - 0 ID=cds-WP_001517914.1;Parent=gene-CCO57_RS03905;Dbxref=GenBank:WP_001517914.1;Name=WP_001517914.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=CCO57_RS03905;product=ABC transporter ATP-binding protein;protein_id=WP_001517914.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 214301 215008 . - . ID=gene-CCO57_RS03910;Name=CCO57_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03910;old_locus_tag=CCO57_03910 NZ_NPMC01000002.1 Protein Homology CDS 214301 215008 . - 0 ID=cds-WP_000553256.1;Parent=gene-CCO57_RS03910;Dbxref=GenBank:WP_000553256.1;Name=WP_000553256.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=CCO57_RS03910;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553256.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 215009 215587 . - . ID=gene-CCO57_RS03915;Name=CCO57_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03915;old_locus_tag=CCO57_03915 NZ_NPMC01000002.1 Protein Homology CDS 215009 215587 . - 0 ID=cds-WP_000124001.1;Parent=gene-CCO57_RS03915;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=CCO57_RS03915;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 215613 216038 . - . ID=gene-CCO57_RS03920;Name=CCO57_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03920;old_locus_tag=CCO57_03920 NZ_NPMC01000002.1 Protein Homology CDS 215613 216038 . - 0 ID=cds-WP_000218563.1;Parent=gene-CCO57_RS03920;Dbxref=GenBank:WP_000218563.1;Name=WP_000218563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=CCO57_RS03920;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218563.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 216412 217458 . + . ID=gene-CCO57_RS03930;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=CCO57_RS03930;old_locus_tag=CCO57_03930 NZ_NPMC01000002.1 Protein Homology CDS 216412 217458 . + 0 ID=cds-WP_023241571.1;Parent=gene-CCO57_RS03930;Dbxref=GenBank:WP_023241571.1;Name=WP_023241571.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=CCO57_RS03930;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_023241571.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 217480 218643 . + . ID=gene-CCO57_RS03935;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CCO57_RS03935;old_locus_tag=CCO57_03935 NZ_NPMC01000002.1 Protein Homology CDS 217480 218643 . + 0 ID=cds-WP_000111274.1;Parent=gene-CCO57_RS03935;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=CCO57_RS03935;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 218745 219824 . + . ID=gene-CCO57_RS03940;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=CCO57_RS03940;old_locus_tag=CCO57_03940 NZ_NPMC01000002.1 Protein Homology CDS 218745 219824 . + 0 ID=cds-WP_000034386.1;Parent=gene-CCO57_RS03940;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=CCO57_RS03940;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 220047 220907 . + . ID=gene-CCO57_RS03945;Name=CCO57_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03945;old_locus_tag=CCO57_03945 NZ_NPMC01000002.1 Protein Homology CDS 220047 220907 . + 0 ID=cds-WP_000389833.1;Parent=gene-CCO57_RS03945;Dbxref=GenBank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=CCO57_RS03945;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 221108 221743 . + . ID=gene-CCO57_RS03950;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=CCO57_RS03950;old_locus_tag=CCO57_03950 NZ_NPMC01000002.1 Protein Homology CDS 221108 221743 . + 0 ID=cds-WP_000626863.1;Parent=gene-CCO57_RS03950;Dbxref=GenBank:WP_000626863.1;Name=WP_000626863.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=CCO57_RS03950;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 221837 222583 . + . ID=gene-CCO57_RS03955;Name=CCO57_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03955;old_locus_tag=CCO57_03955 NZ_NPMC01000002.1 Protein Homology CDS 221837 222583 . + 0 ID=cds-WP_000669854.1;Parent=gene-CCO57_RS03955;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=CCO57_RS03955;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 222751 223644 . - . ID=gene-CCO57_RS03960;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=CCO57_RS03960;old_locus_tag=CCO57_03960 NZ_NPMC01000002.1 Protein Homology CDS 222751 223644 . - 0 ID=cds-WP_000828345.1;Parent=gene-CCO57_RS03960;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=CCO57_RS03960;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 223798 224457 . + . ID=gene-CCO57_RS03965;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CCO57_RS03965;old_locus_tag=CCO57_03965 NZ_NPMC01000002.1 Protein Homology CDS 223798 224457 . + 0 ID=cds-WP_000189741.1;Parent=gene-CCO57_RS03965;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=CCO57_RS03965;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 224724 225956 . + . ID=gene-CCO57_RS03970;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CCO57_RS03970;old_locus_tag=CCO57_03970 NZ_NPMC01000002.1 Protein Homology CDS 224724 225956 . + 0 ID=cds-WP_001151627.1;Parent=gene-CCO57_RS03970;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=CCO57_RS03970;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 226337 226933 . - . ID=gene-CCO57_RS03975;Name=CCO57_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03975;old_locus_tag=CCO57_03975 NZ_NPMC01000002.1 Protein Homology CDS 226337 226933 . - 0 ID=cds-WP_031607403.1;Parent=gene-CCO57_RS03975;Dbxref=GenBank:WP_031607403.1;Name=WP_031607403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=CCO57_RS03975;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_031607403.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 226954 227137 . - . ID=gene-CCO57_RS03980;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CCO57_RS03980;old_locus_tag=CCO57_03980 NZ_NPMC01000002.1 cmsearch ncRNA 226954 227137 . - . ID=rna-CCO57_RS03980;Parent=gene-CCO57_RS03980;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS03980;product=6S RNA NZ_NPMC01000002.1 cmsearch exon 226954 227137 . - . ID=exon-CCO57_RS03980-1;Parent=rna-CCO57_RS03980;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS03980;product=6S RNA NZ_NPMC01000002.1 RefSeq gene 227179 227508 . - . ID=gene-CCO57_RS03985;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CCO57_RS03985;old_locus_tag=CCO57_03985 NZ_NPMC01000002.1 Protein Homology CDS 227179 227508 . - 0 ID=cds-WP_001276011.1;Parent=gene-CCO57_RS03985;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=CCO57_RS03985;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 227675 228253 . + . ID=gene-CCO57_RS03995;Name=CCO57_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS03995;old_locus_tag=CCO57_03995 NZ_NPMC01000002.1 Protein Homology CDS 227675 228253 . + 0 ID=cds-WP_000027236.1;Parent=gene-CCO57_RS03995;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=CCO57_RS03995;product=YecA family protein;protein_id=WP_000027236.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 228279 229595 . + . ID=gene-CCO57_RS04000;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=CCO57_RS04000;old_locus_tag=CCO57_04000 NZ_NPMC01000002.1 Protein Homology CDS 228279 229595 . + 0 ID=cds-WP_023220833.1;Parent=gene-CCO57_RS04000;Dbxref=GenBank:WP_023220833.1;Name=WP_023220833.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=CCO57_RS04000;product=Xaa-Pro aminopeptidase;protein_id=WP_023220833.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 229592 230770 . + . ID=gene-CCO57_RS04005;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=CCO57_RS04005;old_locus_tag=CCO57_04005 NZ_NPMC01000002.1 Protein Homology CDS 229592 230770 . + 0 ID=cds-WP_000111142.1;Parent=gene-CCO57_RS04005;Dbxref=GenBank:WP_000111142.1;Name=WP_000111142.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=CCO57_RS04005;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111142.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 230896 232098 . + . ID=gene-CCO57_RS04010;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=CCO57_RS04010;old_locus_tag=CCO57_04010 NZ_NPMC01000002.1 Protein Homology CDS 230896 232098 . + 0 ID=cds-WP_001192136.1;Parent=gene-CCO57_RS04010;Dbxref=GenBank:WP_001192136.1;Name=WP_001192136.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=CCO57_RS04010;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192136.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 232553 233647 . + . ID=gene-CCO57_RS04015;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CCO57_RS04015;old_locus_tag=CCO57_04015 NZ_NPMC01000002.1 Protein Homology CDS 232553 233647 . + 0 ID=cds-WP_094914826.1;Parent=gene-CCO57_RS04015;Dbxref=GenBank:WP_094914826.1;Name=WP_094914826.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=CCO57_RS04015;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_094914826.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 233673 234062 . + . ID=gene-CCO57_RS04020;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CCO57_RS04020;old_locus_tag=CCO57_04020 NZ_NPMC01000002.1 Protein Homology CDS 233673 234062 . + 0 ID=cds-WP_001295377.1;Parent=gene-CCO57_RS04020;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=CCO57_RS04020;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 234225 237098 . + . ID=gene-CCO57_RS04025;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CCO57_RS04025;old_locus_tag=CCO57_04025 NZ_NPMC01000002.1 Protein Homology CDS 234225 237098 . + 0 ID=cds-WP_031566498.1;Parent=gene-CCO57_RS04025;Dbxref=GenBank:WP_031566498.1;Name=WP_031566498.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=CCO57_RS04025;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_031566498.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 237554 238447 . + . ID=gene-CCO57_RS04035;Name=CCO57_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04035;old_locus_tag=CCO57_04035 NZ_NPMC01000002.1 Protein Homology CDS 237554 238447 . + 0 ID=cds-WP_000819367.1;Parent=gene-CCO57_RS04035;Dbxref=GenBank:WP_000819367.1;Name=WP_000819367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=CCO57_RS04035;product=transporter;protein_id=WP_000819367.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 238495 239928 . - . ID=gene-CCO57_RS04040;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=CCO57_RS04040;old_locus_tag=CCO57_04040 NZ_NPMC01000002.1 Protein Homology CDS 238495 239928 . - 0 ID=cds-WP_001230152.1;Parent=gene-CCO57_RS04040;Dbxref=GenBank:WP_001230152.1;Name=WP_001230152.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=CCO57_RS04040;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001230152.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 240087 240398 . + . ID=gene-CCO57_RS04045;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=CCO57_RS04045;old_locus_tag=CCO57_04045 NZ_NPMC01000002.1 Protein Homology CDS 240087 240398 . + 0 ID=cds-WP_001182976.1;Parent=gene-CCO57_RS04045;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=CCO57_RS04045;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 240562 241221 . + . ID=gene-CCO57_RS04050;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CCO57_RS04050;old_locus_tag=CCO57_04050 NZ_NPMC01000002.1 Protein Homology CDS 240562 241221 . + 0 ID=cds-WP_000250289.1;Parent=gene-CCO57_RS04050;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=CCO57_RS04050;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 241337 242317 . - . ID=gene-CCO57_RS04060;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=CCO57_RS04060;old_locus_tag=CCO57_04060 NZ_NPMC01000002.1 Protein Homology CDS 241337 242317 . - 0 ID=cds-WP_000874170.1;Parent=gene-CCO57_RS04060;Dbxref=GenBank:WP_000874170.1;Name=WP_000874170.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=CCO57_RS04060;product=tRNA-modifying protein YgfZ;protein_id=WP_000874170.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 242567 242833 . + . ID=gene-CCO57_RS04070;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=CCO57_RS04070;old_locus_tag=CCO57_04070 NZ_NPMC01000002.1 Protein Homology CDS 242567 242833 . + 0 ID=cds-WP_000351186.1;Parent=gene-CCO57_RS04070;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=CCO57_RS04070;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 242814 243227 . + . ID=gene-CCO57_RS04075;Name=CCO57_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04075;old_locus_tag=CCO57_04075 NZ_NPMC01000002.1 Protein Homology CDS 242814 243227 . + 0 ID=cds-WP_000244757.1;Parent=gene-CCO57_RS04075;Dbxref=GenBank:WP_000244757.1;Name=WP_000244757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=CCO57_RS04075;product=protein YgfX;protein_id=WP_000244757.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 243280 243801 . - . ID=gene-CCO57_RS04080;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=CCO57_RS04080;old_locus_tag=CCO57_04080 NZ_NPMC01000002.1 Protein Homology CDS 243280 243801 . - 0 ID=cds-WP_001055885.1;Parent=gene-CCO57_RS04080;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=CCO57_RS04080;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 243914 244810 . + . ID=gene-CCO57_RS04085;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CCO57_RS04085;old_locus_tag=CCO57_04085 NZ_NPMC01000002.1 Protein Homology CDS 243914 244810 . + 0 ID=cds-WP_000434302.1;Parent=gene-CCO57_RS04085;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=CCO57_RS04085;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 244834 245547 . + . ID=gene-CCO57_RS04090;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=CCO57_RS04090;old_locus_tag=CCO57_04090 NZ_NPMC01000002.1 Protein Homology CDS 244834 245547 . + 0 ID=cds-WP_000745614.1;Parent=gene-CCO57_RS04090;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=CCO57_RS04090;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 245553 247286 . + . ID=gene-CCO57_RS04095;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CCO57_RS04095;old_locus_tag=CCO57_04095 NZ_NPMC01000002.1 Protein Homology CDS 245553 247286 . + 0 ID=cds-WP_000813394.1;Parent=gene-CCO57_RS04095;Dbxref=GenBank:WP_000813394.1;Name=WP_000813394.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=CCO57_RS04095;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813394.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 247391 248489 . + . ID=gene-CCO57_RS04100;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CCO57_RS04100;old_locus_tag=CCO57_04100 NZ_NPMC01000002.1 Protein Homology CDS 247391 247465 . + 0 ID=cds-WP_010989230.1;Parent=gene-CCO57_RS04100;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO57_RS04100;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPMC01000002.1 Protein Homology CDS 247467 248489 . + 0 ID=cds-WP_010989230.1;Parent=gene-CCO57_RS04100;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO57_RS04100;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 248499 250016 . + . ID=gene-CCO57_RS04105;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CCO57_RS04105;old_locus_tag=CCO57_04105 NZ_NPMC01000002.1 Protein Homology CDS 248499 250016 . + 0 ID=cds-WP_000003339.1;Parent=gene-CCO57_RS04105;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=CCO57_RS04105;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 250092 250637 . - . ID=gene-CCO57_RS04110;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=CCO57_RS04110;old_locus_tag=CCO57_04110 NZ_NPMC01000002.1 Protein Homology CDS 250092 250637 . - 0 ID=cds-WP_079821880.1;Parent=gene-CCO57_RS04110;Dbxref=GenBank:WP_079821880.1;Name=WP_079821880.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=CCO57_RS04110;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_079821880.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 250902 251660 . + . ID=gene-CCO57_RS04120;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=CCO57_RS04120;old_locus_tag=CCO57_04120 NZ_NPMC01000002.1 Protein Homology CDS 250902 251660 . + 0 ID=cds-WP_000244328.1;Parent=gene-CCO57_RS04120;Dbxref=GenBank:WP_000244328.1;Name=WP_000244328.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=CCO57_RS04120;product=amidase activator ActS;protein_id=WP_000244328.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 251740 251813 . + . ID=gene-CCO57_RS04125;Name=CCO57_RS04125;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS04125;old_locus_tag=CCO57_04125 NZ_NPMC01000002.1 tRNAscan-SE tRNA 251740 251813 . + . ID=rna-CCO57_RS04125;Parent=gene-CCO57_RS04125;anticodon=(pos:251772..251774);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS04125;product=tRNA-Gly NZ_NPMC01000002.1 tRNAscan-SE exon 251740 251813 . + . ID=exon-CCO57_RS04125-1;Parent=rna-CCO57_RS04125;anticodon=(pos:251772..251774);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS04125;product=tRNA-Gly NZ_NPMC01000002.1 RefSeq gene 251937 252743 . - . ID=gene-CCO57_RS04130;Name=CCO57_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04130;old_locus_tag=CCO57_04130 NZ_NPMC01000002.1 Protein Homology CDS 251937 252743 . - 0 ID=cds-WP_079821879.1;Parent=gene-CCO57_RS04130;Dbxref=GenBank:WP_079821879.1;Name=WP_079821879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=CCO57_RS04130;product=DUF1460 domain-containing protein;protein_id=WP_079821879.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 252934 253104 . + . ID=gene-CCO57_RS24055;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=pseudogene;locus_tag=CCO57_RS24055;partial=true;pseudo=true;start_range=.,252934 NZ_NPMC01000002.1 Protein Homology CDS 252934 253104 . + 0 ID=cds-CCO57_RS24055;Parent=gene-CCO57_RS24055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=CCO57_RS24055;partial=true;product=tRNA(fMet)-specific endonuclease VapC;pseudo=true;start_range=.,252934;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 253908 254444 . + . ID=gene-CCO57_RS04150;Name=CCO57_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04150;old_locus_tag=CCO57_04150 NZ_NPMC01000002.1 Protein Homology CDS 253908 254444 . + 0 ID=cds-WP_001038499.1;Parent=gene-CCO57_RS04150;Dbxref=GenBank:WP_001038499.1;Name=WP_001038499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=CCO57_RS04150;product=STM3031 family outer membrane protein;protein_id=WP_001038499.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 254491 255123 . + . ID=gene-CCO57_RS04155;Name=CCO57_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04155;old_locus_tag=CCO57_04155 NZ_NPMC01000002.1 Protein Homology CDS 254491 255123 . + 0 ID=cds-WP_000835269.1;Parent=gene-CCO57_RS04155;Dbxref=GenBank:WP_000835269.1;Name=WP_000835269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=CCO57_RS04155;product=YfdX family protein;protein_id=WP_000835269.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 255842 256426 . + . ID=gene-CCO57_RS04160;Name=CCO57_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04160;old_locus_tag=CCO57_04160 NZ_NPMC01000002.1 Protein Homology CDS 255842 256426 . + 0 ID=cds-WP_094914827.1;Parent=gene-CCO57_RS04160;Dbxref=GenBank:WP_094914827.1;Name=WP_094914827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244636.1;locus_tag=CCO57_RS04160;product=fimbrial protein;protein_id=WP_094914827.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 256546 259035 . + . ID=gene-CCO57_RS04165;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=CCO57_RS04165;old_locus_tag=CCO57_04165 NZ_NPMC01000002.1 Protein Homology CDS 256546 259035 . + 0 ID=cds-WP_024154919.1;Parent=gene-CCO57_RS04165;Dbxref=GenBank:WP_024154919.1;Name=WP_024154919.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=CCO57_RS04165;product=fimbrial outer membrane usher protein StdB;protein_id=WP_024154919.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 259076 259819 . + . ID=gene-CCO57_RS04170;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=CCO57_RS04170;old_locus_tag=CCO57_04170 NZ_NPMC01000002.1 Protein Homology CDS 259076 259819 . + 0 ID=cds-WP_000798494.1;Parent=gene-CCO57_RS04170;Dbxref=GenBank:WP_000798494.1;Name=WP_000798494.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=CCO57_RS04170;product=fimbrial biogenesis chaperone StdC;protein_id=WP_000798494.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 259816 260898 . + . ID=gene-CCO57_RS04175;Name=CCO57_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04175;old_locus_tag=CCO57_04175 NZ_NPMC01000002.1 Protein Homology CDS 259816 260898 . + 0 ID=cds-WP_000147767.1;Parent=gene-CCO57_RS04175;Dbxref=GenBank:WP_000147767.1;Name=WP_000147767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=CCO57_RS04175;product=fimbrial protein;protein_id=WP_000147767.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 261007 261513 . + . ID=gene-CCO57_RS04180;Name=CCO57_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04180;old_locus_tag=CCO57_04180 NZ_NPMC01000002.1 Protein Homology CDS 261007 261513 . + 0 ID=cds-WP_000093333.1;Parent=gene-CCO57_RS04180;Dbxref=GenBank:WP_000093333.1;Name=WP_000093333.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=CCO57_RS04180;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000093333.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 261500 262258 . + . ID=gene-CCO57_RS04185;Name=CCO57_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04185;old_locus_tag=CCO57_04185 NZ_NPMC01000002.1 Protein Homology CDS 261500 262258 . + 0 ID=cds-WP_000134782.1;Parent=gene-CCO57_RS04185;Dbxref=GenBank:WP_000134782.1;Name=WP_000134782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=CCO57_RS04185;product=transcriptional regulator;protein_id=WP_000134782.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 262468 263268 . - . ID=gene-CCO57_RS04190;Name=CCO57_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04190;old_locus_tag=CCO57_04190 NZ_NPMC01000002.1 Protein Homology CDS 262468 263268 . - 0 ID=cds-WP_061673587.1;Parent=gene-CCO57_RS04190;Dbxref=GenBank:WP_061673587.1;Name=WP_061673587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=CCO57_RS04190;product=nickel/cobalt efflux protein RcnA;protein_id=WP_061673587.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 263390 263662 . + . ID=gene-CCO57_RS04195;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=CCO57_RS04195;old_locus_tag=CCO57_04195 NZ_NPMC01000002.1 Protein Homology CDS 263390 263662 . + 0 ID=cds-WP_000019953.1;Parent=gene-CCO57_RS04195;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=CCO57_RS04195;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 263693 264922 . - . ID=gene-CCO57_RS04200;Name=CCO57_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04200;old_locus_tag=CCO57_04200 NZ_NPMC01000002.1 Protein Homology CDS 263693 264922 . - 0 ID=cds-WP_000036842.1;Parent=gene-CCO57_RS04200;Dbxref=GenBank:WP_000036842.1;Name=WP_000036842.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=CCO57_RS04200;product=amino acid permease;protein_id=WP_000036842.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 265064 265519 . - . ID=gene-CCO57_RS04205;Name=CCO57_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04205;old_locus_tag=CCO57_04205 NZ_NPMC01000002.1 Protein Homology CDS 265064 265519 . - 0 ID=cds-WP_001519547.1;Parent=gene-CCO57_RS04205;Dbxref=GenBank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=CCO57_RS04205;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 265623 266486 . + . ID=gene-CCO57_RS04210;Name=CCO57_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04210;old_locus_tag=CCO57_04210 NZ_NPMC01000002.1 Protein Homology CDS 265623 266486 . + 0 ID=cds-WP_001270769.1;Parent=gene-CCO57_RS04210;Dbxref=GenBank:WP_001270769.1;Name=WP_001270769.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=CCO57_RS04210;product=LysR family transcriptional regulator;protein_id=WP_001270769.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 266609 267787 . + . ID=gene-CCO57_RS04215;Name=CCO57_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04215;old_locus_tag=CCO57_04215 NZ_NPMC01000002.1 Protein Homology CDS 266609 267787 . + 0 ID=cds-WP_094914828.1;Parent=gene-CCO57_RS04215;Dbxref=GenBank:WP_094914828.1;Name=WP_094914828.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=CCO57_RS04215;product=acetyl-CoA C-acetyltransferase;protein_id=WP_094914828.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 268217 269053 . + . ID=gene-CCO57_RS04225;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=CCO57_RS04225;old_locus_tag=CCO57_04225 NZ_NPMC01000002.1 Protein Homology CDS 268217 269053 . + 0 ID=cds-WP_000383273.1;Parent=gene-CCO57_RS04225;Dbxref=GenBank:WP_000383273.1;Name=WP_000383273.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=CCO57_RS04225;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383273.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 269110 269871 . + . ID=gene-CCO57_RS04230;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=CCO57_RS04230;old_locus_tag=CCO57_04230 NZ_NPMC01000002.1 Protein Homology CDS 269110 269871 . + 0 ID=cds-WP_000602495.1;Parent=gene-CCO57_RS04230;Dbxref=GenBank:WP_000602495.1;Name=WP_000602495.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=CCO57_RS04230;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602495.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 270223 271638 . + . ID=gene-CCO57_RS04240;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=CCO57_RS04240;old_locus_tag=CCO57_04240 NZ_NPMC01000002.1 Protein Homology CDS 270223 271638 . + 0 ID=cds-WP_000253635.1;Parent=gene-CCO57_RS04240;Dbxref=GenBank:WP_000253635.1;Name=WP_000253635.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=CCO57_RS04240;product=arabinose-proton symporter AraE;protein_id=WP_000253635.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 271751 272458 . + . ID=gene-CCO57_RS04245;Name=CCO57_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04245;old_locus_tag=CCO57_04245 NZ_NPMC01000002.1 Protein Homology CDS 271751 272458 . + 0 ID=cds-WP_000848629.1;Parent=gene-CCO57_RS04245;Dbxref=GenBank:WP_000848629.1;Name=WP_000848629.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=CCO57_RS04245;product=aspartate/glutamate racemase;protein_id=WP_000848629.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 272430 273365 . - . ID=gene-CCO57_RS04250;Name=CCO57_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04250;old_locus_tag=CCO57_04250 NZ_NPMC01000002.1 Protein Homology CDS 272430 273365 . - 0 ID=cds-WP_000741798.1;Parent=gene-CCO57_RS04250;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=CCO57_RS04250;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 273483 274745 . + . ID=gene-CCO57_RS04255;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CCO57_RS04255;old_locus_tag=CCO57_04255 NZ_NPMC01000002.1 Protein Homology CDS 273483 274745 . + 0 ID=cds-WP_000058915.1;Parent=gene-CCO57_RS04255;Dbxref=GenBank:WP_000058915.1;Name=WP_000058915.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406298.1;locus_tag=CCO57_RS04255;product=diaminopimelate decarboxylase;protein_id=WP_000058915.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 274755 275777 . - . ID=gene-CCO57_RS04260;Name=CCO57_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04260;old_locus_tag=CCO57_04260 NZ_NPMC01000002.1 Protein Homology CDS 274755 275777 . - 0 ID=cds-WP_000968338.1;Parent=gene-CCO57_RS04260;Dbxref=GenBank:WP_000968338.1;Name=WP_000968338.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=CCO57_RS04260;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968338.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 275788 276816 . - . ID=gene-CCO57_RS04265;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=CCO57_RS04265;old_locus_tag=CCO57_04265 NZ_NPMC01000002.1 Protein Homology CDS 275788 276816 . - 0 ID=cds-WP_079821875.1;Parent=gene-CCO57_RS04265;Dbxref=GenBank:WP_079821875.1;Name=WP_079821875.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=CCO57_RS04265;product=HTH-type transcriptional regulator GalR;protein_id=WP_079821875.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 277409 279568 . + . ID=gene-CCO57_RS04270;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=CCO57_RS04270;old_locus_tag=CCO57_04270 NZ_NPMC01000002.1 Protein Homology CDS 277409 279568 . + 0 ID=cds-WP_079821874.1;Parent=gene-CCO57_RS04270;Dbxref=GenBank:WP_079821874.1;Name=WP_079821874.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=CCO57_RS04270;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_079821874.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 279561 280763 . + . ID=gene-CCO57_RS04275;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=CCO57_RS04275;old_locus_tag=CCO57_04275 NZ_NPMC01000002.1 Protein Homology CDS 279561 280763 . + 0 ID=cds-WP_000004690.1;Parent=gene-CCO57_RS04275;Dbxref=GenBank:WP_000004690.1;Name=WP_000004690.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=CCO57_RS04275;product=lysophospholipid transporter LplT;protein_id=WP_000004690.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 280850 281890 . - . ID=gene-CCO57_RS04280;Name=CCO57_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04280;old_locus_tag=CCO57_04280 NZ_NPMC01000002.1 Protein Homology CDS 280850 281890 . - 0 ID=cds-WP_000558960.1;Parent=gene-CCO57_RS04280;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=CCO57_RS04280;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 282081 282299 . - . ID=gene-CCO57_RS04285;Name=CCO57_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04285;old_locus_tag=CCO57_04285 NZ_NPMC01000002.1 Protein Homology CDS 282081 282299 . - 0 ID=cds-WP_000758662.1;Parent=gene-CCO57_RS04285;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=CCO57_RS04285;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 282469 283182 . - . ID=gene-CCO57_RS04290;Name=CCO57_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04290;old_locus_tag=CCO57_04290 NZ_NPMC01000002.1 Protein Homology CDS 282469 283182 . - 0 ID=cds-WP_000895632.1;Parent=gene-CCO57_RS04290;Dbxref=GenBank:WP_000895632.1;Name=WP_000895632.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=CCO57_RS04290;product=TerC family protein;protein_id=WP_000895632.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 283364 284059 . - . ID=gene-CCO57_RS04295;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=CCO57_RS04295;old_locus_tag=CCO57_04295 NZ_NPMC01000002.1 Protein Homology CDS 283364 284059 . - 0 ID=cds-WP_001274930.1;Parent=gene-CCO57_RS04295;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=CCO57_RS04295;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 284742 285272 . + . ID=gene-CCO57_RS04300;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=CCO57_RS04300;old_locus_tag=CCO57_04300 NZ_NPMC01000002.1 Protein Homology CDS 284742 285272 . + 0 ID=cds-WP_000564481.1;Parent=gene-CCO57_RS04300;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=CCO57_RS04300;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 285285 287531 . + . ID=gene-CCO57_RS04305;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO57_RS04305;old_locus_tag=CCO57_04305 NZ_NPMC01000002.1 Protein Homology CDS 285285 287531 . + 0 ID=cds-WP_000957887.1;Parent=gene-CCO57_RS04305;Dbxref=GenBank:WP_000957887.1;Name=WP_000957887.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=CCO57_RS04305;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957887.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 287747 288622 . + . ID=gene-CCO57_RS04310;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CCO57_RS04310;old_locus_tag=CCO57_04310 NZ_NPMC01000002.1 Protein Homology CDS 287747 288622 . + 0 ID=cds-WP_000204647.1;Parent=gene-CCO57_RS04310;Dbxref=GenBank:WP_000204647.1;Name=WP_000204647.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=CCO57_RS04310;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204647.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 288629 289423 . + . ID=gene-CCO57_RS04315;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=CCO57_RS04315;old_locus_tag=CCO57_04315 NZ_NPMC01000002.1 Protein Homology CDS 288629 289423 . + 0 ID=cds-WP_000816247.1;Parent=gene-CCO57_RS04315;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=CCO57_RS04315;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 289608 290078 . + . ID=gene-CCO57_RS04325;Name=CCO57_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04325;old_locus_tag=CCO57_04325 NZ_NPMC01000002.1 Protein Homology CDS 289608 290078 . + 0 ID=cds-WP_000744672.1;Parent=gene-CCO57_RS04325;Dbxref=GenBank:WP_000744672.1;Name=WP_000744672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=CCO57_RS04325;product=prepilin peptidase-dependent protein;protein_id=WP_000744672.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 290069 290632 . + . ID=gene-CCO57_RS04330;Name=CCO57_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04330;old_locus_tag=CCO57_04330 NZ_NPMC01000002.1 Protein Homology CDS 290069 290632 . + 0 ID=cds-WP_000029156.1;Parent=gene-CCO57_RS04330;Dbxref=GenBank:WP_000029156.1;Name=WP_000029156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=CCO57_RS04330;product=prepilin peptidase-dependent protein;protein_id=WP_000029156.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 290629 291036 . + . ID=gene-CCO57_RS04335;Name=CCO57_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04335;old_locus_tag=CCO57_04335 NZ_NPMC01000002.1 Protein Homology CDS 290629 291036 . + 0 ID=cds-WP_001078532.1;Parent=gene-CCO57_RS04335;Dbxref=GenBank:WP_001078532.1;Name=WP_001078532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=CCO57_RS04335;product=DUF2509 family protein;protein_id=WP_001078532.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 291021 291341 . + . ID=gene-CCO57_RS04340;Name=CCO57_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04340;old_locus_tag=CCO57_04340 NZ_NPMC01000002.1 Protein Homology CDS 291021 291341 . + 0 ID=cds-WP_000019285.1;Parent=gene-CCO57_RS04340;Dbxref=GenBank:WP_000019285.1;Name=WP_000019285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=CCO57_RS04340;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019285.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 291357 294728 . + . ID=gene-CCO57_RS04345;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=CCO57_RS04345;old_locus_tag=CCO57_04345 NZ_NPMC01000002.1 Protein Homology CDS 291357 294728 . + 0 ID=cds-WP_094914829.1;Parent=gene-CCO57_RS04345;Dbxref=GenBank:WP_094914829.1;Name=WP_094914829.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=CCO57_RS04345;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_094914829.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 294906 297794 . + . ID=gene-CCO57_RS04350;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=CCO57_RS04350;old_locus_tag=CCO57_04350 NZ_NPMC01000002.1 Protein Homology CDS 294906 297794 . + 0 ID=cds-WP_058111549.1;Parent=gene-CCO57_RS04350;Dbxref=GenBank:WP_058111549.1;Name=WP_058111549.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=CCO57_RS04350;product=pitrilysin;protein_id=WP_058111549.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 297787 301332 . + . ID=gene-CCO57_RS04355;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=CCO57_RS04355;old_locus_tag=CCO57_04355 NZ_NPMC01000002.1 Protein Homology CDS 297787 301332 . + 0 ID=cds-WP_094914830.1;Parent=gene-CCO57_RS04355;Dbxref=GenBank:WP_094914830.1;Name=WP_094914830.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=CCO57_RS04355;product=exodeoxyribonuclease V subunit beta;protein_id=WP_094914830.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 301329 303164 . + . ID=gene-CCO57_RS04360;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=CCO57_RS04360;old_locus_tag=CCO57_04360 NZ_NPMC01000002.1 Protein Homology CDS 301329 303164 . + 0 ID=cds-WP_000155151.1;Parent=gene-CCO57_RS04360;Dbxref=GenBank:WP_000155151.1;Name=WP_000155151.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=CCO57_RS04360;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000155151.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 303267 304598 . - . ID=gene-CCO57_RS04365;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=CCO57_RS04365;old_locus_tag=CCO57_04365 NZ_NPMC01000002.1 Protein Homology CDS 303267 304598 . - 0 ID=cds-WP_000588961.1;Parent=gene-CCO57_RS04365;Dbxref=GenBank:WP_000588961.1;Name=WP_000588961.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=CCO57_RS04365;product=amino-acid N-acetyltransferase;protein_id=WP_000588961.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 304831 306084 . + . ID=gene-CCO57_RS04370;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=CCO57_RS04370;old_locus_tag=CCO57_04370 NZ_NPMC01000002.1 Protein Homology CDS 304831 306084 . + 0 ID=cds-WP_000011919.1;Parent=gene-CCO57_RS04370;Dbxref=GenBank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=CCO57_RS04370;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 306194 306270 . - . ID=gene-CCO57_RS04375;Name=CCO57_RS04375;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS04375;old_locus_tag=CCO57_04375 NZ_NPMC01000002.1 tRNAscan-SE tRNA 306194 306270 . - . ID=rna-CCO57_RS04375;Parent=gene-CCO57_RS04375;anticodon=(pos:complement(306234..306236));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS04375;product=tRNA-Met NZ_NPMC01000002.1 tRNAscan-SE exon 306194 306270 . - . ID=exon-CCO57_RS04375-1;Parent=rna-CCO57_RS04375;anticodon=(pos:complement(306234..306236));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS04375;product=tRNA-Met NZ_NPMC01000002.1 RefSeq gene 306478 307575 . + . ID=gene-CCO57_RS04380;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=CCO57_RS04380;old_locus_tag=CCO57_04380 NZ_NPMC01000002.1 Protein Homology CDS 306478 307575 . + 0 ID=cds-WP_000678621.1;Parent=gene-CCO57_RS04380;Dbxref=GenBank:WP_000678621.1;Name=WP_000678621.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=CCO57_RS04380;product=murein transglycosylase A;protein_id=WP_000678621.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 307685 308491 . + . ID=gene-CCO57_RS04385;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=CCO57_RS04385;old_locus_tag=CCO57_04385 NZ_NPMC01000002.1 Protein Homology CDS 307685 308491 . + 0 ID=cds-WP_094914831.1;Parent=gene-CCO57_RS04385;Dbxref=GenBank:WP_094914831.1;Name=WP_094914831.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=CCO57_RS04385;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_094914831.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 308543 309430 . - . ID=gene-CCO57_RS04390;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO57_RS04390;old_locus_tag=CCO57_04390 NZ_NPMC01000002.1 Protein Homology CDS 308543 309430 . - 0 ID=cds-WP_014343890.1;Parent=gene-CCO57_RS04390;Dbxref=GenBank:WP_014343890.1;Name=WP_014343890.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=CCO57_RS04390;product=EamA family transporter RarD;protein_id=WP_014343890.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 309730 310173 . - . ID=gene-CCO57_RS04395;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=CCO57_RS04395;old_locus_tag=CCO57_04395 NZ_NPMC01000002.1 Protein Homology CDS 309730 310173 . - 0 ID=cds-WP_000184198.1;Parent=gene-CCO57_RS04395;Dbxref=GenBank:WP_000184198.1;Name=WP_000184198.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=CCO57_RS04395;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184198.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 310173 311378 . - . ID=gene-CCO57_RS04400;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=CCO57_RS04400;old_locus_tag=CCO57_04400 NZ_NPMC01000002.1 Protein Homology CDS 310173 311378 . - 0 ID=cds-WP_000991053.1;Parent=gene-CCO57_RS04400;Dbxref=GenBank:WP_000991053.1;Name=WP_000991053.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=CCO57_RS04400;product=cysteine desulfurase CsdA;protein_id=WP_000991053.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 311571 311798 . + . ID=gene-CCO57_RS04405;Name=CCO57_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04405;old_locus_tag=CCO57_04405 NZ_NPMC01000002.1 Protein Homology CDS 311571 311798 . + 0 ID=cds-WP_000750393.1;Parent=gene-CCO57_RS04405;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=CCO57_RS04405;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 312145 313062 . + . ID=gene-CCO57_RS04410;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=CCO57_RS04410;old_locus_tag=CCO57_04410 NZ_NPMC01000002.1 Protein Homology CDS 312145 313062 . + 0 ID=cds-WP_000044409.1;Parent=gene-CCO57_RS04410;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=CCO57_RS04410;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 313081 313476 . + . ID=gene-CCO57_RS04415;Name=CCO57_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04415;old_locus_tag=CCO57_04415 NZ_NPMC01000002.1 Protein Homology CDS 313081 313476 . + 0 ID=cds-WP_000203913.1;Parent=gene-CCO57_RS04415;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=CCO57_RS04415;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 313469 314569 . + . ID=gene-CCO57_RS04420;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=CCO57_RS04420;old_locus_tag=CCO57_04420 NZ_NPMC01000002.1 Protein Homology CDS 313469 314569 . + 0 ID=cds-WP_001045494.1;Parent=gene-CCO57_RS04420;Dbxref=GenBank:WP_001045494.1;Name=WP_001045494.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=CCO57_RS04420;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045494.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 314628 315338 . - . ID=gene-CCO57_RS04425;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=CCO57_RS04425;old_locus_tag=CCO57_04425 NZ_NPMC01000002.1 Protein Homology CDS 314628 315338 . - 0 ID=cds-WP_000642331.1;Parent=gene-CCO57_RS04425;Dbxref=GenBank:WP_000642331.1;Name=WP_000642331.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=CCO57_RS04425;product=L-fucose operon activator;protein_id=WP_000642331.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 315396 315818 . - . ID=gene-CCO57_RS04430;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=CCO57_RS04430;old_locus_tag=CCO57_04430 NZ_NPMC01000002.1 Protein Homology CDS 315396 315818 . - 0 ID=cds-WP_000920848.1;Parent=gene-CCO57_RS04430;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=CCO57_RS04430;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 315820 317238 . - . ID=gene-CCO57_RS04435;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=CCO57_RS04435;old_locus_tag=CCO57_04435 NZ_NPMC01000002.1 Protein Homology CDS 315820 317238 . - 0 ID=cds-WP_001635438.1;Parent=gene-CCO57_RS04435;Dbxref=GenBank:WP_001635438.1;Name=WP_001635438.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=CCO57_RS04435;product=L-fuculokinase;protein_id=WP_001635438.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 317339 319114 . - . ID=gene-CCO57_RS04440;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=CCO57_RS04440;old_locus_tag=CCO57_04440 NZ_NPMC01000002.1 Protein Homology CDS 317339 319114 . - 0 ID=cds-WP_000724131.1;Parent=gene-CCO57_RS04440;Dbxref=GenBank:WP_000724131.1;Name=WP_000724131.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=CCO57_RS04440;product=L-fucose isomerase;protein_id=WP_000724131.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 319146 320462 . - . ID=gene-CCO57_RS04445;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO57_RS04445;old_locus_tag=CCO57_04445 NZ_NPMC01000002.1 Protein Homology CDS 319146 320462 . - 0 ID=cds-WP_000528622.1;Parent=gene-CCO57_RS04445;Dbxref=GenBank:WP_000528622.1;Name=WP_000528622.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=CCO57_RS04445;product=L-fucose:H+ symporter permease;protein_id=WP_000528622.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 321018 321665 . + . ID=gene-CCO57_RS04450;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=CCO57_RS04450;old_locus_tag=CCO57_04450 NZ_NPMC01000002.1 Protein Homology CDS 321018 321665 . + 0 ID=cds-WP_000440827.1;Parent=gene-CCO57_RS04450;Dbxref=GenBank:WP_000440827.1;Name=WP_000440827.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=CCO57_RS04450;product=L-fuculose-phosphate aldolase;protein_id=WP_000440827.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 321682 322830 . + . ID=gene-CCO57_RS04455;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO57_RS04455;old_locus_tag=CCO57_04455 NZ_NPMC01000002.1 Protein Homology CDS 321682 322830 . + 0 ID=cds-WP_000013562.1;Parent=gene-CCO57_RS04455;Dbxref=GenBank:WP_000013562.1;Name=WP_000013562.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=CCO57_RS04455;product=lactaldehyde reductase;protein_id=WP_000013562.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 322922 323677 . - . ID=gene-CCO57_RS04460;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=CCO57_RS04460;old_locus_tag=CCO57_04460 NZ_NPMC01000002.1 Protein Homology CDS 322922 323677 . - 0 ID=cds-WP_001519360.1;Parent=gene-CCO57_RS04460;Dbxref=GenBank:WP_001519360.1;Name=WP_001519360.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=CCO57_RS04460;product=flap endonuclease Xni;protein_id=WP_001519360.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 323847 325214 . - . ID=gene-CCO57_RS04470;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=CCO57_RS04470;old_locus_tag=CCO57_04470 NZ_NPMC01000002.1 Protein Homology CDS 323847 325214 . - 0 ID=cds-WP_000626384.1;Parent=gene-CCO57_RS04470;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=CCO57_RS04470;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 325273 326562 . - . ID=gene-CCO57_RS04475;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=CCO57_RS04475;old_locus_tag=CCO57_04475 NZ_NPMC01000002.1 Protein Homology CDS 325273 326562 . - 0 ID=cds-WP_000450462.1;Parent=gene-CCO57_RS04475;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=CCO57_RS04475;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 327127 328491 . - . ID=gene-CCO57_RS04480;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=CCO57_RS04480;old_locus_tag=CCO57_04480 NZ_NPMC01000002.1 Protein Homology CDS 327127 328491 . - 0 ID=cds-WP_000627973.1;Parent=gene-CCO57_RS04480;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=CCO57_RS04480;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 328604 329452 . - . ID=gene-CCO57_RS04485;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CCO57_RS04485;old_locus_tag=CCO57_04485 NZ_NPMC01000002.1 Protein Homology CDS 328604 329452 . - 0 ID=cds-WP_000100465.1;Parent=gene-CCO57_RS04485;Dbxref=GenBank:WP_000100465.1;Name=WP_000100465.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=CCO57_RS04485;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100465.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 329521 330066 . + . ID=gene-CCO57_RS04490;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=CCO57_RS04490;old_locus_tag=CCO57_04490 NZ_NPMC01000002.1 Protein Homology CDS 329521 330066 . + 0 ID=cds-WP_000343990.1;Parent=gene-CCO57_RS04490;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=CCO57_RS04490;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 330678 331007 . + . ID=gene-CCO57_RS04500;Name=CCO57_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04500;old_locus_tag=CCO57_04500 NZ_NPMC01000002.1 Protein Homology CDS 330678 331007 . + 0 ID=cds-WP_000207010.1;Parent=gene-CCO57_RS04500;Dbxref=GenBank:WP_000207010.1;Name=WP_000207010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=CCO57_RS04500;product=YqcC family protein;protein_id=WP_000207010.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 331007 331789 . + . ID=gene-CCO57_RS04505;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=CCO57_RS04505;old_locus_tag=CCO57_04505 NZ_NPMC01000002.1 Protein Homology CDS 331007 331789 . + 0 ID=cds-WP_000890034.1;Parent=gene-CCO57_RS04505;Dbxref=GenBank:WP_000890034.1;Name=WP_000890034.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=CCO57_RS04505;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890034.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 331808 332257 . + . ID=gene-CCO57_RS04510;Name=CCO57_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04510;old_locus_tag=CCO57_04510 NZ_NPMC01000002.1 Protein Homology CDS 331808 332257 . + 0 ID=cds-WP_000807739.1;Parent=gene-CCO57_RS04510;Dbxref=GenBank:WP_000807739.1;Name=WP_000807739.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=CCO57_RS04510;product=flavodoxin;protein_id=WP_000807739.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 332739 334097 . + . ID=gene-CCO57_RS04520;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=CCO57_RS04520;old_locus_tag=CCO57_04520 NZ_NPMC01000002.1 Protein Homology CDS 332739 334097 . + 0 ID=cds-WP_000097015.1;Parent=gene-CCO57_RS04520;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=CCO57_RS04520;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 334094 335434 . + . ID=gene-CCO57_RS04525;Name=CCO57_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04525;old_locus_tag=CCO57_04525 NZ_NPMC01000002.1 Protein Homology CDS 334094 335434 . + 0 ID=cds-WP_094914832.1;Parent=gene-CCO57_RS04525;Dbxref=GenBank:WP_094914832.1;Name=WP_094914832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=CCO57_RS04525;product=enolase C-terminal domain-like protein;protein_id=WP_094914832.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 335455 336795 . + . ID=gene-CCO57_RS04530;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=CCO57_RS04530;old_locus_tag=CCO57_04530 NZ_NPMC01000002.1 Protein Homology CDS 335455 336795 . + 0 ID=cds-WP_094914833.1;Parent=gene-CCO57_RS04530;Dbxref=GenBank:WP_094914833.1;Name=WP_094914833.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=CCO57_RS04530;product=glucarate dehydratase;protein_id=WP_094914833.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 336873 338015 . + . ID=gene-CCO57_RS04535;Name=CCO57_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04535;old_locus_tag=CCO57_04535 NZ_NPMC01000002.1 Protein Homology CDS 336873 338015 . + 0 ID=cds-WP_000706486.1;Parent=gene-CCO57_RS04535;Dbxref=GenBank:WP_000706486.1;Name=WP_000706486.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=CCO57_RS04535;product=glycerate kinase;protein_id=WP_000706486.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 338059 340815 . - . ID=gene-CCO57_RS04540;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=CCO57_RS04540;old_locus_tag=CCO57_04540 NZ_NPMC01000002.1 Protein Homology CDS 338059 340815 . - 0 ID=cds-WP_000186399.1;Parent=gene-CCO57_RS04540;Dbxref=GenBank:WP_000186399.1;Name=WP_000186399.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=CCO57_RS04540;product=two-component sensor histidine kinase BarA;protein_id=WP_000186399.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 340873 342168 . + . ID=gene-CCO57_RS04545;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CCO57_RS04545;old_locus_tag=CCO57_04545 NZ_NPMC01000002.1 Protein Homology CDS 340873 342168 . + 0 ID=cds-WP_015406304.1;Parent=gene-CCO57_RS04545;Dbxref=GenBank:WP_015406304.1;Name=WP_015406304.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=CCO57_RS04545;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_015406304.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 342220 344454 . + . ID=gene-CCO57_RS04550;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=CCO57_RS04550;old_locus_tag=CCO57_04550 NZ_NPMC01000002.1 Protein Homology CDS 342220 344454 . + 0 ID=cds-WP_000226841.1;Parent=gene-CCO57_RS04550;Dbxref=GenBank:WP_000226841.1;Name=WP_000226841.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=CCO57_RS04550;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 344539 344895 . + . ID=gene-CCO57_RS04555;Name=CCO57_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04555;old_locus_tag=CCO57_04555 NZ_NPMC01000002.1 Protein Homology CDS 344539 344895 . + 0 ID=cds-WP_000480218.1;Parent=gene-CCO57_RS04555;Dbxref=GenBank:WP_000480218.1;Name=WP_000480218.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=CCO57_RS04555;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_000480218.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 344861 345157 . + . ID=gene-CCO57_RS04560;Name=CCO57_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04560;old_locus_tag=CCO57_04560 NZ_NPMC01000002.1 Protein Homology CDS 344861 345157 . + 0 ID=cds-WP_001261199.1;Parent=gene-CCO57_RS04560;Dbxref=GenBank:WP_001261199.1;Name=WP_001261199.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=CCO57_RS04560;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001261199.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 345176 345319 . - . ID=gene-CCO57_RS24525;Name=CCO57_RS24525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24525;old_locus_tag=CCO57_04565;partial=true;pseudo=true;start_range=.,345176 NZ_NPMC01000002.1 Protein Homology CDS 345176 345319 . - 0 ID=cds-CCO57_RS24525;Parent=gene-CCO57_RS24525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=CCO57_RS24525;partial=true;product=fimbrial protein SteA;pseudo=true;start_range=.,345176;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 345913 346713 . + . ID=gene-CCO57_RS04570;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=CCO57_RS04570;old_locus_tag=CCO57_04570 NZ_NPMC01000002.1 Protein Homology CDS 345913 346713 . + 0 ID=cds-WP_023233373.1;Parent=gene-CCO57_RS04570;Dbxref=GenBank:WP_023233373.1;Name=WP_023233373.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=CCO57_RS04570;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_023233373.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 346941 348578 . + . ID=gene-CCO57_RS04575;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CCO57_RS04575;old_locus_tag=CCO57_04575 NZ_NPMC01000002.1 Protein Homology CDS 346941 348578 . + 0 ID=cds-WP_000210864.1;Parent=gene-CCO57_RS04575;Dbxref=GenBank:WP_000210864.1;Name=WP_000210864.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=CCO57_RS04575;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210864.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 348661 349959 . + . ID=gene-CCO57_RS04580;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CCO57_RS04580;old_locus_tag=CCO57_04580 NZ_NPMC01000002.1 Protein Homology CDS 348661 349959 . + 0 ID=cds-WP_000036734.1;Parent=gene-CCO57_RS04580;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=CCO57_RS04580;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 350095 350766 . + . ID=gene-CCO57_RS04585;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CCO57_RS04585;old_locus_tag=CCO57_04585 NZ_NPMC01000002.1 Protein Homology CDS 350095 350766 . + 0 ID=cds-WP_001199956.1;Parent=gene-CCO57_RS04585;Dbxref=GenBank:WP_001199956.1;Name=WP_001199956.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=CCO57_RS04585;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199956.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 351147 351944 . + . ID=gene-CCO57_RS04595;Name=CCO57_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04595;old_locus_tag=CCO57_04595 NZ_NPMC01000002.1 Protein Homology CDS 351147 351944 . + 0 ID=cds-WP_001522969.1;Parent=gene-CCO57_RS04595;Dbxref=GenBank:WP_001522969.1;Name=WP_001522969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=CCO57_RS04595;product=MBL fold metallo-hydrolase;protein_id=WP_001522969.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 352032 352394 . - . ID=gene-CCO57_RS04600;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CCO57_RS04600;old_locus_tag=CCO57_04600 NZ_NPMC01000002.1 Protein Homology CDS 352032 352394 . - 0 ID=cds-WP_000108313.1;Parent=gene-CCO57_RS04600;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=CCO57_RS04600;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 352830 354629 . + . ID=gene-CCO57_RS04610;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=CCO57_RS04610;old_locus_tag=CCO57_04610 NZ_NPMC01000002.1 Protein Homology CDS 352830 354629 . + 0 ID=cds-WP_023207768.1;Parent=gene-CCO57_RS04610;Dbxref=GenBank:WP_023207768.1;Name=WP_023207768.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=CCO57_RS04610;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_023207768.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 354629 356341 . + . ID=gene-CCO57_RS04615;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=CCO57_RS04615;old_locus_tag=CCO57_04615 NZ_NPMC01000002.1 Protein Homology CDS 354629 356341 . + 0 ID=cds-WP_023207767.1;Parent=gene-CCO57_RS04615;Dbxref=GenBank:WP_023207767.1;Name=WP_023207767.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=CCO57_RS04615;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_023207767.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 356417 357151 . + . ID=gene-CCO57_RS04625;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=CCO57_RS04625;old_locus_tag=CCO57_04625 NZ_NPMC01000002.1 Protein Homology CDS 356417 357151 . + 0 ID=cds-WP_000080397.1;Parent=gene-CCO57_RS04625;Dbxref=GenBank:WP_000080397.1;Name=WP_000080397.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=CCO57_RS04625;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000080397.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 357239 358192 . - . ID=gene-CCO57_RS04630;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=CCO57_RS04630;old_locus_tag=CCO57_04630 NZ_NPMC01000002.1 Protein Homology CDS 357239 358192 . - 0 ID=cds-WP_023207766.1;Parent=gene-CCO57_RS04630;Dbxref=GenBank:WP_023207766.1;Name=WP_023207766.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=CCO57_RS04630;product=SPI-1 type III secretion system effector SopD;protein_id=WP_023207766.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 358576 360168 . - . ID=gene-CCO57_RS04635;Name=cas3;end_range=360168,.;gbkey=Gene;gene=cas3;gene_biotype=pseudogene;locus_tag=CCO57_RS04635;old_locus_tag=CCO57_04635;partial=true;pseudo=true NZ_NPMC01000002.1 Protein Homology CDS 358576 360168 . - 0 ID=cds-CCO57_RS04635;Parent=gene-CCO57_RS04635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0043571,GO:0004386;end_range=360168,.;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192071.1;locus_tag=CCO57_RS04635;partial=true;product=CRISPR-associated helicase Cas3';pseudo=true;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 360270 361316 . - . ID=gene-CCO57_RS04640;Name=CCO57_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04640;old_locus_tag=CCO57_04640 NZ_NPMC01000002.1 Protein Homology CDS 360270 361316 . - 0 ID=cds-WP_000490483.1;Parent=gene-CCO57_RS04640;Dbxref=GenBank:WP_000490483.1;Name=WP_000490483.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=CCO57_RS04640;product=aminopeptidase;protein_id=WP_000490483.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 361567 362475 . + . ID=gene-CCO57_RS04645;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=CCO57_RS04645;old_locus_tag=CCO57_04645 NZ_NPMC01000002.1 Protein Homology CDS 361567 362475 . + 0 ID=cds-WP_000372384.1;Parent=gene-CCO57_RS04645;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=CCO57_RS04645;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 362485 363924 . + . ID=gene-CCO57_RS04650;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=CCO57_RS04650;old_locus_tag=CCO57_04650 NZ_NPMC01000002.1 Protein Homology CDS 362485 363924 . + 0 ID=cds-WP_001528082.1;Parent=gene-CCO57_RS04650;Dbxref=GenBank:WP_001528082.1;Name=WP_001528082.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=CCO57_RS04650;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001528082.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 363911 364516 . + . ID=gene-CCO57_RS04655;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=CCO57_RS04655;old_locus_tag=CCO57_04655 NZ_NPMC01000002.1 Protein Homology CDS 363911 364516 . + 0 ID=cds-WP_001173661.1;Parent=gene-CCO57_RS04655;Dbxref=GenBank:WP_001173661.1;Name=WP_001173661.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=CCO57_RS04655;product=adenylyl-sulfate kinase;protein_id=WP_001173661.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 364567 364890 . + . ID=gene-CCO57_RS04660;Name=CCO57_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04660;old_locus_tag=CCO57_04660 NZ_NPMC01000002.1 Protein Homology CDS 364567 364890 . + 0 ID=cds-WP_001537530.1;Parent=gene-CCO57_RS04660;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=CCO57_RS04660;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 365081 365392 . + . ID=gene-CCO57_RS04665;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=CCO57_RS04665;old_locus_tag=CCO57_04665 NZ_NPMC01000002.1 Protein Homology CDS 365081 365392 . + 0 ID=cds-WP_000517480.1;Parent=gene-CCO57_RS04665;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=CCO57_RS04665;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 365411 366121 . + . ID=gene-CCO57_RS04670;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CCO57_RS04670;old_locus_tag=CCO57_04670 NZ_NPMC01000002.1 Protein Homology CDS 365411 366121 . + 0 ID=cds-WP_000741649.1;Parent=gene-CCO57_RS04670;Dbxref=GenBank:WP_000741649.1;Name=WP_000741649.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=CCO57_RS04670;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741649.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 366121 366600 . + . ID=gene-CCO57_RS04675;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CCO57_RS04675;old_locus_tag=CCO57_04675 NZ_NPMC01000002.1 Protein Homology CDS 366121 366600 . + 0 ID=cds-WP_023207764.1;Parent=gene-CCO57_RS04675;Dbxref=GenBank:WP_023207764.1;Name=WP_023207764.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=CCO57_RS04675;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_023207764.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 366597 367646 . + . ID=gene-CCO57_RS04680;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=CCO57_RS04680;old_locus_tag=CCO57_04680 NZ_NPMC01000002.1 Protein Homology CDS 366597 367646 . + 0 ID=cds-WP_000134246.1;Parent=gene-CCO57_RS04680;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=CCO57_RS04680;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 367627 368388 . + . ID=gene-CCO57_RS04685;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=CCO57_RS04685;old_locus_tag=CCO57_04685 NZ_NPMC01000002.1 Protein Homology CDS 367627 368388 . + 0 ID=cds-WP_001221538.1;Parent=gene-CCO57_RS04685;Dbxref=GenBank:WP_001221538.1;Name=WP_001221538.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=CCO57_RS04685;product=5'/3'-nucleotidase SurE;protein_id=WP_001221538.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 368382 369008 . + . ID=gene-CCO57_RS04690;Name=CCO57_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04690;old_locus_tag=CCO57_04690 NZ_NPMC01000002.1 Protein Homology CDS 368382 369008 . + 0 ID=cds-WP_000253542.1;Parent=gene-CCO57_RS04690;Dbxref=GenBank:WP_000253542.1;Name=WP_000253542.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=CCO57_RS04690;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253542.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 369147 369305 . - . ID=gene-CCO57_RS24530;Name=CCO57_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24530 NZ_NPMC01000002.1 Protein Homology CDS 369147 369305 . - 0 ID=cds-WP_223148970.1;Parent=gene-CCO57_RS24530;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=CCO57_RS24530;product=peptidase;protein_id=WP_223148970.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 369235 370317 . + . ID=gene-CCO57_RS04695;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=CCO57_RS04695;old_locus_tag=CCO57_04695 NZ_NPMC01000002.1 Protein Homology CDS 369235 370317 . + 0 ID=cds-WP_223151197.1;Parent=gene-CCO57_RS04695;Dbxref=GenBank:WP_223151197.1;Name=WP_223151197.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=CCO57_RS04695;product=murein hydrolase activator NlpD;protein_id=WP_223151197.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 370380 371372 . + . ID=gene-CCO57_RS04700;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=CCO57_RS04700;old_locus_tag=CCO57_04700 NZ_NPMC01000002.1 Protein Homology CDS 370380 371372 . + 0 ID=cds-WP_000081498.1;Parent=gene-CCO57_RS04700;Dbxref=GenBank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=CCO57_RS04700;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 371416 371652 . - . ID=gene-CCO57_RS04705;Name=CCO57_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04705;old_locus_tag=CCO57_04705 NZ_NPMC01000002.1 Protein Homology CDS 371416 371652 . - 0 ID=cds-WP_000562967.1;Parent=gene-CCO57_RS04705;Dbxref=GenBank:WP_000562967.1;Name=WP_000562967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=CCO57_RS04705;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562967.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 371663 373090 . - . ID=gene-CCO57_RS04710;Name=CCO57_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04710;old_locus_tag=CCO57_04710 NZ_NPMC01000002.1 Protein Homology CDS 371663 373090 . - 0 ID=cds-WP_000863168.1;Parent=gene-CCO57_RS04710;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=CCO57_RS04710;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 373090 373683 . - . ID=gene-CCO57_RS04715;Name=CCO57_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04715;old_locus_tag=CCO57_04715 NZ_NPMC01000002.1 Protein Homology CDS 373090 373683 . - 0 ID=cds-WP_001237181.1;Parent=gene-CCO57_RS04715;Dbxref=GenBank:WP_001237181.1;Name=WP_001237181.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=CCO57_RS04715;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237181.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 373854 374258 . + . ID=gene-CCO57_RS04720;Name=CCO57_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04720;old_locus_tag=CCO57_04720 NZ_NPMC01000002.1 Protein Homology CDS 373854 374258 . + 0 ID=cds-WP_000423338.1;Parent=gene-CCO57_RS04720;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=CCO57_RS04720;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 374277 375041 . - . ID=gene-CCO57_RS04725;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=CCO57_RS04725;old_locus_tag=CCO57_04725 NZ_NPMC01000002.1 Protein Homology CDS 374277 375041 . - 0 ID=cds-WP_000613179.1;Parent=gene-CCO57_RS04725;Dbxref=GenBank:WP_000613179.1;Name=WP_000613179.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=CCO57_RS04725;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613179.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 375238 376161 . + . ID=gene-CCO57_RS04730;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=CCO57_RS04730;old_locus_tag=CCO57_04730 NZ_NPMC01000002.1 Protein Homology CDS 375238 376161 . + 0 ID=cds-WP_023207763.1;Parent=gene-CCO57_RS04730;Dbxref=GenBank:WP_023207763.1;Name=WP_023207763.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=CCO57_RS04730;product=L-threonate dehydrogenase;protein_id=WP_023207763.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 376155 377417 . + . ID=gene-CCO57_RS04735;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=CCO57_RS04735;old_locus_tag=CCO57_04735 NZ_NPMC01000002.1 Protein Homology CDS 376155 377417 . + 0 ID=cds-WP_023207762.1;Parent=gene-CCO57_RS04735;Dbxref=GenBank:WP_023207762.1;Name=WP_023207762.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=CCO57_RS04735;product=3-oxo-tetronate kinase;protein_id=WP_023207762.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 377414 378052 . + . ID=gene-CCO57_RS04740;Name=CCO57_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04740;old_locus_tag=CCO57_04740 NZ_NPMC01000002.1 Protein Homology CDS 377414 378052 . + 0 ID=cds-WP_000209068.1;Parent=gene-CCO57_RS04740;Dbxref=GenBank:WP_000209068.1;Name=WP_000209068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=CCO57_RS04740;product=aldolase;protein_id=WP_000209068.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 378057 378833 . + . ID=gene-CCO57_RS04745;Name=CCO57_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04745;old_locus_tag=CCO57_04745 NZ_NPMC01000002.1 Protein Homology CDS 378057 378833 . + 0 ID=cds-WP_023207761.1;Parent=gene-CCO57_RS04745;Dbxref=GenBank:WP_023207761.1;Name=WP_023207761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=CCO57_RS04745;product=HPr family phosphocarrier protein;protein_id=WP_023207761.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 378873 379823 . + . ID=gene-CCO57_RS04750;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=CCO57_RS04750;old_locus_tag=CCO57_04750 NZ_NPMC01000002.1 Protein Homology CDS 378873 379823 . + 0 ID=cds-WP_023207760.1;Parent=gene-CCO57_RS04750;Dbxref=GenBank:WP_023207760.1;Name=WP_023207760.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=CCO57_RS04750;product=D-erythronate dehydrogenase;protein_id=WP_023207760.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 379820 381316 . + . ID=gene-CCO57_RS04755;Name=CCO57_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04755;old_locus_tag=CCO57_04755 NZ_NPMC01000002.1 Protein Homology CDS 379820 381316 . + 0 ID=cds-WP_000202725.1;Parent=gene-CCO57_RS04755;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=CCO57_RS04755;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 381358 382290 . - . ID=gene-CCO57_RS04760;Name=CCO57_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04760;old_locus_tag=CCO57_04760 NZ_NPMC01000002.1 Protein Homology CDS 381358 382290 . - 0 ID=cds-WP_080243281.1;Parent=gene-CCO57_RS04760;Dbxref=GenBank:WP_080243281.1;Name=WP_080243281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=CCO57_RS04760;product=LysR family transcriptional regulator;protein_id=WP_080243281.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 382378 383586 . + . ID=gene-CCO57_RS04765;Name=CCO57_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04765;old_locus_tag=CCO57_04765 NZ_NPMC01000002.1 Protein Homology CDS 382378 383586 . + 0 ID=cds-WP_023233377.1;Parent=gene-CCO57_RS04765;Dbxref=GenBank:WP_023233377.1;Name=WP_023233377.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222390.1;locus_tag=CCO57_RS04765;product=MFS transporter;protein_id=WP_023233377.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 383583 383963 . + . ID=gene-CCO57_RS04770;Name=CCO57_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04770;old_locus_tag=CCO57_04770 NZ_NPMC01000002.1 Protein Homology CDS 383583 383963 . + 0 ID=cds-WP_023233378.1;Parent=gene-CCO57_RS04770;Dbxref=GenBank:WP_023233378.1;Name=WP_023233378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=CCO57_RS04770;product=DUF4440 domain-containing protein;protein_id=WP_023233378.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 384019 386586 . - . ID=gene-CCO57_RS04775;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CCO57_RS04775;old_locus_tag=CCO57_04775 NZ_NPMC01000002.1 Protein Homology CDS 384019 386586 . - 0 ID=cds-WP_023197268.1;Parent=gene-CCO57_RS04775;Dbxref=GenBank:WP_023197268.1;Name=WP_023197268.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=CCO57_RS04775;product=DNA mismatch repair protein MutS;protein_id=WP_023197268.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 386745 387143 . + . ID=gene-CCO57_RS04780;Name=CCO57_RS04780;end_range=387143,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS04780;old_locus_tag=CCO57_04780;partial=true;pseudo=true NZ_NPMC01000002.1 Protein Homology CDS 386745 387143 . + 0 ID=cds-CCO57_RS04780;Parent=gene-CCO57_RS04780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=387143,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=CCO57_RS04780;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 387270 387392 . + . ID=gene-CCO57_RS24295;Name=CCO57_RS24295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24295;partial=true;pseudo=true;start_range=.,387270 NZ_NPMC01000002.1 Protein Homology CDS 387270 387392 . + 0 ID=cds-CCO57_RS24295;Parent=gene-CCO57_RS24295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=CCO57_RS24295;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,387270;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 387563 388219 . - . ID=gene-CCO57_RS04790;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=CCO57_RS04790;old_locus_tag=CCO57_04790 NZ_NPMC01000002.1 Protein Homology CDS 387563 388219 . - 0 ID=cds-WP_023233229.1;Parent=gene-CCO57_RS04790;Dbxref=GenBank:WP_023233229.1;Name=WP_023233229.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=CCO57_RS04790;product=protein-serine/threonine phosphatase;protein_id=WP_023233229.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 388443 388873 . + . ID=gene-CCO57_RS04795;Name=CCO57_RS04795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS04795;old_locus_tag=CCO57_04795;partial=true;pseudo=true;start_range=.,388443 NZ_NPMC01000002.1 Protein Homology CDS 388443 388873 . + 0 ID=cds-CCO57_RS04795;Parent=gene-CCO57_RS04795;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=CCO57_RS04795;partial=true;product=transposase;pseudo=true;start_range=.,388443;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 388946 389038 . - . ID=gene-CCO57_RS04800;Name=CCO57_RS04800;end_range=389038,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS04800;partial=true;pseudo=true NZ_NPMC01000002.1 Protein Homology CDS 388946 389038 . - 0 ID=cds-CCO57_RS04800;Parent=gene-CCO57_RS04800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=389038,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=CCO57_RS04800;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 389088 389435 . - . ID=gene-CCO57_RS04805;Name=CCO57_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04805;old_locus_tag=CCO57_04800 NZ_NPMC01000002.1 Protein Homology CDS 389088 389435 . - 0 ID=cds-WP_094914834.1;Parent=gene-CCO57_RS04805;Dbxref=GenBank:WP_094914834.1;Name=WP_094914834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=CCO57_RS04805;product=DUF1493 family protein;protein_id=WP_094914834.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 389420 389869 . - . ID=gene-CCO57_RS04810;Name=CCO57_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04810;old_locus_tag=CCO57_04805 NZ_NPMC01000002.1 Protein Homology CDS 389420 389869 . - 0 ID=cds-WP_000381614.1;Parent=gene-CCO57_RS04810;Dbxref=GenBank:WP_000381614.1;Name=WP_000381614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=CCO57_RS04810;product=STM2901 family protein;protein_id=WP_000381614.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 390300 390743 . - . ID=gene-CCO57_RS04815;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=CCO57_RS04815;old_locus_tag=CCO57_04810 NZ_NPMC01000002.1 Protein Homology CDS 390300 390743 . - 0 ID=cds-WP_000715096.1;Parent=gene-CCO57_RS04815;Dbxref=GenBank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=CCO57_RS04815;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 391200 391850 . + . ID=gene-CCO57_RS04820;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=CCO57_RS04820;old_locus_tag=CCO57_04815 NZ_NPMC01000002.1 Protein Homology CDS 391200 391850 . + 0 ID=cds-WP_023166786.1;Parent=gene-CCO57_RS04820;Dbxref=GenBank:WP_023166786.1;Name=WP_023166786.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=CCO57_RS04820;product=type III secretion system transcriptional activator InvF;protein_id=WP_023166786.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 391847 393535 . + . ID=gene-CCO57_RS04825;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=CCO57_RS04825;old_locus_tag=CCO57_04820 NZ_NPMC01000002.1 Protein Homology CDS 391847 393535 . + 0 ID=cds-WP_000848101.1;Parent=gene-CCO57_RS04825;Dbxref=GenBank:WP_000848101.1;Name=WP_000848101.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=CCO57_RS04825;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848101.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 393532 394650 . + . ID=gene-CCO57_RS04830;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=CCO57_RS04830;old_locus_tag=CCO57_04825 NZ_NPMC01000002.1 Protein Homology CDS 393532 394650 . + 0 ID=cds-WP_000612171.1;Parent=gene-CCO57_RS04830;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=CCO57_RS04830;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 394675 396732 . + . ID=gene-CCO57_RS04835;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=CCO57_RS04835;old_locus_tag=CCO57_04830 NZ_NPMC01000002.1 Protein Homology CDS 394675 396732 . + 0 ID=cds-WP_000927219.1;Parent=gene-CCO57_RS04835;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=CCO57_RS04835;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 396756 397163 . + . ID=gene-CCO57_RS04840;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=CCO57_RS04840;old_locus_tag=CCO57_04835 NZ_NPMC01000002.1 Protein Homology CDS 396756 397163 . + 0 ID=cds-WP_001164066.1;Parent=gene-CCO57_RS04840;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=CCO57_RS04840;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 397160 398455 . + . ID=gene-CCO57_RS04845;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=CCO57_RS04845;old_locus_tag=CCO57_04840 NZ_NPMC01000002.1 Protein Homology CDS 397160 398455 . + 0 ID=cds-WP_000856766.1;Parent=gene-CCO57_RS04845;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=CCO57_RS04845;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 398433 398876 . + . ID=gene-CCO57_RS04850;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=CCO57_RS04850;old_locus_tag=CCO57_04845 NZ_NPMC01000002.1 Protein Homology CDS 398433 398876 . + 0 ID=cds-WP_000555884.1;Parent=gene-CCO57_RS04850;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=CCO57_RS04850;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 398876 399886 . + . ID=gene-CCO57_RS04855;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=CCO57_RS04855;old_locus_tag=CCO57_04850 NZ_NPMC01000002.1 Protein Homology CDS 398876 399886 . + 0 ID=cds-WP_052942710.1;Parent=gene-CCO57_RS04855;Dbxref=GenBank:WP_052942710.1;Name=WP_052942710.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=CCO57_RS04855;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_052942710.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 399886 400797 . + . ID=gene-CCO57_RS04860;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=CCO57_RS04860;old_locus_tag=CCO57_04855 NZ_NPMC01000002.1 Protein Homology CDS 399886 400797 . + 0 ID=cds-WP_000058731.1;Parent=gene-CCO57_RS04860;Dbxref=GenBank:WP_000058731.1;Name=WP_000058731.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=CCO57_RS04860;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058731.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 400787 401461 . + . ID=gene-CCO57_RS04865;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=CCO57_RS04865;old_locus_tag=CCO57_04860 NZ_NPMC01000002.1 Protein Homology CDS 400787 401461 . + 0 ID=cds-WP_000526016.1;Parent=gene-CCO57_RS04865;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=CCO57_RS04865;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 401487 401747 . + . ID=gene-CCO57_RS04870;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=CCO57_RS04870;old_locus_tag=CCO57_04865 NZ_NPMC01000002.1 Protein Homology CDS 401487 401747 . + 0 ID=cds-WP_000342503.1;Parent=gene-CCO57_RS04870;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=CCO57_RS04870;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 401751 402542 . + . ID=gene-CCO57_RS04875;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=CCO57_RS04875;old_locus_tag=CCO57_04870 NZ_NPMC01000002.1 Protein Homology CDS 401751 402542 . + 0 ID=cds-WP_000498965.1;Parent=gene-CCO57_RS04875;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=CCO57_RS04875;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 402529 403599 . + . ID=gene-CCO57_RS04880;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=CCO57_RS04880;old_locus_tag=CCO57_04875 NZ_NPMC01000002.1 Protein Homology CDS 402529 403599 . + 0 ID=cds-WP_000097719.1;Parent=gene-CCO57_RS04880;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=CCO57_RS04880;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 403737 404234 . + . ID=gene-CCO57_RS04885;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=CCO57_RS04885;old_locus_tag=CCO57_04880 NZ_NPMC01000002.1 Protein Homology CDS 403737 404234 . + 0 ID=cds-WP_000386309.1;Parent=gene-CCO57_RS04885;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=CCO57_RS04885;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 404237 406018 . + . ID=gene-CCO57_RS04890;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=CCO57_RS04890;old_locus_tag=CCO57_04885 NZ_NPMC01000002.1 Protein Homology CDS 404237 406018 . + 0 ID=cds-WP_000245782.1;Parent=gene-CCO57_RS04890;Dbxref=GenBank:WP_000245782.1;Name=WP_000245782.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=CCO57_RS04890;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245782.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 406046 407275 . + . ID=gene-CCO57_RS04895;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=CCO57_RS04895;old_locus_tag=CCO57_04890 NZ_NPMC01000002.1 Protein Homology CDS 406046 407275 . + 0 ID=cds-WP_000909019.1;Parent=gene-CCO57_RS04895;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=CCO57_RS04895;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 407346 408377 . + . ID=gene-CCO57_RS04900;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=CCO57_RS04900;old_locus_tag=CCO57_04895 NZ_NPMC01000002.1 Protein Homology CDS 407346 408377 . + 0 ID=cds-WP_000932249.1;Parent=gene-CCO57_RS04900;Dbxref=GenBank:WP_000932249.1;Name=WP_000932249.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=CCO57_RS04900;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_000932249.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 408396 410453 . + . ID=gene-CCO57_RS04905;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=CCO57_RS04905;old_locus_tag=CCO57_04900 NZ_NPMC01000002.1 Protein Homology CDS 408396 410453 . + 0 ID=cds-WP_094888645.1;Parent=gene-CCO57_RS04905;Dbxref=GenBank:WP_094888645.1;Name=WP_094888645.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=CCO57_RS04905;product=SPI-1 type III secretion system effector SipA;protein_id=WP_094888645.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 410472 410720 . + . ID=gene-CCO57_RS04910;Name=CCO57_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04910;old_locus_tag=CCO57_04905 NZ_NPMC01000002.1 Protein Homology CDS 410472 410720 . + 0 ID=cds-WP_001055579.1;Parent=gene-CCO57_RS04910;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=CCO57_RS04910;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 410764 411024 . + . ID=gene-CCO57_RS04915;Name=CCO57_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04915;old_locus_tag=CCO57_04910 NZ_NPMC01000002.1 Protein Homology CDS 410764 411024 . + 0 ID=cds-WP_000692250.1;Parent=gene-CCO57_RS04915;Dbxref=GenBank:WP_000692250.1;Name=WP_000692250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=CCO57_RS04915;product=hypothetical protein;protein_id=WP_000692250.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 411051 411443 . + . ID=gene-CCO57_RS04920;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=CCO57_RS04920;old_locus_tag=CCO57_04915 NZ_NPMC01000002.1 Protein Homology CDS 411051 411443 . + 0 ID=cds-WP_001147854.1;Parent=gene-CCO57_RS04920;Dbxref=GenBank:WP_001147854.1;Name=WP_001147854.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=CCO57_RS04920;product=chaperone SicP;protein_id=WP_001147854.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 411430 413061 . + . ID=gene-CCO57_RS04925;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=CCO57_RS04925;old_locus_tag=CCO57_04920 NZ_NPMC01000002.1 Protein Homology CDS 411430 413061 . + 0 ID=cds-WP_094914835.1;Parent=gene-CCO57_RS04925;Dbxref=GenBank:WP_094914835.1;Name=WP_094914835.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=CCO57_RS04925;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_094914835.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 413115 413597 . - . ID=gene-CCO57_RS04930;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=CCO57_RS04930;old_locus_tag=CCO57_04925 NZ_NPMC01000002.1 Protein Homology CDS 413115 413597 . - 0 ID=cds-WP_000558932.1;Parent=gene-CCO57_RS04930;Dbxref=GenBank:WP_000558932.1;Name=WP_000558932.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=CCO57_RS04930;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558932.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 413615 415276 . - . ID=gene-CCO57_RS04935;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=CCO57_RS04935;old_locus_tag=CCO57_04930 NZ_NPMC01000002.1 Protein Homology CDS 413615 415276 . - 0 ID=cds-WP_001120085.1;Parent=gene-CCO57_RS04935;Dbxref=GenBank:WP_001120085.1;Name=WP_001120085.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=CCO57_RS04935;product=transcriptional regulator HilA;protein_id=WP_001120085.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 416365 417294 . - . ID=gene-CCO57_RS04940;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=CCO57_RS04940;old_locus_tag=CCO57_04935 NZ_NPMC01000002.1 Protein Homology CDS 416365 417294 . - 0 ID=cds-WP_094914836.1;Parent=gene-CCO57_RS04940;Dbxref=GenBank:WP_094914836.1;Name=WP_094914836.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=CCO57_RS04940;product=transcriptional regulator HilD;protein_id=WP_094914836.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 417610 418788 . + . ID=gene-CCO57_RS04945;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=CCO57_RS04945;old_locus_tag=CCO57_04940 NZ_NPMC01000002.1 Protein Homology CDS 417610 418788 . + 0 ID=cds-WP_023213650.1;Parent=gene-CCO57_RS04945;Dbxref=GenBank:WP_023213650.1;Name=WP_023213650.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=CCO57_RS04945;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_023213650.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 418813 419055 . + . ID=gene-CCO57_RS04950;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=CCO57_RS04950;old_locus_tag=CCO57_04945 NZ_NPMC01000002.1 Protein Homology CDS 418813 419055 . + 0 ID=cds-WP_001143113.1;Parent=gene-CCO57_RS04950;Dbxref=GenBank:WP_001143113.1;Name=WP_001143113.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=CCO57_RS04950;product=type III secretion system needle filament protein PrgI;protein_id=WP_001143113.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 419074 419379 . + . ID=gene-CCO57_RS04955;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=CCO57_RS04955;old_locus_tag=CCO57_04950 NZ_NPMC01000002.1 Protein Homology CDS 419074 419379 . + 0 ID=cds-WP_000020431.1;Parent=gene-CCO57_RS04955;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=CCO57_RS04955;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 419376 420134 . + . ID=gene-CCO57_RS04960;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=CCO57_RS04960;old_locus_tag=CCO57_04955 NZ_NPMC01000002.1 Protein Homology CDS 419376 420134 . + 0 ID=cds-WP_000621238.1;Parent=gene-CCO57_RS04960;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=CCO57_RS04960;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 420106 420705 . + . ID=gene-CCO57_RS04965;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=CCO57_RS04965;old_locus_tag=CCO57_04960 NZ_NPMC01000002.1 Protein Homology CDS 420106 420705 . + 0 ID=cds-WP_077907125.1;Parent=gene-CCO57_RS04965;Dbxref=GenBank:WP_077907125.1;Name=WP_077907125.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=CCO57_RS04965;product=oxygen-regulated invasion protein OrgA;protein_id=WP_077907125.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 420662 421333 . + . ID=gene-CCO57_RS04970;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=CCO57_RS04970;old_locus_tag=CCO57_04965 NZ_NPMC01000002.1 Protein Homology CDS 420662 421333 . + 0 ID=cds-WP_000916655.1;Parent=gene-CCO57_RS04970;Dbxref=GenBank:WP_000916655.1;Name=WP_000916655.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835247.1;locus_tag=CCO57_RS04970;product=type III secretion system linker protein OrgB;protein_id=WP_000916655.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 421349 421801 . + . ID=gene-CCO57_RS04975;Name=CCO57_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS04975;old_locus_tag=CCO57_04970 NZ_NPMC01000002.1 Protein Homology CDS 421349 421801 . + 0 ID=cds-WP_000612177.1;Parent=gene-CCO57_RS04975;Dbxref=GenBank:WP_000612177.1;Name=WP_000612177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=CCO57_RS04975;product=type III secretion system effector protein OrgC;protein_id=WP_000612177.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 422146 423033 . + . ID=gene-CCO57_RS04980;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=CCO57_RS04980;old_locus_tag=CCO57_04975 NZ_NPMC01000002.1 Protein Homology CDS 422146 423033 . + 0 ID=cds-WP_094914837.1;Parent=gene-CCO57_RS04980;Dbxref=GenBank:WP_094914837.1;Name=WP_094914837.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=CCO57_RS04980;product=invasion transcriptional regulator HilC;protein_id=WP_094914837.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 423417 424172 . + . ID=gene-CCO57_RS04985;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=CCO57_RS04985;old_locus_tag=CCO57_04980 NZ_NPMC01000002.1 Protein Homology CDS 423417 424172 . + 0 ID=cds-WP_001246662.1;Parent=gene-CCO57_RS04985;Dbxref=GenBank:WP_001246662.1;Name=WP_001246662.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=CCO57_RS04985;product=transcriptional regulator SprB;protein_id=WP_001246662.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 424333 425241 . + . ID=gene-CCO57_RS04990;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=CCO57_RS04990;old_locus_tag=CCO57_04985 NZ_NPMC01000002.1 Protein Homology CDS 424333 425241 . + 0 ID=cds-WP_077905364.1;Parent=gene-CCO57_RS04990;Dbxref=GenBank:WP_077905364.1;Name=WP_077905364.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=CCO57_RS04990;product=type III secretion system YopJ family effector AvrA;protein_id=WP_077905364.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 425340 426188 . - . ID=gene-CCO57_RS04995;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=CCO57_RS04995;old_locus_tag=CCO57_04990 NZ_NPMC01000002.1 Protein Homology CDS 425340 426188 . - 0 ID=cds-WP_000480209.1;Parent=gene-CCO57_RS04995;Dbxref=GenBank:WP_000480209.1;Name=WP_000480209.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=CCO57_RS04995;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480209.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 426179 427039 . - . ID=gene-CCO57_RS05000;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=CCO57_RS05000;old_locus_tag=CCO57_04995 NZ_NPMC01000002.1 Protein Homology CDS 426179 427039 . - 0 ID=cds-WP_001104336.1;Parent=gene-CCO57_RS05000;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=CCO57_RS05000;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 427036 427857 . - . ID=gene-CCO57_RS05005;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=CCO57_RS05005;old_locus_tag=CCO57_05000 NZ_NPMC01000002.1 Protein Homology CDS 427036 427857 . - 0 ID=cds-WP_000083153.1;Parent=gene-CCO57_RS05005;Dbxref=GenBank:WP_000083153.1;Name=WP_000083153.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=CCO57_RS05005;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000083153.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 427854 428771 . - . ID=gene-CCO57_RS05010;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=CCO57_RS05010;old_locus_tag=CCO57_05005 NZ_NPMC01000002.1 Protein Homology CDS 427854 428771 . - 0 ID=cds-WP_000182930.1;Parent=gene-CCO57_RS05010;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=CCO57_RS05010;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 428953 429297 . + . ID=gene-CCO57_RS05015;Name=CCO57_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05015;old_locus_tag=CCO57_05010 NZ_NPMC01000002.1 Protein Homology CDS 428953 429297 . + 0 ID=cds-WP_001667031.1;Parent=gene-CCO57_RS05015;Dbxref=GenBank:WP_001667031.1;Name=WP_001667031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=CCO57_RS05015;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001667031.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 429359 431437 . - . ID=gene-CCO57_RS05020;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO57_RS05020;old_locus_tag=CCO57_05015 NZ_NPMC01000002.1 Protein Homology CDS 429359 431437 . - 0 ID=cds-WP_094914838.1;Parent=gene-CCO57_RS05020;Dbxref=GenBank:WP_094914838.1;Name=WP_094914838.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=CCO57_RS05020;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_094914838.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 431656 432666 . - . ID=gene-CCO57_RS05025;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=CCO57_RS05025;old_locus_tag=CCO57_05020 NZ_NPMC01000002.1 Protein Homology CDS 431656 432666 . - 0 ID=cds-WP_094914839.1;Parent=gene-CCO57_RS05025;Dbxref=GenBank:WP_094914839.1;Name=WP_094914839.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=CCO57_RS05025;product=hydrogenase expression/formation protein HypE;protein_id=WP_094914839.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 432663 433784 . - . ID=gene-CCO57_RS05030;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=CCO57_RS05030;old_locus_tag=CCO57_05025 NZ_NPMC01000002.1 Protein Homology CDS 432663 433784 . - 0 ID=cds-WP_001212962.1;Parent=gene-CCO57_RS05030;Dbxref=GenBank:WP_001212962.1;Name=WP_001212962.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=CCO57_RS05030;product=hydrogenase formation protein HypD;protein_id=WP_001212962.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 433784 434056 . - . ID=gene-CCO57_RS05035;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO57_RS05035;old_locus_tag=CCO57_05030 NZ_NPMC01000002.1 Protein Homology CDS 433784 434056 . - 0 ID=cds-WP_000334871.1;Parent=gene-CCO57_RS05035;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=CCO57_RS05035;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 434047 434919 . - . ID=gene-CCO57_RS05040;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=CCO57_RS05040;old_locus_tag=CCO57_05035 NZ_NPMC01000002.1 Protein Homology CDS 434047 434919 . - 0 ID=cds-WP_000337632.1;Parent=gene-CCO57_RS05040;Dbxref=GenBank:WP_000337632.1;Name=WP_000337632.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=CCO57_RS05040;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337632.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 434988 435344 . - . ID=gene-CCO57_RS05045;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO57_RS05045;old_locus_tag=CCO57_05040 NZ_NPMC01000002.1 Protein Homology CDS 434988 435344 . - 0 ID=cds-WP_000544461.1;Parent=gene-CCO57_RS05045;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=CCO57_RS05045;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 435554 436015 . + . ID=gene-CCO57_RS05055;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=CCO57_RS05055;old_locus_tag=CCO57_05050 NZ_NPMC01000002.1 Protein Homology CDS 435554 436015 . + 0 ID=cds-WP_000158074.1;Parent=gene-CCO57_RS05055;Dbxref=GenBank:WP_000158074.1;Name=WP_000158074.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=CCO57_RS05055;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158074.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 436161 436769 . + . ID=gene-CCO57_RS05060;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=CCO57_RS05060;old_locus_tag=CCO57_05055 NZ_NPMC01000002.1 Protein Homology CDS 436161 436769 . + 0 ID=cds-WP_001079164.1;Parent=gene-CCO57_RS05060;Dbxref=GenBank:WP_001079164.1;Name=WP_001079164.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=CCO57_RS05060;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079164.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 436769 438595 . + . ID=gene-CCO57_RS05065;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=CCO57_RS05065;old_locus_tag=CCO57_05060 NZ_NPMC01000002.1 Protein Homology CDS 436769 438595 . + 0 ID=cds-WP_000097040.1;Parent=gene-CCO57_RS05065;Dbxref=GenBank:WP_000097040.1;Name=WP_000097040.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=CCO57_RS05065;product=formate hydrogenlyase subunit 3;protein_id=WP_000097040.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 438598 439521 . + . ID=gene-CCO57_RS05070;Name=CCO57_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05070;old_locus_tag=CCO57_05065 NZ_NPMC01000002.1 Protein Homology CDS 438598 439521 . + 0 ID=cds-WP_094914840.1;Parent=gene-CCO57_RS05070;Dbxref=GenBank:WP_094914840.1;Name=WP_094914840.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=CCO57_RS05070;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_094914840.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 439539 441248 . + . ID=gene-CCO57_RS05075;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=CCO57_RS05075;old_locus_tag=CCO57_05070 NZ_NPMC01000002.1 Protein Homology CDS 439539 441248 . + 0 ID=cds-WP_001288155.1;Parent=gene-CCO57_RS05075;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=CCO57_RS05075;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 441258 441800 . + . ID=gene-CCO57_RS05080;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=CCO57_RS05080;old_locus_tag=CCO57_05075 NZ_NPMC01000002.1 Protein Homology CDS 441258 441800 . + 0 ID=cds-WP_000493773.1;Parent=gene-CCO57_RS05080;Dbxref=GenBank:WP_000493773.1;Name=WP_000493773.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=CCO57_RS05080;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493773.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 441800 442567 . + . ID=gene-CCO57_RS05085;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=CCO57_RS05085;old_locus_tag=CCO57_05080 NZ_NPMC01000002.1 Protein Homology CDS 441800 442567 . + 0 ID=cds-WP_000067419.1;Parent=gene-CCO57_RS05085;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=CCO57_RS05085;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 442564 442974 . + . ID=gene-CCO57_RS05090;Name=CCO57_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05090;old_locus_tag=CCO57_05085 NZ_NPMC01000002.1 Protein Homology CDS 442564 442974 . + 0 ID=cds-WP_000003725.1;Parent=gene-CCO57_RS05090;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=CCO57_RS05090;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 442967 443437 . + . ID=gene-CCO57_RS05095;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=CCO57_RS05095;old_locus_tag=CCO57_05090 NZ_NPMC01000002.1 Protein Homology CDS 442967 443437 . + 0 ID=cds-WP_000132984.1;Parent=gene-CCO57_RS05095;Dbxref=GenBank:WP_000132984.1;Name=WP_000132984.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=CCO57_RS05095;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132984.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 443464 444273 . + . ID=gene-CCO57_RS05100;Name=CCO57_RS05100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS05100;old_locus_tag=CCO57_05095;pseudo=true NZ_NPMC01000002.1 Protein Homology CDS 443464 444273 . + 0 ID=cds-CCO57_RS05100;Parent=gene-CCO57_RS05100;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=CCO57_RS05100;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 444474 445019 . + . ID=gene-CCO57_RS05105;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=CCO57_RS05105;old_locus_tag=CCO57_05100 NZ_NPMC01000002.1 Protein Homology CDS 444474 445019 . + 0 ID=cds-WP_001078787.1;Parent=gene-CCO57_RS05105;Dbxref=GenBank:WP_001078787.1;Name=WP_001078787.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=CCO57_RS05105;product=electron transport protein HydN;protein_id=WP_001078787.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 445165 447405 . + . ID=gene-CCO57_RS05110;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=CCO57_RS05110;old_locus_tag=CCO57_05105 NZ_NPMC01000002.1 Protein Homology CDS 445165 447405 . + 0 ID=cds-WP_079845982.1;Parent=gene-CCO57_RS05110;Dbxref=GenBank:WP_079845982.1;Name=WP_079845982.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=CCO57_RS05110;product=carbamoyltransferase HypF;protein_id=WP_079845982.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 447502 448635 . - . ID=gene-CCO57_RS05115;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=CCO57_RS05115;old_locus_tag=CCO57_05110 NZ_NPMC01000002.1 Protein Homology CDS 447502 448635 . - 0 ID=cds-WP_023212168.1;Parent=gene-CCO57_RS05115;Dbxref=GenBank:WP_023212168.1;Name=WP_023212168.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=CCO57_RS05115;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_023212168.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 448632 450071 . - . ID=gene-CCO57_RS05120;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=CCO57_RS05120;old_locus_tag=CCO57_05115 NZ_NPMC01000002.1 Protein Homology CDS 448632 450071 . - 0 ID=cds-WP_023212167.1;Parent=gene-CCO57_RS05120;Dbxref=GenBank:WP_023212167.1;Name=WP_023212167.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=CCO57_RS05120;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_023212167.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 450257 451777 . + . ID=gene-CCO57_RS05125;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=CCO57_RS05125;old_locus_tag=CCO57_05120 NZ_NPMC01000002.1 Protein Homology CDS 450257 451777 . + 0 ID=cds-WP_000010808.1;Parent=gene-CCO57_RS05125;Dbxref=GenBank:WP_000010808.1;Name=WP_000010808.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=CCO57_RS05125;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010808.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 451774 452739 . - . ID=gene-CCO57_RS05130;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=CCO57_RS05130;old_locus_tag=CCO57_05125 NZ_NPMC01000002.1 Protein Homology CDS 451774 452739 . - 0 ID=cds-WP_001278204.1;Parent=gene-CCO57_RS05130;Dbxref=GenBank:WP_001278204.1;Name=WP_001278204.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=CCO57_RS05130;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278204.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 452732 453505 . - . ID=gene-CCO57_RS05135;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=CCO57_RS05135;old_locus_tag=CCO57_05130 NZ_NPMC01000002.1 Protein Homology CDS 452732 453505 . - 0 ID=cds-WP_000804536.1;Parent=gene-CCO57_RS05135;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=CCO57_RS05135;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 453703 454062 . - . ID=gene-CCO57_RS05140;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=CCO57_RS05140;old_locus_tag=CCO57_05135 NZ_NPMC01000002.1 Protein Homology CDS 453703 454062 . - 0 ID=cds-WP_000255198.1;Parent=gene-CCO57_RS05140;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=CCO57_RS05140;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 454139 454918 . - . ID=gene-CCO57_RS05145;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=CCO57_RS05145;old_locus_tag=CCO57_05140 NZ_NPMC01000002.1 Protein Homology CDS 454139 454918 . - 0 ID=cds-WP_001077372.1;Parent=gene-CCO57_RS05145;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=CCO57_RS05145;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 454930 455292 . - . ID=gene-CCO57_RS05150;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=CCO57_RS05150;old_locus_tag=CCO57_05145 NZ_NPMC01000002.1 Protein Homology CDS 454930 455292 . - 0 ID=cds-WP_000111553.1;Parent=gene-CCO57_RS05150;Dbxref=GenBank:WP_000111553.1;Name=WP_000111553.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=CCO57_RS05150;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111553.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 455304 456275 . - . ID=gene-CCO57_RS05155;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=CCO57_RS05155;old_locus_tag=CCO57_05150 NZ_NPMC01000002.1 Protein Homology CDS 455304 456275 . - 0 ID=cds-WP_023217568.1;Parent=gene-CCO57_RS05155;Dbxref=GenBank:WP_023217568.1;Name=WP_023217568.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=CCO57_RS05155;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_023217568.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 456272 456835 . - . ID=gene-CCO57_RS05160;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=CCO57_RS05160;old_locus_tag=CCO57_05155 NZ_NPMC01000002.1 Protein Homology CDS 456272 456835 . - 0 ID=cds-WP_000573333.1;Parent=gene-CCO57_RS05160;Dbxref=GenBank:WP_000573333.1;Name=WP_000573333.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=CCO57_RS05160;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573333.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 457089 458168 . + . ID=gene-CCO57_RS05165;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=CCO57_RS05165;old_locus_tag=CCO57_05160 NZ_NPMC01000002.1 Protein Homology CDS 457089 458168 . + 0 ID=cds-WP_000476811.1;Parent=gene-CCO57_RS05165;Dbxref=GenBank:WP_000476811.1;Name=WP_000476811.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=CCO57_RS05165;product=lytic murein transglycosylase B;protein_id=WP_000476811.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 458206 458451 . - . ID=gene-CCO57_RS24535;Name=CCO57_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24535;old_locus_tag=CCO57_05165 NZ_NPMC01000002.1 Protein Homology CDS 458206 458451 . - 0 ID=cds-WP_001519391.1;Parent=gene-CCO57_RS24535;Dbxref=GenBank:WP_001519391.1;Name=WP_001519391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=CCO57_RS24535;product=hypothetical protein;protein_id=WP_001519391.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 458646 459143 . + . ID=gene-CCO57_RS05175;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=CCO57_RS05175;old_locus_tag=CCO57_05170 NZ_NPMC01000002.1 Protein Homology CDS 458646 459143 . + 0 ID=cds-WP_000132239.1;Parent=gene-CCO57_RS05175;Dbxref=GenBank:WP_000132239.1;Name=WP_000132239.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=CCO57_RS05175;product=nicotinamide-nucleotide amidase;protein_id=WP_000132239.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 459228 460289 . + . ID=gene-CCO57_RS05180;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CCO57_RS05180;old_locus_tag=CCO57_05175 NZ_NPMC01000002.1 Protein Homology CDS 459228 460289 . + 0 ID=cds-WP_000963150.1;Parent=gene-CCO57_RS05180;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=CCO57_RS05180;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 460406 460906 . + . ID=gene-CCO57_RS05185;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CCO57_RS05185;old_locus_tag=CCO57_05180 NZ_NPMC01000002.1 Protein Homology CDS 460406 460906 . + 0 ID=cds-WP_001294867.1;Parent=gene-CCO57_RS05185;Dbxref=GenBank:WP_001294867.1;Name=WP_001294867.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=CCO57_RS05185;product=recombination regulator RecX;protein_id=WP_001294867.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 461142 463772 . + . ID=gene-CCO57_RS05195;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CCO57_RS05195;old_locus_tag=CCO57_05190 NZ_NPMC01000002.1 Protein Homology CDS 461142 463772 . + 0 ID=cds-WP_000047220.1;Parent=gene-CCO57_RS05195;Dbxref=GenBank:WP_000047220.1;Name=WP_000047220.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=CCO57_RS05195;product=alanine--tRNA ligase;protein_id=WP_000047220.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 464007 464192 . + . ID=gene-CCO57_RS05200;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=CCO57_RS05200;old_locus_tag=CCO57_05195 NZ_NPMC01000002.1 Protein Homology CDS 464007 464192 . + 0 ID=cds-WP_000906486.1;Parent=gene-CCO57_RS05200;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=CCO57_RS05200;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 464496 464588 . + . ID=gene-CCO57_RS05210;Name=CCO57_RS05210;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS05210;old_locus_tag=CCO57_05205 NZ_NPMC01000002.1 tRNAscan-SE tRNA 464496 464588 . + . ID=rna-CCO57_RS05210;Parent=gene-CCO57_RS05210;anticodon=(pos:464530..464532);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS05210;product=tRNA-Ser NZ_NPMC01000002.1 tRNAscan-SE exon 464496 464588 . + . ID=exon-CCO57_RS05210-1;Parent=rna-CCO57_RS05210;anticodon=(pos:464530..464532);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS05210;product=tRNA-Ser NZ_NPMC01000002.1 RefSeq gene 464592 464668 . + . ID=gene-CCO57_RS05215;Name=CCO57_RS05215;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS05215;old_locus_tag=CCO57_05210 NZ_NPMC01000002.1 tRNAscan-SE tRNA 464592 464668 . + . ID=rna-CCO57_RS05215;Parent=gene-CCO57_RS05215;anticodon=(pos:464626..464628);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS05215;product=tRNA-Arg NZ_NPMC01000002.1 tRNAscan-SE exon 464592 464668 . + . ID=exon-CCO57_RS05215-1;Parent=rna-CCO57_RS05215;anticodon=(pos:464626..464628);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS05215;product=tRNA-Arg NZ_NPMC01000002.1 RefSeq gene 464730 464806 . + . ID=gene-CCO57_RS05220;Name=CCO57_RS05220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS05220;old_locus_tag=CCO57_05215 NZ_NPMC01000002.1 tRNAscan-SE tRNA 464730 464806 . + . ID=rna-CCO57_RS05220;Parent=gene-CCO57_RS05220;anticodon=(pos:464764..464766);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS05220;product=tRNA-Arg NZ_NPMC01000002.1 tRNAscan-SE exon 464730 464806 . + . ID=exon-CCO57_RS05220-1;Parent=rna-CCO57_RS05220;anticodon=(pos:464764..464766);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS05220;product=tRNA-Arg NZ_NPMC01000002.1 RefSeq gene 465000 465076 . + . ID=gene-CCO57_RS05225;Name=CCO57_RS05225;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS05225;old_locus_tag=CCO57_05220 NZ_NPMC01000002.1 tRNAscan-SE tRNA 465000 465076 . + . ID=rna-CCO57_RS05225;Parent=gene-CCO57_RS05225;anticodon=(pos:465034..465036);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS05225;product=tRNA-Arg NZ_NPMC01000002.1 tRNAscan-SE exon 465000 465076 . + . ID=exon-CCO57_RS05225-1;Parent=rna-CCO57_RS05225;anticodon=(pos:465034..465036);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS05225;product=tRNA-Arg NZ_NPMC01000002.1 RefSeq gene 465313 465879 . + . ID=gene-CCO57_RS05230;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=CCO57_RS05230;old_locus_tag=CCO57_05225 NZ_NPMC01000002.1 Protein Homology CDS 465313 465879 . + 0 ID=cds-WP_000271296.1;Parent=gene-CCO57_RS05230;Dbxref=GenBank:WP_000271296.1;Name=WP_000271296.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=CCO57_RS05230;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271296.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 465876 466301 . + . ID=gene-CCO57_RS05235;Name=CCO57_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05235;old_locus_tag=CCO57_05230 NZ_NPMC01000002.1 Protein Homology CDS 465876 466301 . + 0 ID=cds-WP_001279499.1;Parent=gene-CCO57_RS05235;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=CCO57_RS05235;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 466378 467934 . + . ID=gene-CCO57_RS05240;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=CCO57_RS05240;old_locus_tag=CCO57_05235 NZ_NPMC01000002.1 Protein Homology CDS 466378 467934 . + 0 ID=cds-WP_000611821.1;Parent=gene-CCO57_RS05240;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=CCO57_RS05240;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 468084 468599 . + . ID=gene-CCO57_RS05245;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=CCO57_RS05245;old_locus_tag=CCO57_05240 NZ_NPMC01000002.1 Protein Homology CDS 468084 468599 . + 0 ID=cds-WP_001130194.1;Parent=gene-CCO57_RS05245;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=CCO57_RS05245;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 468945 470315 . + . ID=gene-CCO57_RS05250;Name=CCO57_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05250;old_locus_tag=CCO57_05245 NZ_NPMC01000002.1 Protein Homology CDS 468945 470315 . + 0 ID=cds-WP_000645140.1;Parent=gene-CCO57_RS05250;Dbxref=GenBank:WP_000645140.1;Name=WP_000645140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=CCO57_RS05250;product=carbohydrate porin;protein_id=WP_000645140.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 470364 471902 . - . ID=gene-CCO57_RS05255;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=CCO57_RS05255;old_locus_tag=CCO57_05250 NZ_NPMC01000002.1 Protein Homology CDS 470364 471902 . - 0 ID=cds-WP_001187297.1;Parent=gene-CCO57_RS05255;Dbxref=GenBank:WP_001187297.1;Name=WP_001187297.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=CCO57_RS05255;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187297.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 471919 473091 . - . ID=gene-CCO57_RS05260;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=CCO57_RS05260;old_locus_tag=CCO57_05255 NZ_NPMC01000002.1 Protein Homology CDS 471919 473091 . - 0 ID=cds-WP_094914841.1;Parent=gene-CCO57_RS05260;Dbxref=GenBank:WP_094914841.1;Name=WP_094914841.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=CCO57_RS05260;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_094914841.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 473218 473748 . - . ID=gene-CCO57_RS05265;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=CCO57_RS05265;old_locus_tag=CCO57_05260 NZ_NPMC01000002.1 Protein Homology CDS 473218 473748 . - 0 ID=cds-WP_000378431.1;Parent=gene-CCO57_RS05265;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=CCO57_RS05265;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 474245 475429 . - . ID=gene-CCO57_RS05270;Name=CCO57_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05270;old_locus_tag=CCO57_05265 NZ_NPMC01000002.1 Protein Homology CDS 474245 475429 . - 0 ID=cds-WP_060633312.1;Parent=gene-CCO57_RS05270;Dbxref=GenBank:WP_060633312.1;Name=WP_060633312.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=CCO57_RS05270;product=MFS transporter;protein_id=WP_060633312.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 475594 476589 . - . ID=gene-CCO57_RS05275;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=CCO57_RS05275;old_locus_tag=CCO57_05270 NZ_NPMC01000002.1 Protein Homology CDS 475594 476589 . - 0 ID=cds-WP_001216613.1;Parent=gene-CCO57_RS05275;Dbxref=GenBank:WP_001216613.1;Name=WP_001216613.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=CCO57_RS05275;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216613.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 476659 477723 . - . ID=gene-CCO57_RS05280;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=CCO57_RS05280;old_locus_tag=CCO57_05275 NZ_NPMC01000002.1 Protein Homology CDS 476659 477723 . - 0 ID=cds-WP_094914842.1;Parent=gene-CCO57_RS05280;Dbxref=GenBank:WP_094914842.1;Name=WP_094914842.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=CCO57_RS05280;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_094914842.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 477716 478918 . - . ID=gene-CCO57_RS05285;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=CCO57_RS05285;old_locus_tag=CCO57_05280 NZ_NPMC01000002.1 Protein Homology CDS 477716 478918 . - 0 ID=cds-WP_000985529.1;Parent=gene-CCO57_RS05285;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=CCO57_RS05285;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 479273 480232 . - . ID=gene-CCO57_RS05295;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CCO57_RS05295;old_locus_tag=CCO57_05290 NZ_NPMC01000002.1 Protein Homology CDS 479273 480232 . - 0 ID=cds-WP_000777901.1;Parent=gene-CCO57_RS05295;Dbxref=GenBank:WP_000777901.1;Name=WP_000777901.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=CCO57_RS05295;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777901.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 480243 482360 . - . ID=gene-CCO57_RS05300;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CCO57_RS05300;old_locus_tag=CCO57_05295 NZ_NPMC01000002.1 Protein Homology CDS 480243 482360 . - 0 ID=cds-WP_374703933.1;Parent=gene-CCO57_RS05300;Dbxref=GenBank:WP_374703933.1;Name=WP_374703933.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526351.1;locus_tag=CCO57_RS05300;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_374703933.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 482360 482770 . - . ID=gene-CCO57_RS05305;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CCO57_RS05305;old_locus_tag=CCO57_05300 NZ_NPMC01000002.1 Protein Homology CDS 482360 482770 . - 0 ID=cds-WP_001275402.1;Parent=gene-CCO57_RS05305;Dbxref=GenBank:WP_001275402.1;Name=WP_001275402.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=CCO57_RS05305;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275402.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 482767 483012 . - . ID=gene-CCO57_RS05310;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=CCO57_RS05310;old_locus_tag=CCO57_05305 NZ_NPMC01000002.1 Protein Homology CDS 482767 483012 . - 0 ID=cds-WP_000028870.1;Parent=gene-CCO57_RS05310;Dbxref=GenBank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=CCO57_RS05310;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 483284 483715 . - . ID=gene-CCO57_RS05320;Name=CCO57_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05320;old_locus_tag=CCO57_05315 NZ_NPMC01000002.1 Protein Homology CDS 483284 483715 . - 0 ID=cds-WP_000209807.1;Parent=gene-CCO57_RS05320;Dbxref=GenBank:WP_000209807.1;Name=WP_000209807.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=CCO57_RS05320;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209807.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 483804 485138 . + . ID=gene-CCO57_RS05325;Name=CCO57_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05325;old_locus_tag=CCO57_05320 NZ_NPMC01000002.1 Protein Homology CDS 483804 485138 . + 0 ID=cds-WP_094914843.1;Parent=gene-CCO57_RS05325;Dbxref=GenBank:WP_094914843.1;Name=WP_094914843.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=CCO57_RS05325;product=PLP-dependent aminotransferase family protein;protein_id=WP_094914843.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 485222 485548 . - . ID=gene-CCO57_RS05330;Name=CCO57_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05330;old_locus_tag=CCO57_05325 NZ_NPMC01000002.1 Protein Homology CDS 485222 485548 . - 0 ID=cds-WP_001519557.1;Parent=gene-CCO57_RS05330;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=CCO57_RS05330;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 485710 486060 . + . ID=gene-CCO57_RS05335;Name=CCO57_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05335;old_locus_tag=CCO57_05330 NZ_NPMC01000002.1 Protein Homology CDS 485710 486060 . + 0 ID=cds-WP_000281304.1;Parent=gene-CCO57_RS05335;Dbxref=GenBank:WP_000281304.1;Name=WP_000281304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=CCO57_RS05335;product=DUF2002 family protein;protein_id=WP_000281304.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 486095 486544 . - . ID=gene-CCO57_RS05340;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=CCO57_RS05340;old_locus_tag=CCO57_05335 NZ_NPMC01000002.1 Protein Homology CDS 486095 486544 . - 0 ID=cds-WP_000492669.1;Parent=gene-CCO57_RS05340;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=CCO57_RS05340;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 487444 487845 . + . ID=gene-CCO57_RS05360;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=CCO57_RS05360;old_locus_tag=CCO57_05355 NZ_NPMC01000002.1 Protein Homology CDS 487444 487845 . + 0 ID=cds-WP_001051100.1;Parent=gene-CCO57_RS05360;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=CCO57_RS05360;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 487935 488114 . - . ID=gene-CCO57_RS05365;Name=CCO57_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05365;old_locus_tag=CCO57_05360 NZ_NPMC01000002.1 Protein Homology CDS 487935 488114 . - 0 ID=cds-WP_000494935.1;Parent=gene-CCO57_RS05365;Dbxref=GenBank:WP_000494935.1;Name=WP_000494935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=CCO57_RS05365;product=hypothetical protein;protein_id=WP_000494935.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 488193 488720 . - . ID=gene-CCO57_RS05370;Name=CCO57_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05370;old_locus_tag=CCO57_05365 NZ_NPMC01000002.1 Protein Homology CDS 488193 488720 . - 0 ID=cds-WP_000022011.1;Parent=gene-CCO57_RS05370;Dbxref=GenBank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=CCO57_RS05370;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 488730 489029 . - . ID=gene-CCO57_RS05375;Name=CCO57_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05375;old_locus_tag=CCO57_05370 NZ_NPMC01000002.1 Protein Homology CDS 488730 489029 . - 0 ID=cds-WP_000137433.1;Parent=gene-CCO57_RS05375;Dbxref=GenBank:WP_000137433.1;Name=WP_000137433.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=CCO57_RS05375;product=ArsR/SmtB family transcription factor;protein_id=WP_000137433.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 489212 489370 . + . ID=gene-CCO57_RS05380;Name=CCO57_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05380;old_locus_tag=CCO57_05375 NZ_NPMC01000002.1 Protein Homology CDS 489212 489370 . + 0 ID=cds-WP_000508175.1;Parent=gene-CCO57_RS05380;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=CCO57_RS05380;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 489470 489919 . + . ID=gene-CCO57_RS05390;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=CCO57_RS05390;old_locus_tag=CCO57_05380 NZ_NPMC01000002.1 Protein Homology CDS 489470 489919 . + 0 ID=cds-WP_000522406.1;Parent=gene-CCO57_RS05390;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=CCO57_RS05390;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 489941 490618 . - . ID=gene-CCO57_RS05395;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=CCO57_RS05395;old_locus_tag=CCO57_05385 NZ_NPMC01000002.1 Protein Homology CDS 489941 490618 . - 0 ID=cds-WP_000126152.1;Parent=gene-CCO57_RS05395;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=CCO57_RS05395;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 490660 492060 . - . ID=gene-CCO57_RS05400;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=CCO57_RS05400;old_locus_tag=CCO57_05390 NZ_NPMC01000002.1 Protein Homology CDS 490660 492060 . - 0 ID=cds-WP_000531288.1;Parent=gene-CCO57_RS05400;Dbxref=GenBank:WP_000531288.1;Name=WP_000531288.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=CCO57_RS05400;product=GABA permease;protein_id=WP_000531288.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 492194 493477 . - . ID=gene-CCO57_RS05405;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=CCO57_RS05405;old_locus_tag=CCO57_05395 NZ_NPMC01000002.1 Protein Homology CDS 492194 493477 . - 0 ID=cds-WP_094914844.1;Parent=gene-CCO57_RS05405;Dbxref=GenBank:WP_094914844.1;Name=WP_094914844.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=CCO57_RS05405;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_094914844.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 493492 494940 . - . ID=gene-CCO57_RS05410;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=CCO57_RS05410;old_locus_tag=CCO57_05400 NZ_NPMC01000002.1 Protein Homology CDS 493492 494940 . - 0 ID=cds-WP_001176518.1;Parent=gene-CCO57_RS05410;Dbxref=GenBank:WP_001176518.1;Name=WP_001176518.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=CCO57_RS05410;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_001176518.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 494962 496230 . - . ID=gene-CCO57_RS05415;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=CCO57_RS05415;old_locus_tag=CCO57_05405 NZ_NPMC01000002.1 Protein Homology CDS 494962 496230 . - 0 ID=cds-WP_000271905.1;Parent=gene-CCO57_RS05415;Dbxref=GenBank:WP_000271905.1;Name=WP_000271905.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=CCO57_RS05415;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271905.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 496256 497233 . - . ID=gene-CCO57_RS05420;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=CCO57_RS05420;old_locus_tag=CCO57_05410 NZ_NPMC01000002.1 Protein Homology CDS 496256 497233 . - 0 ID=cds-WP_000993100.1;Parent=gene-CCO57_RS05420;Dbxref=GenBank:WP_000993100.1;Name=WP_000993100.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=CCO57_RS05420;product=glutarate dioxygenase GlaH;protein_id=WP_000993100.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 497535 499049 . - . ID=gene-CCO57_RS05425;Name=CCO57_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05425;old_locus_tag=CCO57_05415 NZ_NPMC01000002.1 Protein Homology CDS 497535 499049 . - 0 ID=cds-WP_000382034.1;Parent=gene-CCO57_RS05425;Dbxref=GenBank:WP_000382034.1;Name=WP_000382034.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=CCO57_RS05425;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382034.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 499060 499494 . - . ID=gene-CCO57_RS05430;Name=CCO57_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05430;old_locus_tag=CCO57_05420 NZ_NPMC01000002.1 Protein Homology CDS 499060 499494 . - 0 ID=cds-WP_077905333.1;Parent=gene-CCO57_RS05430;Dbxref=GenBank:WP_077905333.1;Name=WP_077905333.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=CCO57_RS05430;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_077905333.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 499506 500483 . - . ID=gene-CCO57_RS05435;Name=CCO57_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05435;old_locus_tag=CCO57_05425 NZ_NPMC01000002.1 Protein Homology CDS 499506 500483 . - 0 ID=cds-WP_000744413.1;Parent=gene-CCO57_RS05435;Dbxref=GenBank:WP_000744413.1;Name=WP_000744413.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=CCO57_RS05435;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744413.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 500638 501312 . + . ID=gene-CCO57_RS05440;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=CCO57_RS05440;old_locus_tag=CCO57_05430 NZ_NPMC01000002.1 Protein Homology CDS 500638 501312 . + 0 ID=cds-WP_001237934.1;Parent=gene-CCO57_RS05440;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=CCO57_RS05440;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 501299 502714 . + . ID=gene-CCO57_RS05445;Name=CCO57_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05445;old_locus_tag=CCO57_05435 NZ_NPMC01000002.1 Protein Homology CDS 501299 502714 . + 0 ID=cds-WP_000872338.1;Parent=gene-CCO57_RS05445;Dbxref=GenBank:WP_000872338.1;Name=WP_000872338.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=CCO57_RS05445;product=sensor histidine kinase;protein_id=WP_000872338.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 502847 503860 . + . ID=gene-CCO57_RS05450;Name=CCO57_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05450;old_locus_tag=CCO57_05440 NZ_NPMC01000002.1 Protein Homology CDS 502847 503860 . + 0 ID=cds-WP_001059351.1;Parent=gene-CCO57_RS05450;Dbxref=GenBank:WP_001059351.1;Name=WP_001059351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=CCO57_RS05450;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_001059351.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 504582 505478 . - . ID=gene-CCO57_RS05455;Name=CCO57_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05455;old_locus_tag=CCO57_05445 NZ_NPMC01000002.1 Protein Homology CDS 504582 505478 . - 0 ID=cds-WP_000701508.1;Parent=gene-CCO57_RS05455;Dbxref=GenBank:WP_000701508.1;Name=WP_000701508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=CCO57_RS05455;product=antimicrobial resistance protein Mig-14;protein_id=WP_000701508.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 505772 506701 . - . ID=gene-CCO57_RS05465;Name=CCO57_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05465;old_locus_tag=CCO57_05455 NZ_NPMC01000002.1 Protein Homology CDS 505772 506701 . - 0 ID=cds-WP_094914845.1;Parent=gene-CCO57_RS05465;Dbxref=GenBank:WP_094914845.1;Name=WP_094914845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=CCO57_RS05465;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_094914845.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 507218 508270 . + . ID=gene-CCO57_RS05470;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=CCO57_RS05470;old_locus_tag=CCO57_05460 NZ_NPMC01000002.1 Protein Homology CDS 507218 508270 . + 0 ID=cds-WP_094914846.1;Parent=gene-CCO57_RS05470;Dbxref=GenBank:WP_094914846.1;Name=WP_094914846.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=CCO57_RS05470;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_094914846.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 508445 508783 . + . ID=gene-CCO57_RS24840;Name=CCO57_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24840;old_locus_tag=CCO57_05465 NZ_NPMC01000002.1 Protein Homology CDS 508445 508783 . + 0 ID=cds-WP_023213081.1;Parent=gene-CCO57_RS24840;Dbxref=GenBank:WP_023213081.1;Name=WP_023213081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233152.1;locus_tag=CCO57_RS24840;product=hypothetical protein;protein_id=WP_023213081.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 509314 511488 . + . ID=gene-CCO57_RS05480;Name=CCO57_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05480;old_locus_tag=CCO57_05470 NZ_NPMC01000002.1 Protein Homology CDS 509314 511488 . + 0 ID=cds-WP_063916899.1;Parent=gene-CCO57_RS05480;Dbxref=GenBank:WP_063916899.1;Name=WP_063916899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=CCO57_RS05480;product=TonB-dependent siderophore receptor;protein_id=WP_063916899.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 511530 512465 . - . ID=gene-CCO57_RS05485;Name=CCO57_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05485;old_locus_tag=CCO57_05475 NZ_NPMC01000002.1 Protein Homology CDS 511530 512465 . - 0 ID=cds-WP_076166475.1;Parent=gene-CCO57_RS05485;Dbxref=GenBank:WP_076166475.1;Name=WP_076166475.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=CCO57_RS05485;product=alpha/beta hydrolase;protein_id=WP_076166475.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 512497 513741 . - . ID=gene-CCO57_RS05490;Name=CCO57_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05490;old_locus_tag=CCO57_05480 NZ_NPMC01000002.1 Protein Homology CDS 512497 513741 . - 0 ID=cds-WP_001528721.1;Parent=gene-CCO57_RS05490;Dbxref=GenBank:WP_001528721.1;Name=WP_001528721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=CCO57_RS05490;product=esterase family protein;protein_id=WP_001528721.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 513851 517507 . - . ID=gene-CCO57_RS05495;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=CCO57_RS05495;old_locus_tag=CCO57_05485 NZ_NPMC01000002.1 Protein Homology CDS 513851 517507 . - 0 ID=cds-WP_094914847.1;Parent=gene-CCO57_RS05495;Dbxref=GenBank:WP_094914847.1;Name=WP_094914847.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=CCO57_RS05495;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_094914847.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 517588 518703 . - . ID=gene-CCO57_RS05500;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=CCO57_RS05500;old_locus_tag=CCO57_05490 NZ_NPMC01000002.1 Protein Homology CDS 517588 518703 . - 0 ID=cds-WP_079846309.1;Parent=gene-CCO57_RS05500;Dbxref=GenBank:WP_079846309.1;Name=WP_079846309.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528704.1;locus_tag=CCO57_RS05500;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_079846309.1;transl_table=11 NZ_NPMC01000002.1 RefSeq gene 519666 520238 . - . ID=gene-CCO57_RS05510;Name=hin;gbkey=Gene;gene=hin;gene_biotype=protein_coding;locus_tag=CCO57_RS05510;old_locus_tag=CCO57_05500 NZ_NPMC01000002.1 Protein Homology CDS 519666 520238 . - 0 ID=cds-WP_000190917.1;Parent=gene-CCO57_RS05510;Dbxref=GenBank:WP_000190917.1;Name=WP_000190917.1;gbkey=CDS;gene=hin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461699.1;locus_tag=CCO57_RS05510;product=flagellar phase variation DNA invertase Hin;protein_id=WP_000190917.1;transl_table=11 NZ_NPMC01000002.1 RefSeq pseudogene 520330 520558 . + . ID=gene-CCO57_RS05515;Name=CCO57_RS05515;end_range=520558,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS05515;old_locus_tag=CCO57_05505;partial=true;pseudo=true NZ_NPMC01000002.1 Protein Homology CDS 520330 520558 . + 0 ID=cds-CCO57_RS05515;Parent=gene-CCO57_RS05515;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=520558,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=CCO57_RS05515;partial=true;product=flagellin FliC;pseudo=true;transl_table=11 ##sequence-region NZ_NPMC01000020.1 1 54353 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000020.1 RefSeq region 1 54353 . + . ID=NZ_NPMC01000020.1:1..54353;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000020.1 RefSeq pseudogene 363 565 . - . ID=gene-CCO57_RS24725;Name=CCO57_RS24725;end_range=565,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24725;partial=true;pseudo=true;start_range=.,363 NZ_NPMC01000020.1 Protein Homology CDS 363 565 . - 0 ID=cds-CCO57_RS24725;Parent=gene-CCO57_RS24725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=565,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=CCO57_RS24725;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,363;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 556 681 . + . ID=gene-CCO57_RS24730;Name=CCO57_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24730;old_locus_tag=CCO57_21770 NZ_NPMC01000020.1 Protein Homology CDS 556 681 . + 0 ID=cds-WP_000457876.1;Parent=gene-CCO57_RS24730;Dbxref=GenBank:WP_000457876.1;Name=WP_000457876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=CCO57_RS24730;product=hypothetical protein;protein_id=WP_000457876.1;transl_table=11 NZ_NPMC01000020.1 RefSeq pseudogene 1014 2039 . + . ID=gene-CCO57_RS21800;Name=CCO57_RS21800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21800;old_locus_tag=CCO57_21775;pseudo=true NZ_NPMC01000020.1 Protein Homology CDS 1014 2039 . + 0 ID=cds-CCO57_RS21800;Parent=gene-CCO57_RS21800;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=CCO57_RS21800;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 2211 4313 . + . ID=gene-CCO57_RS21805;Name=sspH1;gbkey=Gene;gene=sspH1;gene_biotype=protein_coding;locus_tag=CCO57_RS21805;old_locus_tag=CCO57_21780 NZ_NPMC01000020.1 Protein Homology CDS 2211 4313 . + 0 ID=cds-WP_000481981.1;Parent=gene-CCO57_RS21805;Dbxref=GenBank:WP_000481981.1;Name=WP_000481981.1;gbkey=CDS;gene=sspH1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000481981.1;locus_tag=CCO57_RS21805;product=type III secretion system effector E3 ubiquitin transferase SspH1;protein_id=WP_000481981.1;transl_table=11 NZ_NPMC01000020.1 RefSeq pseudogene 4413 4640 . + . ID=gene-CCO57_RS21815;Name=CCO57_RS21815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21815;old_locus_tag=CCO57_21790;partial=true;pseudo=true;start_range=.,4413 NZ_NPMC01000020.1 Protein Homology CDS 4413 4640 . + 0 ID=cds-CCO57_RS21815;Parent=gene-CCO57_RS21815;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807729.1;locus_tag=CCO57_RS21815;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,4413;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 4633 5304 . - . ID=gene-CCO57_RS21820;Name=CCO57_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21820;old_locus_tag=CCO57_21795 NZ_NPMC01000020.1 Protein Homology CDS 4633 5304 . - 0 ID=cds-WP_000334552.1;Parent=gene-CCO57_RS21820;Dbxref=GenBank:WP_000334552.1;Name=WP_000334552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000334630.1;locus_tag=CCO57_RS21820;product=SOS response-associated peptidase;protein_id=WP_000334552.1;transl_table=11 NZ_NPMC01000020.1 RefSeq pseudogene 5603 5770 . + . ID=gene-CCO57_RS21825;Name=CCO57_RS21825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS21825;old_locus_tag=CCO57_21800;partial=true;pseudo=true;start_range=.,5603 NZ_NPMC01000020.1 Protein Homology CDS 5603 5770 . + 0 ID=cds-CCO57_RS21825;Parent=gene-CCO57_RS21825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=CCO57_RS21825;partial=true;product=isocitrate/isopropylmalate family dehydrogenase;pseudo=true;start_range=.,5603;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 6216 7340 . + . ID=gene-CCO57_RS21830;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=CCO57_RS21830;old_locus_tag=CCO57_21805 NZ_NPMC01000020.1 Protein Homology CDS 6216 7340 . + 0 ID=cds-WP_023214514.1;Parent=gene-CCO57_RS21830;Dbxref=GenBank:WP_023214514.1;Name=WP_023214514.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=CCO57_RS21830;product=type III secretion system effector SopF;protein_id=WP_023214514.1;transl_table=11 NZ_NPMC01000020.1 RefSeq pseudogene 7530 7610 . + . ID=gene-CCO57_RS24735;Name=CCO57_RS24735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24735;partial=true;pseudo=true;start_range=.,7530 NZ_NPMC01000020.1 Protein Homology CDS 7530 7610 . + 0 ID=cds-CCO57_RS24735;Parent=gene-CCO57_RS24735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505044.1;locus_tag=CCO57_RS24735;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,7530;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 7776 8003 . - . ID=gene-CCO57_RS24740;Name=CCO57_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24740;old_locus_tag=CCO57_21815 NZ_NPMC01000020.1 Protein Homology CDS 7776 8003 . - 0 ID=cds-WP_000787627.1;Parent=gene-CCO57_RS24740;Dbxref=GenBank:WP_000787627.1;Name=WP_000787627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787627.1;locus_tag=CCO57_RS24740;product=hypothetical protein;protein_id=WP_000787627.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 8325 9113 . - . ID=gene-CCO57_RS21845;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=CCO57_RS21845;old_locus_tag=CCO57_21820 NZ_NPMC01000020.1 Protein Homology CDS 8325 9113 . - 0 ID=cds-WP_020898689.1;Parent=gene-CCO57_RS21845;Dbxref=GenBank:WP_020898689.1;Name=WP_020898689.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=CCO57_RS21845;product=putative envelope lipoprotein EnvF;protein_id=WP_020898689.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 9603 9842 . - . ID=gene-CCO57_RS21850;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=CCO57_RS21850;old_locus_tag=CCO57_21825 NZ_NPMC01000020.1 Protein Homology CDS 9603 9842 . - 0 ID=cds-WP_000497451.1;Parent=gene-CCO57_RS21850;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=CCO57_RS21850;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 10033 10554 . - . ID=gene-CCO57_RS21855;Name=CCO57_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21855;old_locus_tag=CCO57_21830 NZ_NPMC01000020.1 Protein Homology CDS 10033 10554 . - 0 ID=cds-WP_080087285.1;Parent=gene-CCO57_RS21855;Dbxref=GenBank:WP_080087285.1;Name=WP_080087285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=CCO57_RS21855;product=ricin-type beta-trefoil lectin domain protein;protein_id=WP_080087285.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 10971 11183 . - . ID=gene-CCO57_RS21860;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=CCO57_RS21860;old_locus_tag=CCO57_21835 NZ_NPMC01000020.1 Protein Homology CDS 10971 11183 . - 0 ID=cds-WP_001537306.1;Parent=gene-CCO57_RS21860;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=CCO57_RS21860;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 11315 11578 . - . ID=gene-CCO57_RS21865;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=CCO57_RS21865;old_locus_tag=CCO57_21840 NZ_NPMC01000020.1 Protein Homology CDS 11315 11578 . - 0 ID=cds-WP_012664625.1;Parent=gene-CCO57_RS21865;Dbxref=GenBank:WP_012664625.1;Name=WP_012664625.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=CCO57_RS21865;product=virulence protein PagD;protein_id=WP_012664625.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 12384 12941 . + . ID=gene-CCO57_RS21880;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=CCO57_RS21880;old_locus_tag=CCO57_21855 NZ_NPMC01000020.1 Protein Homology CDS 12384 12941 . + 0 ID=cds-WP_000789472.1;Parent=gene-CCO57_RS21880;Dbxref=GenBank:WP_000789472.1;Name=WP_000789472.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=CCO57_RS21880;product=virulence membrane protein PagC;protein_id=WP_000789472.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 13347 13423 . + . ID=gene-CCO57_RS21885;Name=CCO57_RS21885;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS21885;old_locus_tag=CCO57_21860 NZ_NPMC01000020.1 tRNAscan-SE tRNA 13347 13423 . + . ID=rna-CCO57_RS21885;Parent=gene-CCO57_RS21885;anticodon=(pos:13381..13383);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS21885;product=tRNA-Arg NZ_NPMC01000020.1 tRNAscan-SE exon 13347 13423 . + . ID=exon-CCO57_RS21885-1;Parent=rna-CCO57_RS21885;anticodon=(pos:13381..13383);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS21885;product=tRNA-Arg NZ_NPMC01000020.1 RefSeq gene 14178 14522 . - . ID=gene-CCO57_RS21890;Name=CCO57_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21890;old_locus_tag=CCO57_21865 NZ_NPMC01000020.1 Protein Homology CDS 14178 14522 . - 0 ID=cds-WP_001628919.1;Parent=gene-CCO57_RS21890;Dbxref=GenBank:WP_001628919.1;Name=WP_001628919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=CCO57_RS21890;product=c-type lysozyme inhibitor;protein_id=WP_001628919.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 14900 15025 . + . ID=gene-CCO57_RS24825;Name=CCO57_RS24825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24825;old_locus_tag=CCO57_21870 NZ_NPMC01000020.1 Protein Homology CDS 14900 15025 . + 0 ID=cds-WP_000758944.1;Parent=gene-CCO57_RS24825;Dbxref=GenBank:WP_000758944.1;Name=WP_000758944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000758943.1;locus_tag=CCO57_RS24825;product=hypothetical protein;protein_id=WP_000758944.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 15237 15467 . + . ID=gene-CCO57_RS21900;Name=CCO57_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21900;old_locus_tag=CCO57_21875 NZ_NPMC01000020.1 Protein Homology CDS 15237 15467 . + 0 ID=cds-WP_094915159.1;Parent=gene-CCO57_RS21900;Dbxref=GenBank:WP_094915159.1;Name=WP_094915159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=CCO57_RS21900;product=hypothetical protein;protein_id=WP_094915159.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 15662 16129 . + . ID=gene-CCO57_RS21905;Name=CCO57_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21905;old_locus_tag=CCO57_21880 NZ_NPMC01000020.1 Protein Homology CDS 15662 16129 . + 0 ID=cds-WP_001218117.1;Parent=gene-CCO57_RS21905;Dbxref=GenBank:WP_001218117.1;Name=WP_001218117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=CCO57_RS21905;product=Hsp20 family protein;protein_id=WP_001218117.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 16468 17511 . + . ID=gene-CCO57_RS21910;Name=CCO57_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21910;old_locus_tag=CCO57_21885 NZ_NPMC01000020.1 Protein Homology CDS 16468 17511 . + 0 ID=cds-WP_094915160.1;Parent=gene-CCO57_RS21910;Dbxref=GenBank:WP_094915160.1;Name=WP_094915160.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=CCO57_RS21910;product=sialidase family protein;protein_id=WP_094915160.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 17593 18123 . - . ID=gene-CCO57_RS21915;Name=CCO57_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21915;old_locus_tag=CCO57_21890 NZ_NPMC01000020.1 Protein Homology CDS 17593 18123 . - 0 ID=cds-WP_000929974.1;Parent=gene-CCO57_RS21915;Dbxref=GenBank:WP_000929974.1;Name=WP_000929974.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=CCO57_RS21915;product=cytochrome b;protein_id=WP_000929974.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 18272 18586 . - . ID=gene-CCO57_RS21920;Name=CCO57_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21920;old_locus_tag=CCO57_21895 NZ_NPMC01000020.1 Protein Homology CDS 18272 18586 . - 0 ID=cds-WP_000182479.1;Parent=gene-CCO57_RS21920;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=CCO57_RS21920;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 19268 20902 . + . ID=gene-CCO57_RS21925;Name=CCO57_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21925;old_locus_tag=CCO57_21900 NZ_NPMC01000020.1 Protein Homology CDS 19268 20902 . + 0 ID=cds-WP_079841412.1;Parent=gene-CCO57_RS21925;Dbxref=GenBank:WP_079841412.1;Name=WP_079841412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=CCO57_RS21925;product=ABC transporter substrate-binding protein;protein_id=WP_079841412.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 20902 21876 . + . ID=gene-CCO57_RS21930;Name=CCO57_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21930;old_locus_tag=CCO57_21905 NZ_NPMC01000020.1 Protein Homology CDS 20902 21876 . + 0 ID=cds-WP_094915161.1;Parent=gene-CCO57_RS21930;Dbxref=GenBank:WP_094915161.1;Name=WP_094915161.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=CCO57_RS21930;product=ABC transporter permease;protein_id=WP_094915161.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 21866 22678 . + . ID=gene-CCO57_RS21935;Name=CCO57_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21935;old_locus_tag=CCO57_21910 NZ_NPMC01000020.1 Protein Homology CDS 21866 22678 . + 0 ID=cds-WP_000966648.1;Parent=gene-CCO57_RS21935;Dbxref=GenBank:WP_000966648.1;Name=WP_000966648.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=CCO57_RS21935;product=ABC transporter permease;protein_id=WP_000966648.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 22672 23469 . + . ID=gene-CCO57_RS21940;Name=CCO57_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21940;old_locus_tag=CCO57_21915 NZ_NPMC01000020.1 Protein Homology CDS 22672 23469 . + 0 ID=cds-WP_023257881.1;Parent=gene-CCO57_RS21940;Dbxref=GenBank:WP_023257881.1;Name=WP_023257881.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=CCO57_RS21940;product=ATP-binding cassette domain-containing protein;protein_id=WP_023257881.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 23463 24053 . + . ID=gene-CCO57_RS21945;Name=CCO57_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21945;old_locus_tag=CCO57_21920 NZ_NPMC01000020.1 Protein Homology CDS 23463 24053 . + 0 ID=cds-WP_023257882.1;Parent=gene-CCO57_RS21945;Dbxref=GenBank:WP_023257882.1;Name=WP_023257882.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=CCO57_RS21945;product=ATP-binding cassette domain-containing protein;protein_id=WP_023257882.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 24135 25268 . - . ID=gene-CCO57_RS21950;Name=CCO57_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21950;old_locus_tag=CCO57_21925 NZ_NPMC01000020.1 Protein Homology CDS 24135 25268 . - 0 ID=cds-WP_000456065.1;Parent=gene-CCO57_RS21950;Dbxref=GenBank:WP_000456065.1;Name=WP_000456065.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=CCO57_RS21950;product=mechanosensitive ion channel family protein;protein_id=WP_000456065.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 25462 25788 . + . ID=gene-CCO57_RS21955;Name=CCO57_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21955;old_locus_tag=CCO57_21930 NZ_NPMC01000020.1 Protein Homology CDS 25462 25788 . + 0 ID=cds-WP_001183699.1;Parent=gene-CCO57_RS21955;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=CCO57_RS21955;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 25797 25873 . + . ID=gene-CCO57_RS21960;Name=CCO57_RS21960;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS21960;old_locus_tag=CCO57_21935 NZ_NPMC01000020.1 tRNAscan-SE tRNA 25797 25873 . + . ID=rna-CCO57_RS21960;Parent=gene-CCO57_RS21960;anticodon=(pos:25831..25833);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS21960;product=tRNA-Arg NZ_NPMC01000020.1 tRNAscan-SE exon 25797 25873 . + . ID=exon-CCO57_RS21960-1;Parent=rna-CCO57_RS21960;anticodon=(pos:25831..25833);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS21960;product=tRNA-Arg NZ_NPMC01000020.1 RefSeq gene 25986 26633 . + . ID=gene-CCO57_RS21965;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=CCO57_RS21965;old_locus_tag=CCO57_21940 NZ_NPMC01000020.1 Protein Homology CDS 25986 26633 . + 0 ID=cds-WP_001537483.1;Parent=gene-CCO57_RS21965;Dbxref=GenBank:WP_001537483.1;Name=WP_001537483.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=CCO57_RS21965;product=metal-binding protein ZinT;protein_id=WP_001537483.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 26742 27530 . + . ID=gene-CCO57_RS21970;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=CCO57_RS21970;old_locus_tag=CCO57_21945 NZ_NPMC01000020.1 Protein Homology CDS 26742 27530 . + 0 ID=cds-WP_001633210.1;Parent=gene-CCO57_RS21970;Dbxref=GenBank:WP_001633210.1;Name=WP_001633210.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=CCO57_RS21970;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_001633210.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 27675 28268 . + . ID=gene-CCO57_RS21975;Name=CCO57_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21975;old_locus_tag=CCO57_21950 NZ_NPMC01000020.1 Protein Homology CDS 27675 28268 . + 0 ID=cds-WP_001562706.1;Parent=gene-CCO57_RS21975;Dbxref=GenBank:WP_001562706.1;Name=WP_001562706.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=CCO57_RS21975;product=helix-turn-helix domain-containing protein;protein_id=WP_001562706.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 28337 29185 . + . ID=gene-CCO57_RS21980;Name=CCO57_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21980;old_locus_tag=CCO57_21955 NZ_NPMC01000020.1 Protein Homology CDS 28337 29185 . + 0 ID=cds-WP_000190263.1;Parent=gene-CCO57_RS21980;Dbxref=GenBank:WP_000190263.1;Name=WP_000190263.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=CCO57_RS21980;product=MerR family transcriptional regulator;protein_id=WP_000190263.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 29440 29688 . - . ID=gene-CCO57_RS21990;Name=CCO57_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS21990;old_locus_tag=CCO57_21965 NZ_NPMC01000020.1 Protein Homology CDS 29440 29688 . - 0 ID=cds-WP_000208086.1;Parent=gene-CCO57_RS21990;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=CCO57_RS21990;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_NPMC01000020.1 RefSeq pseudogene 29767 29921 . - . ID=gene-CCO57_RS24745;Name=CCO57_RS24745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24745;old_locus_tag=CCO57_21970;pseudo=true NZ_NPMC01000020.1 Protein Homology CDS 29767 29921 . - 0 ID=cds-CCO57_RS24745;Parent=gene-CCO57_RS24745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=CCO57_RS24745;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 30004 30549 . + . ID=gene-CCO57_RS22000;Name=CCO57_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22000;old_locus_tag=CCO57_21975 NZ_NPMC01000020.1 Protein Homology CDS 30004 30549 . + 0 ID=cds-WP_000617982.1;Parent=gene-CCO57_RS22000;Dbxref=GenBank:WP_000617982.1;Name=WP_000617982.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=CCO57_RS22000;product=chorismate mutase;protein_id=WP_000617982.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 30746 31384 . + . ID=gene-CCO57_RS22005;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=CCO57_RS22005;old_locus_tag=CCO57_21980 NZ_NPMC01000020.1 Protein Homology CDS 30746 31384 . + 0 ID=cds-WP_000457190.1;Parent=gene-CCO57_RS22005;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=CCO57_RS22005;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 31557 31919 . + . ID=gene-CCO57_RS22015;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=CCO57_RS22015;old_locus_tag=CCO57_21990 NZ_NPMC01000020.1 Protein Homology CDS 31557 31919 . + 0 ID=cds-WP_001248993.1;Parent=gene-CCO57_RS22015;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=CCO57_RS22015;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 31922 32104 . + . ID=gene-CCO57_RS22020;Name=CCO57_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22020;old_locus_tag=CCO57_21995 NZ_NPMC01000020.1 Protein Homology CDS 31922 32104 . + 0 ID=cds-WP_000513733.1;Parent=gene-CCO57_RS22020;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=CCO57_RS22020;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 32334 32975 . + . ID=gene-CCO57_RS22025;Name=CCO57_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22025;old_locus_tag=CCO57_22000 NZ_NPMC01000020.1 Protein Homology CDS 32334 32975 . + 0 ID=cds-WP_000762774.1;Parent=gene-CCO57_RS22025;Dbxref=GenBank:WP_000762774.1;Name=WP_000762774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=CCO57_RS22025;product=hypothetical protein;protein_id=WP_000762774.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 33289 33537 . + . ID=gene-CCO57_RS22035;Name=CCO57_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22035;old_locus_tag=CCO57_22010 NZ_NPMC01000020.1 Protein Homology CDS 33289 33537 . + 0 ID=cds-WP_000512149.1;Parent=gene-CCO57_RS22035;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=CCO57_RS22035;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 33676 33774 . - . ID=gene-CCO57_RS22040;Name=CCO57_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22040;old_locus_tag=CCO57_22015 NZ_NPMC01000020.1 Protein Homology CDS 33676 33774 . - 0 ID=cds-WP_001589065.1;Parent=gene-CCO57_RS22040;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=CCO57_RS22040;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 33970 34221 . + . ID=gene-CCO57_RS22045;Name=CCO57_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22045;old_locus_tag=CCO57_22020 NZ_NPMC01000020.1 Protein Homology CDS 33970 34221 . + 0 ID=cds-WP_000673492.1;Parent=gene-CCO57_RS22045;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=CCO57_RS22045;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 34290 34601 . + . ID=gene-CCO57_RS22050;Name=CCO57_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22050;old_locus_tag=CCO57_22025 NZ_NPMC01000020.1 Protein Homology CDS 34290 34601 . + 0 ID=cds-WP_000487132.1;Parent=gene-CCO57_RS22050;Dbxref=GenBank:WP_000487132.1;Name=WP_000487132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=CCO57_RS22050;product=hypothetical protein;protein_id=WP_000487132.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 34587 34934 . - . ID=gene-CCO57_RS22055;Name=CCO57_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22055;old_locus_tag=CCO57_22030 NZ_NPMC01000020.1 Protein Homology CDS 34587 34934 . - 0 ID=cds-WP_001222528.1;Parent=gene-CCO57_RS22055;Dbxref=GenBank:WP_001222528.1;Name=WP_001222528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=CCO57_RS22055;product=DUF488 domain-containing protein;protein_id=WP_001222528.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 35053 36237 . - . ID=gene-CCO57_RS22060;Name=CCO57_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22060;old_locus_tag=CCO57_22035 NZ_NPMC01000020.1 Protein Homology CDS 35053 36237 . - 0 ID=cds-WP_000205357.1;Parent=gene-CCO57_RS22060;Dbxref=GenBank:WP_000205357.1;Name=WP_000205357.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=CCO57_RS22060;product=CynX/NimT family MFS transporter;protein_id=WP_000205357.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 36338 37132 . + . ID=gene-CCO57_RS22065;Name=CCO57_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22065;old_locus_tag=CCO57_22040 NZ_NPMC01000020.1 Protein Homology CDS 36338 37132 . + 0 ID=cds-WP_000579793.1;Parent=gene-CCO57_RS22065;Dbxref=GenBank:WP_000579793.1;Name=WP_000579793.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=CCO57_RS22065;product=AraC family transcriptional regulator;protein_id=WP_000579793.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 37112 37558 . - . ID=gene-CCO57_RS22070;Name=CCO57_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22070;old_locus_tag=CCO57_22045 NZ_NPMC01000020.1 Protein Homology CDS 37112 37558 . - 0 ID=cds-WP_000460698.1;Parent=gene-CCO57_RS22070;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=CCO57_RS22070;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 37764 37871 . + . ID=gene-CCO57_RS22075;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=CCO57_RS22075;old_locus_tag=CCO57_22050 NZ_NPMC01000020.1 Protein Homology CDS 37764 37871 . + 0 ID=cds-WP_000272232.1;Parent=gene-CCO57_RS22075;Dbxref=GenBank:WP_000272232.1;Name=WP_000272232.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=CCO57_RS22075;product=small membrane protein YoaI;protein_id=WP_000272232.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 37868 38386 . - . ID=gene-CCO57_RS22080;Name=CCO57_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22080;old_locus_tag=CCO57_22055 NZ_NPMC01000020.1 Protein Homology CDS 37868 38386 . - 0 ID=cds-WP_162149666.1;Parent=gene-CCO57_RS22080;Dbxref=GenBank:WP_162149666.1;Name=WP_162149666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=CCO57_RS22080;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_162149666.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 38436 39929 . - . ID=gene-CCO57_RS22085;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=CCO57_RS22085;old_locus_tag=CCO57_22060 NZ_NPMC01000020.1 Protein Homology CDS 38436 39929 . - 0 ID=cds-WP_001048654.1;Parent=gene-CCO57_RS22085;Dbxref=GenBank:WP_001048654.1;Name=WP_001048654.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=CCO57_RS22085;product=diguanylate cyclase DgcJ;protein_id=WP_001048654.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 40223 40429 . + . ID=gene-CCO57_RS24235;Name=CCO57_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24235 NZ_NPMC01000020.1 GeneMarkS-2+ CDS 40223 40429 . + 0 ID=cds-WP_024132288.1;Parent=gene-CCO57_RS24235;Dbxref=GenBank:WP_024132288.1;Name=WP_024132288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24235;product=hypothetical protein;protein_id=WP_024132288.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 40579 41865 . - . ID=gene-CCO57_RS22090;Name=CCO57_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22090;old_locus_tag=CCO57_22065 NZ_NPMC01000020.1 Protein Homology CDS 40579 41865 . - 0 ID=cds-WP_000219714.1;Parent=gene-CCO57_RS22090;Dbxref=GenBank:WP_000219714.1;Name=WP_000219714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=CCO57_RS22090;product=YeaH/YhbH family protein;protein_id=WP_000219714.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 41988 43922 . - . ID=gene-CCO57_RS22095;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=CCO57_RS22095;old_locus_tag=CCO57_22070 NZ_NPMC01000020.1 Protein Homology CDS 41988 43922 . - 0 ID=cds-WP_001518010.1;Parent=gene-CCO57_RS22095;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=CCO57_RS22095;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11 NZ_NPMC01000020.1 RefSeq pseudogene 44125 44415 . + . ID=gene-CCO57_RS24750;Name=CCO57_RS24750;end_range=44415,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24750;partial=true;pseudo=true NZ_NPMC01000020.1 Protein Homology CDS 44125 44415 . + 0 ID=cds-CCO57_RS24750;Parent=gene-CCO57_RS24750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=44415,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012464.6;locus_tag=CCO57_RS24750;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 44437 45948 . + . ID=gene-CCO57_RS22100;Name=CCO57_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22100;old_locus_tag=CCO57_22075 NZ_NPMC01000020.1 Protein Homology CDS 44437 45948 . + 0 ID=cds-WP_231125451.1;Parent=gene-CCO57_RS22100;Dbxref=GenBank:WP_231125451.1;Name=WP_231125451.1;Ontology_term=GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF019149.6;locus_tag=CCO57_RS22100;product=recombinase family protein;protein_id=WP_231125451.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 46383 46535 . + . ID=gene-CCO57_RS24370;Name=CCO57_RS24370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24370 NZ_NPMC01000020.1 GeneMarkS-2+ CDS 46383 46535 . + 0 ID=cds-WP_156016791.1;Parent=gene-CCO57_RS24370;Dbxref=GenBank:WP_156016791.1;Name=WP_156016791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24370;product=hypothetical protein;protein_id=WP_156016791.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 46640 46906 . + . ID=gene-CCO57_RS22105;Name=CCO57_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22105;old_locus_tag=CCO57_22080 NZ_NPMC01000020.1 GeneMarkS-2+ CDS 46640 46906 . + 0 ID=cds-WP_080167087.1;Parent=gene-CCO57_RS22105;Dbxref=GenBank:WP_080167087.1;Name=WP_080167087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS22105;product=hypothetical protein;protein_id=WP_080167087.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 46953 47873 . + . ID=gene-CCO57_RS22110;Name=CCO57_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22110;old_locus_tag=CCO57_22085 NZ_NPMC01000020.1 GeneMarkS-2+ CDS 46953 47873 . + 0 ID=cds-WP_094915162.1;Parent=gene-CCO57_RS22110;Dbxref=GenBank:WP_094915162.1;Name=WP_094915162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS22110;product=hypothetical protein;protein_id=WP_094915162.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 47849 48880 . + . ID=gene-CCO57_RS22115;Name=CCO57_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22115;old_locus_tag=CCO57_22090 NZ_NPMC01000020.1 GeneMarkS-2+ CDS 47849 48880 . + 0 ID=cds-WP_140428186.1;Parent=gene-CCO57_RS22115;Dbxref=GenBank:WP_140428186.1;Name=WP_140428186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS22115;product=hypothetical protein;protein_id=WP_140428186.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 49377 49712 . + . ID=gene-CCO57_RS22125;Name=CCO57_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22125;old_locus_tag=CCO57_22100 NZ_NPMC01000020.1 GeneMarkS-2+ CDS 49377 49712 . + 0 ID=cds-WP_094888792.1;Parent=gene-CCO57_RS22125;Dbxref=GenBank:WP_094888792.1;Name=WP_094888792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS22125;product=hypothetical protein;protein_id=WP_094888792.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 50425 51723 . + . ID=gene-CCO57_RS22130;Name=CCO57_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22130;old_locus_tag=CCO57_22105 NZ_NPMC01000020.1 Protein Homology CDS 50425 51723 . + 0 ID=cds-WP_231125452.1;Parent=gene-CCO57_RS22130;Dbxref=GenBank:WP_231125452.1;Name=WP_231125452.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003832121.1;locus_tag=CCO57_RS22130;product=sensor domain-containing diguanylate cyclase;protein_id=WP_231125452.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 51928 52239 . + . ID=gene-CCO57_RS22135;Name=CCO57_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22135;old_locus_tag=CCO57_22110 NZ_NPMC01000020.1 GeneMarkS-2+ CDS 51928 52239 . + 0 ID=cds-WP_080167082.1;Parent=gene-CCO57_RS22135;Dbxref=GenBank:WP_080167082.1;Name=WP_080167082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS22135;product=hypothetical protein;protein_id=WP_080167082.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 52983 53537 . + . ID=gene-CCO57_RS22145;Name=CCO57_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22145;old_locus_tag=CCO57_22120 NZ_NPMC01000020.1 Protein Homology CDS 52983 53537 . + 0 ID=cds-WP_231125449.1;Parent=gene-CCO57_RS22145;Dbxref=GenBank:WP_231125449.1;Name=WP_231125449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355337.1;locus_tag=CCO57_RS22145;product=terminase small subunit;protein_id=WP_231125449.1;transl_table=11 NZ_NPMC01000020.1 RefSeq gene 53452 54264 . + . ID=gene-CCO57_RS22150;Name=CCO57_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22150;old_locus_tag=CCO57_22125 NZ_NPMC01000020.1 Protein Homology CDS 53452 54264 . + 0 ID=cds-WP_094888794.1;Parent=gene-CCO57_RS22150;Dbxref=GenBank:WP_094888794.1;Name=WP_094888794.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF017673.6;locus_tag=CCO57_RS22150;product=phage terminase large subunit family protein;protein_id=WP_094888794.1;transl_table=11 ##sequence-region NZ_NPMC01000021.1 1 54197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000021.1 RefSeq region 1 54197 . + . ID=NZ_NPMC01000021.1:1..54197;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000021.1 RefSeq gene 505 3078 . - . ID=gene-CCO57_RS22155;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CCO57_RS22155;old_locus_tag=CCO57_22130 NZ_NPMC01000021.1 Protein Homology CDS 505 3078 . - 0 ID=cds-WP_023232932.1;Parent=gene-CCO57_RS22155;Dbxref=GenBank:WP_023232932.1;Name=WP_023232932.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=CCO57_RS22155;product=ATP-dependent chaperone ClpB;protein_id=WP_023232932.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 3208 3939 . - . ID=gene-CCO57_RS22160;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=CCO57_RS22160;old_locus_tag=CCO57_22135 NZ_NPMC01000021.1 Protein Homology CDS 3208 3939 . - 0 ID=cds-WP_000992639.1;Parent=gene-CCO57_RS22160;Dbxref=GenBank:WP_000992639.1;Name=WP_000992639.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=CCO57_RS22160;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992639.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 3936 4916 . - . ID=gene-CCO57_RS22165;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=CCO57_RS22165;old_locus_tag=CCO57_22140 NZ_NPMC01000021.1 Protein Homology CDS 3936 4916 . - 0 ID=cds-WP_000079130.1;Parent=gene-CCO57_RS22165;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=CCO57_RS22165;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 5048 5785 . + . ID=gene-CCO57_RS22170;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=CCO57_RS22170;old_locus_tag=CCO57_22145 NZ_NPMC01000021.1 Protein Homology CDS 5048 5785 . + 0 ID=cds-WP_000197660.1;Parent=gene-CCO57_RS22170;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=CCO57_RS22170;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 6057 6395 . + . ID=gene-CCO57_RS22175;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CCO57_RS22175;old_locus_tag=CCO57_22150 NZ_NPMC01000021.1 Protein Homology CDS 6057 6395 . + 0 ID=cds-WP_000178449.1;Parent=gene-CCO57_RS22175;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=CCO57_RS22175;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_NPMC01000021.1 cmsearch sequence_feature 6498 6623 . + . ID=id-NZ_NPMC01000021.1:6498..6623;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMC01000021.1 RefSeq gene 6499 6546 . + . ID=gene-CCO57_RS24240;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=CCO57_RS24240 NZ_NPMC01000021.1 Protein Homology CDS 6499 6546 . + 0 ID=cds-WP_010989056.1;Parent=gene-CCO57_RS24240;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=CCO57_RS24240;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 6646 7806 . + . ID=gene-CCO57_RS22180;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=CCO57_RS22180;old_locus_tag=CCO57_22155 NZ_NPMC01000021.1 Protein Homology CDS 6646 7806 . + 0 ID=cds-WP_000200082.1;Parent=gene-CCO57_RS22180;Dbxref=GenBank:WP_000200082.1;Name=WP_000200082.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=CCO57_RS22180;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200082.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 7767 8675 . - . ID=gene-CCO57_RS22185;Name=CCO57_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22185;old_locus_tag=CCO57_22160 NZ_NPMC01000021.1 Protein Homology CDS 7767 8675 . - 0 ID=cds-WP_001607154.1;Parent=gene-CCO57_RS22185;Dbxref=GenBank:WP_001607154.1;Name=WP_001607154.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=CCO57_RS22185;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_001607154.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 8733 9854 . - . ID=gene-CCO57_RS22190;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=CCO57_RS22190;old_locus_tag=CCO57_22165 NZ_NPMC01000021.1 Protein Homology CDS 8733 9854 . - 0 ID=cds-WP_023136471.1;Parent=gene-CCO57_RS22190;Dbxref=GenBank:WP_023136471.1;Name=WP_023136471.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=CCO57_RS22190;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_023136471.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 9864 10934 . - . ID=gene-CCO57_RS22195;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=CCO57_RS22195;old_locus_tag=CCO57_22170 NZ_NPMC01000021.1 Protein Homology CDS 9864 10934 . - 0 ID=cds-WP_001168062.1;Parent=gene-CCO57_RS22195;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=CCO57_RS22195;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 11374 11892 . + . ID=gene-CCO57_RS22200;Name=CCO57_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22200;old_locus_tag=CCO57_22175 NZ_NPMC01000021.1 Protein Homology CDS 11374 11892 . + 0 ID=cds-WP_001212379.1;Parent=gene-CCO57_RS22200;Dbxref=GenBank:WP_001212379.1;Name=WP_001212379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=CCO57_RS22200;product=YfiR family protein;protein_id=WP_001212379.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 11885 13105 . + . ID=gene-CCO57_RS22205;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=CCO57_RS22205;old_locus_tag=CCO57_22180 NZ_NPMC01000021.1 Protein Homology CDS 11885 13105 . + 0 ID=cds-WP_023230071.1;Parent=gene-CCO57_RS22205;Dbxref=GenBank:WP_023230071.1;Name=WP_023230071.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=CCO57_RS22205;product=diguanylate cyclase DgcN;protein_id=WP_023230071.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 13262 13609 . - . ID=gene-CCO57_RS22210;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CCO57_RS22210;old_locus_tag=CCO57_22185 NZ_NPMC01000021.1 Protein Homology CDS 13262 13609 . - 0 ID=cds-WP_000065257.1;Parent=gene-CCO57_RS22210;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=CCO57_RS22210;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 13650 14417 . - . ID=gene-CCO57_RS22215;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CCO57_RS22215;old_locus_tag=CCO57_22190 NZ_NPMC01000021.1 Protein Homology CDS 13650 14417 . - 0 ID=cds-WP_000469807.1;Parent=gene-CCO57_RS22215;Dbxref=GenBank:WP_000469807.1;Name=WP_000469807.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=CCO57_RS22215;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469807.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 14462 15010 . - . ID=gene-CCO57_RS22220;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CCO57_RS22220;old_locus_tag=CCO57_22195 NZ_NPMC01000021.1 Protein Homology CDS 14462 15010 . - 0 ID=cds-WP_000043266.1;Parent=gene-CCO57_RS22220;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=CCO57_RS22220;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 15029 15277 . - . ID=gene-CCO57_RS22225;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CCO57_RS22225;old_locus_tag=CCO57_22200 NZ_NPMC01000021.1 Protein Homology CDS 15029 15277 . - 0 ID=cds-WP_000256453.1;Parent=gene-CCO57_RS22225;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=CCO57_RS22225;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 15530 16891 . - . ID=gene-CCO57_RS22230;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CCO57_RS22230;old_locus_tag=CCO57_22205 NZ_NPMC01000021.1 Protein Homology CDS 15530 16891 . - 0 ID=cds-WP_000460052.1;Parent=gene-CCO57_RS22230;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=CCO57_RS22230;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 17057 17848 . + . ID=gene-CCO57_RS22235;Name=CCO57_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22235;old_locus_tag=CCO57_22210 NZ_NPMC01000021.1 Protein Homology CDS 17057 17848 . + 0 ID=cds-WP_001537507.1;Parent=gene-CCO57_RS22235;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=CCO57_RS22235;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 17868 19154 . + . ID=gene-CCO57_RS22240;Name=CCO57_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22240;old_locus_tag=CCO57_22215 NZ_NPMC01000021.1 Protein Homology CDS 17868 19154 . + 0 ID=cds-WP_127172650.1;Parent=gene-CCO57_RS22240;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=CCO57_RS22240;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 19275 19880 . + . ID=gene-CCO57_RS22245;Name=CCO57_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22245;old_locus_tag=CCO57_22220 NZ_NPMC01000021.1 Protein Homology CDS 19275 19880 . + 0 ID=cds-WP_023136472.1;Parent=gene-CCO57_RS22245;Dbxref=GenBank:WP_023136472.1;Name=WP_023136472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=CCO57_RS22245;product=DUF6630 family protein;protein_id=WP_023136472.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 19915 20505 . - . ID=gene-CCO57_RS22250;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CCO57_RS22250;old_locus_tag=CCO57_22225 NZ_NPMC01000021.1 Protein Homology CDS 19915 20505 . - 0 ID=cds-WP_001518875.1;Parent=gene-CCO57_RS22250;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=CCO57_RS22250;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 20628 21506 . + . ID=gene-CCO57_RS22260;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=CCO57_RS22260;old_locus_tag=CCO57_22235 NZ_NPMC01000021.1 Protein Homology CDS 20628 21506 . + 0 ID=cds-WP_001059160.1;Parent=gene-CCO57_RS22260;Dbxref=GenBank:WP_001059160.1;Name=WP_001059160.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=CCO57_RS22260;product=NAD(+) kinase;protein_id=WP_001059160.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 21592 23253 . + . ID=gene-CCO57_RS22265;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CCO57_RS22265;old_locus_tag=CCO57_22240 NZ_NPMC01000021.1 Protein Homology CDS 21592 23253 . + 0 ID=cds-WP_000880965.1;Parent=gene-CCO57_RS22265;Dbxref=GenBank:WP_000880965.1;Name=WP_000880965.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=CCO57_RS22265;product=DNA repair protein RecN;protein_id=WP_000880965.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 23402 23740 . + . ID=gene-CCO57_RS22270;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=CCO57_RS22270;old_locus_tag=CCO57_22245 NZ_NPMC01000021.1 Protein Homology CDS 23402 23740 . + 0 ID=cds-WP_001203445.1;Parent=gene-CCO57_RS22270;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=CCO57_RS22270;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 23902 24192 . - . ID=gene-CCO57_RS22275;Name=CCO57_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22275;old_locus_tag=CCO57_22250 NZ_NPMC01000021.1 Protein Homology CDS 23902 24192 . - 0 ID=cds-WP_001112990.1;Parent=gene-CCO57_RS22275;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=CCO57_RS22275;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 24182 24619 . - . ID=gene-CCO57_RS22280;Name=CCO57_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22280;old_locus_tag=CCO57_22255 NZ_NPMC01000021.1 Protein Homology CDS 24182 24619 . - 0 ID=cds-WP_001543334.1;Parent=gene-CCO57_RS22280;Dbxref=GenBank:WP_001543334.1;Name=WP_001543334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=CCO57_RS22280;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001543334.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 24808 25290 . + . ID=gene-CCO57_RS22285;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CCO57_RS22285;old_locus_tag=CCO57_22260 NZ_NPMC01000021.1 Protein Homology CDS 24808 25290 . + 0 ID=cds-WP_001518569.1;Parent=gene-CCO57_RS22285;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=CCO57_RS22285;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 25907 37381 . + . ID=gene-CCO57_RS22290;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=CCO57_RS22290;old_locus_tag=CCO57_22265 NZ_NPMC01000021.1 Protein Homology CDS 25907 37381 . + 0 ID=cds-WP_094915164.1;Parent=gene-CCO57_RS22290;Dbxref=GenBank:WP_094915164.1;Name=WP_094915164.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=CCO57_RS22290;product=biofilm-associated protein BapA;protein_id=WP_094915164.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 37446 38855 . + . ID=gene-CCO57_RS22295;Name=CCO57_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22295;old_locus_tag=CCO57_22270 NZ_NPMC01000021.1 Protein Homology CDS 37446 38855 . + 0 ID=cds-WP_000533851.1;Parent=gene-CCO57_RS22295;Dbxref=GenBank:WP_000533851.1;Name=WP_000533851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=CCO57_RS22295;product=TolC family outer membrane protein;protein_id=WP_000533851.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 38852 41032 . + . ID=gene-CCO57_RS22300;Name=CCO57_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22300;old_locus_tag=CCO57_22275 NZ_NPMC01000021.1 Protein Homology CDS 38852 41032 . + 0 ID=cds-WP_000196152.1;Parent=gene-CCO57_RS22300;Dbxref=GenBank:WP_000196152.1;Name=WP_000196152.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=CCO57_RS22300;product=type I secretion system permease/ATPase;protein_id=WP_000196152.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 41040 42203 . + . ID=gene-CCO57_RS22305;Name=CCO57_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22305;old_locus_tag=CCO57_22280 NZ_NPMC01000021.1 Protein Homology CDS 41040 42203 . + 0 ID=cds-WP_072101562.1;Parent=gene-CCO57_RS22305;Dbxref=GenBank:WP_072101562.1;Name=WP_072101562.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=CCO57_RS22305;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_072101562.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 42275 42637 . + . ID=gene-CCO57_RS22310;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CCO57_RS22310;old_locus_tag=CCO57_22285 NZ_NPMC01000021.1 cmsearch tmRNA 42275 42637 . + . ID=rna-CCO57_RS22310;Parent=gene-CCO57_RS22310;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS22310;product=transfer-messenger RNA NZ_NPMC01000021.1 cmsearch exon 42275 42637 . + . ID=exon-CCO57_RS22310-1;Parent=rna-CCO57_RS22310;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS22310;product=transfer-messenger RNA NZ_NPMC01000021.1 RefSeq gene 42803 44032 . + . ID=gene-CCO57_RS22315;Name=CCO57_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22315;old_locus_tag=CCO57_22290 NZ_NPMC01000021.1 Protein Homology CDS 42803 44032 . + 0 ID=cds-WP_094915168.1;Parent=gene-CCO57_RS22315;Dbxref=GenBank:WP_094915168.1;Name=WP_094915168.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF007246.0;locus_tag=CCO57_RS22315;product=integrase domain-containing protein;protein_id=WP_094915168.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 44110 46611 . - . ID=gene-CCO57_RS24755;Name=CCO57_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24755;old_locus_tag=CCO57_22295 NZ_NPMC01000021.1 Protein Homology CDS 44110 46611 . - 0 ID=cds-WP_089590023.1;Parent=gene-CCO57_RS24755;Dbxref=GenBank:WP_089590023.1;Name=WP_089590023.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012492.6;locus_tag=CCO57_RS24755;product=DEAD/DEAH box helicase;protein_id=WP_089590023.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 46604 48073 . - . ID=gene-CCO57_RS22325;Name=CCO57_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22325;old_locus_tag=CCO57_22300 NZ_NPMC01000021.1 GeneMarkS-2+ CDS 46604 48073 . - 0 ID=cds-WP_140428187.1;Parent=gene-CCO57_RS22325;Dbxref=GenBank:WP_140428187.1;Name=WP_140428187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS22325;product=hypothetical protein;protein_id=WP_140428187.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 48060 49046 . - . ID=gene-CCO57_RS22330;Name=CCO57_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22330;old_locus_tag=CCO57_22305 NZ_NPMC01000021.1 GeneMarkS-2+ CDS 48060 49046 . - 0 ID=cds-WP_089590019.1;Parent=gene-CCO57_RS22330;Dbxref=GenBank:WP_089590019.1;Name=WP_089590019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS22330;product=hypothetical protein;protein_id=WP_089590019.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 49393 49938 . - . ID=gene-CCO57_RS22335;Name=CCO57_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22335;old_locus_tag=CCO57_22310 NZ_NPMC01000021.1 GeneMarkS-2+ CDS 49393 49938 . - 0 ID=cds-WP_089590020.1;Parent=gene-CCO57_RS22335;Dbxref=GenBank:WP_089590020.1;Name=WP_089590020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS22335;product=hypothetical protein;protein_id=WP_089590020.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 49989 50303 . - . ID=gene-CCO57_RS24245;Name=CCO57_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24245 NZ_NPMC01000021.1 GeneMarkS-2+ CDS 49989 50303 . - 0 ID=cds-WP_140428188.1;Parent=gene-CCO57_RS24245;Dbxref=GenBank:WP_140428188.1;Name=WP_140428188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24245;product=hypothetical protein;protein_id=WP_140428188.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 50581 51501 . + . ID=gene-CCO57_RS22340;Name=CCO57_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22340;old_locus_tag=CCO57_22315 NZ_NPMC01000021.1 GeneMarkS-2+ CDS 50581 51501 . + 0 ID=cds-WP_089590021.1;Parent=gene-CCO57_RS22340;Dbxref=GenBank:WP_089590021.1;Name=WP_089590021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS22340;product=hypothetical protein;protein_id=WP_089590021.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 51522 52694 . + . ID=gene-CCO57_RS22345;Name=CCO57_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22345;old_locus_tag=CCO57_22320 NZ_NPMC01000021.1 Protein Homology CDS 51522 52694 . + 0 ID=cds-WP_094915167.1;Parent=gene-CCO57_RS22345;Dbxref=GenBank:WP_094915167.1;Name=WP_094915167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.6;locus_tag=CCO57_RS22345;product=DUF3800 domain-containing protein;protein_id=WP_094915167.1;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 52898 53281 . + . ID=gene-CCO57_RS22350;Name=CCO57_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22350;old_locus_tag=CCO57_22325 NZ_NPMC01000021.1 Protein Homology CDS 52898 53281 . + 0 ID=cds-WP_058651862.1;Parent=gene-CCO57_RS22350;Dbxref=GenBank:WP_058651862.1;Name=WP_058651862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001624489.1;locus_tag=CCO57_RS22350;product=hypothetical protein;protein_id=WP_058651862.1;transl_table=11 NZ_NPMC01000021.1 RefSeq pseudogene 53290 54075 . + . ID=gene-CCO57_RS22355;Name=CCO57_RS22355;end_range=54075,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS22355;old_locus_tag=CCO57_22330;partial=true;pseudo=true NZ_NPMC01000021.1 Protein Homology CDS 53290 54075 . + 0 ID=cds-CCO57_RS22355;Parent=gene-CCO57_RS22355;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=54075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000677831.1;locus_tag=CCO57_RS22355;partial=true;product=relaxase/mobilization nuclease domain-containing protein;pseudo=true;transl_table=11 NZ_NPMC01000021.1 RefSeq gene 54102 54197 . - . ID=gene-CCO57_RS22360;Name=CCO57_RS22360;end_range=54197,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22360;old_locus_tag=CCO57_22335;partial=true NZ_NPMC01000021.1 Protein Homology CDS 54102 54197 . - 0 ID=cds-WP_071890408.1;Parent=gene-CCO57_RS22360;Dbxref=GenBank:WP_071890408.1;Name=WP_071890408.1;Ontology_term=GO:0015074;end_range=54197,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=CCO57_RS22360;partial=true;product=IS3 family transposase;protein_id=WP_071890408.1;transl_table=11 ##sequence-region NZ_NPMC01000022.1 1 53570 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000022.1 RefSeq region 1 53570 . + . ID=NZ_NPMC01000022.1:1..53570;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000022.1 RefSeq gene 5 120 . + . ID=gene-CCO57_RS22365;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO57_RS22365;old_locus_tag=CCO57_22340 NZ_NPMC01000022.1 cmsearch rRNA 5 120 . + . ID=rna-CCO57_RS22365;Parent=gene-CCO57_RS22365;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS22365;product=5S ribosomal RNA NZ_NPMC01000022.1 cmsearch exon 5 120 . + . ID=exon-CCO57_RS22365-1;Parent=rna-CCO57_RS22365;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS22365;product=5S ribosomal RNA NZ_NPMC01000022.1 RefSeq gene 175 251 . + . ID=gene-CCO57_RS22370;Name=CCO57_RS22370;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS22370;old_locus_tag=CCO57_22345 NZ_NPMC01000022.1 tRNAscan-SE tRNA 175 251 . + . ID=rna-CCO57_RS22370;Parent=gene-CCO57_RS22370;anticodon=(pos:209..211);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS22370;product=tRNA-Asp NZ_NPMC01000022.1 tRNAscan-SE exon 175 251 . + . ID=exon-CCO57_RS22370-1;Parent=rna-CCO57_RS22370;anticodon=(pos:209..211);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS22370;product=tRNA-Asp NZ_NPMC01000022.1 RefSeq gene 416 1219 . + . ID=gene-CCO57_RS22375;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=CCO57_RS22375;old_locus_tag=CCO57_22350 NZ_NPMC01000022.1 Protein Homology CDS 416 1219 . + 0 ID=cds-WP_000154887.1;Parent=gene-CCO57_RS22375;Dbxref=GenBank:WP_000154887.1;Name=WP_000154887.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=CCO57_RS22375;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000154887.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 1185 2156 . - . ID=gene-CCO57_RS22380;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=CCO57_RS22380;old_locus_tag=CCO57_22355 NZ_NPMC01000022.1 Protein Homology CDS 1185 2156 . - 0 ID=cds-WP_094915169.1;Parent=gene-CCO57_RS22380;Dbxref=GenBank:WP_094915169.1;Name=WP_094915169.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648532.1;locus_tag=CCO57_RS22380;product=DNA-binding transcriptional regulator YafC;protein_id=WP_094915169.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 2261 3436 . + . ID=gene-CCO57_RS22385;Name=CCO57_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22385;old_locus_tag=CCO57_22360 NZ_NPMC01000022.1 Protein Homology CDS 2261 3436 . + 0 ID=cds-WP_001127551.1;Parent=gene-CCO57_RS22385;Dbxref=GenBank:WP_001127551.1;Name=WP_001127551.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=CCO57_RS22385;product=MFS transporter;protein_id=WP_001127551.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 3568 4368 . + . ID=gene-CCO57_RS22390;Name=CCO57_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22390;old_locus_tag=CCO57_22365 NZ_NPMC01000022.1 Protein Homology CDS 3568 4368 . + 0 ID=cds-WP_001230970.1;Parent=gene-CCO57_RS22390;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=CCO57_RS22390;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 4446 5216 . + . ID=gene-CCO57_RS22395;Name=CCO57_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22395;old_locus_tag=CCO57_22370 NZ_NPMC01000022.1 Protein Homology CDS 4446 5216 . + 0 ID=cds-WP_094915170.1;Parent=gene-CCO57_RS22395;Dbxref=GenBank:WP_094915170.1;Name=WP_094915170.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=CCO57_RS22395;product=class I SAM-dependent methyltransferase;protein_id=WP_094915170.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 5272 6639 . - . ID=gene-CCO57_RS22400;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=CCO57_RS22400;old_locus_tag=CCO57_22375 NZ_NPMC01000022.1 Protein Homology CDS 5272 6639 . - 0 ID=cds-WP_000644706.1;Parent=gene-CCO57_RS22400;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=CCO57_RS22400;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 6711 7466 . - . ID=gene-CCO57_RS22405;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=CCO57_RS22405;old_locus_tag=CCO57_22380 NZ_NPMC01000022.1 Protein Homology CDS 6711 7466 . - 0 ID=cds-WP_094915171.1;Parent=gene-CCO57_RS22405;Dbxref=GenBank:WP_094915171.1;Name=WP_094915171.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=CCO57_RS22405;product=hydroxyacylglutathione hydrolase;protein_id=WP_094915171.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 7501 8223 . + . ID=gene-CCO57_RS22410;Name=CCO57_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22410;old_locus_tag=CCO57_22385 NZ_NPMC01000022.1 Protein Homology CDS 7501 8223 . + 0 ID=cds-WP_000801238.1;Parent=gene-CCO57_RS22410;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=CCO57_RS22410;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 8220 8687 . - . ID=gene-CCO57_RS22415;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=CCO57_RS22415;old_locus_tag=CCO57_22390 NZ_NPMC01000022.1 Protein Homology CDS 8220 8687 . - 0 ID=cds-WP_000917872.1;Parent=gene-CCO57_RS22415;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=CCO57_RS22415;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 8751 9482 . + . ID=gene-CCO57_RS22420;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=CCO57_RS22420;old_locus_tag=CCO57_22395 NZ_NPMC01000022.1 Protein Homology CDS 8751 9482 . + 0 ID=cds-WP_001562201.1;Parent=gene-CCO57_RS22420;Dbxref=GenBank:WP_001562201.1;Name=WP_001562201.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=CCO57_RS22420;product=DNA polymerase III subunit epsilon;protein_id=WP_001562201.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 9616 9692 . + . ID=gene-CCO57_RS22425;Name=CCO57_RS22425;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS22425;old_locus_tag=CCO57_22400 NZ_NPMC01000022.1 tRNAscan-SE tRNA 9616 9692 . + . ID=rna-CCO57_RS22425;Parent=gene-CCO57_RS22425;anticodon=(pos:9650..9652);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS22425;product=tRNA-Asp NZ_NPMC01000022.1 tRNAscan-SE exon 9616 9692 . + . ID=exon-CCO57_RS22425-1;Parent=rna-CCO57_RS22425;anticodon=(pos:9650..9652);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS22425;product=tRNA-Asp NZ_NPMC01000022.1 RefSeq gene 10012 11061 . - . ID=gene-CCO57_RS22430;Name=CCO57_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22430;old_locus_tag=CCO57_22405 NZ_NPMC01000022.1 Protein Homology CDS 10012 11061 . - 0 ID=cds-WP_000367617.1;Parent=gene-CCO57_RS22430;Dbxref=GenBank:WP_000367617.1;Name=WP_000367617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=CCO57_RS22430;product=ImpA family type VI secretion system protein;protein_id=WP_000367617.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 11072 12067 . - . ID=gene-CCO57_RS22435;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=CCO57_RS22435;old_locus_tag=CCO57_22410 NZ_NPMC01000022.1 Protein Homology CDS 11072 12067 . - 0 ID=cds-WP_000145239.1;Parent=gene-CCO57_RS22435;Dbxref=GenBank:WP_000145239.1;Name=WP_000145239.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=CCO57_RS22435;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000145239.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 12064 13947 . - . ID=gene-CCO57_RS22440;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=CCO57_RS22440;old_locus_tag=CCO57_22415 NZ_NPMC01000022.1 Protein Homology CDS 12064 13947 . - 0 ID=cds-WP_094915172.1;Parent=gene-CCO57_RS22440;Dbxref=GenBank:WP_094915172.1;Name=WP_094915172.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=CCO57_RS22440;product=type VI secretion system baseplate subunit TssF;protein_id=WP_094915172.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 13963 14457 . - . ID=gene-CCO57_RS22445;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=CCO57_RS22445;old_locus_tag=CCO57_22420 NZ_NPMC01000022.1 Protein Homology CDS 13963 14457 . - 0 ID=cds-WP_000108007.1;Parent=gene-CCO57_RS22445;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=CCO57_RS22445;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 14454 15278 . - . ID=gene-CCO57_RS22450;Name=CCO57_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22450;old_locus_tag=CCO57_22425 NZ_NPMC01000022.1 Protein Homology CDS 14454 15278 . - 0 ID=cds-WP_061371980.1;Parent=gene-CCO57_RS22450;Dbxref=GenBank:WP_061371980.1;Name=WP_061371980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=CCO57_RS22450;product=type VI secretion system accessory protein TagJ;protein_id=WP_061371980.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 15265 16167 . - . ID=gene-CCO57_RS22455;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=CCO57_RS22455;old_locus_tag=CCO57_22430 NZ_NPMC01000022.1 Protein Homology CDS 15265 16167 . - 0 ID=cds-WP_094915173.1;Parent=gene-CCO57_RS22455;Dbxref=GenBank:WP_094915173.1;Name=WP_094915173.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=CCO57_RS22455;product=type VI secretion system-associated protein TagK;protein_id=WP_094915173.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 16535 19198 . + . ID=gene-CCO57_RS22460;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=CCO57_RS22460;old_locus_tag=CCO57_22435 NZ_NPMC01000022.1 Protein Homology CDS 16535 19198 . + 0 ID=cds-WP_094915174.1;Parent=gene-CCO57_RS22460;Dbxref=GenBank:WP_094915174.1;Name=WP_094915174.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449792.1;locus_tag=CCO57_RS22460;product=type VI secretion system ATPase TssH;protein_id=WP_094915174.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 19284 19574 . + . ID=gene-CCO57_RS22465;Name=CCO57_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22465;old_locus_tag=CCO57_22440 NZ_NPMC01000022.1 Protein Homology CDS 19284 19574 . + 0 ID=cds-WP_000175471.1;Parent=gene-CCO57_RS22465;Dbxref=GenBank:WP_000175471.1;Name=WP_000175471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175185.1;locus_tag=CCO57_RS22465;product=hypothetical protein;protein_id=WP_000175471.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 19636 20178 . + . ID=gene-CCO57_RS22470;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=CCO57_RS22470;old_locus_tag=CCO57_22445 NZ_NPMC01000022.1 Protein Homology CDS 19636 20178 . + 0 ID=cds-WP_000996817.1;Parent=gene-CCO57_RS22470;Dbxref=GenBank:WP_000996817.1;Name=WP_000996817.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=CCO57_RS22470;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996817.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 20202 21710 . + . ID=gene-CCO57_RS22475;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=CCO57_RS22475;old_locus_tag=CCO57_22450 NZ_NPMC01000022.1 Protein Homology CDS 20202 21710 . + 0 ID=cds-WP_000013884.1;Parent=gene-CCO57_RS22475;Dbxref=GenBank:WP_000013884.1;Name=WP_000013884.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=CCO57_RS22475;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013884.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 21725 21883 . + . ID=gene-CCO57_RS22480;Name=CCO57_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22480;old_locus_tag=CCO57_22455 NZ_NPMC01000022.1 Protein Homology CDS 21725 21883 . + 0 ID=cds-WP_001584850.1;Parent=gene-CCO57_RS22480;Dbxref=GenBank:WP_001584850.1;Name=WP_001584850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033857.1;locus_tag=CCO57_RS22480;product=BPSL0067 family protein;protein_id=WP_001584850.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 21896 22342 . + . ID=gene-CCO57_RS22485;Name=CCO57_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22485;old_locus_tag=CCO57_22460 NZ_NPMC01000022.1 Protein Homology CDS 21896 22342 . + 0 ID=cds-WP_001662106.1;Parent=gene-CCO57_RS22485;Dbxref=GenBank:WP_001662106.1;Name=WP_001662106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535435.1;locus_tag=CCO57_RS22485;product=STY0301 family protein;protein_id=WP_001662106.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 22596 23081 . + . ID=gene-CCO57_RS22490;Name=CCO57_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22490;old_locus_tag=CCO57_22465 NZ_NPMC01000022.1 Protein Homology CDS 22596 23081 . + 0 ID=cds-WP_094915175.1;Parent=gene-CCO57_RS22490;Dbxref=GenBank:WP_094915175.1;Name=WP_094915175.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=CCO57_RS22490;product=Hcp family type VI secretion system effector;protein_id=WP_094915175.1;transl_table=11 NZ_NPMC01000022.1 RefSeq pseudogene 23149 23343 . + . ID=gene-CCO57_RS24760;Name=CCO57_RS24760;end_range=23343,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24760;partial=true;pseudo=true NZ_NPMC01000022.1 Protein Homology CDS 23149 23343 . + 0 ID=cds-CCO57_RS24760;Parent=gene-CCO57_RS24760;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23343,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO57_RS24760;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 23386 23871 . + . ID=gene-CCO57_RS22500;Name=CCO57_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22500;old_locus_tag=CCO57_22475 NZ_NPMC01000022.1 Protein Homology CDS 23386 23871 . + 0 ID=cds-WP_001081548.1;Parent=gene-CCO57_RS22500;Dbxref=GenBank:WP_001081548.1;Name=WP_001081548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=CCO57_RS22500;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081548.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 23856 24239 . + . ID=gene-CCO57_RS22505;Name=CCO57_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22505;old_locus_tag=CCO57_22480 NZ_NPMC01000022.1 Protein Homology CDS 23856 24239 . + 0 ID=cds-WP_000379082.1;Parent=gene-CCO57_RS22505;Dbxref=GenBank:WP_000379082.1;Name=WP_000379082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=CCO57_RS22505;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379082.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 24382 24867 . + . ID=gene-CCO57_RS22510;Name=CCO57_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22510;old_locus_tag=CCO57_22485 NZ_NPMC01000022.1 Protein Homology CDS 24382 24867 . + 0 ID=cds-WP_023251615.1;Parent=gene-CCO57_RS22510;Dbxref=GenBank:WP_023251615.1;Name=WP_023251615.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=CCO57_RS22510;product=Hcp family type VI secretion system effector;protein_id=WP_023251615.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 24934 25470 . + . ID=gene-CCO57_RS22515;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=CCO57_RS22515;old_locus_tag=CCO57_22490 NZ_NPMC01000022.1 Protein Homology CDS 24934 25470 . + 0 ID=cds-WP_094915177.1;Parent=gene-CCO57_RS22515;Dbxref=GenBank:WP_094915177.1;Name=WP_094915177.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO57_RS22515;product=type VI secretion system lipoprotein TssJ;protein_id=WP_094915177.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 25474 26817 . + . ID=gene-CCO57_RS22520;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=CCO57_RS22520;old_locus_tag=CCO57_22495 NZ_NPMC01000022.1 Protein Homology CDS 25474 26817 . + 0 ID=cds-WP_000118728.1;Parent=gene-CCO57_RS22520;Dbxref=GenBank:WP_000118728.1;Name=WP_000118728.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=CCO57_RS22520;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118728.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 26814 28118 . + . ID=gene-CCO57_RS22525;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=CCO57_RS22525;old_locus_tag=CCO57_22500 NZ_NPMC01000022.1 Protein Homology CDS 26814 28118 . + 0 ID=cds-WP_000132488.1;Parent=gene-CCO57_RS22525;Dbxref=GenBank:WP_000132488.1;Name=WP_000132488.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=CCO57_RS22525;product=type VI secretion system protein TssL%2C long form;protein_id=WP_000132488.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 28123 28896 . + . ID=gene-CCO57_RS22530;Name=CCO57_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22530;old_locus_tag=CCO57_22505 NZ_NPMC01000022.1 Protein Homology CDS 28123 28896 . + 0 ID=cds-WP_000976551.1;Parent=gene-CCO57_RS22530;Dbxref=GenBank:WP_000976551.1;Name=WP_000976551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=CCO57_RS22530;product=Rap1a/Tai family immunity protein;protein_id=WP_000976551.1;transl_table=11 NZ_NPMC01000022.1 RefSeq pseudogene 29099 29507 . + . ID=gene-CCO57_RS22540;Name=CCO57_RS22540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS22540;old_locus_tag=CCO57_22515;pseudo=true NZ_NPMC01000022.1 Protein Homology CDS 29099 29507 . + 0 ID=cds-CCO57_RS22540;Parent=gene-CCO57_RS22540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=CCO57_RS22540;product=Shiga toxin A subunit;pseudo=true;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 29541 33410 . + . ID=gene-CCO57_RS22545;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=CCO57_RS22545;old_locus_tag=CCO57_22520 NZ_NPMC01000022.1 Protein Homology CDS 29541 33410 . + 0 ID=cds-WP_031564752.1;Parent=gene-CCO57_RS22545;Dbxref=GenBank:WP_031564752.1;Name=WP_031564752.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=CCO57_RS22545;product=Type VI secretion protein IcmF;protein_id=WP_031564752.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 33410 34192 . + . ID=gene-CCO57_RS22550;Name=CCO57_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22550;old_locus_tag=CCO57_22525 NZ_NPMC01000022.1 Protein Homology CDS 33410 34192 . + 0 ID=cds-WP_001254115.1;Parent=gene-CCO57_RS22550;Dbxref=GenBank:WP_001254115.1;Name=WP_001254115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254114.1;locus_tag=CCO57_RS22550;product=TagF domain-containing protein;protein_id=WP_001254115.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 34189 35028 . + . ID=gene-CCO57_RS22555;Name=CCO57_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22555;old_locus_tag=CCO57_22530 NZ_NPMC01000022.1 Protein Homology CDS 34189 35028 . + 0 ID=cds-WP_000654209.1;Parent=gene-CCO57_RS22555;Dbxref=GenBank:WP_000654209.1;Name=WP_000654209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654209.1;locus_tag=CCO57_RS22555;product=hypothetical protein;protein_id=WP_000654209.1;transl_table=11 NZ_NPMC01000022.1 RefSeq pseudogene 35403 36236 . + . ID=gene-CCO57_RS22565;Name=CCO57_RS22565;end_range=36236,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS22565;old_locus_tag=CCO57_22540;partial=true;pseudo=true NZ_NPMC01000022.1 Protein Homology CDS 35403 36236 . + 0 ID=cds-CCO57_RS22565;Parent=gene-CCO57_RS22565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=36236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=CCO57_RS22565;partial=true;product=phage late control D family protein;pseudo=true;transl_table=11 NZ_NPMC01000022.1 RefSeq pseudogene 36224 37558 . + . ID=gene-CCO57_RS22570;Name=CCO57_RS22570;end_range=37558,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS22570;old_locus_tag=CCO57_22545;partial=true;pseudo=true;start_range=.,36224 NZ_NPMC01000022.1 Protein Homology CDS 36224 37558 . + 0 ID=cds-CCO57_RS22570;Parent=gene-CCO57_RS22570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=37558,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO57_RS22570;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,36224;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 37900 38346 . + . ID=gene-CCO57_RS22575;Name=CCO57_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22575;old_locus_tag=CCO57_22550 NZ_NPMC01000022.1 Protein Homology CDS 37900 38346 . + 0 ID=cds-WP_000116458.1;Parent=gene-CCO57_RS22575;Dbxref=GenBank:WP_000116458.1;Name=WP_000116458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116458.1;locus_tag=CCO57_RS22575;product=hypothetical protein;protein_id=WP_000116458.1;transl_table=11 NZ_NPMC01000022.1 RefSeq pseudogene 38699 38785 . + . ID=gene-CCO57_RS25060;Name=CCO57_RS25060;end_range=38785,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25060;partial=true;pseudo=true;start_range=.,38699 NZ_NPMC01000022.1 Protein Homology CDS 38699 38785 . + 0 ID=cds-CCO57_RS25060;Parent=gene-CCO57_RS25060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=38785,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000015242.1;locus_tag=CCO57_RS25060;partial=true;product=hypothetical protein;pseudo=true;start_range=.,38699;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 38910 39188 . + . ID=gene-CCO57_RS22580;Name=CCO57_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22580;old_locus_tag=CCO57_22555 NZ_NPMC01000022.1 Protein Homology CDS 38910 39188 . + 0 ID=cds-WP_012664366.1;Parent=gene-CCO57_RS22580;Dbxref=GenBank:WP_012664366.1;Name=WP_012664366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=CCO57_RS22580;product=hypothetical protein;protein_id=WP_012664366.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 39255 39608 . - . ID=gene-CCO57_RS22585;Name=CCO57_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22585;old_locus_tag=CCO57_22560 NZ_NPMC01000022.1 Protein Homology CDS 39255 39608 . - 0 ID=cds-WP_094915178.1;Parent=gene-CCO57_RS22585;Dbxref=GenBank:WP_094915178.1;Name=WP_094915178.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=CCO57_RS22585;product=SymE family type I addiction module toxin;protein_id=WP_094915178.1;transl_table=11 NZ_NPMC01000022.1 RefSeq pseudogene 39559 39674 . + . ID=gene-CCO57_RS25065;Name=CCO57_RS25065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25065;partial=true;pseudo=true;start_range=.,39559 NZ_NPMC01000022.1 Protein Homology CDS 39559 39674 . + 0 ID=cds-CCO57_RS25065;Parent=gene-CCO57_RS25065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=CCO57_RS25065;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,39559;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 40397 40891 . + . ID=gene-CCO57_RS22590;Name=CCO57_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22590;old_locus_tag=CCO57_22565 NZ_NPMC01000022.1 Protein Homology CDS 40397 40891 . + 0 ID=cds-WP_061377699.1;Parent=gene-CCO57_RS22590;Dbxref=GenBank:WP_061377699.1;Name=WP_061377699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749863.1;locus_tag=CCO57_RS22590;product=pilus assembly protein;protein_id=WP_061377699.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 40975 41712 . + . ID=gene-CCO57_RS22595;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=CCO57_RS22595;old_locus_tag=CCO57_22570 NZ_NPMC01000022.1 Protein Homology CDS 40975 41712 . + 0 ID=cds-WP_001530955.1;Parent=gene-CCO57_RS22595;Dbxref=GenBank:WP_001530955.1;Name=WP_001530955.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=CCO57_RS22595;product=pili assembly chaperone SafB;protein_id=WP_001530955.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 41736 44246 . + . ID=gene-CCO57_RS22600;Name=CCO57_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22600;old_locus_tag=CCO57_22575 NZ_NPMC01000022.1 Protein Homology CDS 41736 44246 . + 0 ID=cds-WP_094915176.1;Parent=gene-CCO57_RS22600;Dbxref=GenBank:WP_094915176.1;Name=WP_094915176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=CCO57_RS22600;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_094915176.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 44268 44738 . + . ID=gene-CCO57_RS22605;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=CCO57_RS22605;old_locus_tag=CCO57_22580 NZ_NPMC01000022.1 Protein Homology CDS 44268 44738 . + 0 ID=cds-WP_000266941.1;Parent=gene-CCO57_RS22605;Dbxref=GenBank:WP_000266941.1;Name=WP_000266941.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=CCO57_RS22605;product=AfaD family invasin;protein_id=WP_000266941.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 45145 45966 . + . ID=gene-CCO57_RS22610;Name=CCO57_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22610;old_locus_tag=CCO57_22585 NZ_NPMC01000022.1 Protein Homology CDS 45145 45966 . + 0 ID=cds-WP_000119391.1;Parent=gene-CCO57_RS22610;Dbxref=GenBank:WP_000119391.1;Name=WP_000119391.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=CCO57_RS22610;product=polysaccharide deacetylase family protein;protein_id=WP_000119391.1;transl_table=11 NZ_NPMC01000022.1 RefSeq pseudogene 46049 46286 . + . ID=gene-CCO57_RS22615;Name=CCO57_RS22615;end_range=46286,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS22615;old_locus_tag=CCO57_22590;partial=true;pseudo=true NZ_NPMC01000022.1 Protein Homology CDS 46049 46286 . + 0 ID=cds-CCO57_RS22615;Parent=gene-CCO57_RS22615;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=46286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=CCO57_RS22615;partial=true;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 46783 47730 . + . ID=gene-CCO57_RS22620;Name=CCO57_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22620;old_locus_tag=CCO57_22595 NZ_NPMC01000022.1 Protein Homology CDS 46783 47730 . + 0 ID=cds-WP_000970302.1;Parent=gene-CCO57_RS22620;Dbxref=GenBank:WP_000970302.1;Name=WP_000970302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=CCO57_RS22620;product=LysR family transcriptional regulator;protein_id=WP_000970302.1;transl_table=11 NZ_NPMC01000022.1 RefSeq pseudogene 47850 47969 . + . ID=gene-CCO57_RS22625;Name=CCO57_RS22625;end_range=47969,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS22625;old_locus_tag=CCO57_22600;partial=true;pseudo=true NZ_NPMC01000022.1 Protein Homology CDS 47850 47969 . + 0 ID=cds-CCO57_RS22625;Parent=gene-CCO57_RS22625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=47969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=CCO57_RS22625;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000022.1 RefSeq pseudogene 48050 48211 . + . ID=gene-CCO57_RS22630;Name=CCO57_RS22630;end_range=48211,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS22630;old_locus_tag=CCO57_22605;partial=true;pseudo=true NZ_NPMC01000022.1 Protein Homology CDS 48050 48211 . + 0 ID=cds-CCO57_RS22630;Parent=gene-CCO57_RS22630;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=48211,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=CCO57_RS22630;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPMC01000022.1 RefSeq pseudogene 48276 48866 . - . ID=gene-CCO57_RS22635;Name=CCO57_RS22635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS22635;old_locus_tag=CCO57_22610;pseudo=true NZ_NPMC01000022.1 Protein Homology CDS 48276 48866 . - 0 ID=cds-CCO57_RS22635;Parent=gene-CCO57_RS22635;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.6;locus_tag=CCO57_RS22635;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 48825 49055 . + . ID=gene-CCO57_RS24765;Name=CCO57_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24765 NZ_NPMC01000022.1 GeneMarkS-2+ CDS 48825 49055 . + 0 ID=cds-WP_000564356.1;Parent=gene-CCO57_RS24765;Dbxref=GenBank:WP_000564356.1;Name=WP_000564356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24765;product=hypothetical protein;protein_id=WP_000564356.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 49869 50579 . + . ID=gene-CCO57_RS22645;Name=tcfA;gbkey=Gene;gene=tcfA;gene_biotype=protein_coding;locus_tag=CCO57_RS22645;old_locus_tag=CCO57_22620 NZ_NPMC01000022.1 Protein Homology CDS 49869 50579 . + 0 ID=cds-WP_001009507.1;Parent=gene-CCO57_RS22645;Dbxref=GenBank:WP_001009507.1;Name=WP_001009507.1;gbkey=CDS;gene=tcfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009503.1;locus_tag=CCO57_RS22645;product=fimbrial chaperone TcfA;protein_id=WP_001009507.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 50630 51205 . + . ID=gene-CCO57_RS22650;Name=tcfB;gbkey=Gene;gene=tcfB;gene_biotype=protein_coding;locus_tag=CCO57_RS22650;old_locus_tag=CCO57_22625 NZ_NPMC01000022.1 Protein Homology CDS 50630 51205 . + 0 ID=cds-WP_000287812.1;Parent=gene-CCO57_RS22650;Dbxref=GenBank:WP_000287812.1;Name=WP_000287812.1;gbkey=CDS;gene=tcfB;inference=COORDINATES: protein motif:HMM:NF011837.0;locus_tag=CCO57_RS22650;product=fimbrial protein TcfB;protein_id=WP_000287812.1;transl_table=11 NZ_NPMC01000022.1 RefSeq gene 51314 53570 . + . ID=gene-CCO57_RS22655;Name=tcfC;end_range=53570,.;gbkey=Gene;gene=tcfC;gene_biotype=protein_coding;locus_tag=CCO57_RS22655;old_locus_tag=CCO57_22630;partial=true NZ_NPMC01000022.1 Protein Homology CDS 51314 53570 . + 0 ID=cds-WP_094888752.1;Parent=gene-CCO57_RS22655;Dbxref=GenBank:WP_094888752.1;Name=WP_094888752.1;end_range=53570,.;gbkey=CDS;gene=tcfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092509.1;locus_tag=CCO57_RS22655;partial=true;product=fimbrial outer membrane usher protein TcfC;protein_id=WP_094888752.1;transl_table=11 ##sequence-region NZ_NPMC01000023.1 1 44795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000023.1 RefSeq region 1 44795 . + . ID=NZ_NPMC01000023.1:1..44795;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000023.1 RefSeq gene 282 1625 . - . ID=gene-CCO57_RS22660;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=CCO57_RS22660;old_locus_tag=CCO57_22635 NZ_NPMC01000023.1 Protein Homology CDS 282 1625 . - 0 ID=cds-WP_000207653.1;Parent=gene-CCO57_RS22660;Dbxref=GenBank:WP_000207653.1;Name=WP_000207653.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=CCO57_RS22660;product=argininosuccinate synthase;protein_id=WP_000207653.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 1969 2045 . + . ID=gene-CCO57_RS22665;Name=CCO57_RS22665;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS22665;old_locus_tag=CCO57_22640 NZ_NPMC01000023.1 tRNAscan-SE tRNA 1969 2045 . + . ID=rna-CCO57_RS22665;Parent=gene-CCO57_RS22665;anticodon=(pos:2003..2005);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS22665;product=tRNA-Met NZ_NPMC01000023.1 tRNAscan-SE exon 1969 2045 . + . ID=exon-CCO57_RS22665-1;Parent=rna-CCO57_RS22665;anticodon=(pos:2003..2005);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS22665;product=tRNA-Met NZ_NPMC01000023.1 RefSeq gene 2253 2705 . + . ID=gene-CCO57_RS22670;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CCO57_RS22670;old_locus_tag=CCO57_22645 NZ_NPMC01000023.1 Protein Homology CDS 2253 2705 . + 0 ID=cds-WP_000105461.1;Parent=gene-CCO57_RS22670;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=CCO57_RS22670;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 2733 4235 . + . ID=gene-CCO57_RS22675;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CCO57_RS22675;old_locus_tag=CCO57_22650 NZ_NPMC01000023.1 Protein Homology CDS 2733 4235 . + 0 ID=cds-WP_001031038.1;Parent=gene-CCO57_RS22675;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=CCO57_RS22675;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 4260 6938 . + . ID=gene-CCO57_RS22680;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CCO57_RS22680;old_locus_tag=CCO57_22655 NZ_NPMC01000023.1 Protein Homology CDS 4260 6938 . + 0 ID=cds-WP_000133064.1;Parent=gene-CCO57_RS22680;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=CCO57_RS22680;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 7159 7560 . + . ID=gene-CCO57_RS22685;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CCO57_RS22685;old_locus_tag=CCO57_22660 NZ_NPMC01000023.1 Protein Homology CDS 7159 7560 . + 0 ID=cds-WP_001040208.1;Parent=gene-CCO57_RS22685;Dbxref=GenBank:WP_001040208.1;Name=WP_001040208.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=CCO57_RS22685;product=30S ribosome-binding factor RbfA;protein_id=WP_001040208.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 7560 8504 . + . ID=gene-CCO57_RS22690;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CCO57_RS22690;old_locus_tag=CCO57_22665 NZ_NPMC01000023.1 Protein Homology CDS 7560 8504 . + 0 ID=cds-WP_023137152.1;Parent=gene-CCO57_RS22690;Dbxref=GenBank:WP_023137152.1;Name=WP_023137152.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=CCO57_RS22690;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_023137152.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 8655 8924 . + . ID=gene-CCO57_RS22695;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CCO57_RS22695;old_locus_tag=CCO57_22670 NZ_NPMC01000023.1 Protein Homology CDS 8655 8924 . + 0 ID=cds-WP_000059465.1;Parent=gene-CCO57_RS22695;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=CCO57_RS22695;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 9166 11301 . + . ID=gene-CCO57_RS22700;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CCO57_RS22700;old_locus_tag=CCO57_22675 NZ_NPMC01000023.1 Protein Homology CDS 9166 11301 . + 0 ID=cds-WP_001670767.1;Parent=gene-CCO57_RS22700;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=CCO57_RS22700;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 11411 12295 . + . ID=gene-CCO57_RS22705;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=CCO57_RS22705;old_locus_tag=CCO57_22680 NZ_NPMC01000023.1 Protein Homology CDS 11411 12295 . + 0 ID=cds-WP_000802069.1;Parent=gene-CCO57_RS22705;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=CCO57_RS22705;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 12401 12481 . + . ID=gene-CCO57_RS24255;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=CCO57_RS24255 NZ_NPMC01000023.1 Protein Homology CDS 12401 12481 . + 0 ID=cds-WP_010723222.1;Parent=gene-CCO57_RS24255;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=CCO57_RS24255;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 12474 14363 . + . ID=gene-CCO57_RS22710;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=CCO57_RS22710;old_locus_tag=CCO57_22685 NZ_NPMC01000023.1 Protein Homology CDS 12474 14363 . + 0 ID=cds-WP_000807248.1;Parent=gene-CCO57_RS22710;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=CCO57_RS22710;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 14517 15761 . + . ID=gene-CCO57_RS22715;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=CCO57_RS22715;old_locus_tag=CCO57_22690 NZ_NPMC01000023.1 Protein Homology CDS 14517 15761 . + 0 ID=cds-WP_000224374.1;Parent=gene-CCO57_RS22715;Dbxref=GenBank:WP_000224374.1;Name=WP_000224374.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=CCO57_RS22715;product=tryptophan permease;protein_id=WP_000224374.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 15852 16859 . - . ID=gene-CCO57_RS22720;Name=CCO57_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22720;old_locus_tag=CCO57_22695 NZ_NPMC01000023.1 Protein Homology CDS 15852 16859 . - 0 ID=cds-WP_000130432.1;Parent=gene-CCO57_RS22720;Dbxref=GenBank:WP_000130432.1;Name=WP_000130432.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=CCO57_RS22720;product=luciferase-like monooxygenase;protein_id=WP_000130432.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 17036 17914 . - . ID=gene-CCO57_RS22725;Name=CCO57_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22725;old_locus_tag=CCO57_22700 NZ_NPMC01000023.1 Protein Homology CDS 17036 17914 . - 0 ID=cds-WP_000877716.1;Parent=gene-CCO57_RS22725;Dbxref=GenBank:WP_000877716.1;Name=WP_000877716.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=CCO57_RS22725;product=U32 family peptidase;protein_id=WP_000877716.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 17923 18918 . - . ID=gene-CCO57_RS22730;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=CCO57_RS22730;old_locus_tag=CCO57_22705 NZ_NPMC01000023.1 Protein Homology CDS 17923 18918 . - 0 ID=cds-WP_000421309.1;Parent=gene-CCO57_RS22730;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=CCO57_RS22730;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 19135 19659 . + . ID=gene-CCO57_RS22735;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=CCO57_RS22735;old_locus_tag=CCO57_22710 NZ_NPMC01000023.1 Protein Homology CDS 19135 19659 . + 0 ID=cds-WP_000884721.1;Parent=gene-CCO57_RS22735;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=CCO57_RS22735;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 19653 20156 . + . ID=gene-CCO57_RS22740;Name=CCO57_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22740;old_locus_tag=CCO57_22715 NZ_NPMC01000023.1 Protein Homology CDS 19653 20156 . + 0 ID=cds-WP_000908567.1;Parent=gene-CCO57_RS22740;Dbxref=GenBank:WP_000908567.1;Name=WP_000908567.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=CCO57_RS22740;product=GNAT family N-acetyltransferase;protein_id=WP_000908567.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 20143 20460 . - . ID=gene-CCO57_RS22745;Name=CCO57_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22745;old_locus_tag=CCO57_22720 NZ_NPMC01000023.1 Protein Homology CDS 20143 20460 . - 0 ID=cds-WP_094915179.1;Parent=gene-CCO57_RS22745;Dbxref=GenBank:WP_094915179.1;Name=WP_094915179.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=CCO57_RS22745;product=GIY-YIG nuclease family protein;protein_id=WP_094915179.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 20498 20941 . + . ID=gene-CCO57_RS22750;Name=CCO57_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22750;old_locus_tag=CCO57_22725 NZ_NPMC01000023.1 Protein Homology CDS 20498 20941 . + 0 ID=cds-WP_000380407.1;Parent=gene-CCO57_RS22750;Dbxref=GenBank:WP_000380407.1;Name=WP_000380407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=CCO57_RS22750;product=YhbP family protein;protein_id=WP_000380407.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 20921 21439 . - . ID=gene-CCO57_RS22755;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=CCO57_RS22755;old_locus_tag=CCO57_22730 NZ_NPMC01000023.1 Protein Homology CDS 20921 21439 . - 0 ID=cds-WP_000037599.1;Parent=gene-CCO57_RS22755;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=CCO57_RS22755;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 21570 22205 . + . ID=gene-CCO57_RS22760;Name=CCO57_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22760;old_locus_tag=CCO57_22735 NZ_NPMC01000023.1 Protein Homology CDS 21570 22205 . + 0 ID=cds-WP_094915180.1;Parent=gene-CCO57_RS22760;Dbxref=GenBank:WP_094915180.1;Name=WP_094915180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=CCO57_RS22760;product=NAD(P)H-binding protein;protein_id=WP_094915180.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 22272 22847 . - . ID=gene-CCO57_RS22765;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=CCO57_RS22765;old_locus_tag=CCO57_22740 NZ_NPMC01000023.1 Protein Homology CDS 22272 22847 . - 0 ID=cds-WP_000643280.1;Parent=gene-CCO57_RS22765;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=CCO57_RS22765;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 22857 23447 . - . ID=gene-CCO57_RS22770;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=CCO57_RS22770;old_locus_tag=CCO57_22745 NZ_NPMC01000023.1 Protein Homology CDS 22857 23447 . - 0 ID=cds-WP_000893481.1;Parent=gene-CCO57_RS22770;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=CCO57_RS22770;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 23469 23864 . - . ID=gene-CCO57_RS22775;Name=CCO57_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22775;old_locus_tag=CCO57_22750 NZ_NPMC01000023.1 Protein Homology CDS 23469 23864 . - 0 ID=cds-WP_000057285.1;Parent=gene-CCO57_RS22775;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=CCO57_RS22775;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 23822 25864 . - . ID=gene-CCO57_RS22780;Name=CCO57_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22780;old_locus_tag=CCO57_22755 NZ_NPMC01000023.1 Protein Homology CDS 23822 25864 . - 0 ID=cds-WP_094915181.1;Parent=gene-CCO57_RS22780;Dbxref=GenBank:WP_094915181.1;Name=WP_094915181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=CCO57_RS22780;product=penicillin-binding protein activator;protein_id=WP_094915181.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 25928 26791 . + . ID=gene-CCO57_RS22785;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CCO57_RS22785;old_locus_tag=CCO57_22760 NZ_NPMC01000023.1 Protein Homology CDS 25928 26791 . + 0 ID=cds-WP_094915182.1;Parent=gene-CCO57_RS22785;Dbxref=GenBank:WP_094915182.1;Name=WP_094915182.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=CCO57_RS22785;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_094915182.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 26949 27722 . - . ID=gene-CCO57_RS22790;Name=CCO57_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22790;old_locus_tag=CCO57_22765 NZ_NPMC01000023.1 Protein Homology CDS 26949 27722 . - 0 ID=cds-WP_001083899.1;Parent=gene-CCO57_RS22790;Dbxref=GenBank:WP_001083899.1;Name=WP_001083899.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=CCO57_RS22790;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083899.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 27833 28876 . - . ID=gene-CCO57_RS22795;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CCO57_RS22795;old_locus_tag=CCO57_22770 NZ_NPMC01000023.1 Protein Homology CDS 27833 28876 . - 0 ID=cds-WP_000844174.1;Parent=gene-CCO57_RS22795;Dbxref=GenBank:WP_000844174.1;Name=WP_000844174.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=CCO57_RS22795;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844174.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 28920 30293 . - . ID=gene-CCO57_RS22800;Name=CCO57_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22800;old_locus_tag=CCO57_22775 NZ_NPMC01000023.1 Protein Homology CDS 28920 30293 . - 0 ID=cds-WP_060647192.1;Parent=gene-CCO57_RS22800;Dbxref=GenBank:WP_060647192.1;Name=WP_060647192.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=CCO57_RS22800;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_060647192.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 30297 30581 . - . ID=gene-CCO57_RS22805;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CCO57_RS22805;old_locus_tag=CCO57_22780 NZ_NPMC01000023.1 Protein Homology CDS 30297 30581 . - 0 ID=cds-WP_000824293.1;Parent=gene-CCO57_RS22805;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=CCO57_RS22805;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 30612 31076 . - . ID=gene-CCO57_RS22810;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CCO57_RS22810;old_locus_tag=CCO57_22785 NZ_NPMC01000023.1 Protein Homology CDS 30612 31076 . - 0 ID=cds-WP_000080444.1;Parent=gene-CCO57_RS22810;Dbxref=GenBank:WP_000080444.1;Name=WP_000080444.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=CCO57_RS22810;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080444.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 31091 32362 . - . ID=gene-CCO57_RS22815;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=CCO57_RS22815;old_locus_tag=CCO57_22790 NZ_NPMC01000023.1 Protein Homology CDS 31091 32362 . - 0 ID=cds-WP_094915183.1;Parent=gene-CCO57_RS22815;Dbxref=GenBank:WP_094915183.1;Name=WP_094915183.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=CCO57_RS22815;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_094915183.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 32560 33366 . - . ID=gene-CCO57_RS22820;Name=CCO57_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22820;old_locus_tag=CCO57_22795 NZ_NPMC01000023.1 Protein Homology CDS 32560 33366 . - 0 ID=cds-WP_001175244.1;Parent=gene-CCO57_RS22820;Dbxref=GenBank:WP_001175244.1;Name=WP_001175244.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462169.1;locus_tag=CCO57_RS22820;product=HPr family phosphocarrier protein;protein_id=WP_001175244.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 33353 34780 . - . ID=gene-CCO57_RS22825;Name=CCO57_RS22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22825;old_locus_tag=CCO57_22800 NZ_NPMC01000023.1 Protein Homology CDS 33353 34780 . - 0 ID=cds-WP_000719914.1;Parent=gene-CCO57_RS22825;Dbxref=GenBank:WP_000719914.1;Name=WP_000719914.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462168.1;locus_tag=CCO57_RS22825;product=PTS fructose transporter subunit IIC;protein_id=WP_000719914.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 34807 35721 . - . ID=gene-CCO57_RS22830;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO57_RS22830;old_locus_tag=CCO57_22805 NZ_NPMC01000023.1 Protein Homology CDS 34807 35721 . - 0 ID=cds-WP_000640685.1;Parent=gene-CCO57_RS22830;Dbxref=GenBank:WP_000640685.1;Name=WP_000640685.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462167.1;locus_tag=CCO57_RS22830;product=1-phosphofructokinase;protein_id=WP_000640685.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 35732 36586 . - . ID=gene-CCO57_RS22835;Name=CCO57_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22835;old_locus_tag=CCO57_22810 NZ_NPMC01000023.1 Protein Homology CDS 35732 36586 . - 0 ID=cds-WP_000469985.1;Parent=gene-CCO57_RS22835;Dbxref=GenBank:WP_000469985.1;Name=WP_000469985.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=CCO57_RS22835;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469985.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 36920 37753 . + . ID=gene-CCO57_RS22840;Name=CCO57_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22840;old_locus_tag=CCO57_22815 NZ_NPMC01000023.1 Protein Homology CDS 36920 37753 . + 0 ID=cds-WP_058111632.1;Parent=gene-CCO57_RS22840;Dbxref=GenBank:WP_058111632.1;Name=WP_058111632.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462165.1;locus_tag=CCO57_RS22840;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_058111632.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 37764 38711 . + . ID=gene-CCO57_RS22845;Name=CCO57_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22845;old_locus_tag=CCO57_22820 NZ_NPMC01000023.1 Protein Homology CDS 37764 38711 . + 0 ID=cds-WP_001027806.1;Parent=gene-CCO57_RS22845;Dbxref=GenBank:WP_001027806.1;Name=WP_001027806.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462164.1;locus_tag=CCO57_RS22845;product=sugar kinase;protein_id=WP_001027806.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 38951 40522 . - . ID=gene-CCO57_RS22850;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=CCO57_RS22850;old_locus_tag=CCO57_22825 NZ_NPMC01000023.1 Protein Homology CDS 38951 40522 . - 0 ID=cds-WP_001273723.1;Parent=gene-CCO57_RS22850;Dbxref=GenBank:WP_001273723.1;Name=WP_001273723.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=CCO57_RS22850;product=galactarate dehydratase;protein_id=WP_001273723.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 41052 41822 . + . ID=gene-CCO57_RS22855;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=CCO57_RS22855;old_locus_tag=CCO57_22830 NZ_NPMC01000023.1 Protein Homology CDS 41052 41822 . + 0 ID=cds-WP_001057715.1;Parent=gene-CCO57_RS22855;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=CCO57_RS22855;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 41848 42738 . + . ID=gene-CCO57_RS22860;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=CCO57_RS22860;old_locus_tag=CCO57_22835 NZ_NPMC01000023.1 Protein Homology CDS 41848 42738 . + 0 ID=cds-WP_094915184.1;Parent=gene-CCO57_RS22860;Dbxref=GenBank:WP_094915184.1;Name=WP_094915184.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=CCO57_RS22860;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_094915184.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 42836 43981 . + . ID=gene-CCO57_RS22865;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=CCO57_RS22865;old_locus_tag=CCO57_22840 NZ_NPMC01000023.1 Protein Homology CDS 42836 43981 . + 0 ID=cds-WP_000706464.1;Parent=gene-CCO57_RS22865;Dbxref=GenBank:WP_000706464.1;Name=WP_000706464.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=CCO57_RS22865;product=glycerate 2-kinase;protein_id=WP_000706464.1;transl_table=11 NZ_NPMC01000023.1 RefSeq gene 44014 44388 . + . ID=gene-CCO57_RS22870;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CCO57_RS22870;old_locus_tag=CCO57_22845 NZ_NPMC01000023.1 cmsearch RNase_P_RNA 44014 44388 . + . ID=rna-CCO57_RS22870;Parent=gene-CCO57_RS22870;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS22870;product=RNase P RNA component class A NZ_NPMC01000023.1 cmsearch exon 44014 44388 . + . ID=exon-CCO57_RS22870-1;Parent=rna-CCO57_RS22870;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS22870;product=RNase P RNA component class A NZ_NPMC01000023.1 RefSeq gene 44607 44795 . - . ID=gene-CCO57_RS24770;Name=CCO57_RS24770;end_range=44795,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24770;old_locus_tag=CCO57_22850;partial=true NZ_NPMC01000023.1 GeneMarkS-2+ CDS 44607 44795 . - 0 ID=cds-WP_237143030.1;Parent=gene-CCO57_RS24770;Dbxref=GenBank:WP_237143030.1;Name=WP_237143030.1;end_range=44795,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24770;partial=true;product=hypothetical protein;protein_id=WP_237143030.1;transl_table=11 ##sequence-region NZ_NPMC01000024.1 1 41849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000024.1 RefSeq region 1 41849 . + . ID=NZ_NPMC01000024.1:1..41849;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000024.1 RefSeq gene 193 1164 . - . ID=gene-CCO57_RS22880;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=CCO57_RS22880;old_locus_tag=CCO57_22855 NZ_NPMC01000024.1 Protein Homology CDS 193 1164 . - 0 ID=cds-WP_094915185.1;Parent=gene-CCO57_RS22880;Dbxref=GenBank:WP_094915185.1;Name=WP_094915185.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=CCO57_RS22880;product=protein translocase subunit SecF;protein_id=WP_094915185.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 1175 3022 . - . ID=gene-CCO57_RS22885;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=CCO57_RS22885;old_locus_tag=CCO57_22860 NZ_NPMC01000024.1 Protein Homology CDS 1175 3022 . - 0 ID=cds-WP_000934811.1;Parent=gene-CCO57_RS22885;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=CCO57_RS22885;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 3050 3382 . - . ID=gene-CCO57_RS22890;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CCO57_RS22890;old_locus_tag=CCO57_22865 NZ_NPMC01000024.1 Protein Homology CDS 3050 3382 . - 0 ID=cds-WP_000007628.1;Parent=gene-CCO57_RS22890;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=CCO57_RS22890;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 3405 4532 . - . ID=gene-CCO57_RS22895;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CCO57_RS22895;old_locus_tag=CCO57_22870 NZ_NPMC01000024.1 Protein Homology CDS 3405 4532 . - 0 ID=cds-WP_000667305.1;Parent=gene-CCO57_RS22895;Dbxref=GenBank:WP_000667305.1;Name=WP_000667305.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=CCO57_RS22895;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667305.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 4729 5793 . - . ID=gene-CCO57_RS22905;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CCO57_RS22905;old_locus_tag=CCO57_22880 NZ_NPMC01000024.1 Protein Homology CDS 4729 5793 . - 0 ID=cds-WP_001266530.1;Parent=gene-CCO57_RS22905;Dbxref=GenBank:WP_001266530.1;Name=WP_001266530.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=CCO57_RS22905;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266530.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 5887 6468 . + . ID=gene-CCO57_RS22910;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=CCO57_RS22910;old_locus_tag=CCO57_22885 NZ_NPMC01000024.1 Protein Homology CDS 5887 6468 . + 0 ID=cds-WP_094915186.1;Parent=gene-CCO57_RS22910;Dbxref=GenBank:WP_094915186.1;Name=WP_094915186.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=CCO57_RS22910;product=ACP phosphodiesterase;protein_id=WP_094915186.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 6678 7280 . + . ID=gene-CCO57_RS22915;Name=CCO57_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22915;old_locus_tag=CCO57_22890 NZ_NPMC01000024.1 Protein Homology CDS 6678 7280 . + 0 ID=cds-WP_000244731.1;Parent=gene-CCO57_RS22915;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=CCO57_RS22915;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 7352 9169 . - . ID=gene-CCO57_RS22920;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=CCO57_RS22920;old_locus_tag=CCO57_22895 NZ_NPMC01000024.1 Protein Homology CDS 7352 9169 . - 0 ID=cds-WP_094915187.1;Parent=gene-CCO57_RS22920;Dbxref=GenBank:WP_094915187.1;Name=WP_094915187.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=CCO57_RS22920;product=maltodextrin glucosidase;protein_id=WP_094915187.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 9331 10701 . - . ID=gene-CCO57_RS22925;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=CCO57_RS22925;old_locus_tag=CCO57_22900 NZ_NPMC01000024.1 Protein Homology CDS 9331 10701 . - 0 ID=cds-WP_001555879.1;Parent=gene-CCO57_RS22925;Dbxref=GenBank:WP_001555879.1;Name=WP_001555879.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=CCO57_RS22925;product=proline-specific permease ProY;protein_id=WP_001555879.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 10776 12095 . - . ID=gene-CCO57_RS22930;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CCO57_RS22930;old_locus_tag=CCO57_22905 NZ_NPMC01000024.1 Protein Homology CDS 10776 12095 . - 0 ID=cds-WP_000149625.1;Parent=gene-CCO57_RS22930;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=CCO57_RS22930;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 12504 13799 . - . ID=gene-CCO57_RS22935;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=CCO57_RS22935;old_locus_tag=CCO57_22910 NZ_NPMC01000024.1 Protein Homology CDS 12504 13799 . - 0 ID=cds-WP_000893642.1;Parent=gene-CCO57_RS22935;Dbxref=GenBank:WP_000893642.1;Name=WP_000893642.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=CCO57_RS22935;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893642.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 13869 14558 . - . ID=gene-CCO57_RS22940;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=CCO57_RS22940;old_locus_tag=CCO57_22915 NZ_NPMC01000024.1 Protein Homology CDS 13869 14558 . - 0 ID=cds-WP_000113921.1;Parent=gene-CCO57_RS22940;Dbxref=GenBank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=CCO57_RS22940;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 14772 15974 . + . ID=gene-CCO57_RS22945;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CCO57_RS22945;old_locus_tag=CCO57_22920 NZ_NPMC01000024.1 Protein Homology CDS 14772 15974 . + 0 ID=cds-WP_001221249.1;Parent=gene-CCO57_RS22945;Dbxref=GenBank:WP_001221249.1;Name=WP_001221249.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=CCO57_RS22945;product=exonuclease subunit SbcD;protein_id=WP_001221249.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 15971 19111 . + . ID=gene-CCO57_RS22950;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CCO57_RS22950;old_locus_tag=CCO57_22925 NZ_NPMC01000024.1 Protein Homology CDS 15971 19111 . + 0 ID=cds-WP_023136985.1;Parent=gene-CCO57_RS22950;Dbxref=GenBank:WP_023136985.1;Name=WP_023136985.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=CCO57_RS22950;product=exonuclease subunit SbcC;protein_id=WP_023136985.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 19284 20456 . + . ID=gene-CCO57_RS22955;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=CCO57_RS22955;old_locus_tag=CCO57_22930 NZ_NPMC01000024.1 Protein Homology CDS 19284 20456 . + 0 ID=cds-WP_000755629.1;Parent=gene-CCO57_RS22955;Dbxref=GenBank:WP_000755629.1;Name=WP_000755629.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=CCO57_RS22955;product=MFS transporter AraJ;protein_id=WP_000755629.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 20476 21384 . - . ID=gene-CCO57_RS22960;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=CCO57_RS22960;old_locus_tag=CCO57_22935 NZ_NPMC01000024.1 Protein Homology CDS 20476 21384 . - 0 ID=cds-WP_001219270.1;Parent=gene-CCO57_RS22960;Dbxref=GenBank:WP_001219270.1;Name=WP_001219270.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=CCO57_RS22960;product=fructokinase;protein_id=WP_001219270.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 21510 22421 . + . ID=gene-CCO57_RS22965;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=CCO57_RS22965;old_locus_tag=CCO57_22940 NZ_NPMC01000024.1 Protein Homology CDS 21510 22421 . + 0 ID=cds-WP_000964307.1;Parent=gene-CCO57_RS22965;Dbxref=GenBank:WP_000964307.1;Name=WP_000964307.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=CCO57_RS22965;product=recombination-associated protein RdgC;protein_id=WP_000964307.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 22459 22743 . - . ID=gene-CCO57_RS22970;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=CCO57_RS22970;old_locus_tag=CCO57_22945 NZ_NPMC01000024.1 Protein Homology CDS 22459 22743 . - 0 ID=cds-WP_094915188.1;Parent=gene-CCO57_RS22970;Dbxref=GenBank:WP_094915188.1;Name=WP_094915188.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=CCO57_RS22970;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_094915188.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 22814 23491 . - . ID=gene-CCO57_RS22975;Name=CCO57_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22975;old_locus_tag=CCO57_22950 NZ_NPMC01000024.1 Protein Homology CDS 22814 23491 . - 0 ID=cds-WP_001276437.1;Parent=gene-CCO57_RS22975;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=CCO57_RS22975;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 23742 23933 . - . ID=gene-CCO57_RS22980;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=CCO57_RS22980;old_locus_tag=CCO57_22955 NZ_NPMC01000024.1 Protein Homology CDS 23742 23933 . - 0 ID=cds-WP_001143161.1;Parent=gene-CCO57_RS22980;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=CCO57_RS22980;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 23960 24505 . - . ID=gene-CCO57_RS22985;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=CCO57_RS22985;old_locus_tag=CCO57_22960 NZ_NPMC01000024.1 Protein Homology CDS 23960 24505 . - 0 ID=cds-WP_094915189.1;Parent=gene-CCO57_RS22985;Dbxref=GenBank:WP_094915189.1;Name=WP_094915189.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=CCO57_RS22985;product=shikimate kinase AroL;protein_id=WP_094915189.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 24690 25145 . - . ID=gene-CCO57_RS22990;Name=CCO57_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS22990;old_locus_tag=CCO57_22965 NZ_NPMC01000024.1 Protein Homology CDS 24690 25145 . - 0 ID=cds-WP_000158137.1;Parent=gene-CCO57_RS22990;Dbxref=GenBank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=CCO57_RS22990;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 25285 26094 . + . ID=gene-CCO57_RS22995;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CCO57_RS22995;old_locus_tag=CCO57_22970 NZ_NPMC01000024.1 Protein Homology CDS 25285 26094 . + 0 ID=cds-WP_000412193.1;Parent=gene-CCO57_RS22995;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=CCO57_RS22995;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 26109 27221 . - . ID=gene-CCO57_RS23000;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=CCO57_RS23000;old_locus_tag=CCO57_22975 NZ_NPMC01000024.1 Protein Homology CDS 26109 27221 . - 0 ID=cds-WP_001632589.1;Parent=gene-CCO57_RS23000;Dbxref=GenBank:WP_001632589.1;Name=WP_001632589.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=CCO57_RS23000;product=diguanylate cyclase AdrA;protein_id=WP_001632589.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 27313 27633 . - . ID=gene-CCO57_RS23005;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=CCO57_RS23005;old_locus_tag=CCO57_22980 NZ_NPMC01000024.1 Protein Homology CDS 27313 27633 . - 0 ID=cds-WP_000705162.1;Parent=gene-CCO57_RS23005;Dbxref=GenBank:WP_000705162.1;Name=WP_000705162.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=CCO57_RS23005;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705162.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 27986 28246 . - . ID=gene-CCO57_RS23015;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=CCO57_RS23015;old_locus_tag=CCO57_22990 NZ_NPMC01000024.1 Protein Homology CDS 27986 28246 . - 0 ID=cds-WP_001518423.1;Parent=gene-CCO57_RS23015;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=CCO57_RS23015;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 28543 29754 . - . ID=gene-CCO57_RS23020;Name=CCO57_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23020;old_locus_tag=CCO57_22995 NZ_NPMC01000024.1 Protein Homology CDS 28543 29754 . - 0 ID=cds-WP_000446772.1;Parent=gene-CCO57_RS23020;Dbxref=GenBank:WP_000446772.1;Name=WP_000446772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=CCO57_RS23020;product=multidrug efflux MFS transporter;protein_id=WP_000446772.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 29923 30636 . - . ID=gene-CCO57_RS23025;Name=CCO57_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23025;old_locus_tag=CCO57_23000 NZ_NPMC01000024.1 Protein Homology CDS 29923 30636 . - 0 ID=cds-WP_000480786.1;Parent=gene-CCO57_RS23025;Dbxref=GenBank:WP_000480786.1;Name=WP_000480786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=CCO57_RS23025;product=extensin family protein;protein_id=WP_000480786.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 30714 31808 . + . ID=gene-CCO57_RS23030;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=CCO57_RS23030;old_locus_tag=CCO57_23005 NZ_NPMC01000024.1 Protein Homology CDS 30714 31808 . + 0 ID=cds-WP_001096588.1;Parent=gene-CCO57_RS23030;Dbxref=GenBank:WP_001096588.1;Name=WP_001096588.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=CCO57_RS23030;product=D-alanine--D-alanine ligase;protein_id=WP_001096588.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 31834 32049 . - . ID=gene-CCO57_RS23035;Name=CCO57_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23035;old_locus_tag=CCO57_23010 NZ_NPMC01000024.1 Protein Homology CDS 31834 32049 . - 0 ID=cds-WP_001239240.1;Parent=gene-CCO57_RS23035;Dbxref=GenBank:WP_001239240.1;Name=WP_001239240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=CCO57_RS23035;product=DUF2754 family protein;protein_id=WP_001239240.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 32317 32625 . + . ID=gene-CCO57_RS23040;Name=CCO57_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23040;old_locus_tag=CCO57_23015 NZ_NPMC01000024.1 Protein Homology CDS 32317 32625 . + 0 ID=cds-WP_000763139.1;Parent=gene-CCO57_RS23040;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=CCO57_RS23040;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 32663 33757 . - . ID=gene-CCO57_RS23045;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=CCO57_RS23045;old_locus_tag=CCO57_23020 NZ_NPMC01000024.1 Protein Homology CDS 32663 33757 . - 0 ID=cds-WP_001271421.1;Parent=gene-CCO57_RS23045;Dbxref=GenBank:WP_001271421.1;Name=WP_001271421.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=CCO57_RS23045;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271421.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 33772 34992 . - . ID=gene-CCO57_RS23050;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=CCO57_RS23050;old_locus_tag=CCO57_23025 NZ_NPMC01000024.1 Protein Homology CDS 33772 34992 . - 0 ID=cds-WP_000477023.1;Parent=gene-CCO57_RS23050;Dbxref=GenBank:WP_000477023.1;Name=WP_000477023.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=CCO57_RS23050;product=peptide antibiotic transporter SbmA;protein_id=WP_000477023.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 35339 36496 . + . ID=gene-CCO57_RS23060;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=CCO57_RS23060;old_locus_tag=CCO57_23035 NZ_NPMC01000024.1 Protein Homology CDS 35339 36496 . + 0 ID=cds-WP_000830780.1;Parent=gene-CCO57_RS23060;Dbxref=GenBank:WP_000830780.1;Name=WP_000830780.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=CCO57_RS23060;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830780.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 36541 37164 . - . ID=gene-CCO57_RS23065;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=CCO57_RS23065;old_locus_tag=CCO57_23040 NZ_NPMC01000024.1 Protein Homology CDS 36541 37164 . - 0 ID=cds-WP_000950236.1;Parent=gene-CCO57_RS23065;Dbxref=GenBank:WP_000950236.1;Name=WP_000950236.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=CCO57_RS23065;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950236.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 37250 40225 . - . ID=gene-CCO57_RS23070;Name=CCO57_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23070;old_locus_tag=CCO57_23045 NZ_NPMC01000024.1 Protein Homology CDS 37250 40225 . - 0 ID=cds-WP_094915190.1;Parent=gene-CCO57_RS23070;Dbxref=GenBank:WP_094915190.1;Name=WP_094915190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556509.1;locus_tag=CCO57_RS23070;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_094915190.1;transl_table=11 NZ_NPMC01000024.1 RefSeq gene 40738 41712 . + . ID=gene-CCO57_RS23075;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CCO57_RS23075;old_locus_tag=CCO57_23050 NZ_NPMC01000024.1 Protein Homology CDS 40738 41712 . + 0 ID=cds-WP_000130724.1;Parent=gene-CCO57_RS23075;Dbxref=GenBank:WP_000130724.1;Name=WP_000130724.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=CCO57_RS23075;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11 ##sequence-region NZ_NPMC01000025.1 1 31750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000025.1 RefSeq region 1 31750 . + . ID=NZ_NPMC01000025.1:1..31750;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000025.1 RefSeq pseudogene 1 134 . + . ID=gene-CCO57_RS23085;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO57_RS23085;old_locus_tag=CCO57_23055;partial=true;pseudo=true;start_range=.,1 NZ_NPMC01000025.1 Protein Homology CDS 1 134 . + 2 ID=cds-CCO57_RS23085;Parent=gene-CCO57_RS23085;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO57_RS23085;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 364 747 . + . ID=gene-CCO57_RS23090;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CCO57_RS23090;old_locus_tag=CCO57_23060 NZ_NPMC01000025.1 Protein Homology CDS 364 747 . + 0 ID=cds-WP_001275691.1;Parent=gene-CCO57_RS23090;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=CCO57_RS23090;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 749 1294 . + . ID=gene-CCO57_RS23095;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CCO57_RS23095;old_locus_tag=CCO57_23065 NZ_NPMC01000025.1 Protein Homology CDS 749 1294 . + 0 ID=cds-WP_001287521.1;Parent=gene-CCO57_RS23095;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=CCO57_RS23095;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 1452 1880 . + . ID=gene-CCO57_RS23100;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CCO57_RS23100;old_locus_tag=CCO57_23070 NZ_NPMC01000025.1 Protein Homology CDS 1452 1880 . + 0 ID=cds-WP_001085926.1;Parent=gene-CCO57_RS23100;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=CCO57_RS23100;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 1884 2588 . + . ID=gene-CCO57_RS23105;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CCO57_RS23105;old_locus_tag=CCO57_23075 NZ_NPMC01000025.1 Protein Homology CDS 1884 2588 . + 0 ID=cds-WP_001096676.1;Parent=gene-CCO57_RS23105;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=CCO57_RS23105;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 3004 3501 . + . ID=gene-CCO57_RS23115;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CCO57_RS23115;old_locus_tag=CCO57_23085 NZ_NPMC01000025.1 Protein Homology CDS 3004 3501 . + 0 ID=cds-WP_001207203.1;Parent=gene-CCO57_RS23115;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=CCO57_RS23115;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 3568 3933 . + . ID=gene-CCO57_RS23120;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CCO57_RS23120;old_locus_tag=CCO57_23090 NZ_NPMC01000025.1 Protein Homology CDS 3568 3933 . + 0 ID=cds-WP_000028882.1;Parent=gene-CCO57_RS23120;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=CCO57_RS23120;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 4251 8279 . + . ID=gene-CCO57_RS23125;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CCO57_RS23125;old_locus_tag=CCO57_23095 NZ_NPMC01000025.1 Protein Homology CDS 4251 8279 . + 0 ID=cds-WP_000263105.1;Parent=gene-CCO57_RS23125;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=CCO57_RS23125;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 8356 12579 . + . ID=gene-CCO57_RS23130;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CCO57_RS23130;old_locus_tag=CCO57_23100 NZ_NPMC01000025.1 Protein Homology CDS 8356 12579 . + 0 ID=cds-WP_000653965.1;Parent=gene-CCO57_RS23130;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=CCO57_RS23130;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 12621 12947 . + . ID=gene-CCO57_RS23135;Name=CCO57_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23135;old_locus_tag=CCO57_23105 NZ_NPMC01000025.1 Protein Homology CDS 12621 12947 . + 0 ID=cds-WP_079846643.1;Parent=gene-CCO57_RS23135;Dbxref=GenBank:WP_079846643.1;Name=WP_079846643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=CCO57_RS23135;product=hypothetical protein;protein_id=WP_079846643.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 12925 13293 . - . ID=gene-CCO57_RS23140;Name=CCO57_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23140;old_locus_tag=CCO57_23110 NZ_NPMC01000025.1 Protein Homology CDS 12925 13293 . - 0 ID=cds-WP_079846642.1;Parent=gene-CCO57_RS23140;Dbxref=GenBank:WP_079846642.1;Name=WP_079846642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=CCO57_RS23140;product=cytoplasmic protein;protein_id=WP_079846642.1;transl_table=11 NZ_NPMC01000025.1 RefSeq pseudogene 13615 13722 . - . ID=gene-CCO57_RS25070;Name=CCO57_RS25070;end_range=13722,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25070;partial=true;pseudo=true NZ_NPMC01000025.1 Protein Homology CDS 13615 13722 . - 0 ID=cds-CCO57_RS25070;Parent=gene-CCO57_RS25070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=CCO57_RS25070;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_NPMC01000025.1 RefSeq pseudogene 13705 13856 . + . ID=gene-CCO57_RS23145;Name=CCO57_RS23145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23145;old_locus_tag=CCO57_23115;pseudo=true NZ_NPMC01000025.1 Protein Homology CDS 13705 13856 . + 0 ID=cds-CCO57_RS23145;Parent=gene-CCO57_RS23145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=CCO57_RS23145;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 14043 15176 . - . ID=gene-CCO57_RS23150;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=CCO57_RS23150;old_locus_tag=CCO57_23120 NZ_NPMC01000025.1 Protein Homology CDS 14043 15176 . - 0 ID=cds-WP_000847574.1;Parent=gene-CCO57_RS23150;Dbxref=GenBank:WP_000847574.1;Name=WP_000847574.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=CCO57_RS23150;product=2-iminoacetate synthase ThiH;protein_id=WP_000847574.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 15173 15943 . - . ID=gene-CCO57_RS23155;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=CCO57_RS23155;old_locus_tag=CCO57_23125 NZ_NPMC01000025.1 Protein Homology CDS 15173 15943 . - 0 ID=cds-WP_000944125.1;Parent=gene-CCO57_RS23155;Dbxref=GenBank:WP_000944125.1;Name=WP_000944125.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=CCO57_RS23155;product=thiazole synthase;protein_id=WP_000944125.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 15945 16145 . - . ID=gene-CCO57_RS23160;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CCO57_RS23160;old_locus_tag=CCO57_23130 NZ_NPMC01000025.1 Protein Homology CDS 15945 16145 . - 0 ID=cds-WP_001165560.1;Parent=gene-CCO57_RS23160;Dbxref=GenBank:WP_001165560.1;Name=WP_001165560.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=CCO57_RS23160;product=sulfur carrier protein ThiS;protein_id=WP_001165560.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 16126 16884 . - . ID=gene-CCO57_RS23165;Name=CCO57_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23165;old_locus_tag=CCO57_23135 NZ_NPMC01000025.1 Protein Homology CDS 16126 16884 . - 0 ID=cds-WP_000999765.1;Parent=gene-CCO57_RS23165;Dbxref=GenBank:WP_000999765.1;Name=WP_000999765.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=CCO57_RS23165;product=HesA/MoeB/ThiF family protein;protein_id=WP_000999765.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 16877 17512 . - . ID=gene-CCO57_RS23170;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CCO57_RS23170;old_locus_tag=CCO57_23140 NZ_NPMC01000025.1 Protein Homology CDS 16877 17512 . - 0 ID=cds-WP_000284649.1;Parent=gene-CCO57_RS23170;Dbxref=GenBank:WP_000284649.1;Name=WP_000284649.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=CCO57_RS23170;product=thiamine phosphate synthase;protein_id=WP_000284649.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 17512 19407 . - . ID=gene-CCO57_RS23175;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CCO57_RS23175;old_locus_tag=CCO57_23145 NZ_NPMC01000025.1 Protein Homology CDS 17512 19407 . - 0 ID=cds-WP_000108416.1;Parent=gene-CCO57_RS23175;Dbxref=GenBank:WP_000108416.1;Name=WP_000108416.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541272.1;locus_tag=CCO57_RS23175;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_000108416.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 19771 20259 . - . ID=gene-CCO57_RS23180;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=CCO57_RS23180;old_locus_tag=CCO57_23150 NZ_NPMC01000025.1 Protein Homology CDS 19771 20259 . - 0 ID=cds-WP_000934317.1;Parent=gene-CCO57_RS23180;Dbxref=GenBank:WP_000934317.1;Name=WP_000934317.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=CCO57_RS23180;product=sigma D regulator;protein_id=WP_000934317.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 20352 21125 . + . ID=gene-CCO57_RS23185;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=CCO57_RS23185;old_locus_tag=CCO57_23155 NZ_NPMC01000025.1 Protein Homology CDS 20352 21125 . + 0 ID=cds-WP_000373956.1;Parent=gene-CCO57_RS23185;Dbxref=GenBank:WP_000373956.1;Name=WP_000373956.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=CCO57_RS23185;product=NAD(+) diphosphatase;protein_id=WP_000373956.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 21166 22230 . + . ID=gene-CCO57_RS23190;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CCO57_RS23190;old_locus_tag=CCO57_23160 NZ_NPMC01000025.1 Protein Homology CDS 21166 22230 . + 0 ID=cds-WP_000137620.1;Parent=gene-CCO57_RS23190;Dbxref=GenBank:WP_000137620.1;Name=WP_000137620.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=CCO57_RS23190;product=uroporphyrinogen decarboxylase;protein_id=WP_000137620.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 22240 22911 . + . ID=gene-CCO57_RS23195;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=CCO57_RS23195;old_locus_tag=CCO57_23165 NZ_NPMC01000025.1 Protein Homology CDS 22240 22911 . + 0 ID=cds-WP_001529320.1;Parent=gene-CCO57_RS23195;Dbxref=GenBank:WP_001529320.1;Name=WP_001529320.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=CCO57_RS23195;product=deoxyribonuclease V;protein_id=WP_001529320.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 22953 23543 . + . ID=gene-CCO57_RS23200;Name=CCO57_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23200;old_locus_tag=CCO57_23170 NZ_NPMC01000025.1 Protein Homology CDS 22953 23543 . + 0 ID=cds-WP_094915191.1;Parent=gene-CCO57_RS23200;Dbxref=GenBank:WP_094915191.1;Name=WP_094915191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=CCO57_RS23200;product=YjaG family protein;protein_id=WP_094915191.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 23730 24002 . + . ID=gene-CCO57_RS23205;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=CCO57_RS23205;old_locus_tag=CCO57_23175 NZ_NPMC01000025.1 Protein Homology CDS 23730 24002 . + 0 ID=cds-WP_001044509.1;Parent=gene-CCO57_RS23205;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=CCO57_RS23205;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 24014 24706 . + . ID=gene-CCO57_RS23210;Name=CCO57_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23210;old_locus_tag=CCO57_23180 NZ_NPMC01000025.1 Protein Homology CDS 24014 24706 . + 0 ID=cds-WP_001083932.1;Parent=gene-CCO57_RS23210;Dbxref=GenBank:WP_001083932.1;Name=WP_001083932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=CCO57_RS23210;product=DUF1481 domain-containing protein;protein_id=WP_001083932.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 24748 25203 . - . ID=gene-CCO57_RS23215;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=CCO57_RS23215;old_locus_tag=CCO57_23185 NZ_NPMC01000025.1 Protein Homology CDS 24748 25203 . - 0 ID=cds-WP_000828129.1;Parent=gene-CCO57_RS23215;Dbxref=GenBank:WP_000828129.1;Name=WP_000828129.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=CCO57_RS23215;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828129.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 25457 26854 . + . ID=gene-CCO57_RS23220;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=CCO57_RS23220;old_locus_tag=CCO57_23190 NZ_NPMC01000025.1 Protein Homology CDS 25457 26854 . + 0 ID=cds-WP_094915192.1;Parent=gene-CCO57_RS23220;Dbxref=GenBank:WP_094915192.1;Name=WP_094915192.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=CCO57_RS23220;product=two-component system sensor histidine kinase ZraS;protein_id=WP_094915192.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 26860 28185 . + . ID=gene-CCO57_RS23225;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=CCO57_RS23225;old_locus_tag=CCO57_23195 NZ_NPMC01000025.1 Protein Homology CDS 26860 28185 . + 0 ID=cds-WP_023219293.1;Parent=gene-CCO57_RS23225;Dbxref=GenBank:WP_023219293.1;Name=WP_023219293.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=CCO57_RS23225;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_023219293.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 28182 29471 . - . ID=gene-CCO57_RS23230;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CCO57_RS23230;old_locus_tag=CCO57_23200 NZ_NPMC01000025.1 Protein Homology CDS 28182 29471 . - 0 ID=cds-WP_094915193.1;Parent=gene-CCO57_RS23230;Dbxref=GenBank:WP_094915193.1;Name=WP_094915193.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=CCO57_RS23230;product=phosphoribosylamine--glycine ligase;protein_id=WP_094915193.1;transl_table=11 NZ_NPMC01000025.1 RefSeq gene 29487 31076 . - . ID=gene-CCO57_RS23235;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CCO57_RS23235;old_locus_tag=CCO57_23205 NZ_NPMC01000025.1 Protein Homology CDS 29487 31076 . - 0 ID=cds-WP_001187519.1;Parent=gene-CCO57_RS23235;Dbxref=GenBank:WP_001187519.1;Name=WP_001187519.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=CCO57_RS23235;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187519.1;transl_table=11 ##sequence-region NZ_NPMC01000026.1 1 26362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000026.1 RefSeq region 1 26362 . + . ID=NZ_NPMC01000026.1:1..26362;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000026.1 RefSeq pseudogene 1 134 . + . ID=gene-CCO57_RS23240;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO57_RS23240;old_locus_tag=CCO57_23210;partial=true;pseudo=true;start_range=.,1 NZ_NPMC01000026.1 Protein Homology CDS 1 134 . + 2 ID=cds-CCO57_RS23240;Parent=gene-CCO57_RS23240;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO57_RS23240;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 319 513 . + . ID=gene-CCO57_RS23255;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=CCO57_RS23255;old_locus_tag=CCO57_23225 NZ_NPMC01000026.1 Protein Homology CDS 319 513 . + 0 ID=cds-WP_000289082.1;Parent=gene-CCO57_RS23255;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=CCO57_RS23255;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 586 1062 . + . ID=gene-CCO57_RS23260;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=CCO57_RS23260;old_locus_tag=CCO57_23230 NZ_NPMC01000026.1 Protein Homology CDS 586 1062 . + 0 ID=cds-WP_000675530.1;Parent=gene-CCO57_RS23260;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=CCO57_RS23260;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 1059 1526 . - . ID=gene-CCO57_RS23265;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=CCO57_RS23265;old_locus_tag=CCO57_23235 NZ_NPMC01000026.1 Protein Homology CDS 1059 1526 . - 0 ID=cds-WP_063917130.1;Parent=gene-CCO57_RS23265;Dbxref=GenBank:WP_063917130.1;Name=WP_063917130.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=CCO57_RS23265;product=prepilin peptidase;protein_id=WP_063917130.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 1906 2217 . + . ID=gene-CCO57_RS23275;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CCO57_RS23275;old_locus_tag=CCO57_23245 NZ_NPMC01000026.1 Protein Homology CDS 1906 2217 . + 0 ID=cds-WP_001181005.1;Parent=gene-CCO57_RS23275;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=CCO57_RS23275;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 2250 2879 . + . ID=gene-CCO57_RS23280;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CCO57_RS23280;old_locus_tag=CCO57_23250 NZ_NPMC01000026.1 Protein Homology CDS 2250 2879 . + 0 ID=cds-WP_000579838.1;Parent=gene-CCO57_RS23280;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=CCO57_RS23280;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 2890 3495 . + . ID=gene-CCO57_RS23285;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CCO57_RS23285;old_locus_tag=CCO57_23255 NZ_NPMC01000026.1 Protein Homology CDS 2890 3495 . + 0 ID=cds-WP_000424395.1;Parent=gene-CCO57_RS23285;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=CCO57_RS23285;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 3492 3794 . + . ID=gene-CCO57_RS23290;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CCO57_RS23290;old_locus_tag=CCO57_23260 NZ_NPMC01000026.1 Protein Homology CDS 3492 3794 . + 0 ID=cds-WP_000617546.1;Parent=gene-CCO57_RS23290;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=CCO57_RS23290;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 3812 4633 . + . ID=gene-CCO57_RS23295;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CCO57_RS23295;old_locus_tag=CCO57_23265 NZ_NPMC01000026.1 Protein Homology CDS 3812 4633 . + 0 ID=cds-WP_000301869.1;Parent=gene-CCO57_RS23295;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=CCO57_RS23295;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 4650 4928 . + . ID=gene-CCO57_RS23300;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CCO57_RS23300;old_locus_tag=CCO57_23270 NZ_NPMC01000026.1 Protein Homology CDS 4650 4928 . + 0 ID=cds-WP_001138115.1;Parent=gene-CCO57_RS23300;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=CCO57_RS23300;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 4943 5275 . + . ID=gene-CCO57_RS23305;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CCO57_RS23305;old_locus_tag=CCO57_23275 NZ_NPMC01000026.1 Protein Homology CDS 4943 5275 . + 0 ID=cds-WP_000447529.1;Parent=gene-CCO57_RS23305;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=CCO57_RS23305;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 5293 5994 . + . ID=gene-CCO57_RS23310;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CCO57_RS23310;old_locus_tag=CCO57_23280 NZ_NPMC01000026.1 Protein Homology CDS 5293 5994 . + 0 ID=cds-WP_000529945.1;Parent=gene-CCO57_RS23310;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=CCO57_RS23310;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 6007 6417 . + . ID=gene-CCO57_RS23315;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CCO57_RS23315;old_locus_tag=CCO57_23285 NZ_NPMC01000026.1 Protein Homology CDS 6007 6417 . + 0 ID=cds-WP_000941208.1;Parent=gene-CCO57_RS23315;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=CCO57_RS23315;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 6417 6608 . + . ID=gene-CCO57_RS23320;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CCO57_RS23320;old_locus_tag=CCO57_23290 NZ_NPMC01000026.1 Protein Homology CDS 6417 6608 . + 0 ID=cds-WP_000644742.1;Parent=gene-CCO57_RS23320;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=CCO57_RS23320;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 6608 6862 . + . ID=gene-CCO57_RS23325;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CCO57_RS23325;old_locus_tag=CCO57_23295 NZ_NPMC01000026.1 Protein Homology CDS 6608 6862 . + 0 ID=cds-WP_000130101.1;Parent=gene-CCO57_RS23325;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=CCO57_RS23325;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 7026 7397 . + . ID=gene-CCO57_RS23330;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CCO57_RS23330;old_locus_tag=CCO57_23300 NZ_NPMC01000026.1 Protein Homology CDS 7026 7397 . + 0 ID=cds-WP_000613954.1;Parent=gene-CCO57_RS23330;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=CCO57_RS23330;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 7408 7722 . + . ID=gene-CCO57_RS23335;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CCO57_RS23335;old_locus_tag=CCO57_23305 NZ_NPMC01000026.1 Protein Homology CDS 7408 7722 . + 0 ID=cds-WP_000729185.1;Parent=gene-CCO57_RS23335;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=CCO57_RS23335;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 7737 8276 . + . ID=gene-CCO57_RS23340;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CCO57_RS23340;old_locus_tag=CCO57_23310 NZ_NPMC01000026.1 Protein Homology CDS 7737 8276 . + 0 ID=cds-WP_001096206.1;Parent=gene-CCO57_RS23340;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=CCO57_RS23340;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 8291 8596 . + . ID=gene-CCO57_RS23345;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CCO57_RS23345;old_locus_tag=CCO57_23315 NZ_NPMC01000026.1 Protein Homology CDS 8291 8596 . + 0 ID=cds-WP_001118932.1;Parent=gene-CCO57_RS23345;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=CCO57_RS23345;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 8630 9022 . + . ID=gene-CCO57_RS23350;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CCO57_RS23350;old_locus_tag=CCO57_23320 NZ_NPMC01000026.1 Protein Homology CDS 8630 9022 . + 0 ID=cds-WP_000062611.1;Parent=gene-CCO57_RS23350;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=CCO57_RS23350;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 9035 9568 . + . ID=gene-CCO57_RS23355;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CCO57_RS23355;old_locus_tag=CCO57_23325 NZ_NPMC01000026.1 Protein Homology CDS 9035 9568 . + 0 ID=cds-WP_000091939.1;Parent=gene-CCO57_RS23355;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=CCO57_RS23355;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 9578 9931 . + . ID=gene-CCO57_RS23360;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CCO57_RS23360;old_locus_tag=CCO57_23330 NZ_NPMC01000026.1 Protein Homology CDS 9578 9931 . + 0 ID=cds-WP_000358956.1;Parent=gene-CCO57_RS23360;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=CCO57_RS23360;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 9946 10449 . + . ID=gene-CCO57_RS23365;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CCO57_RS23365;old_locus_tag=CCO57_23335 NZ_NPMC01000026.1 Protein Homology CDS 9946 10449 . + 0 ID=cds-WP_000940121.1;Parent=gene-CCO57_RS23365;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=CCO57_RS23365;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 10453 10632 . + . ID=gene-CCO57_RS23370;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CCO57_RS23370;old_locus_tag=CCO57_23340 NZ_NPMC01000026.1 Protein Homology CDS 10453 10632 . + 0 ID=cds-WP_001140434.1;Parent=gene-CCO57_RS23370;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=CCO57_RS23370;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 10636 11070 . + . ID=gene-CCO57_RS23375;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CCO57_RS23375;old_locus_tag=CCO57_23345 NZ_NPMC01000026.1 Protein Homology CDS 10636 11070 . + 0 ID=cds-WP_001238917.1;Parent=gene-CCO57_RS23375;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=CCO57_RS23375;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 11078 12409 . + . ID=gene-CCO57_RS23380;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CCO57_RS23380;old_locus_tag=CCO57_23350 NZ_NPMC01000026.1 Protein Homology CDS 11078 12409 . + 0 ID=cds-WP_001118864.1;Parent=gene-CCO57_RS23380;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=CCO57_RS23380;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 12441 12557 . + . ID=gene-CCO57_RS23385;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CCO57_RS23385;old_locus_tag=CCO57_23355 NZ_NPMC01000026.1 Protein Homology CDS 12441 12557 . + 0 ID=cds-WP_000868187.1;Parent=gene-CCO57_RS23385;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=CCO57_RS23385;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 12704 13060 . + . ID=gene-CCO57_RS23390;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CCO57_RS23390;old_locus_tag=CCO57_23360 NZ_NPMC01000026.1 Protein Homology CDS 12704 13060 . + 0 ID=cds-WP_000090780.1;Parent=gene-CCO57_RS23390;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=CCO57_RS23390;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 13077 13466 . + . ID=gene-CCO57_RS23395;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CCO57_RS23395;old_locus_tag=CCO57_23365 NZ_NPMC01000026.1 Protein Homology CDS 13077 13466 . + 0 ID=cds-WP_001029758.1;Parent=gene-CCO57_RS23395;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=CCO57_RS23395;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 13500 14120 . + . ID=gene-CCO57_RS23400;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CCO57_RS23400;old_locus_tag=CCO57_23370 NZ_NPMC01000026.1 Protein Homology CDS 13500 14120 . + 0 ID=cds-WP_000135226.1;Parent=gene-CCO57_RS23400;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=CCO57_RS23400;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 14146 15135 . + . ID=gene-CCO57_RS23405;Name=CCO57_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23405;old_locus_tag=CCO57_23375 NZ_NPMC01000026.1 Protein Homology CDS 14146 15135 . + 0 ID=cds-WP_001162094.1;Parent=gene-CCO57_RS23405;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=CCO57_RS23405;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 15176 15559 . + . ID=gene-CCO57_RS23410;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CCO57_RS23410;old_locus_tag=CCO57_23380 NZ_NPMC01000026.1 Protein Homology CDS 15176 15559 . + 0 ID=cds-WP_001216370.1;Parent=gene-CCO57_RS23410;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=CCO57_RS23410;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 15667 16035 . + . ID=gene-CCO57_RS23415;Name=CCO57_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23415;old_locus_tag=CCO57_23385 NZ_NPMC01000026.1 Protein Homology CDS 15667 16035 . + 0 ID=cds-WP_000266515.1;Parent=gene-CCO57_RS23415;Dbxref=GenBank:WP_000266515.1;Name=WP_000266515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=CCO57_RS23415;product=DUF1992 domain-containing protein;protein_id=WP_000266515.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 16046 16471 . + . ID=gene-CCO57_RS23420;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=CCO57_RS23420;old_locus_tag=CCO57_23390 NZ_NPMC01000026.1 Protein Homology CDS 16046 16471 . + 0 ID=cds-WP_094915194.1;Parent=gene-CCO57_RS23420;Dbxref=GenBank:WP_094915194.1;Name=WP_094915194.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=CCO57_RS23420;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_094915194.1;transl_table=11 NZ_NPMC01000026.1 RefSeq pseudogene 16529 16732 . + . ID=gene-CCO57_RS23425;Name=CCO57_RS23425;end_range=16732,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23425;old_locus_tag=CCO57_23395;partial=true;pseudo=true NZ_NPMC01000026.1 Protein Homology CDS 16529 16732 . + 0 ID=cds-CCO57_RS23425;Parent=gene-CCO57_RS23425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16732,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=CCO57_RS23425;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 16734 17147 . - . ID=gene-CCO57_RS23430;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CCO57_RS23430;old_locus_tag=CCO57_23400 NZ_NPMC01000026.1 Protein Homology CDS 16734 17147 . - 0 ID=cds-WP_000008119.1;Parent=gene-CCO57_RS23430;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=CCO57_RS23430;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 17289 18665 . - . ID=gene-CCO57_RS23435;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=CCO57_RS23435;old_locus_tag=CCO57_23405 NZ_NPMC01000026.1 Protein Homology CDS 17289 18665 . - 0 ID=cds-WP_000691374.1;Parent=gene-CCO57_RS23435;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=CCO57_RS23435;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 18687 19976 . - . ID=gene-CCO57_RS23440;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CCO57_RS23440;old_locus_tag=CCO57_23410 NZ_NPMC01000026.1 Protein Homology CDS 18687 19976 . - 0 ID=cds-WP_000744599.1;Parent=gene-CCO57_RS23440;Dbxref=GenBank:WP_000744599.1;Name=WP_000744599.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=CCO57_RS23440;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_000744599.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 20028 20975 . - . ID=gene-CCO57_RS23445;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CCO57_RS23445;old_locus_tag=CCO57_23415 NZ_NPMC01000026.1 Protein Homology CDS 20028 20975 . - 0 ID=cds-WP_001285165.1;Parent=gene-CCO57_RS23445;Dbxref=GenBank:WP_001285165.1;Name=WP_001285165.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=CCO57_RS23445;product=methionyl-tRNA formyltransferase;protein_id=WP_001285165.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 20991 21500 . - . ID=gene-CCO57_RS23450;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CCO57_RS23450;old_locus_tag=CCO57_23420 NZ_NPMC01000026.1 Protein Homology CDS 20991 21500 . - 0 ID=cds-WP_000114987.1;Parent=gene-CCO57_RS23450;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=CCO57_RS23450;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 21632 22756 . + . ID=gene-CCO57_RS23455;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CCO57_RS23455;old_locus_tag=CCO57_23425 NZ_NPMC01000026.1 Protein Homology CDS 21632 22756 . + 0 ID=cds-WP_023220371.1;Parent=gene-CCO57_RS23455;Dbxref=GenBank:WP_023220371.1;Name=WP_023220371.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=CCO57_RS23455;product=DNA-protecting protein DprA;protein_id=WP_023220371.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 22728 23201 . + . ID=gene-CCO57_RS23460;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=CCO57_RS23460;old_locus_tag=CCO57_23430 NZ_NPMC01000026.1 Protein Homology CDS 22728 23201 . + 0 ID=cds-WP_000460663.1;Parent=gene-CCO57_RS23460;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=CCO57_RS23460;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 23228 23770 . + . ID=gene-CCO57_RS23465;Name=CCO57_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23465;old_locus_tag=CCO57_23435 NZ_NPMC01000026.1 Protein Homology CDS 23228 23770 . + 0 ID=cds-WP_001129708.1;Parent=gene-CCO57_RS23465;Dbxref=GenBank:WP_001129708.1;Name=WP_001129708.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=CCO57_RS23465;product=DNA topoisomerase family protein;protein_id=WP_001129708.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 23775 24347 . + . ID=gene-CCO57_RS23470;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=CCO57_RS23470;old_locus_tag=CCO57_23440 NZ_NPMC01000026.1 Protein Homology CDS 23775 24347 . + 0 ID=cds-WP_001063621.1;Parent=gene-CCO57_RS23470;Dbxref=GenBank:WP_001063621.1;Name=WP_001063621.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=CCO57_RS23470;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063621.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 24352 25170 . + . ID=gene-CCO57_RS23475;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CCO57_RS23475;old_locus_tag=CCO57_23445 NZ_NPMC01000026.1 Protein Homology CDS 24352 25170 . + 0 ID=cds-WP_000451203.1;Parent=gene-CCO57_RS23475;Dbxref=GenBank:WP_000451203.1;Name=WP_000451203.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=CCO57_RS23475;product=shikimate dehydrogenase;protein_id=WP_000451203.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 25167 25424 . + . ID=gene-CCO57_RS23480;Name=CCO57_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23480;old_locus_tag=CCO57_23450 NZ_NPMC01000026.1 Protein Homology CDS 25167 25424 . + 0 ID=cds-WP_001070578.1;Parent=gene-CCO57_RS23480;Dbxref=GenBank:WP_001070578.1;Name=WP_001070578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=CCO57_RS23480;product=DUF1488 domain-containing protein;protein_id=WP_001070578.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 25400 25954 . - . ID=gene-CCO57_RS23485;Name=CCO57_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23485;old_locus_tag=CCO57_23455 NZ_NPMC01000026.1 Protein Homology CDS 25400 25954 . - 0 ID=cds-WP_001285635.1;Parent=gene-CCO57_RS23485;Dbxref=GenBank:WP_001285635.1;Name=WP_001285635.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=CCO57_RS23485;product=gamma carbonic anhydrase family protein;protein_id=WP_001285635.1;transl_table=11 NZ_NPMC01000026.1 RefSeq gene 26068 26220 . + . ID=gene-CCO57_RS24375;Name=CCO57_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24375 NZ_NPMC01000026.1 GeneMarkS-2+ CDS 26068 26220 . + 0 ID=cds-WP_000795911.1;Parent=gene-CCO57_RS24375;Dbxref=GenBank:WP_000795911.1;Name=WP_000795911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24375;product=hypothetical protein;protein_id=WP_000795911.1;transl_table=11 ##sequence-region NZ_NPMC01000027.1 1 25050 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000027.1 RefSeq region 1 25050 . + . ID=NZ_NPMC01000027.1:1..25050;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000027.1 RefSeq gene 216 1865 . - . ID=gene-CCO57_RS23495;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=CCO57_RS23495;old_locus_tag=CCO57_23465 NZ_NPMC01000027.1 Protein Homology CDS 216 1865 . - 0 ID=cds-WP_000790032.1;Parent=gene-CCO57_RS23495;Dbxref=GenBank:WP_000790032.1;Name=WP_000790032.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=CCO57_RS23495;product=glucose-6-phosphate isomerase;protein_id=WP_000790032.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 2253 3602 . + . ID=gene-CCO57_RS23500;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO57_RS23500;old_locus_tag=CCO57_23470 NZ_NPMC01000027.1 Protein Homology CDS 2253 3602 . + 0 ID=cds-WP_000136392.1;Parent=gene-CCO57_RS23500;Dbxref=GenBank:WP_000136392.1;Name=WP_000136392.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=CCO57_RS23500;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136392.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 3979 5568 . + . ID=gene-CCO57_RS23510;Name=CCO57_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23510;old_locus_tag=CCO57_23480 NZ_NPMC01000027.1 Protein Homology CDS 3979 5568 . + 0 ID=cds-WP_176453487.1;Parent=gene-CCO57_RS23510;Dbxref=GenBank:WP_176453487.1;Name=WP_176453487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=CCO57_RS23510;product=PTS sugar transporter;protein_id=WP_176453487.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 5592 6431 . + . ID=gene-CCO57_RS23515;Name=CCO57_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23515;old_locus_tag=CCO57_23485 NZ_NPMC01000027.1 Protein Homology CDS 5592 6431 . + 0 ID=cds-WP_000472329.1;Parent=gene-CCO57_RS23515;Dbxref=GenBank:WP_000472329.1;Name=WP_000472329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=CCO57_RS23515;product=hypothetical protein;protein_id=WP_000472329.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 6448 7311 . + . ID=gene-CCO57_RS23520;Name=CCO57_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23520;old_locus_tag=CCO57_23490 NZ_NPMC01000027.1 Protein Homology CDS 6448 7311 . + 0 ID=cds-WP_000924644.1;Parent=gene-CCO57_RS23520;Dbxref=GenBank:WP_000924644.1;Name=WP_000924644.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=CCO57_RS23520;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000924644.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 7298 8056 . + . ID=gene-CCO57_RS23525;Name=CCO57_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23525;old_locus_tag=CCO57_23495 NZ_NPMC01000027.1 Protein Homology CDS 7298 8056 . + 0 ID=cds-WP_001068171.1;Parent=gene-CCO57_RS23525;Dbxref=GenBank:WP_001068171.1;Name=WP_001068171.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=CCO57_RS23525;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001068171.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 8267 8539 . + . ID=gene-CCO57_RS23535;Name=CCO57_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23535;old_locus_tag=CCO57_23505 NZ_NPMC01000027.1 Protein Homology CDS 8267 8539 . + 0 ID=cds-WP_001207628.1;Parent=gene-CCO57_RS23535;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=CCO57_RS23535;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 8536 9405 . - . ID=gene-CCO57_RS23540;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=CCO57_RS23540;old_locus_tag=CCO57_23510 NZ_NPMC01000027.1 Protein Homology CDS 8536 9405 . - 0 ID=cds-WP_094915196.1;Parent=gene-CCO57_RS23540;Dbxref=GenBank:WP_094915196.1;Name=WP_094915196.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=CCO57_RS23540;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_094915196.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 9452 9991 . - . ID=gene-CCO57_RS23545;Name=CCO57_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23545;old_locus_tag=CCO57_23515 NZ_NPMC01000027.1 Protein Homology CDS 9452 9991 . - 0 ID=cds-WP_001096724.1;Parent=gene-CCO57_RS23545;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=CCO57_RS23545;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 10026 10127 . - . ID=gene-CCO57_RS23550;Name=CCO57_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23550;old_locus_tag=CCO57_23520 NZ_NPMC01000027.1 Protein Homology CDS 10026 10127 . - 0 ID=cds-WP_031603453.1;Parent=gene-CCO57_RS23550;Dbxref=GenBank:WP_031603453.1;Name=WP_031603453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=CCO57_RS23550;product=hypothetical protein;protein_id=WP_031603453.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 10199 10888 . + . ID=gene-CCO57_RS23555;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=CCO57_RS23555;old_locus_tag=CCO57_23525 NZ_NPMC01000027.1 Protein Homology CDS 10199 10888 . + 0 ID=cds-WP_000421776.1;Parent=gene-CCO57_RS23555;Dbxref=GenBank:WP_000421776.1;Name=WP_000421776.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=CCO57_RS23555;product=dipeptidase PepE;protein_id=WP_000421776.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 10963 12594 . - . ID=gene-CCO57_RS23560;Name=CCO57_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23560;old_locus_tag=CCO57_23530 NZ_NPMC01000027.1 Protein Homology CDS 10963 12594 . - 0 ID=cds-WP_000956811.1;Parent=gene-CCO57_RS23560;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=CCO57_RS23560;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 12861 16544 . - . ID=gene-CCO57_RS23565;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=CCO57_RS23565;old_locus_tag=CCO57_23535 NZ_NPMC01000027.1 Protein Homology CDS 12861 16544 . - 0 ID=cds-WP_023213886.1;Parent=gene-CCO57_RS23565;Dbxref=GenBank:WP_023213886.1;Name=WP_023213886.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=CCO57_RS23565;product=methionine synthase;protein_id=WP_023213886.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 16848 17672 . + . ID=gene-CCO57_RS23570;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=CCO57_RS23570;old_locus_tag=CCO57_23540 NZ_NPMC01000027.1 Protein Homology CDS 16848 17672 . + 0 ID=cds-WP_000226430.1;Parent=gene-CCO57_RS23570;Dbxref=GenBank:WP_000226430.1;Name=WP_000226430.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=CCO57_RS23570;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226430.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 17683 18090 . + . ID=gene-CCO57_RS23575;Name=CCO57_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23575;old_locus_tag=CCO57_23545 NZ_NPMC01000027.1 Protein Homology CDS 17683 18090 . + 0 ID=cds-WP_010989091.1;Parent=gene-CCO57_RS23575;Dbxref=GenBank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=CCO57_RS23575;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 18054 19805 . - . ID=gene-CCO57_RS23580;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=CCO57_RS23580;old_locus_tag=CCO57_23550 NZ_NPMC01000027.1 Protein Homology CDS 18054 19805 . - 0 ID=cds-WP_076936098.1;Parent=gene-CCO57_RS23580;Dbxref=GenBank:WP_076936098.1;Name=WP_076936098.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=CCO57_RS23580;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_076936098.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 19906 21210 . - . ID=gene-CCO57_RS23585;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=CCO57_RS23585;old_locus_tag=CCO57_23555 NZ_NPMC01000027.1 Protein Homology CDS 19906 21210 . - 0 ID=cds-WP_000857878.1;Parent=gene-CCO57_RS23585;Dbxref=GenBank:WP_000857878.1;Name=WP_000857878.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=CCO57_RS23585;product=isocitrate lyase;protein_id=WP_000857878.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 21242 22843 . - . ID=gene-CCO57_RS23590;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=CCO57_RS23590;old_locus_tag=CCO57_23560 NZ_NPMC01000027.1 Protein Homology CDS 21242 22843 . - 0 ID=cds-WP_001069371.1;Parent=gene-CCO57_RS23590;Dbxref=GenBank:WP_001069371.1;Name=WP_001069371.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=CCO57_RS23590;product=malate synthase A;protein_id=WP_001069371.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 23112 24041 . - . ID=gene-CCO57_RS23595;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=CCO57_RS23595;old_locus_tag=CCO57_23565 NZ_NPMC01000027.1 Protein Homology CDS 23112 24041 . - 0 ID=cds-WP_001122767.1;Parent=gene-CCO57_RS23595;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=CCO57_RS23595;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 24198 24635 . + . ID=gene-CCO57_RS23600;Name=CCO57_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23600;old_locus_tag=CCO57_23570 NZ_NPMC01000027.1 Protein Homology CDS 24198 24635 . + 0 ID=cds-WP_000973248.1;Parent=gene-CCO57_RS23600;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=CCO57_RS23600;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11 NZ_NPMC01000027.1 RefSeq gene 24931 25046 . - . ID=gene-CCO57_RS23605;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO57_RS23605;old_locus_tag=CCO57_23575 NZ_NPMC01000027.1 cmsearch rRNA 24931 25046 . - . ID=rna-CCO57_RS23605;Parent=gene-CCO57_RS23605;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23605;product=5S ribosomal RNA NZ_NPMC01000027.1 cmsearch exon 24931 25046 . - . ID=exon-CCO57_RS23605-1;Parent=rna-CCO57_RS23605;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23605;product=5S ribosomal RNA ##sequence-region NZ_NPMC01000028.1 1 19628 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000028.1 RefSeq region 1 19628 . + . ID=NZ_NPMC01000028.1:1..19628;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000028.1 RefSeq gene 57 512 . + . ID=gene-CCO57_RS23610;Name=tinR;gbkey=Gene;gene=tinR;gene_biotype=protein_coding;locus_tag=CCO57_RS23610;old_locus_tag=CCO57_23580 NZ_NPMC01000028.1 Protein Homology CDS 57 512 . + 0 ID=cds-WP_094888811.1;Parent=gene-CCO57_RS23610;Dbxref=GenBank:WP_094888811.1;Name=WP_094888811.1;gbkey=CDS;gene=tinR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219490.1;locus_tag=CCO57_RS23610;product=Lrp/AsnC family transcriptional regulator TinR;protein_id=WP_094888811.1;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 650 1249 . + . ID=gene-CCO57_RS23615;Name=CCO57_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23615;old_locus_tag=CCO57_23585 NZ_NPMC01000028.1 Protein Homology CDS 650 1249 . + 0 ID=cds-WP_094915198.1;Parent=gene-CCO57_RS23615;Dbxref=GenBank:WP_094915198.1;Name=WP_094915198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539141.1;locus_tag=CCO57_RS23615;product=TioA protein;protein_id=WP_094915198.1;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 1547 1738 . + . ID=gene-CCO57_RS24265;Name=CCO57_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24265 NZ_NPMC01000028.1 GeneMarkS-2+ CDS 1547 1738 . + 0 ID=cds-WP_140428189.1;Parent=gene-CCO57_RS24265;Dbxref=GenBank:WP_140428189.1;Name=WP_140428189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24265;product=hypothetical protein;protein_id=WP_140428189.1;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 2167 2898 . + . ID=gene-CCO57_RS23620;Name=CCO57_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23620;old_locus_tag=CCO57_23590 NZ_NPMC01000028.1 Protein Homology CDS 2167 2898 . + 0 ID=cds-WP_094888809.1;Parent=gene-CCO57_RS23620;Dbxref=GenBank:WP_094888809.1;Name=WP_094888809.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=CCO57_RS23620;product=fimbrial biogenesis chaperone;protein_id=WP_094888809.1;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 2970 3509 . + . ID=gene-CCO57_RS23625;Name=CCO57_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23625;old_locus_tag=CCO57_23595 NZ_NPMC01000028.1 Protein Homology CDS 2970 3509 . + 0 ID=cds-WP_176453488.1;Parent=gene-CCO57_RS23625;Dbxref=GenBank:WP_176453488.1;Name=WP_176453488.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=CCO57_RS23625;product=fimbrial protein;protein_id=WP_176453488.1;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 3557 4159 . + . ID=gene-CCO57_RS23630;Name=CCO57_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23630;old_locus_tag=CCO57_23600 NZ_NPMC01000028.1 GeneMarkS-2+ CDS 3557 4159 . + 0 ID=cds-WP_094915200.1;Parent=gene-CCO57_RS23630;Dbxref=GenBank:WP_094915200.1;Name=WP_094915200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS23630;product=hypothetical protein;protein_id=WP_094915200.1;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 4336 6891 . + . ID=gene-CCO57_RS23635;Name=CCO57_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23635;old_locus_tag=CCO57_23605 NZ_NPMC01000028.1 Protein Homology CDS 4336 6891 . + 0 ID=cds-WP_094888806.1;Parent=gene-CCO57_RS23635;Dbxref=GenBank:WP_094888806.1;Name=WP_094888806.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=CCO57_RS23635;product=fimbria/pilus outer membrane usher protein;protein_id=WP_094888806.1;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 6973 8058 . + . ID=gene-CCO57_RS23640;Name=CCO57_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23640;old_locus_tag=CCO57_23610 NZ_NPMC01000028.1 GeneMarkS-2+ CDS 6973 8058 . + 0 ID=cds-WP_140428190.1;Parent=gene-CCO57_RS23640;Dbxref=GenBank:WP_140428190.1;Name=WP_140428190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS23640;product=type 1 fimbrial protein;protein_id=WP_140428190.1;transl_table=11 NZ_NPMC01000028.1 RefSeq pseudogene 8168 8473 . - . ID=gene-CCO57_RS23645;Name=CCO57_RS23645;end_range=8473,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23645;old_locus_tag=CCO57_23615;partial=true;pseudo=true NZ_NPMC01000028.1 Protein Homology CDS 8168 8473 . - 0 ID=cds-CCO57_RS23645;Parent=gene-CCO57_RS23645;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=8473,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=CCO57_RS23645;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_NPMC01000028.1 RefSeq pseudogene 8513 8770 . - . ID=gene-CCO57_RS23650;Name=CCO57_RS23650;end_range=8770,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23650;old_locus_tag=CCO57_23620;partial=true;pseudo=true NZ_NPMC01000028.1 Protein Homology CDS 8513 8770 . - 0 ID=cds-CCO57_RS23650;Parent=gene-CCO57_RS23650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201219.1;locus_tag=CCO57_RS23650;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 8839 10377 . - . ID=gene-CCO57_RS23655;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=CCO57_RS23655;old_locus_tag=CCO57_23625 NZ_NPMC01000028.1 Protein Homology CDS 8839 10377 . - 0 ID=cds-WP_094915202.1;Parent=gene-CCO57_RS23655;Dbxref=GenBank:WP_094915202.1;Name=WP_094915202.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=CCO57_RS23655;product=IS66 family transposase;protein_id=WP_094915202.1;transl_table=11 NZ_NPMC01000028.1 RefSeq pseudogene 10455 10855 . - . ID=gene-CCO57_RS23660;Name=CCO57_RS23660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23660;old_locus_tag=CCO57_23630;partial=true;pseudo=true;start_range=.,10455 NZ_NPMC01000028.1 Protein Homology CDS 10455 10855 . - 0 ID=cds-CCO57_RS23660;Parent=gene-CCO57_RS23660;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=CCO57_RS23660;partial=true;product=transposase;pseudo=true;start_range=.,10455;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 10981 12339 . - . ID=gene-CCO57_RS23670;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=CCO57_RS23670;old_locus_tag=CCO57_23640 NZ_NPMC01000028.1 Protein Homology CDS 10981 12339 . - 0 ID=cds-WP_094888801.1;Parent=gene-CCO57_RS23670;Dbxref=GenBank:WP_094888801.1;Name=WP_094888801.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007854603.1;locus_tag=CCO57_RS23670;product=guanine deaminase;protein_id=WP_094888801.1;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 12909 13226 . - . ID=gene-CCO57_RS24270;Name=CCO57_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24270 NZ_NPMC01000028.1 GeneMarkS-2+ CDS 12909 13226 . - 0 ID=cds-WP_140428191.1;Parent=gene-CCO57_RS24270;Dbxref=GenBank:WP_140428191.1;Name=WP_140428191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24270;product=hypothetical protein;protein_id=WP_140428191.1;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 13596 13946 . + . ID=gene-CCO57_RS23680;Name=CCO57_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23680;old_locus_tag=CCO57_23650 NZ_NPMC01000028.1 Protein Homology CDS 13596 13946 . + 0 ID=cds-WP_094888799.1;Parent=gene-CCO57_RS23680;Dbxref=GenBank:WP_094888799.1;Name=WP_094888799.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019491.6;locus_tag=CCO57_RS23680;product=Dabb family protein;protein_id=WP_094888799.1;transl_table=11 NZ_NPMC01000028.1 RefSeq pseudogene 13977 14069 . + . ID=gene-CCO57_RS23685;Name=CCO57_RS23685;end_range=14069,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23685;partial=true;pseudo=true NZ_NPMC01000028.1 Protein Homology CDS 13977 14069 . + 0 ID=cds-CCO57_RS23685;Parent=gene-CCO57_RS23685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14069,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=CCO57_RS23685;partial=true;product=EamA family transporter;pseudo=true;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 14137 15393 . + . ID=gene-CCO57_RS23690;Name=CCO57_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23690;old_locus_tag=CCO57_23655 NZ_NPMC01000028.1 Protein Homology CDS 14137 15393 . + 0 ID=cds-WP_094888798.1;Parent=gene-CCO57_RS23690;Dbxref=GenBank:WP_094888798.1;Name=WP_094888798.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512524.1;locus_tag=CCO57_RS23690;product=L-lactate MFS transporter;protein_id=WP_094888798.1;transl_table=11 NZ_NPMC01000028.1 RefSeq pseudogene 15523 15714 . + . ID=gene-CCO57_RS23695;Name=CCO57_RS23695;end_range=15714,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23695;old_locus_tag=CCO57_23660;partial=true;pseudo=true;start_range=.,15523 NZ_NPMC01000028.1 Protein Homology CDS 15523 15714 . + 0 ID=cds-CCO57_RS23695;Parent=gene-CCO57_RS23695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=15714,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611385.1;locus_tag=CCO57_RS23695;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,15523;transl_table=11 NZ_NPMC01000028.1 RefSeq pseudogene 16436 16608 . + . ID=gene-CCO57_RS23705;Name=CCO57_RS23705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23705;partial=true;pseudo=true;start_range=.,16436 NZ_NPMC01000028.1 Protein Homology CDS 16436 16608 . + 0 ID=cds-CCO57_RS23705;Parent=gene-CCO57_RS23705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611340.1;locus_tag=CCO57_RS23705;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,16436;transl_table=11 NZ_NPMC01000028.1 RefSeq gene 16672 17829 . - . ID=gene-CCO57_RS23710;Name=CCO57_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23710;old_locus_tag=CCO57_23670 NZ_NPMC01000028.1 Protein Homology CDS 16672 17829 . - 0 ID=cds-WP_094888797.1;Parent=gene-CCO57_RS23710;Dbxref=GenBank:WP_094888797.1;Name=WP_094888797.1;Ontology_term=GO:0016491,GO:0030554,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012678.6;locus_tag=CCO57_RS23710;product=iron-containing alcohol dehydrogenase;protein_id=WP_094888797.1;transl_table=11 NZ_NPMC01000028.1 RefSeq pseudogene 18481 19333 . + . ID=gene-CCO57_RS23715;Name=CCO57_RS23715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23715;old_locus_tag=CCO57_23675;partial=true;pseudo=true;start_range=.,18481 NZ_NPMC01000028.1 Protein Homology CDS 18481 19333 . + 0 ID=cds-CCO57_RS23715;Parent=gene-CCO57_RS23715;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=CCO57_RS23715;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,18481;transl_table=11 ##sequence-region NZ_NPMC01000029.1 1 13726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000029.1 RefSeq region 1 13726 . + . ID=NZ_NPMC01000029.1:1..13726;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000029.1 RefSeq pseudogene 131 1237 . + . ID=gene-CCO57_RS23720;Name=CCO57_RS23720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23720;old_locus_tag=CCO57_23680;partial=true;pseudo=true;start_range=.,131 NZ_NPMC01000029.1 Protein Homology CDS 131 1237 . + 0 ID=cds-CCO57_RS23720;Parent=gene-CCO57_RS23720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012123989.1;locus_tag=CCO57_RS23720;partial=true;product=integrase domain-containing protein;pseudo=true;start_range=.,131;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 1250 3907 . - . ID=gene-CCO57_RS23725;Name=CCO57_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23725;old_locus_tag=CCO57_23685 NZ_NPMC01000029.1 Protein Homology CDS 1250 3907 . - 0 ID=cds-WP_094915203.1;Parent=gene-CCO57_RS23725;Dbxref=GenBank:WP_094915203.1;Name=WP_094915203.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012492.6;locus_tag=CCO57_RS23725;product=DEAD/DEAH box helicase;protein_id=WP_094915203.1;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 3930 4877 . - . ID=gene-CCO57_RS23730;Name=CCO57_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23730;old_locus_tag=CCO57_23690 NZ_NPMC01000029.1 Protein Homology CDS 3930 4877 . - 0 ID=cds-WP_023323619.1;Parent=gene-CCO57_RS23730;Dbxref=GenBank:WP_023323619.1;Name=WP_023323619.1;Ontology_term=GO:0051607;gbkey=CDS;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459909.1;locus_tag=CCO57_RS23730;product=HamA C-terminal domain-containing protein;protein_id=WP_023323619.1;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 5188 5751 . - . ID=gene-CCO57_RS23740;Name=CCO57_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23740;old_locus_tag=CCO57_23700 NZ_NPMC01000029.1 Protein Homology CDS 5188 5751 . - 0 ID=cds-WP_094915204.1;Parent=gene-CCO57_RS23740;Dbxref=GenBank:WP_094915204.1;Name=WP_094915204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134158.1;locus_tag=CCO57_RS23740;product=phage polarity suppression protein;protein_id=WP_094915204.1;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 5780 5998 . - . ID=gene-CCO57_RS23745;Name=CCO57_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23745;old_locus_tag=CCO57_23705 NZ_NPMC01000029.1 Protein Homology CDS 5780 5998 . - 0 ID=cds-WP_017694459.1;Parent=gene-CCO57_RS23745;Dbxref=GenBank:WP_017694459.1;Name=WP_017694459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095389.1;locus_tag=CCO57_RS23745;product=ogr/Delta-like zinc finger family protein;protein_id=WP_017694459.1;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 6002 6745 . - . ID=gene-CCO57_RS23750;Name=CCO57_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23750;old_locus_tag=CCO57_23710 NZ_NPMC01000029.1 Protein Homology CDS 6002 6745 . - 0 ID=cds-WP_094915205.1;Parent=gene-CCO57_RS23750;Dbxref=GenBank:WP_094915205.1;Name=WP_094915205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572538.1;locus_tag=CCO57_RS23750;product=capsid protein;protein_id=WP_094915205.1;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 7272 7538 . + . ID=gene-CCO57_RS23755;Name=CCO57_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23755;old_locus_tag=CCO57_23715 NZ_NPMC01000029.1 Protein Homology CDS 7272 7538 . + 0 ID=cds-WP_023165627.1;Parent=gene-CCO57_RS23755;Dbxref=GenBank:WP_023165627.1;Name=WP_023165627.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224849.1;locus_tag=CCO57_RS23755;product=helix-turn-helix transcriptional regulator;protein_id=WP_023165627.1;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 7535 8092 . + . ID=gene-CCO57_RS23760;Name=CCO57_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23760;old_locus_tag=CCO57_23720 NZ_NPMC01000029.1 Protein Homology CDS 7535 8092 . + 0 ID=cds-WP_094915206.1;Parent=gene-CCO57_RS23760;Dbxref=GenBank:WP_094915206.1;Name=WP_094915206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136111.1;locus_tag=CCO57_RS23760;product=host cell division inhibitor Icd-like protein;protein_id=WP_094915206.1;transl_table=11 NZ_NPMC01000029.1 RefSeq pseudogene 8089 8316 . + . ID=gene-CCO57_RS23765;Name=CCO57_RS23765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23765;old_locus_tag=CCO57_23725;pseudo=true NZ_NPMC01000029.1 Protein Homology CDS 8089 8316 . + 0 ID=cds-CCO57_RS23765;Parent=gene-CCO57_RS23765;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216597.1;locus_tag=CCO57_RS23765;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 8313 8633 . + . ID=gene-CCO57_RS23770;Name=CCO57_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23770;old_locus_tag=CCO57_23730 NZ_NPMC01000029.1 Protein Homology CDS 8313 8633 . + 0 ID=cds-WP_094915207.1;Parent=gene-CCO57_RS23770;Dbxref=GenBank:WP_094915207.1;Name=WP_094915207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224852.1;locus_tag=CCO57_RS23770;product=DUF5375 domain-containing protein;protein_id=WP_094915207.1;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 8648 10981 . + . ID=gene-CCO57_RS23775;Name=CCO57_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23775;old_locus_tag=CCO57_23735 NZ_NPMC01000029.1 Protein Homology CDS 8648 10981 . + 0 ID=cds-WP_094915208.1;Parent=gene-CCO57_RS23775;Dbxref=GenBank:WP_094915208.1;Name=WP_094915208.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224853.1;locus_tag=CCO57_RS23775;product=primase-helicase zinc-binding domain-containing protein;protein_id=WP_094915208.1;transl_table=11 NZ_NPMC01000029.1 RefSeq pseudogene 11728 11950 . - . ID=gene-CCO57_RS24775;Name=CCO57_RS24775;end_range=11950,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24775;old_locus_tag=CCO57_23750;partial=true;pseudo=true;start_range=.,11728 NZ_NPMC01000029.1 Protein Homology CDS 11728 11950 . - 0 ID=cds-CCO57_RS24775;Parent=gene-CCO57_RS24775;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11950,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784655.1;locus_tag=CCO57_RS24775;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,11728;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 11978 12517 . - . ID=gene-CCO57_RS23795;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=CCO57_RS23795;old_locus_tag=CCO57_23755 NZ_NPMC01000029.1 Protein Homology CDS 11978 12517 . - 0 ID=cds-WP_024150546.1;Parent=gene-CCO57_RS23795;Dbxref=GenBank:WP_024150546.1;Name=WP_024150546.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=CCO57_RS23795;product=phase 1 flagellin gene repressor FljA;protein_id=WP_024150546.1;transl_table=11 NZ_NPMC01000029.1 RefSeq gene 12585 13726 . - . ID=gene-CCO57_RS23800;Name=CCO57_RS23800;end_range=13726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23800;old_locus_tag=CCO57_23760;partial=true NZ_NPMC01000029.1 Protein Homology CDS 12585 13726 . - 2 ID=cds-WP_094915209.1;Parent=gene-CCO57_RS23800;Dbxref=GenBank:WP_094915209.1;Name=WP_094915209.1;Ontology_term=GO:0071973,GO:0005198;end_range=13726,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=CCO57_RS23800;partial=true;product=flagellin;protein_id=WP_094915209.1;transl_table=11 ##sequence-region NZ_NPMC01000003.1 1 393523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000003.1 RefSeq region 1 393523 . + . ID=NZ_NPMC01000003.1:1..393523;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000003.1 RefSeq gene 1 296 . + . ID=gene-CCO57_RS05520;Name=CCO57_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05520;old_locus_tag=CCO57_05510;partial=true;start_range=.,1 NZ_NPMC01000003.1 Protein Homology CDS 1 296 . + 2 ID=cds-WP_140428173.1;Parent=gene-CCO57_RS05520;Dbxref=GenBank:WP_140428173.1;Name=WP_140428173.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO57_RS05520;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_140428173.1;start_range=.,1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 418 1644 . + . ID=gene-CCO57_RS05525;Name=CCO57_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05525;old_locus_tag=CCO57_05515 NZ_NPMC01000003.1 Protein Homology CDS 418 1644 . + 0 ID=cds-WP_023213162.1;Parent=gene-CCO57_RS05525;Dbxref=GenBank:WP_023213162.1;Name=WP_023213162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=CCO57_RS05525;product=DUF3748 domain-containing protein;protein_id=WP_023213162.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 1646 1978 . - . ID=gene-CCO57_RS05530;Name=CCO57_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05530;old_locus_tag=CCO57_05520 NZ_NPMC01000003.1 Protein Homology CDS 1646 1978 . - 0 ID=cds-WP_001543704.1;Parent=gene-CCO57_RS05530;Dbxref=GenBank:WP_001543704.1;Name=WP_001543704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=CCO57_RS05530;product=YceK/YidQ family lipoprotein;protein_id=WP_001543704.1;transl_table=11 NZ_NPMC01000003.1 cmsearch sequence_feature 2221 2294 . + . ID=id-NZ_NPMC01000003.1:2221..2294;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMC01000003.1 RefSeq gene 2288 2701 . + . ID=gene-CCO57_RS05535;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=CCO57_RS05535;old_locus_tag=CCO57_05525 NZ_NPMC01000003.1 Protein Homology CDS 2288 2701 . + 0 ID=cds-WP_001532742.1;Parent=gene-CCO57_RS05535;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=CCO57_RS05535;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 2811 3239 . + . ID=gene-CCO57_RS05540;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=CCO57_RS05540;old_locus_tag=CCO57_05530 NZ_NPMC01000003.1 Protein Homology CDS 2811 3239 . + 0 ID=cds-WP_001246919.1;Parent=gene-CCO57_RS05540;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=CCO57_RS05540;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 3428 5089 . + . ID=gene-CCO57_RS05545;Name=CCO57_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05545;old_locus_tag=CCO57_05535 NZ_NPMC01000003.1 Protein Homology CDS 3428 5089 . + 0 ID=cds-WP_001279793.1;Parent=gene-CCO57_RS05545;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=CCO57_RS05545;product=putative transporter;protein_id=WP_001279793.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 5532 5879 . + . ID=gene-CCO57_RS05550;Name=CCO57_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05550;old_locus_tag=CCO57_05540 NZ_NPMC01000003.1 Protein Homology CDS 5532 5879 . + 0 ID=cds-WP_000703964.1;Parent=gene-CCO57_RS05550;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=CCO57_RS05550;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 5869 6231 . + . ID=gene-CCO57_RS05555;Name=CCO57_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05555;old_locus_tag=CCO57_05545 NZ_NPMC01000003.1 Protein Homology CDS 5869 6231 . + 0 ID=cds-WP_001113453.1;Parent=gene-CCO57_RS05555;Dbxref=GenBank:WP_001113453.1;Name=WP_001113453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=CCO57_RS05555;product=DUF202 domain-containing protein;protein_id=WP_001113453.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 6228 6758 . + . ID=gene-CCO57_RS05560;Name=CCO57_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05560;old_locus_tag=CCO57_05550 NZ_NPMC01000003.1 Protein Homology CDS 6228 6758 . + 0 ID=cds-WP_063916959.1;Parent=gene-CCO57_RS05560;Dbxref=GenBank:WP_063916959.1;Name=WP_063916959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=CCO57_RS05560;product=radical SAM protein;protein_id=WP_063916959.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 6840 8162 . - . ID=gene-CCO57_RS05565;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=CCO57_RS05565;old_locus_tag=CCO57_05555 NZ_NPMC01000003.1 Protein Homology CDS 6840 8162 . - 0 ID=cds-WP_000427988.1;Parent=gene-CCO57_RS05565;Dbxref=GenBank:WP_000427988.1;Name=WP_000427988.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=CCO57_RS05565;product=D-serine ammonia-lyase;protein_id=WP_000427988.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 8180 9517 . - . ID=gene-CCO57_RS05570;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=CCO57_RS05570;old_locus_tag=CCO57_05560 NZ_NPMC01000003.1 Protein Homology CDS 8180 9517 . - 0 ID=cds-WP_000543314.1;Parent=gene-CCO57_RS05570;Dbxref=GenBank:WP_000543314.1;Name=WP_000543314.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=CCO57_RS05570;product=D-serine transporter DsdX;protein_id=WP_000543314.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 9743 10666 . + . ID=gene-CCO57_RS05575;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=CCO57_RS05575;old_locus_tag=CCO57_05565 NZ_NPMC01000003.1 Protein Homology CDS 9743 10666 . + 0 ID=cds-WP_079982183.1;Parent=gene-CCO57_RS05575;Dbxref=GenBank:WP_079982183.1;Name=WP_079982183.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=CCO57_RS05575;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_079982183.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 10730 11815 . + . ID=gene-CCO57_RS05580;Name=CCO57_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05580;old_locus_tag=CCO57_05570 NZ_NPMC01000003.1 Protein Homology CDS 10730 11815 . + 0 ID=cds-WP_079982165.1;Parent=gene-CCO57_RS05580;Dbxref=GenBank:WP_079982165.1;Name=WP_079982165.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=CCO57_RS05580;product=cellulase family glycosylhydrolase;protein_id=WP_079982165.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 11742 12926 . - . ID=gene-CCO57_RS05585;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=CCO57_RS05585;old_locus_tag=CCO57_05575 NZ_NPMC01000003.1 Protein Homology CDS 11742 12926 . - 0 ID=cds-WP_000828737.1;Parent=gene-CCO57_RS05585;Dbxref=GenBank:WP_000828737.1;Name=WP_000828737.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=CCO57_RS05585;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828737.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 13129 13989 . - . ID=gene-CCO57_RS05590;Name=CCO57_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05590;old_locus_tag=CCO57_05580 NZ_NPMC01000003.1 Protein Homology CDS 13129 13989 . - 0 ID=cds-WP_076018258.1;Parent=gene-CCO57_RS05590;Dbxref=GenBank:WP_076018258.1;Name=WP_076018258.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=CCO57_RS05590;product=DMT family transporter;protein_id=WP_076018258.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 14082 14171 . - . ID=gene-CCO57_RS05595;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=CCO57_RS05595;old_locus_tag=CCO57_05585 NZ_NPMC01000003.1 Protein Homology CDS 14082 14171 . - 0 ID=cds-WP_000117642.1;Parent=gene-CCO57_RS05595;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=CCO57_RS05595;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_NPMC01000003.1 RefSeq pseudogene 14168 14282 . - . ID=gene-CCO57_RS24060;Name=CCO57_RS24060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24060;pseudo=true NZ_NPMC01000003.1 Protein Homology CDS 14168 14282 . - 0 ID=cds-CCO57_RS24060;Parent=gene-CCO57_RS24060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=CCO57_RS24060;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 14805 14903 . + . ID=gene-CCO57_RS05605;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=CCO57_RS05605;old_locus_tag=CCO57_05595 NZ_NPMC01000003.1 Protein Homology CDS 14805 14903 . + 0 ID=cds-WP_001541152.1;Parent=gene-CCO57_RS05605;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=CCO57_RS05605;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 15010 16698 . + . ID=gene-CCO57_RS05610;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CCO57_RS05610;old_locus_tag=CCO57_05600 NZ_NPMC01000003.1 Protein Homology CDS 15010 16698 . + 0 ID=cds-WP_000168439.1;Parent=gene-CCO57_RS05610;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=CCO57_RS05610;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 16702 16992 . + . ID=gene-CCO57_RS05615;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO57_RS05615;old_locus_tag=CCO57_05605 NZ_NPMC01000003.1 Protein Homology CDS 16702 16992 . + 0 ID=cds-WP_001171826.1;Parent=gene-CCO57_RS05615;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=CCO57_RS05615;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 16994 17779 . - . ID=gene-CCO57_RS05620;Name=CCO57_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05620;old_locus_tag=CCO57_05610 NZ_NPMC01000003.1 Protein Homology CDS 16994 17779 . - 0 ID=cds-WP_000448643.1;Parent=gene-CCO57_RS05620;Dbxref=GenBank:WP_000448643.1;Name=WP_000448643.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=CCO57_RS05620;product=DeoR family transcriptional regulator;protein_id=WP_000448643.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 18104 19024 . + . ID=gene-CCO57_RS05625;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO57_RS05625;old_locus_tag=CCO57_05615 NZ_NPMC01000003.1 Protein Homology CDS 18104 19024 . + 0 ID=cds-WP_000350272.1;Parent=gene-CCO57_RS05625;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=CCO57_RS05625;product=ribokinase;protein_id=WP_000350272.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 19055 20371 . + . ID=gene-CCO57_RS05630;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO57_RS05630;old_locus_tag=CCO57_05620 NZ_NPMC01000003.1 Protein Homology CDS 19055 20371 . + 0 ID=cds-WP_000998359.1;Parent=gene-CCO57_RS05630;Dbxref=GenBank:WP_000998359.1;Name=WP_000998359.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=CCO57_RS05630;product=L-fucose:H+ symporter permease;protein_id=WP_000998359.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 20383 21396 . + . ID=gene-CCO57_RS05635;Name=CCO57_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05635;old_locus_tag=CCO57_05625 NZ_NPMC01000003.1 Protein Homology CDS 20383 21396 . + 0 ID=cds-WP_001631358.1;Parent=gene-CCO57_RS05635;Dbxref=GenBank:WP_001631358.1;Name=WP_001631358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=CCO57_RS05635;product=aldose 1-epimerase family protein;protein_id=WP_001631358.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 21471 22061 . + . ID=gene-CCO57_RS05640;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=CCO57_RS05640;old_locus_tag=CCO57_05630 NZ_NPMC01000003.1 Protein Homology CDS 21471 22061 . + 0 ID=cds-WP_000633672.1;Parent=gene-CCO57_RS05640;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=CCO57_RS05640;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 22061 23563 . + . ID=gene-CCO57_RS05645;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=CCO57_RS05645;old_locus_tag=CCO57_05635 NZ_NPMC01000003.1 Protein Homology CDS 22061 23563 . + 0 ID=cds-WP_001091247.1;Parent=gene-CCO57_RS05645;Dbxref=GenBank:WP_001091247.1;Name=WP_001091247.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=CCO57_RS05645;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001091247.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 23573 24901 . + . ID=gene-CCO57_RS05650;Name=CCO57_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05650;old_locus_tag=CCO57_05640 NZ_NPMC01000003.1 Protein Homology CDS 23573 24901 . + 0 ID=cds-WP_000948174.1;Parent=gene-CCO57_RS05650;Dbxref=GenBank:WP_000948174.1;Name=WP_000948174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=CCO57_RS05650;product=MFS transporter;protein_id=WP_000948174.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 25044 26435 . + . ID=gene-CCO57_RS05655;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CCO57_RS05655;old_locus_tag=CCO57_05645 NZ_NPMC01000003.1 Protein Homology CDS 25044 26435 . + 0 ID=cds-WP_000879181.1;Parent=gene-CCO57_RS05655;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=CCO57_RS05655;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 26628 27080 . + . ID=gene-CCO57_RS05660;Name=CCO57_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05660;old_locus_tag=CCO57_05650 NZ_NPMC01000003.1 Protein Homology CDS 26628 27080 . + 0 ID=cds-WP_001519640.1;Parent=gene-CCO57_RS05660;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=CCO57_RS05660;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 27433 28176 . + . ID=gene-CCO57_RS05665;Name=CCO57_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05665;old_locus_tag=CCO57_05655 NZ_NPMC01000003.1 Protein Homology CDS 27433 28176 . + 0 ID=cds-WP_000854957.1;Parent=gene-CCO57_RS05665;Dbxref=GenBank:WP_000854957.1;Name=WP_000854957.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=CCO57_RS05665;product=GntR family transcriptional regulator;protein_id=WP_000854957.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 28194 28667 . + . ID=gene-CCO57_RS05670;Name=CCO57_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05670;old_locus_tag=CCO57_05660 NZ_NPMC01000003.1 Protein Homology CDS 28194 28667 . + 0 ID=cds-WP_001152234.1;Parent=gene-CCO57_RS05670;Dbxref=GenBank:WP_001152234.1;Name=WP_001152234.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=CCO57_RS05670;product=PTS sugar transporter subunit IIA;protein_id=WP_001152234.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 28664 28951 . + . ID=gene-CCO57_RS05675;Name=CCO57_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05675;old_locus_tag=CCO57_05665 NZ_NPMC01000003.1 Protein Homology CDS 28664 28951 . + 0 ID=cds-WP_000041396.1;Parent=gene-CCO57_RS05675;Dbxref=GenBank:WP_000041396.1;Name=WP_000041396.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=CCO57_RS05675;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 29027 30385 . + . ID=gene-CCO57_RS05680;Name=CCO57_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05680;old_locus_tag=CCO57_05670 NZ_NPMC01000003.1 Protein Homology CDS 29027 30385 . + 0 ID=cds-WP_000997827.1;Parent=gene-CCO57_RS05680;Dbxref=GenBank:WP_000997827.1;Name=WP_000997827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=CCO57_RS05680;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997827.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 30378 31862 . + . ID=gene-CCO57_RS05685;Name=CCO57_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05685;old_locus_tag=CCO57_05675 NZ_NPMC01000003.1 Protein Homology CDS 30378 31862 . + 0 ID=cds-WP_023213165.1;Parent=gene-CCO57_RS05685;Dbxref=GenBank:WP_023213165.1;Name=WP_023213165.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=CCO57_RS05685;product=FGGY-family carbohydrate kinase;protein_id=WP_023213165.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 31925 32785 . + . ID=gene-CCO57_RS05690;Name=CCO57_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05690;old_locus_tag=CCO57_05680 NZ_NPMC01000003.1 Protein Homology CDS 31925 32785 . + 0 ID=cds-WP_001131798.1;Parent=gene-CCO57_RS05690;Dbxref=GenBank:WP_001131798.1;Name=WP_001131798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=CCO57_RS05690;product=class II aldolase;protein_id=WP_001131798.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 32795 33064 . + . ID=gene-CCO57_RS05695;Name=CCO57_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05695;old_locus_tag=CCO57_05685 NZ_NPMC01000003.1 Protein Homology CDS 32795 33064 . + 0 ID=cds-WP_000621026.1;Parent=gene-CCO57_RS05695;Dbxref=GenBank:WP_000621026.1;Name=WP_000621026.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=CCO57_RS05695;product=HPr family phosphocarrier protein;protein_id=WP_000621026.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 33226 33387 . + . ID=gene-CCO57_RS24300;Name=CCO57_RS24300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24300 NZ_NPMC01000003.1 Protein Homology CDS 33226 33387 . + 0 ID=cds-WP_000343619.1;Parent=gene-CCO57_RS24300;Dbxref=GenBank:WP_000343619.1;Name=WP_000343619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343619.1;locus_tag=CCO57_RS24300;product=hypothetical protein;protein_id=WP_000343619.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 33415 34194 . - . ID=gene-CCO57_RS05700;Name=CCO57_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05700;old_locus_tag=CCO57_05690 NZ_NPMC01000003.1 Protein Homology CDS 33415 34194 . - 0 ID=cds-WP_000353909.1;Parent=gene-CCO57_RS05700;Dbxref=GenBank:WP_000353909.1;Name=WP_000353909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912948.1;locus_tag=CCO57_RS05700;product=LEM-3-like GIY-YIG domain-containing protein;protein_id=WP_000353909.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 34379 34702 . - . ID=gene-CCO57_RS05705;Name=CCO57_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05705;old_locus_tag=CCO57_05695 NZ_NPMC01000003.1 Protein Homology CDS 34379 34702 . - 0 ID=cds-WP_001274841.1;Parent=gene-CCO57_RS05705;Dbxref=GenBank:WP_001274841.1;Name=WP_001274841.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=CCO57_RS05705;product=helix-turn-helix domain-containing protein;protein_id=WP_001274841.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 34686 35045 . - . ID=gene-CCO57_RS05710;Name=CCO57_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05710;old_locus_tag=CCO57_05700 NZ_NPMC01000003.1 Protein Homology CDS 34686 35045 . - 0 ID=cds-WP_023214552.1;Parent=gene-CCO57_RS05710;Dbxref=GenBank:WP_023214552.1;Name=WP_023214552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=CCO57_RS05710;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_023214552.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 35261 36454 . + . ID=gene-CCO57_RS05715;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=CCO57_RS05715;old_locus_tag=CCO57_05705 NZ_NPMC01000003.1 Protein Homology CDS 35261 36454 . + 0 ID=cds-WP_001004800.1;Parent=gene-CCO57_RS05715;Dbxref=GenBank:WP_001004800.1;Name=WP_001004800.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=CCO57_RS05715;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004800.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 36514 37896 . - . ID=gene-CCO57_RS05720;Name=CCO57_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05720;old_locus_tag=CCO57_05710 NZ_NPMC01000003.1 Protein Homology CDS 36514 37896 . - 0 ID=cds-WP_023214553.1;Parent=gene-CCO57_RS05720;Dbxref=GenBank:WP_023214553.1;Name=WP_023214553.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=CCO57_RS05720;product=glycoside hydrolase family 1 protein;protein_id=WP_023214553.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 38002 38295 . - . ID=gene-CCO57_RS05725;Name=CCO57_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05725;old_locus_tag=CCO57_05715 NZ_NPMC01000003.1 Protein Homology CDS 38002 38295 . - 0 ID=cds-WP_000824213.1;Parent=gene-CCO57_RS05725;Dbxref=GenBank:WP_000824213.1;Name=WP_000824213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=CCO57_RS05725;product=YicS family protein;protein_id=WP_000824213.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 38492 41290 . + . ID=gene-CCO57_RS05730;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=CCO57_RS05730;old_locus_tag=CCO57_05720 NZ_NPMC01000003.1 Protein Homology CDS 38492 41290 . + 0 ID=cds-WP_001252680.1;Parent=gene-CCO57_RS05730;Dbxref=GenBank:WP_001252680.1;Name=WP_001252680.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=CCO57_RS05730;product=transcriptional regulator DagR;protein_id=WP_001252680.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 41509 41934 . + . ID=gene-CCO57_RS05735;Name=CCO57_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05735;old_locus_tag=CCO57_05725 NZ_NPMC01000003.1 Protein Homology CDS 41509 41934 . + 0 ID=cds-WP_000214106.1;Parent=gene-CCO57_RS05735;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=CCO57_RS05735;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 41945 42430 . + . ID=gene-CCO57_RS05740;Name=CCO57_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05740;old_locus_tag=CCO57_05730 NZ_NPMC01000003.1 Protein Homology CDS 41945 42430 . + 0 ID=cds-WP_001284295.1;Parent=gene-CCO57_RS05740;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=CCO57_RS05740;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 42576 43325 . + . ID=gene-CCO57_RS05745;Name=CCO57_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05745;old_locus_tag=CCO57_05735 NZ_NPMC01000003.1 Protein Homology CDS 42576 43325 . + 0 ID=cds-WP_000380259.1;Parent=gene-CCO57_RS05745;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=CCO57_RS05745;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 43322 44182 . + . ID=gene-CCO57_RS05750;Name=CCO57_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05750;old_locus_tag=CCO57_05740 NZ_NPMC01000003.1 Protein Homology CDS 43322 44182 . + 0 ID=cds-WP_001526325.1;Parent=gene-CCO57_RS05750;Dbxref=GenBank:WP_001526325.1;Name=WP_001526325.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=CCO57_RS05750;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001526325.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 44186 45295 . + . ID=gene-CCO57_RS05755;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=CCO57_RS05755;old_locus_tag=CCO57_05745 NZ_NPMC01000003.1 Protein Homology CDS 44186 45295 . + 0 ID=cds-WP_023214554.1;Parent=gene-CCO57_RS05755;Dbxref=GenBank:WP_023214554.1;Name=WP_023214554.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=CCO57_RS05755;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_023214554.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 45282 46025 . + . ID=gene-CCO57_RS05760;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO57_RS05760;old_locus_tag=CCO57_05750 NZ_NPMC01000003.1 Protein Homology CDS 45282 46025 . + 0 ID=cds-WP_023212122.1;Parent=gene-CCO57_RS05760;Dbxref=GenBank:WP_023212122.1;Name=WP_023212122.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=CCO57_RS05760;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_023212122.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 46261 47214 . + . ID=gene-CCO57_RS05765;Name=CCO57_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05765;old_locus_tag=CCO57_05755 NZ_NPMC01000003.1 Protein Homology CDS 46261 47214 . + 0 ID=cds-WP_094914849.1;Parent=gene-CCO57_RS05765;Dbxref=GenBank:WP_094914849.1;Name=WP_094914849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=CCO57_RS05765;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_094914849.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 47257 48159 . - . ID=gene-CCO57_RS05770;Name=CCO57_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05770;old_locus_tag=CCO57_05760 NZ_NPMC01000003.1 Protein Homology CDS 47257 48159 . - 0 ID=cds-WP_000535970.1;Parent=gene-CCO57_RS05770;Dbxref=GenBank:WP_000535970.1;Name=WP_000535970.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=CCO57_RS05770;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 48666 49361 . + . ID=gene-CCO57_RS05775;Name=CCO57_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05775;old_locus_tag=CCO57_05765 NZ_NPMC01000003.1 Protein Homology CDS 48666 49361 . + 0 ID=cds-WP_000392692.1;Parent=gene-CCO57_RS05775;Dbxref=GenBank:WP_000392692.1;Name=WP_000392692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=CCO57_RS05775;product=MgtC family protein;protein_id=WP_000392692.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 49580 52306 . + . ID=gene-CCO57_RS05780;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO57_RS05780;old_locus_tag=CCO57_05770 NZ_NPMC01000003.1 Protein Homology CDS 49580 52306 . + 0 ID=cds-WP_094888344.1;Parent=gene-CCO57_RS05780;Dbxref=GenBank:WP_094888344.1;Name=WP_094888344.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=CCO57_RS05780;product=magnesium-translocating P-type ATPase;protein_id=WP_094888344.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 52328 52420 . + . ID=gene-CCO57_RS05785;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=CCO57_RS05785;old_locus_tag=CCO57_05775 NZ_NPMC01000003.1 Protein Homology CDS 52328 52420 . + 0 ID=cds-WP_001082118.1;Parent=gene-CCO57_RS05785;Dbxref=GenBank:WP_001082118.1;Name=WP_001082118.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082119.1;locus_tag=CCO57_RS05785;product=protein MgtR;protein_id=WP_001082118.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 52433 52519 . + . ID=gene-CCO57_RS24795;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=CCO57_RS24795 NZ_NPMC01000003.1 Protein Homology CDS 52433 52519 . + 0 ID=cds-WP_252515021.1;Parent=gene-CCO57_RS24795;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=CCO57_RS24795;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 52621 53100 . + . ID=gene-CCO57_RS05790;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=CCO57_RS05790;old_locus_tag=CCO57_05780 NZ_NPMC01000003.1 Protein Homology CDS 52621 53100 . + 0 ID=cds-WP_001065322.1;Parent=gene-CCO57_RS05790;Dbxref=GenBank:WP_001065322.1;Name=WP_001065322.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=CCO57_RS05790;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065322.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 53263 53943 . - . ID=gene-CCO57_RS05800;Name=CCO57_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05800;old_locus_tag=CCO57_05790 NZ_NPMC01000003.1 Protein Homology CDS 53263 53943 . - 0 ID=cds-WP_000106461.1;Parent=gene-CCO57_RS05800;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=CCO57_RS05800;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 54728 55585 . + . ID=gene-CCO57_RS05810;Name=CCO57_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05810;old_locus_tag=CCO57_05800 NZ_NPMC01000003.1 Protein Homology CDS 54728 55585 . + 0 ID=cds-WP_094888345.1;Parent=gene-CCO57_RS05810;Dbxref=GenBank:WP_094888345.1;Name=WP_094888345.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=CCO57_RS05810;product=winged helix-turn-helix domain-containing protein;protein_id=WP_094888345.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 55596 56060 . + . ID=gene-CCO57_RS05815;Name=CCO57_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05815;old_locus_tag=CCO57_05805 NZ_NPMC01000003.1 Protein Homology CDS 55596 56060 . + 0 ID=cds-WP_023213975.1;Parent=gene-CCO57_RS05815;Dbxref=GenBank:WP_023213975.1;Name=WP_023213975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=CCO57_RS05815;product=hypothetical protein;protein_id=WP_023213975.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 56155 59022 . - . ID=gene-CCO57_RS05820;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=CCO57_RS05820;old_locus_tag=CCO57_05810 NZ_NPMC01000003.1 Protein Homology CDS 56155 59022 . - 0 ID=cds-WP_023262790.1;Parent=gene-CCO57_RS05820;Dbxref=GenBank:WP_023262790.1;Name=WP_023262790.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=CCO57_RS05820;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_023262790.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 59097 59714 . - . ID=gene-CCO57_RS05825;Name=CCO57_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05825;old_locus_tag=CCO57_05815 NZ_NPMC01000003.1 Protein Homology CDS 59097 59714 . - 0 ID=cds-WP_000984812.1;Parent=gene-CCO57_RS05825;Dbxref=GenBank:WP_000984812.1;Name=WP_000984812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=CCO57_RS05825;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984812.1;transl_table=11 NZ_NPMC01000003.1 RefSeq pseudogene 60471 60581 . - . ID=gene-CCO57_RS24540;Name=CCO57_RS24540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24540;partial=true;pseudo=true;start_range=.,60471 NZ_NPMC01000003.1 Protein Homology CDS 60471 60581 . - 0 ID=cds-CCO57_RS24540;Parent=gene-CCO57_RS24540;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=CCO57_RS24540;partial=true;product=transposase;pseudo=true;start_range=.,60471;transl_table=11 NZ_NPMC01000003.1 RefSeq pseudogene 60728 60859 . + . ID=gene-CCO57_RS05830;Name=CCO57_RS05830;end_range=60859,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS05830;old_locus_tag=CCO57_05820;partial=true;pseudo=true NZ_NPMC01000003.1 Protein Homology CDS 60728 60859 . + 0 ID=cds-CCO57_RS05830;Parent=gene-CCO57_RS05830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=60859,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611920.1;locus_tag=CCO57_RS05830;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 61019 62041 . - . ID=gene-CCO57_RS05835;Name=CCO57_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05835;old_locus_tag=CCO57_05825 NZ_NPMC01000003.1 Protein Homology CDS 61019 62041 . - 0 ID=cds-WP_001528290.1;Parent=gene-CCO57_RS05835;Dbxref=GenBank:WP_001528290.1;Name=WP_001528290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528290.1;locus_tag=CCO57_RS05835;product=virulence RhuM family protein;protein_id=WP_001528290.1;transl_table=11 NZ_NPMC01000003.1 RefSeq pseudogene 62129 62962 . - . ID=gene-CCO57_RS05840;Name=CCO57_RS05840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS05840;old_locus_tag=CCO57_05830;pseudo=true NZ_NPMC01000003.1 Protein Homology CDS 62129 62962 . - 0 ID=cds-CCO57_RS05840;Parent=gene-CCO57_RS05840;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=CCO57_RS05840;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 63351 63713 . - . ID=gene-CCO57_RS24545;Name=CCO57_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24545 NZ_NPMC01000003.1 Protein Homology CDS 63351 63713 . - 0 ID=cds-WP_223163310.1;Parent=gene-CCO57_RS24545;Dbxref=GenBank:WP_223163310.1;Name=WP_223163310.1;Ontology_term=GO:0051607;gbkey=CDS;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: protein motif:HMM:TIGR02646.1;locus_tag=CCO57_RS24545;product=retron system putative HNH endonuclease;protein_id=WP_223163310.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 64273 64617 . + . ID=gene-CCO57_RS05850;Name=CCO57_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05850;old_locus_tag=CCO57_05840 NZ_NPMC01000003.1 Protein Homology CDS 64273 64617 . + 0 ID=cds-WP_001608859.1;Parent=gene-CCO57_RS05850;Dbxref=GenBank:WP_001608859.1;Name=WP_001608859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=CCO57_RS05850;product=hypothetical protein;protein_id=WP_001608859.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 64935 65029 . - . ID=gene-CCO57_RS05855;Name=CCO57_RS05855;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS05855;old_locus_tag=CCO57_05845 NZ_NPMC01000003.1 tRNAscan-SE tRNA 64935 65029 . - . ID=rna-CCO57_RS05855;Parent=gene-CCO57_RS05855;anticodon=(pos:complement(64993..64995));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS05855;product=tRNA-Sec NZ_NPMC01000003.1 tRNAscan-SE exon 64935 65029 . - . ID=exon-CCO57_RS05855-1;Parent=rna-CCO57_RS05855;anticodon=(pos:complement(64993..64995));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS05855;product=tRNA-Sec NZ_NPMC01000003.1 RefSeq gene 65317 66699 . + . ID=gene-CCO57_RS05860;Name=CCO57_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05860;old_locus_tag=CCO57_05850 NZ_NPMC01000003.1 Protein Homology CDS 65317 66699 . + 0 ID=cds-WP_094888346.1;Parent=gene-CCO57_RS05860;Dbxref=GenBank:WP_094888346.1;Name=WP_094888346.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=CCO57_RS05860;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_094888346.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 66711 69029 . + . ID=gene-CCO57_RS05865;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=CCO57_RS05865;old_locus_tag=CCO57_05855 NZ_NPMC01000003.1 Protein Homology CDS 66711 69029 . + 0 ID=cds-WP_023214558.1;Parent=gene-CCO57_RS05865;Dbxref=GenBank:WP_023214558.1;Name=WP_023214558.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=CCO57_RS05865;product=alpha-xylosidase;protein_id=WP_023214558.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 69132 70841 . - . ID=gene-CCO57_RS05870;Name=CCO57_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05870;old_locus_tag=CCO57_05860 NZ_NPMC01000003.1 Protein Homology CDS 69132 70841 . - 0 ID=cds-WP_000766648.1;Parent=gene-CCO57_RS05870;Dbxref=GenBank:WP_000766648.1;Name=WP_000766648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=CCO57_RS05870;product=AsmA family protein;protein_id=WP_000766648.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 70962 72353 . - . ID=gene-CCO57_RS05875;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=CCO57_RS05875;old_locus_tag=CCO57_05865 NZ_NPMC01000003.1 Protein Homology CDS 70962 72353 . - 0 ID=cds-WP_000115428.1;Parent=gene-CCO57_RS05875;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=CCO57_RS05875;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 72581 73786 . + . ID=gene-CCO57_RS05880;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CCO57_RS05880;old_locus_tag=CCO57_05870 NZ_NPMC01000003.1 Protein Homology CDS 72581 73786 . + 0 ID=cds-WP_000462251.1;Parent=gene-CCO57_RS05880;Dbxref=GenBank:WP_000462251.1;Name=WP_000462251.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462646.1;locus_tag=CCO57_RS05880;product=sodium/glutamate symporter;protein_id=WP_000462251.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 73789 74640 . + . ID=gene-CCO57_RS05885;Name=CCO57_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05885;old_locus_tag=CCO57_05875 NZ_NPMC01000003.1 Protein Homology CDS 73789 74640 . + 0 ID=cds-WP_000745464.1;Parent=gene-CCO57_RS05885;Dbxref=GenBank:WP_000745464.1;Name=WP_000745464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462645.1;locus_tag=CCO57_RS05885;product=hypothetical protein;protein_id=WP_000745464.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 74643 76724 . - . ID=gene-CCO57_RS05890;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CCO57_RS05890;old_locus_tag=CCO57_05880 NZ_NPMC01000003.1 Protein Homology CDS 74643 76724 . - 0 ID=cds-WP_000016757.1;Parent=gene-CCO57_RS05890;Dbxref=GenBank:WP_000016757.1;Name=WP_000016757.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=CCO57_RS05890;product=ATP-dependent DNA helicase RecG;protein_id=WP_000016757.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 76730 77419 . - . ID=gene-CCO57_RS05895;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=CCO57_RS05895;old_locus_tag=CCO57_05885 NZ_NPMC01000003.1 Protein Homology CDS 76730 77419 . - 0 ID=cds-WP_001068433.1;Parent=gene-CCO57_RS05895;Dbxref=GenBank:WP_001068433.1;Name=WP_001068433.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=CCO57_RS05895;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068433.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 77424 79535 . - . ID=gene-CCO57_RS05900;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=CCO57_RS05900;old_locus_tag=CCO57_05890 NZ_NPMC01000003.1 Protein Homology CDS 77424 79535 . - 0 ID=cds-WP_000280481.1;Parent=gene-CCO57_RS05900;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=CCO57_RS05900;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 79554 79829 . - . ID=gene-CCO57_RS05905;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CCO57_RS05905;old_locus_tag=CCO57_05895 NZ_NPMC01000003.1 Protein Homology CDS 79554 79829 . - 0 ID=cds-WP_000135058.1;Parent=gene-CCO57_RS05905;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=CCO57_RS05905;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 79884 80507 . - . ID=gene-CCO57_RS05910;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CCO57_RS05910;old_locus_tag=CCO57_05900 NZ_NPMC01000003.1 Protein Homology CDS 79884 80507 . - 0 ID=cds-WP_000046966.1;Parent=gene-CCO57_RS05910;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=CCO57_RS05910;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 80764 82449 . + . ID=gene-CCO57_RS05915;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=CCO57_RS05915;old_locus_tag=CCO57_05905 NZ_NPMC01000003.1 Protein Homology CDS 80764 82449 . + 0 ID=cds-WP_094914850.1;Parent=gene-CCO57_RS05915;Dbxref=GenBank:WP_094914850.1;Name=WP_094914850.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=CCO57_RS05915;product=NAD-dependent DNA ligase LigB;protein_id=WP_094914850.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 82446 83063 . - . ID=gene-CCO57_RS05920;Name=CCO57_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05920;old_locus_tag=CCO57_05910 NZ_NPMC01000003.1 Protein Homology CDS 82446 83063 . - 0 ID=cds-WP_000924334.1;Parent=gene-CCO57_RS05920;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=CCO57_RS05920;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 83314 84195 . - . ID=gene-CCO57_RS05925;Name=CCO57_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05925;old_locus_tag=CCO57_05915 NZ_NPMC01000003.1 Protein Homology CDS 83314 84195 . - 0 ID=cds-WP_001631316.1;Parent=gene-CCO57_RS05925;Dbxref=GenBank:WP_001631316.1;Name=WP_001631316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=CCO57_RS05925;product=HARLDQ motif MBL-fold protein;protein_id=WP_001631316.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 84269 85171 . + . ID=gene-CCO57_RS05930;Name=CCO57_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05930;old_locus_tag=CCO57_05920 NZ_NPMC01000003.1 Protein Homology CDS 84269 85171 . + 0 ID=cds-WP_023213958.1;Parent=gene-CCO57_RS05930;Dbxref=GenBank:WP_023213958.1;Name=WP_023213958.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=CCO57_RS05930;product=LysR family transcriptional regulator;protein_id=WP_023213958.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 85221 86084 . - . ID=gene-CCO57_RS05935;Name=CCO57_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS05935;old_locus_tag=CCO57_05925 NZ_NPMC01000003.1 Protein Homology CDS 85221 86084 . - 0 ID=cds-WP_000621347.1;Parent=gene-CCO57_RS05935;Dbxref=GenBank:WP_000621347.1;Name=WP_000621347.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=CCO57_RS05935;product=YicC/YloC family endoribonuclease;protein_id=WP_000621347.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 86210 86926 . + . ID=gene-CCO57_RS05945;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=CCO57_RS05945;old_locus_tag=CCO57_05935 NZ_NPMC01000003.1 Protein Homology CDS 86210 86926 . + 0 ID=cds-WP_001247078.1;Parent=gene-CCO57_RS05945;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=CCO57_RS05945;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 87005 87646 . + . ID=gene-CCO57_RS05950;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CCO57_RS05950;old_locus_tag=CCO57_05940 NZ_NPMC01000003.1 Protein Homology CDS 87005 87646 . + 0 ID=cds-WP_094914851.1;Parent=gene-CCO57_RS05950;Dbxref=GenBank:WP_094914851.1;Name=WP_094914851.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=CCO57_RS05950;product=orotate phosphoribosyltransferase;protein_id=WP_094914851.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 87724 88320 . - . ID=gene-CCO57_RS05955;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=CCO57_RS05955;old_locus_tag=CCO57_05945 NZ_NPMC01000003.1 Protein Homology CDS 87724 88320 . - 0 ID=cds-WP_058111730.1;Parent=gene-CCO57_RS05955;Dbxref=GenBank:WP_058111730.1;Name=WP_058111730.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=CCO57_RS05955;product=nucleoid occlusion factor SlmA;protein_id=WP_058111730.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 88428 88886 . - . ID=gene-CCO57_RS05960;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=CCO57_RS05960;old_locus_tag=CCO57_05950 NZ_NPMC01000003.1 Protein Homology CDS 88428 88886 . - 0 ID=cds-WP_000976078.1;Parent=gene-CCO57_RS05960;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=CCO57_RS05960;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 88864 90084 . - . ID=gene-CCO57_RS05965;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CCO57_RS05965;old_locus_tag=CCO57_05955 NZ_NPMC01000003.1 Protein Homology CDS 88864 90084 . - 0 ID=cds-WP_023207694.1;Parent=gene-CCO57_RS05965;Dbxref=GenBank:WP_023207694.1;Name=WP_023207694.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=CCO57_RS05965;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_023207694.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 90260 90925 . + . ID=gene-CCO57_RS05970;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CCO57_RS05970;old_locus_tag=CCO57_05960 NZ_NPMC01000003.1 Protein Homology CDS 90260 90925 . + 0 ID=cds-WP_000380129.1;Parent=gene-CCO57_RS05970;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=CCO57_RS05970;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 91143 91379 . + . ID=gene-CCO57_RS05975;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CCO57_RS05975;old_locus_tag=CCO57_05965 NZ_NPMC01000003.1 Protein Homology CDS 91143 91379 . + 0 ID=cds-WP_001519051.1;Parent=gene-CCO57_RS05975;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=CCO57_RS05975;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 91400 91567 . + . ID=gene-CCO57_RS05980;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CCO57_RS05980;old_locus_tag=CCO57_05970 NZ_NPMC01000003.1 Protein Homology CDS 91400 91567 . + 0 ID=cds-WP_001051798.1;Parent=gene-CCO57_RS05980;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=CCO57_RS05980;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 91665 92474 . + . ID=gene-CCO57_RS05985;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CCO57_RS05985;old_locus_tag=CCO57_05975 NZ_NPMC01000003.1 Protein Homology CDS 91665 92474 . + 0 ID=cds-WP_001114515.1;Parent=gene-CCO57_RS05985;Dbxref=GenBank:WP_001114515.1;Name=WP_001114515.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=CCO57_RS05985;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114515.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 92502 92981 . - . ID=gene-CCO57_RS05990;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CCO57_RS05990;old_locus_tag=CCO57_05980 NZ_NPMC01000003.1 Protein Homology CDS 92502 92981 . - 0 ID=cds-WP_001171884.1;Parent=gene-CCO57_RS05990;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=CCO57_RS05990;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 92990 94267 . - . ID=gene-CCO57_RS05995;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=CCO57_RS05995;old_locus_tag=CCO57_05985 NZ_NPMC01000003.1 Protein Homology CDS 92990 94267 . - 0 ID=cds-WP_000891580.1;Parent=gene-CCO57_RS05995;Dbxref=GenBank:WP_000891580.1;Name=WP_000891580.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=CCO57_RS05995;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891580.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 94676 95746 . + . ID=gene-CCO57_RS06000;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=CCO57_RS06000;old_locus_tag=CCO57_05990 NZ_NPMC01000003.1 Protein Homology CDS 94676 95746 . + 0 ID=cds-WP_001526672.1;Parent=gene-CCO57_RS06000;Dbxref=GenBank:WP_001526672.1;Name=WP_001526672.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=CCO57_RS06000;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001526672.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 95743 96867 . + . ID=gene-CCO57_RS06005;Name=CCO57_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06005;old_locus_tag=CCO57_05995 NZ_NPMC01000003.1 Protein Homology CDS 95743 96867 . + 0 ID=cds-WP_094914852.1;Parent=gene-CCO57_RS06005;Dbxref=GenBank:WP_094914852.1;Name=WP_094914852.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=CCO57_RS06005;product=glycosyltransferase family 4 protein;protein_id=WP_094914852.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 96860 97657 . + . ID=gene-CCO57_RS06010;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=CCO57_RS06010;old_locus_tag=CCO57_06000 NZ_NPMC01000003.1 Protein Homology CDS 96860 97657 . + 0 ID=cds-WP_023195508.1;Parent=gene-CCO57_RS06010;Dbxref=GenBank:WP_023195508.1;Name=WP_023195508.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=CCO57_RS06010;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_023195508.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 97713 98693 . + . ID=gene-CCO57_RS06015;Name=CCO57_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06015;old_locus_tag=CCO57_06005 NZ_NPMC01000003.1 Protein Homology CDS 97713 98693 . + 0 ID=cds-WP_023197171.1;Parent=gene-CCO57_RS06015;Dbxref=GenBank:WP_023197171.1;Name=WP_023197171.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=CCO57_RS06015;product=glycosyltransferase family 8 protein;protein_id=WP_023197171.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 98707 99786 . + . ID=gene-CCO57_RS06020;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=CCO57_RS06020;old_locus_tag=CCO57_06010 NZ_NPMC01000003.1 Protein Homology CDS 98707 99786 . + 0 ID=cds-WP_001631304.1;Parent=gene-CCO57_RS06020;Dbxref=GenBank:WP_001631304.1;Name=WP_001631304.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=CCO57_RS06020;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_001631304.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 99792 100805 . + . ID=gene-CCO57_RS06025;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=CCO57_RS06025;old_locus_tag=CCO57_06015 NZ_NPMC01000003.1 Protein Homology CDS 99792 100805 . + 0 ID=cds-WP_000088482.1;Parent=gene-CCO57_RS06025;Dbxref=GenBank:WP_000088482.1;Name=WP_000088482.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=CCO57_RS06025;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088482.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 100823 101836 . + . ID=gene-CCO57_RS06030;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=CCO57_RS06030;old_locus_tag=CCO57_06020 NZ_NPMC01000003.1 Protein Homology CDS 100823 101836 . + 0 ID=cds-WP_094914853.1;Parent=gene-CCO57_RS06030;Dbxref=GenBank:WP_094914853.1;Name=WP_094914853.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=CCO57_RS06030;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_094914853.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 101859 102557 . + . ID=gene-CCO57_RS06035;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=CCO57_RS06035;old_locus_tag=CCO57_06025 NZ_NPMC01000003.1 Protein Homology CDS 101859 102557 . + 0 ID=cds-WP_094914854.1;Parent=gene-CCO57_RS06035;Dbxref=GenBank:WP_094914854.1;Name=WP_094914854.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=CCO57_RS06035;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_094914854.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 102703 103512 . + . ID=gene-CCO57_RS06040;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=CCO57_RS06040;old_locus_tag=CCO57_06030 NZ_NPMC01000003.1 Protein Homology CDS 102703 103512 . + 0 ID=cds-WP_000536017.1;Parent=gene-CCO57_RS06040;Dbxref=GenBank:WP_000536017.1;Name=WP_000536017.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=CCO57_RS06040;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536017.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 103612 104757 . + . ID=gene-CCO57_RS06045;Name=CCO57_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06045;old_locus_tag=CCO57_06035 NZ_NPMC01000003.1 Protein Homology CDS 103612 104757 . + 0 ID=cds-WP_000591827.1;Parent=gene-CCO57_RS06045;Dbxref=GenBank:WP_000591827.1;Name=WP_000591827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=CCO57_RS06045;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591827.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 104814 106028 . - . ID=gene-CCO57_RS06050;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=CCO57_RS06050;old_locus_tag=CCO57_06040 NZ_NPMC01000003.1 Protein Homology CDS 104814 106028 . - 0 ID=cds-WP_000958439.1;Parent=gene-CCO57_RS06050;Dbxref=GenBank:WP_000958439.1;Name=WP_000958439.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=CCO57_RS06050;product=O-antigen ligase RfaL;protein_id=WP_000958439.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 106068 107021 . - . ID=gene-CCO57_RS06055;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=CCO57_RS06055;old_locus_tag=CCO57_06045 NZ_NPMC01000003.1 Protein Homology CDS 106068 107021 . - 0 ID=cds-WP_001264612.1;Parent=gene-CCO57_RS06055;Dbxref=GenBank:WP_001264612.1;Name=WP_001264612.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=CCO57_RS06055;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264612.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 107021 108067 . - . ID=gene-CCO57_RS06060;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=CCO57_RS06060;old_locus_tag=CCO57_06050 NZ_NPMC01000003.1 Protein Homology CDS 107021 108067 . - 0 ID=cds-WP_023213299.1;Parent=gene-CCO57_RS06060;Dbxref=GenBank:WP_023213299.1;Name=WP_023213299.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=CCO57_RS06060;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_023213299.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 108070 109002 . - . ID=gene-CCO57_RS06065;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=CCO57_RS06065;old_locus_tag=CCO57_06055 NZ_NPMC01000003.1 Protein Homology CDS 108070 109002 . - 0 ID=cds-WP_000587771.1;Parent=gene-CCO57_RS06065;Dbxref=GenBank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=CCO57_RS06065;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 109205 110401 . + . ID=gene-CCO57_RS06070;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CCO57_RS06070;old_locus_tag=CCO57_06060 NZ_NPMC01000003.1 Protein Homology CDS 109205 110401 . + 0 ID=cds-WP_001213790.1;Parent=gene-CCO57_RS06070;Dbxref=GenBank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=CCO57_RS06070;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 110411 111436 . + . ID=gene-CCO57_RS06075;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=CCO57_RS06075;old_locus_tag=CCO57_06065 NZ_NPMC01000003.1 Protein Homology CDS 110411 111436 . + 0 ID=cds-WP_000645990.1;Parent=gene-CCO57_RS06075;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=CCO57_RS06075;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 111729 112763 . + . ID=gene-CCO57_RS06080;Name=CCO57_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06080;old_locus_tag=CCO57_06070 NZ_NPMC01000003.1 Protein Homology CDS 111729 112763 . + 0 ID=cds-WP_000798190.1;Parent=gene-CCO57_RS06080;Dbxref=GenBank:WP_000798190.1;Name=WP_000798190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=CCO57_RS06080;product=glycosyltransferase;protein_id=WP_000798190.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 112750 113712 . - . ID=gene-CCO57_RS06085;Name=CCO57_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06085;old_locus_tag=CCO57_06075 NZ_NPMC01000003.1 Protein Homology CDS 112750 113712 . - 0 ID=cds-WP_023214563.1;Parent=gene-CCO57_RS06085;Dbxref=GenBank:WP_023214563.1;Name=WP_023214563.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=CCO57_RS06085;product=divergent polysaccharide deacetylase family protein;protein_id=WP_023214563.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 113716 114975 . - . ID=gene-CCO57_RS06090;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=CCO57_RS06090;old_locus_tag=CCO57_06080 NZ_NPMC01000003.1 Protein Homology CDS 113716 114975 . - 0 ID=cds-WP_058814511.1;Parent=gene-CCO57_RS06090;Dbxref=GenBank:WP_058814511.1;Name=WP_058814511.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=CCO57_RS06090;product=murein hydrolase activator EnvC;protein_id=WP_058814511.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 115009 116553 . - . ID=gene-CCO57_RS06095;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=CCO57_RS06095;old_locus_tag=CCO57_06085 NZ_NPMC01000003.1 Protein Homology CDS 115009 116553 . - 0 ID=cds-WP_000116588.1;Parent=gene-CCO57_RS06095;Dbxref=GenBank:WP_000116588.1;Name=WP_000116588.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=CCO57_RS06095;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116588.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 116801 117232 . + . ID=gene-CCO57_RS06100;Name=CCO57_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06100;old_locus_tag=CCO57_06090 NZ_NPMC01000003.1 Protein Homology CDS 116801 117232 . + 0 ID=cds-WP_001156179.1;Parent=gene-CCO57_RS06100;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=CCO57_RS06100;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 117318 117569 . + . ID=gene-CCO57_RS06105;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=CCO57_RS06105;old_locus_tag=CCO57_06095 NZ_NPMC01000003.1 Protein Homology CDS 117318 117569 . + 0 ID=cds-WP_001273795.1;Parent=gene-CCO57_RS06105;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=CCO57_RS06105;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 117613 118080 . + . ID=gene-CCO57_RS06110;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=CCO57_RS06110;old_locus_tag=CCO57_06100 NZ_NPMC01000003.1 Protein Homology CDS 117613 118080 . + 0 ID=cds-WP_000003370.1;Parent=gene-CCO57_RS06110;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=CCO57_RS06110;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 118080 119099 . + . ID=gene-CCO57_RS06115;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=CCO57_RS06115;old_locus_tag=CCO57_06105 NZ_NPMC01000003.1 Protein Homology CDS 118080 119099 . + 0 ID=cds-WP_001076596.1;Parent=gene-CCO57_RS06115;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=CCO57_RS06115;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 119177 119998 . + . ID=gene-CCO57_RS06120;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CCO57_RS06120;old_locus_tag=CCO57_06110 NZ_NPMC01000003.1 Protein Homology CDS 119177 119998 . + 0 ID=cds-WP_001112114.1;Parent=gene-CCO57_RS06120;Dbxref=GenBank:WP_001112114.1;Name=WP_001112114.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=CCO57_RS06120;product=serine O-acetyltransferase;protein_id=WP_001112114.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 120181 120654 . - . ID=gene-CCO57_RS06125;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CCO57_RS06125;old_locus_tag=CCO57_06115 NZ_NPMC01000003.1 Protein Homology CDS 120181 120654 . - 0 ID=cds-WP_001631279.1;Parent=gene-CCO57_RS06125;Dbxref=GenBank:WP_001631279.1;Name=WP_001631279.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=CCO57_RS06125;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_001631279.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 120718 121908 . - . ID=gene-CCO57_RS06130;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=CCO57_RS06130;old_locus_tag=CCO57_06120 NZ_NPMC01000003.1 Protein Homology CDS 120718 121908 . - 0 ID=cds-WP_001635973.1;Parent=gene-CCO57_RS06130;Dbxref=GenBank:WP_001635973.1;Name=WP_001635973.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=CCO57_RS06130;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_001635973.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 121905 122681 . - . ID=gene-CCO57_RS06135;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=CCO57_RS06135;old_locus_tag=CCO57_06125 NZ_NPMC01000003.1 Protein Homology CDS 121905 122681 . - 0 ID=cds-WP_000636700.1;Parent=gene-CCO57_RS06135;Dbxref=GenBank:WP_000636700.1;Name=WP_000636700.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=CCO57_RS06135;product=transcriptional regulator LldR;protein_id=WP_000636700.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 122678 124333 . - . ID=gene-CCO57_RS06140;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=CCO57_RS06140;old_locus_tag=CCO57_06130 NZ_NPMC01000003.1 Protein Homology CDS 122678 124333 . - 0 ID=cds-WP_001055308.1;Parent=gene-CCO57_RS06140;Dbxref=GenBank:WP_001055308.1;Name=WP_001055308.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=CCO57_RS06140;product=L-lactate permease;protein_id=WP_001055308.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 124632 128972 . - . ID=gene-CCO57_RS06145;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=CCO57_RS06145;old_locus_tag=CCO57_06135 NZ_NPMC01000003.1 Protein Homology CDS 124632 128972 . - 0 ID=cds-WP_001079638.1;Parent=gene-CCO57_RS06145;Dbxref=GenBank:WP_001079638.1;Name=WP_001079638.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=CCO57_RS06145;product=trimeric autotransporter adhesin SadA;protein_id=WP_001079638.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 129016 129699 . - . ID=gene-CCO57_RS06150;Name=CCO57_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06150;old_locus_tag=CCO57_06140 NZ_NPMC01000003.1 Protein Homology CDS 129016 129699 . - 0 ID=cds-WP_094914855.1;Parent=gene-CCO57_RS06150;Dbxref=GenBank:WP_094914855.1;Name=WP_094914855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=CCO57_RS06150;product=DUF3251 domain-containing protein;protein_id=WP_094914855.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 130186 130548 . - . ID=gene-CCO57_RS06160;Name=CCO57_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06160;old_locus_tag=CCO57_06150 NZ_NPMC01000003.1 Protein Homology CDS 130186 130548 . - 0 ID=cds-WP_000665687.1;Parent=gene-CCO57_RS06160;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=CCO57_RS06160;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 130839 131048 . + . ID=gene-CCO57_RS06165;Name=CCO57_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06165;old_locus_tag=CCO57_06155 NZ_NPMC01000003.1 Protein Homology CDS 130839 131048 . + 0 ID=cds-WP_001062558.1;Parent=gene-CCO57_RS06165;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=CCO57_RS06165;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 131058 131648 . - . ID=gene-CCO57_RS06170;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=CCO57_RS06170;old_locus_tag=CCO57_06160 NZ_NPMC01000003.1 Protein Homology CDS 131058 131648 . - 0 ID=cds-WP_000193201.1;Parent=gene-CCO57_RS06170;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=CCO57_RS06170;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 131645 132793 . - . ID=gene-CCO57_RS06175;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=CCO57_RS06175;old_locus_tag=CCO57_06165 NZ_NPMC01000003.1 Protein Homology CDS 131645 132793 . - 0 ID=cds-WP_094914856.1;Parent=gene-CCO57_RS06175;Dbxref=GenBank:WP_094914856.1;Name=WP_094914856.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=CCO57_RS06175;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_094914856.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 133014 134930 . - . ID=gene-CCO57_RS06180;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=CCO57_RS06180;old_locus_tag=CCO57_06170 NZ_NPMC01000003.1 Protein Homology CDS 133014 134930 . - 0 ID=cds-WP_000093290.1;Parent=gene-CCO57_RS06180;Dbxref=GenBank:WP_000093290.1;Name=WP_000093290.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=CCO57_RS06180;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093290.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 135406 136014 . + . ID=gene-CCO57_RS06185;Name=CCO57_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06185;old_locus_tag=CCO57_06175 NZ_NPMC01000003.1 Protein Homology CDS 135406 136014 . + 0 ID=cds-WP_000766675.1;Parent=gene-CCO57_RS06185;Dbxref=GenBank:WP_000766675.1;Name=WP_000766675.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=CCO57_RS06185;product=glutathione S-transferase;protein_id=WP_000766675.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 136113 137504 . + . ID=gene-CCO57_RS06190;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=CCO57_RS06190;old_locus_tag=CCO57_06180 NZ_NPMC01000003.1 Protein Homology CDS 136113 137504 . + 0 ID=cds-WP_000200188.1;Parent=gene-CCO57_RS06190;Dbxref=GenBank:WP_000200188.1;Name=WP_000200188.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=CCO57_RS06190;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000200188.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 137501 139351 . + . ID=gene-CCO57_RS06195;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=CCO57_RS06195;old_locus_tag=CCO57_06185 NZ_NPMC01000003.1 Protein Homology CDS 137501 139351 . + 0 ID=cds-WP_000582383.1;Parent=gene-CCO57_RS06195;Dbxref=GenBank:WP_000582383.1;Name=WP_000582383.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=CCO57_RS06195;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582383.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 139537 140688 . + . ID=gene-CCO57_RS06200;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=CCO57_RS06200;old_locus_tag=CCO57_06190 NZ_NPMC01000003.1 Protein Homology CDS 139537 140688 . + 0 ID=cds-WP_000741520.1;Parent=gene-CCO57_RS06200;Dbxref=GenBank:WP_000741520.1;Name=WP_000741520.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026233.1;locus_tag=CCO57_RS06200;product=L-threonine dehydrogenase;protein_id=WP_000741520.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 140760 141641 . - . ID=gene-CCO57_RS06205;Name=CCO57_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06205;old_locus_tag=CCO57_06195 NZ_NPMC01000003.1 Protein Homology CDS 140760 141641 . - 0 ID=cds-WP_001188271.1;Parent=gene-CCO57_RS06205;Dbxref=GenBank:WP_001188271.1;Name=WP_001188271.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=CCO57_RS06205;product=ROK family protein;protein_id=WP_001188271.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 141810 143348 . + . ID=gene-CCO57_RS06210;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=CCO57_RS06210;old_locus_tag=CCO57_06200 NZ_NPMC01000003.1 Protein Homology CDS 141810 143348 . + 0 ID=cds-WP_000183993.1;Parent=gene-CCO57_RS06210;Dbxref=GenBank:WP_000183993.1;Name=WP_000183993.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=CCO57_RS06210;product=aldehyde dehydrogenase AldB;protein_id=WP_000183993.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 143522 145477 . - . ID=gene-CCO57_RS06215;Name=CCO57_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06215;old_locus_tag=CCO57_06205 NZ_NPMC01000003.1 Protein Homology CDS 143522 145477 . - 0 ID=cds-WP_023233432.1;Parent=gene-CCO57_RS06215;Dbxref=GenBank:WP_023233432.1;Name=WP_023233432.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=CCO57_RS06215;product=glycoside hydrolase family 127 protein;protein_id=WP_023233432.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 145741 146556 . + . ID=gene-CCO57_RS06220;Name=CCO57_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06220;old_locus_tag=CCO57_06210 NZ_NPMC01000003.1 Protein Homology CDS 145741 146556 . + 0 ID=cds-WP_000891808.1;Parent=gene-CCO57_RS06220;Dbxref=GenBank:WP_000891808.1;Name=WP_000891808.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=CCO57_RS06220;product=AraC family transcriptional regulator;protein_id=WP_000891808.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 146705 147400 . - . ID=gene-CCO57_RS06225;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO57_RS06225;old_locus_tag=CCO57_06215 NZ_NPMC01000003.1 Protein Homology CDS 146705 147400 . - 0 ID=cds-WP_023213305.1;Parent=gene-CCO57_RS06225;Dbxref=GenBank:WP_023213305.1;Name=WP_023213305.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=CCO57_RS06225;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_023213305.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 147394 148254 . - . ID=gene-CCO57_RS06230;Name=CCO57_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06230;old_locus_tag=CCO57_06220 NZ_NPMC01000003.1 Protein Homology CDS 147394 148254 . - 0 ID=cds-WP_094914857.1;Parent=gene-CCO57_RS06230;Dbxref=GenBank:WP_094914857.1;Name=WP_094914857.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=CCO57_RS06230;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_094914857.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 148259 148909 . - . ID=gene-CCO57_RS06235;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO57_RS06235;old_locus_tag=CCO57_06225 NZ_NPMC01000003.1 Protein Homology CDS 148259 148909 . - 0 ID=cds-WP_000089520.1;Parent=gene-CCO57_RS06235;Dbxref=GenBank:WP_000089520.1;Name=WP_000089520.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089526.1;locus_tag=CCO57_RS06235;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089520.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 148906 150402 . - . ID=gene-CCO57_RS06240;Name=CCO57_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06240;old_locus_tag=CCO57_06230 NZ_NPMC01000003.1 Protein Homology CDS 148906 150402 . - 0 ID=cds-WP_023225557.1;Parent=gene-CCO57_RS06240;Dbxref=GenBank:WP_023225557.1;Name=WP_023225557.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=CCO57_RS06240;product=FGGY-family carbohydrate kinase;protein_id=WP_023225557.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 150406 151392 . - . ID=gene-CCO57_RS06245;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=CCO57_RS06245;old_locus_tag=CCO57_06235 NZ_NPMC01000003.1 Protein Homology CDS 150406 151392 . - 0 ID=cds-WP_079957125.1;Parent=gene-CCO57_RS06245;Dbxref=GenBank:WP_079957125.1;Name=WP_079957125.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=CCO57_RS06245;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_079957125.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 151404 152681 . - . ID=gene-CCO57_RS06250;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=CCO57_RS06250;old_locus_tag=CCO57_06240 NZ_NPMC01000003.1 Protein Homology CDS 151404 152681 . - 0 ID=cds-WP_000301822.1;Parent=gene-CCO57_RS06250;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=CCO57_RS06250;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 152684 153157 . - . ID=gene-CCO57_RS06255;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=CCO57_RS06255;old_locus_tag=CCO57_06245 NZ_NPMC01000003.1 Protein Homology CDS 152684 153157 . - 0 ID=cds-WP_000832313.1;Parent=gene-CCO57_RS06255;Dbxref=GenBank:WP_000832313.1;Name=WP_000832313.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=CCO57_RS06255;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832313.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 153296 154228 . - . ID=gene-CCO57_RS06260;Name=CCO57_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06260;old_locus_tag=CCO57_06250 NZ_NPMC01000003.1 Protein Homology CDS 153296 154228 . - 0 ID=cds-WP_094914858.1;Parent=gene-CCO57_RS06260;Dbxref=GenBank:WP_094914858.1;Name=WP_094914858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528247.1;locus_tag=CCO57_RS06260;product=DUF4862 family protein;protein_id=WP_094914858.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 154252 154716 . - . ID=gene-CCO57_RS06265;Name=CCO57_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06265;old_locus_tag=CCO57_06255 NZ_NPMC01000003.1 Protein Homology CDS 154252 154716 . - 0 ID=cds-WP_000576104.1;Parent=gene-CCO57_RS06265;Dbxref=GenBank:WP_000576104.1;Name=WP_000576104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=CCO57_RS06265;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576104.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 154728 155726 . - . ID=gene-CCO57_RS06270;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=CCO57_RS06270;old_locus_tag=CCO57_06260 NZ_NPMC01000003.1 Protein Homology CDS 154728 155726 . - 0 ID=cds-WP_000869008.1;Parent=gene-CCO57_RS06270;Dbxref=GenBank:WP_000869008.1;Name=WP_000869008.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=CCO57_RS06270;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869008.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 155956 156756 . + . ID=gene-CCO57_RS06275;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=CCO57_RS06275;old_locus_tag=CCO57_06265 NZ_NPMC01000003.1 Protein Homology CDS 155956 156756 . + 0 ID=cds-WP_000081340.1;Parent=gene-CCO57_RS06275;Dbxref=GenBank:WP_000081340.1;Name=WP_000081340.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=CCO57_RS06275;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081340.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 156873 157346 . + . ID=gene-CCO57_RS06280;Name=CCO57_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06280;old_locus_tag=CCO57_06270 NZ_NPMC01000003.1 Protein Homology CDS 156873 157346 . + 0 ID=cds-WP_001078817.1;Parent=gene-CCO57_RS06280;Dbxref=GenBank:WP_001078817.1;Name=WP_001078817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=CCO57_RS06280;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078817.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 157383 158633 . - . ID=gene-CCO57_RS06285;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=CCO57_RS06285;old_locus_tag=CCO57_06275 NZ_NPMC01000003.1 Protein Homology CDS 157383 158633 . - 0 ID=cds-WP_000144384.1;Parent=gene-CCO57_RS06285;Dbxref=GenBank:WP_000144384.1;Name=WP_000144384.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=CCO57_RS06285;product=valine--pyruvate transaminase;protein_id=WP_000144384.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 158807 160834 . - . ID=gene-CCO57_RS06290;Name=CCO57_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06290;old_locus_tag=CCO57_06280 NZ_NPMC01000003.1 Protein Homology CDS 158807 160834 . - 0 ID=cds-WP_023252102.1;Parent=gene-CCO57_RS06290;Dbxref=GenBank:WP_023252102.1;Name=WP_023252102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=CCO57_RS06290;product=alpha-amylase;protein_id=WP_023252102.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 161150 161974 . + . ID=gene-CCO57_RS06295;Name=CCO57_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06295;old_locus_tag=CCO57_06285 NZ_NPMC01000003.1 Protein Homology CDS 161150 161974 . + 0 ID=cds-WP_001562170.1;Parent=gene-CCO57_RS06295;Dbxref=GenBank:WP_001562170.1;Name=WP_001562170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=CCO57_RS06295;product=protein bax;protein_id=WP_001562170.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 162035 163213 . - . ID=gene-CCO57_RS06300;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=CCO57_RS06300;old_locus_tag=CCO57_06290 NZ_NPMC01000003.1 Protein Homology CDS 162035 163213 . - 0 ID=cds-WP_000459824.1;Parent=gene-CCO57_RS06300;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=CCO57_RS06300;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 163576 164898 . + . ID=gene-CCO57_RS06310;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=CCO57_RS06310;old_locus_tag=CCO57_06300 NZ_NPMC01000003.1 Protein Homology CDS 163576 164898 . + 0 ID=cds-WP_001149561.1;Parent=gene-CCO57_RS06310;Dbxref=GenBank:WP_001149561.1;Name=WP_001149561.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=CCO57_RS06310;product=xylose isomerase;protein_id=WP_001149561.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 164998 166452 . + . ID=gene-CCO57_RS06315;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=CCO57_RS06315;old_locus_tag=CCO57_06305 NZ_NPMC01000003.1 Protein Homology CDS 164998 166452 . + 0 ID=cds-WP_023252104.1;Parent=gene-CCO57_RS06315;Dbxref=GenBank:WP_023252104.1;Name=WP_023252104.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=CCO57_RS06315;product=xylulokinase;protein_id=WP_023252104.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 166627 166980 . + . ID=gene-CCO57_RS06320;Name=CCO57_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06320;old_locus_tag=CCO57_06310 NZ_NPMC01000003.1 Protein Homology CDS 166627 166980 . + 0 ID=cds-WP_000340932.1;Parent=gene-CCO57_RS06320;Dbxref=GenBank:WP_000340932.1;Name=WP_000340932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=CCO57_RS06320;product=YiaA/YiaB family protein;protein_id=WP_000340932.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 167001 167996 . - . ID=gene-CCO57_RS06325;Name=CCO57_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06325;old_locus_tag=CCO57_06315 NZ_NPMC01000003.1 Protein Homology CDS 167001 167996 . - 0 ID=cds-WP_001182575.1;Parent=gene-CCO57_RS06325;Dbxref=GenBank:WP_001182575.1;Name=WP_001182575.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=CCO57_RS06325;product=acyltransferase;protein_id=WP_001182575.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 168162 168464 . + . ID=gene-CCO57_RS06335;Name=CCO57_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06335;old_locus_tag=CCO57_06325 NZ_NPMC01000003.1 Protein Homology CDS 168162 168464 . + 0 ID=cds-WP_000605592.1;Parent=gene-CCO57_RS06335;Dbxref=GenBank:WP_000605592.1;Name=WP_000605592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=CCO57_RS06335;product=YsaB family lipoprotein;protein_id=WP_000605592.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 168603 169514 . + . ID=gene-CCO57_RS06340;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=CCO57_RS06340;old_locus_tag=CCO57_06330 NZ_NPMC01000003.1 Protein Homology CDS 168603 169514 . + 0 ID=cds-WP_001168556.1;Parent=gene-CCO57_RS06340;Dbxref=GenBank:WP_001168556.1;Name=WP_001168556.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=CCO57_RS06340;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168556.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 169524 171593 . + . ID=gene-CCO57_RS06345;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=CCO57_RS06345;old_locus_tag=CCO57_06335 NZ_NPMC01000003.1 Protein Homology CDS 169524 171593 . + 0 ID=cds-WP_023252105.1;Parent=gene-CCO57_RS06345;Dbxref=GenBank:WP_023252105.1;Name=WP_023252105.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=CCO57_RS06345;product=glycine--tRNA ligase subunit beta;protein_id=WP_023252105.1;transl_table=11 NZ_NPMC01000003.1 RefSeq pseudogene 171991 172410 . + . ID=gene-CCO57_RS24550;Name=CCO57_RS24550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24550;partial=true;pseudo=true;start_range=.,171991 NZ_NPMC01000003.1 Protein Homology CDS 171991 172410 . + 0 ID=cds-CCO57_RS24550;Parent=gene-CCO57_RS24550;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=CCO57_RS24550;partial=true;product=transposase;pseudo=true;start_range=.,171991;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 172775 173680 . + . ID=gene-CCO57_RS06355;Name=CCO57_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06355;old_locus_tag=CCO57_06345 NZ_NPMC01000003.1 Protein Homology CDS 172775 173680 . + 0 ID=cds-WP_031567314.1;Parent=gene-CCO57_RS06355;Dbxref=GenBank:WP_031567314.1;Name=WP_031567314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952518.1;locus_tag=CCO57_RS06355;product=hypothetical protein;protein_id=WP_031567314.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 174026 174313 . + . ID=gene-CCO57_RS06360;Name=CCO57_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06360;old_locus_tag=CCO57_06350 NZ_NPMC01000003.1 Protein Homology CDS 174026 174313 . + 0 ID=cds-WP_000965886.1;Parent=gene-CCO57_RS06360;Dbxref=GenBank:WP_000965886.1;Name=WP_000965886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=CCO57_RS06360;product=DUF1778 domain-containing protein;protein_id=WP_000965886.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 174301 174786 . + . ID=gene-CCO57_RS06365;Name=CCO57_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06365;old_locus_tag=CCO57_06355 NZ_NPMC01000003.1 Protein Homology CDS 174301 174786 . + 0 ID=cds-WP_000533907.1;Parent=gene-CCO57_RS06365;Dbxref=GenBank:WP_000533907.1;Name=WP_000533907.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=CCO57_RS06365;product=GNAT family N-acetyltransferase;protein_id=WP_000533907.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 175157 175696 . - . ID=gene-CCO57_RS06370;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=CCO57_RS06370;old_locus_tag=CCO57_06360 NZ_NPMC01000003.1 Protein Homology CDS 175157 175696 . - 0 ID=cds-WP_000047140.1;Parent=gene-CCO57_RS06370;Dbxref=GenBank:WP_000047140.1;Name=WP_000047140.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=CCO57_RS06370;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047140.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 175869 176081 . - . ID=gene-CCO57_RS06375;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO57_RS06375;old_locus_tag=CCO57_06365 NZ_NPMC01000003.1 Protein Homology CDS 175869 176081 . - 0 ID=cds-WP_000014594.1;Parent=gene-CCO57_RS06375;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=CCO57_RS06375;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 176369 176659 . - . ID=gene-CCO57_RS06380;Name=CCO57_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06380;old_locus_tag=CCO57_06370 NZ_NPMC01000003.1 Protein Homology CDS 176369 176659 . - 0 ID=cds-WP_000455790.1;Parent=gene-CCO57_RS06380;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=CCO57_RS06380;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 177097 177807 . + . ID=gene-CCO57_RS06385;Name=CCO57_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06385;old_locus_tag=CCO57_06375 NZ_NPMC01000003.1 Protein Homology CDS 177097 177807 . + 0 ID=cds-WP_000190524.1;Parent=gene-CCO57_RS06385;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=CCO57_RS06385;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 177857 178831 . - . ID=gene-CCO57_RS06390;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=CCO57_RS06390;old_locus_tag=CCO57_06380 NZ_NPMC01000003.1 Protein Homology CDS 177857 178831 . - 0 ID=cds-WP_000804678.1;Parent=gene-CCO57_RS06390;Dbxref=GenBank:WP_000804678.1;Name=WP_000804678.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=CCO57_RS06390;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000804678.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 179061 179723 . - . ID=gene-CCO57_RS06395;Name=CCO57_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06395;old_locus_tag=CCO57_06385 NZ_NPMC01000003.1 Protein Homology CDS 179061 179723 . - 0 ID=cds-WP_000747548.1;Parent=gene-CCO57_RS06395;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=CCO57_RS06395;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 179876 182209 . + . ID=gene-CCO57_RS06400;Name=CCO57_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06400;old_locus_tag=CCO57_06390 NZ_NPMC01000003.1 Protein Homology CDS 179876 182209 . + 0 ID=cds-WP_094914859.1;Parent=gene-CCO57_RS06400;Dbxref=GenBank:WP_094914859.1;Name=WP_094914859.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=CCO57_RS06400;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_094914859.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 182178 182618 . - . ID=gene-CCO57_RS06405;Name=CCO57_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06405;old_locus_tag=CCO57_06395 NZ_NPMC01000003.1 Protein Homology CDS 182178 182618 . - 0 ID=cds-WP_000619902.1;Parent=gene-CCO57_RS06405;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=CCO57_RS06405;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 182596 183177 . - . ID=gene-CCO57_RS06410;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=CCO57_RS06410;old_locus_tag=CCO57_06400 NZ_NPMC01000003.1 Protein Homology CDS 182596 183177 . - 0 ID=cds-WP_001188424.1;Parent=gene-CCO57_RS06410;Dbxref=GenBank:WP_001188424.1;Name=WP_001188424.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=CCO57_RS06410;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188424.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 183334 184038 . + . ID=gene-CCO57_RS06415;Name=CCO57_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06415;old_locus_tag=CCO57_06405 NZ_NPMC01000003.1 Protein Homology CDS 183334 184038 . + 0 ID=cds-WP_000637073.1;Parent=gene-CCO57_RS06415;Dbxref=GenBank:WP_000637073.1;Name=WP_000637073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=CCO57_RS06415;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637073.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 184269 185960 . + . ID=gene-CCO57_RS06420;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=CCO57_RS06420;old_locus_tag=CCO57_06410 NZ_NPMC01000003.1 Protein Homology CDS 184269 185960 . + 0 ID=cds-WP_001269258.1;Parent=gene-CCO57_RS06420;Dbxref=GenBank:WP_001269258.1;Name=WP_001269258.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=CCO57_RS06420;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269258.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 186051 186127 . + . ID=gene-CCO57_RS06425;Name=CCO57_RS06425;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS06425;old_locus_tag=CCO57_06415 NZ_NPMC01000003.1 tRNAscan-SE tRNA 186051 186127 . + . ID=rna-CCO57_RS06425;Parent=gene-CCO57_RS06425;anticodon=(pos:186085..186087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS06425;product=tRNA-Pro NZ_NPMC01000003.1 tRNAscan-SE exon 186051 186127 . + . ID=exon-CCO57_RS06425-1;Parent=rna-CCO57_RS06425;anticodon=(pos:186085..186087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS06425;product=tRNA-Pro NZ_NPMC01000003.1 RefSeq gene 186162 186295 . + . ID=gene-CCO57_RS06430;Name=CCO57_RS06430;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO57_RS06430;old_locus_tag=CCO57_06420 NZ_NPMC01000003.1 cmsearch ncRNA 186162 186295 . + . ID=rna-CCO57_RS06430;Parent=gene-CCO57_RS06430;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS06430;product=RtT sRNA NZ_NPMC01000003.1 cmsearch exon 186162 186295 . + . ID=exon-CCO57_RS06430-1;Parent=rna-CCO57_RS06430;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS06430;product=RtT sRNA NZ_NPMC01000003.1 RefSeq gene 186478 186711 . + . ID=gene-CCO57_RS06435;Name=CCO57_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06435;old_locus_tag=CCO57_06425 NZ_NPMC01000003.1 Protein Homology CDS 186478 186711 . + 0 ID=cds-WP_231125445.1;Parent=gene-CCO57_RS06435;Dbxref=GenBank:WP_231125445.1;Name=WP_231125445.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047080.2;locus_tag=CCO57_RS06435;product=phage integrase central domain-containing protein;protein_id=WP_231125445.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 187149 189116 . + . ID=gene-CCO57_RS06440;Name=CCO57_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06440;old_locus_tag=CCO57_06430 NZ_NPMC01000003.1 Protein Homology CDS 187149 189116 . + 0 ID=cds-WP_094914860.1;Parent=gene-CCO57_RS06440;Dbxref=GenBank:WP_094914860.1;Name=WP_094914860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484537.1;locus_tag=CCO57_RS06440;product=AlbA family DNA-binding domain-containing protein;protein_id=WP_094914860.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 189189 190196 . - . ID=gene-CCO57_RS06445;Name=CCO57_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06445;old_locus_tag=CCO57_06435 NZ_NPMC01000003.1 Protein Homology CDS 189189 190196 . - 0 ID=cds-WP_023210588.1;Parent=gene-CCO57_RS06445;Dbxref=GenBank:WP_023210588.1;Name=WP_023210588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=CCO57_RS06445;product=substrate-binding domain-containing protein;protein_id=WP_023210588.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 190346 191470 . + . ID=gene-CCO57_RS06450;Name=CCO57_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06450;old_locus_tag=CCO57_06440 NZ_NPMC01000003.1 Protein Homology CDS 190346 191470 . + 0 ID=cds-WP_023212599.1;Parent=gene-CCO57_RS06450;Dbxref=GenBank:WP_023212599.1;Name=WP_023212599.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=CCO57_RS06450;product=aryl-sulfate sulfotransferase;protein_id=WP_023212599.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 191528 192853 . + . ID=gene-CCO57_RS06455;Name=CCO57_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06455;old_locus_tag=CCO57_06445 NZ_NPMC01000003.1 Protein Homology CDS 191528 192853 . + 0 ID=cds-WP_094914861.1;Parent=gene-CCO57_RS06455;Dbxref=GenBank:WP_094914861.1;Name=WP_094914861.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=CCO57_RS06455;product=uracil-xanthine permease family protein;protein_id=WP_094914861.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 193409 195016 . + . ID=gene-CCO57_RS06460;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=CCO57_RS06460;old_locus_tag=CCO57_06450 NZ_NPMC01000003.1 Protein Homology CDS 193409 195016 . + 0 ID=cds-WP_000028049.1;Parent=gene-CCO57_RS06460;Dbxref=GenBank:WP_000028049.1;Name=WP_000028049.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=CCO57_RS06460;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028049.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 195173 196192 . + . ID=gene-CCO57_RS06465;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=CCO57_RS06465;old_locus_tag=CCO57_06455 NZ_NPMC01000003.1 Protein Homology CDS 195173 196192 . + 0 ID=cds-WP_000938843.1;Parent=gene-CCO57_RS06465;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=CCO57_RS06465;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 196202 197104 . + . ID=gene-CCO57_RS06470;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=CCO57_RS06470;old_locus_tag=CCO57_06460 NZ_NPMC01000003.1 Protein Homology CDS 196202 197104 . + 0 ID=cds-WP_000084690.1;Parent=gene-CCO57_RS06470;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=CCO57_RS06470;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 197115 198098 . + . ID=gene-CCO57_RS06475;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=CCO57_RS06475;old_locus_tag=CCO57_06465 NZ_NPMC01000003.1 Protein Homology CDS 197115 198098 . + 0 ID=cds-WP_001196509.1;Parent=gene-CCO57_RS06475;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=CCO57_RS06475;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 198095 199108 . + . ID=gene-CCO57_RS06480;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=CCO57_RS06480;old_locus_tag=CCO57_06470 NZ_NPMC01000003.1 Protein Homology CDS 198095 199108 . + 0 ID=cds-WP_000103563.1;Parent=gene-CCO57_RS06480;Dbxref=GenBank:WP_000103563.1;Name=WP_000103563.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=CCO57_RS06480;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000103563.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 199209 200507 . - . ID=gene-CCO57_RS06485;Name=CCO57_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06485;old_locus_tag=CCO57_06475 NZ_NPMC01000003.1 Protein Homology CDS 199209 200507 . - 0 ID=cds-WP_001150175.1;Parent=gene-CCO57_RS06485;Dbxref=GenBank:WP_001150175.1;Name=WP_001150175.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=CCO57_RS06485;product=aromatic amino acid transport family protein;protein_id=WP_001150175.1;transl_table=11 NZ_NPMC01000003.1 RefSeq pseudogene 200625 200777 . - . ID=gene-CCO57_RS06490;Name=CCO57_RS06490;end_range=200777,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS06490;old_locus_tag=CCO57_06480;partial=true;pseudo=true NZ_NPMC01000003.1 Protein Homology CDS 200625 200777 . - 0 ID=cds-CCO57_RS06490;Parent=gene-CCO57_RS06490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;end_range=200777,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=CCO57_RS06490;partial=true;product=PLP-dependent transferase;pseudo=true;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 201150 201257 . + . ID=gene-CCO57_RS06500;Name=CCO57_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06500;old_locus_tag=CCO57_06490 NZ_NPMC01000003.1 Protein Homology CDS 201150 201257 . + 0 ID=cds-WP_001537650.1;Parent=gene-CCO57_RS06500;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=CCO57_RS06500;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 201339 203018 . - . ID=gene-CCO57_RS06505;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=CCO57_RS06505;old_locus_tag=CCO57_06495 NZ_NPMC01000003.1 Protein Homology CDS 201339 203018 . - 0 ID=cds-WP_000192029.1;Parent=gene-CCO57_RS06505;Dbxref=GenBank:WP_000192029.1;Name=WP_000192029.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=CCO57_RS06505;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192029.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 203015 203206 . - . ID=gene-CCO57_RS06510;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=CCO57_RS06510;old_locus_tag=CCO57_06500 NZ_NPMC01000003.1 Protein Homology CDS 203015 203206 . - 0 ID=cds-WP_000988321.1;Parent=gene-CCO57_RS06510;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=CCO57_RS06510;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 203203 204774 . - . ID=gene-CCO57_RS06515;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=CCO57_RS06515;old_locus_tag=CCO57_06505 NZ_NPMC01000003.1 Protein Homology CDS 203203 204774 . - 0 ID=cds-WP_094914862.1;Parent=gene-CCO57_RS06515;Dbxref=GenBank:WP_094914862.1;Name=WP_094914862.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=CCO57_RS06515;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_094914862.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 205019 205222 . + . ID=gene-CCO57_RS06520;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=CCO57_RS06520;old_locus_tag=CCO57_06510 NZ_NPMC01000003.1 Protein Homology CDS 205019 205222 . + 0 ID=cds-WP_000282616.1;Parent=gene-CCO57_RS06520;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=CCO57_RS06520;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 205223 205975 . + . ID=gene-CCO57_RS06525;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=CCO57_RS06525;old_locus_tag=CCO57_06515 NZ_NPMC01000003.1 Protein Homology CDS 205223 205975 . + 0 ID=cds-WP_000996118.1;Parent=gene-CCO57_RS06525;Dbxref=GenBank:WP_000996118.1;Name=WP_000996118.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=CCO57_RS06525;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996118.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 205972 208596 . + . ID=gene-CCO57_RS06530;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=CCO57_RS06530;old_locus_tag=CCO57_06520 NZ_NPMC01000003.1 Protein Homology CDS 205972 208596 . + 0 ID=cds-WP_094914863.1;Parent=gene-CCO57_RS06530;Dbxref=GenBank:WP_094914863.1;Name=WP_094914863.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=CCO57_RS06530;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_094914863.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 208607 210907 . + . ID=gene-CCO57_RS06535;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=CCO57_RS06535;old_locus_tag=CCO57_06525 NZ_NPMC01000003.1 Protein Homology CDS 208607 210907 . + 0 ID=cds-WP_053258873.1;Parent=gene-CCO57_RS06535;Dbxref=GenBank:WP_053258873.1;Name=WP_053258873.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=CCO57_RS06535;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_053258873.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 210911 212020 . + . ID=gene-CCO57_RS06540;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=CCO57_RS06540;old_locus_tag=CCO57_06530 NZ_NPMC01000003.1 Protein Homology CDS 210911 212020 . + 0 ID=cds-WP_000988811.1;Parent=gene-CCO57_RS06540;Dbxref=GenBank:WP_000988811.1;Name=WP_000988811.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=CCO57_RS06540;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_000988811.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 212002 215544 . + . ID=gene-CCO57_RS06545;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=CCO57_RS06545;old_locus_tag=CCO57_06535 NZ_NPMC01000003.1 Protein Homology CDS 212002 215544 . + 0 ID=cds-WP_094914864.1;Parent=gene-CCO57_RS06545;Dbxref=GenBank:WP_094914864.1;Name=WP_094914864.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=CCO57_RS06545;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_094914864.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 215718 217724 . + . ID=gene-CCO57_RS06555;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=CCO57_RS06555;old_locus_tag=CCO57_06545 NZ_NPMC01000003.1 Protein Homology CDS 215718 217724 . + 0 ID=cds-WP_001266356.1;Parent=gene-CCO57_RS06555;Dbxref=GenBank:WP_001266356.1;Name=WP_001266356.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=CCO57_RS06555;product=biofilm formation regulator HmsP;protein_id=WP_001266356.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 217882 219168 . + . ID=gene-CCO57_RS06560;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=CCO57_RS06560;old_locus_tag=CCO57_06550 NZ_NPMC01000003.1 Protein Homology CDS 217882 219168 . + 0 ID=cds-WP_000858228.1;Parent=gene-CCO57_RS06560;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=CCO57_RS06560;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 219388 220875 . + . ID=gene-CCO57_RS06565;Name=CCO57_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06565;old_locus_tag=CCO57_06555 NZ_NPMC01000003.1 Protein Homology CDS 219388 220875 . + 0 ID=cds-WP_001163182.1;Parent=gene-CCO57_RS06565;Dbxref=GenBank:WP_001163182.1;Name=WP_001163182.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=CCO57_RS06565;product=M16 family metallopeptidase;protein_id=WP_001163182.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 220929 221858 . - . ID=gene-CCO57_RS06570;Name=CCO57_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06570;old_locus_tag=CCO57_06560 NZ_NPMC01000003.1 Protein Homology CDS 220929 221858 . - 0 ID=cds-WP_000037583.1;Parent=gene-CCO57_RS06570;Dbxref=GenBank:WP_000037583.1;Name=WP_000037583.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=CCO57_RS06570;product=sugar kinase;protein_id=WP_000037583.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 222087 222854 . + . ID=gene-CCO57_RS06575;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=CCO57_RS06575;old_locus_tag=CCO57_06565 NZ_NPMC01000003.1 Protein Homology CDS 222087 222854 . + 0 ID=cds-WP_000595626.1;Parent=gene-CCO57_RS06575;Dbxref=GenBank:WP_000595626.1;Name=WP_000595626.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=CCO57_RS06575;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595626.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 222964 225024 . + . ID=gene-CCO57_RS06580;Name=CCO57_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06580;old_locus_tag=CCO57_06570 NZ_NPMC01000003.1 Protein Homology CDS 222964 225024 . + 0 ID=cds-WP_000158671.1;Parent=gene-CCO57_RS06580;Dbxref=GenBank:WP_000158671.1;Name=WP_000158671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=CCO57_RS06580;product=AsmA family protein;protein_id=WP_000158671.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 225064 226386 . - . ID=gene-CCO57_RS06585;Name=CCO57_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06585;old_locus_tag=CCO57_06575 NZ_NPMC01000003.1 Protein Homology CDS 225064 226386 . - 0 ID=cds-WP_001148981.1;Parent=gene-CCO57_RS06585;Dbxref=GenBank:WP_001148981.1;Name=WP_001148981.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=CCO57_RS06585;product=MFS transporter;protein_id=WP_001148981.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 226737 227765 . - . ID=gene-CCO57_RS06590;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=CCO57_RS06590;old_locus_tag=CCO57_06580 NZ_NPMC01000003.1 Protein Homology CDS 226737 227765 . - 0 ID=cds-WP_000191230.1;Parent=gene-CCO57_RS06590;Dbxref=GenBank:WP_000191230.1;Name=WP_000191230.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=CCO57_RS06590;product=inner membrane protein YhjD;protein_id=WP_000191230.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 227838 228737 . - . ID=gene-CCO57_RS06595;Name=CCO57_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06595;old_locus_tag=CCO57_06585 NZ_NPMC01000003.1 Protein Homology CDS 227838 228737 . - 0 ID=cds-WP_023208289.1;Parent=gene-CCO57_RS06595;Dbxref=GenBank:WP_023208289.1;Name=WP_023208289.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=CCO57_RS06595;product=LysR family transcriptional regulator;protein_id=WP_023208289.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 229368 229970 . + . ID=gene-CCO57_RS06600;Name=CCO57_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06600;old_locus_tag=CCO57_06590 NZ_NPMC01000003.1 Protein Homology CDS 229368 229970 . + 0 ID=cds-WP_001196081.1;Parent=gene-CCO57_RS06600;Dbxref=GenBank:WP_001196081.1;Name=WP_001196081.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=CCO57_RS06600;product=response regulator transcription factor;protein_id=WP_001196081.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 229976 230332 . - . ID=gene-CCO57_RS06605;Name=CCO57_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06605;old_locus_tag=CCO57_06595 NZ_NPMC01000003.1 Protein Homology CDS 229976 230332 . - 0 ID=cds-WP_001120251.1;Parent=gene-CCO57_RS06605;Dbxref=GenBank:WP_001120251.1;Name=WP_001120251.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=CCO57_RS06605;product=glycoside hydrolase family protein;protein_id=WP_001120251.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 230613 232202 . + . ID=gene-CCO57_RS06610;Name=CCO57_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06610;old_locus_tag=CCO57_06600 NZ_NPMC01000003.1 Protein Homology CDS 230613 232202 . + 0 ID=cds-WP_000185015.1;Parent=gene-CCO57_RS06610;Dbxref=GenBank:WP_000185015.1;Name=WP_000185015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=CCO57_RS06610;product=STY4199 family HEPN domain-containing protein;protein_id=WP_000185015.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 232215 233864 . - . ID=gene-CCO57_RS06615;Name=CCO57_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06615;old_locus_tag=CCO57_06605 NZ_NPMC01000003.1 Protein Homology CDS 232215 233864 . - 0 ID=cds-WP_000934254.1;Parent=gene-CCO57_RS06615;Dbxref=GenBank:WP_000934254.1;Name=WP_000934254.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=CCO57_RS06615;product=alpha%2Calpha-trehalase;protein_id=WP_000934254.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 234190 234909 . + . ID=gene-CCO57_RS06620;Name=CCO57_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06620;old_locus_tag=CCO57_06610 NZ_NPMC01000003.1 Protein Homology CDS 234190 234909 . + 0 ID=cds-WP_000572566.1;Parent=gene-CCO57_RS06620;Dbxref=GenBank:WP_000572566.1;Name=WP_000572566.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=CCO57_RS06620;product=GntR family transcriptional regulator;protein_id=WP_000572566.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 235085 236062 . + . ID=gene-CCO57_RS06625;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=CCO57_RS06625;old_locus_tag=CCO57_06615 NZ_NPMC01000003.1 Protein Homology CDS 235085 236062 . + 0 ID=cds-WP_094914865.1;Parent=gene-CCO57_RS06625;Dbxref=GenBank:WP_094914865.1;Name=WP_094914865.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=CCO57_RS06625;product=6-phosphofructose-aspartate deglycase;protein_id=WP_094914865.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 236126 236971 . + . ID=gene-CCO57_RS06630;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=CCO57_RS06630;old_locus_tag=CCO57_06620 NZ_NPMC01000003.1 Protein Homology CDS 236126 236971 . + 0 ID=cds-WP_000028427.1;Parent=gene-CCO57_RS06630;Dbxref=GenBank:WP_000028427.1;Name=WP_000028427.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=CCO57_RS06630;product=fructose-aspartate kinase;protein_id=WP_000028427.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 237025 238344 . + . ID=gene-CCO57_RS06635;Name=CCO57_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06635;old_locus_tag=CCO57_06625 NZ_NPMC01000003.1 Protein Homology CDS 237025 238344 . + 0 ID=cds-WP_094914866.1;Parent=gene-CCO57_RS06635;Dbxref=GenBank:WP_094914866.1;Name=WP_094914866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=CCO57_RS06635;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_094914866.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 238403 239446 . + . ID=gene-CCO57_RS06640;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=CCO57_RS06640;old_locus_tag=CCO57_06630 NZ_NPMC01000003.1 Protein Homology CDS 238403 239446 . + 0 ID=cds-WP_023208292.1;Parent=gene-CCO57_RS06640;Dbxref=GenBank:WP_023208292.1;Name=WP_023208292.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=CCO57_RS06640;product=fructose-asparagine asparaginase;protein_id=WP_023208292.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 239493 240845 . - . ID=gene-CCO57_RS06645;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=CCO57_RS06645;old_locus_tag=CCO57_06635 NZ_NPMC01000003.1 Protein Homology CDS 239493 240845 . - 0 ID=cds-WP_000160772.1;Parent=gene-CCO57_RS06645;Dbxref=GenBank:WP_000160772.1;Name=WP_000160772.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=CCO57_RS06645;product=glutathione-disulfide reductase;protein_id=WP_000160772.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 240950 241792 . - . ID=gene-CCO57_RS06650;Name=CCO57_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06650;old_locus_tag=CCO57_06640 NZ_NPMC01000003.1 Protein Homology CDS 240950 241792 . - 0 ID=cds-WP_094914867.1;Parent=gene-CCO57_RS06650;Dbxref=GenBank:WP_094914867.1;Name=WP_094914867.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=CCO57_RS06650;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_094914867.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 242003 243274 . + . ID=gene-CCO57_RS06655;Name=CCO57_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06655;old_locus_tag=CCO57_06645 NZ_NPMC01000003.1 Protein Homology CDS 242003 243274 . + 0 ID=cds-WP_000766150.1;Parent=gene-CCO57_RS06655;Dbxref=GenBank:WP_000766150.1;Name=WP_000766150.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=CCO57_RS06655;product=acid phosphatase;protein_id=WP_000766150.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 243456 245498 . + . ID=gene-CCO57_RS06660;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=CCO57_RS06660;old_locus_tag=CCO57_06650 NZ_NPMC01000003.1 Protein Homology CDS 243456 245498 . + 0 ID=cds-WP_000184178.1;Parent=gene-CCO57_RS06660;Dbxref=GenBank:WP_000184178.1;Name=WP_000184178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=CCO57_RS06660;product=oligopeptidase A;protein_id=WP_000184178.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 245505 246263 . + . ID=gene-CCO57_RS06665;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=CCO57_RS06665;old_locus_tag=CCO57_06655 NZ_NPMC01000003.1 Protein Homology CDS 245505 246263 . + 0 ID=cds-WP_001165130.1;Parent=gene-CCO57_RS06665;Dbxref=GenBank:WP_001165130.1;Name=WP_001165130.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=CCO57_RS06665;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001165130.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 246355 247827 . - . ID=gene-CCO57_RS06670;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=CCO57_RS06670;old_locus_tag=CCO57_06660 NZ_NPMC01000003.1 Protein Homology CDS 246355 247827 . - 0 ID=cds-WP_001098274.1;Parent=gene-CCO57_RS06670;Dbxref=GenBank:WP_001098274.1;Name=WP_001098274.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=CCO57_RS06670;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098274.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 248152 248586 . - . ID=gene-CCO57_RS06675;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=CCO57_RS06675;old_locus_tag=CCO57_06665 NZ_NPMC01000003.1 Protein Homology CDS 248152 248586 . - 0 ID=cds-WP_000323565.1;Parent=gene-CCO57_RS06675;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=CCO57_RS06675;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 248974 249309 . + . ID=gene-CCO57_RS06680;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=CCO57_RS06680;old_locus_tag=CCO57_06670 NZ_NPMC01000003.1 Protein Homology CDS 248974 249309 . + 0 ID=cds-WP_000626193.1;Parent=gene-CCO57_RS06680;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=CCO57_RS06680;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 249450 250946 . - . ID=gene-CCO57_RS06685;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=CCO57_RS06685;old_locus_tag=CCO57_06675 NZ_NPMC01000003.1 Protein Homology CDS 249450 250946 . - 0 ID=cds-WP_000902764.1;Parent=gene-CCO57_RS06685;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=CCO57_RS06685;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 251177 252373 . + . ID=gene-CCO57_RS06690;Name=CCO57_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06690;old_locus_tag=CCO57_06680 NZ_NPMC01000003.1 Protein Homology CDS 251177 252373 . + 0 ID=cds-WP_000439244.1;Parent=gene-CCO57_RS06690;Dbxref=GenBank:WP_000439244.1;Name=WP_000439244.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=CCO57_RS06690;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439244.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 252679 253746 . + . ID=gene-CCO57_RS06695;Name=CCO57_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06695;old_locus_tag=CCO57_06685 NZ_NPMC01000003.1 Protein Homology CDS 252679 253746 . + 0 ID=cds-WP_094914868.1;Parent=gene-CCO57_RS06695;Dbxref=GenBank:WP_094914868.1;Name=WP_094914868.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=CCO57_RS06695;product=HlyD family secretion protein;protein_id=WP_094914868.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 253743 256484 . + . ID=gene-CCO57_RS06700;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=CCO57_RS06700;old_locus_tag=CCO57_06690 NZ_NPMC01000003.1 Protein Homology CDS 253743 256484 . + 0 ID=cds-WP_094914869.1;Parent=gene-CCO57_RS06700;Dbxref=GenBank:WP_094914869.1;Name=WP_094914869.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=CCO57_RS06700;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_094914869.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 256484 257608 . + . ID=gene-CCO57_RS06705;Name=CCO57_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06705;old_locus_tag=CCO57_06695 NZ_NPMC01000003.1 Protein Homology CDS 256484 257608 . + 0 ID=cds-WP_094914870.1;Parent=gene-CCO57_RS06705;Dbxref=GenBank:WP_094914870.1;Name=WP_094914870.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=CCO57_RS06705;product=ABC transporter permease;protein_id=WP_094914870.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 257711 258112 . - . ID=gene-CCO57_RS06710;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=CCO57_RS06710;old_locus_tag=CCO57_06700 NZ_NPMC01000003.1 Protein Homology CDS 257711 258112 . - 0 ID=cds-WP_001190057.1;Parent=gene-CCO57_RS06710;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=CCO57_RS06710;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 258204 258782 . - . ID=gene-CCO57_RS06715;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=CCO57_RS06715;old_locus_tag=CCO57_06705 NZ_NPMC01000003.1 Protein Homology CDS 258204 258782 . - 0 ID=cds-WP_000284366.1;Parent=gene-CCO57_RS06715;Dbxref=GenBank:WP_000284366.1;Name=WP_000284366.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=CCO57_RS06715;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000284366.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 258834 259883 . - . ID=gene-CCO57_RS06720;Name=CCO57_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06720;old_locus_tag=CCO57_06710 NZ_NPMC01000003.1 Protein Homology CDS 258834 259883 . - 0 ID=cds-WP_000179588.1;Parent=gene-CCO57_RS06720;Dbxref=GenBank:WP_000179588.1;Name=WP_000179588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=CCO57_RS06720;product=AI-2E family transporter;protein_id=WP_000179588.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 259973 261232 . + . ID=gene-CCO57_RS06725;Name=CCO57_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06725;old_locus_tag=CCO57_06715 NZ_NPMC01000003.1 Protein Homology CDS 259973 261232 . + 0 ID=cds-WP_094914871.1;Parent=gene-CCO57_RS06725;Dbxref=GenBank:WP_094914871.1;Name=WP_094914871.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=CCO57_RS06725;product=MFS transporter;protein_id=WP_094914871.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 261236 261793 . - . ID=gene-CCO57_RS06730;Name=CCO57_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06730;old_locus_tag=CCO57_06720 NZ_NPMC01000003.1 Protein Homology CDS 261236 261793 . - 0 ID=cds-WP_001245277.1;Parent=gene-CCO57_RS06730;Dbxref=GenBank:WP_001245277.1;Name=WP_001245277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=CCO57_RS06730;product=DcrB family lipoprotein;protein_id=WP_001245277.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 261866 262531 . - . ID=gene-CCO57_RS06735;Name=CCO57_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06735;old_locus_tag=CCO57_06725 NZ_NPMC01000003.1 Protein Homology CDS 261866 262531 . - 0 ID=cds-WP_001531644.1;Parent=gene-CCO57_RS06735;Dbxref=GenBank:WP_001531644.1;Name=WP_001531644.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=CCO57_RS06735;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001531644.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 262701 262946 . + . ID=gene-CCO57_RS06740;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=CCO57_RS06740;old_locus_tag=CCO57_06730 NZ_NPMC01000003.1 Protein Homology CDS 262701 262946 . + 0 ID=cds-WP_001541054.1;Parent=gene-CCO57_RS06740;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=CCO57_RS06740;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 262970 264613 . - . ID=gene-CCO57_RS06745;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=CCO57_RS06745;old_locus_tag=CCO57_06735 NZ_NPMC01000003.1 Protein Homology CDS 262970 264613 . - 0 ID=cds-WP_023215176.1;Parent=gene-CCO57_RS06745;Dbxref=GenBank:WP_023215176.1;Name=WP_023215176.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=CCO57_RS06745;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_023215176.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 264813 267011 . - . ID=gene-CCO57_RS06750;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=CCO57_RS06750;old_locus_tag=CCO57_06740 NZ_NPMC01000003.1 Protein Homology CDS 264813 267011 . - 0 ID=cds-WP_024156890.1;Parent=gene-CCO57_RS06750;Dbxref=GenBank:WP_024156890.1;Name=WP_024156890.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=CCO57_RS06750;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_024156890.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 267092 267718 . - . ID=gene-CCO57_RS06755;Name=CCO57_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06755;old_locus_tag=CCO57_06745 NZ_NPMC01000003.1 Protein Homology CDS 267092 267718 . - 0 ID=cds-WP_000964735.1;Parent=gene-CCO57_RS06755;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=CCO57_RS06755;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 267860 268231 . + . ID=gene-CCO57_RS06760;Name=CCO57_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06760;old_locus_tag=CCO57_06750 NZ_NPMC01000003.1 Protein Homology CDS 267860 268231 . + 0 ID=cds-WP_000042850.1;Parent=gene-CCO57_RS06760;Dbxref=GenBank:WP_000042850.1;Name=WP_000042850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=CCO57_RS06760;product=DUF2500 domain-containing protein;protein_id=WP_000042850.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 268253 268522 . - . ID=gene-CCO57_RS06765;Name=CCO57_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06765;old_locus_tag=CCO57_06755 NZ_NPMC01000003.1 Protein Homology CDS 268253 268522 . - 0 ID=cds-WP_000906762.1;Parent=gene-CCO57_RS06765;Dbxref=GenBank:WP_000906762.1;Name=WP_000906762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=CCO57_RS06765;product=DUF1145 family protein;protein_id=WP_000906762.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 268512 269108 . - . ID=gene-CCO57_RS06770;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CCO57_RS06770;old_locus_tag=CCO57_06760 NZ_NPMC01000003.1 Protein Homology CDS 268512 269108 . - 0 ID=cds-WP_094914872.1;Parent=gene-CCO57_RS06770;Dbxref=GenBank:WP_094914872.1;Name=WP_094914872.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=CCO57_RS06770;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_094914872.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 269234 270694 . + . ID=gene-CCO57_RS06775;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CCO57_RS06775;old_locus_tag=CCO57_06765 NZ_NPMC01000003.1 Protein Homology CDS 269234 270694 . + 0 ID=cds-WP_094914873.1;Parent=gene-CCO57_RS06775;Dbxref=GenBank:WP_094914873.1;Name=WP_094914873.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=CCO57_RS06775;product=signal recognition particle-docking protein FtsY;protein_id=WP_094914873.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 270697 271365 . + . ID=gene-CCO57_RS06780;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=CCO57_RS06780;old_locus_tag=CCO57_06770 NZ_NPMC01000003.1 Protein Homology CDS 270697 271365 . + 0 ID=cds-WP_000617729.1;Parent=gene-CCO57_RS06780;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=CCO57_RS06780;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 271358 272413 . + . ID=gene-CCO57_RS06785;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=CCO57_RS06785;old_locus_tag=CCO57_06775 NZ_NPMC01000003.1 Protein Homology CDS 271358 272413 . + 0 ID=cds-WP_001081707.1;Parent=gene-CCO57_RS06785;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=CCO57_RS06785;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 272659 273513 . + . ID=gene-CCO57_RS06790;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=CCO57_RS06790;old_locus_tag=CCO57_06780 NZ_NPMC01000003.1 Protein Homology CDS 272659 273513 . + 0 ID=cds-WP_000159621.1;Parent=gene-CCO57_RS06790;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=CCO57_RS06790;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 273835 274938 . + . ID=gene-CCO57_RS06795;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=CCO57_RS06795;old_locus_tag=CCO57_06785 NZ_NPMC01000003.1 Protein Homology CDS 273835 274938 . + 0 ID=cds-WP_001747710.1;Parent=gene-CCO57_RS06795;Dbxref=GenBank:WP_001747710.1;Name=WP_001747710.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=CCO57_RS06795;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001747710.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 275022 275156 . - . ID=gene-CCO57_RS06800;Name=CCO57_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06800;old_locus_tag=CCO57_06790 NZ_NPMC01000003.1 Protein Homology CDS 275022 275156 . - 0 ID=cds-WP_001517957.1;Parent=gene-CCO57_RS06800;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=CCO57_RS06800;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 275134 275517 . - . ID=gene-CCO57_RS06805;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=CCO57_RS06805;old_locus_tag=CCO57_06795 NZ_NPMC01000003.1 Protein Homology CDS 275134 275517 . - 0 ID=cds-WP_000778873.1;Parent=gene-CCO57_RS06805;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=CCO57_RS06805;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 275939 277048 . + . ID=gene-CCO57_RS06810;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=CCO57_RS06810;old_locus_tag=CCO57_06800 NZ_NPMC01000003.1 Protein Homology CDS 275939 277048 . + 0 ID=cds-WP_000822976.1;Parent=gene-CCO57_RS06810;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=CCO57_RS06810;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 277108 278034 . + . ID=gene-CCO57_RS06815;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=CCO57_RS06815;old_locus_tag=CCO57_06805 NZ_NPMC01000003.1 Protein Homology CDS 277108 278034 . + 0 ID=cds-WP_000003007.1;Parent=gene-CCO57_RS06815;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=CCO57_RS06815;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 278031 279308 . + . ID=gene-CCO57_RS06820;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=CCO57_RS06820;old_locus_tag=CCO57_06810 NZ_NPMC01000003.1 Protein Homology CDS 278031 279308 . + 0 ID=cds-WP_000803764.1;Parent=gene-CCO57_RS06820;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=CCO57_RS06820;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 279305 280072 . + . ID=gene-CCO57_RS06825;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=CCO57_RS06825;old_locus_tag=CCO57_06815 NZ_NPMC01000003.1 Protein Homology CDS 279305 280072 . + 0 ID=cds-WP_000082080.1;Parent=gene-CCO57_RS06825;Dbxref=GenBank:WP_000082080.1;Name=WP_000082080.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=CCO57_RS06825;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082080.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 280074 280787 . + . ID=gene-CCO57_RS06830;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=CCO57_RS06830;old_locus_tag=CCO57_06820 NZ_NPMC01000003.1 Protein Homology CDS 280074 280787 . + 0 ID=cds-WP_000416114.1;Parent=gene-CCO57_RS06830;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=CCO57_RS06830;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 280951 281229 . + . ID=gene-CCO57_RS06835;Name=CCO57_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06835;old_locus_tag=CCO57_06825 NZ_NPMC01000003.1 Protein Homology CDS 280951 281229 . + 0 ID=cds-WP_000621258.1;Parent=gene-CCO57_RS06835;Dbxref=GenBank:WP_000621258.1;Name=WP_000621258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621258.1;locus_tag=CCO57_RS06835;product=hypothetical protein;protein_id=WP_000621258.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 281462 282778 . + . ID=gene-CCO57_RS06840;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=CCO57_RS06840;old_locus_tag=CCO57_06830 NZ_NPMC01000003.1 Protein Homology CDS 281462 282778 . + 0 ID=cds-WP_000624747.1;Parent=gene-CCO57_RS06840;Dbxref=GenBank:WP_000624747.1;Name=WP_000624747.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=CCO57_RS06840;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624747.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 282883 283770 . + . ID=gene-CCO57_RS06845;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=CCO57_RS06845;old_locus_tag=CCO57_06835 NZ_NPMC01000003.1 Protein Homology CDS 282883 283770 . + 0 ID=cds-WP_000099303.1;Parent=gene-CCO57_RS06845;Dbxref=GenBank:WP_000099303.1;Name=WP_000099303.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=CCO57_RS06845;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099303.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 283767 284612 . + . ID=gene-CCO57_RS06850;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=CCO57_RS06850;old_locus_tag=CCO57_06840 NZ_NPMC01000003.1 Protein Homology CDS 283767 284612 . + 0 ID=cds-WP_094914874.1;Parent=gene-CCO57_RS06850;Dbxref=GenBank:WP_094914874.1;Name=WP_094914874.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=CCO57_RS06850;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_094914874.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 284615 285685 . + . ID=gene-CCO57_RS06855;Name=CCO57_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06855;old_locus_tag=CCO57_06845 NZ_NPMC01000003.1 Protein Homology CDS 284615 285685 . + 0 ID=cds-WP_000907842.1;Parent=gene-CCO57_RS06855;Dbxref=GenBank:WP_000907842.1;Name=WP_000907842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=CCO57_RS06855;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907842.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 285682 286422 . + . ID=gene-CCO57_RS06860;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=CCO57_RS06860;old_locus_tag=CCO57_06850 NZ_NPMC01000003.1 Protein Homology CDS 285682 286422 . + 0 ID=cds-WP_000073548.1;Parent=gene-CCO57_RS06860;Dbxref=GenBank:WP_000073548.1;Name=WP_000073548.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=CCO57_RS06860;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073548.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 286435 286851 . - . ID=gene-CCO57_RS06865;Name=CCO57_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06865;old_locus_tag=CCO57_06855 NZ_NPMC01000003.1 Protein Homology CDS 286435 286851 . - 0 ID=cds-WP_000826034.1;Parent=gene-CCO57_RS06865;Dbxref=GenBank:WP_000826034.1;Name=WP_000826034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=CCO57_RS06865;product=DUF2756 family protein;protein_id=WP_000826034.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 286977 288719 . + . ID=gene-CCO57_RS06870;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=CCO57_RS06870;old_locus_tag=CCO57_06860 NZ_NPMC01000003.1 Protein Homology CDS 286977 288719 . + 0 ID=cds-WP_023136532.1;Parent=gene-CCO57_RS06870;Dbxref=GenBank:WP_023136532.1;Name=WP_023136532.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=CCO57_RS06870;product=gamma-glutamyltransferase;protein_id=WP_023136532.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 288764 289798 . - . ID=gene-CCO57_RS06875;Name=CCO57_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06875;old_locus_tag=CCO57_06865 NZ_NPMC01000003.1 Protein Homology CDS 288764 289798 . - 0 ID=cds-WP_000675710.1;Parent=gene-CCO57_RS06875;Dbxref=GenBank:WP_000675710.1;Name=WP_000675710.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=CCO57_RS06875;product=phosphotriesterase family protein;protein_id=WP_000675710.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 289795 290766 . - . ID=gene-CCO57_RS06880;Name=CCO57_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06880;old_locus_tag=CCO57_06870 NZ_NPMC01000003.1 Protein Homology CDS 289795 290766 . - 0 ID=cds-WP_001038949.1;Parent=gene-CCO57_RS06880;Dbxref=GenBank:WP_001038949.1;Name=WP_001038949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=CCO57_RS06880;product=DMT family transporter;protein_id=WP_001038949.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 290820 291581 . - . ID=gene-CCO57_RS06885;Name=CCO57_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06885;old_locus_tag=CCO57_06875 NZ_NPMC01000003.1 Protein Homology CDS 290820 291581 . - 0 ID=cds-WP_001066515.1;Parent=gene-CCO57_RS06885;Dbxref=GenBank:WP_001066515.1;Name=WP_001066515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=CCO57_RS06885;product=glutamine amidotransferase;protein_id=WP_001066515.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 291597 292811 . - . ID=gene-CCO57_RS06890;Name=CCO57_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06890;old_locus_tag=CCO57_06880 NZ_NPMC01000003.1 Protein Homology CDS 291597 292811 . - 0 ID=cds-WP_000667447.1;Parent=gene-CCO57_RS06890;Dbxref=GenBank:WP_000667447.1;Name=WP_000667447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=CCO57_RS06890;product=PfkB family carbohydrate kinase;protein_id=WP_000667447.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 293076 293564 . - . ID=gene-CCO57_RS06895;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=CCO57_RS06895;old_locus_tag=CCO57_06885 NZ_NPMC01000003.1 Protein Homology CDS 293076 293564 . - 0 ID=cds-WP_094914875.1;Parent=gene-CCO57_RS06895;Dbxref=GenBank:WP_094914875.1;Name=WP_094914875.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=CCO57_RS06895;product=N-acetyltransferase;protein_id=WP_094914875.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 294031 295068 . + . ID=gene-CCO57_RS06905;Name=CCO57_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06905;old_locus_tag=CCO57_06895 NZ_NPMC01000003.1 Protein Homology CDS 294031 295068 . + 0 ID=cds-WP_000172401.1;Parent=gene-CCO57_RS06905;Dbxref=GenBank:WP_000172401.1;Name=WP_000172401.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=CCO57_RS06905;product=oxidoreductase;protein_id=WP_000172401.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 295192 295887 . + . ID=gene-CCO57_RS06910;Name=CCO57_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06910;old_locus_tag=CCO57_06900 NZ_NPMC01000003.1 Protein Homology CDS 295192 295887 . + 0 ID=cds-WP_000639789.1;Parent=gene-CCO57_RS06910;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=CCO57_RS06910;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 296017 297012 . + . ID=gene-CCO57_RS06915;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=CCO57_RS06915;old_locus_tag=CCO57_06905 NZ_NPMC01000003.1 Protein Homology CDS 296017 297012 . + 0 ID=cds-WP_023136530.1;Parent=gene-CCO57_RS06915;Dbxref=GenBank:WP_023136530.1;Name=WP_023136530.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=CCO57_RS06915;product=gluconate operon transcriptional repressor GntR;protein_id=WP_023136530.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 297151 297684 . + . ID=gene-CCO57_RS06920;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CCO57_RS06920;old_locus_tag=CCO57_06910 NZ_NPMC01000003.1 Protein Homology CDS 297151 297684 . + 0 ID=cds-WP_000108340.1;Parent=gene-CCO57_RS06920;Dbxref=GenBank:WP_000108340.1;Name=WP_000108340.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=CCO57_RS06920;product=gluconokinase;protein_id=WP_000108340.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 297681 299021 . + . ID=gene-CCO57_RS06925;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=CCO57_RS06925;old_locus_tag=CCO57_06915 NZ_NPMC01000003.1 Protein Homology CDS 297681 299021 . + 0 ID=cds-WP_000105950.1;Parent=gene-CCO57_RS06925;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=CCO57_RS06925;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11 NZ_NPMC01000003.1 RefSeq pseudogene 298944 299318 . - . ID=gene-CCO57_RS06930;Name=CCO57_RS06930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS06930;old_locus_tag=CCO57_06920;partial=true;pseudo=true;start_range=.,298944 NZ_NPMC01000003.1 Protein Homology CDS 298944 299318 . - 0 ID=cds-CCO57_RS06930;Parent=gene-CCO57_RS06930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=CCO57_RS06930;partial=true;product=MarC family protein;pseudo=true;start_range=.,298944;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 299445 300551 . + . ID=gene-CCO57_RS06935;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO57_RS06935;old_locus_tag=CCO57_06925 NZ_NPMC01000003.1 Protein Homology CDS 299445 300551 . + 0 ID=cds-WP_000799940.1;Parent=gene-CCO57_RS06935;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=CCO57_RS06935;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 300929 303115 . + . ID=gene-CCO57_RS06940;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=CCO57_RS06940;old_locus_tag=CCO57_06930 NZ_NPMC01000003.1 Protein Homology CDS 300929 303115 . + 0 ID=cds-WP_000098558.1;Parent=gene-CCO57_RS06940;Dbxref=GenBank:WP_000098558.1;Name=WP_000098558.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=CCO57_RS06940;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098558.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 303112 305088 . + . ID=gene-CCO57_RS06945;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO57_RS06945;old_locus_tag=CCO57_06935 NZ_NPMC01000003.1 Protein Homology CDS 303112 305088 . + 0 ID=cds-WP_017441607.1;Parent=gene-CCO57_RS06945;Dbxref=GenBank:WP_017441607.1;Name=WP_017441607.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=CCO57_RS06945;product=glycogen debranching protein GlgX;protein_id=WP_017441607.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 305103 306398 . + . ID=gene-CCO57_RS06950;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=CCO57_RS06950;old_locus_tag=CCO57_06940 NZ_NPMC01000003.1 Protein Homology CDS 305103 306398 . + 0 ID=cds-WP_000253995.1;Parent=gene-CCO57_RS06950;Dbxref=GenBank:WP_000253995.1;Name=WP_000253995.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=CCO57_RS06950;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253995.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 306398 307831 . + . ID=gene-CCO57_RS06955;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=CCO57_RS06955;old_locus_tag=CCO57_06945 NZ_NPMC01000003.1 Protein Homology CDS 306398 307831 . + 0 ID=cds-WP_001197669.1;Parent=gene-CCO57_RS06955;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=CCO57_RS06955;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 307851 310298 . + . ID=gene-CCO57_RS06960;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=CCO57_RS06960;old_locus_tag=CCO57_06950 NZ_NPMC01000003.1 Protein Homology CDS 307851 310298 . + 0 ID=cds-WP_000993424.1;Parent=gene-CCO57_RS06960;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=CCO57_RS06960;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 310390 311898 . - . ID=gene-CCO57_RS06965;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=CCO57_RS06965;old_locus_tag=CCO57_06955 NZ_NPMC01000003.1 Protein Homology CDS 310390 311898 . - 0 ID=cds-WP_000448180.1;Parent=gene-CCO57_RS06965;Dbxref=GenBank:WP_000448180.1;Name=WP_000448180.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=CCO57_RS06965;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448180.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 312097 312423 . + . ID=gene-CCO57_RS06970;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=CCO57_RS06970;old_locus_tag=CCO57_06960 NZ_NPMC01000003.1 Protein Homology CDS 312097 312423 . + 0 ID=cds-WP_000434523.1;Parent=gene-CCO57_RS06970;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=CCO57_RS06970;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 312499 313329 . + . ID=gene-CCO57_RS06975;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=CCO57_RS06975;old_locus_tag=CCO57_06965 NZ_NPMC01000003.1 Protein Homology CDS 312499 313329 . + 0 ID=cds-WP_000928701.1;Parent=gene-CCO57_RS06975;Dbxref=GenBank:WP_000928701.1;Name=WP_000928701.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=CCO57_RS06975;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928701.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 313423 314181 . + . ID=gene-CCO57_RS06980;Name=CCO57_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS06980;old_locus_tag=CCO57_06970 NZ_NPMC01000003.1 Protein Homology CDS 313423 314181 . + 0 ID=cds-WP_000815084.1;Parent=gene-CCO57_RS06980;Dbxref=GenBank:WP_000815084.1;Name=WP_000815084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=CCO57_RS06980;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815084.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 314249 316954 . - . ID=gene-CCO57_RS06985;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=CCO57_RS06985;old_locus_tag=CCO57_06975 NZ_NPMC01000003.1 Protein Homology CDS 314249 316954 . - 0 ID=cds-WP_000907030.1;Parent=gene-CCO57_RS06985;Dbxref=GenBank:WP_000907030.1;Name=WP_000907030.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=CCO57_RS06985;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907030.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 317548 319941 . + . ID=gene-CCO57_RS06990;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=CCO57_RS06990;old_locus_tag=CCO57_06980 NZ_NPMC01000003.1 Protein Homology CDS 317548 319941 . + 0 ID=cds-WP_076166711.1;Parent=gene-CCO57_RS06990;Dbxref=GenBank:WP_076166711.1;Name=WP_076166711.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=CCO57_RS06990;product=maltodextrin phosphorylase;protein_id=WP_076166711.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 319951 322029 . + . ID=gene-CCO57_RS06995;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=CCO57_RS06995;old_locus_tag=CCO57_06985 NZ_NPMC01000003.1 Protein Homology CDS 319951 322029 . + 0 ID=cds-WP_076166709.1;Parent=gene-CCO57_RS06995;Dbxref=GenBank:WP_076166709.1;Name=WP_076166709.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=CCO57_RS06995;product=4-alpha-glucanotransferase;protein_id=WP_076166709.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 322148 323464 . - . ID=gene-CCO57_RS07000;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=CCO57_RS07000;old_locus_tag=CCO57_06990 NZ_NPMC01000003.1 Protein Homology CDS 322148 323464 . - 0 ID=cds-WP_001131741.1;Parent=gene-CCO57_RS07000;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=CCO57_RS07000;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 323841 324416 . - . ID=gene-CCO57_RS07005;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=CCO57_RS07005;old_locus_tag=CCO57_06995 NZ_NPMC01000003.1 Protein Homology CDS 323841 324416 . - 0 ID=cds-WP_000619387.1;Parent=gene-CCO57_RS07005;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=CCO57_RS07005;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 324475 325158 . - . ID=gene-CCO57_RS07010;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=CCO57_RS07010;old_locus_tag=CCO57_07000 NZ_NPMC01000003.1 Protein Homology CDS 324475 325158 . - 0 ID=cds-WP_000958733.1;Parent=gene-CCO57_RS07010;Dbxref=GenBank:WP_000958733.1;Name=WP_000958733.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=CCO57_RS07010;product=DNA utilization protein GntX;protein_id=WP_000958733.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 325196 325966 . + . ID=gene-CCO57_RS07015;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=CCO57_RS07015;old_locus_tag=CCO57_07005 NZ_NPMC01000003.1 Protein Homology CDS 325196 325966 . + 0 ID=cds-WP_000998138.1;Parent=gene-CCO57_RS07015;Dbxref=GenBank:WP_000998138.1;Name=WP_000998138.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=CCO57_RS07015;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998138.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 326002 326916 . - . ID=gene-CCO57_RS07020;Name=CCO57_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07020;old_locus_tag=CCO57_07010 NZ_NPMC01000003.1 Protein Homology CDS 326002 326916 . - 0 ID=cds-WP_001608492.1;Parent=gene-CCO57_RS07020;Dbxref=GenBank:WP_001608492.1;Name=WP_001608492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=CCO57_RS07020;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_001608492.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 327151 327387 . - . ID=gene-CCO57_RS07025;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=CCO57_RS07025;old_locus_tag=CCO57_07015 NZ_NPMC01000003.1 Protein Homology CDS 327151 327387 . - 0 ID=cds-WP_000157589.1;Parent=gene-CCO57_RS07025;Dbxref=GenBank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=CCO57_RS07025;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 327400 329718 . - . ID=gene-CCO57_RS07030;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CCO57_RS07030;old_locus_tag=CCO57_07020 NZ_NPMC01000003.1 Protein Homology CDS 327400 329718 . - 0 ID=cds-WP_000736970.1;Parent=gene-CCO57_RS07030;Dbxref=GenBank:WP_000736970.1;Name=WP_000736970.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=CCO57_RS07030;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736970.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 329737 329964 . - . ID=gene-CCO57_RS07035;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=CCO57_RS07035;old_locus_tag=CCO57_07025 NZ_NPMC01000003.1 Protein Homology CDS 329737 329964 . - 0 ID=cds-WP_001160955.1;Parent=gene-CCO57_RS07035;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=CCO57_RS07035;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 330401 332731 . - . ID=gene-CCO57_RS07045;Name=CCO57_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07045;old_locus_tag=CCO57_07035 NZ_NPMC01000003.1 Protein Homology CDS 330401 332731 . - 0 ID=cds-WP_000980661.1;Parent=gene-CCO57_RS07045;Dbxref=GenBank:WP_000980661.1;Name=WP_000980661.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=CCO57_RS07045;product=Tex family protein;protein_id=WP_000980661.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 332830 333303 . - . ID=gene-CCO57_RS07050;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=CCO57_RS07050;old_locus_tag=CCO57_07040 NZ_NPMC01000003.1 Protein Homology CDS 332830 333303 . - 0 ID=cds-WP_000856695.1;Parent=gene-CCO57_RS07050;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=CCO57_RS07050;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 333529 334248 . + . ID=gene-CCO57_RS07055;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=CCO57_RS07055;old_locus_tag=CCO57_07045 NZ_NPMC01000003.1 Protein Homology CDS 333529 334248 . + 0 ID=cds-WP_001157751.1;Parent=gene-CCO57_RS07055;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=CCO57_RS07055;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 334245 335597 . + . ID=gene-CCO57_RS07060;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=CCO57_RS07060;old_locus_tag=CCO57_07050 NZ_NPMC01000003.1 Protein Homology CDS 334245 335597 . + 0 ID=cds-WP_001253818.1;Parent=gene-CCO57_RS07060;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=CCO57_RS07060;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 335672 337291 . - . ID=gene-CCO57_RS07065;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CCO57_RS07065;old_locus_tag=CCO57_07055 NZ_NPMC01000003.1 Protein Homology CDS 335672 337291 . - 0 ID=cds-WP_094914876.1;Parent=gene-CCO57_RS07065;Dbxref=GenBank:WP_094914876.1;Name=WP_094914876.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=CCO57_RS07065;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_094914876.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 337671 339380 . + . ID=gene-CCO57_RS07070;Name=CCO57_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07070;old_locus_tag=CCO57_07060 NZ_NPMC01000003.1 Protein Homology CDS 337671 339380 . + 0 ID=cds-WP_094914877.1;Parent=gene-CCO57_RS07070;Dbxref=GenBank:WP_094914877.1;Name=WP_094914877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=CCO57_RS07070;product=DUF4153 domain-containing protein;protein_id=WP_094914877.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 339489 340367 . - . ID=gene-CCO57_RS07075;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CCO57_RS07075;old_locus_tag=CCO57_07065 NZ_NPMC01000003.1 Protein Homology CDS 339489 340367 . - 0 ID=cds-WP_001135571.1;Parent=gene-CCO57_RS07075;Dbxref=GenBank:WP_001135571.1;Name=WP_001135571.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=CCO57_RS07075;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135571.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 340392 340793 . - . ID=gene-CCO57_RS07080;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=CCO57_RS07080;old_locus_tag=CCO57_07070 NZ_NPMC01000003.1 Protein Homology CDS 340392 340793 . - 0 ID=cds-WP_000660721.1;Parent=gene-CCO57_RS07080;Dbxref=GenBank:WP_000660721.1;Name=WP_000660721.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=CCO57_RS07080;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660721.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 340804 341472 . - . ID=gene-CCO57_RS07085;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=CCO57_RS07085;old_locus_tag=CCO57_07075 NZ_NPMC01000003.1 Protein Homology CDS 340804 341472 . - 0 ID=cds-WP_001520508.1;Parent=gene-CCO57_RS07085;Dbxref=GenBank:WP_001520508.1;Name=WP_001520508.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=CCO57_RS07085;product=GMP/IMP nucleotidase;protein_id=WP_001520508.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 341537 343669 . - . ID=gene-CCO57_RS07090;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=CCO57_RS07090;old_locus_tag=CCO57_07080 NZ_NPMC01000003.1 Protein Homology CDS 341537 343669 . - 0 ID=cds-WP_023205364.1;Parent=gene-CCO57_RS07090;Dbxref=GenBank:WP_023205364.1;Name=WP_023205364.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=CCO57_RS07090;product=intracellular growth attenuator protein IgaA;protein_id=WP_023205364.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 343992 344555 . + . ID=gene-CCO57_RS07095;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=CCO57_RS07095;old_locus_tag=CCO57_07085 NZ_NPMC01000003.1 Protein Homology CDS 343992 344555 . + 0 ID=cds-WP_000045725.1;Parent=gene-CCO57_RS07095;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=CCO57_RS07095;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 344651 347203 . - . ID=gene-CCO57_RS07100;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=CCO57_RS07100;old_locus_tag=CCO57_07090 NZ_NPMC01000003.1 Protein Homology CDS 344651 347203 . - 0 ID=cds-WP_000673812.1;Parent=gene-CCO57_RS07100;Dbxref=GenBank:WP_000673812.1;Name=WP_000673812.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=CCO57_RS07100;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_000673812.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 347324 348103 . + . ID=gene-CCO57_RS07105;Name=CCO57_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07105;old_locus_tag=CCO57_07095 NZ_NPMC01000003.1 Protein Homology CDS 347324 348103 . + 0 ID=cds-WP_076166700.1;Parent=gene-CCO57_RS07105;Dbxref=GenBank:WP_076166700.1;Name=WP_076166700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=CCO57_RS07105;product=DNA utilization protein HofM;protein_id=WP_076166700.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 348103 348642 . + . ID=gene-CCO57_RS07110;Name=CCO57_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07110;old_locus_tag=CCO57_07100 NZ_NPMC01000003.1 Protein Homology CDS 348103 348642 . + 0 ID=cds-WP_094914878.1;Parent=gene-CCO57_RS07110;Dbxref=GenBank:WP_094914878.1;Name=WP_094914878.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=CCO57_RS07110;product=PilN domain-containing protein;protein_id=WP_094914878.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 348626 349099 . + . ID=gene-CCO57_RS07115;Name=CCO57_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07115;old_locus_tag=CCO57_07105 NZ_NPMC01000003.1 Protein Homology CDS 348626 349099 . + 0 ID=cds-WP_094914879.1;Parent=gene-CCO57_RS07115;Dbxref=GenBank:WP_094914879.1;Name=WP_094914879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=CCO57_RS07115;product=hypothetical protein;protein_id=WP_094914879.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 349089 349490 . + . ID=gene-CCO57_RS07120;Name=CCO57_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07120;old_locus_tag=CCO57_07110 NZ_NPMC01000003.1 Protein Homology CDS 349089 349490 . + 0 ID=cds-WP_023208276.1;Parent=gene-CCO57_RS07120;Dbxref=GenBank:WP_023208276.1;Name=WP_023208276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=CCO57_RS07120;product=HofP DNA utilization family protein;protein_id=WP_023208276.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 349405 350643 . + . ID=gene-CCO57_RS07125;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=CCO57_RS07125;old_locus_tag=CCO57_07115 NZ_NPMC01000003.1 Protein Homology CDS 349405 350643 . + 0 ID=cds-WP_058111740.1;Parent=gene-CCO57_RS07125;Dbxref=GenBank:WP_058111740.1;Name=WP_058111740.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=CCO57_RS07125;product=DNA uptake porin HofQ;protein_id=WP_058111740.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 351108 351629 . + . ID=gene-CCO57_RS07140;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=CCO57_RS07140;old_locus_tag=CCO57_07130 NZ_NPMC01000003.1 Protein Homology CDS 351108 351629 . + 0 ID=cds-WP_000818621.1;Parent=gene-CCO57_RS07140;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=CCO57_RS07140;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 351686 352774 . + . ID=gene-CCO57_RS07145;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CCO57_RS07145;old_locus_tag=CCO57_07135 NZ_NPMC01000003.1 Protein Homology CDS 351686 352774 . + 0 ID=cds-WP_094914880.1;Parent=gene-CCO57_RS07145;Dbxref=GenBank:WP_094914880.1;Name=WP_094914880.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=CCO57_RS07145;product=3-dehydroquinate synthase;protein_id=WP_094914880.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 352872 354149 . + . ID=gene-CCO57_RS07150;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=CCO57_RS07150;old_locus_tag=CCO57_07140 NZ_NPMC01000003.1 Protein Homology CDS 352872 354149 . + 0 ID=cds-WP_076935751.1;Parent=gene-CCO57_RS07150;Dbxref=GenBank:WP_076935751.1;Name=WP_076935751.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=CCO57_RS07150;product=cell division protein DamX;protein_id=WP_076935751.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 354330 355166 . + . ID=gene-CCO57_RS07155;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=CCO57_RS07155;old_locus_tag=CCO57_07145 NZ_NPMC01000003.1 Protein Homology CDS 354330 355166 . + 0 ID=cds-WP_000742132.1;Parent=gene-CCO57_RS07155;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=CCO57_RS07155;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 355184 355861 . + . ID=gene-CCO57_RS07160;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CCO57_RS07160;old_locus_tag=CCO57_07150 NZ_NPMC01000003.1 Protein Homology CDS 355184 355861 . + 0 ID=cds-WP_000816283.1;Parent=gene-CCO57_RS07160;Dbxref=GenBank:WP_000816283.1;Name=WP_000816283.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=CCO57_RS07160;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816283.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 355854 356612 . + . ID=gene-CCO57_RS07165;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=CCO57_RS07165;old_locus_tag=CCO57_07155 NZ_NPMC01000003.1 Protein Homology CDS 355854 356612 . + 0 ID=cds-WP_000359647.1;Parent=gene-CCO57_RS07165;Dbxref=GenBank:WP_000359647.1;Name=WP_000359647.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=CCO57_RS07165;product=phosphoglycolate phosphatase;protein_id=WP_000359647.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 356605 357609 . + . ID=gene-CCO57_RS07170;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO57_RS07170;old_locus_tag=CCO57_07160 NZ_NPMC01000003.1 Protein Homology CDS 356605 357609 . + 0 ID=cds-WP_000165562.1;Parent=gene-CCO57_RS07170;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=CCO57_RS07170;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 357755 357925 . - . ID=gene-CCO57_RS07175;Name=CCO57_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07175;old_locus_tag=CCO57_07165 NZ_NPMC01000003.1 Protein Homology CDS 357755 357925 . - 0 ID=cds-WP_000472323.1;Parent=gene-CCO57_RS07175;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=CCO57_RS07175;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 358119 363740 . - . ID=gene-CCO57_RS07180;Name=CCO57_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07180;old_locus_tag=CCO57_07170 NZ_NPMC01000003.1 Protein Homology CDS 358119 363740 . - 0 ID=cds-WP_094914881.1;Parent=gene-CCO57_RS07180;Dbxref=GenBank:WP_094914881.1;Name=WP_094914881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169896.1;locus_tag=CCO57_RS07180;product=autotransporter domain-containing protein;protein_id=WP_094914881.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 364076 365449 . - . ID=gene-CCO57_RS07185;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=CCO57_RS07185;old_locus_tag=CCO57_07175 NZ_NPMC01000003.1 Protein Homology CDS 364076 365449 . - 0 ID=cds-WP_000349904.1;Parent=gene-CCO57_RS07185;Dbxref=GenBank:WP_000349904.1;Name=WP_000349904.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=CCO57_RS07185;product=siroheme synthase CysG;protein_id=WP_000349904.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 365461 366270 . - . ID=gene-CCO57_RS07190;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=CCO57_RS07190;old_locus_tag=CCO57_07180 NZ_NPMC01000003.1 Protein Homology CDS 365461 366270 . - 0 ID=cds-WP_000493576.1;Parent=gene-CCO57_RS07190;Dbxref=GenBank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=CCO57_RS07190;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 366452 366778 . - . ID=gene-CCO57_RS07195;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CCO57_RS07195;old_locus_tag=CCO57_07185 NZ_NPMC01000003.1 Protein Homology CDS 366452 366778 . - 0 ID=cds-WP_000084812.1;Parent=gene-CCO57_RS07195;Dbxref=GenBank:WP_000084812.1;Name=WP_000084812.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=CCO57_RS07195;product=nitrite reductase small subunit NirD;protein_id=WP_000084812.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 366775 369318 . - . ID=gene-CCO57_RS07200;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CCO57_RS07200;old_locus_tag=CCO57_07190 NZ_NPMC01000003.1 Protein Homology CDS 366775 369318 . - 0 ID=cds-WP_000049257.1;Parent=gene-CCO57_RS07200;Dbxref=GenBank:WP_000049257.1;Name=WP_000049257.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=CCO57_RS07200;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049257.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 369638 370819 . - . ID=gene-CCO57_RS07205;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=CCO57_RS07205;old_locus_tag=CCO57_07195 NZ_NPMC01000003.1 Protein Homology CDS 369638 370819 . - 0 ID=cds-WP_000185264.1;Parent=gene-CCO57_RS07205;Dbxref=GenBank:WP_000185264.1;Name=WP_000185264.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=CCO57_RS07205;product=MFS transporter TsgA;protein_id=WP_000185264.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 371096 371668 . + . ID=gene-CCO57_RS07210;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=CCO57_RS07210;old_locus_tag=CCO57_07200 NZ_NPMC01000003.1 Protein Homology CDS 371096 371668 . + 0 ID=cds-WP_000920478.1;Parent=gene-CCO57_RS07210;Dbxref=GenBank:WP_000920478.1;Name=WP_000920478.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=CCO57_RS07210;product=peptidylprolyl isomerase A;protein_id=WP_000920478.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 371782 371949 . + . ID=gene-CCO57_RS07215;Name=CCO57_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07215;old_locus_tag=CCO57_07205 NZ_NPMC01000003.1 Protein Homology CDS 371782 371949 . + 0 ID=cds-WP_001519136.1;Parent=gene-CCO57_RS07215;Dbxref=GenBank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=CCO57_RS07215;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 371939 372541 . + . ID=gene-CCO57_RS07220;Name=CCO57_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07220;old_locus_tag=CCO57_07210 NZ_NPMC01000003.1 Protein Homology CDS 371939 372541 . + 0 ID=cds-WP_001280675.1;Parent=gene-CCO57_RS07220;Dbxref=GenBank:WP_001280675.1;Name=WP_001280675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=CCO57_RS07220;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280675.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 372573 373136 . + . ID=gene-CCO57_RS07225;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=CCO57_RS07225;old_locus_tag=CCO57_07215 NZ_NPMC01000003.1 Protein Homology CDS 372573 373136 . + 0 ID=cds-WP_000601879.1;Parent=gene-CCO57_RS07225;Dbxref=GenBank:WP_000601879.1;Name=WP_000601879.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=CCO57_RS07225;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601879.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 373222 374439 . + . ID=gene-CCO57_RS07230;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=CCO57_RS07230;old_locus_tag=CCO57_07220 NZ_NPMC01000003.1 Protein Homology CDS 373222 374439 . + 0 ID=cds-WP_000190027.1;Parent=gene-CCO57_RS07230;Dbxref=GenBank:WP_000190027.1;Name=WP_000190027.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=CCO57_RS07230;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000190027.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 374482 376569 . - . ID=gene-CCO57_RS07235;Name=CCO57_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07235;old_locus_tag=CCO57_07225 NZ_NPMC01000003.1 Protein Homology CDS 374482 376569 . - 0 ID=cds-WP_000269311.1;Parent=gene-CCO57_RS07235;Dbxref=GenBank:WP_000269311.1;Name=WP_000269311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=CCO57_RS07235;product=YccS/YhfK family putative transporter;protein_id=WP_000269311.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 376618 377250 . - . ID=gene-CCO57_RS07240;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=CCO57_RS07240;old_locus_tag=CCO57_07230 NZ_NPMC01000003.1 Protein Homology CDS 376618 377250 . - 0 ID=cds-WP_000242758.1;Parent=gene-CCO57_RS07240;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=CCO57_RS07240;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 377558 377962 . + . ID=gene-CCO57_RS07245;Name=CCO57_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07245;old_locus_tag=CCO57_07235 NZ_NPMC01000003.1 Protein Homology CDS 377558 377962 . + 0 ID=cds-WP_001148915.1;Parent=gene-CCO57_RS07245;Dbxref=GenBank:WP_001148915.1;Name=WP_001148915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=CCO57_RS07245;product=OsmC family protein;protein_id=WP_001148915.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 378058 378927 . - . ID=gene-CCO57_RS07250;Name=CCO57_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07250;old_locus_tag=CCO57_07240 NZ_NPMC01000003.1 Protein Homology CDS 378058 378927 . - 0 ID=cds-WP_001274690.1;Parent=gene-CCO57_RS07250;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=CCO57_RS07250;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 378979 379197 . - . ID=gene-CCO57_RS07255;Name=CCO57_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07255;old_locus_tag=CCO57_07245 NZ_NPMC01000003.1 Protein Homology CDS 378979 379197 . - 0 ID=cds-WP_000586568.1;Parent=gene-CCO57_RS07255;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=CCO57_RS07255;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 379194 380261 . - . ID=gene-CCO57_RS07260;Name=CCO57_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07260;old_locus_tag=CCO57_07250 NZ_NPMC01000003.1 Protein Homology CDS 379194 380261 . - 0 ID=cds-WP_001214114.1;Parent=gene-CCO57_RS07260;Dbxref=GenBank:WP_001214114.1;Name=WP_001214114.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=CCO57_RS07260;product=hydrolase;protein_id=WP_001214114.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 380459 380770 . + . ID=gene-CCO57_RS07270;Name=CCO57_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07270;old_locus_tag=CCO57_07260 NZ_NPMC01000003.1 Protein Homology CDS 380459 380770 . + 0 ID=cds-WP_000047689.1;Parent=gene-CCO57_RS07270;Dbxref=GenBank:WP_000047689.1;Name=WP_000047689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=CCO57_RS07270;product=monooxygenase;protein_id=WP_000047689.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 380772 380993 . - . ID=gene-CCO57_RS07275;Name=CCO57_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07275;old_locus_tag=CCO57_07265 NZ_NPMC01000003.1 Protein Homology CDS 380772 380993 . - 0 ID=cds-WP_001054030.1;Parent=gene-CCO57_RS07275;Dbxref=GenBank:WP_001054030.1;Name=WP_001054030.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=CCO57_RS07275;product=helix-turn-helix domain-containing protein;protein_id=WP_001054030.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 381009 382916 . - . ID=gene-CCO57_RS07280;Name=CCO57_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07280;old_locus_tag=CCO57_07270 NZ_NPMC01000003.1 Protein Homology CDS 381009 382916 . - 0 ID=cds-WP_000634756.1;Parent=gene-CCO57_RS07280;Dbxref=GenBank:WP_000634756.1;Name=WP_000634756.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=CCO57_RS07280;product=ABC transporter ATP-binding protein;protein_id=WP_000634756.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 383182 383733 . + . ID=gene-CCO57_RS07285;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=CCO57_RS07285;old_locus_tag=CCO57_07275 NZ_NPMC01000003.1 Protein Homology CDS 383182 383733 . + 0 ID=cds-WP_000081820.1;Parent=gene-CCO57_RS07285;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=CCO57_RS07285;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 383733 385538 . + . ID=gene-CCO57_RS07290;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=CCO57_RS07290;old_locus_tag=CCO57_07280 NZ_NPMC01000003.1 Protein Homology CDS 383733 385538 . + 0 ID=cds-WP_094914882.1;Parent=gene-CCO57_RS07290;Dbxref=GenBank:WP_094914882.1;Name=WP_094914882.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=CCO57_RS07290;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_094914882.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 385548 385748 . + . ID=gene-CCO57_RS07295;Name=CCO57_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07295;old_locus_tag=CCO57_07285 NZ_NPMC01000003.1 Protein Homology CDS 385548 385748 . + 0 ID=cds-WP_001007735.1;Parent=gene-CCO57_RS07295;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=CCO57_RS07295;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 385843 386433 . + . ID=gene-CCO57_RS07300;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=CCO57_RS07300;old_locus_tag=CCO57_07290 NZ_NPMC01000003.1 Protein Homology CDS 385843 386433 . + 0 ID=cds-WP_000861341.1;Parent=gene-CCO57_RS07300;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=CCO57_RS07300;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 386621 386839 . - . ID=gene-CCO57_RS07305;Name=CCO57_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07305;old_locus_tag=CCO57_07295 NZ_NPMC01000003.1 Protein Homology CDS 386621 386839 . - 0 ID=cds-WP_001152701.1;Parent=gene-CCO57_RS07305;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=CCO57_RS07305;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 387059 387877 . + . ID=gene-CCO57_RS07310;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=CCO57_RS07310;old_locus_tag=CCO57_07300 NZ_NPMC01000003.1 Protein Homology CDS 387059 387877 . + 0 ID=cds-WP_000838225.1;Parent=gene-CCO57_RS07310;Dbxref=GenBank:WP_000838225.1;Name=WP_000838225.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=CCO57_RS07310;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838225.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 388154 388876 . + . ID=gene-CCO57_RS07315;Name=CCO57_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07315;old_locus_tag=CCO57_07305 NZ_NPMC01000003.1 Protein Homology CDS 388154 388876 . + 0 ID=cds-WP_000091471.1;Parent=gene-CCO57_RS07315;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=CCO57_RS07315;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 388876 389262 . + . ID=gene-CCO57_RS07320;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=CCO57_RS07320;old_locus_tag=CCO57_07310 NZ_NPMC01000003.1 Protein Homology CDS 388876 389262 . + 0 ID=cds-WP_001268010.1;Parent=gene-CCO57_RS07320;Dbxref=GenBank:WP_001268010.1;Name=WP_001268010.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=CCO57_RS07320;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268010.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 389262 389618 . + . ID=gene-CCO57_RS07325;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=CCO57_RS07325;old_locus_tag=CCO57_07315 NZ_NPMC01000003.1 Protein Homology CDS 389262 389618 . + 0 ID=cds-WP_000820705.1;Parent=gene-CCO57_RS07325;Dbxref=GenBank:WP_000820705.1;Name=WP_000820705.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=CCO57_RS07325;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820705.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 389626 389913 . + . ID=gene-CCO57_RS07330;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=CCO57_RS07330;old_locus_tag=CCO57_07320 NZ_NPMC01000003.1 Protein Homology CDS 389626 389913 . + 0 ID=cds-WP_000903398.1;Parent=gene-CCO57_RS07330;Dbxref=GenBank:WP_000903398.1;Name=WP_000903398.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=CCO57_RS07330;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903398.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 390039 390413 . + . ID=gene-CCO57_RS07335;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CCO57_RS07335;old_locus_tag=CCO57_07325 NZ_NPMC01000003.1 Protein Homology CDS 390039 390413 . + 0 ID=cds-WP_000246815.1;Parent=gene-CCO57_RS07335;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=CCO57_RS07335;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 390509 390979 . + . ID=gene-CCO57_RS07340;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CCO57_RS07340;old_locus_tag=CCO57_07330 NZ_NPMC01000003.1 Protein Homology CDS 390509 390979 . + 0 ID=cds-WP_001138042.1;Parent=gene-CCO57_RS07340;Dbxref=GenBank:WP_001138042.1;Name=WP_001138042.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=CCO57_RS07340;product=30S ribosomal protein S7;protein_id=WP_001138042.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 391076 393190 . + . ID=gene-CCO57_RS07345;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CCO57_RS07345;old_locus_tag=CCO57_07335 NZ_NPMC01000003.1 Protein Homology CDS 391076 393190 . + 0 ID=cds-WP_000124693.1;Parent=gene-CCO57_RS07345;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=CCO57_RS07345;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_NPMC01000003.1 RefSeq gene 393262 393523 . + . ID=gene-CCO57_RS07350;Name=CCO57_RS07350;end_range=393523,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07350;old_locus_tag=CCO57_07340;partial=true NZ_NPMC01000003.1 Protein Homology CDS 393262 393523 . + 0 ID=cds-WP_000031674.1;Parent=gene-CCO57_RS07350;Dbxref=GenBank:WP_000031674.1;Name=WP_000031674.1;Ontology_term=GO:0003924,GO:0005525;end_range=393523,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO57_RS07350;partial=true;product=GTP-binding protein;protein_id=WP_000031674.1;transl_table=11 ##sequence-region NZ_NPMC01000030.1 1 5657 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000030.1 RefSeq region 1 5657 . + . ID=NZ_NPMC01000030.1:1..5657;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000030.1 RefSeq gene 1 875 . - . ID=gene-CCO57_RS23805;Name=CCO57_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23805;old_locus_tag=CCO57_23765;partial=true;start_range=.,1 NZ_NPMC01000030.1 Protein Homology CDS 1 875 . - 0 ID=cds-WP_094915210.1;Parent=gene-CCO57_RS23805;Dbxref=GenBank:WP_094915210.1;Name=WP_094915210.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=CCO57_RS23805;partial=true;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_094915210.1;start_range=.,1;transl_table=11 NZ_NPMC01000030.1 RefSeq gene 872 1429 . - . ID=gene-CCO57_RS23810;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=CCO57_RS23810;old_locus_tag=CCO57_23770 NZ_NPMC01000030.1 Protein Homology CDS 872 1429 . - 0 ID=cds-WP_000828298.1;Parent=gene-CCO57_RS23810;Dbxref=GenBank:WP_000828298.1;Name=WP_000828298.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=CCO57_RS23810;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828298.1;transl_table=11 NZ_NPMC01000030.1 RefSeq gene 1426 3357 . - . ID=gene-CCO57_RS23815;Name=CCO57_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23815;old_locus_tag=CCO57_23775 NZ_NPMC01000030.1 Protein Homology CDS 1426 3357 . - 0 ID=cds-WP_094915211.1;Parent=gene-CCO57_RS23815;Dbxref=GenBank:WP_094915211.1;Name=WP_094915211.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=CCO57_RS23815;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_094915211.1;transl_table=11 NZ_NPMC01000030.1 RefSeq gene 3354 3833 . - . ID=gene-CCO57_RS23820;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=CCO57_RS23820;old_locus_tag=CCO57_23780 NZ_NPMC01000030.1 Protein Homology CDS 3354 3833 . - 0 ID=cds-WP_001053619.1;Parent=gene-CCO57_RS23820;Dbxref=GenBank:WP_001053619.1;Name=WP_001053619.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=CCO57_RS23820;product=cytochrome c maturation protein CcmE;protein_id=WP_001053619.1;transl_table=11 NZ_NPMC01000030.1 RefSeq gene 3830 4042 . - . ID=gene-CCO57_RS23825;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=CCO57_RS23825;old_locus_tag=CCO57_23785 NZ_NPMC01000030.1 Protein Homology CDS 3830 4042 . - 0 ID=cds-WP_000074113.1;Parent=gene-CCO57_RS23825;Dbxref=GenBank:WP_000074113.1;Name=WP_000074113.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=CCO57_RS23825;product=heme exporter protein CcmD;protein_id=WP_000074113.1;transl_table=11 NZ_NPMC01000030.1 RefSeq gene 4039 4776 . - . ID=gene-CCO57_RS23830;Name=CCO57_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23830;old_locus_tag=CCO57_23790 NZ_NPMC01000030.1 Protein Homology CDS 4039 4776 . - 0 ID=cds-WP_094915212.1;Parent=gene-CCO57_RS23830;Dbxref=GenBank:WP_094915212.1;Name=WP_094915212.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO57_RS23830;product=heme ABC transporter permease;protein_id=WP_094915212.1;transl_table=11 NZ_NPMC01000030.1 RefSeq gene 4828 5487 . - . ID=gene-CCO57_RS23835;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO57_RS23835;old_locus_tag=CCO57_23795 NZ_NPMC01000030.1 Protein Homology CDS 4828 5487 . - 0 ID=cds-WP_000990033.1;Parent=gene-CCO57_RS23835;Dbxref=GenBank:WP_000990033.1;Name=WP_000990033.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO57_RS23835;product=heme exporter protein CcmB;protein_id=WP_000990033.1;transl_table=11 NZ_NPMC01000030.1 RefSeq pseudogene 5484 5657 . - . ID=gene-CCO57_RS24780;Name=CCO57_RS24780;end_range=5657,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24780;old_locus_tag=CCO57_23800;partial=true;pseudo=true NZ_NPMC01000030.1 Protein Homology CDS 5484 5657 . - 0 ID=cds-CCO57_RS24780;Parent=gene-CCO57_RS24780;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5657,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=CCO57_RS24780;partial=true;product=heme ABC transporter ATP-binding protein CcmA;pseudo=true;transl_table=11 ##sequence-region NZ_NPMC01000031.1 1 4649 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000031.1 RefSeq region 1 4649 . + . ID=NZ_NPMC01000031.1:1..4649;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000031.1 RefSeq gene 1 80 . + . ID=gene-CCO57_RS25075;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO57_RS25075;partial=true;start_range=.,1 NZ_NPMC01000031.1 cmsearch rRNA 1 80 . + . ID=rna-CCO57_RS25075;Parent=gene-CCO57_RS25075;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS25075;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_NPMC01000031.1 cmsearch exon 1 80 . + . ID=exon-CCO57_RS25075-1;Parent=rna-CCO57_RS25075;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS25075;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_NPMC01000031.1 RefSeq gene 458 1486 . + . ID=gene-CCO57_RS23850;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CCO57_RS23850;old_locus_tag=CCO57_23810 NZ_NPMC01000031.1 Protein Homology CDS 458 1486 . + 0 ID=cds-WP_000149794.1;Parent=gene-CCO57_RS23850;Dbxref=GenBank:WP_000149794.1;Name=WP_000149794.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=CCO57_RS23850;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149794.1;transl_table=11 NZ_NPMC01000031.1 RefSeq gene 1483 2445 . + . ID=gene-CCO57_RS23855;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=CCO57_RS23855;old_locus_tag=CCO57_23815 NZ_NPMC01000031.1 Protein Homology CDS 1483 2445 . + 0 ID=cds-WP_079948201.1;Parent=gene-CCO57_RS23855;Dbxref=GenBank:WP_079948201.1;Name=WP_079948201.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=CCO57_RS23855;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_079948201.1;transl_table=11 NZ_NPMC01000031.1 RefSeq gene 2479 3429 . - . ID=gene-CCO57_RS23860;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=CCO57_RS23860;old_locus_tag=CCO57_23820 NZ_NPMC01000031.1 Protein Homology CDS 2479 3429 . - 0 ID=cds-WP_000023068.1;Parent=gene-CCO57_RS23860;Dbxref=GenBank:WP_000023068.1;Name=WP_000023068.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=CCO57_RS23860;product=type I pantothenate kinase;protein_id=WP_000023068.1;transl_table=11 NZ_NPMC01000031.1 RefSeq gene 3638 3811 . - . ID=gene-CCO57_RS23870;Name=CCO57_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23870;old_locus_tag=CCO57_23830 NZ_NPMC01000031.1 Protein Homology CDS 3638 3811 . - 0 ID=cds-WP_001541267.1;Parent=gene-CCO57_RS23870;Dbxref=GenBank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=CCO57_RS23870;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11 NZ_NPMC01000031.1 RefSeq gene 3831 3906 . + . ID=gene-CCO57_RS23875;Name=CCO57_RS23875;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS23875;old_locus_tag=CCO57_23835 NZ_NPMC01000031.1 tRNAscan-SE tRNA 3831 3906 . + . ID=rna-CCO57_RS23875;Parent=gene-CCO57_RS23875;anticodon=(pos:3864..3866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23875;product=tRNA-Thr NZ_NPMC01000031.1 tRNAscan-SE exon 3831 3906 . + . ID=exon-CCO57_RS23875-1;Parent=rna-CCO57_RS23875;anticodon=(pos:3864..3866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23875;product=tRNA-Thr NZ_NPMC01000031.1 RefSeq gene 3915 3999 . + . ID=gene-CCO57_RS23880;Name=CCO57_RS23880;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS23880;old_locus_tag=CCO57_23840 NZ_NPMC01000031.1 tRNAscan-SE tRNA 3915 3999 . + . ID=rna-CCO57_RS23880;Parent=gene-CCO57_RS23880;anticodon=(pos:3949..3951);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23880;product=tRNA-Tyr NZ_NPMC01000031.1 tRNAscan-SE exon 3915 3999 . + . ID=exon-CCO57_RS23880-1;Parent=rna-CCO57_RS23880;anticodon=(pos:3949..3951);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23880;product=tRNA-Tyr NZ_NPMC01000031.1 RefSeq gene 4116 4190 . + . ID=gene-CCO57_RS23885;Name=CCO57_RS23885;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS23885;old_locus_tag=CCO57_23845 NZ_NPMC01000031.1 tRNAscan-SE tRNA 4116 4190 . + . ID=rna-CCO57_RS23885;Parent=gene-CCO57_RS23885;anticodon=(pos:4149..4151);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23885;product=tRNA-Gly NZ_NPMC01000031.1 tRNAscan-SE exon 4116 4190 . + . ID=exon-CCO57_RS23885-1;Parent=rna-CCO57_RS23885;anticodon=(pos:4149..4151);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23885;product=tRNA-Gly NZ_NPMC01000031.1 RefSeq gene 4197 4272 . + . ID=gene-CCO57_RS23890;Name=CCO57_RS23890;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS23890;old_locus_tag=CCO57_23850 NZ_NPMC01000031.1 tRNAscan-SE tRNA 4197 4272 . + . ID=rna-CCO57_RS23890;Parent=gene-CCO57_RS23890;anticodon=(pos:4230..4232);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23890;product=tRNA-Thr NZ_NPMC01000031.1 tRNAscan-SE exon 4197 4272 . + . ID=exon-CCO57_RS23890-1;Parent=rna-CCO57_RS23890;anticodon=(pos:4230..4232);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23890;product=tRNA-Thr NZ_NPMC01000031.1 RefSeq gene 4388 4649 . + . ID=gene-CCO57_RS23895;Name=CCO57_RS23895;end_range=4649,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23895;old_locus_tag=CCO57_23855;partial=true NZ_NPMC01000031.1 Protein Homology CDS 4388 4649 . + 0 ID=cds-WP_000031674.1-2;Parent=gene-CCO57_RS23895;Dbxref=GenBank:WP_000031674.1;Name=WP_000031674.1;Ontology_term=GO:0003924,GO:0005525;end_range=4649,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO57_RS23895;partial=true;product=GTP-binding protein;protein_id=WP_000031674.1;transl_table=11 ##sequence-region NZ_NPMC01000032.1 1 1312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000032.1 RefSeq region 1 1312 . + . ID=NZ_NPMC01000032.1:1..1312;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000032.1 RefSeq gene 4 1259 . - . ID=gene-CCO57_RS23900;Name=CCO57_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23900;old_locus_tag=CCO57_23860 NZ_NPMC01000032.1 Protein Homology CDS 908 1259 . - 0 ID=cds-WP_094915213.1;Parent=gene-CCO57_RS23900;Dbxref=GenBank:WP_094915213.1;Name=WP_094915213.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO57_RS23900;product=IS3-like element ISSen1 family transposase;protein_id=WP_094915213.1;transl_table=11 NZ_NPMC01000032.1 Protein Homology CDS 4 908 . - 2 ID=cds-WP_094915213.1;Parent=gene-CCO57_RS23900;Dbxref=GenBank:WP_094915213.1;Name=WP_094915213.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO57_RS23900;product=IS3-like element ISSen1 family transposase;protein_id=WP_094915213.1;transl_table=11 ##sequence-region NZ_NPMC01000033.1 1 1192 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000033.1 RefSeq region 1 1192 . + . ID=NZ_NPMC01000033.1:1..1192;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000033.1 RefSeq gene 25 1192 . - . ID=gene-CCO57_RS23905;Name=CCO57_RS23905;end_range=1192,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS23905;old_locus_tag=CCO57_23865;partial=true NZ_NPMC01000033.1 cmsearch rRNA 25 1192 . - . ID=rna-CCO57_RS23905;Parent=gene-CCO57_RS23905;Dbxref=RFAM:RF02541;end_range=1192,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23905;partial=true;product=23S ribosomal RNA NZ_NPMC01000033.1 cmsearch exon 25 1192 . - . ID=exon-CCO57_RS23905-1;Parent=rna-CCO57_RS23905;Dbxref=RFAM:RF02541;end_range=1192,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23905;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPMC01000034.1 1 1079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000034.1 RefSeq region 1 1079 . + . ID=NZ_NPMC01000034.1:1..1079;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000034.1 RefSeq gene 79 1079 . + . ID=gene-CCO57_RS23910;Name=CCO57_RS23910;end_range=1079,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS23910;old_locus_tag=CCO57_23870;partial=true NZ_NPMC01000034.1 cmsearch rRNA 79 1079 . + . ID=rna-CCO57_RS23910;Parent=gene-CCO57_RS23910;Dbxref=RFAM:RF00177;end_range=1079,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23910;partial=true;product=16S ribosomal RNA NZ_NPMC01000034.1 cmsearch exon 79 1079 . + . ID=exon-CCO57_RS23910-1;Parent=rna-CCO57_RS23910;Dbxref=RFAM:RF00177;end_range=1079,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23910;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPMC01000035.1 1 1043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000035.1 RefSeq region 1 1043 . + . ID=NZ_NPMC01000035.1:1..1043;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000035.1 RefSeq gene 1 1043 . + . ID=gene-CCO57_RS23915;Name=tuf;end_range=1043,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CCO57_RS23915;old_locus_tag=CCO57_23875;partial=true;start_range=.,1 NZ_NPMC01000035.1 Protein Homology CDS 1 1043 . + 0 ID=cds-WP_016740776.1;Parent=gene-CCO57_RS23915;Dbxref=GenBank:WP_016740776.1;Name=WP_016740776.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=1043,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=CCO57_RS23915;partial=true;product=elongation factor Tu;protein_id=WP_016740776.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPMC01000036.1 1 943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000036.1 RefSeq region 1 943 . + . ID=NZ_NPMC01000036.1:1..943;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000036.1 RefSeq gene 196 943 . + . ID=gene-CCO57_RS23920;Name=CCO57_RS23920;end_range=943,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23920;old_locus_tag=CCO57_23880;partial=true NZ_NPMC01000036.1 Protein Homology CDS 196 943 . + 0 ID=cds-WP_094915214.1;Parent=gene-CCO57_RS23920;Dbxref=GenBank:WP_094915214.1;Name=WP_094915214.1;end_range=943,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000791811.1;locus_tag=CCO57_RS23920;partial=true;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_094915214.1;transl_table=11 ##sequence-region NZ_NPMC01000037.1 1 904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000037.1 RefSeq region 1 904 . + . ID=NZ_NPMC01000037.1:1..904;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000037.1 RefSeq gene 196 904 . + . ID=gene-CCO57_RS23925;Name=CCO57_RS23925;end_range=904,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23925;old_locus_tag=CCO57_23885;partial=true NZ_NPMC01000037.1 Protein Homology CDS 196 904 . + 0 ID=cds-WP_094915215.1;Parent=gene-CCO57_RS23925;Dbxref=GenBank:WP_094915215.1;Name=WP_094915215.1;end_range=904,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000791808.1;locus_tag=CCO57_RS23925;partial=true;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_094915215.1;transl_table=11 ##sequence-region NZ_NPMC01000038.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000038.1 RefSeq region 1 792 . + . ID=NZ_NPMC01000038.1:1..792;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000038.1 RefSeq pseudogene 1 728 . - . ID=gene-CCO57_RS23930;Name=CCO57_RS23930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS23930;old_locus_tag=CCO57_23890;partial=true;pseudo=true;start_range=.,1 NZ_NPMC01000038.1 Protein Homology CDS 1 728 . - 0 ID=cds-CCO57_RS23930;Parent=gene-CCO57_RS23930;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=CCO57_RS23930;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_NPMC01000039.1 1 689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000039.1 RefSeq region 1 689 . + . ID=NZ_NPMC01000039.1:1..689;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000039.1 RefSeq pseudogene 1 71 . - . ID=gene-CCO57_RS25080;Name=CCO57_RS25080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS25080;old_locus_tag=CCO57_23895;partial=true;pseudo=true;start_range=.,1 NZ_NPMC01000039.1 Protein Homology CDS 1 71 . - 0 ID=cds-CCO57_RS25080;Parent=gene-CCO57_RS25080;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219490.1;locus_tag=CCO57_RS25080;partial=true;product=Lrp/AsnC family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_NPMC01000039.1 RefSeq gene 204 689 . - . ID=gene-CCO57_RS23940;Name=CCO57_RS23940;end_range=689,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS23940;old_locus_tag=CCO57_23900;partial=true NZ_NPMC01000039.1 Protein Homology CDS 204 689 . - 0 ID=cds-WP_272897217.1;Parent=gene-CCO57_RS23940;Dbxref=GenBank:WP_272897217.1;Name=WP_272897217.1;end_range=689,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543176.1;locus_tag=CCO57_RS23940;partial=true;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_272897217.1;transl_table=11 ##sequence-region NZ_NPMC01000004.1 1 391298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000004.1 RefSeq region 1 391298 . + . ID=NZ_NPMC01000004.1:1..391298;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000004.1 RefSeq gene 1 571 . - . ID=gene-CCO57_RS07355;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO57_RS07355;old_locus_tag=CCO57_07345;partial=true;start_range=.,1 NZ_NPMC01000004.1 Protein Homology CDS 1 571 . - 0 ID=cds-WP_094914885.1;Parent=gene-CCO57_RS07355;Dbxref=GenBank:WP_094914885.1;Name=WP_094914885.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=CCO57_RS07355;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_094914885.1;start_range=.,1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 592 1194 . - . ID=gene-CCO57_RS07360;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=CCO57_RS07360;old_locus_tag=CCO57_07350 NZ_NPMC01000004.1 Protein Homology CDS 592 1194 . - 0 ID=cds-WP_000431778.1;Parent=gene-CCO57_RS07360;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=CCO57_RS07360;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 1204 1653 . - . ID=gene-CCO57_RS07365;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=CCO57_RS07365;old_locus_tag=CCO57_07355 NZ_NPMC01000004.1 Protein Homology CDS 1204 1653 . - 0 ID=cds-WP_000835182.1;Parent=gene-CCO57_RS07365;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=CCO57_RS07365;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 1769 2638 . - . ID=gene-CCO57_RS07370;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=CCO57_RS07370;old_locus_tag=CCO57_07360 NZ_NPMC01000004.1 Protein Homology CDS 1769 2638 . - 0 ID=cds-WP_001618534.1;Parent=gene-CCO57_RS07370;Dbxref=GenBank:WP_001618534.1;Name=WP_001618534.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=CCO57_RS07370;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_001618534.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 2625 3320 . - . ID=gene-CCO57_RS07375;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=CCO57_RS07375;old_locus_tag=CCO57_07365 NZ_NPMC01000004.1 Protein Homology CDS 2625 3320 . - 0 ID=cds-WP_000091673.1;Parent=gene-CCO57_RS07375;Dbxref=GenBank:WP_000091673.1;Name=WP_000091673.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=CCO57_RS07375;product=ferredoxin-type protein NapG;protein_id=WP_000091673.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 3327 5813 . - . ID=gene-CCO57_RS07380;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=CCO57_RS07380;old_locus_tag=CCO57_07370 NZ_NPMC01000004.1 Protein Homology CDS 3327 5813 . - 0 ID=cds-WP_000778100.1;Parent=gene-CCO57_RS07380;Dbxref=GenBank:WP_000778100.1;Name=WP_000778100.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=CCO57_RS07380;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778100.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 5810 6073 . - . ID=gene-CCO57_RS07385;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=CCO57_RS07385;old_locus_tag=CCO57_07375 NZ_NPMC01000004.1 Protein Homology CDS 5810 6073 . - 0 ID=cds-WP_001260056.1;Parent=gene-CCO57_RS07385;Dbxref=GenBank:WP_001260056.1;Name=WP_001260056.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=CCO57_RS07385;product=chaperone NapD;protein_id=WP_001260056.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 6063 6554 . - . ID=gene-CCO57_RS07390;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=CCO57_RS07390;old_locus_tag=CCO57_07380 NZ_NPMC01000004.1 Protein Homology CDS 6063 6554 . - 0 ID=cds-WP_000228062.1;Parent=gene-CCO57_RS07390;Dbxref=GenBank:WP_000228062.1;Name=WP_000228062.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=CCO57_RS07390;product=ferredoxin-type protein NapF;protein_id=WP_000228062.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 6968 7462 . + . ID=gene-CCO57_RS07395;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=CCO57_RS07395;old_locus_tag=CCO57_07385 NZ_NPMC01000004.1 Protein Homology CDS 6968 7462 . + 0 ID=cds-WP_001550295.1;Parent=gene-CCO57_RS07395;Dbxref=GenBank:WP_001550295.1;Name=WP_001550295.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=CCO57_RS07395;product=serine protease inhibitor ecotin;protein_id=WP_001550295.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 7671 9314 . - . ID=gene-CCO57_RS07400;Name=CCO57_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07400;old_locus_tag=CCO57_07390 NZ_NPMC01000004.1 Protein Homology CDS 7671 9314 . - 0 ID=cds-WP_000421586.1;Parent=gene-CCO57_RS07400;Dbxref=GenBank:WP_000421586.1;Name=WP_000421586.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=CCO57_RS07400;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_000421586.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 9390 10040 . - . ID=gene-CCO57_RS07405;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=CCO57_RS07405;old_locus_tag=CCO57_07395 NZ_NPMC01000004.1 Protein Homology CDS 9390 10040 . - 0 ID=cds-WP_000884989.1;Parent=gene-CCO57_RS07405;Dbxref=GenBank:WP_000884989.1;Name=WP_000884989.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=CCO57_RS07405;product=DNA oxidative demethylase AlkB;protein_id=WP_000884989.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 10043 11104 . - . ID=gene-CCO57_RS07410;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=CCO57_RS07410;old_locus_tag=CCO57_07400 NZ_NPMC01000004.1 Protein Homology CDS 10043 11104 . - 0 ID=cds-WP_000975979.1;Parent=gene-CCO57_RS07410;Dbxref=GenBank:WP_000975979.1;Name=WP_000975979.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=CCO57_RS07410;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975979.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 11185 12237 . - . ID=gene-CCO57_RS07415;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=CCO57_RS07415;old_locus_tag=CCO57_07405 NZ_NPMC01000004.1 Protein Homology CDS 11185 12237 . - 0 ID=cds-WP_000784297.1;Parent=gene-CCO57_RS07415;Dbxref=GenBank:WP_000784297.1;Name=WP_000784297.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=CCO57_RS07415;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784297.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 12352 13488 . - . ID=gene-CCO57_RS07420;Name=CCO57_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07420;old_locus_tag=CCO57_07410 NZ_NPMC01000004.1 Protein Homology CDS 12352 13488 . - 0 ID=cds-WP_000865526.1;Parent=gene-CCO57_RS07420;Dbxref=GenBank:WP_000865526.1;Name=WP_000865526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=CCO57_RS07420;product=porin OmpC;protein_id=WP_000865526.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 14216 16885 . + . ID=gene-CCO57_RS07430;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=CCO57_RS07430;old_locus_tag=CCO57_07420 NZ_NPMC01000004.1 Protein Homology CDS 14216 16885 . + 0 ID=cds-WP_023231229.1;Parent=gene-CCO57_RS07430;Dbxref=GenBank:WP_023231229.1;Name=WP_023231229.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=CCO57_RS07430;product=phosphotransferase RcsD;protein_id=WP_023231229.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 16902 17552 . + . ID=gene-CCO57_RS07435;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=CCO57_RS07435;old_locus_tag=CCO57_07425 NZ_NPMC01000004.1 Protein Homology CDS 16902 17552 . + 0 ID=cds-WP_001061919.1;Parent=gene-CCO57_RS07435;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=CCO57_RS07435;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 17656 20502 . - . ID=gene-CCO57_RS07440;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=CCO57_RS07440;old_locus_tag=CCO57_07430 NZ_NPMC01000004.1 Protein Homology CDS 17656 20502 . - 0 ID=cds-WP_023225810.1;Parent=gene-CCO57_RS07440;Dbxref=GenBank:WP_023225810.1;Name=WP_023225810.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=CCO57_RS07440;product=two-component system sensor histidine kinase RcsC;protein_id=WP_023225810.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 20620 23256 . - . ID=gene-CCO57_RS07445;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CCO57_RS07445;old_locus_tag=CCO57_07435 NZ_NPMC01000004.1 Protein Homology CDS 20620 23256 . - 0 ID=cds-WP_001281271.1;Parent=gene-CCO57_RS07445;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=CCO57_RS07445;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 23666 24868 . - . ID=gene-CCO57_RS07455;Name=CCO57_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07455;old_locus_tag=CCO57_07445 NZ_NPMC01000004.1 Protein Homology CDS 23666 24868 . - 0 ID=cds-WP_000705581.1;Parent=gene-CCO57_RS07455;Dbxref=GenBank:WP_000705581.1;Name=WP_000705581.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=CCO57_RS07455;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705581.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 24883 26208 . - . ID=gene-CCO57_RS07460;Name=CCO57_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07460;old_locus_tag=CCO57_07450 NZ_NPMC01000004.1 Protein Homology CDS 24883 26208 . - 0 ID=cds-WP_000098081.1;Parent=gene-CCO57_RS07460;Dbxref=GenBank:WP_000098081.1;Name=WP_000098081.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=CCO57_RS07460;product=MFS transporter;protein_id=WP_000098081.1;transl_table=11 NZ_NPMC01000004.1 RefSeq pseudogene 26258 27122 . + . ID=gene-CCO57_RS07465;Name=CCO57_RS07465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS07465;old_locus_tag=CCO57_07455;pseudo=true NZ_NPMC01000004.1 Protein Homology CDS 26258 27122 . + 0 ID=cds-CCO57_RS07465;Parent=gene-CCO57_RS07465;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=CCO57_RS07465;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 27205 27933 . + . ID=gene-CCO57_RS07470;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=CCO57_RS07470;old_locus_tag=CCO57_07460 NZ_NPMC01000004.1 Protein Homology CDS 27205 27933 . + 0 ID=cds-WP_001091009.1;Parent=gene-CCO57_RS07470;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=CCO57_RS07470;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 28289 30574 . + . ID=gene-CCO57_RS07475;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=CCO57_RS07475;old_locus_tag=CCO57_07465 NZ_NPMC01000004.1 Protein Homology CDS 28289 30574 . + 0 ID=cds-WP_001076491.1;Parent=gene-CCO57_RS07475;Dbxref=GenBank:WP_001076491.1;Name=WP_001076491.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=CCO57_RS07475;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076491.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 30687 31817 . + . ID=gene-CCO57_RS07480;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=CCO57_RS07480;old_locus_tag=CCO57_07470 NZ_NPMC01000004.1 Protein Homology CDS 30687 31817 . + 0 ID=cds-WP_000332026.1;Parent=gene-CCO57_RS07480;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=CCO57_RS07480;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 31817 32071 . + . ID=gene-CCO57_RS07485;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=CCO57_RS07485;old_locus_tag=CCO57_07475 NZ_NPMC01000004.1 Protein Homology CDS 31817 32071 . + 0 ID=cds-WP_000533921.1;Parent=gene-CCO57_RS07485;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=CCO57_RS07485;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 32073 33263 . - . ID=gene-CCO57_RS07490;Name=CCO57_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07490;old_locus_tag=CCO57_07480 NZ_NPMC01000004.1 Protein Homology CDS 32073 33263 . - 0 ID=cds-WP_023214986.1;Parent=gene-CCO57_RS07490;Dbxref=GenBank:WP_023214986.1;Name=WP_023214986.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=CCO57_RS07490;product=MFS transporter;protein_id=WP_023214986.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 33424 34302 . + . ID=gene-CCO57_RS07495;Name=CCO57_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07495;old_locus_tag=CCO57_07485 NZ_NPMC01000004.1 Protein Homology CDS 33424 34302 . + 0 ID=cds-WP_000176721.1;Parent=gene-CCO57_RS07495;Dbxref=GenBank:WP_000176721.1;Name=WP_000176721.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=CCO57_RS07495;product=LysR family transcriptional regulator;protein_id=WP_000176721.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 34418 35488 . - . ID=gene-CCO57_RS07500;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=CCO57_RS07500;old_locus_tag=CCO57_07490 NZ_NPMC01000004.1 Protein Homology CDS 34418 35488 . - 0 ID=cds-WP_000858946.1;Parent=gene-CCO57_RS07500;Dbxref=GenBank:WP_000858946.1;Name=WP_000858946.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=CCO57_RS07500;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858946.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 35493 36851 . - . ID=gene-CCO57_RS07505;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CCO57_RS07505;old_locus_tag=CCO57_07495 NZ_NPMC01000004.1 Protein Homology CDS 35493 36851 . - 0 ID=cds-WP_000948739.1;Parent=gene-CCO57_RS07505;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=CCO57_RS07505;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 37124 38752 . + . ID=gene-CCO57_RS07510;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=CCO57_RS07510;old_locus_tag=CCO57_07500 NZ_NPMC01000004.1 Protein Homology CDS 37124 38752 . + 0 ID=cds-WP_000857207.1;Parent=gene-CCO57_RS07510;Dbxref=GenBank:WP_000857207.1;Name=WP_000857207.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=CCO57_RS07510;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857207.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 38742 40001 . + . ID=gene-CCO57_RS07515;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=CCO57_RS07515;old_locus_tag=CCO57_07505 NZ_NPMC01000004.1 Protein Homology CDS 38742 40001 . + 0 ID=cds-WP_000667152.1;Parent=gene-CCO57_RS07515;Dbxref=GenBank:WP_000667152.1;Name=WP_000667152.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=CCO57_RS07515;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667152.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 39998 41188 . + . ID=gene-CCO57_RS07520;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=CCO57_RS07520;old_locus_tag=CCO57_07510 NZ_NPMC01000004.1 Protein Homology CDS 39998 41188 . + 0 ID=cds-WP_001285726.1;Parent=gene-CCO57_RS07520;Dbxref=GenBank:WP_001285726.1;Name=WP_001285726.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=CCO57_RS07520;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285726.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 41614 42636 . + . ID=gene-CCO57_RS07530;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=CCO57_RS07530;old_locus_tag=CCO57_07520 NZ_NPMC01000004.1 Protein Homology CDS 41614 42636 . + 0 ID=cds-WP_001017718.1;Parent=gene-CCO57_RS07530;Dbxref=GenBank:WP_001017718.1;Name=WP_001017718.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=CCO57_RS07530;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_001017718.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 42870 43046 . - . ID=gene-CCO57_RS07535;Name=CCO57_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07535;old_locus_tag=CCO57_07525 NZ_NPMC01000004.1 Protein Homology CDS 42870 43046 . - 0 ID=cds-WP_001112766.1;Parent=gene-CCO57_RS07535;Dbxref=GenBank:WP_001112766.1;Name=WP_001112766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=CCO57_RS07535;product=hypothetical protein;protein_id=WP_001112766.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 43052 43855 . - . ID=gene-CCO57_RS07540;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=CCO57_RS07540;old_locus_tag=CCO57_07530 NZ_NPMC01000004.1 Protein Homology CDS 43052 43855 . - 0 ID=cds-WP_000992941.1;Parent=gene-CCO57_RS07540;Dbxref=GenBank:WP_000992941.1;Name=WP_000992941.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=CCO57_RS07540;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992941.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 43881 45170 . - . ID=gene-CCO57_RS07545;Name=CCO57_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07545;old_locus_tag=CCO57_07535 NZ_NPMC01000004.1 Protein Homology CDS 43881 45170 . - 0 ID=cds-WP_000028928.1;Parent=gene-CCO57_RS07545;Dbxref=GenBank:WP_000028928.1;Name=WP_000028928.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=CCO57_RS07545;product=MFS transporter;protein_id=WP_000028928.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 45226 46431 . - . ID=gene-CCO57_RS07550;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=CCO57_RS07550;old_locus_tag=CCO57_07540 NZ_NPMC01000004.1 Protein Homology CDS 45226 46431 . - 0 ID=cds-WP_001530644.1;Parent=gene-CCO57_RS07550;Dbxref=GenBank:WP_001530644.1;Name=WP_001530644.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=CCO57_RS07550;product=L-rhamnonate dehydratase;protein_id=WP_001530644.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 46445 47227 . - . ID=gene-CCO57_RS07555;Name=CCO57_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07555;old_locus_tag=CCO57_07545 NZ_NPMC01000004.1 Protein Homology CDS 46445 47227 . - 0 ID=cds-WP_021000541.1;Parent=gene-CCO57_RS07555;Dbxref=GenBank:WP_021000541.1;Name=WP_021000541.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=CCO57_RS07555;product=IclR family transcriptional regulator;protein_id=WP_021000541.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 47477 48673 . - . ID=gene-CCO57_RS07560;Name=CCO57_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07560;old_locus_tag=CCO57_07550 NZ_NPMC01000004.1 Protein Homology CDS 47477 48673 . - 0 ID=cds-WP_000935685.1;Parent=gene-CCO57_RS07560;Dbxref=GenBank:WP_000935685.1;Name=WP_000935685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=CCO57_RS07560;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000935685.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 48788 49330 . - . ID=gene-CCO57_RS07565;Name=CCO57_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07565;old_locus_tag=CCO57_07555 NZ_NPMC01000004.1 Protein Homology CDS 48788 49330 . - 0 ID=cds-WP_001562414.1;Parent=gene-CCO57_RS07565;Dbxref=GenBank:WP_001562414.1;Name=WP_001562414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=CCO57_RS07565;product=YfaZ family outer membrane protein;protein_id=WP_001562414.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 49609 50034 . + . ID=gene-CCO57_RS07570;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=CCO57_RS07570;old_locus_tag=CCO57_07560 NZ_NPMC01000004.1 Protein Homology CDS 49609 50034 . + 0 ID=cds-WP_001249905.1;Parent=gene-CCO57_RS07570;Dbxref=GenBank:WP_001249905.1;Name=WP_001249905.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=CCO57_RS07570;product=nucleoside triphosphatase NudI;protein_id=WP_001249905.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 50080 50685 . - . ID=gene-CCO57_RS07575;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=CCO57_RS07575;old_locus_tag=CCO57_07565 NZ_NPMC01000004.1 Protein Homology CDS 50080 50685 . - 0 ID=cds-WP_000879257.1;Parent=gene-CCO57_RS07575;Dbxref=GenBank:WP_000879257.1;Name=WP_000879257.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=CCO57_RS07575;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879257.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 50984 52123 . + . ID=gene-CCO57_RS07580;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=CCO57_RS07580;old_locus_tag=CCO57_07570 NZ_NPMC01000004.1 Protein Homology CDS 50984 52123 . + 0 ID=cds-WP_001279301.1;Parent=gene-CCO57_RS07580;Dbxref=GenBank:WP_001279301.1;Name=WP_001279301.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=CCO57_RS07580;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001279301.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 52126 53109 . + . ID=gene-CCO57_RS07585;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=CCO57_RS07585;old_locus_tag=CCO57_07575 NZ_NPMC01000004.1 Protein Homology CDS 52126 53109 . + 0 ID=cds-WP_000458893.1;Parent=gene-CCO57_RS07585;Dbxref=GenBank:WP_000458893.1;Name=WP_000458893.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=CCO57_RS07585;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458893.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 53106 55088 . + . ID=gene-CCO57_RS07590;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=CCO57_RS07590;old_locus_tag=CCO57_07580 NZ_NPMC01000004.1 Protein Homology CDS 53106 55088 . + 0 ID=cds-WP_000648762.1;Parent=gene-CCO57_RS07590;Dbxref=GenBank:WP_000648762.1;Name=WP_000648762.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=CCO57_RS07590;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000648762.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 55085 55984 . + . ID=gene-CCO57_RS07595;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=CCO57_RS07595;old_locus_tag=CCO57_07585 NZ_NPMC01000004.1 Protein Homology CDS 55085 55984 . + 0 ID=cds-WP_000169775.1;Parent=gene-CCO57_RS07595;Dbxref=GenBank:WP_000169775.1;Name=WP_000169775.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=CCO57_RS07595;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169775.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 55981 57627 . + . ID=gene-CCO57_RS07600;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=CCO57_RS07600;old_locus_tag=CCO57_07590 NZ_NPMC01000004.1 Protein Homology CDS 55981 57627 . + 0 ID=cds-WP_000978056.1;Parent=gene-CCO57_RS07600;Dbxref=GenBank:WP_000978056.1;Name=WP_000978056.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=CCO57_RS07600;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000978056.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 57624 57959 . + . ID=gene-CCO57_RS07605;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=CCO57_RS07605;old_locus_tag=CCO57_07595 NZ_NPMC01000004.1 Protein Homology CDS 57624 57959 . + 0 ID=cds-WP_000580688.1;Parent=gene-CCO57_RS07605;Dbxref=GenBank:WP_000580688.1;Name=WP_000580688.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=CCO57_RS07605;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580688.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 57959 58336 . + . ID=gene-CCO57_RS07610;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=CCO57_RS07610;old_locus_tag=CCO57_07600 NZ_NPMC01000004.1 Protein Homology CDS 57959 58336 . + 0 ID=cds-WP_000538694.1;Parent=gene-CCO57_RS07610;Dbxref=GenBank:WP_000538694.1;Name=WP_000538694.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=CCO57_RS07610;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538694.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 58331 58588 . - . ID=gene-CCO57_RS07615;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=CCO57_RS07615;old_locus_tag=CCO57_07605 NZ_NPMC01000004.1 Protein Homology CDS 58331 58588 . - 0 ID=cds-WP_000455132.1;Parent=gene-CCO57_RS07615;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=CCO57_RS07615;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 58686 60053 . - . ID=gene-CCO57_RS07620;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CCO57_RS07620;old_locus_tag=CCO57_07610 NZ_NPMC01000004.1 Protein Homology CDS 58686 60053 . - 0 ID=cds-WP_000144653.1;Parent=gene-CCO57_RS07620;Dbxref=GenBank:WP_000144653.1;Name=WP_000144653.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=CCO57_RS07620;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000144653.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 60050 61012 . - . ID=gene-CCO57_RS07625;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CCO57_RS07625;old_locus_tag=CCO57_07615 NZ_NPMC01000004.1 Protein Homology CDS 60050 61012 . - 0 ID=cds-WP_001255555.1;Parent=gene-CCO57_RS07625;Dbxref=GenBank:WP_001255555.1;Name=WP_001255555.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=CCO57_RS07625;product=o-succinylbenzoate synthase;protein_id=WP_001255555.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 61012 61869 . - . ID=gene-CCO57_RS07630;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CCO57_RS07630;old_locus_tag=CCO57_07620 NZ_NPMC01000004.1 Protein Homology CDS 61012 61869 . - 0 ID=cds-WP_000640013.1;Parent=gene-CCO57_RS07630;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=CCO57_RS07630;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 61884 62642 . - . ID=gene-CCO57_RS07635;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CCO57_RS07635;old_locus_tag=CCO57_07625 NZ_NPMC01000004.1 Protein Homology CDS 61884 62642 . - 0 ID=cds-WP_000979134.1;Parent=gene-CCO57_RS07635;Dbxref=GenBank:WP_000979134.1;Name=WP_000979134.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=CCO57_RS07635;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000979134.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 62639 64309 . - . ID=gene-CCO57_RS07640;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CCO57_RS07640;old_locus_tag=CCO57_07630 NZ_NPMC01000004.1 Protein Homology CDS 62639 64309 . - 0 ID=cds-WP_000116398.1;Parent=gene-CCO57_RS07640;Dbxref=GenBank:WP_000116398.1;Name=WP_000116398.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=CCO57_RS07640;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116398.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 64395 65690 . - . ID=gene-CCO57_RS07645;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=CCO57_RS07645;old_locus_tag=CCO57_07635 NZ_NPMC01000004.1 Protein Homology CDS 64395 65690 . - 0 ID=cds-WP_000555675.1;Parent=gene-CCO57_RS07645;Dbxref=GenBank:WP_000555675.1;Name=WP_000555675.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406427.1;locus_tag=CCO57_RS07645;product=isochorismate synthase MenF;protein_id=WP_000555675.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 65791 66096 . - . ID=gene-CCO57_RS07650;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=CCO57_RS07650;old_locus_tag=CCO57_07640 NZ_NPMC01000004.1 Protein Homology CDS 65791 66096 . - 0 ID=cds-WP_001522308.1;Parent=gene-CCO57_RS07650;Dbxref=GenBank:WP_001522308.1;Name=WP_001522308.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=CCO57_RS07650;product=stress response protein ElaB;protein_id=WP_001522308.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 66151 66612 . - . ID=gene-CCO57_RS07655;Name=CCO57_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07655;old_locus_tag=CCO57_07645 NZ_NPMC01000004.1 Protein Homology CDS 66151 66612 . - 0 ID=cds-WP_000568159.1;Parent=gene-CCO57_RS07655;Dbxref=GenBank:WP_000568159.1;Name=WP_000568159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=CCO57_RS07655;product=GNAT family N-acetyltransferase;protein_id=WP_000568159.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 66673 67590 . + . ID=gene-CCO57_RS07660;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=CCO57_RS07660;old_locus_tag=CCO57_07650 NZ_NPMC01000004.1 Protein Homology CDS 66673 67590 . + 0 ID=cds-WP_000419094.1;Parent=gene-CCO57_RS07660;Dbxref=GenBank:WP_000419094.1;Name=WP_000419094.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=CCO57_RS07660;product=ribonuclease BN;protein_id=WP_000419094.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 67656 68660 . + . ID=gene-CCO57_RS07665;Name=CCO57_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07665;old_locus_tag=CCO57_07655 NZ_NPMC01000004.1 Protein Homology CDS 67656 68660 . + 0 ID=cds-WP_000368564.1;Parent=gene-CCO57_RS07665;Dbxref=GenBank:WP_000368564.1;Name=WP_000368564.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131502.1;locus_tag=CCO57_RS07665;product=chemotaxis protein;protein_id=WP_000368564.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 68801 70258 . - . ID=gene-CCO57_RS07670;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=CCO57_RS07670;old_locus_tag=CCO57_07660 NZ_NPMC01000004.1 Protein Homology CDS 68801 70258 . - 0 ID=cds-WP_000156669.1;Parent=gene-CCO57_RS07670;Dbxref=GenBank:WP_000156669.1;Name=WP_000156669.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=CCO57_RS07670;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156669.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 70265 71794 . - . ID=gene-CCO57_RS07675;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=CCO57_RS07675;old_locus_tag=CCO57_07665 NZ_NPMC01000004.1 Protein Homology CDS 70265 71794 . - 0 ID=cds-WP_000926430.1;Parent=gene-CCO57_RS07675;Dbxref=GenBank:WP_000926430.1;Name=WP_000926430.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=CCO57_RS07675;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926430.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 71871 73712 . - . ID=gene-CCO57_RS07680;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=CCO57_RS07680;old_locus_tag=CCO57_07670 NZ_NPMC01000004.1 Protein Homology CDS 71871 73712 . - 0 ID=cds-WP_001056582.1;Parent=gene-CCO57_RS07680;Dbxref=GenBank:WP_001056582.1;Name=WP_001056582.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=CCO57_RS07680;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056582.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 73709 74011 . - . ID=gene-CCO57_RS07685;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=CCO57_RS07685;old_locus_tag=CCO57_07675 NZ_NPMC01000004.1 Protein Homology CDS 73709 74011 . - 0 ID=cds-WP_000612687.1;Parent=gene-CCO57_RS07685;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=CCO57_RS07685;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 74008 74562 . - . ID=gene-CCO57_RS07690;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=CCO57_RS07690;old_locus_tag=CCO57_07680 NZ_NPMC01000004.1 Protein Homology CDS 74008 74562 . - 0 ID=cds-WP_000393522.1;Parent=gene-CCO57_RS07690;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=CCO57_RS07690;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 74573 75115 . - . ID=gene-CCO57_RS07695;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=CCO57_RS07695;old_locus_tag=CCO57_07685 NZ_NPMC01000004.1 Protein Homology CDS 74573 75115 . - 0 ID=cds-WP_000172747.1;Parent=gene-CCO57_RS07695;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=CCO57_RS07695;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 75130 76107 . - . ID=gene-CCO57_RS07700;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=CCO57_RS07700;old_locus_tag=CCO57_07690 NZ_NPMC01000004.1 Protein Homology CDS 75130 76107 . - 0 ID=cds-WP_000118515.1;Parent=gene-CCO57_RS07700;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=CCO57_RS07700;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 76104 78830 . - . ID=gene-CCO57_RS07705;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=CCO57_RS07705;old_locus_tag=CCO57_07695 NZ_NPMC01000004.1 Protein Homology CDS 76104 78830 . - 0 ID=cds-WP_024134279.1;Parent=gene-CCO57_RS07705;Dbxref=GenBank:WP_024134279.1;Name=WP_024134279.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=CCO57_RS07705;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_024134279.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 78861 80198 . - . ID=gene-CCO57_RS07710;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=CCO57_RS07710;old_locus_tag=CCO57_07700 NZ_NPMC01000004.1 Protein Homology CDS 78861 80198 . - 0 ID=cds-WP_000800048.1;Parent=gene-CCO57_RS07710;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=CCO57_RS07710;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 80195 80695 . - . ID=gene-CCO57_RS07715;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=CCO57_RS07715;old_locus_tag=CCO57_07705 NZ_NPMC01000004.1 Protein Homology CDS 80195 80695 . - 0 ID=cds-WP_000545038.1;Parent=gene-CCO57_RS07715;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=CCO57_RS07715;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 80698 82500 . - . ID=gene-CCO57_RS07720;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=CCO57_RS07720;old_locus_tag=CCO57_07710 NZ_NPMC01000004.1 Protein Homology CDS 80698 82500 . - 0 ID=cds-WP_000247855.1;Parent=gene-CCO57_RS07720;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=CCO57_RS07720;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 82587 83249 . - . ID=gene-CCO57_RS07725;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=CCO57_RS07725;old_locus_tag=CCO57_07715 NZ_NPMC01000004.1 Protein Homology CDS 82587 83249 . - 0 ID=cds-WP_000386728.1;Parent=gene-CCO57_RS07725;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=CCO57_RS07725;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 83265 83708 . - . ID=gene-CCO57_RS07730;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=CCO57_RS07730;old_locus_tag=CCO57_07720 NZ_NPMC01000004.1 Protein Homology CDS 83265 83708 . - 0 ID=cds-WP_000062993.1;Parent=gene-CCO57_RS07730;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=CCO57_RS07730;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 84103 84255 . - . ID=gene-CCO57_RS07735;Name=CCO57_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07735;old_locus_tag=CCO57_07725 NZ_NPMC01000004.1 Protein Homology CDS 84103 84255 . - 0 ID=cds-WP_001121022.1;Parent=gene-CCO57_RS07735;Dbxref=GenBank:WP_001121022.1;Name=WP_001121022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=CCO57_RS07735;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001121022.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 84335 85273 . - . ID=gene-CCO57_RS07740;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=CCO57_RS07740;old_locus_tag=CCO57_07730 NZ_NPMC01000004.1 Protein Homology CDS 84335 85273 . - 0 ID=cds-WP_000606292.1;Parent=gene-CCO57_RS07740;Dbxref=GenBank:WP_000606292.1;Name=WP_000606292.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=CCO57_RS07740;product=transcriptional regulator LrhA;protein_id=WP_000606292.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 86205 87419 . + . ID=gene-CCO57_RS07750;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=CCO57_RS07750;old_locus_tag=CCO57_07740 NZ_NPMC01000004.1 Protein Homology CDS 86205 87419 . + 0 ID=cds-WP_000074540.1;Parent=gene-CCO57_RS07750;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=CCO57_RS07750;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 87513 88112 . + . ID=gene-CCO57_RS07755;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=CCO57_RS07755;old_locus_tag=CCO57_07745 NZ_NPMC01000004.1 Protein Homology CDS 87513 88112 . + 0 ID=cds-WP_000813882.1;Parent=gene-CCO57_RS07755;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=CCO57_RS07755;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 88218 90044 . - . ID=gene-CCO57_RS07760;Name=CCO57_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07760;old_locus_tag=CCO57_07750 NZ_NPMC01000004.1 Protein Homology CDS 88218 90044 . - 0 ID=cds-WP_001012861.1;Parent=gene-CCO57_RS07760;Dbxref=GenBank:WP_001012861.1;Name=WP_001012861.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=CCO57_RS07760;product=SLC13 family permease;protein_id=WP_001012861.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 90121 90798 . - . ID=gene-CCO57_RS07765;Name=CCO57_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07765;old_locus_tag=CCO57_07755 NZ_NPMC01000004.1 Protein Homology CDS 90121 90798 . - 0 ID=cds-WP_001555201.1;Parent=gene-CCO57_RS07765;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=CCO57_RS07765;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 90791 91285 . - . ID=gene-CCO57_RS07770;Name=CCO57_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07770;old_locus_tag=CCO57_07760 NZ_NPMC01000004.1 Protein Homology CDS 90791 91285 . - 0 ID=cds-WP_000426135.1;Parent=gene-CCO57_RS07770;Dbxref=GenBank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=CCO57_RS07770;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 91368 91823 . - . ID=gene-CCO57_RS07775;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=CCO57_RS07775;old_locus_tag=CCO57_07765 NZ_NPMC01000004.1 Protein Homology CDS 91368 91823 . - 0 ID=cds-WP_023214995.1;Parent=gene-CCO57_RS07775;Dbxref=GenBank:WP_023214995.1;Name=WP_023214995.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=CCO57_RS07775;product=terminus macrodomain insulation protein YfbV;protein_id=WP_023214995.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 92163 93365 . + . ID=gene-CCO57_RS07780;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=CCO57_RS07780;old_locus_tag=CCO57_07770 NZ_NPMC01000004.1 Protein Homology CDS 92163 93365 . + 0 ID=cds-WP_000095689.1;Parent=gene-CCO57_RS07780;Dbxref=GenBank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=CCO57_RS07780;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 93442 95586 . + . ID=gene-CCO57_RS07785;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO57_RS07785;old_locus_tag=CCO57_07775 NZ_NPMC01000004.1 Protein Homology CDS 93442 95586 . + 0 ID=cds-WP_000086690.1;Parent=gene-CCO57_RS07785;Dbxref=GenBank:WP_000086690.1;Name=WP_000086690.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=CCO57_RS07785;product=phosphate acetyltransferase;protein_id=WP_000086690.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 95804 97324 . + . ID=gene-CCO57_RS07790;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=CCO57_RS07790;old_locus_tag=CCO57_07780 NZ_NPMC01000004.1 Protein Homology CDS 95804 97324 . + 0 ID=cds-WP_001645368.1;Parent=gene-CCO57_RS07790;Dbxref=GenBank:WP_001645368.1;Name=WP_001645368.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=CCO57_RS07790;product=putative basic amino acid antiporter YfcC;protein_id=WP_001645368.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 97373 98326 . - . ID=gene-CCO57_RS07795;Name=CCO57_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07795;old_locus_tag=CCO57_07785 NZ_NPMC01000004.1 Protein Homology CDS 97373 98326 . - 0 ID=cds-WP_023136748.1;Parent=gene-CCO57_RS07795;Dbxref=GenBank:WP_023136748.1;Name=WP_023136748.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=CCO57_RS07795;product=transketolase family protein;protein_id=WP_023136748.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 98319 99149 . - . ID=gene-CCO57_RS07800;Name=CCO57_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07800;old_locus_tag=CCO57_07790 NZ_NPMC01000004.1 Protein Homology CDS 98319 99149 . - 0 ID=cds-WP_001103272.1;Parent=gene-CCO57_RS07800;Dbxref=GenBank:WP_001103272.1;Name=WP_001103272.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=CCO57_RS07800;product=transketolase;protein_id=WP_001103272.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 99146 100537 . - . ID=gene-CCO57_RS07805;Name=CCO57_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07805;old_locus_tag=CCO57_07795 NZ_NPMC01000004.1 Protein Homology CDS 99146 100537 . - 0 ID=cds-WP_001542443.1;Parent=gene-CCO57_RS07805;Dbxref=GenBank:WP_001542443.1;Name=WP_001542443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=CCO57_RS07805;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001542443.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 100558 100830 . - . ID=gene-CCO57_RS07810;Name=CCO57_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07810;old_locus_tag=CCO57_07800 NZ_NPMC01000004.1 Protein Homology CDS 100558 100830 . - 0 ID=cds-WP_000699818.1;Parent=gene-CCO57_RS07810;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=CCO57_RS07810;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 100911 101354 . - . ID=gene-CCO57_RS07815;Name=CCO57_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07815;old_locus_tag=CCO57_07805 NZ_NPMC01000004.1 Protein Homology CDS 100911 101354 . - 0 ID=cds-WP_086776791.1;Parent=gene-CCO57_RS07815;Dbxref=GenBank:WP_086776791.1;Name=WP_086776791.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=CCO57_RS07815;product=PTS sugar transporter subunit IIA;protein_id=WP_086776791.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 101607 102626 . + . ID=gene-CCO57_RS07825;Name=CCO57_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07825;old_locus_tag=CCO57_07815 NZ_NPMC01000004.1 Protein Homology CDS 101607 102626 . + 0 ID=cds-WP_000026949.1;Parent=gene-CCO57_RS07825;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=CCO57_RS07825;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 102632 103186 . - . ID=gene-CCO57_RS07830;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=CCO57_RS07830;old_locus_tag=CCO57_07820 NZ_NPMC01000004.1 Protein Homology CDS 102632 103186 . - 0 ID=cds-WP_000230214.1;Parent=gene-CCO57_RS07830;Dbxref=GenBank:WP_000230214.1;Name=WP_000230214.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=CCO57_RS07830;product=NUDIX hydrolase YfcD;protein_id=WP_000230214.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 103243 103794 . - . ID=gene-CCO57_RS07835;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=CCO57_RS07835;old_locus_tag=CCO57_07825 NZ_NPMC01000004.1 Protein Homology CDS 103243 103794 . - 0 ID=cds-WP_000772458.1;Parent=gene-CCO57_RS07835;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=CCO57_RS07835;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 103850 104494 . - . ID=gene-CCO57_RS07840;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=CCO57_RS07840;old_locus_tag=CCO57_07830 NZ_NPMC01000004.1 Protein Homology CDS 103850 104494 . - 0 ID=cds-WP_000043010.1;Parent=gene-CCO57_RS07840;Dbxref=GenBank:WP_000043010.1;Name=WP_000043010.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=CCO57_RS07840;product=glutathione transferase;protein_id=WP_000043010.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 104637 105284 . + . ID=gene-CCO57_RS07845;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=CCO57_RS07845;old_locus_tag=CCO57_07835 NZ_NPMC01000004.1 Protein Homology CDS 104637 105284 . + 0 ID=cds-WP_000566563.1;Parent=gene-CCO57_RS07845;Dbxref=GenBank:WP_000566563.1;Name=WP_000566563.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=CCO57_RS07845;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566563.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 105410 106303 . + . ID=gene-CCO57_RS07850;Name=CCO57_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07850;old_locus_tag=CCO57_07840 NZ_NPMC01000004.1 Protein Homology CDS 105410 106303 . + 0 ID=cds-WP_001166272.1;Parent=gene-CCO57_RS07850;Dbxref=GenBank:WP_001166272.1;Name=WP_001166272.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=CCO57_RS07850;product=TIGR01777 family oxidoreductase;protein_id=WP_001166272.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 106355 107128 . - . ID=gene-CCO57_RS07855;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=CCO57_RS07855;old_locus_tag=CCO57_07845 NZ_NPMC01000004.1 Protein Homology CDS 106355 107128 . - 0 ID=cds-WP_001293591.1;Parent=gene-CCO57_RS07855;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=CCO57_RS07855;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 107142 107849 . - . ID=gene-CCO57_RS07860;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=CCO57_RS07860;old_locus_tag=CCO57_07850 NZ_NPMC01000004.1 Protein Homology CDS 107142 107849 . - 0 ID=cds-WP_000569771.1;Parent=gene-CCO57_RS07860;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=CCO57_RS07860;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 107846 108532 . - . ID=gene-CCO57_RS07865;Name=CCO57_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07865;old_locus_tag=CCO57_07855 NZ_NPMC01000004.1 Protein Homology CDS 107846 108532 . - 0 ID=cds-WP_000965498.1;Parent=gene-CCO57_RS07865;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=CCO57_RS07865;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 108715 109497 . - . ID=gene-CCO57_RS07870;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=CCO57_RS07870;old_locus_tag=CCO57_07860 NZ_NPMC01000004.1 Protein Homology CDS 108715 109497 . - 0 ID=cds-WP_000731868.1;Parent=gene-CCO57_RS07870;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=CCO57_RS07870;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 109735 110517 . - . ID=gene-CCO57_RS07875;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=CCO57_RS07875;old_locus_tag=CCO57_07865 NZ_NPMC01000004.1 Protein Homology CDS 109735 110517 . - 0 ID=cds-WP_000754423.1;Parent=gene-CCO57_RS07875;Dbxref=GenBank:WP_000754423.1;Name=WP_000754423.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=CCO57_RS07875;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754423.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 110806 111375 . - . ID=gene-CCO57_RS07885;Name=CCO57_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07885;old_locus_tag=CCO57_07875 NZ_NPMC01000004.1 Protein Homology CDS 110806 111375 . - 0 ID=cds-WP_023207564.1;Parent=gene-CCO57_RS07885;Dbxref=GenBank:WP_023207564.1;Name=WP_023207564.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=CCO57_RS07885;product=UbiX family flavin prenyltransferase;protein_id=WP_023207564.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 111402 112808 . - . ID=gene-CCO57_RS07890;Name=CCO57_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07890;old_locus_tag=CCO57_07880 NZ_NPMC01000004.1 Protein Homology CDS 111402 112808 . - 0 ID=cds-WP_023214272.1;Parent=gene-CCO57_RS07890;Dbxref=GenBank:WP_023214272.1;Name=WP_023214272.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=CCO57_RS07890;product=amino acid permease;protein_id=WP_023214272.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 112872 113975 . - . ID=gene-CCO57_RS07895;Name=CCO57_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07895;old_locus_tag=CCO57_07885 NZ_NPMC01000004.1 Protein Homology CDS 112872 113975 . - 0 ID=cds-WP_000281907.1;Parent=gene-CCO57_RS07895;Dbxref=GenBank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=CCO57_RS07895;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 113977 115398 . - . ID=gene-CCO57_RS07900;Name=CCO57_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07900;old_locus_tag=CCO57_07890 NZ_NPMC01000004.1 Protein Homology CDS 113977 115398 . - 0 ID=cds-WP_000072512.1;Parent=gene-CCO57_RS07900;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=CCO57_RS07900;product=APC family permease;protein_id=WP_000072512.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 115489 116886 . - . ID=gene-CCO57_RS07905;Name=CCO57_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07905;old_locus_tag=CCO57_07895 NZ_NPMC01000004.1 Protein Homology CDS 115489 116886 . - 0 ID=cds-WP_000132307.1;Parent=gene-CCO57_RS07905;Dbxref=GenBank:WP_000132307.1;Name=WP_000132307.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=CCO57_RS07905;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132307.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 117097 118524 . + . ID=gene-CCO57_RS07910;Name=CCO57_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07910;old_locus_tag=CCO57_07900 NZ_NPMC01000004.1 Protein Homology CDS 117097 118524 . + 0 ID=cds-WP_086776795.1;Parent=gene-CCO57_RS07910;Dbxref=GenBank:WP_086776795.1;Name=WP_086776795.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=CCO57_RS07910;product=sigma-54 interaction domain-containing protein;protein_id=WP_086776795.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 118560 120077 . - . ID=gene-CCO57_RS07915;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CCO57_RS07915;old_locus_tag=CCO57_07905 NZ_NPMC01000004.1 Protein Homology CDS 118560 120077 . - 0 ID=cds-WP_000334205.1;Parent=gene-CCO57_RS07915;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=CCO57_RS07915;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 120115 120603 . - . ID=gene-CCO57_RS07920;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=CCO57_RS07920;old_locus_tag=CCO57_07910 NZ_NPMC01000004.1 Protein Homology CDS 120115 120603 . - 0 ID=cds-WP_000262102.1;Parent=gene-CCO57_RS07920;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=CCO57_RS07920;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 120914 121588 . - . ID=gene-CCO57_RS07925;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=CCO57_RS07925;old_locus_tag=CCO57_07915 NZ_NPMC01000004.1 Protein Homology CDS 120914 121588 . - 0 ID=cds-WP_000157041.1;Parent=gene-CCO57_RS07925;Dbxref=GenBank:WP_000157041.1;Name=WP_000157041.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=CCO57_RS07925;product=cell division protein DedD;protein_id=WP_000157041.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 121578 122846 . - . ID=gene-CCO57_RS07930;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=CCO57_RS07930;old_locus_tag=CCO57_07920 NZ_NPMC01000004.1 Protein Homology CDS 121578 122846 . - 0 ID=cds-WP_058111709.1;Parent=gene-CCO57_RS07930;Dbxref=GenBank:WP_058111709.1;Name=WP_058111709.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=CCO57_RS07930;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_058111709.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 122914 123828 . - . ID=gene-CCO57_RS07935;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CCO57_RS07935;old_locus_tag=CCO57_07925 NZ_NPMC01000004.1 Protein Homology CDS 122914 123828 . - 0 ID=cds-WP_001630099.1;Parent=gene-CCO57_RS07935;Dbxref=GenBank:WP_001630099.1;Name=WP_001630099.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=CCO57_RS07935;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_001630099.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 123978 124637 . - . ID=gene-CCO57_RS07940;Name=CCO57_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07940;old_locus_tag=CCO57_07930 NZ_NPMC01000004.1 Protein Homology CDS 123978 124637 . - 0 ID=cds-WP_000364317.1;Parent=gene-CCO57_RS07940;Dbxref=GenBank:WP_000364317.1;Name=WP_000364317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=CCO57_RS07940;product=DedA family protein;protein_id=WP_000364317.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 124686 125498 . - . ID=gene-CCO57_RS07945;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CCO57_RS07945;old_locus_tag=CCO57_07935 NZ_NPMC01000004.1 Protein Homology CDS 124686 125498 . - 0 ID=cds-WP_000016628.1;Parent=gene-CCO57_RS07945;Dbxref=GenBank:WP_000016628.1;Name=WP_000016628.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=CCO57_RS07945;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016628.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 125498 126511 . - . ID=gene-CCO57_RS07950;Name=CCO57_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07950;old_locus_tag=CCO57_07940 NZ_NPMC01000004.1 Protein Homology CDS 125498 126511 . - 0 ID=cds-WP_001634998.1;Parent=gene-CCO57_RS07950;Dbxref=GenBank:WP_001634998.1;Name=WP_001634998.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=CCO57_RS07950;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001634998.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 126579 127715 . - . ID=gene-CCO57_RS07955;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=CCO57_RS07955;old_locus_tag=CCO57_07945 NZ_NPMC01000004.1 Protein Homology CDS 126579 127715 . - 0 ID=cds-WP_001630102.1;Parent=gene-CCO57_RS07955;Dbxref=GenBank:WP_001630102.1;Name=WP_001630102.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=CCO57_RS07955;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_001630102.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 127819 128820 . + . ID=gene-CCO57_RS07960;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=CCO57_RS07960;old_locus_tag=CCO57_07950 NZ_NPMC01000004.1 Protein Homology CDS 127819 128820 . + 0 ID=cds-WP_000553396.1;Parent=gene-CCO57_RS07960;Dbxref=GenBank:WP_000553396.1;Name=WP_000553396.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=CCO57_RS07960;product=flagella biosynthesis regulator Flk;protein_id=WP_000553396.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 128817 129995 . - . ID=gene-CCO57_RS07965;Name=CCO57_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07965;old_locus_tag=CCO57_07955 NZ_NPMC01000004.1 Protein Homology CDS 128817 129995 . - 0 ID=cds-WP_000127728.1;Parent=gene-CCO57_RS07965;Dbxref=GenBank:WP_000127728.1;Name=WP_000127728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=CCO57_RS07965;product=MFS transporter;protein_id=WP_000127728.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 130175 130549 . - . ID=gene-CCO57_RS07970;Name=CCO57_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07970;old_locus_tag=CCO57_07960 NZ_NPMC01000004.1 Protein Homology CDS 130175 130549 . - 0 ID=cds-WP_001051266.1;Parent=gene-CCO57_RS07970;Dbxref=GenBank:WP_001051266.1;Name=WP_001051266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=CCO57_RS07970;product=hypothetical protein;protein_id=WP_001051266.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 130722 130970 . + . ID=gene-CCO57_RS07975;Name=CCO57_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07975;old_locus_tag=CCO57_07965 NZ_NPMC01000004.1 Protein Homology CDS 130722 130970 . + 0 ID=cds-WP_000433429.1;Parent=gene-CCO57_RS07975;Dbxref=GenBank:WP_000433429.1;Name=WP_000433429.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=CCO57_RS07975;product=helix-turn-helix domain-containing protein;protein_id=WP_000433429.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 131139 131507 . + . ID=gene-CCO57_RS07980;Name=CCO57_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07980;old_locus_tag=CCO57_07970 NZ_NPMC01000004.1 Protein Homology CDS 131139 131507 . + 0 ID=cds-WP_000118256.1;Parent=gene-CCO57_RS07980;Dbxref=GenBank:WP_000118256.1;Name=WP_000118256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=CCO57_RS07980;product=NlpC/P60 family protein;protein_id=WP_000118256.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 131507 132025 . + . ID=gene-CCO57_RS07985;Name=CCO57_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07985;old_locus_tag=CCO57_07975 NZ_NPMC01000004.1 Protein Homology CDS 131507 132025 . + 0 ID=cds-WP_001635002.1;Parent=gene-CCO57_RS07985;Dbxref=GenBank:WP_001635002.1;Name=WP_001635002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=CCO57_RS07985;product=YbjP/YqhG family protein;protein_id=WP_001635002.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 132092 132748 . - . ID=gene-CCO57_RS07990;Name=CCO57_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS07990;old_locus_tag=CCO57_07980 NZ_NPMC01000004.1 Protein Homology CDS 132092 132748 . - 0 ID=cds-WP_001142909.1;Parent=gene-CCO57_RS07990;Dbxref=GenBank:WP_001142909.1;Name=WP_001142909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=CCO57_RS07990;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142909.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 132846 134060 . - . ID=gene-CCO57_RS07995;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=CCO57_RS07995;old_locus_tag=CCO57_07985 NZ_NPMC01000004.1 Protein Homology CDS 132846 134060 . - 0 ID=cds-WP_000817161.1;Parent=gene-CCO57_RS07995;Dbxref=GenBank:WP_000817161.1;Name=WP_000817161.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=CCO57_RS07995;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 134220 136220 . + . ID=gene-CCO57_RS08000;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=CCO57_RS08000;old_locus_tag=CCO57_07990 NZ_NPMC01000004.1 Protein Homology CDS 134220 136220 . + 0 ID=cds-WP_176453479.1;Parent=gene-CCO57_RS08000;Dbxref=GenBank:WP_176453479.1;Name=WP_176453479.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=CCO57_RS08000;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_176453479.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 136268 136543 . - . ID=gene-CCO57_RS08005;Name=CCO57_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08005;old_locus_tag=CCO57_07995 NZ_NPMC01000004.1 Protein Homology CDS 136268 136543 . - 0 ID=cds-WP_000559749.1;Parent=gene-CCO57_RS08005;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=CCO57_RS08005;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 136576 137124 . - . ID=gene-CCO57_RS08010;Name=CCO57_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08010;old_locus_tag=CCO57_08000 NZ_NPMC01000004.1 Protein Homology CDS 136576 137124 . - 0 ID=cds-WP_001089211.1;Parent=gene-CCO57_RS08010;Dbxref=GenBank:WP_001089211.1;Name=WP_001089211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=CCO57_RS08010;product=elongation factor P hydroxylase;protein_id=WP_001089211.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 137124 137933 . - . ID=gene-CCO57_RS08015;Name=CCO57_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08015;old_locus_tag=CCO57_08005 NZ_NPMC01000004.1 Protein Homology CDS 137124 137933 . - 0 ID=cds-WP_000368599.1;Parent=gene-CCO57_RS08015;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=CCO57_RS08015;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 137933 138757 . - . ID=gene-CCO57_RS08020;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=CCO57_RS08020;old_locus_tag=CCO57_08010 NZ_NPMC01000004.1 Protein Homology CDS 137933 138757 . - 0 ID=cds-WP_000750429.1;Parent=gene-CCO57_RS08020;Dbxref=GenBank:WP_000750429.1;Name=WP_000750429.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=CCO57_RS08020;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750429.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 138761 139846 . - . ID=gene-CCO57_RS08025;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CCO57_RS08025;old_locus_tag=CCO57_08015 NZ_NPMC01000004.1 Protein Homology CDS 138761 139846 . - 0 ID=cds-WP_000918475.1;Parent=gene-CCO57_RS08025;Dbxref=GenBank:WP_000918475.1;Name=WP_000918475.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=CCO57_RS08025;product=chorismate synthase;protein_id=WP_000918475.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 139882 140814 . - . ID=gene-CCO57_RS08030;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=CCO57_RS08030;old_locus_tag=CCO57_08020 NZ_NPMC01000004.1 Protein Homology CDS 139882 140814 . - 0 ID=cds-WP_001542329.1;Parent=gene-CCO57_RS08030;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=CCO57_RS08030;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 140980 141531 . + . ID=gene-CCO57_RS08035;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=CCO57_RS08035;old_locus_tag=CCO57_08025 NZ_NPMC01000004.1 Protein Homology CDS 140980 141531 . + 0 ID=cds-WP_000730794.1;Parent=gene-CCO57_RS08035;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=CCO57_RS08035;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 141631 142116 . - . ID=gene-CCO57_RS08040;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=CCO57_RS08040;old_locus_tag=CCO57_08030 NZ_NPMC01000004.1 Protein Homology CDS 141631 142116 . - 0 ID=cds-WP_001195801.1;Parent=gene-CCO57_RS08040;Dbxref=GenBank:WP_001195801.1;Name=WP_001195801.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=CCO57_RS08040;product=phosphohistidine phosphatase SixA;protein_id=WP_001195801.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 142325 144472 . - . ID=gene-CCO57_RS08045;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=CCO57_RS08045;old_locus_tag=CCO57_08035 NZ_NPMC01000004.1 Protein Homology CDS 142325 144472 . - 0 ID=cds-WP_023136741.1;Parent=gene-CCO57_RS08045;Dbxref=GenBank:WP_023136741.1;Name=WP_023136741.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=CCO57_RS08045;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_023136741.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 144472 145782 . - . ID=gene-CCO57_RS08050;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=CCO57_RS08050;old_locus_tag=CCO57_08040 NZ_NPMC01000004.1 Protein Homology CDS 144472 145782 . - 0 ID=cds-WP_023136740.1;Parent=gene-CCO57_RS08050;Dbxref=GenBank:WP_023136740.1;Name=WP_023136740.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=CCO57_RS08050;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_023136740.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 145960 146244 . - . ID=gene-CCO57_RS08055;Name=CCO57_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08055;old_locus_tag=CCO57_08045 NZ_NPMC01000004.1 Protein Homology CDS 145960 146244 . - 0 ID=cds-WP_000030904.1;Parent=gene-CCO57_RS08055;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=CCO57_RS08055;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 146615 147922 . + . ID=gene-CCO57_RS08060;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=CCO57_RS08060;old_locus_tag=CCO57_08050 NZ_NPMC01000004.1 Protein Homology CDS 146615 147922 . + 0 ID=cds-WP_023231219.1;Parent=gene-CCO57_RS08060;Dbxref=GenBank:WP_023231219.1;Name=WP_023231219.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=CCO57_RS08060;product=long-chain fatty acid transporter FadL;protein_id=WP_023231219.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 147983 148738 . - . ID=gene-CCO57_RS08065;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=CCO57_RS08065;old_locus_tag=CCO57_08055 NZ_NPMC01000004.1 Protein Homology CDS 147983 148738 . - 0 ID=cds-WP_000776789.1;Parent=gene-CCO57_RS08065;Dbxref=GenBank:WP_000776789.1;Name=WP_000776789.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=CCO57_RS08065;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776789.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 149027 149968 . + . ID=gene-CCO57_RS08070;Name=CCO57_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08070;old_locus_tag=CCO57_08060 NZ_NPMC01000004.1 Protein Homology CDS 149027 149968 . + 0 ID=cds-WP_000377772.1;Parent=gene-CCO57_RS08070;Dbxref=GenBank:WP_000377772.1;Name=WP_000377772.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=CCO57_RS08070;product=formate/nitrite transporter family protein;protein_id=WP_000377772.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 150044 150118 . + . ID=gene-CCO57_RS08075;Name=CCO57_RS08075;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS08075;old_locus_tag=CCO57_08065 NZ_NPMC01000004.1 tRNAscan-SE tRNA 150044 150118 . + . ID=rna-CCO57_RS08075;Parent=gene-CCO57_RS08075;anticodon=(pos:150077..150079);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08075;product=tRNA-Arg NZ_NPMC01000004.1 tRNAscan-SE exon 150044 150118 . + . ID=exon-CCO57_RS08075-1;Parent=rna-CCO57_RS08075;anticodon=(pos:150077..150079);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08075;product=tRNA-Arg NZ_NPMC01000004.1 RefSeq gene 150275 151213 . - . ID=gene-CCO57_RS08080;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=CCO57_RS08080;old_locus_tag=CCO57_08070 NZ_NPMC01000004.1 Protein Homology CDS 150275 151213 . - 0 ID=cds-WP_000716005.1;Parent=gene-CCO57_RS08080;Dbxref=GenBank:WP_000716005.1;Name=WP_000716005.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=CCO57_RS08080;product=omptin family outer membrane protease PgtE;protein_id=WP_000716005.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 151481 152728 . - . ID=gene-CCO57_RS08085;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=CCO57_RS08085;old_locus_tag=CCO57_08075 NZ_NPMC01000004.1 Protein Homology CDS 151481 152728 . - 0 ID=cds-WP_000930843.1;Parent=gene-CCO57_RS08085;Dbxref=GenBank:WP_000930843.1;Name=WP_000930843.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=CCO57_RS08085;product=two-component system response regulator PgtA;protein_id=WP_000930843.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 152718 154724 . - . ID=gene-CCO57_RS08090;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=CCO57_RS08090;old_locus_tag=CCO57_08080 NZ_NPMC01000004.1 Protein Homology CDS 152718 154724 . - 0 ID=cds-WP_024798135.1;Parent=gene-CCO57_RS08090;Dbxref=GenBank:WP_024798135.1;Name=WP_024798135.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=CCO57_RS08090;product=two-component system sensor histidine kinase PgtB;protein_id=WP_024798135.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 154721 155914 . - . ID=gene-CCO57_RS08095;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=CCO57_RS08095;old_locus_tag=CCO57_08085 NZ_NPMC01000004.1 Protein Homology CDS 154721 155914 . - 0 ID=cds-WP_086776919.1;Parent=gene-CCO57_RS08095;Dbxref=GenBank:WP_086776919.1;Name=WP_086776919.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=CCO57_RS08095;product=phosphoglycerate transport regulator PgtC;protein_id=WP_086776919.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 156350 157741 . + . ID=gene-CCO57_RS08105;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=CCO57_RS08105;old_locus_tag=CCO57_08095 NZ_NPMC01000004.1 Protein Homology CDS 156350 157741 . + 0 ID=cds-WP_001528340.1;Parent=gene-CCO57_RS08105;Dbxref=GenBank:WP_001528340.1;Name=WP_001528340.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=CCO57_RS08105;product=phosphoglycerate transporter PgtP;protein_id=WP_001528340.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 158017 158259 . - . ID=gene-CCO57_RS08115;Name=CCO57_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08115;old_locus_tag=CCO57_08105 NZ_NPMC01000004.1 Protein Homology CDS 158017 158259 . - 0 ID=cds-WP_000639886.1;Parent=gene-CCO57_RS08115;Dbxref=GenBank:WP_000639886.1;Name=WP_000639886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=CCO57_RS08115;product=YfdY family protein;protein_id=WP_000639886.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 158781 159701 . + . ID=gene-CCO57_RS08120;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=CCO57_RS08120;old_locus_tag=CCO57_08110 NZ_NPMC01000004.1 Protein Homology CDS 158781 159701 . + 0 ID=cds-WP_000484431.1;Parent=gene-CCO57_RS08120;Dbxref=GenBank:WP_000484431.1;Name=WP_000484431.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=CCO57_RS08120;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484431.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 160104 160175 . + . ID=gene-CCO57_RS08125;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=CCO57_RS08125;old_locus_tag=CCO57_08115 NZ_NPMC01000004.1 Protein Homology CDS 160104 160175 . + 0 ID=cds-WP_010723117.1;Parent=gene-CCO57_RS08125;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=CCO57_RS08125;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 160225 161463 . - . ID=gene-CCO57_RS08130;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=CCO57_RS08130;old_locus_tag=CCO57_08120 NZ_NPMC01000004.1 Protein Homology CDS 160225 161463 . - 0 ID=cds-WP_000763118.1;Parent=gene-CCO57_RS08130;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=CCO57_RS08130;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 162186 163151 . - . ID=gene-CCO57_RS08135;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=CCO57_RS08135;old_locus_tag=CCO57_08125 NZ_NPMC01000004.1 Protein Homology CDS 162186 163151 . - 0 ID=cds-WP_000170380.1;Parent=gene-CCO57_RS08135;Dbxref=GenBank:WP_000170380.1;Name=WP_000170380.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=CCO57_RS08135;product=glucokinase;protein_id=WP_000170380.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 163355 164590 . + . ID=gene-CCO57_RS08140;Name=CCO57_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08140;old_locus_tag=CCO57_08130 NZ_NPMC01000004.1 Protein Homology CDS 163355 164590 . + 0 ID=cds-WP_000468928.1;Parent=gene-CCO57_RS08140;Dbxref=GenBank:WP_000468928.1;Name=WP_000468928.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=CCO57_RS08140;product=ion channel protein;protein_id=WP_000468928.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 164610 166262 . - . ID=gene-CCO57_RS08145;Name=CCO57_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08145;old_locus_tag=CCO57_08135 NZ_NPMC01000004.1 Protein Homology CDS 164610 166262 . - 0 ID=cds-WP_094914887.1;Parent=gene-CCO57_RS08145;Dbxref=GenBank:WP_094914887.1;Name=WP_094914887.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=CCO57_RS08145;product=alpha-keto acid decarboxylase family protein;protein_id=WP_094914887.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 166442 167440 . + . ID=gene-CCO57_RS08150;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CCO57_RS08150;old_locus_tag=CCO57_08140 NZ_NPMC01000004.1 Protein Homology CDS 166442 167440 . + 0 ID=cds-WP_000640285.1;Parent=gene-CCO57_RS08150;Dbxref=GenBank:WP_000640285.1;Name=WP_000640285.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=CCO57_RS08150;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000640285.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 167554 167880 . + . ID=gene-CCO57_RS08155;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=CCO57_RS08155;old_locus_tag=CCO57_08145 NZ_NPMC01000004.1 Protein Homology CDS 167554 167880 . + 0 ID=cds-WP_000490091.1;Parent=gene-CCO57_RS08155;Dbxref=GenBank:WP_000490091.1;Name=WP_000490091.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=CCO57_RS08155;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490091.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 167941 169182 . - . ID=gene-CCO57_RS08160;Name=CCO57_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08160;old_locus_tag=CCO57_08150 NZ_NPMC01000004.1 Protein Homology CDS 167941 169182 . - 0 ID=cds-WP_000131734.1;Parent=gene-CCO57_RS08160;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=CCO57_RS08160;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 169175 169252 . - . ID=gene-CCO57_RS24925;Name=CCO57_RS24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24925 NZ_NPMC01000004.1 Protein Homology CDS 169175 169252 . - 0 ID=cds-WP_419146551.1;Parent=gene-CCO57_RS24925;Dbxref=GenBank:WP_419146551.1;Name=WP_419146551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=CCO57_RS24925;product=hypothetical protein;protein_id=WP_419146551.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 169525 170727 . + . ID=gene-CCO57_RS08165;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=CCO57_RS08165;old_locus_tag=CCO57_08155 NZ_NPMC01000004.1 Protein Homology CDS 169525 170727 . + 0 ID=cds-WP_000376342.1;Parent=gene-CCO57_RS08165;Dbxref=GenBank:WP_000376342.1;Name=WP_000376342.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=CCO57_RS08165;product=nucleoside permease NupC;protein_id=WP_000376342.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 170781 172970 . - . ID=gene-CCO57_RS08170;Name=CCO57_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08170;old_locus_tag=CCO57_08160 NZ_NPMC01000004.1 Protein Homology CDS 170781 172970 . - 0 ID=cds-WP_023215010.1;Parent=gene-CCO57_RS08170;Dbxref=GenBank:WP_023215010.1;Name=WP_023215010.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=CCO57_RS08170;product=EAL domain-containing protein;protein_id=WP_023215010.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 173160 173235 . - . ID=gene-CCO57_RS08175;Name=CCO57_RS08175;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS08175;old_locus_tag=CCO57_08165 NZ_NPMC01000004.1 tRNAscan-SE tRNA 173160 173235 . - . ID=rna-CCO57_RS08175;Parent=gene-CCO57_RS08175;anticodon=(pos:complement(173200..173202));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08175;product=tRNA-Ala NZ_NPMC01000004.1 tRNAscan-SE exon 173160 173235 . - . ID=exon-CCO57_RS08175-1;Parent=rna-CCO57_RS08175;anticodon=(pos:complement(173200..173202));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08175;product=tRNA-Ala NZ_NPMC01000004.1 RefSeq gene 173278 173353 . - . ID=gene-CCO57_RS08180;Name=CCO57_RS08180;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS08180;old_locus_tag=CCO57_08170 NZ_NPMC01000004.1 tRNAscan-SE tRNA 173278 173353 . - . ID=rna-CCO57_RS08180;Parent=gene-CCO57_RS08180;anticodon=(pos:complement(173318..173320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08180;product=tRNA-Ala NZ_NPMC01000004.1 tRNAscan-SE exon 173278 173353 . - . ID=exon-CCO57_RS08180-1;Parent=rna-CCO57_RS08180;anticodon=(pos:complement(173318..173320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08180;product=tRNA-Ala NZ_NPMC01000004.1 RefSeq gene 173575 173937 . + . ID=gene-CCO57_RS08190;Name=CCO57_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08190;old_locus_tag=CCO57_08180 NZ_NPMC01000004.1 Protein Homology CDS 173575 173937 . + 0 ID=cds-WP_000472034.1;Parent=gene-CCO57_RS08190;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=CCO57_RS08190;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 173939 174331 . + . ID=gene-CCO57_RS08195;Name=CCO57_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08195;old_locus_tag=CCO57_08185 NZ_NPMC01000004.1 Protein Homology CDS 173939 174331 . + 0 ID=cds-WP_000826515.1;Parent=gene-CCO57_RS08195;Dbxref=GenBank:WP_000826515.1;Name=WP_000826515.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=CCO57_RS08195;product=MerR family transcriptional regulator;protein_id=WP_000826515.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 174385 175800 . - . ID=gene-CCO57_RS08200;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CCO57_RS08200;old_locus_tag=CCO57_08190 NZ_NPMC01000004.1 Protein Homology CDS 174385 175800 . - 0 ID=cds-WP_000695623.1;Parent=gene-CCO57_RS08200;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=CCO57_RS08200;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 176059 176134 . + . ID=gene-CCO57_RS08205;Name=CCO57_RS08205;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS08205;old_locus_tag=CCO57_08195 NZ_NPMC01000004.1 tRNAscan-SE tRNA 176059 176134 . + . ID=rna-CCO57_RS08205;Parent=gene-CCO57_RS08205;anticodon=(pos:176092..176094);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08205;product=tRNA-Val NZ_NPMC01000004.1 tRNAscan-SE exon 176059 176134 . + . ID=exon-CCO57_RS08205-1;Parent=rna-CCO57_RS08205;anticodon=(pos:176092..176094);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08205;product=tRNA-Val NZ_NPMC01000004.1 RefSeq gene 176180 176255 . + . ID=gene-CCO57_RS08210;Name=CCO57_RS08210;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS08210;old_locus_tag=CCO57_08200 NZ_NPMC01000004.1 tRNAscan-SE tRNA 176180 176255 . + . ID=rna-CCO57_RS08210;Parent=gene-CCO57_RS08210;anticodon=(pos:176213..176215);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08210;product=tRNA-Val NZ_NPMC01000004.1 tRNAscan-SE exon 176180 176255 . + . ID=exon-CCO57_RS08210-1;Parent=rna-CCO57_RS08210;anticodon=(pos:176213..176215);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08210;product=tRNA-Val NZ_NPMC01000004.1 RefSeq gene 176297 176372 . + . ID=gene-CCO57_RS08215;Name=CCO57_RS08215;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS08215;old_locus_tag=CCO57_08205 NZ_NPMC01000004.1 tRNAscan-SE tRNA 176297 176372 . + . ID=rna-CCO57_RS08215;Parent=gene-CCO57_RS08215;anticodon=(pos:176330..176332);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08215;product=tRNA-Val NZ_NPMC01000004.1 tRNAscan-SE exon 176297 176372 . + . ID=exon-CCO57_RS08215-1;Parent=rna-CCO57_RS08215;anticodon=(pos:176330..176332);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08215;product=tRNA-Val NZ_NPMC01000004.1 RefSeq gene 176377 176452 . + . ID=gene-CCO57_RS08220;Name=CCO57_RS08220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS08220;old_locus_tag=CCO57_08210 NZ_NPMC01000004.1 tRNAscan-SE tRNA 176377 176452 . + . ID=rna-CCO57_RS08220;Parent=gene-CCO57_RS08220;anticodon=(pos:176410..176412);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08220;product=tRNA-Lys NZ_NPMC01000004.1 tRNAscan-SE exon 176377 176452 . + . ID=exon-CCO57_RS08220-1;Parent=rna-CCO57_RS08220;anticodon=(pos:176410..176412);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS08220;product=tRNA-Lys NZ_NPMC01000004.1 RefSeq gene 176667 177551 . - . ID=gene-CCO57_RS08225;Name=CCO57_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08225;old_locus_tag=CCO57_08215 NZ_NPMC01000004.1 Protein Homology CDS 176667 177551 . - 0 ID=cds-WP_000438884.1;Parent=gene-CCO57_RS08225;Dbxref=GenBank:WP_000438884.1;Name=WP_000438884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=CCO57_RS08225;product=LysR family transcriptional regulator;protein_id=WP_000438884.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 177603 177761 . - . ID=gene-CCO57_RS08230;Name=CCO57_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08230;old_locus_tag=CCO57_08220 NZ_NPMC01000004.1 Protein Homology CDS 177603 177761 . - 0 ID=cds-WP_000658727.1;Parent=gene-CCO57_RS08230;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=CCO57_RS08230;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 177820 179076 . - . ID=gene-CCO57_RS08235;Name=CCO57_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08235;old_locus_tag=CCO57_08225 NZ_NPMC01000004.1 Protein Homology CDS 177820 179076 . - 0 ID=cds-WP_000513241.1;Parent=gene-CCO57_RS08235;Dbxref=GenBank:WP_000513241.1;Name=WP_000513241.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=CCO57_RS08235;product=nucleoside permease;protein_id=WP_000513241.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 179131 179964 . - . ID=gene-CCO57_RS08240;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=CCO57_RS08240;old_locus_tag=CCO57_08230 NZ_NPMC01000004.1 Protein Homology CDS 179131 179964 . - 0 ID=cds-WP_001119756.1;Parent=gene-CCO57_RS08240;Dbxref=GenBank:WP_001119756.1;Name=WP_001119756.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=CCO57_RS08240;product=xanthosine phosphorylase;protein_id=WP_001119756.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 180220 180981 . + . ID=gene-CCO57_RS08245;Name=CCO57_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08245;old_locus_tag=CCO57_08235 NZ_NPMC01000004.1 Protein Homology CDS 180220 180981 . + 0 ID=cds-WP_000722938.1;Parent=gene-CCO57_RS08245;Dbxref=GenBank:WP_000722938.1;Name=WP_000722938.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=CCO57_RS08245;product=outer membrane protein OmpK;protein_id=WP_000722938.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 181043 181969 . - . ID=gene-CCO57_RS08250;Name=CCO57_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08250;old_locus_tag=CCO57_08240 NZ_NPMC01000004.1 Protein Homology CDS 181043 181969 . - 0 ID=cds-WP_001109824.1;Parent=gene-CCO57_RS08250;Dbxref=GenBank:WP_001109824.1;Name=WP_001109824.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=CCO57_RS08250;product=LysR family transcriptional regulator;protein_id=WP_001109824.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 182059 183057 . + . ID=gene-CCO57_RS08255;Name=CCO57_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08255;old_locus_tag=CCO57_08245 NZ_NPMC01000004.1 Protein Homology CDS 182059 183057 . + 0 ID=cds-WP_000765569.1;Parent=gene-CCO57_RS08255;Dbxref=GenBank:WP_000765569.1;Name=WP_000765569.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=CCO57_RS08255;product=bile acid:sodium symporter family protein;protein_id=WP_000765569.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 183054 183272 . - . ID=gene-CCO57_RS08260;Name=CCO57_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08260;old_locus_tag=CCO57_08250 NZ_NPMC01000004.1 Protein Homology CDS 183054 183272 . - 0 ID=cds-WP_001519708.1;Parent=gene-CCO57_RS08260;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=CCO57_RS08260;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 183274 185289 . - . ID=gene-CCO57_RS08265;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CCO57_RS08265;old_locus_tag=CCO57_08255 NZ_NPMC01000004.1 Protein Homology CDS 183274 185289 . - 0 ID=cds-WP_000433291.1;Parent=gene-CCO57_RS08265;Dbxref=GenBank:WP_000433291.1;Name=WP_000433291.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=CCO57_RS08265;product=NAD-dependent DNA ligase LigA;protein_id=WP_000433291.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 185361 186347 . - . ID=gene-CCO57_RS08270;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=CCO57_RS08270;old_locus_tag=CCO57_08260 NZ_NPMC01000004.1 Protein Homology CDS 185361 186347 . - 0 ID=cds-WP_000983115.1;Parent=gene-CCO57_RS08270;Dbxref=GenBank:WP_000983115.1;Name=WP_000983115.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=CCO57_RS08270;product=cell division protein ZipA;protein_id=WP_000983115.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 186579 187340 . + . ID=gene-CCO57_RS08275;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=CCO57_RS08275;old_locus_tag=CCO57_08265 NZ_NPMC01000004.1 Protein Homology CDS 186579 187340 . + 0 ID=cds-WP_000255004.1;Parent=gene-CCO57_RS08275;Dbxref=GenBank:WP_000255004.1;Name=WP_000255004.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=CCO57_RS08275;product=sulfate transporter CysZ;protein_id=WP_000255004.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 187504 188475 . + . ID=gene-CCO57_RS08280;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CCO57_RS08280;old_locus_tag=CCO57_08270 NZ_NPMC01000004.1 Protein Homology CDS 187504 188475 . + 0 ID=cds-WP_000036904.1;Parent=gene-CCO57_RS08280;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=CCO57_RS08280;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 188859 189116 . + . ID=gene-CCO57_RS08285;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=CCO57_RS08285;old_locus_tag=CCO57_08275 NZ_NPMC01000004.1 Protein Homology CDS 188859 189116 . + 0 ID=cds-WP_000487600.1;Parent=gene-CCO57_RS08285;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=CCO57_RS08285;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 189165 190892 . + . ID=gene-CCO57_RS08290;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=CCO57_RS08290;old_locus_tag=CCO57_08280 NZ_NPMC01000004.1 Protein Homology CDS 189165 190892 . + 0 ID=cds-WP_000623118.1;Parent=gene-CCO57_RS08290;Dbxref=GenBank:WP_000623118.1;Name=WP_000623118.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=CCO57_RS08290;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623118.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 190933 191442 . + . ID=gene-CCO57_RS08295;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=CCO57_RS08295;old_locus_tag=CCO57_08285 NZ_NPMC01000004.1 Protein Homology CDS 190933 191442 . + 0 ID=cds-WP_000522253.1;Parent=gene-CCO57_RS08295;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=CCO57_RS08295;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 191606 191845 . - . ID=gene-CCO57_RS08300;Name=CCO57_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08300;old_locus_tag=CCO57_08290 NZ_NPMC01000004.1 Protein Homology CDS 191606 191845 . - 0 ID=cds-WP_000844541.1;Parent=gene-CCO57_RS08300;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=CCO57_RS08300;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 191842 192708 . - . ID=gene-CCO57_RS08305;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=CCO57_RS08305;old_locus_tag=CCO57_08295 NZ_NPMC01000004.1 Protein Homology CDS 191842 192708 . - 0 ID=cds-WP_023214282.1;Parent=gene-CCO57_RS08305;Dbxref=GenBank:WP_023214282.1;Name=WP_023214282.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=CCO57_RS08305;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_023214282.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 192791 194083 . + . ID=gene-CCO57_RS08310;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=CCO57_RS08310;old_locus_tag=CCO57_08300 NZ_NPMC01000004.1 Protein Homology CDS 192791 194083 . + 0 ID=cds-WP_094914888.1;Parent=gene-CCO57_RS08310;Dbxref=GenBank:WP_094914888.1;Name=WP_094914888.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=CCO57_RS08310;product=transcriptional regulator PtsJ;protein_id=WP_094914888.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 194098 194817 . + . ID=gene-CCO57_RS08315;Name=CCO57_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08315;old_locus_tag=CCO57_08305 NZ_NPMC01000004.1 Protein Homology CDS 194098 194817 . + 0 ID=cds-WP_001263752.1;Parent=gene-CCO57_RS08315;Dbxref=GenBank:WP_001263752.1;Name=WP_001263752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=CCO57_RS08315;product=GMP synthase;protein_id=WP_001263752.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 194876 195253 . + . ID=gene-CCO57_RS08320;Name=CCO57_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08320;old_locus_tag=CCO57_08310 NZ_NPMC01000004.1 Protein Homology CDS 194876 195253 . + 0 ID=cds-WP_001528527.1;Parent=gene-CCO57_RS08320;Dbxref=GenBank:WP_001528527.1;Name=WP_001528527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710726.1;locus_tag=CCO57_RS08320;product=YfeK family protein;protein_id=WP_001528527.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 195286 196197 . - . ID=gene-CCO57_RS08325;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=CCO57_RS08325;old_locus_tag=CCO57_08315 NZ_NPMC01000004.1 Protein Homology CDS 195286 196197 . - 0 ID=cds-WP_001093874.1;Parent=gene-CCO57_RS08325;Dbxref=GenBank:WP_001093874.1;Name=WP_001093874.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=CCO57_RS08325;product=cysteine synthase CysM;protein_id=WP_001093874.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 196318 197412 . - . ID=gene-CCO57_RS08330;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=CCO57_RS08330;old_locus_tag=CCO57_08320 NZ_NPMC01000004.1 Protein Homology CDS 196318 197412 . - 0 ID=cds-WP_000021072.1;Parent=gene-CCO57_RS08330;Dbxref=GenBank:WP_000021072.1;Name=WP_000021072.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=CCO57_RS08330;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021072.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 197402 198277 . - . ID=gene-CCO57_RS08335;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=CCO57_RS08335;old_locus_tag=CCO57_08325 NZ_NPMC01000004.1 Protein Homology CDS 197402 198277 . - 0 ID=cds-WP_000141289.1;Parent=gene-CCO57_RS08335;Dbxref=GenBank:WP_000141289.1;Name=WP_000141289.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=CCO57_RS08335;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000141289.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 198277 199110 . - . ID=gene-CCO57_RS08340;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=CCO57_RS08340;old_locus_tag=CCO57_08330 NZ_NPMC01000004.1 Protein Homology CDS 198277 199110 . - 0 ID=cds-WP_094914889.1;Parent=gene-CCO57_RS08340;Dbxref=GenBank:WP_094914889.1;Name=WP_094914889.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=CCO57_RS08340;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_094914889.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 199110 200126 . - . ID=gene-CCO57_RS08345;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=CCO57_RS08345;old_locus_tag=CCO57_08335 NZ_NPMC01000004.1 Protein Homology CDS 199110 200126 . - 0 ID=cds-WP_000290270.1;Parent=gene-CCO57_RS08345;Dbxref=GenBank:WP_000290270.1;Name=WP_000290270.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=CCO57_RS08345;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290270.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 200284 201075 . - . ID=gene-CCO57_RS08350;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=CCO57_RS08350;old_locus_tag=CCO57_08340 NZ_NPMC01000004.1 Protein Homology CDS 200284 201075 . - 0 ID=cds-WP_000517460.1;Parent=gene-CCO57_RS08350;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=CCO57_RS08350;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 201313 202212 . - . ID=gene-CCO57_RS08355;Name=CCO57_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08355;old_locus_tag=CCO57_08345 NZ_NPMC01000004.1 Protein Homology CDS 201313 202212 . - 0 ID=cds-WP_000084582.1;Parent=gene-CCO57_RS08355;Dbxref=GenBank:WP_000084582.1;Name=WP_000084582.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=CCO57_RS08355;product=Dyp-type peroxidase;protein_id=WP_000084582.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 202307 202882 . - . ID=gene-CCO57_RS08360;Name=CCO57_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08360;old_locus_tag=CCO57_08350 NZ_NPMC01000004.1 Protein Homology CDS 202307 202882 . - 0 ID=cds-WP_000838971.1;Parent=gene-CCO57_RS08360;Dbxref=GenBank:WP_000838971.1;Name=WP_000838971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=CCO57_RS08360;product=RpoE-regulated lipoprotein;protein_id=WP_000838971.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 202944 203393 . - . ID=gene-CCO57_RS08365;Name=CCO57_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08365;old_locus_tag=CCO57_08355 NZ_NPMC01000004.1 Protein Homology CDS 202944 203393 . - 0 ID=cds-WP_000842940.1;Parent=gene-CCO57_RS08365;Dbxref=GenBank:WP_000842940.1;Name=WP_000842940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=CCO57_RS08365;product=DUF2919 domain-containing protein;protein_id=WP_000842940.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 203380 203805 . - . ID=gene-CCO57_RS08370;Name=CCO57_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08370;old_locus_tag=CCO57_08360 NZ_NPMC01000004.1 Protein Homology CDS 203380 203805 . - 0 ID=cds-WP_000406008.1;Parent=gene-CCO57_RS08370;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=CCO57_RS08370;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 204018 204887 . + . ID=gene-CCO57_RS08375;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=CCO57_RS08375;old_locus_tag=CCO57_08365 NZ_NPMC01000004.1 Protein Homology CDS 204018 204887 . + 0 ID=cds-WP_000102880.1;Parent=gene-CCO57_RS08375;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=CCO57_RS08375;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 204890 205789 . + . ID=gene-CCO57_RS08380;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=CCO57_RS08380;old_locus_tag=CCO57_08370 NZ_NPMC01000004.1 Protein Homology CDS 204890 205789 . + 0 ID=cds-WP_000801327.1;Parent=gene-CCO57_RS08380;Dbxref=GenBank:WP_000801327.1;Name=WP_000801327.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=CCO57_RS08380;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801327.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 205889 206941 . - . ID=gene-CCO57_RS08385;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=CCO57_RS08385;old_locus_tag=CCO57_08375 NZ_NPMC01000004.1 Protein Homology CDS 205889 206941 . - 0 ID=cds-WP_094914890.1;Parent=gene-CCO57_RS08385;Dbxref=GenBank:WP_094914890.1;Name=WP_094914890.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=CCO57_RS08385;product=HTH-type transcriptional regulator EutR;protein_id=WP_094914890.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 206989 207483 . - . ID=gene-CCO57_RS08390;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=CCO57_RS08390;old_locus_tag=CCO57_08380 NZ_NPMC01000004.1 Protein Homology CDS 206989 207483 . - 0 ID=cds-WP_000606266.1;Parent=gene-CCO57_RS08390;Dbxref=GenBank:WP_000606266.1;Name=WP_000606266.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=CCO57_RS08390;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606266.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 207496 208155 . - . ID=gene-CCO57_RS08395;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=CCO57_RS08395;old_locus_tag=CCO57_08385 NZ_NPMC01000004.1 Protein Homology CDS 207496 208155 . - 0 ID=cds-WP_001111056.1;Parent=gene-CCO57_RS08395;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=CCO57_RS08395;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 208165 209061 . - . ID=gene-CCO57_RS08400;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=CCO57_RS08400;old_locus_tag=CCO57_08390 NZ_NPMC01000004.1 Protein Homology CDS 208165 209061 . - 0 ID=cds-WP_000372354.1;Parent=gene-CCO57_RS08400;Dbxref=GenBank:WP_000372354.1;Name=WP_000372354.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=CCO57_RS08400;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372354.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 209080 210441 . - . ID=gene-CCO57_RS08405;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=CCO57_RS08405;old_locus_tag=CCO57_08395 NZ_NPMC01000004.1 Protein Homology CDS 209080 210441 . - 0 ID=cds-WP_000769990.1;Parent=gene-CCO57_RS08405;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=CCO57_RS08405;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 210453 211856 . - . ID=gene-CCO57_RS08410;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=CCO57_RS08410;old_locus_tag=CCO57_08400 NZ_NPMC01000004.1 Protein Homology CDS 210453 211856 . - 0 ID=cds-WP_094914891.1;Parent=gene-CCO57_RS08410;Dbxref=GenBank:WP_094914891.1;Name=WP_094914891.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=CCO57_RS08410;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_094914891.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 211853 213079 . - . ID=gene-CCO57_RS08415;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=CCO57_RS08415;old_locus_tag=CCO57_08405 NZ_NPMC01000004.1 Protein Homology CDS 211853 213079 . - 0 ID=cds-WP_094914892.1;Parent=gene-CCO57_RS08415;Dbxref=GenBank:WP_094914892.1;Name=WP_094914892.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=CCO57_RS08415;product=ethanolamine utilization protein EutH;protein_id=WP_094914892.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 213199 214386 . - . ID=gene-CCO57_RS08420;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=CCO57_RS08420;old_locus_tag=CCO57_08410 NZ_NPMC01000004.1 Protein Homology CDS 213199 214386 . - 0 ID=cds-WP_001147505.1;Parent=gene-CCO57_RS08420;Dbxref=GenBank:WP_001147505.1;Name=WP_001147505.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=CCO57_RS08420;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147505.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 214376 215215 . - . ID=gene-CCO57_RS08425;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=CCO57_RS08425;old_locus_tag=CCO57_08415 NZ_NPMC01000004.1 Protein Homology CDS 214376 215215 . - 0 ID=cds-WP_000929675.1;Parent=gene-CCO57_RS08425;Dbxref=GenBank:WP_000929675.1;Name=WP_000929675.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=CCO57_RS08425;product=ethanolamine utilization protein EutJ;protein_id=WP_000929675.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 215226 216629 . - . ID=gene-CCO57_RS08430;Name=CCO57_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08430;old_locus_tag=CCO57_08420 NZ_NPMC01000004.1 Protein Homology CDS 215226 216629 . - 0 ID=cds-WP_001075640.1;Parent=gene-CCO57_RS08430;Dbxref=GenBank:WP_001075640.1;Name=WP_001075640.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=CCO57_RS08430;product=aldehyde dehydrogenase family protein;protein_id=WP_001075640.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 216641 216928 . - . ID=gene-CCO57_RS08435;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=CCO57_RS08435;old_locus_tag=CCO57_08425 NZ_NPMC01000004.1 Protein Homology CDS 216641 216928 . - 0 ID=cds-WP_001522340.1;Parent=gene-CCO57_RS08435;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=CCO57_RS08435;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 217041 217331 . - . ID=gene-CCO57_RS08440;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=CCO57_RS08440;old_locus_tag=CCO57_08430 NZ_NPMC01000004.1 Protein Homology CDS 217041 217331 . - 0 ID=cds-WP_000387716.1;Parent=gene-CCO57_RS08440;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=CCO57_RS08440;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 217372 218388 . - . ID=gene-CCO57_RS08445;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO57_RS08445;old_locus_tag=CCO57_08435 NZ_NPMC01000004.1 Protein Homology CDS 217372 218388 . - 0 ID=cds-WP_023203689.1;Parent=gene-CCO57_RS08445;Dbxref=GenBank:WP_023203689.1;Name=WP_023203689.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=CCO57_RS08445;product=phosphate acetyltransferase;protein_id=WP_023203689.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 218385 219188 . - . ID=gene-CCO57_RS08450;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=CCO57_RS08450;old_locus_tag=CCO57_08440 NZ_NPMC01000004.1 Protein Homology CDS 218385 219188 . - 0 ID=cds-WP_000997661.1;Parent=gene-CCO57_RS08450;Dbxref=GenBank:WP_000997661.1;Name=WP_000997661.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=CCO57_RS08450;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997661.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 219185 219874 . - . ID=gene-CCO57_RS08455;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=CCO57_RS08455;old_locus_tag=CCO57_08445 NZ_NPMC01000004.1 Protein Homology CDS 219185 219874 . - 0 ID=cds-WP_000733867.1;Parent=gene-CCO57_RS08455;Dbxref=GenBank:WP_000733867.1;Name=WP_000733867.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=CCO57_RS08455;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733867.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 219852 220331 . - . ID=gene-CCO57_RS08460;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=CCO57_RS08460;old_locus_tag=CCO57_08450 NZ_NPMC01000004.1 Protein Homology CDS 219852 220331 . - 0 ID=cds-WP_000820751.1;Parent=gene-CCO57_RS08460;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=CCO57_RS08460;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 220344 220679 . - . ID=gene-CCO57_RS08465;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=CCO57_RS08465;old_locus_tag=CCO57_08455 NZ_NPMC01000004.1 Protein Homology CDS 220344 220679 . - 0 ID=cds-WP_001031445.1;Parent=gene-CCO57_RS08465;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=CCO57_RS08465;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 221096 223375 . - . ID=gene-CCO57_RS08470;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=CCO57_RS08470;old_locus_tag=CCO57_08460 NZ_NPMC01000004.1 Protein Homology CDS 221096 223375 . - 0 ID=cds-WP_000344299.1;Parent=gene-CCO57_RS08470;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=CCO57_RS08470;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 223647 224597 . + . ID=gene-CCO57_RS08480;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO57_RS08480;old_locus_tag=CCO57_08470 NZ_NPMC01000004.1 Protein Homology CDS 223647 224597 . + 0 ID=cds-WP_001072443.1;Parent=gene-CCO57_RS08480;Dbxref=GenBank:WP_001072443.1;Name=WP_001072443.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=CCO57_RS08480;product=transaldolase;protein_id=WP_001072443.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 224617 226617 . + . ID=gene-CCO57_RS08485;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO57_RS08485;old_locus_tag=CCO57_08475 NZ_NPMC01000004.1 Protein Homology CDS 224617 226617 . + 0 ID=cds-WP_000087328.1;Parent=gene-CCO57_RS08485;Dbxref=GenBank:WP_000087328.1;Name=WP_000087328.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=CCO57_RS08485;product=transketolase;protein_id=WP_000087328.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 226680 226910 . - . ID=gene-CCO57_RS08490;Name=CCO57_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08490;old_locus_tag=CCO57_08480 NZ_NPMC01000004.1 Protein Homology CDS 226680 226910 . - 0 ID=cds-WP_000700635.1;Parent=gene-CCO57_RS08490;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=CCO57_RS08490;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 227039 228082 . - . ID=gene-CCO57_RS08495;Name=CCO57_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08495;old_locus_tag=CCO57_08485 NZ_NPMC01000004.1 Protein Homology CDS 227039 228082 . - 0 ID=cds-WP_001270668.1;Parent=gene-CCO57_RS08495;Dbxref=GenBank:WP_001270668.1;Name=WP_001270668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=CCO57_RS08495;product=DUF1176 domain-containing protein;protein_id=WP_001270668.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 228207 228782 . - . ID=gene-CCO57_RS08500;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=CCO57_RS08500;old_locus_tag=CCO57_08490 NZ_NPMC01000004.1 Protein Homology CDS 228207 228782 . - 0 ID=cds-WP_000084033.1;Parent=gene-CCO57_RS08500;Dbxref=GenBank:WP_000084033.1;Name=WP_000084033.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=CCO57_RS08500;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084033.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 228986 230284 . + . ID=gene-CCO57_RS08505;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=CCO57_RS08505;old_locus_tag=CCO57_08495 NZ_NPMC01000004.1 Protein Homology CDS 228986 230284 . + 0 ID=cds-WP_094914893.1;Parent=gene-CCO57_RS08505;Dbxref=GenBank:WP_094914893.1;Name=WP_094914893.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=CCO57_RS08505;product=penicillin binding protein PBP4B;protein_id=WP_094914893.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 230733 232694 . - . ID=gene-CCO57_RS08510;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=CCO57_RS08510;old_locus_tag=CCO57_08500 NZ_NPMC01000004.1 Protein Homology CDS 230733 232694 . - 0 ID=cds-WP_001528729.1;Parent=gene-CCO57_RS08510;Dbxref=GenBank:WP_001528729.1;Name=WP_001528729.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=CCO57_RS08510;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001528729.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 232880 234580 . + . ID=gene-CCO57_RS08515;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=CCO57_RS08515;old_locus_tag=CCO57_08505 NZ_NPMC01000004.1 Protein Homology CDS 232880 234580 . + 0 ID=cds-WP_000216815.1;Parent=gene-CCO57_RS08515;Dbxref=GenBank:WP_000216815.1;Name=WP_000216815.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=CCO57_RS08515;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000216815.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 234765 237878 . + . ID=gene-CCO57_RS08520;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=CCO57_RS08520;old_locus_tag=CCO57_08510 NZ_NPMC01000004.1 Protein Homology CDS 234765 237878 . + 0 ID=cds-WP_001263074.1;Parent=gene-CCO57_RS08520;Dbxref=GenBank:WP_001263074.1;Name=WP_001263074.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=CCO57_RS08520;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001263074.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 237980 238039 . - . ID=gene-CCO57_RS24065;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=CCO57_RS24065 NZ_NPMC01000004.1 Protein Homology CDS 237980 238039 . - 0 ID=cds-WP_001386977.1;Parent=gene-CCO57_RS24065;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=CCO57_RS24065;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 238452 238808 . + . ID=gene-CCO57_RS08525;Name=CCO57_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08525;old_locus_tag=CCO57_08515 NZ_NPMC01000004.1 Protein Homology CDS 238452 238808 . + 0 ID=cds-WP_000631923.1;Parent=gene-CCO57_RS08525;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=CCO57_RS08525;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 238812 239939 . + . ID=gene-CCO57_RS08530;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=CCO57_RS08530;old_locus_tag=CCO57_08520 NZ_NPMC01000004.1 Protein Homology CDS 238812 239939 . + 0 ID=cds-WP_001277825.1;Parent=gene-CCO57_RS08530;Dbxref=GenBank:WP_001277825.1;Name=WP_001277825.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=CCO57_RS08530;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277825.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 239967 240167 . + . ID=gene-CCO57_RS08535;Name=CCO57_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08535;old_locus_tag=CCO57_08525 NZ_NPMC01000004.1 Protein Homology CDS 239967 240167 . + 0 ID=cds-WP_000383839.1;Parent=gene-CCO57_RS08535;Dbxref=GenBank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=CCO57_RS08535;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 240194 242212 . - . ID=gene-CCO57_RS08540;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=CCO57_RS08540;old_locus_tag=CCO57_08530 NZ_NPMC01000004.1 Protein Homology CDS 240194 242212 . - 0 ID=cds-WP_094914894.1;Parent=gene-CCO57_RS08540;Dbxref=GenBank:WP_094914894.1;Name=WP_094914894.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=CCO57_RS08540;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_094914894.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 242228 243091 . - . ID=gene-CCO57_RS08545;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=CCO57_RS08545;old_locus_tag=CCO57_08535 NZ_NPMC01000004.1 Protein Homology CDS 242228 243091 . - 0 ID=cds-WP_001267519.1;Parent=gene-CCO57_RS08545;Dbxref=GenBank:WP_001267519.1;Name=WP_001267519.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=CCO57_RS08545;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267519.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 243222 243935 . - . ID=gene-CCO57_RS08550;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CCO57_RS08550;old_locus_tag=CCO57_08540 NZ_NPMC01000004.1 Protein Homology CDS 243222 243935 . - 0 ID=cds-WP_001171630.1;Parent=gene-CCO57_RS08550;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=CCO57_RS08550;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 244110 245144 . - . ID=gene-CCO57_RS08555;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=CCO57_RS08555;old_locus_tag=CCO57_08545 NZ_NPMC01000004.1 Protein Homology CDS 244110 245144 . - 0 ID=cds-WP_000331870.1;Parent=gene-CCO57_RS08555;Dbxref=GenBank:WP_000331870.1;Name=WP_000331870.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=CCO57_RS08555;product=outer membrane protein assembly factor BamC;protein_id=WP_000331870.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 245161 246039 . - . ID=gene-CCO57_RS08560;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CCO57_RS08560;old_locus_tag=CCO57_08550 NZ_NPMC01000004.1 Protein Homology CDS 245161 246039 . - 0 ID=cds-WP_000494015.1;Parent=gene-CCO57_RS08560;Dbxref=GenBank:WP_000494015.1;Name=WP_000494015.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=CCO57_RS08560;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494015.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 246185 246757 . + . ID=gene-CCO57_RS08565;Name=CCO57_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08565;old_locus_tag=CCO57_08555 NZ_NPMC01000004.1 Protein Homology CDS 246185 246757 . + 0 ID=cds-WP_000189061.1;Parent=gene-CCO57_RS08565;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=CCO57_RS08565;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 246757 247227 . + . ID=gene-CCO57_RS08570;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CCO57_RS08570;old_locus_tag=CCO57_08560 NZ_NPMC01000004.1 Protein Homology CDS 246757 247227 . + 0 ID=cds-WP_001068686.1;Parent=gene-CCO57_RS08570;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=CCO57_RS08570;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 247274 248413 . - . ID=gene-CCO57_RS08575;Name=CCO57_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08575;old_locus_tag=CCO57_08565 NZ_NPMC01000004.1 Protein Homology CDS 247274 248413 . - 0 ID=cds-WP_000706377.1;Parent=gene-CCO57_RS08575;Dbxref=GenBank:WP_000706377.1;Name=WP_000706377.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=CCO57_RS08575;product=glycerate kinase;protein_id=WP_000706377.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 248419 249687 . - . ID=gene-CCO57_RS08580;Name=CCO57_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08580;old_locus_tag=CCO57_08570 NZ_NPMC01000004.1 Protein Homology CDS 248419 249687 . - 0 ID=cds-WP_000200859.1;Parent=gene-CCO57_RS08580;Dbxref=GenBank:WP_000200859.1;Name=WP_000200859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=CCO57_RS08580;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 249755 250942 . - . ID=gene-CCO57_RS08585;Name=CCO57_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08585;old_locus_tag=CCO57_08575 NZ_NPMC01000004.1 Protein Homology CDS 249755 250942 . - 0 ID=cds-WP_001533732.1;Parent=gene-CCO57_RS08585;Dbxref=GenBank:WP_001533732.1;Name=WP_001533732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=CCO57_RS08585;product=sugar diacid recognition domain-containing protein;protein_id=WP_001533732.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 251218 252285 . - . ID=gene-CCO57_RS08590;Name=CCO57_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08590;old_locus_tag=CCO57_08580 NZ_NPMC01000004.1 Protein Homology CDS 251218 252285 . - 0 ID=cds-WP_000892056.1;Parent=gene-CCO57_RS08590;Dbxref=GenBank:WP_000892056.1;Name=WP_000892056.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=CCO57_RS08590;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 252493 253956 . + . ID=gene-CCO57_RS08595;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=CCO57_RS08595;old_locus_tag=CCO57_08585 NZ_NPMC01000004.1 Protein Homology CDS 252493 253956 . + 0 ID=cds-WP_000489631.1;Parent=gene-CCO57_RS08595;Dbxref=GenBank:WP_000489631.1;Name=WP_000489631.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=CCO57_RS08595;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489631.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 253996 254355 . + . ID=gene-CCO57_RS08600;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CCO57_RS08600;old_locus_tag=CCO57_08590 NZ_NPMC01000004.1 Protein Homology CDS 253996 254355 . + 0 ID=cds-WP_000132650.1;Parent=gene-CCO57_RS08600;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=CCO57_RS08600;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 254382 255083 . - . ID=gene-CCO57_RS08605;Name=CCO57_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08605;old_locus_tag=CCO57_08595 NZ_NPMC01000004.1 Protein Homology CDS 254382 255083 . - 0 ID=cds-WP_061835882.1;Parent=gene-CCO57_RS08605;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=CCO57_RS08605;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 255178 256467 . - . ID=gene-CCO57_RS08610;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=CCO57_RS08610;old_locus_tag=CCO57_08600 NZ_NPMC01000004.1 Protein Homology CDS 255178 256467 . - 0 ID=cds-WP_000198344.1;Parent=gene-CCO57_RS08610;Dbxref=GenBank:WP_000198344.1;Name=WP_000198344.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=CCO57_RS08610;product=uracil permease;protein_id=WP_000198344.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 256555 257181 . - . ID=gene-CCO57_RS08615;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CCO57_RS08615;old_locus_tag=CCO57_08605 NZ_NPMC01000004.1 Protein Homology CDS 256555 257181 . - 0 ID=cds-WP_000706208.1;Parent=gene-CCO57_RS08615;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=CCO57_RS08615;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 257595 258632 . + . ID=gene-CCO57_RS08620;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CCO57_RS08620;old_locus_tag=CCO57_08610 NZ_NPMC01000004.1 Protein Homology CDS 257595 258632 . + 0 ID=cds-WP_000130477.1;Parent=gene-CCO57_RS08620;Dbxref=GenBank:WP_000130477.1;Name=WP_000130477.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=CCO57_RS08620;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130477.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 258632 259270 . + . ID=gene-CCO57_RS08625;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CCO57_RS08625;old_locus_tag=CCO57_08615 NZ_NPMC01000004.1 Protein Homology CDS 258632 259270 . + 0 ID=cds-WP_001028588.1;Parent=gene-CCO57_RS08625;Dbxref=GenBank:WP_001028588.1;Name=WP_001028588.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=CCO57_RS08625;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028588.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 259459 261525 . + . ID=gene-CCO57_RS08630;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=CCO57_RS08630;old_locus_tag=CCO57_08620 NZ_NPMC01000004.1 Protein Homology CDS 259459 261525 . + 0 ID=cds-WP_000529555.1;Parent=gene-CCO57_RS08630;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=CCO57_RS08630;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 261530 263071 . + . ID=gene-CCO57_RS08635;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CCO57_RS08635;old_locus_tag=CCO57_08625 NZ_NPMC01000004.1 Protein Homology CDS 261530 263071 . + 0 ID=cds-WP_079822177.1;Parent=gene-CCO57_RS08635;Dbxref=GenBank:WP_079822177.1;Name=WP_079822177.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=CCO57_RS08635;product=exopolyphosphatase;protein_id=WP_079822177.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 263107 265320 . - . ID=gene-CCO57_RS08640;Name=CCO57_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08640;old_locus_tag=CCO57_08630 NZ_NPMC01000004.1 Protein Homology CDS 263107 265320 . - 0 ID=cds-WP_079822178.1;Parent=gene-CCO57_RS08640;Dbxref=GenBank:WP_079822178.1;Name=WP_079822178.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=CCO57_RS08640;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_079822178.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 265417 265554 . - . ID=gene-CCO57_RS08645;Name=CCO57_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08645;old_locus_tag=CCO57_08635 NZ_NPMC01000004.1 Protein Homology CDS 265417 265554 . - 0 ID=cds-WP_001581698.1;Parent=gene-CCO57_RS08645;Dbxref=GenBank:WP_001581698.1;Name=WP_001581698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=CCO57_RS08645;product=hypothetical protein;protein_id=WP_001581698.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 265733 265924 . + . ID=gene-CCO57_RS08650;Name=CCO57_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08650;old_locus_tag=CCO57_08640 NZ_NPMC01000004.1 Protein Homology CDS 265733 265924 . + 0 ID=cds-WP_000075924.1;Parent=gene-CCO57_RS08650;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=CCO57_RS08650;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_NPMC01000004.1 RefSeq pseudogene 266003 266146 . - . ID=gene-CCO57_RS24555;Name=CCO57_RS24555;end_range=266146,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24555;partial=true;pseudo=true NZ_NPMC01000004.1 Protein Homology CDS 266003 266146 . - 0 ID=cds-CCO57_RS24555;Parent=gene-CCO57_RS24555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=266146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=CCO57_RS24555;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000004.1 RefSeq pseudogene 266414 266635 . + . ID=gene-CCO57_RS24930;Name=CCO57_RS24930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24930;old_locus_tag=CCO57_08650;partial=true;pseudo=true;start_range=.,266414 NZ_NPMC01000004.1 Protein Homology CDS 266414 266635 . + 0 ID=cds-CCO57_RS24930;Parent=gene-CCO57_RS24930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_125368327.1;locus_tag=CCO57_RS24930;partial=true;product=hypothetical protein;pseudo=true;start_range=.,266414;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 266620 266949 . + . ID=gene-CCO57_RS08665;Name=CCO57_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08665;old_locus_tag=CCO57_08655 NZ_NPMC01000004.1 Protein Homology CDS 266620 266949 . + 0 ID=cds-WP_079982295.1;Parent=gene-CCO57_RS08665;Dbxref=GenBank:WP_079982295.1;Name=WP_079982295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=CCO57_RS08665;product=DUF1493 family protein;protein_id=WP_079982295.1;transl_table=11 NZ_NPMC01000004.1 RefSeq pseudogene 267026 267346 . - . ID=gene-CCO57_RS08670;Name=CCO57_RS08670;end_range=267346,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS08670;old_locus_tag=CCO57_08660;partial=true;pseudo=true;start_range=.,267026 NZ_NPMC01000004.1 Protein Homology CDS 267026 267346 . - 0 ID=cds-CCO57_RS08670;Parent=gene-CCO57_RS08670;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=267346,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611823.1;locus_tag=CCO57_RS08670;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,267026;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 267482 269059 . - . ID=gene-CCO57_RS08675;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CCO57_RS08675;old_locus_tag=CCO57_08665 NZ_NPMC01000004.1 Protein Homology CDS 267482 269059 . - 0 ID=cds-WP_000138296.1;Parent=gene-CCO57_RS08675;Dbxref=GenBank:WP_000138296.1;Name=WP_000138296.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=CCO57_RS08675;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138296.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 269129 270595 . - . ID=gene-CCO57_RS08680;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CCO57_RS08680;old_locus_tag=CCO57_08670 NZ_NPMC01000004.1 Protein Homology CDS 269129 270595 . - 0 ID=cds-WP_000944174.1;Parent=gene-CCO57_RS08680;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=CCO57_RS08680;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 270756 272105 . + . ID=gene-CCO57_RS08685;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CCO57_RS08685;old_locus_tag=CCO57_08675 NZ_NPMC01000004.1 Protein Homology CDS 270756 272105 . + 0 ID=cds-WP_020899077.1;Parent=gene-CCO57_RS08685;Dbxref=GenBank:WP_020899077.1;Name=WP_020899077.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=CCO57_RS08685;product=exodeoxyribonuclease VII large subunit;protein_id=WP_020899077.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 272267 277633 . - . ID=gene-CCO57_RS08690;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=CCO57_RS08690;old_locus_tag=CCO57_08680 NZ_NPMC01000004.1 Protein Homology CDS 272267 277633 . - 0 ID=cds-WP_094914895.1;Parent=gene-CCO57_RS08690;Dbxref=GenBank:WP_094914895.1;Name=WP_094914895.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=CCO57_RS08690;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_094914895.1;transl_table=11 NZ_NPMC01000004.1 RefSeq pseudogene 278125 278225 . - . ID=gene-CCO57_RS24935;Name=CCO57_RS24935;end_range=278225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24935;old_locus_tag=CCO57_08685;partial=true;pseudo=true NZ_NPMC01000004.1 Protein Homology CDS 278125 278225 . - 0 ID=cds-CCO57_RS24935;Parent=gene-CCO57_RS24935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=278225,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_309258417.1;locus_tag=CCO57_RS24935;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 278226 285542 . - . ID=gene-CCO57_RS08700;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=CCO57_RS08700;old_locus_tag=CCO57_08690 NZ_NPMC01000004.1 Protein Homology CDS 278226 285542 . - 0 ID=cds-WP_094914896.1;Parent=gene-CCO57_RS08700;Dbxref=GenBank:WP_094914896.1;Name=WP_094914896.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=CCO57_RS08700;product=DUF823/DUF824 repeat adhesin RatB;protein_id=WP_094914896.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 285668 291271 . - . ID=gene-CCO57_RS08705;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=CCO57_RS08705;old_locus_tag=CCO57_08695 NZ_NPMC01000004.1 Protein Homology CDS 285668 291271 . - 0 ID=cds-WP_094914897.1;Parent=gene-CCO57_RS08705;Dbxref=GenBank:WP_094914897.1;Name=WP_094914897.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081439.1;locus_tag=CCO57_RS08705;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_094914897.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 291391 292359 . - . ID=gene-CCO57_RS08710;Name=CCO57_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08710;old_locus_tag=CCO57_08700 NZ_NPMC01000004.1 Protein Homology CDS 291391 292359 . - 0 ID=cds-WP_094914898.1;Parent=gene-CCO57_RS08710;Dbxref=GenBank:WP_094914898.1;Name=WP_094914898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=CCO57_RS08710;product=SinI family autotransporter-associated protein;protein_id=WP_094914898.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 292417 294609 . - . ID=gene-CCO57_RS08715;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=CCO57_RS08715;old_locus_tag=CCO57_08705 NZ_NPMC01000004.1 Protein Homology CDS 292417 294609 . - 0 ID=cds-WP_094914899.1;Parent=gene-CCO57_RS08715;Dbxref=GenBank:WP_094914899.1;Name=WP_094914899.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=CCO57_RS08715;product=intimin-like inverse autotransporter SinH;protein_id=WP_094914899.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 294956 295177 . - . ID=gene-CCO57_RS08720;Name=CCO57_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08720;old_locus_tag=CCO57_08710 NZ_NPMC01000004.1 Protein Homology CDS 294956 295177 . - 0 ID=cds-WP_001606920.1;Parent=gene-CCO57_RS08720;Dbxref=GenBank:WP_001606920.1;Name=WP_001606920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=CCO57_RS08720;product=zinc ribbon domain-containing protein;protein_id=WP_001606920.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 295266 296738 . - . ID=gene-CCO57_RS08725;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CCO57_RS08725;old_locus_tag=CCO57_08715 NZ_NPMC01000004.1 Protein Homology CDS 295266 296738 . - 0 ID=cds-WP_000249411.1;Parent=gene-CCO57_RS08725;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=CCO57_RS08725;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 296855 298033 . - . ID=gene-CCO57_RS08730;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=CCO57_RS08730;old_locus_tag=CCO57_08720 NZ_NPMC01000004.1 Protein Homology CDS 296855 298033 . - 0 ID=cds-WP_001177071.1;Parent=gene-CCO57_RS08730;Dbxref=GenBank:WP_001177071.1;Name=WP_001177071.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=CCO57_RS08730;product=outer membrane protein assembly factor BamB;protein_id=WP_001177071.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 298044 298664 . - . ID=gene-CCO57_RS08735;Name=CCO57_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08735;old_locus_tag=CCO57_08725 NZ_NPMC01000004.1 Protein Homology CDS 298044 298664 . - 0 ID=cds-WP_000409190.1;Parent=gene-CCO57_RS08735;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=CCO57_RS08735;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 298678 299952 . - . ID=gene-CCO57_RS08740;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CCO57_RS08740;old_locus_tag=CCO57_08730 NZ_NPMC01000004.1 Protein Homology CDS 298678 299952 . - 0 ID=cds-WP_001107139.1;Parent=gene-CCO57_RS08740;Dbxref=GenBank:WP_001107139.1;Name=WP_001107139.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=CCO57_RS08740;product=histidine--tRNA ligase;protein_id=WP_001107139.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 300063 301181 . - . ID=gene-CCO57_RS08745;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CCO57_RS08745;old_locus_tag=CCO57_08735 NZ_NPMC01000004.1 Protein Homology CDS 300063 301181 . - 0 ID=cds-WP_000551832.1;Parent=gene-CCO57_RS08745;Dbxref=GenBank:WP_000551832.1;Name=WP_000551832.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=CCO57_RS08745;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551832.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 301208 302212 . - . ID=gene-CCO57_RS08750;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=CCO57_RS08750;old_locus_tag=CCO57_08740 NZ_NPMC01000004.1 Protein Homology CDS 301208 302212 . - 0 ID=cds-WP_001090900.1;Parent=gene-CCO57_RS08750;Dbxref=GenBank:WP_001090900.1;Name=WP_001090900.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=CCO57_RS08750;product=cytoskeleton protein RodZ;protein_id=WP_001090900.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 302505 303671 . - . ID=gene-CCO57_RS08760;Name=CCO57_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08760;old_locus_tag=CCO57_08750 NZ_NPMC01000004.1 Protein Homology CDS 302505 303671 . - 0 ID=cds-WP_000003206.1;Parent=gene-CCO57_RS08760;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=CCO57_RS08760;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 303878 304309 . - . ID=gene-CCO57_RS08765;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CCO57_RS08765;old_locus_tag=CCO57_08755 NZ_NPMC01000004.1 Protein Homology CDS 303878 304309 . - 0 ID=cds-WP_000963846.1;Parent=gene-CCO57_RS08765;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=CCO57_RS08765;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 304430 305293 . - . ID=gene-CCO57_RS08770;Name=CCO57_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08770;old_locus_tag=CCO57_08760 NZ_NPMC01000004.1 Protein Homology CDS 304430 305293 . - 0 ID=cds-WP_000247781.1;Parent=gene-CCO57_RS08770;Dbxref=GenBank:WP_000247781.1;Name=WP_000247781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=CCO57_RS08770;product=4Fe-4S binding protein;protein_id=WP_000247781.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 305293 306102 . - . ID=gene-CCO57_RS08775;Name=CCO57_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08775;old_locus_tag=CCO57_08765 NZ_NPMC01000004.1 Protein Homology CDS 305293 306102 . - 0 ID=cds-WP_031568487.1;Parent=gene-CCO57_RS08775;Dbxref=GenBank:WP_031568487.1;Name=WP_031568487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=CCO57_RS08775;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_031568487.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 306095 306724 . - . ID=gene-CCO57_RS08780;Name=CCO57_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08780;old_locus_tag=CCO57_08770 NZ_NPMC01000004.1 Protein Homology CDS 306095 306724 . - 0 ID=cds-WP_023136462.1;Parent=gene-CCO57_RS08780;Dbxref=GenBank:WP_023136462.1;Name=WP_023136462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=CCO57_RS08780;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_023136462.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 306721 309099 . - . ID=gene-CCO57_RS08785;Name=CCO57_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08785;old_locus_tag=CCO57_08775 NZ_NPMC01000004.1 Protein Homology CDS 306721 309099 . - 0 ID=cds-WP_310887794.1;Parent=gene-CCO57_RS08785;Dbxref=GenBank:WP_310887794.1;Name=WP_310887794.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=CCO57_RS08785;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_310887794.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 309255 311570 . - . ID=gene-CCO57_RS08790;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=CCO57_RS08790;old_locus_tag=CCO57_08780 NZ_NPMC01000004.1 Protein Homology CDS 309255 311570 . - 0 ID=cds-WP_094914901.1;Parent=gene-CCO57_RS08790;Dbxref=GenBank:WP_094914901.1;Name=WP_094914901.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=CCO57_RS08790;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_094914901.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 311571 316505 . - . ID=gene-CCO57_RS08795;Name=CCO57_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08795;old_locus_tag=CCO57_08785 NZ_NPMC01000004.1 Protein Homology CDS 311571 316505 . - 0 ID=cds-WP_094914902.1;Parent=gene-CCO57_RS08795;Dbxref=GenBank:WP_094914902.1;Name=WP_094914902.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=CCO57_RS08795;product=alpha-2-macroglobulin family protein;protein_id=WP_094914902.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 316714 317556 . + . ID=gene-CCO57_RS08800;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO57_RS08800;old_locus_tag=CCO57_08790 NZ_NPMC01000004.1 Protein Homology CDS 316714 317556 . + 0 ID=cds-WP_000205242.1;Parent=gene-CCO57_RS08800;Dbxref=GenBank:WP_000205242.1;Name=WP_000205242.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205242.1;locus_tag=CCO57_RS08800;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000205242.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 317972 318088 . + . ID=gene-CCO57_RS24800;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=CCO57_RS24800 NZ_NPMC01000004.1 Protein Homology CDS 317972 318088 . + 0 ID=cds-WP_242617172.1;Parent=gene-CCO57_RS24800;Dbxref=GenBank:WP_242617172.1;Name=WP_242617172.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=CCO57_RS24800;product=small toxic inner membrane protein TimP;protein_id=WP_242617172.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 318125 318910 . - . ID=gene-CCO57_RS08810;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO57_RS08810;old_locus_tag=CCO57_08800 NZ_NPMC01000004.1 Protein Homology CDS 318125 318910 . - 0 ID=cds-WP_023219892.1;Parent=gene-CCO57_RS08810;Dbxref=GenBank:WP_023219892.1;Name=WP_023219892.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=CCO57_RS08810;product=enhanced serine sensitivity protein SseB;protein_id=WP_023219892.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 319020 320303 . - . ID=gene-CCO57_RS08815;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=CCO57_RS08815;old_locus_tag=CCO57_08805 NZ_NPMC01000004.1 Protein Homology CDS 319020 320303 . - 0 ID=cds-WP_000133541.1;Parent=gene-CCO57_RS08815;Dbxref=GenBank:WP_000133541.1;Name=WP_000133541.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=CCO57_RS08815;product=aminopeptidase PepB;protein_id=WP_000133541.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 320357 320557 . - . ID=gene-CCO57_RS08820;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=CCO57_RS08820;old_locus_tag=CCO57_08810 NZ_NPMC01000004.1 Protein Homology CDS 320357 320557 . - 0 ID=cds-WP_000523621.1;Parent=gene-CCO57_RS08820;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=CCO57_RS08820;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 320569 320904 . - . ID=gene-CCO57_RS08825;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=CCO57_RS08825;old_locus_tag=CCO57_08815 NZ_NPMC01000004.1 Protein Homology CDS 320569 320904 . - 0 ID=cds-WP_001124466.1;Parent=gene-CCO57_RS08825;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=CCO57_RS08825;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 320906 322756 . - . ID=gene-CCO57_RS08830;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=CCO57_RS08830;old_locus_tag=CCO57_08820 NZ_NPMC01000004.1 Protein Homology CDS 320906 322756 . - 0 ID=cds-WP_094914903.1;Parent=gene-CCO57_RS08830;Dbxref=GenBank:WP_094914903.1;Name=WP_094914903.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=CCO57_RS08830;product=Fe-S protein assembly chaperone HscA;protein_id=WP_094914903.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 322769 323284 . - . ID=gene-CCO57_RS08835;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=CCO57_RS08835;old_locus_tag=CCO57_08825 NZ_NPMC01000004.1 Protein Homology CDS 322769 323284 . - 0 ID=cds-WP_001635167.1;Parent=gene-CCO57_RS08835;Dbxref=GenBank:WP_001635167.1;Name=WP_001635167.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=CCO57_RS08835;product=co-chaperone HscB;protein_id=WP_001635167.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 323480 323803 . - . ID=gene-CCO57_RS08840;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=CCO57_RS08840;old_locus_tag=CCO57_08830 NZ_NPMC01000004.1 Protein Homology CDS 323480 323803 . - 0 ID=cds-WP_000028952.1;Parent=gene-CCO57_RS08840;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=CCO57_RS08840;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 323832 324218 . - . ID=gene-CCO57_RS08845;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=CCO57_RS08845;old_locus_tag=CCO57_08835 NZ_NPMC01000004.1 Protein Homology CDS 323832 324218 . - 0 ID=cds-WP_000331704.1;Parent=gene-CCO57_RS08845;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=CCO57_RS08845;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 324246 325460 . - . ID=gene-CCO57_RS08850;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=CCO57_RS08850;old_locus_tag=CCO57_08840 NZ_NPMC01000004.1 Protein Homology CDS 324246 325460 . - 0 ID=cds-WP_000775263.1;Parent=gene-CCO57_RS08850;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=CCO57_RS08850;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 325641 326135 . - . ID=gene-CCO57_RS08855;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=CCO57_RS08855;old_locus_tag=CCO57_08845 NZ_NPMC01000004.1 Protein Homology CDS 325641 326135 . - 0 ID=cds-WP_001241346.1;Parent=gene-CCO57_RS08855;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=CCO57_RS08855;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 326295 327026 . - . ID=gene-CCO57_RS08860;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=CCO57_RS08860;old_locus_tag=CCO57_08850 NZ_NPMC01000004.1 Protein Homology CDS 326295 327026 . - 0 ID=cds-WP_001630370.1;Parent=gene-CCO57_RS08860;Dbxref=GenBank:WP_001630370.1;Name=WP_001630370.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=CCO57_RS08860;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_001630370.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 327145 327948 . + . ID=gene-CCO57_RS08865;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=CCO57_RS08865;old_locus_tag=CCO57_08855 NZ_NPMC01000004.1 Protein Homology CDS 327145 327948 . + 0 ID=cds-WP_000553473.1;Parent=gene-CCO57_RS08865;Dbxref=GenBank:WP_000553473.1;Name=WP_000553473.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=CCO57_RS08865;product=inositol-1-monophosphatase;protein_id=WP_000553473.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 328093 328971 . + . ID=gene-CCO57_RS08870;Name=CCO57_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08870;old_locus_tag=CCO57_08860 NZ_NPMC01000004.1 Protein Homology CDS 328093 328971 . + 0 ID=cds-WP_038393913.1;Parent=gene-CCO57_RS08870;Dbxref=GenBank:WP_038393913.1;Name=WP_038393913.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=CCO57_RS08870;product=alpha/beta hydrolase;protein_id=WP_038393913.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 329153 330196 . + . ID=gene-CCO57_RS08875;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=CCO57_RS08875;old_locus_tag=CCO57_08865 NZ_NPMC01000004.1 Protein Homology CDS 329153 330196 . + 0 ID=cds-WP_000985209.1;Parent=gene-CCO57_RS08875;Dbxref=GenBank:WP_000985209.1;Name=WP_000985209.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=CCO57_RS08875;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985209.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 330200 331018 . + . ID=gene-CCO57_RS08880;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=CCO57_RS08880;old_locus_tag=CCO57_08870 NZ_NPMC01000004.1 Protein Homology CDS 330200 331018 . + 0 ID=cds-WP_000017587.1;Parent=gene-CCO57_RS08880;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=CCO57_RS08880;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 331029 332042 . + . ID=gene-CCO57_RS08885;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=CCO57_RS08885;old_locus_tag=CCO57_08875 NZ_NPMC01000004.1 Protein Homology CDS 331029 332042 . + 0 ID=cds-WP_000020685.1;Parent=gene-CCO57_RS08885;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=CCO57_RS08885;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 332043 333029 . - . ID=gene-CCO57_RS08890;Name=CCO57_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08890;old_locus_tag=CCO57_08880 NZ_NPMC01000004.1 Protein Homology CDS 332043 333029 . - 0 ID=cds-WP_001528654.1;Parent=gene-CCO57_RS08890;Dbxref=GenBank:WP_001528654.1;Name=WP_001528654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=CCO57_RS08890;product=nickel/cobalt transporter;protein_id=WP_001528654.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 333020 333658 . - . ID=gene-CCO57_RS08895;Name=CCO57_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08895;old_locus_tag=CCO57_08885 NZ_NPMC01000004.1 Protein Homology CDS 333020 333658 . - 0 ID=cds-WP_094914904.1;Parent=gene-CCO57_RS08895;Dbxref=GenBank:WP_094914904.1;Name=WP_094914904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=CCO57_RS08895;product=DUF1007 family protein;protein_id=WP_094914904.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 333784 335061 . + . ID=gene-CCO57_RS08900;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=CCO57_RS08900;old_locus_tag=CCO57_08890 NZ_NPMC01000004.1 Protein Homology CDS 333784 335061 . + 0 ID=cds-WP_000982961.1;Parent=gene-CCO57_RS08900;Dbxref=GenBank:WP_000982961.1;Name=WP_000982961.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=CCO57_RS08900;product=stationary phase inducible protein CsiE;protein_id=WP_000982961.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 335056 336195 . - . ID=gene-CCO57_RS08905;Name=CCO57_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08905;old_locus_tag=CCO57_08895 NZ_NPMC01000004.1 Protein Homology CDS 335056 336195 . - 0 ID=cds-WP_001173730.1;Parent=gene-CCO57_RS08905;Dbxref=GenBank:WP_001173730.1;Name=WP_001173730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=CCO57_RS08905;product=3-phenylpropionate MFS transporter;protein_id=WP_001173730.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 336391 337644 . - . ID=gene-CCO57_RS08910;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CCO57_RS08910;old_locus_tag=CCO57_08900 NZ_NPMC01000004.1 Protein Homology CDS 336391 337644 . - 0 ID=cds-WP_000919173.1;Parent=gene-CCO57_RS08910;Dbxref=GenBank:WP_000919173.1;Name=WP_000919173.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=CCO57_RS08910;product=serine hydroxymethyltransferase;protein_id=WP_000919173.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 337969 339159 . + . ID=gene-CCO57_RS08915;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=CCO57_RS08915;old_locus_tag=CCO57_08905 NZ_NPMC01000004.1 Protein Homology CDS 337969 339159 . + 0 ID=cds-WP_000883153.1;Parent=gene-CCO57_RS08915;Dbxref=GenBank:WP_000883153.1;Name=WP_000883153.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=CCO57_RS08915;product=NO-inducible flavohemoprotein;protein_id=WP_000883153.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 339341 340885 . + . ID=gene-CCO57_RS08920;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=CCO57_RS08920;old_locus_tag=CCO57_08910 NZ_NPMC01000004.1 Protein Homology CDS 339341 340885 . + 0 ID=cds-WP_001187142.1;Parent=gene-CCO57_RS08920;Dbxref=GenBank:WP_001187142.1;Name=WP_001187142.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=CCO57_RS08920;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187142.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 341246 342583 . + . ID=gene-CCO57_RS08925;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=CCO57_RS08925;old_locus_tag=CCO57_08915 NZ_NPMC01000004.1 Protein Homology CDS 341246 342583 . + 0 ID=cds-WP_000100009.1;Parent=gene-CCO57_RS08925;Dbxref=GenBank:WP_000100009.1;Name=WP_000100009.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=CCO57_RS08925;product=cadaverine/lysine antiporter;protein_id=WP_000100009.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 342666 344810 . + . ID=gene-CCO57_RS08930;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=CCO57_RS08930;old_locus_tag=CCO57_08920 NZ_NPMC01000004.1 Protein Homology CDS 342666 344810 . + 0 ID=cds-WP_001100652.1;Parent=gene-CCO57_RS08930;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=CCO57_RS08930;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 344866 346326 . + . ID=gene-CCO57_RS08935;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=CCO57_RS08935;old_locus_tag=CCO57_08925 NZ_NPMC01000004.1 Protein Homology CDS 344866 346326 . + 0 ID=cds-WP_000856788.1;Parent=gene-CCO57_RS08935;Dbxref=GenBank:WP_000856788.1;Name=WP_000856788.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=CCO57_RS08935;product=dipeptide permease DtpD;protein_id=WP_000856788.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 346375 346713 . - . ID=gene-CCO57_RS08940;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=CCO57_RS08940;old_locus_tag=CCO57_08930 NZ_NPMC01000004.1 Protein Homology CDS 346375 346713 . - 0 ID=cds-WP_000717694.1;Parent=gene-CCO57_RS08940;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=CCO57_RS08940;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 346790 348124 . - . ID=gene-CCO57_RS08945;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=CCO57_RS08945;old_locus_tag=CCO57_08935 NZ_NPMC01000004.1 Protein Homology CDS 346790 348124 . - 0 ID=cds-WP_024131115.1;Parent=gene-CCO57_RS08945;Dbxref=GenBank:WP_024131115.1;Name=WP_024131115.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=CCO57_RS08945;product=two-component system response regulator GlrR;protein_id=WP_024131115.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 348124 348888 . - . ID=gene-CCO57_RS08950;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=CCO57_RS08950;old_locus_tag=CCO57_08940 NZ_NPMC01000004.1 Protein Homology CDS 348124 348888 . - 0 ID=cds-WP_001054246.1;Parent=gene-CCO57_RS08950;Dbxref=GenBank:WP_001054246.1;Name=WP_001054246.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=CCO57_RS08950;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001054246.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 348890 350320 . - . ID=gene-CCO57_RS08955;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=CCO57_RS08955;old_locus_tag=CCO57_08945 NZ_NPMC01000004.1 Protein Homology CDS 348890 350320 . - 0 ID=cds-WP_023231178.1;Parent=gene-CCO57_RS08955;Dbxref=GenBank:WP_023231178.1;Name=WP_023231178.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=CCO57_RS08955;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_023231178.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 350969 354856 . - . ID=gene-CCO57_RS08960;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=CCO57_RS08960;old_locus_tag=CCO57_08950 NZ_NPMC01000004.1 Protein Homology CDS 350969 354856 . - 0 ID=cds-WP_000970053.1;Parent=gene-CCO57_RS08960;Dbxref=GenBank:WP_000970053.1;Name=WP_000970053.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=CCO57_RS08960;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970053.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 354878 355111 . + . ID=gene-CCO57_RS08965;Name=CCO57_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08965;old_locus_tag=CCO57_08955 NZ_NPMC01000004.1 Protein Homology CDS 354878 355111 . + 0 ID=cds-WP_001543559.1;Parent=gene-CCO57_RS08965;Dbxref=GenBank:WP_001543559.1;Name=WP_001543559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=CCO57_RS08965;product=hypothetical protein;protein_id=WP_001543559.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 355112 356656 . + . ID=gene-CCO57_RS08970;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=CCO57_RS08970;old_locus_tag=CCO57_08960 NZ_NPMC01000004.1 Protein Homology CDS 355112 356656 . + 0 ID=cds-WP_000734243.1;Parent=gene-CCO57_RS08970;Dbxref=GenBank:WP_000734243.1;Name=WP_000734243.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=CCO57_RS08970;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734243.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 356707 357258 . - . ID=gene-CCO57_RS08975;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CCO57_RS08975;old_locus_tag=CCO57_08965 NZ_NPMC01000004.1 Protein Homology CDS 356707 357258 . - 0 ID=cds-WP_001134560.1;Parent=gene-CCO57_RS08975;Dbxref=GenBank:WP_001134560.1;Name=WP_001134560.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=CCO57_RS08975;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134560.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 357283 357918 . - . ID=gene-CCO57_RS08980;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=CCO57_RS08980;old_locus_tag=CCO57_08970 NZ_NPMC01000004.1 Protein Homology CDS 357283 357918 . - 0 ID=cds-WP_000253558.1;Parent=gene-CCO57_RS08980;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=CCO57_RS08980;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 357922 359283 . - . ID=gene-CCO57_RS08985;Name=CCO57_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08985;old_locus_tag=CCO57_08975 NZ_NPMC01000004.1 Protein Homology CDS 357922 359283 . - 0 ID=cds-WP_000361666.1;Parent=gene-CCO57_RS08985;Dbxref=GenBank:WP_000361666.1;Name=WP_000361666.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=CCO57_RS08985;product=PTS transporter subunit EIIC;protein_id=WP_000361666.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 359294 360187 . - . ID=gene-CCO57_RS08990;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CCO57_RS08990;old_locus_tag=CCO57_08980 NZ_NPMC01000004.1 Protein Homology CDS 359294 360187 . - 0 ID=cds-WP_001048531.1;Parent=gene-CCO57_RS08990;Dbxref=GenBank:WP_001048531.1;Name=WP_001048531.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=CCO57_RS08990;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001048531.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 360303 361151 . + . ID=gene-CCO57_RS08995;Name=CCO57_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS08995;old_locus_tag=CCO57_08985 NZ_NPMC01000004.1 Protein Homology CDS 360303 361151 . + 0 ID=cds-WP_000995694.1;Parent=gene-CCO57_RS08995;Dbxref=GenBank:WP_000995694.1;Name=WP_000995694.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=CCO57_RS08995;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995694.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 361190 362107 . - . ID=gene-CCO57_RS09000;Name=CCO57_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09000;old_locus_tag=CCO57_08990 NZ_NPMC01000004.1 Protein Homology CDS 361190 362107 . - 0 ID=cds-WP_000684034.1;Parent=gene-CCO57_RS09000;Dbxref=GenBank:WP_000684034.1;Name=WP_000684034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=CCO57_RS09000;product=oxidoreductase;protein_id=WP_000684034.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 362129 363325 . - . ID=gene-CCO57_RS09005;Name=CCO57_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09005;old_locus_tag=CCO57_08995 NZ_NPMC01000004.1 Protein Homology CDS 362129 363325 . - 0 ID=cds-WP_094914905.1;Parent=gene-CCO57_RS09005;Dbxref=GenBank:WP_094914905.1;Name=WP_094914905.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=CCO57_RS09005;product=L-lactate MFS transporter;protein_id=WP_094914905.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 363441 364367 . + . ID=gene-CCO57_RS09010;Name=CCO57_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09010;old_locus_tag=CCO57_09000 NZ_NPMC01000004.1 Protein Homology CDS 363441 364367 . + 0 ID=cds-WP_086776817.1;Parent=gene-CCO57_RS09010;Dbxref=GenBank:WP_086776817.1;Name=WP_086776817.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=CCO57_RS09010;product=LysR family transcriptional regulator;protein_id=WP_086776817.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 364405 364665 . + . ID=gene-CCO57_RS09015;Name=CCO57_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09015;old_locus_tag=CCO57_09005 NZ_NPMC01000004.1 Protein Homology CDS 364405 364665 . + 0 ID=cds-WP_001196290.1;Parent=gene-CCO57_RS09015;Dbxref=GenBank:WP_001196290.1;Name=WP_001196290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=CCO57_RS09015;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196290.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 364777 365157 . - . ID=gene-CCO57_RS09020;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CCO57_RS09020;old_locus_tag=CCO57_09010 NZ_NPMC01000004.1 Protein Homology CDS 364777 365157 . - 0 ID=cds-WP_000986043.1;Parent=gene-CCO57_RS09020;Dbxref=GenBank:WP_000986043.1;Name=WP_000986043.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=CCO57_RS09020;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 365157 365888 . - . ID=gene-CCO57_RS09025;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=CCO57_RS09025;old_locus_tag=CCO57_09015 NZ_NPMC01000004.1 Protein Homology CDS 365157 365888 . - 0 ID=cds-WP_000818972.1;Parent=gene-CCO57_RS09025;Dbxref=GenBank:WP_000818972.1;Name=WP_000818972.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=CCO57_RS09025;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818972.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 365900 366628 . - . ID=gene-CCO57_RS09030;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CCO57_RS09030;old_locus_tag=CCO57_09020 NZ_NPMC01000004.1 Protein Homology CDS 365900 366628 . - 0 ID=cds-WP_000399380.1;Parent=gene-CCO57_RS09030;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=CCO57_RS09030;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 366640 367545 . - . ID=gene-CCO57_RS09035;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CCO57_RS09035;old_locus_tag=CCO57_09025 NZ_NPMC01000004.1 Protein Homology CDS 366640 367545 . - 0 ID=cds-WP_000102230.1;Parent=gene-CCO57_RS09035;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=CCO57_RS09035;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 367542 368222 . - . ID=gene-CCO57_RS09040;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CCO57_RS09040;old_locus_tag=CCO57_09030 NZ_NPMC01000004.1 Protein Homology CDS 367542 368222 . - 0 ID=cds-WP_001068341.1;Parent=gene-CCO57_RS09040;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=CCO57_RS09040;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 368496 369470 . - . ID=gene-CCO57_RS09050;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CCO57_RS09050;old_locus_tag=CCO57_09040 NZ_NPMC01000004.1 Protein Homology CDS 368496 369470 . - 0 ID=cds-WP_000002559.1;Parent=gene-CCO57_RS09050;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=CCO57_RS09050;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 369487 371286 . - . ID=gene-CCO57_RS09055;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CCO57_RS09055;old_locus_tag=CCO57_09045 NZ_NPMC01000004.1 Protein Homology CDS 369487 371286 . - 0 ID=cds-WP_000790154.1;Parent=gene-CCO57_RS09055;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=CCO57_RS09055;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 371538 372017 . - . ID=gene-CCO57_RS09065;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=CCO57_RS09065;old_locus_tag=CCO57_09055 NZ_NPMC01000004.1 Protein Homology CDS 371538 372017 . - 0 ID=cds-WP_000589087.1;Parent=gene-CCO57_RS09065;Dbxref=GenBank:WP_000589087.1;Name=WP_000589087.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=CCO57_RS09065;product=SoxR-reducing system protein RseC;protein_id=WP_000589087.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 372014 372970 . - . ID=gene-CCO57_RS09070;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=CCO57_RS09070;old_locus_tag=CCO57_09060 NZ_NPMC01000004.1 Protein Homology CDS 372014 372970 . - 0 ID=cds-WP_000812019.1;Parent=gene-CCO57_RS09070;Dbxref=GenBank:WP_000812019.1;Name=WP_000812019.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=CCO57_RS09070;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812019.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 372970 373620 . - . ID=gene-CCO57_RS09075;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=CCO57_RS09075;old_locus_tag=CCO57_09065 NZ_NPMC01000004.1 Protein Homology CDS 372970 373620 . - 0 ID=cds-WP_001168374.1;Parent=gene-CCO57_RS09075;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=CCO57_RS09075;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 373652 374227 . - . ID=gene-CCO57_RS09080;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CCO57_RS09080;old_locus_tag=CCO57_09070 NZ_NPMC01000004.1 Protein Homology CDS 373652 374227 . - 0 ID=cds-WP_000003307.1;Parent=gene-CCO57_RS09080;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=CCO57_RS09080;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 374224 374388 . - . ID=gene-CCO57_RS24075;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=CCO57_RS24075 NZ_NPMC01000004.1 Protein Homology CDS 374224 374388 . - 0 ID=cds-WP_014344135.1;Parent=gene-CCO57_RS24075;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=CCO57_RS24075;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 374652 376274 . + . ID=gene-CCO57_RS09090;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CCO57_RS09090;old_locus_tag=CCO57_09080 NZ_NPMC01000004.1 Protein Homology CDS 374652 376274 . + 0 ID=cds-WP_086776819.1;Parent=gene-CCO57_RS09090;Dbxref=GenBank:WP_086776819.1;Name=WP_086776819.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=CCO57_RS09090;product=L-aspartate oxidase;protein_id=WP_086776819.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 376259 376996 . - . ID=gene-CCO57_RS09095;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=CCO57_RS09095;old_locus_tag=CCO57_09085 NZ_NPMC01000004.1 Protein Homology CDS 376259 376996 . - 0 ID=cds-WP_000083343.1;Parent=gene-CCO57_RS09095;Dbxref=GenBank:WP_000083343.1;Name=WP_000083343.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=CCO57_RS09095;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_000083343.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 377126 378460 . + . ID=gene-CCO57_RS09100;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=CCO57_RS09100;old_locus_tag=CCO57_09090 NZ_NPMC01000004.1 Protein Homology CDS 377126 378460 . + 0 ID=cds-WP_000219174.1;Parent=gene-CCO57_RS09100;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=CCO57_RS09100;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 378478 379377 . - . ID=gene-CCO57_RS09105;Name=CCO57_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09105;old_locus_tag=CCO57_09095 NZ_NPMC01000004.1 Protein Homology CDS 378478 379377 . - 0 ID=cds-WP_000365861.1;Parent=gene-CCO57_RS09105;Dbxref=GenBank:WP_000365861.1;Name=WP_000365861.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=CCO57_RS09105;product=LysR family transcriptional regulator;protein_id=WP_000365861.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 379480 380067 . + . ID=gene-CCO57_RS09110;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=CCO57_RS09110;old_locus_tag=CCO57_09100 NZ_NPMC01000004.1 Protein Homology CDS 379480 380067 . + 0 ID=cds-WP_000188416.1;Parent=gene-CCO57_RS09110;Dbxref=GenBank:WP_000188416.1;Name=WP_000188416.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=CCO57_RS09110;product=cysteine/O-acetylserine transporter;protein_id=WP_000188416.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 380129 380512 . - . ID=gene-CCO57_RS09115;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=CCO57_RS09115;old_locus_tag=CCO57_09105 NZ_NPMC01000004.1 Protein Homology CDS 380129 380512 . - 0 ID=cds-WP_000627811.1;Parent=gene-CCO57_RS09115;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=CCO57_RS09115;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 380831 381520 . + . ID=gene-CCO57_RS09120;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=CCO57_RS09120;old_locus_tag=CCO57_09110 NZ_NPMC01000004.1 Protein Homology CDS 380831 381520 . + 0 ID=cds-WP_000179978.1;Parent=gene-CCO57_RS09120;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=CCO57_RS09120;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 381636 382673 . - . ID=gene-CCO57_RS09125;Name=CCO57_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09125;old_locus_tag=CCO57_09115 NZ_NPMC01000004.1 Protein Homology CDS 381636 382673 . - 0 ID=cds-WP_000997366.1;Parent=gene-CCO57_RS09125;Dbxref=GenBank:WP_000997366.1;Name=WP_000997366.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=CCO57_RS09125;product=tRNA/rRNA methyltransferase;protein_id=WP_000997366.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 382877 383296 . + . ID=gene-CCO57_RS09135;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=CCO57_RS09135;old_locus_tag=CCO57_09125 NZ_NPMC01000004.1 Protein Homology CDS 382877 383296 . + 0 ID=cds-WP_001098732.1;Parent=gene-CCO57_RS09135;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=CCO57_RS09135;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 383369 384049 . + . ID=gene-CCO57_RS09140;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=CCO57_RS09140;old_locus_tag=CCO57_09130 NZ_NPMC01000004.1 Protein Homology CDS 383369 384049 . + 0 ID=cds-WP_000183642.1;Parent=gene-CCO57_RS09140;Dbxref=GenBank:WP_000183642.1;Name=WP_000183642.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=CCO57_RS09140;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000183642.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 384103 386763 . + . ID=gene-CCO57_RS09145;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=CCO57_RS09145;old_locus_tag=CCO57_09135 NZ_NPMC01000004.1 Protein Homology CDS 384103 386763 . + 0 ID=cds-WP_000082643.1;Parent=gene-CCO57_RS09145;Dbxref=GenBank:WP_000082643.1;Name=WP_000082643.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=CCO57_RS09145;product=protein lysine acetyltransferase;protein_id=WP_000082643.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 386878 388233 . + . ID=gene-CCO57_RS09150;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=CCO57_RS09150;old_locus_tag=CCO57_09140 NZ_NPMC01000004.1 Protein Homology CDS 386878 388233 . + 0 ID=cds-WP_079822196.1;Parent=gene-CCO57_RS09150;Dbxref=GenBank:WP_079822196.1;Name=WP_079822196.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=CCO57_RS09150;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_079822196.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 388278 388601 . + . ID=gene-CCO57_RS09155;Name=CCO57_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09155;old_locus_tag=CCO57_09145 NZ_NPMC01000004.1 Protein Homology CDS 388278 388601 . + 0 ID=cds-WP_001264473.1;Parent=gene-CCO57_RS09155;Dbxref=GenBank:WP_001264473.1;Name=WP_001264473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=CCO57_RS09155;product=YfiM family lipoprotein;protein_id=WP_001264473.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 388598 389899 . - . ID=gene-CCO57_RS09160;Name=CCO57_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09160;old_locus_tag=CCO57_09150 NZ_NPMC01000004.1 Protein Homology CDS 388598 389899 . - 0 ID=cds-WP_000807818.1;Parent=gene-CCO57_RS09160;Dbxref=GenBank:WP_000807818.1;Name=WP_000807818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=CCO57_RS09160;product=MFS transporter;protein_id=WP_000807818.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 390003 390458 . - . ID=gene-CCO57_RS09165;Name=CCO57_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09165;old_locus_tag=CCO57_09155 NZ_NPMC01000004.1 Protein Homology CDS 390003 390458 . - 0 ID=cds-WP_023232867.1;Parent=gene-CCO57_RS09165;Dbxref=GenBank:WP_023232867.1;Name=WP_023232867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=CCO57_RS09165;product=DUF4385 domain-containing protein;protein_id=WP_023232867.1;transl_table=11 NZ_NPMC01000004.1 RefSeq gene 390883 390998 . - . ID=gene-CCO57_RS09170;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO57_RS09170;old_locus_tag=CCO57_09160 NZ_NPMC01000004.1 cmsearch rRNA 390883 390998 . - . ID=rna-CCO57_RS09170;Parent=gene-CCO57_RS09170;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS09170;product=5S ribosomal RNA NZ_NPMC01000004.1 cmsearch exon 390883 390998 . - . ID=exon-CCO57_RS09170-1;Parent=rna-CCO57_RS09170;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS09170;product=5S ribosomal RNA NZ_NPMC01000004.1 RefSeq gene 391196 391298 . - . ID=gene-CCO57_RS09175;Name=CCO57_RS09175;end_range=391298,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS09175;old_locus_tag=CCO57_09165;partial=true NZ_NPMC01000004.1 cmsearch rRNA 391196 391298 . - . ID=rna-CCO57_RS09175;Parent=gene-CCO57_RS09175;Dbxref=RFAM:RF02541;end_range=391298,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS09175;partial=true;product=23S ribosomal RNA NZ_NPMC01000004.1 cmsearch exon 391196 391298 . - . ID=exon-CCO57_RS09175-1;Parent=rna-CCO57_RS09175;Dbxref=RFAM:RF02541;end_range=391298,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS09175;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPMC01000040.1 1 635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000040.1 RefSeq region 1 635 . + . ID=NZ_NPMC01000040.1:1..635;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000040.1 RefSeq pseudogene 75 519 . - . ID=gene-CCO57_RS23950;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=CCO57_RS23950;old_locus_tag=CCO57_23910;pseudo=true NZ_NPMC01000040.1 Protein Homology CDS 75 519 . - 0 ID=cds-CCO57_RS23950;Parent=gene-CCO57_RS23950;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=CCO57_RS23950;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_NPMC01000041.1 1 617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000041.1 RefSeq region 1 617 . + . ID=NZ_NPMC01000041.1:1..617;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000041.1 RefSeq gene 1 617 . + . ID=gene-CCO57_RS23955;Name=CCO57_RS23955;end_range=617,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS23955;old_locus_tag=CCO57_23915;partial=true;start_range=.,1 NZ_NPMC01000041.1 cmsearch rRNA 1 617 . + . ID=rna-CCO57_RS23955;Parent=gene-CCO57_RS23955;Dbxref=RFAM:RF02541;end_range=617,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23955;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMC01000041.1 cmsearch exon 1 617 . + . ID=exon-CCO57_RS23955-1;Parent=rna-CCO57_RS23955;Dbxref=RFAM:RF02541;end_range=617,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23955;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPMC01000042.1 1 606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000042.1 RefSeq region 1 606 . + . ID=NZ_NPMC01000042.1:1..606;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000042.1 RefSeq gene 1 104 . - . ID=gene-CCO57_RS23960;Name=CCO57_RS23960;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS23960;old_locus_tag=CCO57_23920;partial=true;start_range=.,1 NZ_NPMC01000042.1 cmsearch rRNA 1 104 . - . ID=rna-CCO57_RS23960;Parent=gene-CCO57_RS23960;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23960;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMC01000042.1 cmsearch exon 1 104 . - . ID=exon-CCO57_RS23960-1;Parent=rna-CCO57_RS23960;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23960;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMC01000042.1 RefSeq gene 287 362 . - . ID=gene-CCO57_RS23965;Name=CCO57_RS23965;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS23965;old_locus_tag=CCO57_23925 NZ_NPMC01000042.1 tRNAscan-SE tRNA 287 362 . - . ID=rna-CCO57_RS23965;Parent=gene-CCO57_RS23965;anticodon=(pos:complement(327..329));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23965;product=tRNA-Ala NZ_NPMC01000042.1 tRNAscan-SE exon 287 362 . - . ID=exon-CCO57_RS23965-1;Parent=rna-CCO57_RS23965;anticodon=(pos:complement(327..329));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23965;product=tRNA-Ala NZ_NPMC01000042.1 RefSeq gene 472 548 . - . ID=gene-CCO57_RS23970;Name=CCO57_RS23970;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS23970;old_locus_tag=CCO57_23930 NZ_NPMC01000042.1 tRNAscan-SE tRNA 472 548 . - . ID=rna-CCO57_RS23970;Parent=gene-CCO57_RS23970;anticodon=(pos:complement(512..514));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23970;product=tRNA-Ile NZ_NPMC01000042.1 tRNAscan-SE exon 472 548 . - . ID=exon-CCO57_RS23970-1;Parent=rna-CCO57_RS23970;anticodon=(pos:complement(512..514));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23970;product=tRNA-Ile ##sequence-region NZ_NPMC01000043.1 1 582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000043.1 RefSeq region 1 582 . + . ID=NZ_NPMC01000043.1:1..582;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000043.1 RefSeq gene 1 104 . - . ID=gene-CCO57_RS23975;Name=CCO57_RS23975;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS23975;old_locus_tag=CCO57_23935;partial=true;start_range=.,1 NZ_NPMC01000043.1 cmsearch rRNA 1 104 . - . ID=rna-CCO57_RS23975;Parent=gene-CCO57_RS23975;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23975;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMC01000043.1 cmsearch exon 1 104 . - . ID=exon-CCO57_RS23975-1;Parent=rna-CCO57_RS23975;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23975;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMC01000043.1 RefSeq gene 298 373 . - . ID=gene-CCO57_RS23980;Name=CCO57_RS23980;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS23980;old_locus_tag=CCO57_23940 NZ_NPMC01000043.1 tRNAscan-SE tRNA 298 373 . - . ID=rna-CCO57_RS23980;Parent=gene-CCO57_RS23980;anticodon=(pos:complement(337..339));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23980;product=tRNA-Glu NZ_NPMC01000043.1 tRNAscan-SE exon 298 373 . - . ID=exon-CCO57_RS23980-1;Parent=rna-CCO57_RS23980;anticodon=(pos:complement(337..339));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS23980;product=tRNA-Glu NZ_NPMC01000043.1 RefSeq gene 459 582 . - . ID=gene-CCO57_RS23985;Name=CCO57_RS23985;end_range=582,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS23985;old_locus_tag=CCO57_23945;partial=true NZ_NPMC01000043.1 cmsearch rRNA 459 582 . - . ID=rna-CCO57_RS23985;Parent=gene-CCO57_RS23985;Dbxref=RFAM:RF00177;end_range=582,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23985;partial=true;product=16S ribosomal RNA NZ_NPMC01000043.1 cmsearch exon 459 582 . - . ID=exon-CCO57_RS23985-1;Parent=rna-CCO57_RS23985;Dbxref=RFAM:RF00177;end_range=582,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23985;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPMC01000044.1 1 563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000044.1 RefSeq region 1 563 . + . ID=NZ_NPMC01000044.1:1..563;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000044.1 RefSeq gene 24 563 . + . ID=gene-CCO57_RS23990;Name=CCO57_RS23990;end_range=563,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS23990;old_locus_tag=CCO57_23950;partial=true NZ_NPMC01000044.1 cmsearch rRNA 24 563 . + . ID=rna-CCO57_RS23990;Parent=gene-CCO57_RS23990;Dbxref=RFAM:RF02541;end_range=563,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23990;partial=true;product=23S ribosomal RNA NZ_NPMC01000044.1 cmsearch exon 24 563 . + . ID=exon-CCO57_RS23990-1;Parent=rna-CCO57_RS23990;Dbxref=RFAM:RF02541;end_range=563,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23990;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPMC01000045.1 1 534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000045.1 RefSeq region 1 534 . + . ID=NZ_NPMC01000045.1:1..534;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000045.1 RefSeq gene 1 534 . - . ID=gene-CCO57_RS23995;Name=CCO57_RS23995;end_range=534,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO57_RS23995;old_locus_tag=CCO57_23955;partial=true;start_range=.,1 NZ_NPMC01000045.1 cmsearch rRNA 1 534 . - . ID=rna-CCO57_RS23995;Parent=gene-CCO57_RS23995;Dbxref=RFAM:RF02541;end_range=534,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23995;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMC01000045.1 cmsearch exon 1 534 . - . ID=exon-CCO57_RS23995-1;Parent=rna-CCO57_RS23995;Dbxref=RFAM:RF02541;end_range=534,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS23995;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPMC01000046.1 1 512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000046.1 RefSeq region 1 512 . + . ID=NZ_NPMC01000046.1:1..512;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000046.1 RefSeq gene 1 512 . + . ID=gene-CCO57_RS24000;Name=CCO57_RS24000;end_range=512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24000;old_locus_tag=CCO57_23960;partial=true;start_range=.,1 NZ_NPMC01000046.1 Protein Homology CDS 1 512 . + 0 ID=cds-WP_176453490.1;Parent=gene-CCO57_RS24000;Dbxref=GenBank:WP_176453490.1;Name=WP_176453490.1;end_range=512,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092509.1;locus_tag=CCO57_RS24000;partial=true;product=CS1-pili formation C-terminal domain-containing protein;protein_id=WP_176453490.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPMC01000005.1 1 340932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000005.1 RefSeq region 1 340932 . + . ID=NZ_NPMC01000005.1:1..340932;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000005.1 RefSeq gene 165 1496 . - . ID=gene-CCO57_RS09185;Name=CCO57_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09185;old_locus_tag=CCO57_09175 NZ_NPMC01000005.1 Protein Homology CDS 165 1496 . - 0 ID=cds-WP_023207758.1;Parent=gene-CCO57_RS09185;Dbxref=GenBank:WP_023207758.1;Name=WP_023207758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416853.1;locus_tag=CCO57_RS09185;product=hypothetical protein;protein_id=WP_023207758.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 1493 2413 . - . ID=gene-CCO57_RS09190;Name=CCO57_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09190;old_locus_tag=CCO57_09180 NZ_NPMC01000005.1 Protein Homology CDS 1493 2413 . - 0 ID=cds-WP_001642935.1;Parent=gene-CCO57_RS09190;Dbxref=GenBank:WP_001642935.1;Name=WP_001642935.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416852.1;locus_tag=CCO57_RS09190;product=glycosyltransferase family 2 protein;protein_id=WP_001642935.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 2410 2772 . - . ID=gene-CCO57_RS09195;Name=CCO57_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09195;old_locus_tag=CCO57_09185 NZ_NPMC01000005.1 Protein Homology CDS 2410 2772 . - 0 ID=cds-WP_023253953.1;Parent=gene-CCO57_RS09195;Dbxref=GenBank:WP_023253953.1;Name=WP_023253953.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=CCO57_RS09195;product=GtrA family protein;protein_id=WP_023253953.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 3195 3440 . - . ID=gene-CCO57_RS09200;Name=CCO57_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09200;old_locus_tag=CCO57_09190 NZ_NPMC01000005.1 GeneMarkS-2+ CDS 3195 3440 . - 0 ID=cds-WP_001642936.1;Parent=gene-CCO57_RS09200;Dbxref=GenBank:WP_001642936.1;Name=WP_001642936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS09200;product=hypothetical protein;protein_id=WP_001642936.1;transl_table=11 NZ_NPMC01000005.1 RefSeq pseudogene 3640 4017 . - . ID=gene-CCO57_RS09205;Name=CCO57_RS09205;end_range=4017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS09205;old_locus_tag=CCO57_09195;partial=true;pseudo=true NZ_NPMC01000005.1 Protein Homology CDS 3640 4017 . - 0 ID=cds-CCO57_RS09205;Parent=gene-CCO57_RS09205;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=CCO57_RS09205;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_NPMC01000005.1 RefSeq pseudogene 4018 4284 . + . ID=gene-CCO57_RS09210;Name=CCO57_RS09210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS09210;old_locus_tag=CCO57_09200;partial=true;pseudo=true;start_range=.,4018 NZ_NPMC01000005.1 Protein Homology CDS 4018 4284 . + 0 ID=cds-CCO57_RS09210;Parent=gene-CCO57_RS09210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=CCO57_RS09210;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,4018;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 4335 5189 . - . ID=gene-CCO57_RS09215;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=CCO57_RS09215;old_locus_tag=CCO57_09205 NZ_NPMC01000005.1 Protein Homology CDS 4335 5189 . - 0 ID=cds-WP_000339627.1;Parent=gene-CCO57_RS09215;Dbxref=GenBank:WP_000339627.1;Name=WP_000339627.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=CCO57_RS09215;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339627.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 5405 6730 . + . ID=gene-CCO57_RS09220;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=CCO57_RS09220;old_locus_tag=CCO57_09210 NZ_NPMC01000005.1 Protein Homology CDS 5405 6730 . + 0 ID=cds-WP_023212918.1;Parent=gene-CCO57_RS09220;Dbxref=GenBank:WP_023212918.1;Name=WP_023212918.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=CCO57_RS09220;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_023212918.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 6887 7123 . + . ID=gene-CCO57_RS09225;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=CCO57_RS09225;old_locus_tag=CCO57_09215 NZ_NPMC01000005.1 Protein Homology CDS 6887 7123 . + 0 ID=cds-WP_001642942.1;Parent=gene-CCO57_RS09225;Dbxref=GenBank:WP_001642942.1;Name=WP_001642942.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=CCO57_RS09225;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_001642942.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 7136 7696 . + . ID=gene-CCO57_RS09230;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=CCO57_RS09230;old_locus_tag=CCO57_09220 NZ_NPMC01000005.1 Protein Homology CDS 7136 7696 . + 0 ID=cds-WP_000362177.1;Parent=gene-CCO57_RS09230;Dbxref=GenBank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=CCO57_RS09230;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 7775 8950 . - . ID=gene-CCO57_RS09235;Name=CCO57_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09235;old_locus_tag=CCO57_09225 NZ_NPMC01000005.1 Protein Homology CDS 7775 8950 . - 0 ID=cds-WP_001033457.1;Parent=gene-CCO57_RS09235;Dbxref=GenBank:WP_001033457.1;Name=WP_001033457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=CCO57_RS09235;product=DnaJ family molecular chaperone;protein_id=WP_001033457.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 9276 10670 . + . ID=gene-CCO57_RS09240;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=CCO57_RS09240;old_locus_tag=CCO57_09230 NZ_NPMC01000005.1 Protein Homology CDS 9276 10670 . + 0 ID=cds-WP_000786283.1;Parent=gene-CCO57_RS09240;Dbxref=GenBank:WP_000786283.1;Name=WP_000786283.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=CCO57_RS09240;product=phenylalanine transporter;protein_id=WP_000786283.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 10712 11959 . - . ID=gene-CCO57_RS09245;Name=CCO57_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09245;old_locus_tag=CCO57_09235 NZ_NPMC01000005.1 Protein Homology CDS 10712 11959 . - 0 ID=cds-WP_001156971.1;Parent=gene-CCO57_RS09245;Dbxref=GenBank:WP_001156971.1;Name=WP_001156971.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=CCO57_RS09245;product=mechanosensitive ion channel family protein;protein_id=WP_001156971.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 12270 14240 . + . ID=gene-CCO57_RS09255;Name=CCO57_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09255;old_locus_tag=CCO57_09245 NZ_NPMC01000005.1 Protein Homology CDS 12270 14240 . + 0 ID=cds-WP_023137265.1;Parent=gene-CCO57_RS09255;Dbxref=GenBank:WP_023137265.1;Name=WP_023137265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=CCO57_RS09255;product=autotransporter domain-containing esterase;protein_id=WP_023137265.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 14507 15160 . - . ID=gene-CCO57_RS09260;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=CCO57_RS09260;old_locus_tag=CCO57_09250 NZ_NPMC01000005.1 Protein Homology CDS 14507 15160 . - 0 ID=cds-WP_094914906.1;Parent=gene-CCO57_RS09260;Dbxref=GenBank:WP_094914906.1;Name=WP_094914906.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=CCO57_RS09260;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_094914906.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 15257 15625 . - . ID=gene-CCO57_RS09265;Name=CCO57_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09265;old_locus_tag=CCO57_09255 NZ_NPMC01000005.1 Protein Homology CDS 15257 15625 . - 0 ID=cds-WP_001642947.1;Parent=gene-CCO57_RS09265;Dbxref=GenBank:WP_001642947.1;Name=WP_001642947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=CCO57_RS09265;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_001642947.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 15625 16206 . - . ID=gene-CCO57_RS09270;Name=CCO57_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09270;old_locus_tag=CCO57_09260 NZ_NPMC01000005.1 Protein Homology CDS 15625 16206 . - 0 ID=cds-WP_094914907.1;Parent=gene-CCO57_RS09270;Dbxref=GenBank:WP_094914907.1;Name=WP_094914907.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=CCO57_RS09270;product=TetR/AcrR family transcriptional regulator;protein_id=WP_094914907.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 16495 16836 . + . ID=gene-CCO57_RS09275;Name=CCO57_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09275;old_locus_tag=CCO57_09265 NZ_NPMC01000005.1 Protein Homology CDS 16495 16836 . + 0 ID=cds-WP_000155635.1;Parent=gene-CCO57_RS09275;Dbxref=GenBank:WP_000155635.1;Name=WP_000155635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=CCO57_RS09275;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155635.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 16842 17090 . - . ID=gene-CCO57_RS09280;Name=CCO57_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09280;old_locus_tag=CCO57_09270 NZ_NPMC01000005.1 Protein Homology CDS 16842 17090 . - 0 ID=cds-WP_000682497.1;Parent=gene-CCO57_RS09280;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=CCO57_RS09280;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 17157 18275 . - . ID=gene-CCO57_RS09285;Name=CCO57_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09285;old_locus_tag=CCO57_09275 NZ_NPMC01000005.1 Protein Homology CDS 17157 18275 . - 0 ID=cds-WP_001529047.1;Parent=gene-CCO57_RS09285;Dbxref=GenBank:WP_001529047.1;Name=WP_001529047.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=CCO57_RS09285;product=YbdK family carboxylate-amine ligase;protein_id=WP_001529047.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 18287 18991 . - . ID=gene-CCO57_RS09290;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=CCO57_RS09290;old_locus_tag=CCO57_09280 NZ_NPMC01000005.1 Protein Homology CDS 18287 18991 . - 0 ID=cds-WP_023137264.1;Parent=gene-CCO57_RS09290;Dbxref=GenBank:WP_023137264.1;Name=WP_023137264.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=CCO57_RS09290;product=enterobactin synthase subunit EntD;protein_id=WP_023137264.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 19039 21294 . - . ID=gene-CCO57_RS09295;Name=CCO57_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09295;old_locus_tag=CCO57_09285 NZ_NPMC01000005.1 Protein Homology CDS 19039 21294 . - 0 ID=cds-WP_001034966.1;Parent=gene-CCO57_RS09295;Dbxref=GenBank:WP_001034966.1;Name=WP_001034966.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=CCO57_RS09295;product=TonB-dependent siderophore receptor;protein_id=WP_001034966.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 21483 22697 . + . ID=gene-CCO57_RS09300;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=CCO57_RS09300;old_locus_tag=CCO57_09290 NZ_NPMC01000005.1 Protein Homology CDS 21483 22697 . + 0 ID=cds-WP_023137263.1;Parent=gene-CCO57_RS09300;Dbxref=GenBank:WP_023137263.1;Name=WP_023137263.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=CCO57_RS09300;product=enterochelin esterase;protein_id=WP_023137263.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 22728 22946 . + . ID=gene-CCO57_RS09305;Name=CCO57_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09305;old_locus_tag=CCO57_09295 NZ_NPMC01000005.1 Protein Homology CDS 22728 22946 . + 0 ID=cds-WP_001529054.1;Parent=gene-CCO57_RS09305;Dbxref=GenBank:WP_001529054.1;Name=WP_001529054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=CCO57_RS09305;product=MbtH family protein;protein_id=WP_001529054.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 22943 26827 . + . ID=gene-CCO57_RS09310;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=CCO57_RS09310;old_locus_tag=CCO57_09300 NZ_NPMC01000005.1 Protein Homology CDS 22943 26827 . + 0 ID=cds-WP_094914908.1;Parent=gene-CCO57_RS09310;Dbxref=GenBank:WP_094914908.1;Name=WP_094914908.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=CCO57_RS09310;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_094914908.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 27077 28213 . + . ID=gene-CCO57_RS09315;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=CCO57_RS09315;old_locus_tag=CCO57_09305 NZ_NPMC01000005.1 Protein Homology CDS 27077 28213 . + 0 ID=cds-WP_001529067.1;Parent=gene-CCO57_RS09315;Dbxref=GenBank:WP_001529067.1;Name=WP_001529067.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=CCO57_RS09315;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_001529067.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 28267 29061 . - . ID=gene-CCO57_RS09320;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=CCO57_RS09320;old_locus_tag=CCO57_09310 NZ_NPMC01000005.1 Protein Homology CDS 28267 29061 . - 0 ID=cds-WP_000140623.1;Parent=gene-CCO57_RS09320;Dbxref=GenBank:WP_000140623.1;Name=WP_000140623.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=CCO57_RS09320;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140623.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 29058 30047 . - . ID=gene-CCO57_RS09325;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=CCO57_RS09325;old_locus_tag=CCO57_09315 NZ_NPMC01000005.1 Protein Homology CDS 29058 30047 . - 0 ID=cds-WP_000480068.1;Parent=gene-CCO57_RS09325;Dbxref=GenBank:WP_000480068.1;Name=WP_000480068.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=CCO57_RS09325;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480068.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 30047 31054 . - . ID=gene-CCO57_RS09330;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=CCO57_RS09330;old_locus_tag=CCO57_09320 NZ_NPMC01000005.1 Protein Homology CDS 30047 31054 . - 0 ID=cds-WP_001277879.1;Parent=gene-CCO57_RS09330;Dbxref=GenBank:WP_001277879.1;Name=WP_001277879.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=CCO57_RS09330;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277879.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 31164 32408 . + . ID=gene-CCO57_RS09335;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=CCO57_RS09335;old_locus_tag=CCO57_09325 NZ_NPMC01000005.1 Protein Homology CDS 31164 32408 . + 0 ID=cds-WP_001081661.1;Parent=gene-CCO57_RS09335;Dbxref=GenBank:WP_001081661.1;Name=WP_001081661.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=CCO57_RS09335;product=enterobactin transporter EntS;protein_id=WP_001081661.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 32471 33427 . - . ID=gene-CCO57_RS09340;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=CCO57_RS09340;old_locus_tag=CCO57_09330 NZ_NPMC01000005.1 Protein Homology CDS 32471 33427 . - 0 ID=cds-WP_023215207.1;Parent=gene-CCO57_RS09340;Dbxref=GenBank:WP_023215207.1;Name=WP_023215207.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=CCO57_RS09340;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_023215207.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 33736 34911 . + . ID=gene-CCO57_RS09345;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=CCO57_RS09345;old_locus_tag=CCO57_09335 NZ_NPMC01000005.1 Protein Homology CDS 33736 34911 . + 0 ID=cds-WP_000367597.1;Parent=gene-CCO57_RS09345;Dbxref=GenBank:WP_000367597.1;Name=WP_000367597.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=CCO57_RS09345;product=isochorismate synthase EntC;protein_id=WP_000367597.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 34921 36531 . + . ID=gene-CCO57_RS09350;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=CCO57_RS09350;old_locus_tag=CCO57_09340 NZ_NPMC01000005.1 Protein Homology CDS 34921 36531 . + 0 ID=cds-WP_001222461.1;Parent=gene-CCO57_RS09350;Dbxref=GenBank:WP_001222461.1;Name=WP_001222461.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=CCO57_RS09350;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_001222461.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 36545 37402 . + . ID=gene-CCO57_RS09355;Name=CCO57_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09355;old_locus_tag=CCO57_09345 NZ_NPMC01000005.1 Protein Homology CDS 36545 37402 . + 0 ID=cds-WP_001007166.1;Parent=gene-CCO57_RS09355;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=CCO57_RS09355;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 37402 38157 . + . ID=gene-CCO57_RS09360;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=CCO57_RS09360;old_locus_tag=CCO57_09350 NZ_NPMC01000005.1 Protein Homology CDS 37402 38157 . + 0 ID=cds-WP_079982302.1;Parent=gene-CCO57_RS09360;Dbxref=GenBank:WP_079982302.1;Name=WP_079982302.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=CCO57_RS09360;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_079982302.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 38160 38573 . + . ID=gene-CCO57_RS09365;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=CCO57_RS09365;old_locus_tag=CCO57_09355 NZ_NPMC01000005.1 Protein Homology CDS 38160 38573 . + 0 ID=cds-WP_000637966.1;Parent=gene-CCO57_RS09365;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=CCO57_RS09365;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 38755 40860 . + . ID=gene-CCO57_RS09370;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=CCO57_RS09370;old_locus_tag=CCO57_09360 NZ_NPMC01000005.1 Protein Homology CDS 38755 40860 . + 0 ID=cds-WP_001043108.1;Parent=gene-CCO57_RS09370;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=CCO57_RS09370;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 40924 41121 . + . ID=gene-CCO57_RS09375;Name=CCO57_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09375;old_locus_tag=CCO57_09365 NZ_NPMC01000005.1 Protein Homology CDS 40924 41121 . + 0 ID=cds-WP_000460619.1;Parent=gene-CCO57_RS09375;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=CCO57_RS09375;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 41157 42245 . - . ID=gene-CCO57_RS09380;Name=CCO57_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09380;old_locus_tag=CCO57_09370 NZ_NPMC01000005.1 Protein Homology CDS 41157 42245 . - 0 ID=cds-WP_094888225.1;Parent=gene-CCO57_RS09380;Dbxref=GenBank:WP_094888225.1;Name=WP_094888225.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=CCO57_RS09380;product=oxidoreductase;protein_id=WP_094888225.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 42372 43532 . + . ID=gene-CCO57_RS09385;Name=CCO57_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09385;old_locus_tag=CCO57_09375 NZ_NPMC01000005.1 Protein Homology CDS 42372 43532 . + 0 ID=cds-WP_094914909.1;Parent=gene-CCO57_RS09385;Dbxref=GenBank:WP_094914909.1;Name=WP_094914909.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=CCO57_RS09385;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_094914909.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 43533 44150 . - . ID=gene-CCO57_RS09390;Name=CCO57_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09390;old_locus_tag=CCO57_09380 NZ_NPMC01000005.1 Protein Homology CDS 43533 44150 . - 0 ID=cds-WP_001164754.1;Parent=gene-CCO57_RS09390;Dbxref=GenBank:WP_001164754.1;Name=WP_001164754.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=CCO57_RS09390;product=IbrB-like domain-containing protein;protein_id=WP_001164754.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 44123 45358 . - . ID=gene-CCO57_RS09395;Name=CCO57_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09395;old_locus_tag=CCO57_09385 NZ_NPMC01000005.1 Protein Homology CDS 44123 45358 . - 0 ID=cds-WP_000118134.1;Parent=gene-CCO57_RS09395;Dbxref=GenBank:WP_000118134.1;Name=WP_000118134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=CCO57_RS09395;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118134.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 45521 46426 . - . ID=gene-CCO57_RS09400;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;locus_tag=CCO57_RS09400;old_locus_tag=CCO57_09390 NZ_NPMC01000005.1 Protein Homology CDS 45521 46426 . - 0 ID=cds-WP_000002494.1;Parent=gene-CCO57_RS09400;Dbxref=GenBank:WP_000002494.1;Name=WP_000002494.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002494.1;locus_tag=CCO57_RS09400;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002494.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 46743 47489 . - . ID=gene-CCO57_RS09410;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=CCO57_RS09410;old_locus_tag=CCO57_09400 NZ_NPMC01000005.1 Protein Homology CDS 46743 47489 . - 0 ID=cds-WP_000597129.1;Parent=gene-CCO57_RS09410;Dbxref=GenBank:WP_000597129.1;Name=WP_000597129.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=CCO57_RS09410;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597129.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 47930 48493 . + . ID=gene-CCO57_RS09415;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CCO57_RS09415;old_locus_tag=CCO57_09405 NZ_NPMC01000005.1 Protein Homology CDS 47930 48493 . + 0 ID=cds-WP_000052802.1;Parent=gene-CCO57_RS09415;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=CCO57_RS09415;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 48735 50300 . + . ID=gene-CCO57_RS09420;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CCO57_RS09420;old_locus_tag=CCO57_09410 NZ_NPMC01000005.1 Protein Homology CDS 48735 50300 . + 0 ID=cds-WP_000887644.1;Parent=gene-CCO57_RS09420;Dbxref=GenBank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=CCO57_RS09420;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 50632 51192 . + . ID=gene-CCO57_RS09425;Name=CCO57_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09425;old_locus_tag=CCO57_09415 NZ_NPMC01000005.1 Protein Homology CDS 50632 51192 . + 0 ID=cds-WP_000377439.1;Parent=gene-CCO57_RS09425;Dbxref=GenBank:WP_000377439.1;Name=WP_000377439.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=CCO57_RS09425;product=TorD/DmsD family molecular chaperone;protein_id=WP_000377439.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 51185 53464 . + . ID=gene-CCO57_RS09430;Name=CCO57_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09430;old_locus_tag=CCO57_09420 NZ_NPMC01000005.1 Protein Homology CDS 51185 53464 . + 0 ID=cds-WP_094914910.1;Parent=gene-CCO57_RS09430;Dbxref=GenBank:WP_094914910.1;Name=WP_094914910.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=CCO57_RS09430;product=molybdopterin-dependent oxidoreductase;protein_id=WP_094914910.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 53461 54018 . + . ID=gene-CCO57_RS09435;Name=CCO57_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09435;old_locus_tag=CCO57_09425 NZ_NPMC01000005.1 Protein Homology CDS 53461 54018 . + 0 ID=cds-WP_001250387.1;Parent=gene-CCO57_RS09435;Dbxref=GenBank:WP_001250387.1;Name=WP_001250387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=CCO57_RS09435;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250387.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 54018 54785 . + . ID=gene-CCO57_RS09440;Name=CCO57_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09440;old_locus_tag=CCO57_09430 NZ_NPMC01000005.1 Protein Homology CDS 54018 54785 . + 0 ID=cds-WP_000417106.1;Parent=gene-CCO57_RS09440;Dbxref=GenBank:WP_000417106.1;Name=WP_000417106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=CCO57_RS09440;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417106.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 54853 55281 . - . ID=gene-CCO57_RS09445;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=CCO57_RS09445;old_locus_tag=CCO57_09435 NZ_NPMC01000005.1 Protein Homology CDS 54853 55281 . - 0 ID=cds-WP_000278499.1;Parent=gene-CCO57_RS09445;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=CCO57_RS09445;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 55503 56741 . + . ID=gene-CCO57_RS09455;Name=CCO57_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09455;old_locus_tag=CCO57_09445 NZ_NPMC01000005.1 Protein Homology CDS 55503 56741 . + 0 ID=cds-WP_000646115.1;Parent=gene-CCO57_RS09455;Dbxref=GenBank:WP_000646115.1;Name=WP_000646115.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=CCO57_RS09455;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646115.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 56826 57236 . - . ID=gene-CCO57_RS09460;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=CCO57_RS09460;old_locus_tag=CCO57_09450 NZ_NPMC01000005.1 Protein Homology CDS 56826 57236 . - 0 ID=cds-WP_000089748.1;Parent=gene-CCO57_RS09460;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=CCO57_RS09460;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 57471 58277 . - . ID=gene-CCO57_RS09470;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=CCO57_RS09470;old_locus_tag=CCO57_09460 NZ_NPMC01000005.1 Protein Homology CDS 57471 58277 . - 0 ID=cds-WP_094914911.1;Parent=gene-CCO57_RS09470;Dbxref=GenBank:WP_094914911.1;Name=WP_094914911.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=CCO57_RS09470;product=ribonuclease I;protein_id=WP_094914911.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 58387 59850 . - . ID=gene-CCO57_RS09475;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=CCO57_RS09475;old_locus_tag=CCO57_09465 NZ_NPMC01000005.1 Protein Homology CDS 58387 59850 . - 0 ID=cds-WP_000059039.1;Parent=gene-CCO57_RS09475;Dbxref=GenBank:WP_000059039.1;Name=WP_000059039.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=CCO57_RS09475;product=citrate/succinate antiporter CitT;protein_id=WP_000059039.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 59888 60784 . - . ID=gene-CCO57_RS09480;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO57_RS09480;old_locus_tag=CCO57_09470 NZ_NPMC01000005.1 Protein Homology CDS 59888 60784 . - 0 ID=cds-WP_000982668.1;Parent=gene-CCO57_RS09480;Dbxref=GenBank:WP_000982668.1;Name=WP_000982668.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=CCO57_RS09480;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982668.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 60756 61307 . - . ID=gene-CCO57_RS09485;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO57_RS09485;old_locus_tag=CCO57_09475 NZ_NPMC01000005.1 Protein Homology CDS 60756 61307 . - 0 ID=cds-WP_094914912.1;Parent=gene-CCO57_RS09485;Dbxref=GenBank:WP_094914912.1;Name=WP_094914912.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=CCO57_RS09485;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_094914912.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 61311 62840 . - . ID=gene-CCO57_RS09490;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO57_RS09490;old_locus_tag=CCO57_09480 NZ_NPMC01000005.1 Protein Homology CDS 61311 62840 . - 0 ID=cds-WP_000192323.1;Parent=gene-CCO57_RS09490;Dbxref=GenBank:WP_000192323.1;Name=WP_000192323.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=CCO57_RS09490;product=citrate lyase subunit alpha;protein_id=WP_000192323.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 62850 63758 . - . ID=gene-CCO57_RS09495;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO57_RS09495;old_locus_tag=CCO57_09485 NZ_NPMC01000005.1 Protein Homology CDS 62850 63758 . - 0 ID=cds-WP_000622342.1;Parent=gene-CCO57_RS09495;Dbxref=GenBank:WP_000622342.1;Name=WP_000622342.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=CCO57_RS09495;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622342.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 63755 64051 . - . ID=gene-CCO57_RS09500;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO57_RS09500;old_locus_tag=CCO57_09490 NZ_NPMC01000005.1 Protein Homology CDS 63755 64051 . - 0 ID=cds-WP_000700685.1;Parent=gene-CCO57_RS09500;Dbxref=GenBank:WP_000700685.1;Name=WP_000700685.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=CCO57_RS09500;product=citrate lyase acyl carrier protein;protein_id=WP_000700685.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 64048 65124 . - . ID=gene-CCO57_RS09505;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO57_RS09505;old_locus_tag=CCO57_09495 NZ_NPMC01000005.1 Protein Homology CDS 64048 65124 . - 0 ID=cds-WP_000467874.1;Parent=gene-CCO57_RS09505;Dbxref=GenBank:WP_000467874.1;Name=WP_000467874.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=CCO57_RS09505;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467874.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 65510 67171 . + . ID=gene-CCO57_RS09515;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=CCO57_RS09515;old_locus_tag=CCO57_09505 NZ_NPMC01000005.1 Protein Homology CDS 65510 67171 . + 0 ID=cds-WP_000121807.1;Parent=gene-CCO57_RS09515;Dbxref=GenBank:WP_000121807.1;Name=WP_000121807.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=CCO57_RS09515;product=sensor histidine kinase DpiB;protein_id=WP_000121807.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 67140 67820 . + . ID=gene-CCO57_RS09520;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=CCO57_RS09520;old_locus_tag=CCO57_09510 NZ_NPMC01000005.1 Protein Homology CDS 67140 67820 . + 0 ID=cds-WP_000138778.1;Parent=gene-CCO57_RS09520;Dbxref=GenBank:WP_000138778.1;Name=WP_000138778.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=CCO57_RS09520;product=two-component response regulator DpiA;protein_id=WP_000138778.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 67874 69259 . - . ID=gene-CCO57_RS09525;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=CCO57_RS09525;old_locus_tag=CCO57_09515 NZ_NPMC01000005.1 Protein Homology CDS 67874 69259 . - 0 ID=cds-WP_000958619.1;Parent=gene-CCO57_RS09525;Dbxref=GenBank:WP_000958619.1;Name=WP_000958619.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=CCO57_RS09525;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000958619.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 69638 70210 . + . ID=gene-CCO57_RS09535;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=CCO57_RS09535;old_locus_tag=CCO57_09525 NZ_NPMC01000005.1 Protein Homology CDS 69638 70210 . + 0 ID=cds-WP_001623090.1;Parent=gene-CCO57_RS09535;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=CCO57_RS09535;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 70398 70607 . + . ID=gene-CCO57_RS09540;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO57_RS09540;old_locus_tag=CCO57_09530 NZ_NPMC01000005.1 Protein Homology CDS 70398 70607 . + 0 ID=cds-WP_000034826.1;Parent=gene-CCO57_RS09540;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=CCO57_RS09540;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 70666 71049 . - . ID=gene-CCO57_RS09545;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CCO57_RS09545;old_locus_tag=CCO57_09535 NZ_NPMC01000005.1 Protein Homology CDS 70666 71049 . - 0 ID=cds-WP_000939753.1;Parent=gene-CCO57_RS09545;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=CCO57_RS09545;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 71140 71928 . + . ID=gene-CCO57_RS09550;Name=CCO57_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09550;old_locus_tag=CCO57_09540 NZ_NPMC01000005.1 Protein Homology CDS 71140 71928 . + 0 ID=cds-WP_000495793.1;Parent=gene-CCO57_RS09550;Dbxref=GenBank:WP_000495793.1;Name=WP_000495793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=CCO57_RS09550;product=deaminated glutathione amidase;protein_id=WP_000495793.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 72057 72260 . + . ID=gene-CCO57_RS09555;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=CCO57_RS09555;old_locus_tag=CCO57_09545 NZ_NPMC01000005.1 Protein Homology CDS 72057 72260 . + 0 ID=cds-WP_000503938.1;Parent=gene-CCO57_RS09555;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=CCO57_RS09555;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 72346 73311 . - . ID=gene-CCO57_RS09560;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CCO57_RS09560;old_locus_tag=CCO57_09550 NZ_NPMC01000005.1 Protein Homology CDS 72346 73311 . - 0 ID=cds-WP_000042640.1;Parent=gene-CCO57_RS09560;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=CCO57_RS09560;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 73517 74470 . - . ID=gene-CCO57_RS09565;Name=CCO57_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09565;old_locus_tag=CCO57_09555 NZ_NPMC01000005.1 Protein Homology CDS 73517 74470 . - 0 ID=cds-WP_001282817.1;Parent=gene-CCO57_RS09565;Dbxref=GenBank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=CCO57_RS09565;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 74772 75413 . - . ID=gene-CCO57_RS09570;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=CCO57_RS09570;old_locus_tag=CCO57_09560 NZ_NPMC01000005.1 Protein Homology CDS 74772 75413 . - 0 ID=cds-WP_000284012.1;Parent=gene-CCO57_RS09570;Dbxref=GenBank:WP_000284012.1;Name=WP_000284012.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=CCO57_RS09570;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284012.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 75513 75776 . - . ID=gene-CCO57_RS09575;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=CCO57_RS09575;old_locus_tag=CCO57_09565 NZ_NPMC01000005.1 Protein Homology CDS 75513 75776 . - 0 ID=cds-WP_000850547.1;Parent=gene-CCO57_RS09575;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=CCO57_RS09575;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 75884 77095 . - . ID=gene-CCO57_RS09580;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=CCO57_RS09580;old_locus_tag=CCO57_09570 NZ_NPMC01000005.1 Protein Homology CDS 75884 77095 . - 0 ID=cds-WP_000858711.1;Parent=gene-CCO57_RS09580;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=CCO57_RS09580;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 77235 78368 . - . ID=gene-CCO57_RS09585;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=CCO57_RS09585;old_locus_tag=CCO57_09575 NZ_NPMC01000005.1 Protein Homology CDS 77235 78368 . - 0 ID=cds-WP_001529015.1;Parent=gene-CCO57_RS09585;Dbxref=GenBank:WP_001529015.1;Name=WP_001529015.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=CCO57_RS09585;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001529015.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 78379 79491 . - . ID=gene-CCO57_RS09590;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=CCO57_RS09590;old_locus_tag=CCO57_09580 NZ_NPMC01000005.1 Protein Homology CDS 78379 79491 . - 0 ID=cds-WP_094914913.1;Parent=gene-CCO57_RS09590;Dbxref=GenBank:WP_094914913.1;Name=WP_094914913.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=CCO57_RS09590;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_094914913.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 79494 81395 . - . ID=gene-CCO57_RS09595;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO57_RS09595;old_locus_tag=CCO57_09585 NZ_NPMC01000005.1 Protein Homology CDS 79494 81395 . - 0 ID=cds-WP_000828700.1;Parent=gene-CCO57_RS09595;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=CCO57_RS09595;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 81426 81893 . - . ID=gene-CCO57_RS09600;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CCO57_RS09600;old_locus_tag=CCO57_09590 NZ_NPMC01000005.1 Protein Homology CDS 81426 81893 . - 0 ID=cds-WP_000776107.1;Parent=gene-CCO57_RS09600;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=CCO57_RS09600;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 81897 82214 . - . ID=gene-CCO57_RS09605;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CCO57_RS09605;old_locus_tag=CCO57_09595 NZ_NPMC01000005.1 Protein Homology CDS 81897 82214 . - 0 ID=cds-WP_001161670.1;Parent=gene-CCO57_RS09605;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=CCO57_RS09605;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 82543 83151 . - . ID=gene-CCO57_RS09610;Name=CCO57_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09610;old_locus_tag=CCO57_09600 NZ_NPMC01000005.1 Protein Homology CDS 82543 83151 . - 0 ID=cds-WP_094914914.1;Parent=gene-CCO57_RS09610;Dbxref=GenBank:WP_094914914.1;Name=WP_094914914.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=CCO57_RS09610;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_094914914.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 83248 84342 . + . ID=gene-CCO57_RS09615;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CCO57_RS09615;old_locus_tag=CCO57_09605 NZ_NPMC01000005.1 Protein Homology CDS 83248 84342 . + 0 ID=cds-WP_023212926.1;Parent=gene-CCO57_RS09615;Dbxref=GenBank:WP_023212926.1;Name=WP_023212926.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=CCO57_RS09615;product=threonine-phosphate decarboxylase CobD;protein_id=WP_023212926.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 84317 84958 . - . ID=gene-CCO57_RS09620;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CCO57_RS09620;old_locus_tag=CCO57_09610 NZ_NPMC01000005.1 Protein Homology CDS 84317 84958 . - 0 ID=cds-WP_023137128.1;Parent=gene-CCO57_RS09620;Dbxref=GenBank:WP_023137128.1;Name=WP_023137128.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=CCO57_RS09620;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_023137128.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 84960 85991 . - . ID=gene-CCO57_RS09625;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CCO57_RS09625;old_locus_tag=CCO57_09615 NZ_NPMC01000005.1 Protein Homology CDS 84960 85991 . - 0 ID=cds-WP_000620491.1;Parent=gene-CCO57_RS09625;Dbxref=GenBank:WP_000620491.1;Name=WP_000620491.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=CCO57_RS09625;product=DNA polymerase III subunit delta;protein_id=WP_000620491.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 85991 86581 . - . ID=gene-CCO57_RS09630;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=CCO57_RS09630;old_locus_tag=CCO57_09620 NZ_NPMC01000005.1 Protein Homology CDS 85991 86581 . - 0 ID=cds-WP_001269950.1;Parent=gene-CCO57_RS09630;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=CCO57_RS09630;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 86596 89178 . - . ID=gene-CCO57_RS09635;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CCO57_RS09635;old_locus_tag=CCO57_09625 NZ_NPMC01000005.1 Protein Homology CDS 86596 89178 . - 0 ID=cds-WP_079957637.1;Parent=gene-CCO57_RS09635;Dbxref=GenBank:WP_079957637.1;Name=WP_079957637.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=CCO57_RS09635;product=leucine--tRNA ligase;protein_id=WP_079957637.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 89415 89756 . + . ID=gene-CCO57_RS09640;Name=CCO57_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09640;old_locus_tag=CCO57_09630 NZ_NPMC01000005.1 Protein Homology CDS 89415 89756 . + 0 ID=cds-WP_001574029.1;Parent=gene-CCO57_RS09640;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=CCO57_RS09640;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 89772 90944 . + . ID=gene-CCO57_RS09645;Name=CCO57_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09645;old_locus_tag=CCO57_09635 NZ_NPMC01000005.1 Protein Homology CDS 89772 90944 . + 0 ID=cds-WP_001670689.1;Parent=gene-CCO57_RS09645;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=CCO57_RS09645;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 90994 91947 . + . ID=gene-CCO57_RS09650;Name=CCO57_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09650;old_locus_tag=CCO57_09640 NZ_NPMC01000005.1 Protein Homology CDS 90994 91947 . + 0 ID=cds-WP_000694477.1;Parent=gene-CCO57_RS09650;Dbxref=GenBank:WP_000694477.1;Name=WP_000694477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=CCO57_RS09650;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694477.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 92015 93943 . + . ID=gene-CCO57_RS09655;Name=CCO57_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09655;old_locus_tag=CCO57_09645 NZ_NPMC01000005.1 Protein Homology CDS 92015 93943 . + 0 ID=cds-WP_001044186.1;Parent=gene-CCO57_RS09655;Dbxref=GenBank:WP_001044186.1;Name=WP_001044186.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=CCO57_RS09655;product=sigma-54 interaction domain-containing protein;protein_id=WP_001044186.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 94036 94509 . + . ID=gene-CCO57_RS09660;Name=CCO57_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09660;old_locus_tag=CCO57_09650 NZ_NPMC01000005.1 Protein Homology CDS 94036 94509 . + 0 ID=cds-WP_001044886.1;Parent=gene-CCO57_RS09660;Dbxref=GenBank:WP_001044886.1;Name=WP_001044886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=CCO57_RS09660;product=zinc ribbon-containing protein;protein_id=WP_001044886.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 94595 95530 . - . ID=gene-CCO57_RS09665;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=CCO57_RS09665;old_locus_tag=CCO57_09655 NZ_NPMC01000005.1 Protein Homology CDS 94595 95530 . - 0 ID=cds-WP_023213791.1;Parent=gene-CCO57_RS09665;Dbxref=GenBank:WP_023213791.1;Name=WP_023213791.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=CCO57_RS09665;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_023213791.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 95647 96372 . - . ID=gene-CCO57_RS09670;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=CCO57_RS09670;old_locus_tag=CCO57_09660 NZ_NPMC01000005.1 Protein Homology CDS 95647 96372 . - 0 ID=cds-WP_000631369.1;Parent=gene-CCO57_RS09670;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=CCO57_RS09670;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 96372 97046 . - . ID=gene-CCO57_RS09675;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=CCO57_RS09675;old_locus_tag=CCO57_09665 NZ_NPMC01000005.1 Protein Homology CDS 96372 97046 . - 0 ID=cds-WP_000272802.1;Parent=gene-CCO57_RS09675;Dbxref=GenBank:WP_000272802.1;Name=WP_000272802.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=CCO57_RS09675;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272802.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 97046 97786 . - . ID=gene-CCO57_RS09680;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=CCO57_RS09680;old_locus_tag=CCO57_09670 NZ_NPMC01000005.1 Protein Homology CDS 97046 97786 . - 0 ID=cds-WP_000020930.1;Parent=gene-CCO57_RS09680;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=CCO57_RS09680;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 97946 98854 . - . ID=gene-CCO57_RS09685;Name=CCO57_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09685;old_locus_tag=CCO57_09675 NZ_NPMC01000005.1 Protein Homology CDS 97946 98854 . - 0 ID=cds-WP_001518176.1;Parent=gene-CCO57_RS09685;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=CCO57_RS09685;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 99209 100747 . - . ID=gene-CCO57_RS09695;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=CCO57_RS09695;old_locus_tag=CCO57_09685 NZ_NPMC01000005.1 Protein Homology CDS 99209 100747 . - 0 ID=cds-WP_023215220.1;Parent=gene-CCO57_RS09695;Dbxref=GenBank:WP_023215220.1;Name=WP_023215220.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=CCO57_RS09695;product=apolipoprotein N-acyltransferase;protein_id=WP_023215220.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 100767 101645 . - . ID=gene-CCO57_RS09700;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=CCO57_RS09700;old_locus_tag=CCO57_09690 NZ_NPMC01000005.1 Protein Homology CDS 100767 101645 . - 0 ID=cds-WP_001278612.1;Parent=gene-CCO57_RS09700;Dbxref=GenBank:WP_001278612.1;Name=WP_001278612.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=CCO57_RS09700;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278612.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 101803 102276 . - . ID=gene-CCO57_RS09705;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CCO57_RS09705;old_locus_tag=CCO57_09695 NZ_NPMC01000005.1 Protein Homology CDS 101803 102276 . - 0 ID=cds-WP_000084477.1;Parent=gene-CCO57_RS09705;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=CCO57_RS09705;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 102273 103319 . - . ID=gene-CCO57_RS09710;Name=CCO57_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09710;old_locus_tag=CCO57_09700 NZ_NPMC01000005.1 Protein Homology CDS 102273 103319 . - 0 ID=cds-WP_001018045.1;Parent=gene-CCO57_RS09710;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=CCO57_RS09710;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 103524 104948 . - . ID=gene-CCO57_RS09715;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CCO57_RS09715;old_locus_tag=CCO57_09705 NZ_NPMC01000005.1 Protein Homology CDS 103524 104948 . - 0 ID=cds-WP_001519200.1;Parent=gene-CCO57_RS09715;Dbxref=GenBank:WP_001519200.1;Name=WP_001519200.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=CCO57_RS09715;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001519200.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 105092 106267 . + . ID=gene-CCO57_RS09720;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=CCO57_RS09720;old_locus_tag=CCO57_09710 NZ_NPMC01000005.1 Protein Homology CDS 105092 106267 . + 0 ID=cds-WP_000184627.1;Parent=gene-CCO57_RS09720;Dbxref=GenBank:WP_000184627.1;Name=WP_000184627.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=CCO57_RS09720;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184627.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 106400 106474 . - . ID=gene-CCO57_RS09725;Name=CCO57_RS09725;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS09725;old_locus_tag=CCO57_09715 NZ_NPMC01000005.1 tRNAscan-SE tRNA 106400 106474 . - . ID=rna-CCO57_RS09725;Parent=gene-CCO57_RS09725;anticodon=(pos:complement(106440..106442));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09725;product=tRNA-Gln NZ_NPMC01000005.1 tRNAscan-SE exon 106400 106474 . - . ID=exon-CCO57_RS09725-1;Parent=rna-CCO57_RS09725;anticodon=(pos:complement(106440..106442));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09725;product=tRNA-Gln NZ_NPMC01000005.1 RefSeq gene 106518 106592 . - . ID=gene-CCO57_RS09730;Name=CCO57_RS09730;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS09730;old_locus_tag=CCO57_09720 NZ_NPMC01000005.1 tRNAscan-SE tRNA 106518 106592 . - . ID=rna-CCO57_RS09730;Parent=gene-CCO57_RS09730;anticodon=(pos:complement(106558..106560));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09730;product=tRNA-Gln NZ_NPMC01000005.1 tRNAscan-SE exon 106518 106592 . - . ID=exon-CCO57_RS09730-1;Parent=rna-CCO57_RS09730;anticodon=(pos:complement(106558..106560));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09730;product=tRNA-Gln NZ_NPMC01000005.1 RefSeq gene 106639 106715 . - . ID=gene-CCO57_RS09735;Name=CCO57_RS09735;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS09735;old_locus_tag=CCO57_09725 NZ_NPMC01000005.1 tRNAscan-SE tRNA 106639 106715 . - . ID=rna-CCO57_RS09735;Parent=gene-CCO57_RS09735;anticodon=(pos:complement(106679..106681));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09735;product=tRNA-Met NZ_NPMC01000005.1 tRNAscan-SE exon 106639 106715 . - . ID=exon-CCO57_RS09735-1;Parent=rna-CCO57_RS09735;anticodon=(pos:complement(106679..106681));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09735;product=tRNA-Met NZ_NPMC01000005.1 RefSeq gene 106731 106805 . - . ID=gene-CCO57_RS09740;Name=CCO57_RS09740;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS09740;old_locus_tag=CCO57_09730 NZ_NPMC01000005.1 tRNAscan-SE tRNA 106731 106805 . - . ID=rna-CCO57_RS09740;Parent=gene-CCO57_RS09740;anticodon=(pos:complement(106771..106773));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09740;product=tRNA-Gln NZ_NPMC01000005.1 tRNAscan-SE exon 106731 106805 . - . ID=exon-CCO57_RS09740-1;Parent=rna-CCO57_RS09740;anticodon=(pos:complement(106771..106773));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09740;product=tRNA-Gln NZ_NPMC01000005.1 RefSeq gene 106841 106915 . - . ID=gene-CCO57_RS09745;Name=CCO57_RS09745;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS09745;old_locus_tag=CCO57_09735 NZ_NPMC01000005.1 tRNAscan-SE tRNA 106841 106915 . - . ID=rna-CCO57_RS09745;Parent=gene-CCO57_RS09745;anticodon=(pos:complement(106881..106883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09745;product=tRNA-Gln NZ_NPMC01000005.1 tRNAscan-SE exon 106841 106915 . - . ID=exon-CCO57_RS09745-1;Parent=rna-CCO57_RS09745;anticodon=(pos:complement(106881..106883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09745;product=tRNA-Gln NZ_NPMC01000005.1 RefSeq gene 106939 107023 . - . ID=gene-CCO57_RS09750;Name=CCO57_RS09750;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS09750;old_locus_tag=CCO57_09740 NZ_NPMC01000005.1 tRNAscan-SE tRNA 106939 107023 . - . ID=rna-CCO57_RS09750;Parent=gene-CCO57_RS09750;anticodon=(pos:complement(106987..106989));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09750;product=tRNA-Leu NZ_NPMC01000005.1 tRNAscan-SE exon 106939 107023 . - . ID=exon-CCO57_RS09750-1;Parent=rna-CCO57_RS09750;anticodon=(pos:complement(106987..106989));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09750;product=tRNA-Leu NZ_NPMC01000005.1 RefSeq gene 107032 107108 . - . ID=gene-CCO57_RS09755;Name=CCO57_RS09755;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS09755;old_locus_tag=CCO57_09745 NZ_NPMC01000005.1 tRNAscan-SE tRNA 107032 107108 . - . ID=rna-CCO57_RS09755;Parent=gene-CCO57_RS09755;anticodon=(pos:complement(107072..107074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09755;product=tRNA-Met NZ_NPMC01000005.1 tRNAscan-SE exon 107032 107108 . - . ID=exon-CCO57_RS09755-1;Parent=rna-CCO57_RS09755;anticodon=(pos:complement(107072..107074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS09755;product=tRNA-Met NZ_NPMC01000005.1 RefSeq gene 107332 108996 . - . ID=gene-CCO57_RS09760;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=CCO57_RS09760;old_locus_tag=CCO57_09750 NZ_NPMC01000005.1 Protein Homology CDS 107332 108996 . - 0 ID=cds-WP_094914915.1;Parent=gene-CCO57_RS09760;Dbxref=GenBank:WP_094914915.1;Name=WP_094914915.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=CCO57_RS09760;product=asparagine synthase B;protein_id=WP_094914915.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 109286 110038 . - . ID=gene-CCO57_RS09770;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=CCO57_RS09770;old_locus_tag=CCO57_09760 NZ_NPMC01000005.1 Protein Homology CDS 109286 110038 . - 0 ID=cds-WP_000153143.1;Parent=gene-CCO57_RS09770;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=CCO57_RS09770;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 110085 111305 . - . ID=gene-CCO57_RS09775;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=CCO57_RS09775;old_locus_tag=CCO57_09765 NZ_NPMC01000005.1 Protein Homology CDS 110085 111305 . - 0 ID=cds-WP_001529052.1;Parent=gene-CCO57_RS09775;Dbxref=GenBank:WP_001529052.1;Name=WP_001529052.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=CCO57_RS09775;product=DNA-binding transcriptional regulator NagC;protein_id=WP_001529052.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 111310 112464 . - . ID=gene-CCO57_RS09780;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CCO57_RS09780;old_locus_tag=CCO57_09770 NZ_NPMC01000005.1 Protein Homology CDS 111310 112464 . - 0 ID=cds-WP_000271186.1;Parent=gene-CCO57_RS09780;Dbxref=GenBank:WP_000271186.1;Name=WP_000271186.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=CCO57_RS09780;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271186.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 112524 113324 . - . ID=gene-CCO57_RS09785;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CCO57_RS09785;old_locus_tag=CCO57_09775 NZ_NPMC01000005.1 Protein Homology CDS 112524 113324 . - 0 ID=cds-WP_001237059.1;Parent=gene-CCO57_RS09785;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=CCO57_RS09785;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 113651 115603 . + . ID=gene-CCO57_RS09790;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=CCO57_RS09790;old_locus_tag=CCO57_09780 NZ_NPMC01000005.1 Protein Homology CDS 113651 115603 . + 0 ID=cds-WP_001023069.1;Parent=gene-CCO57_RS09790;Dbxref=GenBank:WP_001023069.1;Name=WP_001023069.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=CCO57_RS09790;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023069.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 115814 117481 . + . ID=gene-CCO57_RS09795;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=CCO57_RS09795;old_locus_tag=CCO57_09785 NZ_NPMC01000005.1 Protein Homology CDS 115814 117481 . + 0 ID=cds-WP_001287181.1;Parent=gene-CCO57_RS09795;Dbxref=GenBank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=CCO57_RS09795;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 118081 119487 . + . ID=gene-CCO57_RS09805;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=CCO57_RS09805;old_locus_tag=CCO57_09795 NZ_NPMC01000005.1 Protein Homology CDS 118081 119487 . + 0 ID=cds-WP_001258803.1;Parent=gene-CCO57_RS09805;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=CCO57_RS09805;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 119537 119869 . + . ID=gene-CCO57_RS09810;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=CCO57_RS09810;old_locus_tag=CCO57_09800 NZ_NPMC01000005.1 Protein Homology CDS 119537 119869 . + 0 ID=cds-WP_000722260.1;Parent=gene-CCO57_RS09810;Dbxref=GenBank:WP_000722260.1;Name=WP_000722260.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=CCO57_RS09810;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722260.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 119918 121222 . - . ID=gene-CCO57_RS09815;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=CCO57_RS09815;old_locus_tag=CCO57_09805 NZ_NPMC01000005.1 Protein Homology CDS 119918 121222 . - 0 ID=cds-WP_000057014.1;Parent=gene-CCO57_RS09815;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=CCO57_RS09815;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 121273 122412 . - . ID=gene-CCO57_RS09820;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=CCO57_RS09820;old_locus_tag=CCO57_09810 NZ_NPMC01000005.1 Protein Homology CDS 121273 122412 . - 0 ID=cds-WP_000811136.1;Parent=gene-CCO57_RS09820;Dbxref=GenBank:WP_000811136.1;Name=WP_000811136.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=CCO57_RS09820;product=tricarballylate utilization protein TcuB;protein_id=WP_000811136.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 122399 123802 . - . ID=gene-CCO57_RS09825;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=CCO57_RS09825;old_locus_tag=CCO57_09815 NZ_NPMC01000005.1 Protein Homology CDS 122399 123802 . - 0 ID=cds-WP_094914916.1;Parent=gene-CCO57_RS09825;Dbxref=GenBank:WP_094914916.1;Name=WP_094914916.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=CCO57_RS09825;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_094914916.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 123900 124826 . - . ID=gene-CCO57_RS09830;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=CCO57_RS09830;old_locus_tag=CCO57_09820 NZ_NPMC01000005.1 Protein Homology CDS 123900 124826 . - 0 ID=cds-WP_000423371.1;Parent=gene-CCO57_RS09830;Dbxref=GenBank:WP_000423371.1;Name=WP_000423371.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=CCO57_RS09830;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423371.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 124941 125393 . - . ID=gene-CCO57_RS09835;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CCO57_RS09835;old_locus_tag=CCO57_09825 NZ_NPMC01000005.1 Protein Homology CDS 124941 125393 . - 0 ID=cds-WP_000131699.1;Parent=gene-CCO57_RS09835;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=CCO57_RS09835;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11 NZ_NPMC01000005.1 RefSeq pseudogene 125386 125471 . - . ID=gene-CCO57_RS24395;Name=CCO57_RS24395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24395;pseudo=true NZ_NPMC01000005.1 Protein Homology CDS 125386 125471 . - 0 ID=cds-CCO57_RS24395;Parent=gene-CCO57_RS24395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=CCO57_RS24395;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 125675 126205 . - . ID=gene-CCO57_RS09840;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=CCO57_RS09840;old_locus_tag=CCO57_09830 NZ_NPMC01000005.1 Protein Homology CDS 125675 126205 . - 0 ID=cds-WP_001018621.1;Parent=gene-CCO57_RS09840;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=CCO57_RS09840;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 126356 126649 . - . ID=gene-CCO57_RS09845;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=CCO57_RS09845;old_locus_tag=CCO57_09835 NZ_NPMC01000005.1 Protein Homology CDS 126356 126649 . - 0 ID=cds-WP_001040939.1;Parent=gene-CCO57_RS09845;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=CCO57_RS09845;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 126783 127553 . - . ID=gene-CCO57_RS09850;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=CCO57_RS09850;old_locus_tag=CCO57_09840 NZ_NPMC01000005.1 Protein Homology CDS 126783 127553 . - 0 ID=cds-WP_000773249.1;Parent=gene-CCO57_RS09850;Dbxref=GenBank:WP_000773249.1;Name=WP_000773249.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=CCO57_RS09850;product=esterase;protein_id=WP_000773249.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 127738 128280 . + . ID=gene-CCO57_RS09855;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=CCO57_RS09855;old_locus_tag=CCO57_09845 NZ_NPMC01000005.1 Protein Homology CDS 127738 128280 . + 0 ID=cds-WP_000848395.1;Parent=gene-CCO57_RS09855;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=CCO57_RS09855;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 128305 129945 . + . ID=gene-CCO57_RS09860;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=CCO57_RS09860;old_locus_tag=CCO57_09850 NZ_NPMC01000005.1 Protein Homology CDS 128305 129945 . + 0 ID=cds-WP_000974372.1;Parent=gene-CCO57_RS09860;Dbxref=GenBank:WP_000974372.1;Name=WP_000974372.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=CCO57_RS09860;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974372.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 130060 130545 . - . ID=gene-CCO57_RS09865;Name=CCO57_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09865;old_locus_tag=CCO57_09855 NZ_NPMC01000005.1 Protein Homology CDS 130060 130545 . - 0 ID=cds-WP_094914917.1;Parent=gene-CCO57_RS09865;Dbxref=GenBank:WP_094914917.1;Name=WP_094914917.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=CCO57_RS09865;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_094914917.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 130610 131929 . - . ID=gene-CCO57_RS09870;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=CCO57_RS09870;old_locus_tag=CCO57_09860 NZ_NPMC01000005.1 Protein Homology CDS 130610 131929 . - 0 ID=cds-WP_000042658.1;Parent=gene-CCO57_RS09870;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=CCO57_RS09870;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 131926 134124 . - . ID=gene-CCO57_RS09875;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=CCO57_RS09875;old_locus_tag=CCO57_09865 NZ_NPMC01000005.1 Protein Homology CDS 131926 134124 . - 0 ID=cds-WP_001292402.1;Parent=gene-CCO57_RS09875;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=CCO57_RS09875;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 134505 134609 . - . ID=gene-CCO57_RS24080;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=CCO57_RS24080 NZ_NPMC01000005.1 Protein Homology CDS 134505 134609 . - 0 ID=cds-WP_015632840.1;Parent=gene-CCO57_RS24080;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=CCO57_RS24080;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 134887 135564 . - . ID=gene-CCO57_RS09880;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=CCO57_RS09880;old_locus_tag=CCO57_09870 NZ_NPMC01000005.1 Protein Homology CDS 134887 135564 . - 0 ID=cds-WP_000186053.1;Parent=gene-CCO57_RS09880;Dbxref=GenBank:WP_000186053.1;Name=WP_000186053.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=CCO57_RS09880;product=two-component system response regulator KdpE;protein_id=WP_000186053.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 135561 138245 . - . ID=gene-CCO57_RS09885;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=CCO57_RS09885;old_locus_tag=CCO57_09875 NZ_NPMC01000005.1 Protein Homology CDS 135561 138245 . - 0 ID=cds-WP_023215223.1;Parent=gene-CCO57_RS09885;Dbxref=GenBank:WP_023215223.1;Name=WP_023215223.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=CCO57_RS09885;product=two-component system sensor histidine kinase KdpD;protein_id=WP_023215223.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 138242 138826 . - . ID=gene-CCO57_RS09890;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CCO57_RS09890;old_locus_tag=CCO57_09880 NZ_NPMC01000005.1 Protein Homology CDS 138242 138826 . - 0 ID=cds-WP_094914930.1;Parent=gene-CCO57_RS09890;Dbxref=GenBank:WP_094914930.1;Name=WP_094914930.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=CCO57_RS09890;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_094914930.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 138835 140883 . - . ID=gene-CCO57_RS09895;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CCO57_RS09895;old_locus_tag=CCO57_09885 NZ_NPMC01000005.1 Protein Homology CDS 138835 140883 . - 0 ID=cds-WP_000088039.1;Parent=gene-CCO57_RS09895;Dbxref=GenBank:WP_000088039.1;Name=WP_000088039.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=CCO57_RS09895;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088039.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 140904 142583 . - . ID=gene-CCO57_RS09900;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CCO57_RS09900;old_locus_tag=CCO57_09890 NZ_NPMC01000005.1 Protein Homology CDS 140904 142583 . - 0 ID=cds-WP_000730068.1;Parent=gene-CCO57_RS09900;Dbxref=GenBank:WP_000730068.1;Name=WP_000730068.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=CCO57_RS09900;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730068.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 142583 142672 . - . ID=gene-CCO57_RS09905;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CCO57_RS09905;old_locus_tag=CCO57_09895 NZ_NPMC01000005.1 Protein Homology CDS 142583 142672 . - 0 ID=cds-WP_001670793.1;Parent=gene-CCO57_RS09905;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=CCO57_RS09905;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 143009 143215 . + . ID=gene-CCO57_RS09910;Name=CCO57_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09910;old_locus_tag=CCO57_09900 NZ_NPMC01000005.1 Protein Homology CDS 143009 143215 . + 0 ID=cds-WP_000401437.1;Parent=gene-CCO57_RS09910;Dbxref=GenBank:WP_000401437.1;Name=WP_000401437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=CCO57_RS09910;product=YbfA family protein;protein_id=WP_000401437.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 143326 144747 . + . ID=gene-CCO57_RS09915;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=CCO57_RS09915;old_locus_tag=CCO57_09905 NZ_NPMC01000005.1 Protein Homology CDS 143326 144747 . + 0 ID=cds-WP_038389839.1;Parent=gene-CCO57_RS09915;Dbxref=GenBank:WP_038389839.1;Name=WP_038389839.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=CCO57_RS09915;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_038389839.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 144786 146267 . - . ID=gene-CCO57_RS09920;Name=CCO57_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09920;old_locus_tag=CCO57_09910 NZ_NPMC01000005.1 Protein Homology CDS 144786 146267 . - 0 ID=cds-WP_001041123.1;Parent=gene-CCO57_RS09920;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=CCO57_RS09920;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 146596 147339 . + . ID=gene-CCO57_RS09930;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=CCO57_RS09930;old_locus_tag=CCO57_09920 NZ_NPMC01000005.1 Protein Homology CDS 146596 147339 . + 0 ID=cds-WP_000798844.1;Parent=gene-CCO57_RS09930;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=CCO57_RS09930;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 147355 148011 . + . ID=gene-CCO57_RS09935;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CCO57_RS09935;old_locus_tag=CCO57_09925 NZ_NPMC01000005.1 Protein Homology CDS 147355 148011 . + 0 ID=cds-WP_001188367.1;Parent=gene-CCO57_RS09935;Dbxref=GenBank:WP_001188367.1;Name=WP_001188367.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=CCO57_RS09935;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188367.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 148005 148937 . + . ID=gene-CCO57_RS09940;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=CCO57_RS09940;old_locus_tag=CCO57_09930 NZ_NPMC01000005.1 Protein Homology CDS 148005 148937 . + 0 ID=cds-WP_000932044.1;Parent=gene-CCO57_RS09940;Dbxref=GenBank:WP_000932044.1;Name=WP_000932044.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=CCO57_RS09940;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932044.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 148927 149661 . + . ID=gene-CCO57_RS09945;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CCO57_RS09945;old_locus_tag=CCO57_09935 NZ_NPMC01000005.1 Protein Homology CDS 148927 149661 . + 0 ID=cds-WP_001017904.1;Parent=gene-CCO57_RS09945;Dbxref=GenBank:WP_001017904.1;Name=WP_001017904.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=CCO57_RS09945;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017904.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 149985 150116 . + . ID=gene-CCO57_RS09950;Name=CCO57_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09950;old_locus_tag=CCO57_09940 NZ_NPMC01000005.1 Protein Homology CDS 149985 150116 . + 0 ID=cds-WP_001528846.1;Parent=gene-CCO57_RS09950;Dbxref=GenBank:WP_001528846.1;Name=WP_001528846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=CCO57_RS09950;product=hypothetical protein;protein_id=WP_001528846.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 150176 150742 . + . ID=gene-CCO57_RS09955;Name=CCO57_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09955;old_locus_tag=CCO57_09945 NZ_NPMC01000005.1 Protein Homology CDS 150176 150742 . + 0 ID=cds-WP_000824704.1;Parent=gene-CCO57_RS09955;Dbxref=GenBank:WP_000824704.1;Name=WP_000824704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=CCO57_RS09955;product=tyrosine-type DNA invertase;protein_id=WP_000824704.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 151202 151537 . + . ID=gene-CCO57_RS09960;Name=CCO57_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09960;old_locus_tag=CCO57_09950 NZ_NPMC01000005.1 Protein Homology CDS 151202 151537 . + 0 ID=cds-WP_077908552.1;Parent=gene-CCO57_RS09960;Dbxref=GenBank:WP_077908552.1;Name=WP_077908552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=CCO57_RS09960;product=hypothetical protein;protein_id=WP_077908552.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 151539 152279 . + . ID=gene-CCO57_RS09965;Name=CCO57_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09965;old_locus_tag=CCO57_09955 NZ_NPMC01000005.1 Protein Homology CDS 151539 152279 . + 0 ID=cds-WP_001194235.1;Parent=gene-CCO57_RS09965;Dbxref=GenBank:WP_001194235.1;Name=WP_001194235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=CCO57_RS09965;product=hypothetical protein;protein_id=WP_001194235.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 152565 153716 . + . ID=gene-CCO57_RS09970;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=CCO57_RS09970;old_locus_tag=CCO57_09960 NZ_NPMC01000005.1 Protein Homology CDS 152565 153716 . + 0 ID=cds-WP_001531005.1;Parent=gene-CCO57_RS09970;Dbxref=GenBank:WP_001531005.1;Name=WP_001531005.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=CCO57_RS09970;product=UDP-galactopyranose mutase;protein_id=WP_001531005.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 153713 154609 . + . ID=gene-CCO57_RS09975;Name=CCO57_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09975;old_locus_tag=CCO57_09965 NZ_NPMC01000005.1 Protein Homology CDS 153713 154609 . + 0 ID=cds-WP_000973917.1;Parent=gene-CCO57_RS09975;Dbxref=GenBank:WP_000973917.1;Name=WP_000973917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=CCO57_RS09975;product=glycosyltransferase;protein_id=WP_000973917.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 154622 155755 . + . ID=gene-CCO57_RS09980;Name=CCO57_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09980;old_locus_tag=CCO57_09970 NZ_NPMC01000005.1 Protein Homology CDS 154622 155755 . + 0 ID=cds-WP_000824903.1;Parent=gene-CCO57_RS09980;Dbxref=GenBank:WP_000824903.1;Name=WP_000824903.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=CCO57_RS09980;product=glycosyltransferase family 4 protein;protein_id=WP_000824903.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 155884 156654 . + . ID=gene-CCO57_RS09985;Name=CCO57_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09985;old_locus_tag=CCO57_09975 NZ_NPMC01000005.1 Protein Homology CDS 155884 156654 . + 0 ID=cds-WP_000998822.1;Parent=gene-CCO57_RS09985;Dbxref=GenBank:WP_000998822.1;Name=WP_000998822.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=CCO57_RS09985;product=ABC transporter permease;protein_id=WP_000998822.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 156658 157368 . + . ID=gene-CCO57_RS09990;Name=CCO57_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09990;old_locus_tag=CCO57_09980 NZ_NPMC01000005.1 Protein Homology CDS 156658 157368 . + 0 ID=cds-WP_000702852.1;Parent=gene-CCO57_RS09990;Dbxref=GenBank:WP_000702852.1;Name=WP_000702852.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=CCO57_RS09990;product=ABC transporter ATP-binding protein;protein_id=WP_000702852.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 157462 159240 . + . ID=gene-CCO57_RS09995;Name=CCO57_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS09995;old_locus_tag=CCO57_09985 NZ_NPMC01000005.1 Protein Homology CDS 157462 159240 . + 0 ID=cds-WP_000273738.1;Parent=gene-CCO57_RS09995;Dbxref=GenBank:WP_000273738.1;Name=WP_000273738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=CCO57_RS09995;product=glycosyltransferase;protein_id=WP_000273738.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 159433 160266 . + . ID=gene-CCO57_RS10000;Name=CCO57_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10000;old_locus_tag=CCO57_09990 NZ_NPMC01000005.1 Protein Homology CDS 159433 160266 . + 0 ID=cds-WP_023207388.1;Parent=gene-CCO57_RS10000;Dbxref=GenBank:WP_023207388.1;Name=WP_023207388.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=CCO57_RS10000;product=glycosyltransferase family A protein;protein_id=WP_023207388.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 160324 162219 . + . ID=gene-CCO57_RS10005;Name=CCO57_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10005;old_locus_tag=CCO57_09995 NZ_NPMC01000005.1 Protein Homology CDS 160324 162219 . + 0 ID=cds-WP_077906419.1;Parent=gene-CCO57_RS10005;Dbxref=GenBank:WP_077906419.1;Name=WP_077906419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=CCO57_RS10005;product=HAD family hydrolase;protein_id=WP_077906419.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 162287 162424 . + . ID=gene-CCO57_RS10010;Name=CCO57_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10010;old_locus_tag=CCO57_10000 NZ_NPMC01000005.1 Protein Homology CDS 162287 162424 . + 0 ID=cds-WP_001519950.1;Parent=gene-CCO57_RS10010;Dbxref=GenBank:WP_001519950.1;Name=WP_001519950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=CCO57_RS10010;product=hypothetical protein;protein_id=WP_001519950.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 162473 163264 . + . ID=gene-CCO57_RS10015;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=CCO57_RS10015;old_locus_tag=CCO57_10005 NZ_NPMC01000005.1 Protein Homology CDS 162473 163264 . + 0 ID=cds-WP_001113961.1;Parent=gene-CCO57_RS10015;Dbxref=GenBank:WP_001113961.1;Name=WP_001113961.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=CCO57_RS10015;product=endonuclease VIII;protein_id=WP_001113961.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 163319 164365 . - . ID=gene-CCO57_RS10020;Name=CCO57_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10020;old_locus_tag=CCO57_10010 NZ_NPMC01000005.1 Protein Homology CDS 163319 164365 . - 0 ID=cds-WP_023138051.1;Parent=gene-CCO57_RS10020;Dbxref=GenBank:WP_023138051.1;Name=WP_023138051.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=CCO57_RS10020;product=AbrB family transcriptional regulator;protein_id=WP_023138051.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 164502 165785 . - . ID=gene-CCO57_RS10025;Name=CCO57_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10025;old_locus_tag=CCO57_10015 NZ_NPMC01000005.1 Protein Homology CDS 164502 165785 . - 0 ID=cds-WP_000785811.1;Parent=gene-CCO57_RS10025;Dbxref=GenBank:WP_000785811.1;Name=WP_000785811.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=CCO57_RS10025;product=citrate synthase;protein_id=WP_000785811.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 166011 166142 . - . ID=gene-CCO57_RS24940;Name=CCO57_RS24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24940 NZ_NPMC01000005.1 Protein Homology CDS 166011 166142 . - 0 ID=cds-WP_418142699.1;Parent=gene-CCO57_RS24940;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=CCO57_RS24940;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 166525 166929 . + . ID=gene-CCO57_RS10040;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=CCO57_RS10040;old_locus_tag=CCO57_10030 NZ_NPMC01000005.1 Protein Homology CDS 166525 166929 . + 0 ID=cds-WP_000263340.1;Parent=gene-CCO57_RS10040;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=CCO57_RS10040;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 166923 167270 . + . ID=gene-CCO57_RS10045;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=CCO57_RS10045;old_locus_tag=CCO57_10035 NZ_NPMC01000005.1 Protein Homology CDS 166923 167270 . + 0 ID=cds-WP_000254356.1;Parent=gene-CCO57_RS10045;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=CCO57_RS10045;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 167270 169036 . + . ID=gene-CCO57_RS10050;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CCO57_RS10050;old_locus_tag=CCO57_10040 NZ_NPMC01000005.1 Protein Homology CDS 167270 169036 . + 0 ID=cds-WP_000775561.1;Parent=gene-CCO57_RS10050;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=CCO57_RS10050;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 169053 169769 . + . ID=gene-CCO57_RS10055;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CCO57_RS10055;old_locus_tag=CCO57_10045 NZ_NPMC01000005.1 Protein Homology CDS 169053 169769 . + 0 ID=cds-WP_001537859.1;Parent=gene-CCO57_RS10055;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=CCO57_RS10055;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 170293 173094 . + . ID=gene-CCO57_RS10060;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=CCO57_RS10060;old_locus_tag=CCO57_10050 NZ_NPMC01000005.1 Protein Homology CDS 170293 173094 . + 0 ID=cds-WP_001181500.1;Parent=gene-CCO57_RS10060;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=CCO57_RS10060;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 173109 174317 . + . ID=gene-CCO57_RS10065;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=CCO57_RS10065;old_locus_tag=CCO57_10055 NZ_NPMC01000005.1 Protein Homology CDS 173109 174317 . + 0 ID=cds-WP_000099858.1;Parent=gene-CCO57_RS10065;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=CCO57_RS10065;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 174459 175625 . + . ID=gene-CCO57_RS10070;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CCO57_RS10070;old_locus_tag=CCO57_10060 NZ_NPMC01000005.1 Protein Homology CDS 174459 175625 . + 0 ID=cds-WP_001048590.1;Parent=gene-CCO57_RS10070;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=CCO57_RS10070;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 175625 176494 . + . ID=gene-CCO57_RS10075;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CCO57_RS10075;old_locus_tag=CCO57_10065 NZ_NPMC01000005.1 Protein Homology CDS 175625 176494 . + 0 ID=cds-WP_000114631.1;Parent=gene-CCO57_RS10075;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=CCO57_RS10075;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 178076 179644 . + . ID=gene-CCO57_RS10080;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=CCO57_RS10080;old_locus_tag=CCO57_10070 NZ_NPMC01000005.1 Protein Homology CDS 178076 179644 . + 0 ID=cds-WP_000884369.1;Parent=gene-CCO57_RS10080;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=CCO57_RS10080;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 179660 180799 . + . ID=gene-CCO57_RS10085;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO57_RS10085;old_locus_tag=CCO57_10075 NZ_NPMC01000005.1 Protein Homology CDS 179660 180799 . + 0 ID=cds-WP_000568258.1;Parent=gene-CCO57_RS10085;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=CCO57_RS10085;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 180814 180927 . + . ID=gene-CCO57_RS10090;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=CCO57_RS10090;old_locus_tag=CCO57_10080 NZ_NPMC01000005.1 Protein Homology CDS 180814 180927 . + 0 ID=cds-WP_023214132.1;Parent=gene-CCO57_RS10090;Dbxref=GenBank:WP_023214132.1;Name=WP_023214132.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=CCO57_RS10090;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_023214132.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 180927 181220 . + . ID=gene-CCO57_RS10095;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=CCO57_RS10095;old_locus_tag=CCO57_10085 NZ_NPMC01000005.1 Protein Homology CDS 180927 181220 . + 0 ID=cds-WP_000148790.1;Parent=gene-CCO57_RS10095;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=CCO57_RS10095;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 181449 181853 . + . ID=gene-CCO57_RS10100;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=CCO57_RS10100;old_locus_tag=CCO57_10090 NZ_NPMC01000005.1 Protein Homology CDS 181449 181853 . + 0 ID=cds-WP_094914918.1;Parent=gene-CCO57_RS10100;Dbxref=GenBank:WP_094914918.1;Name=WP_094914918.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=CCO57_RS10100;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_094914918.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 181850 182542 . + . ID=gene-CCO57_RS10105;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=CCO57_RS10105;old_locus_tag=CCO57_10095 NZ_NPMC01000005.1 Protein Homology CDS 181850 182542 . + 0 ID=cds-WP_000131318.1;Parent=gene-CCO57_RS10105;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=CCO57_RS10105;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 182546 182974 . + . ID=gene-CCO57_RS10110;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=CCO57_RS10110;old_locus_tag=CCO57_10100 NZ_NPMC01000005.1 Protein Homology CDS 182546 182974 . + 0 ID=cds-WP_000124676.1;Parent=gene-CCO57_RS10110;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=CCO57_RS10110;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 183039 184217 . + . ID=gene-CCO57_RS10115;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=CCO57_RS10115;old_locus_tag=CCO57_10105 NZ_NPMC01000005.1 Protein Homology CDS 183039 184217 . + 0 ID=cds-WP_094914919.1;Parent=gene-CCO57_RS10115;Dbxref=GenBank:WP_094914919.1;Name=WP_094914919.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=CCO57_RS10115;product=cell envelope integrity protein TolA;protein_id=WP_094914919.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 184341 185633 . + . ID=gene-CCO57_RS10120;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=CCO57_RS10120;old_locus_tag=CCO57_10110 NZ_NPMC01000005.1 Protein Homology CDS 184341 185633 . + 0 ID=cds-WP_001562341.1;Parent=gene-CCO57_RS10120;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=CCO57_RS10120;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 185668 186192 . + . ID=gene-CCO57_RS10125;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=CCO57_RS10125;old_locus_tag=CCO57_10115 NZ_NPMC01000005.1 Protein Homology CDS 185668 186192 . + 0 ID=cds-WP_001176621.1;Parent=gene-CCO57_RS10125;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=CCO57_RS10125;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 186202 186990 . + . ID=gene-CCO57_RS10130;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=CCO57_RS10130;old_locus_tag=CCO57_10120 NZ_NPMC01000005.1 Protein Homology CDS 186202 186990 . + 0 ID=cds-WP_000097553.1;Parent=gene-CCO57_RS10130;Dbxref=GenBank:WP_000097553.1;Name=WP_000097553.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=CCO57_RS10130;product=cell division protein CpoB;protein_id=WP_000097553.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 187155 187230 . + . ID=gene-CCO57_RS10135;Name=CCO57_RS10135;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS10135;old_locus_tag=CCO57_10125 NZ_NPMC01000005.1 tRNAscan-SE tRNA 187155 187230 . + . ID=rna-CCO57_RS10135;Parent=gene-CCO57_RS10135;anticodon=(pos:187188..187190);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS10135;product=tRNA-Lys NZ_NPMC01000005.1 tRNAscan-SE exon 187155 187230 . + . ID=exon-CCO57_RS10135-1;Parent=rna-CCO57_RS10135;anticodon=(pos:187188..187190);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS10135;product=tRNA-Lys NZ_NPMC01000005.1 RefSeq gene 187368 187443 . + . ID=gene-CCO57_RS10140;Name=CCO57_RS10140;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS10140;old_locus_tag=CCO57_10130 NZ_NPMC01000005.1 tRNAscan-SE tRNA 187368 187443 . + . ID=rna-CCO57_RS10140;Parent=gene-CCO57_RS10140;anticodon=(pos:187401..187403);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS10140;product=tRNA-Val NZ_NPMC01000005.1 tRNAscan-SE exon 187368 187443 . + . ID=exon-CCO57_RS10140-1;Parent=rna-CCO57_RS10140;anticodon=(pos:187401..187403);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS10140;product=tRNA-Val NZ_NPMC01000005.1 RefSeq gene 187447 187522 . + . ID=gene-CCO57_RS10145;Name=CCO57_RS10145;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS10145;old_locus_tag=CCO57_10135 NZ_NPMC01000005.1 tRNAscan-SE tRNA 187447 187522 . + . ID=rna-CCO57_RS10145;Parent=gene-CCO57_RS10145;anticodon=(pos:187480..187482);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS10145;product=tRNA-Lys NZ_NPMC01000005.1 tRNAscan-SE exon 187447 187522 . + . ID=exon-CCO57_RS10145-1;Parent=rna-CCO57_RS10145;anticodon=(pos:187480..187482);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS10145;product=tRNA-Lys NZ_NPMC01000005.1 RefSeq gene 187665 187740 . + . ID=gene-CCO57_RS10150;Name=CCO57_RS10150;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS10150;old_locus_tag=CCO57_10140 NZ_NPMC01000005.1 tRNAscan-SE tRNA 187665 187740 . + . ID=rna-CCO57_RS10150;Parent=gene-CCO57_RS10150;anticodon=(pos:187698..187700);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS10150;product=tRNA-Lys NZ_NPMC01000005.1 tRNAscan-SE exon 187665 187740 . + . ID=exon-CCO57_RS10150-1;Parent=rna-CCO57_RS10150;anticodon=(pos:187698..187700);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS10150;product=tRNA-Lys NZ_NPMC01000005.1 RefSeq gene 187774 187849 . + . ID=gene-CCO57_RS10155;Name=CCO57_RS10155;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS10155;old_locus_tag=CCO57_10145 NZ_NPMC01000005.1 tRNAscan-SE tRNA 187774 187849 . + . ID=rna-CCO57_RS10155;Parent=gene-CCO57_RS10155;anticodon=(pos:187807..187809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS10155;product=tRNA-Lys NZ_NPMC01000005.1 tRNAscan-SE exon 187774 187849 . + . ID=exon-CCO57_RS10155-1;Parent=rna-CCO57_RS10155;anticodon=(pos:187807..187809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS10155;product=tRNA-Lys NZ_NPMC01000005.1 RefSeq gene 187879 188004 . + . ID=gene-CCO57_RS10160;Name=CCO57_RS10160;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO57_RS10160;old_locus_tag=CCO57_10150 NZ_NPMC01000005.1 cmsearch ncRNA 187879 188004 . + . ID=rna-CCO57_RS10160;Parent=gene-CCO57_RS10160;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS10160;product=RtT sRNA NZ_NPMC01000005.1 cmsearch exon 187879 188004 . + . ID=exon-CCO57_RS10160-1;Parent=rna-CCO57_RS10160;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS10160;product=RtT sRNA NZ_NPMC01000005.1 RefSeq gene 188034 188159 . + . ID=gene-CCO57_RS10165;Name=CCO57_RS10165;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO57_RS10165;old_locus_tag=CCO57_10155 NZ_NPMC01000005.1 cmsearch ncRNA 188034 188159 . + . ID=rna-CCO57_RS10165;Parent=gene-CCO57_RS10165;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS10165;product=RtT sRNA NZ_NPMC01000005.1 cmsearch exon 188034 188159 . + . ID=exon-CCO57_RS10165-1;Parent=rna-CCO57_RS10165;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS10165;product=RtT sRNA NZ_NPMC01000005.1 RefSeq gene 188318 188785 . + . ID=gene-CCO57_RS10170;Name=CCO57_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10170;old_locus_tag=CCO57_10160 NZ_NPMC01000005.1 Protein Homology CDS 188318 188785 . + 0 ID=cds-WP_000829719.1;Parent=gene-CCO57_RS10170;Dbxref=GenBank:WP_000829719.1;Name=WP_000829719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829719.1;locus_tag=CCO57_RS10170;product=DUF5680 domain-containing protein;protein_id=WP_000829719.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 188957 190000 . + . ID=gene-CCO57_RS10175;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=CCO57_RS10175;old_locus_tag=CCO57_10165 NZ_NPMC01000005.1 Protein Homology CDS 188957 190000 . + 0 ID=cds-WP_061377649.1;Parent=gene-CCO57_RS10175;Dbxref=GenBank:WP_061377649.1;Name=WP_061377649.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=CCO57_RS10175;product=quinolinate synthase NadA;protein_id=WP_061377649.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 190025 190744 . + . ID=gene-CCO57_RS10180;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=CCO57_RS10180;old_locus_tag=CCO57_10170 NZ_NPMC01000005.1 Protein Homology CDS 190025 190744 . + 0 ID=cds-WP_094914920.1;Parent=gene-CCO57_RS10180;Dbxref=GenBank:WP_094914920.1;Name=WP_094914920.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=CCO57_RS10180;product=nicotinamide riboside transporter PnuC;protein_id=WP_094914920.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 190741 191679 . - . ID=gene-CCO57_RS10185;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=CCO57_RS10185;old_locus_tag=CCO57_10175 NZ_NPMC01000005.1 Protein Homology CDS 190741 191679 . - 0 ID=cds-WP_000951250.1;Parent=gene-CCO57_RS10185;Dbxref=GenBank:WP_000951250.1;Name=WP_000951250.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=CCO57_RS10185;product=CDF family zinc transporter ZitB;protein_id=WP_000951250.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 191790 192176 . - . ID=gene-CCO57_RS10190;Name=CCO57_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10190;old_locus_tag=CCO57_10180 NZ_NPMC01000005.1 Protein Homology CDS 191790 192176 . - 0 ID=cds-WP_000784380.1;Parent=gene-CCO57_RS10190;Dbxref=GenBank:WP_000784380.1;Name=WP_000784380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=CCO57_RS10190;product=YbgS-like family protein;protein_id=WP_000784380.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 192496 193548 . + . ID=gene-CCO57_RS10195;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=CCO57_RS10195;old_locus_tag=CCO57_10185 NZ_NPMC01000005.1 Protein Homology CDS 192496 193548 . + 0 ID=cds-WP_001528822.1;Parent=gene-CCO57_RS10195;Dbxref=GenBank:WP_001528822.1;Name=WP_001528822.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=CCO57_RS10195;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001528822.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 193703 194782 . + . ID=gene-CCO57_RS10200;Name=CCO57_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10200;old_locus_tag=CCO57_10190 NZ_NPMC01000005.1 Protein Homology CDS 193703 194782 . + 0 ID=cds-WP_094914921.1;Parent=gene-CCO57_RS10200;Dbxref=GenBank:WP_094914921.1;Name=WP_094914921.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=CCO57_RS10200;product=FecCD family ABC transporter permease;protein_id=WP_094914921.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 194782 195558 . + . ID=gene-CCO57_RS10205;Name=CCO57_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10205;old_locus_tag=CCO57_10195 NZ_NPMC01000005.1 Protein Homology CDS 194782 195558 . + 0 ID=cds-WP_080177320.1;Parent=gene-CCO57_RS10205;Dbxref=GenBank:WP_080177320.1;Name=WP_080177320.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=CCO57_RS10205;product=ABC transporter ATP-binding protein;protein_id=WP_080177320.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 195649 196401 . - . ID=gene-CCO57_RS10210;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=CCO57_RS10210;old_locus_tag=CCO57_10200 NZ_NPMC01000005.1 Protein Homology CDS 195649 196401 . - 0 ID=cds-WP_000301554.1;Parent=gene-CCO57_RS10210;Dbxref=GenBank:WP_000301554.1;Name=WP_000301554.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=CCO57_RS10210;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301554.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 196625 197665 . - . ID=gene-CCO57_RS10220;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=CCO57_RS10220;old_locus_tag=CCO57_10210 NZ_NPMC01000005.1 Protein Homology CDS 196625 197665 . - 0 ID=cds-WP_000931428.1;Parent=gene-CCO57_RS10220;Dbxref=GenBank:WP_000931428.1;Name=WP_000931428.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=CCO57_RS10220;product=galactose-1-epimerase;protein_id=WP_000931428.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 197659 198807 . - . ID=gene-CCO57_RS10225;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CCO57_RS10225;old_locus_tag=CCO57_10215 NZ_NPMC01000005.1 Protein Homology CDS 197659 198807 . - 0 ID=cds-WP_001049366.1;Parent=gene-CCO57_RS10225;Dbxref=GenBank:WP_001049366.1;Name=WP_001049366.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=CCO57_RS10225;product=galactokinase;protein_id=WP_001049366.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 198810 199856 . - . ID=gene-CCO57_RS10230;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CCO57_RS10230;old_locus_tag=CCO57_10220 NZ_NPMC01000005.1 Protein Homology CDS 198810 199856 . - 0 ID=cds-WP_080167249.1;Parent=gene-CCO57_RS10230;Dbxref=GenBank:WP_080167249.1;Name=WP_080167249.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=CCO57_RS10230;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_080167249.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 199867 200883 . - . ID=gene-CCO57_RS10235;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CCO57_RS10235;old_locus_tag=CCO57_10225 NZ_NPMC01000005.1 Protein Homology CDS 199867 200883 . - 0 ID=cds-WP_001265465.1;Parent=gene-CCO57_RS10235;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=CCO57_RS10235;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 201106 202014 . - . ID=gene-CCO57_RS10240;Name=CCO57_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10240;old_locus_tag=CCO57_10230 NZ_NPMC01000005.1 Protein Homology CDS 201106 202014 . - 0 ID=cds-WP_000885519.1;Parent=gene-CCO57_RS10240;Dbxref=GenBank:WP_000885519.1;Name=WP_000885519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=CCO57_RS10240;product=DUF2167 domain-containing protein;protein_id=WP_000885519.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 202185 203660 . - . ID=gene-CCO57_RS10245;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=CCO57_RS10245;old_locus_tag=CCO57_10235 NZ_NPMC01000005.1 Protein Homology CDS 202185 203660 . - 0 ID=cds-WP_094914922.1;Parent=gene-CCO57_RS10245;Dbxref=GenBank:WP_094914922.1;Name=WP_094914922.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=CCO57_RS10245;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_094914922.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 203728 204516 . - . ID=gene-CCO57_RS10255;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=CCO57_RS10255;old_locus_tag=CCO57_10245 NZ_NPMC01000005.1 Protein Homology CDS 203728 204516 . - 0 ID=cds-WP_001147416.1;Parent=gene-CCO57_RS10255;Dbxref=GenBank:WP_001147416.1;Name=WP_001147416.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=CCO57_RS10255;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147416.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 204645 204794 . + . ID=gene-CCO57_RS10260;Name=CCO57_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10260;old_locus_tag=CCO57_10250 NZ_NPMC01000005.1 Protein Homology CDS 204645 204794 . + 0 ID=cds-WP_000891513.1;Parent=gene-CCO57_RS10260;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=CCO57_RS10260;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 204961 205734 . + . ID=gene-CCO57_RS10265;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CCO57_RS10265;old_locus_tag=CCO57_10255 NZ_NPMC01000005.1 Protein Homology CDS 204961 205734 . + 0 ID=cds-WP_094914923.1;Parent=gene-CCO57_RS10265;Dbxref=GenBank:WP_094914923.1;Name=WP_094914923.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=CCO57_RS10265;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_094914923.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 205734 206423 . + . ID=gene-CCO57_RS10270;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CCO57_RS10270;old_locus_tag=CCO57_10260 NZ_NPMC01000005.1 Protein Homology CDS 205734 206423 . + 0 ID=cds-WP_000604026.1;Parent=gene-CCO57_RS10270;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=CCO57_RS10270;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 206426 207484 . + . ID=gene-CCO57_RS10275;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=CCO57_RS10275;old_locus_tag=CCO57_10265 NZ_NPMC01000005.1 Protein Homology CDS 206426 207484 . + 0 ID=cds-WP_094914924.1;Parent=gene-CCO57_RS10275;Dbxref=GenBank:WP_094914924.1;Name=WP_094914924.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=CCO57_RS10275;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_094914924.1;transl_table=11 NZ_NPMC01000005.1 RefSeq pseudogene 207485 207640 . - . ID=gene-CCO57_RS10280;Name=CCO57_RS10280;end_range=207640,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS10280;old_locus_tag=CCO57_10270;partial=true;pseudo=true NZ_NPMC01000005.1 Protein Homology CDS 207485 207640 . - 0 ID=cds-CCO57_RS10280;Parent=gene-CCO57_RS10280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=207640,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=CCO57_RS10280;partial=true;product=HAD hydrolase family protein;pseudo=true;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 208014 208343 . - . ID=gene-CCO57_RS10285;Name=CCO57_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10285;old_locus_tag=CCO57_10275 NZ_NPMC01000005.1 Protein Homology CDS 208014 208343 . - 0 ID=cds-WP_077912235.1;Parent=gene-CCO57_RS10285;Dbxref=GenBank:WP_077912235.1;Name=WP_077912235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=CCO57_RS10285;product=DUF1493 family protein;protein_id=WP_077912235.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 208328 208789 . - . ID=gene-CCO57_RS24945;Name=CCO57_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24945 NZ_NPMC01000005.1 Protein Homology CDS 208328 208789 . - 0 ID=cds-WP_024151559.1;Parent=gene-CCO57_RS24945;Dbxref=GenBank:WP_024151559.1;Name=WP_024151559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154057295.1;locus_tag=CCO57_RS24945;product=STM2901 family protein;protein_id=WP_024151559.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 208920 209084 . - . ID=gene-CCO57_RS24310;Name=CCO57_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24310 NZ_NPMC01000005.1 GeneMarkS-2+ CDS 208920 209084 . - 0 ID=cds-WP_023139965.1;Parent=gene-CCO57_RS24310;Dbxref=GenBank:WP_023139965.1;Name=WP_023139965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24310;product=hypothetical protein;protein_id=WP_023139965.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 209107 209943 . - . ID=gene-CCO57_RS10300;Name=CCO57_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10300;old_locus_tag=CCO57_10290 NZ_NPMC01000005.1 Protein Homology CDS 209107 209943 . - 0 ID=cds-WP_001109271.1;Parent=gene-CCO57_RS10300;Dbxref=GenBank:WP_001109271.1;Name=WP_001109271.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109271.1;locus_tag=CCO57_RS10300;product=pyridoxal phosphatase;protein_id=WP_001109271.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 210068 210223 . - . ID=gene-CCO57_RS10305;Name=CCO57_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10305;old_locus_tag=CCO57_10295 NZ_NPMC01000005.1 GeneMarkS-2+ CDS 210068 210223 . - 0 ID=cds-WP_370694610.1;Parent=gene-CCO57_RS10305;Dbxref=GenBank:WP_370694610.1;Name=WP_370694610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS10305;product=HAD hydrolase family protein;protein_id=WP_370694610.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 210387 211382 . + . ID=gene-CCO57_RS10310;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=CCO57_RS10310;old_locus_tag=CCO57_10300 NZ_NPMC01000005.1 Protein Homology CDS 210387 211382 . + 0 ID=cds-WP_000815468.1;Parent=gene-CCO57_RS10310;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=CCO57_RS10310;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 211506 212789 . - . ID=gene-CCO57_RS10315;Name=CCO57_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10315;old_locus_tag=CCO57_10305 NZ_NPMC01000005.1 Protein Homology CDS 211506 212789 . - 0 ID=cds-WP_001094764.1;Parent=gene-CCO57_RS10315;Dbxref=GenBank:WP_001094764.1;Name=WP_001094764.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=CCO57_RS10315;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094764.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 213027 214250 . + . ID=gene-CCO57_RS10320;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CCO57_RS10320;old_locus_tag=CCO57_10310 NZ_NPMC01000005.1 Protein Homology CDS 213027 214250 . + 0 ID=cds-WP_001249490.1;Parent=gene-CCO57_RS10320;Dbxref=GenBank:WP_001249490.1;Name=WP_001249490.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=CCO57_RS10320;product=imidazolonepropionase;protein_id=WP_001249490.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 214247 215188 . + . ID=gene-CCO57_RS10325;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CCO57_RS10325;old_locus_tag=CCO57_10315 NZ_NPMC01000005.1 Protein Homology CDS 214247 215188 . + 0 ID=cds-WP_031570039.1;Parent=gene-CCO57_RS10325;Dbxref=GenBank:WP_031570039.1;Name=WP_031570039.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=CCO57_RS10325;product=formimidoylglutamase;protein_id=WP_031570039.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 215233 215958 . + . ID=gene-CCO57_RS10330;Name=CCO57_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10330;old_locus_tag=CCO57_10320 NZ_NPMC01000005.1 Protein Homology CDS 215233 215958 . + 0 ID=cds-WP_000287407.1;Parent=gene-CCO57_RS10330;Dbxref=GenBank:WP_000287407.1;Name=WP_000287407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=CCO57_RS10330;product=histidine utilization repressor;protein_id=WP_000287407.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 216155 217846 . + . ID=gene-CCO57_RS10335;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CCO57_RS10335;old_locus_tag=CCO57_10325 NZ_NPMC01000005.1 Protein Homology CDS 216155 217846 . + 0 ID=cds-WP_001115216.1;Parent=gene-CCO57_RS10335;Dbxref=GenBank:WP_001115216.1;Name=WP_001115216.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001115216.1;locus_tag=CCO57_RS10335;product=urocanate hydratase;protein_id=WP_001115216.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 217843 219363 . + . ID=gene-CCO57_RS10340;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CCO57_RS10340;old_locus_tag=CCO57_10330 NZ_NPMC01000005.1 Protein Homology CDS 217843 219363 . + 0 ID=cds-WP_023136835.1;Parent=gene-CCO57_RS10340;Dbxref=GenBank:WP_023136835.1;Name=WP_023136835.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=CCO57_RS10340;product=histidine ammonia-lyase;protein_id=WP_023136835.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 219448 219924 . - . ID=gene-CCO57_RS10345;Name=CCO57_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10345;old_locus_tag=CCO57_10335 NZ_NPMC01000005.1 Protein Homology CDS 219448 219924 . - 0 ID=cds-WP_023136836.1;Parent=gene-CCO57_RS10345;Dbxref=GenBank:WP_023136836.1;Name=WP_023136836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=CCO57_RS10345;product=kinase inhibitor;protein_id=WP_023136836.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 219982 221271 . - . ID=gene-CCO57_RS10350;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CCO57_RS10350;old_locus_tag=CCO57_10340 NZ_NPMC01000005.1 Protein Homology CDS 219982 221271 . - 0 ID=cds-WP_001611216.1;Parent=gene-CCO57_RS10350;Dbxref=GenBank:WP_001611216.1;Name=WP_001611216.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=CCO57_RS10350;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_001611216.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 221358 222398 . + . ID=gene-CCO57_RS10355;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CCO57_RS10355;old_locus_tag=CCO57_10345 NZ_NPMC01000005.1 Protein Homology CDS 221358 222398 . + 0 ID=cds-WP_000090727.1;Parent=gene-CCO57_RS10355;Dbxref=GenBank:WP_000090727.1;Name=WP_000090727.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=CCO57_RS10355;product=biotin synthase BioB;protein_id=WP_000090727.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 222395 223552 . + . ID=gene-CCO57_RS10360;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=CCO57_RS10360;old_locus_tag=CCO57_10350 NZ_NPMC01000005.1 Protein Homology CDS 222395 223552 . + 0 ID=cds-WP_023212643.1;Parent=gene-CCO57_RS10360;Dbxref=GenBank:WP_023212643.1;Name=WP_023212643.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=CCO57_RS10360;product=8-amino-7-oxononanoate synthase;protein_id=WP_023212643.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 223536 224291 . + . ID=gene-CCO57_RS10365;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=CCO57_RS10365;old_locus_tag=CCO57_10355 NZ_NPMC01000005.1 Protein Homology CDS 223536 224291 . + 0 ID=cds-WP_000079908.1;Parent=gene-CCO57_RS10365;Dbxref=GenBank:WP_000079908.1;Name=WP_000079908.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=CCO57_RS10365;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079908.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 224284 224970 . + . ID=gene-CCO57_RS10370;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO57_RS10370;old_locus_tag=CCO57_10360 NZ_NPMC01000005.1 Protein Homology CDS 224284 224970 . + 0 ID=cds-WP_000167212.1;Parent=gene-CCO57_RS10370;Dbxref=GenBank:WP_000167212.1;Name=WP_000167212.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=CCO57_RS10370;product=dethiobiotin synthase;protein_id=WP_000167212.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 225621 227642 . + . ID=gene-CCO57_RS10380;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CCO57_RS10380;old_locus_tag=CCO57_10370 NZ_NPMC01000005.1 Protein Homology CDS 225621 227642 . + 0 ID=cds-WP_031570028.1;Parent=gene-CCO57_RS10380;Dbxref=GenBank:WP_031570028.1;Name=WP_031570028.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=CCO57_RS10380;product=excinuclease ABC subunit UvrB;protein_id=WP_031570028.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 227950 228123 . + . ID=gene-CCO57_RS10385;Name=CCO57_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10385;old_locus_tag=CCO57_10375 NZ_NPMC01000005.1 Protein Homology CDS 227950 228123 . + 0 ID=cds-WP_001563585.1;Parent=gene-CCO57_RS10385;Dbxref=GenBank:WP_001563585.1;Name=WP_001563585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=CCO57_RS10385;product=hypothetical protein;protein_id=WP_001563585.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 228131 230398 . + . ID=gene-CCO57_RS10390;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=CCO57_RS10390;old_locus_tag=CCO57_10380 NZ_NPMC01000005.1 Protein Homology CDS 228131 230398 . + 0 ID=cds-WP_000482002.1;Parent=gene-CCO57_RS10390;Dbxref=GenBank:WP_000482002.1;Name=WP_000482002.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=CCO57_RS10390;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_000482002.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 230490 231398 . - . ID=gene-CCO57_RS10395;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=CCO57_RS10395;old_locus_tag=CCO57_10385 NZ_NPMC01000005.1 Protein Homology CDS 230490 231398 . - 0 ID=cds-WP_001246031.1;Parent=gene-CCO57_RS10395;Dbxref=GenBank:WP_001246031.1;Name=WP_001246031.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=CCO57_RS10395;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246031.1;transl_table=11 NZ_NPMC01000005.1 cmsearch riboswitch 231663 231807 . + . ID=id-NZ_NPMC01000005.1:231663..231807;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMC01000005.1 RefSeq gene 231795 232784 . + . ID=gene-CCO57_RS10400;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CCO57_RS10400;old_locus_tag=CCO57_10390 NZ_NPMC01000005.1 Protein Homology CDS 231795 232784 . + 0 ID=cds-WP_000168180.1;Parent=gene-CCO57_RS10400;Dbxref=GenBank:WP_000168180.1;Name=WP_000168180.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=CCO57_RS10400;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168180.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 232806 233318 . + . ID=gene-CCO57_RS10405;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=CCO57_RS10405;old_locus_tag=CCO57_10395 NZ_NPMC01000005.1 Protein Homology CDS 232806 233318 . + 0 ID=cds-WP_000084604.1;Parent=gene-CCO57_RS10405;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=CCO57_RS10405;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 233321 233806 . + . ID=gene-CCO57_RS10410;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CCO57_RS10410;old_locus_tag=CCO57_10400 NZ_NPMC01000005.1 Protein Homology CDS 233321 233806 . + 0 ID=cds-WP_000080894.1;Parent=gene-CCO57_RS10410;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=CCO57_RS10410;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 233799 234044 . + . ID=gene-CCO57_RS10415;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=CCO57_RS10415;old_locus_tag=CCO57_10405 NZ_NPMC01000005.1 Protein Homology CDS 233799 234044 . + 0 ID=cds-WP_000598596.1;Parent=gene-CCO57_RS10415;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=CCO57_RS10415;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 234046 234498 . + . ID=gene-CCO57_RS10420;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=CCO57_RS10420;old_locus_tag=CCO57_10410 NZ_NPMC01000005.1 Protein Homology CDS 234046 234498 . + 0 ID=cds-WP_000545204.1;Parent=gene-CCO57_RS10420;Dbxref=GenBank:WP_000545204.1;Name=WP_000545204.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=CCO57_RS10420;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000545204.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 234546 235250 . + . ID=gene-CCO57_RS10425;Name=CCO57_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10425;old_locus_tag=CCO57_10415 NZ_NPMC01000005.1 Protein Homology CDS 234546 235250 . + 0 ID=cds-WP_000373611.1;Parent=gene-CCO57_RS10425;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=CCO57_RS10425;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 235396 236103 . + . ID=gene-CCO57_RS10435;Name=CCO57_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10435;old_locus_tag=CCO57_10425 NZ_NPMC01000005.1 Protein Homology CDS 235396 236103 . + 0 ID=cds-WP_000529072.1;Parent=gene-CCO57_RS10435;Dbxref=GenBank:WP_000529072.1;Name=WP_000529072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=CCO57_RS10435;product=Bax inhibitor-1 family protein;protein_id=WP_000529072.1;transl_table=11 NZ_NPMC01000005.1 RefSeq pseudogene 236127 236360 . + . ID=gene-CCO57_RS24570;Name=CCO57_RS24570;end_range=236360,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24570;old_locus_tag=CCO57_10430;partial=true;pseudo=true NZ_NPMC01000005.1 Protein Homology CDS 236127 236360 . + 0 ID=cds-CCO57_RS24570;Parent=gene-CCO57_RS24570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=236360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=CCO57_RS24570;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000005.1 RefSeq pseudogene 236287 236535 . + . ID=gene-CCO57_RS10445;Name=CCO57_RS10445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS10445;old_locus_tag=CCO57_10435;partial=true;pseudo=true;start_range=.,236287 NZ_NPMC01000005.1 Protein Homology CDS 236287 236535 . + 0 ID=cds-CCO57_RS10445;Parent=gene-CCO57_RS10445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=CCO57_RS10445;partial=true;product=hypothetical protein;pseudo=true;start_range=.,236287;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 236538 237500 . - . ID=gene-CCO57_RS10450;Name=CCO57_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10450;old_locus_tag=CCO57_10440 NZ_NPMC01000005.1 Protein Homology CDS 236538 237500 . - 0 ID=cds-WP_001129824.1;Parent=gene-CCO57_RS10450;Dbxref=GenBank:WP_001129824.1;Name=WP_001129824.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=CCO57_RS10450;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_001129824.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 237500 238741 . - . ID=gene-CCO57_RS10455;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=CCO57_RS10455;old_locus_tag=CCO57_10445 NZ_NPMC01000005.1 Protein Homology CDS 237500 238741 . - 0 ID=cds-WP_000649639.1;Parent=gene-CCO57_RS10455;Dbxref=GenBank:WP_000649639.1;Name=WP_000649639.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=CCO57_RS10455;product=cardiolipin synthase ClsB;protein_id=WP_000649639.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 238738 239496 . - . ID=gene-CCO57_RS10460;Name=CCO57_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10460;old_locus_tag=CCO57_10450 NZ_NPMC01000005.1 Protein Homology CDS 238738 239496 . - 0 ID=cds-WP_000192039.1;Parent=gene-CCO57_RS10460;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=CCO57_RS10460;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 239629 240039 . + . ID=gene-CCO57_RS10465;Name=CCO57_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10465;old_locus_tag=CCO57_10455 NZ_NPMC01000005.1 Protein Homology CDS 239629 240039 . + 0 ID=cds-WP_000871970.1;Parent=gene-CCO57_RS10465;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=CCO57_RS10465;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 240001 241107 . - . ID=gene-CCO57_RS10470;Name=CCO57_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10470;old_locus_tag=CCO57_10460 NZ_NPMC01000005.1 Protein Homology CDS 240001 241107 . - 0 ID=cds-WP_000469050.1;Parent=gene-CCO57_RS10470;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=CCO57_RS10470;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 241223 242353 . - . ID=gene-CCO57_RS10475;Name=CCO57_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10475;old_locus_tag=CCO57_10465 NZ_NPMC01000005.1 Protein Homology CDS 241223 242353 . - 0 ID=cds-WP_000045765.1;Parent=gene-CCO57_RS10475;Dbxref=GenBank:WP_000045765.1;Name=WP_000045765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=CCO57_RS10475;product=ABC transporter permease;protein_id=WP_000045765.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 242346 244082 . - . ID=gene-CCO57_RS10480;Name=CCO57_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10480;old_locus_tag=CCO57_10470 NZ_NPMC01000005.1 Protein Homology CDS 242346 244082 . - 0 ID=cds-WP_001287609.1;Parent=gene-CCO57_RS10480;Dbxref=GenBank:WP_001287609.1;Name=WP_001287609.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=CCO57_RS10480;product=ATP-binding cassette domain-containing protein;protein_id=WP_001287609.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 244075 245070 . - . ID=gene-CCO57_RS10485;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=CCO57_RS10485;old_locus_tag=CCO57_10475 NZ_NPMC01000005.1 Protein Homology CDS 244075 245070 . - 0 ID=cds-WP_000743431.1;Parent=gene-CCO57_RS10485;Dbxref=GenBank:WP_000743431.1;Name=WP_000743431.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=CCO57_RS10485;product=secretion protein HlyD;protein_id=WP_000743431.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 245070 245744 . - . ID=gene-CCO57_RS10490;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=CCO57_RS10490;old_locus_tag=CCO57_10480 NZ_NPMC01000005.1 Protein Homology CDS 245070 245744 . - 0 ID=cds-WP_001025260.1;Parent=gene-CCO57_RS10490;Dbxref=GenBank:WP_001025260.1;Name=WP_001025260.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=CCO57_RS10490;product=transcriptional regulator CecR;protein_id=WP_001025260.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 245974 247335 . + . ID=gene-CCO57_RS10495;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=CCO57_RS10495;old_locus_tag=CCO57_10485 NZ_NPMC01000005.1 Protein Homology CDS 245974 247335 . + 0 ID=cds-WP_000007065.1;Parent=gene-CCO57_RS10495;Dbxref=GenBank:WP_000007065.1;Name=WP_000007065.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=CCO57_RS10495;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007065.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 247543 249687 . + . ID=gene-CCO57_RS10500;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=CCO57_RS10500;old_locus_tag=CCO57_10490 NZ_NPMC01000005.1 Protein Homology CDS 247543 249687 . + 0 ID=cds-WP_001218626.1;Parent=gene-CCO57_RS10500;Dbxref=GenBank:WP_001218626.1;Name=WP_001218626.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=CCO57_RS10500;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218626.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 249717 250691 . + . ID=gene-CCO57_RS10505;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=CCO57_RS10505;old_locus_tag=CCO57_10495 NZ_NPMC01000005.1 Protein Homology CDS 249717 250691 . + 0 ID=cds-WP_023230665.1;Parent=gene-CCO57_RS10505;Dbxref=GenBank:WP_023230665.1;Name=WP_023230665.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=CCO57_RS10505;product=DNA-binding protein YbiB;protein_id=WP_023230665.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 250849 251109 . - . ID=gene-CCO57_RS10510;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=CCO57_RS10510;old_locus_tag=CCO57_10500 NZ_NPMC01000005.1 Protein Homology CDS 250849 251109 . - 0 ID=cds-WP_000849089.1;Parent=gene-CCO57_RS10510;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=CCO57_RS10510;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 251394 251660 . - . ID=gene-CCO57_RS10515;Name=CCO57_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10515;old_locus_tag=CCO57_10505 NZ_NPMC01000005.1 Protein Homology CDS 251394 251660 . - 0 ID=cds-WP_000146332.1;Parent=gene-CCO57_RS10515;Dbxref=GenBank:WP_000146332.1;Name=WP_000146332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=CCO57_RS10515;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146332.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 251865 252791 . + . ID=gene-CCO57_RS10520;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=CCO57_RS10520;old_locus_tag=CCO57_10510 NZ_NPMC01000005.1 Protein Homology CDS 251865 252791 . + 0 ID=cds-WP_001275964.1;Parent=gene-CCO57_RS10520;Dbxref=GenBank:WP_001275964.1;Name=WP_001275964.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=CCO57_RS10520;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275964.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 252788 255010 . - . ID=gene-CCO57_RS10525;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=CCO57_RS10525;old_locus_tag=CCO57_10515 NZ_NPMC01000005.1 Protein Homology CDS 252788 255010 . - 0 ID=cds-WP_094914925.1;Parent=gene-CCO57_RS10525;Dbxref=GenBank:WP_094914925.1;Name=WP_094914925.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=CCO57_RS10525;product=mechanosensitive channel protein;protein_id=WP_094914925.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 255129 255851 . - . ID=gene-CCO57_RS10530;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=CCO57_RS10530;old_locus_tag=CCO57_10520 NZ_NPMC01000005.1 Protein Homology CDS 255129 255851 . - 0 ID=cds-WP_023137167.1;Parent=gene-CCO57_RS10530;Dbxref=GenBank:WP_023137167.1;Name=WP_023137167.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=CCO57_RS10530;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_023137167.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 255848 256507 . - . ID=gene-CCO57_RS10535;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=CCO57_RS10535;old_locus_tag=CCO57_10525 NZ_NPMC01000005.1 Protein Homology CDS 255848 256507 . - 0 ID=cds-WP_001159076.1;Parent=gene-CCO57_RS10535;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=CCO57_RS10535;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 256653 257399 . - . ID=gene-CCO57_RS10540;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=CCO57_RS10540;old_locus_tag=CCO57_10530 NZ_NPMC01000005.1 Protein Homology CDS 256653 257399 . - 0 ID=cds-WP_094914926.1;Parent=gene-CCO57_RS10540;Dbxref=GenBank:WP_094914926.1;Name=WP_094914926.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=CCO57_RS10540;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_094914926.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 257876 258379 . - . ID=gene-CCO57_RS10545;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=CCO57_RS10545;old_locus_tag=CCO57_10535 NZ_NPMC01000005.1 Protein Homology CDS 257876 258379 . - 0 ID=cds-WP_000100805.1;Parent=gene-CCO57_RS10545;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=CCO57_RS10545;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 258682 259569 . - . ID=gene-CCO57_RS10550;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=CCO57_RS10550;old_locus_tag=CCO57_10540 NZ_NPMC01000005.1 Protein Homology CDS 258682 259569 . - 0 ID=cds-WP_001119555.1;Parent=gene-CCO57_RS10550;Dbxref=GenBank:WP_001119555.1;Name=WP_001119555.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=CCO57_RS10550;product=threonine/homoserine exporter RhtA;protein_id=WP_001119555.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 259923 260438 . + . ID=gene-CCO57_RS10555;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=CCO57_RS10555;old_locus_tag=CCO57_10545 NZ_NPMC01000005.1 Protein Homology CDS 259923 260438 . + 0 ID=cds-WP_000716763.1;Parent=gene-CCO57_RS10555;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=CCO57_RS10555;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 260501 262081 . - . ID=gene-CCO57_RS10560;Name=CCO57_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10560;old_locus_tag=CCO57_10550 NZ_NPMC01000005.1 Protein Homology CDS 260501 262081 . - 0 ID=cds-WP_023137168.1;Parent=gene-CCO57_RS10560;Dbxref=GenBank:WP_023137168.1;Name=WP_023137168.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=CCO57_RS10560;product=phosphoethanolamine transferase;protein_id=WP_023137168.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 262346 262474 . - . ID=gene-CCO57_RS10565;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=CCO57_RS10565;old_locus_tag=CCO57_10555 NZ_NPMC01000005.1 Protein Homology CDS 262346 262474 . - 0 ID=cds-WP_001001755.1;Parent=gene-CCO57_RS10565;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=CCO57_RS10565;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 262660 263133 . + . ID=gene-CCO57_RS10570;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=CCO57_RS10570;old_locus_tag=CCO57_10560 NZ_NPMC01000005.1 Protein Homology CDS 262660 263133 . + 0 ID=cds-WP_000533542.1;Parent=gene-CCO57_RS10570;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=CCO57_RS10570;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 263130 264242 . + . ID=gene-CCO57_RS10575;Name=CCO57_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10575;old_locus_tag=CCO57_10565 NZ_NPMC01000005.1 Protein Homology CDS 263130 264242 . + 0 ID=cds-WP_001046525.1;Parent=gene-CCO57_RS10575;Dbxref=GenBank:WP_001046525.1;Name=WP_001046525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=CCO57_RS10575;product=anion transporter;protein_id=WP_001046525.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 264286 265206 . - . ID=gene-CCO57_RS10580;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=CCO57_RS10580;old_locus_tag=CCO57_10570 NZ_NPMC01000005.1 Protein Homology CDS 264286 265206 . - 0 ID=cds-WP_001056401.1;Parent=gene-CCO57_RS10580;Dbxref=GenBank:WP_001056401.1;Name=WP_001056401.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=CCO57_RS10580;product=L%2CD-transpeptidase;protein_id=WP_001056401.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 265425 267020 . + . ID=gene-CCO57_RS10585;Name=CCO57_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10585;old_locus_tag=CCO57_10575 NZ_NPMC01000005.1 Protein Homology CDS 265425 267020 . + 0 ID=cds-WP_000961434.1;Parent=gene-CCO57_RS10585;Dbxref=GenBank:WP_000961434.1;Name=WP_000961434.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=CCO57_RS10585;product=ABC-F family ATPase;protein_id=WP_000961434.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 267142 268407 . - . ID=gene-CCO57_RS10590;Name=CCO57_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10590;old_locus_tag=CCO57_10580 NZ_NPMC01000005.1 Protein Homology CDS 267142 268407 . - 0 ID=cds-WP_000210949.1;Parent=gene-CCO57_RS10590;Dbxref=GenBank:WP_000210949.1;Name=WP_000210949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=CCO57_RS10590;product=DUF1479 domain-containing protein;protein_id=WP_000210949.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 268669 269478 . + . ID=gene-CCO57_RS10595;Name=CCO57_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10595;old_locus_tag=CCO57_10585 NZ_NPMC01000005.1 Protein Homology CDS 268669 269478 . + 0 ID=cds-WP_000217910.1;Parent=gene-CCO57_RS10595;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=CCO57_RS10595;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 269556 271988 . - . ID=gene-CCO57_RS10600;Name=CCO57_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10600;old_locus_tag=CCO57_10590 NZ_NPMC01000005.1 Protein Homology CDS 269556 271988 . - 0 ID=cds-WP_023137169.1;Parent=gene-CCO57_RS10600;Dbxref=GenBank:WP_023137169.1;Name=WP_023137169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=CCO57_RS10600;product=glycyl radical protein;protein_id=WP_023137169.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 271994 272893 . - . ID=gene-CCO57_RS10605;Name=CCO57_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10605;old_locus_tag=CCO57_10595 NZ_NPMC01000005.1 Protein Homology CDS 271994 272893 . - 0 ID=cds-WP_000576947.1;Parent=gene-CCO57_RS10605;Dbxref=GenBank:WP_000576947.1;Name=WP_000576947.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=CCO57_RS10605;product=glycyl-radical enzyme activating protein;protein_id=WP_000576947.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 273171 273920 . - . ID=gene-CCO57_RS10610;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=CCO57_RS10610;old_locus_tag=CCO57_10600 NZ_NPMC01000005.1 Protein Homology CDS 273171 273920 . - 0 ID=cds-WP_000829283.1;Parent=gene-CCO57_RS10610;Dbxref=GenBank:WP_000829283.1;Name=WP_000829283.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=CCO57_RS10610;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829283.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 273920 275155 . - . ID=gene-CCO57_RS10615;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=CCO57_RS10615;old_locus_tag=CCO57_10605 NZ_NPMC01000005.1 Protein Homology CDS 273920 275155 . - 0 ID=cds-WP_000395792.1;Parent=gene-CCO57_RS10615;Dbxref=GenBank:WP_000395792.1;Name=WP_000395792.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=CCO57_RS10615;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000395792.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 275359 276300 . + . ID=gene-CCO57_RS10620;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=CCO57_RS10620;old_locus_tag=CCO57_10610 NZ_NPMC01000005.1 Protein Homology CDS 275359 276300 . + 0 ID=cds-WP_001030503.1;Parent=gene-CCO57_RS10620;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=CCO57_RS10620;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 276311 278182 . + . ID=gene-CCO57_RS10625;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=CCO57_RS10625;old_locus_tag=CCO57_10615 NZ_NPMC01000005.1 Protein Homology CDS 276311 278182 . + 0 ID=cds-WP_001120575.1;Parent=gene-CCO57_RS10625;Dbxref=GenBank:WP_001120575.1;Name=WP_001120575.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=CCO57_RS10625;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120575.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 278215 279753 . + . ID=gene-CCO57_RS10630;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=CCO57_RS10630;old_locus_tag=CCO57_10620 NZ_NPMC01000005.1 Protein Homology CDS 278215 279753 . + 0 ID=cds-WP_000191439.1;Parent=gene-CCO57_RS10630;Dbxref=GenBank:WP_000191439.1;Name=WP_000191439.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=CCO57_RS10630;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191439.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 279814 280734 . + . ID=gene-CCO57_RS10635;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=CCO57_RS10635;old_locus_tag=CCO57_10625 NZ_NPMC01000005.1 Protein Homology CDS 279814 280734 . + 0 ID=cds-WP_000936066.1;Parent=gene-CCO57_RS10635;Dbxref=GenBank:WP_000936066.1;Name=WP_000936066.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=CCO57_RS10635;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936066.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 280737 281648 . + . ID=gene-CCO57_RS10640;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=CCO57_RS10640;old_locus_tag=CCO57_10630 NZ_NPMC01000005.1 Protein Homology CDS 280737 281648 . + 0 ID=cds-WP_001236024.1;Parent=gene-CCO57_RS10640;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=CCO57_RS10640;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 281739 283064 . - . ID=gene-CCO57_RS10645;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CCO57_RS10645;old_locus_tag=CCO57_10635 NZ_NPMC01000005.1 Protein Homology CDS 281739 283064 . - 0 ID=cds-WP_000073314.1;Parent=gene-CCO57_RS10645;Dbxref=GenBank:WP_000073314.1;Name=WP_000073314.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=CCO57_RS10645;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073314.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 283295 283678 . + . ID=gene-CCO57_RS10650;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=CCO57_RS10650;old_locus_tag=CCO57_10640 NZ_NPMC01000005.1 Protein Homology CDS 283295 283678 . + 0 ID=cds-WP_000259651.1;Parent=gene-CCO57_RS10650;Dbxref=GenBank:WP_000259651.1;Name=WP_000259651.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=CCO57_RS10650;product=biofilm formation regulator BssR;protein_id=WP_000259651.1;transl_table=11 NZ_NPMC01000005.1 RefSeq pseudogene 283781 284066 . + . ID=gene-CCO57_RS24575;Name=CCO57_RS24575;end_range=284066,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24575;old_locus_tag=CCO57_10645;partial=true;pseudo=true NZ_NPMC01000005.1 Protein Homology CDS 283781 284066 . + 0 ID=cds-CCO57_RS24575;Parent=gene-CCO57_RS24575;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=284066,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=CCO57_RS24575;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 284392 284913 . + . ID=gene-CCO57_RS10660;Name=CCO57_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10660;old_locus_tag=CCO57_10650 NZ_NPMC01000005.1 Protein Homology CDS 284392 284913 . + 0 ID=cds-WP_079962481.1;Parent=gene-CCO57_RS10660;Dbxref=GenBank:WP_079962481.1;Name=WP_079962481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=CCO57_RS10660;product=STM0854 family CoA ester lyase;protein_id=WP_079962481.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 284936 285685 . + . ID=gene-CCO57_RS10665;Name=CCO57_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10665;old_locus_tag=CCO57_10655 NZ_NPMC01000005.1 Protein Homology CDS 284936 285685 . + 0 ID=cds-WP_336603329.1;Parent=gene-CCO57_RS10665;Dbxref=GenBank:WP_336603329.1;Name=WP_336603329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003461132.1;locus_tag=CCO57_RS10665;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_336603329.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 285696 286649 . + . ID=gene-CCO57_RS10670;Name=CCO57_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10670;old_locus_tag=CCO57_10660 NZ_NPMC01000005.1 Protein Homology CDS 285696 286649 . + 0 ID=cds-WP_000157772.1;Parent=gene-CCO57_RS10670;Dbxref=GenBank:WP_000157772.1;Name=WP_000157772.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=CCO57_RS10670;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_000157772.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 286682 286945 . + . ID=gene-CCO57_RS10675;Name=CCO57_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10675;old_locus_tag=CCO57_10665 NZ_NPMC01000005.1 GeneMarkS-2+ CDS 286682 286945 . + 0 ID=cds-WP_001528824.1;Parent=gene-CCO57_RS10675;Dbxref=GenBank:WP_001528824.1;Name=WP_001528824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS10675;product=hypothetical protein;protein_id=WP_001528824.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 286942 288105 . + . ID=gene-CCO57_RS10680;Name=CCO57_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10680;old_locus_tag=CCO57_10670 NZ_NPMC01000005.1 Protein Homology CDS 286942 288105 . + 0 ID=cds-WP_079962467.1;Parent=gene-CCO57_RS10680;Dbxref=GenBank:WP_079962467.1;Name=WP_079962467.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=CCO57_RS10680;product=acyl-CoA dehydrogenase family protein;protein_id=WP_079962467.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 288554 290239 . + . ID=gene-CCO57_RS10690;Name=CCO57_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10690;old_locus_tag=CCO57_10680 NZ_NPMC01000005.1 Protein Homology CDS 288554 290239 . + 0 ID=cds-WP_001000306.1;Parent=gene-CCO57_RS10690;Dbxref=GenBank:WP_001000306.1;Name=WP_001000306.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=CCO57_RS10690;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_001000306.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 290245 291135 . - . ID=gene-CCO57_RS10695;Name=CCO57_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10695;old_locus_tag=CCO57_10685 NZ_NPMC01000005.1 Protein Homology CDS 290245 291135 . - 0 ID=cds-WP_000545335.1;Parent=gene-CCO57_RS10695;Dbxref=GenBank:WP_000545335.1;Name=WP_000545335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=CCO57_RS10695;product=LysR family transcriptional regulator;protein_id=WP_000545335.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 291400 291825 . - . ID=gene-CCO57_RS10700;Name=CCO57_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10700;old_locus_tag=CCO57_10690 NZ_NPMC01000005.1 Protein Homology CDS 291400 291825 . - 0 ID=cds-WP_000287110.1;Parent=gene-CCO57_RS10700;Dbxref=GenBank:WP_000287110.1;Name=WP_000287110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=CCO57_RS10700;product=GntP family permease;protein_id=WP_000287110.1;transl_table=11 NZ_NPMC01000005.1 RefSeq pseudogene 292172 292375 . + . ID=gene-CCO57_RS24950;Name=CCO57_RS24950;end_range=292375,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24950;partial=true;pseudo=true NZ_NPMC01000005.1 Protein Homology CDS 292172 292375 . + 0 ID=cds-CCO57_RS24950;Parent=gene-CCO57_RS24950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=292375,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=CCO57_RS24950;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPMC01000005.1 RefSeq pseudogene 292361 292870 . + . ID=gene-CCO57_RS24955;Name=CCO57_RS24955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24955;partial=true;pseudo=true;start_range=.,292361 NZ_NPMC01000005.1 Protein Homology CDS 292361 292870 . + 0 ID=cds-CCO57_RS24955;Parent=gene-CCO57_RS24955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000554957.1;locus_tag=CCO57_RS24955;partial=true;product=PQQ-dependent sugar dehydrogenase;pseudo=true;start_range=.,292361;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 292867 293493 . - . ID=gene-CCO57_RS10715;Name=CCO57_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10715;old_locus_tag=CCO57_10705 NZ_NPMC01000005.1 Protein Homology CDS 292867 293493 . - 0 ID=cds-WP_094914928.1;Parent=gene-CCO57_RS10715;Dbxref=GenBank:WP_094914928.1;Name=WP_094914928.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=CCO57_RS10715;product=glutathione S-transferase family protein;protein_id=WP_094914928.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 293737 294939 . + . ID=gene-CCO57_RS10720;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=CCO57_RS10720;old_locus_tag=CCO57_10710 NZ_NPMC01000005.1 Protein Homology CDS 293737 294939 . + 0 ID=cds-WP_000195710.1;Parent=gene-CCO57_RS10720;Dbxref=GenBank:WP_000195710.1;Name=WP_000195710.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=CCO57_RS10720;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195710.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 294984 295742 . - . ID=gene-CCO57_RS10725;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=CCO57_RS10725;old_locus_tag=CCO57_10715 NZ_NPMC01000005.1 Protein Homology CDS 294984 295742 . - 0 ID=cds-WP_000450106.1;Parent=gene-CCO57_RS10725;Dbxref=GenBank:WP_000450106.1;Name=WP_000450106.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=CCO57_RS10725;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450106.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 295814 296422 . - . ID=gene-CCO57_RS10730;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=CCO57_RS10730;old_locus_tag=CCO57_10720 NZ_NPMC01000005.1 Protein Homology CDS 295814 296422 . - 0 ID=cds-WP_094914931.1;Parent=gene-CCO57_RS10730;Dbxref=GenBank:WP_094914931.1;Name=WP_094914931.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=CCO57_RS10730;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_094914931.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 296735 297967 . + . ID=gene-CCO57_RS10735;Name=CCO57_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10735;old_locus_tag=CCO57_10725 NZ_NPMC01000005.1 Protein Homology CDS 296735 297967 . + 0 ID=cds-WP_001181284.1;Parent=gene-CCO57_RS10735;Dbxref=GenBank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=CCO57_RS10735;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 298021 298836 . - . ID=gene-CCO57_RS10740;Name=CCO57_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10740;old_locus_tag=CCO57_10730 NZ_NPMC01000005.1 Protein Homology CDS 298021 298836 . - 0 ID=cds-WP_000023542.1;Parent=gene-CCO57_RS10740;Dbxref=GenBank:WP_000023542.1;Name=WP_000023542.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=CCO57_RS10740;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000023542.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 298833 300044 . - . ID=gene-CCO57_RS10745;Name=CCO57_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10745;old_locus_tag=CCO57_10735 NZ_NPMC01000005.1 Protein Homology CDS 298833 300044 . - 0 ID=cds-WP_000217430.1;Parent=gene-CCO57_RS10745;Dbxref=GenBank:WP_000217430.1;Name=WP_000217430.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=CCO57_RS10745;product=MFS transporter;protein_id=WP_000217430.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 300212 300832 . + . ID=gene-CCO57_RS10750;Name=CCO57_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10750;old_locus_tag=CCO57_10740 NZ_NPMC01000005.1 Protein Homology CDS 300212 300832 . + 0 ID=cds-WP_000661873.1;Parent=gene-CCO57_RS10750;Dbxref=GenBank:WP_000661873.1;Name=WP_000661873.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=CCO57_RS10750;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661873.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 300949 302634 . - . ID=gene-CCO57_RS10760;Name=CCO57_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10760;old_locus_tag=CCO57_10745 NZ_NPMC01000005.1 Protein Homology CDS 300949 302634 . - 0 ID=cds-WP_001024853.1;Parent=gene-CCO57_RS10760;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=CCO57_RS10760;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 302905 303282 . + . ID=gene-CCO57_RS10765;Name=CCO57_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10765;old_locus_tag=CCO57_10750 NZ_NPMC01000005.1 Protein Homology CDS 302905 303282 . + 0 ID=cds-WP_000680850.1;Parent=gene-CCO57_RS10765;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=CCO57_RS10765;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 303314 303577 . - . ID=gene-CCO57_RS10770;Name=CCO57_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10770;old_locus_tag=CCO57_10755 NZ_NPMC01000005.1 Protein Homology CDS 303314 303577 . - 0 ID=cds-WP_000495513.1;Parent=gene-CCO57_RS10770;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=CCO57_RS10770;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 303747 304037 . + . ID=gene-CCO57_RS10775;Name=CCO57_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10775;old_locus_tag=CCO57_10760 NZ_NPMC01000005.1 Protein Homology CDS 303747 304037 . + 0 ID=cds-WP_001259137.1;Parent=gene-CCO57_RS10775;Dbxref=GenBank:WP_001259137.1;Name=WP_001259137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=CCO57_RS10775;product=YbjC family protein;protein_id=WP_001259137.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 304021 304743 . + . ID=gene-CCO57_RS10780;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CCO57_RS10780;old_locus_tag=CCO57_10765 NZ_NPMC01000005.1 Protein Homology CDS 304021 304743 . + 0 ID=cds-WP_001633082.1;Parent=gene-CCO57_RS10780;Dbxref=GenBank:WP_001633082.1;Name=WP_001633082.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=CCO57_RS10780;product=nitroreductase NfsA;protein_id=WP_001633082.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 304801 305703 . + . ID=gene-CCO57_RS10785;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=CCO57_RS10785;old_locus_tag=CCO57_10770 NZ_NPMC01000005.1 Protein Homology CDS 304801 305703 . + 0 ID=cds-WP_000684366.1;Parent=gene-CCO57_RS10785;Dbxref=GenBank:WP_000684366.1;Name=WP_000684366.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=CCO57_RS10785;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684366.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 305794 306270 . + . ID=gene-CCO57_RS10790;Name=CCO57_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10790;old_locus_tag=CCO57_10775 NZ_NPMC01000005.1 Protein Homology CDS 305794 306270 . + 0 ID=cds-WP_000624814.1;Parent=gene-CCO57_RS10790;Dbxref=GenBank:WP_000624814.1;Name=WP_000624814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=CCO57_RS10790;product=YbjN domain-containing protein;protein_id=WP_000624814.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 306619 307731 . + . ID=gene-CCO57_RS10795;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=CCO57_RS10795;old_locus_tag=CCO57_10780 NZ_NPMC01000005.1 Protein Homology CDS 306619 307731 . + 0 ID=cds-WP_000125769.1;Parent=gene-CCO57_RS10795;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=CCO57_RS10795;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 307819 308952 . + . ID=gene-CCO57_RS10800;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=CCO57_RS10800;old_locus_tag=CCO57_10785 NZ_NPMC01000005.1 Protein Homology CDS 307819 308952 . + 0 ID=cds-WP_001000698.1;Parent=gene-CCO57_RS10800;Dbxref=GenBank:WP_001000698.1;Name=WP_001000698.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=CCO57_RS10800;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000698.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 308962 309915 . + . ID=gene-CCO57_RS10805;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=CCO57_RS10805;old_locus_tag=CCO57_10790 NZ_NPMC01000005.1 Protein Homology CDS 308962 309915 . + 0 ID=cds-WP_000105453.1;Parent=gene-CCO57_RS10805;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=CCO57_RS10805;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 309912 310757 . + . ID=gene-CCO57_RS10810;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=CCO57_RS10810;old_locus_tag=CCO57_10795 NZ_NPMC01000005.1 Protein Homology CDS 309912 310757 . + 0 ID=cds-WP_001061629.1;Parent=gene-CCO57_RS10810;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=CCO57_RS10810;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 310831 311304 . + . ID=gene-CCO57_RS10815;Name=CCO57_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10815;old_locus_tag=CCO57_10800 NZ_NPMC01000005.1 Protein Homology CDS 310831 311304 . + 0 ID=cds-WP_000505788.1;Parent=gene-CCO57_RS10815;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=CCO57_RS10815;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 311347 312474 . + . ID=gene-CCO57_RS10820;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=CCO57_RS10820;old_locus_tag=CCO57_10805 NZ_NPMC01000005.1 Protein Homology CDS 311347 312474 . + 0 ID=cds-WP_001528785.1;Parent=gene-CCO57_RS10820;Dbxref=GenBank:WP_001528785.1;Name=WP_001528785.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=CCO57_RS10820;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001528785.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 312769 314112 . + . ID=gene-CCO57_RS10825;Name=CCO57_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10825;old_locus_tag=CCO57_10810 NZ_NPMC01000005.1 Protein Homology CDS 312769 314112 . + 0 ID=cds-WP_000399318.1;Parent=gene-CCO57_RS10825;Dbxref=GenBank:WP_000399318.1;Name=WP_000399318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=CCO57_RS10825;product=PTS sugar transporter subunit IIC;protein_id=WP_000399318.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 314142 314462 . + . ID=gene-CCO57_RS10830;Name=CCO57_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10830;old_locus_tag=CCO57_10815 NZ_NPMC01000005.1 Protein Homology CDS 314142 314462 . + 0 ID=cds-WP_000655399.1;Parent=gene-CCO57_RS10830;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=CCO57_RS10830;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 314472 315959 . + . ID=gene-CCO57_RS10835;Name=CCO57_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10835;old_locus_tag=CCO57_10820 NZ_NPMC01000005.1 Protein Homology CDS 314472 315959 . + 0 ID=cds-WP_023232938.1;Parent=gene-CCO57_RS10835;Dbxref=GenBank:WP_023232938.1;Name=WP_023232938.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=CCO57_RS10835;product=sulfatase;protein_id=WP_023232938.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 316166 316897 . - . ID=gene-CCO57_RS10845;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=CCO57_RS10845;old_locus_tag=CCO57_10830 NZ_NPMC01000005.1 Protein Homology CDS 316166 316897 . - 0 ID=cds-WP_000737537.1;Parent=gene-CCO57_RS10845;Dbxref=GenBank:WP_000737537.1;Name=WP_000737537.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=CCO57_RS10845;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737537.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 317134 317802 . - . ID=gene-CCO57_RS10850;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=CCO57_RS10850;old_locus_tag=CCO57_10835 NZ_NPMC01000005.1 Protein Homology CDS 317134 317802 . - 0 ID=cds-WP_000895393.1;Parent=gene-CCO57_RS10850;Dbxref=GenBank:WP_000895393.1;Name=WP_000895393.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=CCO57_RS10850;product=arginine ABC transporter permease ArtM;protein_id=WP_000895393.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 317802 318518 . - . ID=gene-CCO57_RS10855;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=CCO57_RS10855;old_locus_tag=CCO57_10840 NZ_NPMC01000005.1 Protein Homology CDS 317802 318518 . - 0 ID=cds-WP_001001677.1;Parent=gene-CCO57_RS10855;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=CCO57_RS10855;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 318525 319256 . - . ID=gene-CCO57_RS10860;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=CCO57_RS10860;old_locus_tag=CCO57_10845 NZ_NPMC01000005.1 Protein Homology CDS 318525 319256 . - 0 ID=cds-WP_000756586.1;Parent=gene-CCO57_RS10860;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=CCO57_RS10860;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 319274 320002 . - . ID=gene-CCO57_RS10865;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=CCO57_RS10865;old_locus_tag=CCO57_10850 NZ_NPMC01000005.1 Protein Homology CDS 319274 320002 . - 0 ID=cds-WP_000027186.1;Parent=gene-CCO57_RS10865;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=CCO57_RS10865;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 320231 320746 . - . ID=gene-CCO57_RS10870;Name=CCO57_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10870;old_locus_tag=CCO57_10855 NZ_NPMC01000005.1 Protein Homology CDS 320231 320746 . - 0 ID=cds-WP_001270724.1;Parent=gene-CCO57_RS10870;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=CCO57_RS10870;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 320874 321197 . + . ID=gene-CCO57_RS10875;Name=CCO57_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10875;old_locus_tag=CCO57_10860 NZ_NPMC01000005.1 Protein Homology CDS 320874 321197 . + 0 ID=cds-WP_001160725.1;Parent=gene-CCO57_RS10875;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO57_RS10875;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 321194 322024 . + . ID=gene-CCO57_RS10880;Name=CCO57_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10880;old_locus_tag=CCO57_10865 NZ_NPMC01000005.1 Protein Homology CDS 321194 322024 . + 0 ID=cds-WP_058111904.1;Parent=gene-CCO57_RS10880;Dbxref=GenBank:WP_058111904.1;Name=WP_058111904.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=CCO57_RS10880;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_058111904.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 322021 323034 . - . ID=gene-CCO57_RS10885;Name=CCO57_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10885;old_locus_tag=CCO57_10870 NZ_NPMC01000005.1 Protein Homology CDS 322021 323034 . - 0 ID=cds-WP_000866902.1;Parent=gene-CCO57_RS10885;Dbxref=GenBank:WP_000866902.1;Name=WP_000866902.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=CCO57_RS10885;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_000866902.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 323130 324563 . - . ID=gene-CCO57_RS10890;Name=CCO57_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10890;old_locus_tag=CCO57_10875 NZ_NPMC01000005.1 Protein Homology CDS 323130 324563 . - 0 ID=cds-WP_094914929.1;Parent=gene-CCO57_RS10890;Dbxref=GenBank:WP_094914929.1;Name=WP_094914929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=CCO57_RS10890;product=SDR family oxidoreductase;protein_id=WP_094914929.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 324574 325575 . - . ID=gene-CCO57_RS10895;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=CCO57_RS10895;old_locus_tag=CCO57_10880 NZ_NPMC01000005.1 Protein Homology CDS 324574 325575 . - 0 ID=cds-WP_000566346.1;Parent=gene-CCO57_RS10895;Dbxref=GenBank:WP_000566346.1;Name=WP_000566346.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=CCO57_RS10895;product=low-specificity L-threonine aldolase;protein_id=WP_000566346.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 325614 327332 . - . ID=gene-CCO57_RS10900;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=CCO57_RS10900;old_locus_tag=CCO57_10885 NZ_NPMC01000005.1 Protein Homology CDS 325614 327332 . - 0 ID=cds-WP_023215071.1;Parent=gene-CCO57_RS10900;Dbxref=GenBank:WP_023215071.1;Name=WP_023215071.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=CCO57_RS10900;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_023215071.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 327490 328458 . - . ID=gene-CCO57_RS10905;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=CCO57_RS10905;old_locus_tag=CCO57_10890 NZ_NPMC01000005.1 Protein Homology CDS 327490 328458 . - 0 ID=cds-WP_001538209.1;Parent=gene-CCO57_RS10905;Dbxref=GenBank:WP_001538209.1;Name=WP_001538209.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=CCO57_RS10905;product=NADH oxidoreductase;protein_id=WP_001538209.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 328470 330122 . - . ID=gene-CCO57_RS10910;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=CCO57_RS10910;old_locus_tag=CCO57_10895 NZ_NPMC01000005.1 Protein Homology CDS 328470 330122 . - 0 ID=cds-WP_000458785.1;Parent=gene-CCO57_RS10910;Dbxref=GenBank:WP_000458785.1;Name=WP_000458785.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=CCO57_RS10910;product=hydroxylamine reductase;protein_id=WP_000458785.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 330266 331165 . - . ID=gene-CCO57_RS10915;Name=CCO57_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10915;old_locus_tag=CCO57_10900 NZ_NPMC01000005.1 Protein Homology CDS 330266 331165 . - 0 ID=cds-WP_001648559.1;Parent=gene-CCO57_RS10915;Dbxref=GenBank:WP_001648559.1;Name=WP_001648559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=CCO57_RS10915;product=lysine exporter LysO family protein;protein_id=WP_001648559.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 331366 333024 . + . ID=gene-CCO57_RS10925;Name=CCO57_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10925;old_locus_tag=CCO57_10910 NZ_NPMC01000005.1 Protein Homology CDS 331366 333024 . + 0 ID=cds-WP_000599770.1;Parent=gene-CCO57_RS10925;Dbxref=GenBank:WP_000599770.1;Name=WP_000599770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=CCO57_RS10925;product=ATP-dependent endonuclease;protein_id=WP_000599770.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 333021 333971 . - . ID=gene-CCO57_RS10930;Name=CCO57_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10930;old_locus_tag=CCO57_10915 NZ_NPMC01000005.1 Protein Homology CDS 333021 333971 . - 0 ID=cds-WP_001528818.1;Parent=gene-CCO57_RS10930;Dbxref=GenBank:WP_001528818.1;Name=WP_001528818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=CCO57_RS10930;product=VirK/YbjX family protein;protein_id=WP_001528818.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 334117 335235 . + . ID=gene-CCO57_RS10935;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=CCO57_RS10935;old_locus_tag=CCO57_10920 NZ_NPMC01000005.1 Protein Homology CDS 334117 335235 . + 0 ID=cds-WP_088523871.1;Parent=gene-CCO57_RS10935;Dbxref=GenBank:WP_088523871.1;Name=WP_088523871.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=CCO57_RS10935;product=macrolide transporter subunit MacA;protein_id=WP_088523871.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 335232 337178 . + . ID=gene-CCO57_RS10940;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=CCO57_RS10940;old_locus_tag=CCO57_10925 NZ_NPMC01000005.1 Protein Homology CDS 335232 337178 . + 0 ID=cds-WP_023232933.1;Parent=gene-CCO57_RS10940;Dbxref=GenBank:WP_023232933.1;Name=WP_023232933.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=CCO57_RS10940;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_023232933.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 337308 337529 . - . ID=gene-CCO57_RS10950;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=CCO57_RS10950;old_locus_tag=CCO57_10935 NZ_NPMC01000005.1 Protein Homology CDS 337308 337529 . - 0 ID=cds-WP_000447499.1;Parent=gene-CCO57_RS10950;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=CCO57_RS10950;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 337680 337757 . + . ID=gene-CCO57_RS24590;Name=CCO57_RS24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24590 NZ_NPMC01000005.1 Protein Homology CDS 337680 337757 . + 0 ID=cds-WP_212742690.1;Parent=gene-CCO57_RS24590;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=CCO57_RS24590;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 337853 338173 . + . ID=gene-CCO57_RS10955;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=CCO57_RS10955;old_locus_tag=CCO57_10940 NZ_NPMC01000005.1 Protein Homology CDS 337853 338173 . + 0 ID=cds-WP_000520789.1;Parent=gene-CCO57_RS10955;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=CCO57_RS10955;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 338204 340480 . + . ID=gene-CCO57_RS10960;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=CCO57_RS10960;old_locus_tag=CCO57_10945 NZ_NPMC01000005.1 Protein Homology CDS 338204 340480 . + 0 ID=cds-WP_000934064.1;Parent=gene-CCO57_RS10960;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=CCO57_RS10960;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11 NZ_NPMC01000005.1 RefSeq gene 340670 340803 . - . ID=gene-CCO57_RS10965;Name=CCO57_RS10965;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO57_RS10965;old_locus_tag=CCO57_10950 NZ_NPMC01000005.1 cmsearch ncRNA 340670 340803 . - . ID=rna-CCO57_RS10965;Parent=gene-CCO57_RS10965;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS10965;product=RtT sRNA NZ_NPMC01000005.1 cmsearch exon 340670 340803 . - . ID=exon-CCO57_RS10965-1;Parent=rna-CCO57_RS10965;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS10965;product=RtT sRNA ##sequence-region NZ_NPMC01000006.1 1 308091 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000006.1 RefSeq region 1 308091 . + . ID=NZ_NPMC01000006.1:1..308091;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000006.1 RefSeq gene 191 3715 . - . ID=gene-CCO57_RS10975;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=CCO57_RS10975;old_locus_tag=CCO57_10960 NZ_NPMC01000006.1 Protein Homology CDS 191 3715 . - 0 ID=cds-WP_094914932.1;Parent=gene-CCO57_RS10975;Dbxref=GenBank:WP_094914932.1;Name=WP_094914932.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=CCO57_RS10975;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_094914932.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 3776 4087 . - . ID=gene-CCO57_RS10980;Name=CCO57_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10980;old_locus_tag=CCO57_10965 NZ_NPMC01000006.1 Protein Homology CDS 3776 4087 . - 0 ID=cds-WP_088524256.1;Parent=gene-CCO57_RS10980;Dbxref=GenBank:WP_088524256.1;Name=WP_088524256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=CCO57_RS10980;product=reverse transcriptase;protein_id=WP_088524256.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 3991 4257 . + . ID=gene-CCO57_RS10985;Name=CCO57_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS10985;old_locus_tag=CCO57_10970 NZ_NPMC01000006.1 Protein Homology CDS 3991 4257 . + 0 ID=cds-WP_001200680.1;Parent=gene-CCO57_RS10985;Dbxref=GenBank:WP_001200680.1;Name=WP_001200680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=CCO57_RS10985;product=putative hemolysin;protein_id=WP_001200680.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 4301 4711 . - . ID=gene-CCO57_RS10990;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=CCO57_RS10990;old_locus_tag=CCO57_10975 NZ_NPMC01000006.1 Protein Homology CDS 4301 4711 . - 0 ID=cds-WP_000725242.1;Parent=gene-CCO57_RS10990;Dbxref=GenBank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=CCO57_RS10990;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 4822 5811 . - . ID=gene-CCO57_RS10995;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=CCO57_RS10995;old_locus_tag=CCO57_10980 NZ_NPMC01000006.1 Protein Homology CDS 4822 5811 . - 0 ID=cds-WP_000762206.1;Parent=gene-CCO57_RS10995;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=CCO57_RS10995;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 6078 8714 . + . ID=gene-CCO57_RS11000;Name=CCO57_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11000;old_locus_tag=CCO57_10985 NZ_NPMC01000006.1 Protein Homology CDS 6078 8714 . + 0 ID=cds-WP_000677022.1;Parent=gene-CCO57_RS11000;Dbxref=GenBank:WP_000677022.1;Name=WP_000677022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=CCO57_RS11000;product=YdbH family protein;protein_id=WP_000677022.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 8714 8905 . + . ID=gene-CCO57_RS11005;Name=CCO57_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11005;old_locus_tag=CCO57_10990 NZ_NPMC01000006.1 Protein Homology CDS 8714 8905 . + 0 ID=cds-WP_000784063.1;Parent=gene-CCO57_RS11005;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=CCO57_RS11005;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 8913 9236 . + . ID=gene-CCO57_RS11010;Name=CCO57_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11010;old_locus_tag=CCO57_10995 NZ_NPMC01000006.1 Protein Homology CDS 8913 9236 . + 0 ID=cds-WP_000760414.1;Parent=gene-CCO57_RS11010;Dbxref=GenBank:WP_000760414.1;Name=WP_000760414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=CCO57_RS11010;product=YdbL family protein;protein_id=WP_000760414.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 9380 9829 . + . ID=gene-CCO57_RS11015;Name=CCO57_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11015;old_locus_tag=CCO57_11000 NZ_NPMC01000006.1 Protein Homology CDS 9380 9829 . + 0 ID=cds-WP_001518898.1;Parent=gene-CCO57_RS11015;Dbxref=GenBank:WP_001518898.1;Name=WP_001518898.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=CCO57_RS11015;product=GFA family protein;protein_id=WP_001518898.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 9826 10431 . - . ID=gene-CCO57_RS11020;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=CCO57_RS11020;old_locus_tag=CCO57_11005 NZ_NPMC01000006.1 Protein Homology CDS 9826 10431 . - 0 ID=cds-WP_000048931.1;Parent=gene-CCO57_RS11020;Dbxref=GenBank:WP_000048931.1;Name=WP_000048931.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=CCO57_RS11020;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048931.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 10632 14534 . + . ID=gene-CCO57_RS11025;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=CCO57_RS11025;old_locus_tag=CCO57_11010 NZ_NPMC01000006.1 Protein Homology CDS 10632 14534 . + 0 ID=cds-WP_094914965.1;Parent=gene-CCO57_RS11025;Dbxref=GenBank:WP_094914965.1;Name=WP_094914965.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=CCO57_RS11025;product=ATP-dependent RNA helicase HrpA;protein_id=WP_094914965.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 14598 15398 . + . ID=gene-CCO57_RS11030;Name=CCO57_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11030;old_locus_tag=CCO57_11015 NZ_NPMC01000006.1 Protein Homology CDS 14598 15398 . + 0 ID=cds-WP_094914933.1;Parent=gene-CCO57_RS11030;Dbxref=GenBank:WP_094914933.1;Name=WP_094914933.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=CCO57_RS11030;product=YdcF family protein;protein_id=WP_094914933.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 15515 16045 . + . ID=gene-CCO57_RS11035;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=CCO57_RS11035;old_locus_tag=CCO57_11020 NZ_NPMC01000006.1 Protein Homology CDS 15515 16045 . + 0 ID=cds-WP_094914934.1;Parent=gene-CCO57_RS11035;Dbxref=GenBank:WP_094914934.1;Name=WP_094914934.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=CCO57_RS11035;product=cytochrome b561;protein_id=WP_094914934.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 16316 16978 . - . ID=gene-CCO57_RS11040;Name=CCO57_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11040;old_locus_tag=CCO57_11025 NZ_NPMC01000006.1 Protein Homology CDS 16316 16978 . - 0 ID=cds-WP_001527769.1;Parent=gene-CCO57_RS11040;Dbxref=GenBank:WP_001527769.1;Name=WP_001527769.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=CCO57_RS11040;product=class I SAM-dependent methyltransferase;protein_id=WP_001527769.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 17442 18992 . - . ID=gene-CCO57_RS11045;Name=CCO57_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11045;old_locus_tag=CCO57_11030 NZ_NPMC01000006.1 Protein Homology CDS 17442 18992 . - 0 ID=cds-WP_088546243.1;Parent=gene-CCO57_RS11045;Dbxref=GenBank:WP_088546243.1;Name=WP_088546243.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=CCO57_RS11045;product=glycosyltransferase family 39 protein;protein_id=WP_088546243.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 19129 19809 . - . ID=gene-CCO57_RS11050;Name=CCO57_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11050;old_locus_tag=CCO57_11035 NZ_NPMC01000006.1 Protein Homology CDS 19129 19809 . - 0 ID=cds-WP_000560165.1;Parent=gene-CCO57_RS11050;Dbxref=GenBank:WP_000560165.1;Name=WP_000560165.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=CCO57_RS11050;product=amino acid ABC transporter permease;protein_id=WP_000560165.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 19806 20537 . - . ID=gene-CCO57_RS11055;Name=CCO57_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11055;old_locus_tag=CCO57_11040 NZ_NPMC01000006.1 Protein Homology CDS 19806 20537 . - 0 ID=cds-WP_001527803.1;Parent=gene-CCO57_RS11055;Dbxref=GenBank:WP_001527803.1;Name=WP_001527803.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=CCO57_RS11055;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001527803.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 20562 21209 . - . ID=gene-CCO57_RS11060;Name=CCO57_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11060;old_locus_tag=CCO57_11045 NZ_NPMC01000006.1 Protein Homology CDS 20562 21209 . - 0 ID=cds-WP_079822118.1;Parent=gene-CCO57_RS11060;Dbxref=GenBank:WP_079822118.1;Name=WP_079822118.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=CCO57_RS11060;product=amino acid ABC transporter permease;protein_id=WP_079822118.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 21216 21977 . - . ID=gene-CCO57_RS11065;Name=CCO57_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11065;old_locus_tag=CCO57_11050 NZ_NPMC01000006.1 Protein Homology CDS 21216 21977 . - 0 ID=cds-WP_000949373.1;Parent=gene-CCO57_RS11065;Dbxref=GenBank:WP_000949373.1;Name=WP_000949373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=CCO57_RS11065;product=transporter substrate-binding domain-containing protein;protein_id=WP_000949373.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 22886 23230 . + . ID=gene-CCO57_RS11070;Name=CCO57_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11070;old_locus_tag=CCO57_11055 NZ_NPMC01000006.1 Protein Homology CDS 22886 23230 . + 0 ID=cds-WP_000281190.1;Parent=gene-CCO57_RS11070;Dbxref=GenBank:WP_000281190.1;Name=WP_000281190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=CCO57_RS11070;product=DUF1294 domain-containing protein;protein_id=WP_000281190.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 23351 24577 . - . ID=gene-CCO57_RS11075;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=CCO57_RS11075;old_locus_tag=CCO57_11060 NZ_NPMC01000006.1 Protein Homology CDS 23351 24577 . - 0 ID=cds-WP_001131418.1;Parent=gene-CCO57_RS11075;Dbxref=GenBank:WP_001131418.1;Name=WP_001131418.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=CCO57_RS11075;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_001131418.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 25003 25719 . + . ID=gene-CCO57_RS11080;Name=CCO57_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11080;old_locus_tag=CCO57_11065 NZ_NPMC01000006.1 Protein Homology CDS 25003 25719 . + 0 ID=cds-WP_001527697.1;Parent=gene-CCO57_RS11080;Dbxref=GenBank:WP_001527697.1;Name=WP_001527697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=CCO57_RS11080;product=hypothetical protein;protein_id=WP_001527697.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 25848 26249 . - . ID=gene-CCO57_RS11085;Name=CCO57_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11085;old_locus_tag=CCO57_11070 NZ_NPMC01000006.1 Protein Homology CDS 25848 26249 . - 0 ID=cds-WP_077909911.1;Parent=gene-CCO57_RS11085;Dbxref=GenBank:WP_077909911.1;Name=WP_077909911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=CCO57_RS11085;product=effector protein;protein_id=WP_077909911.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 26772 27047 . + . ID=gene-CCO57_RS11090;Name=CCO57_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11090;old_locus_tag=CCO57_11075 NZ_NPMC01000006.1 Protein Homology CDS 26772 27047 . + 0 ID=cds-WP_001120770.1;Parent=gene-CCO57_RS11090;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=CCO57_RS11090;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 27079 28197 . + . ID=gene-CCO57_RS11095;Name=CCO57_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11095;old_locus_tag=CCO57_11080 NZ_NPMC01000006.1 Protein Homology CDS 27079 28197 . + 0 ID=cds-WP_000842138.1;Parent=gene-CCO57_RS11095;Dbxref=GenBank:WP_000842138.1;Name=WP_000842138.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=CCO57_RS11095;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842138.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 28367 29992 . + . ID=gene-CCO57_RS11105;Name=CCO57_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11105;old_locus_tag=CCO57_11090 NZ_NPMC01000006.1 Protein Homology CDS 28367 29992 . + 0 ID=cds-WP_094888554.1;Parent=gene-CCO57_RS11105;Dbxref=GenBank:WP_094888554.1;Name=WP_094888554.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=CCO57_RS11105;product=methyl-accepting chemotaxis protein;protein_id=WP_094888554.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 30053 30976 . - . ID=gene-CCO57_RS11110;Name=CCO57_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11110;old_locus_tag=CCO57_11095 NZ_NPMC01000006.1 Protein Homology CDS 30053 30976 . - 0 ID=cds-WP_000414259.1;Parent=gene-CCO57_RS11110;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=CCO57_RS11110;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 31269 32612 . + . ID=gene-CCO57_RS11115;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=CCO57_RS11115;old_locus_tag=CCO57_11100 NZ_NPMC01000006.1 Protein Homology CDS 31269 32612 . + 0 ID=cds-WP_000024089.1;Parent=gene-CCO57_RS11115;Dbxref=GenBank:WP_000024089.1;Name=WP_000024089.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=CCO57_RS11115;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000024089.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 32661 34169 . + . ID=gene-CCO57_RS11120;Name=CCO57_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11120;old_locus_tag=CCO57_11105 NZ_NPMC01000006.1 Protein Homology CDS 32661 34169 . + 0 ID=cds-WP_094914935.1;Parent=gene-CCO57_RS11120;Dbxref=GenBank:WP_094914935.1;Name=WP_094914935.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=CCO57_RS11120;product=carboxylesterase/lipase family protein;protein_id=WP_094914935.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 34389 36044 . + . ID=gene-CCO57_RS11125;Name=CCO57_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11125;old_locus_tag=CCO57_11110 NZ_NPMC01000006.1 Protein Homology CDS 34389 36044 . + 0 ID=cds-WP_001081954.1;Parent=gene-CCO57_RS11125;Dbxref=GenBank:WP_001081954.1;Name=WP_001081954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=CCO57_RS11125;product=glucan biosynthesis protein D;protein_id=WP_001081954.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 36240 36815 . + . ID=gene-CCO57_RS11130;Name=CCO57_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11130;old_locus_tag=CCO57_11115 NZ_NPMC01000006.1 Protein Homology CDS 36240 36815 . + 0 ID=cds-WP_001024319.1;Parent=gene-CCO57_RS11130;Dbxref=GenBank:WP_001024319.1;Name=WP_001024319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=CCO57_RS11130;product=YceI family protein;protein_id=WP_001024319.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 36827 38026 . + . ID=gene-CCO57_RS11135;Name=CCO57_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11135;old_locus_tag=CCO57_11120 NZ_NPMC01000006.1 Protein Homology CDS 36827 38026 . + 0 ID=cds-WP_094914936.1;Parent=gene-CCO57_RS11135;Dbxref=GenBank:WP_094914936.1;Name=WP_094914936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527757.1;locus_tag=CCO57_RS11135;product=lactate oxidase;protein_id=WP_094914936.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 38076 38513 . - . ID=gene-CCO57_RS11140;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=CCO57_RS11140;old_locus_tag=CCO57_11125 NZ_NPMC01000006.1 Protein Homology CDS 38076 38513 . - 0 ID=cds-WP_001527671.1;Parent=gene-CCO57_RS11140;Dbxref=GenBank:WP_001527671.1;Name=WP_001527671.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=CCO57_RS11140;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_001527671.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 38513 39304 . - . ID=gene-CCO57_RS11145;Name=CCO57_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11145;old_locus_tag=CCO57_11130 NZ_NPMC01000006.1 Protein Homology CDS 38513 39304 . - 0 ID=cds-WP_015405939.1;Parent=gene-CCO57_RS11145;Dbxref=GenBank:WP_015405939.1;Name=WP_015405939.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=CCO57_RS11145;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_015405939.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 39320 39952 . - . ID=gene-CCO57_RS11150;Name=CCO57_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11150;old_locus_tag=CCO57_11135 NZ_NPMC01000006.1 Protein Homology CDS 39320 39952 . - 0 ID=cds-WP_000600602.1;Parent=gene-CCO57_RS11150;Dbxref=GenBank:WP_000600602.1;Name=WP_000600602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=CCO57_RS11150;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600602.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 39964 40401 . - . ID=gene-CCO57_RS11155;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=CCO57_RS11155;old_locus_tag=CCO57_11140 NZ_NPMC01000006.1 Protein Homology CDS 39964 40401 . - 0 ID=cds-WP_000606454.1;Parent=gene-CCO57_RS11155;Dbxref=GenBank:WP_000606454.1;Name=WP_000606454.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=CCO57_RS11155;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606454.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 40533 41339 . - . ID=gene-CCO57_RS11160;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=CCO57_RS11160;old_locus_tag=CCO57_11145 NZ_NPMC01000006.1 Protein Homology CDS 40533 41339 . - 0 ID=cds-WP_000118619.1;Parent=gene-CCO57_RS11160;Dbxref=GenBank:WP_000118619.1;Name=WP_000118619.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=CCO57_RS11160;product=BtpA family protein SgcQ;protein_id=WP_000118619.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 41353 42666 . - . ID=gene-CCO57_RS11165;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=CCO57_RS11165;old_locus_tag=CCO57_11150 NZ_NPMC01000006.1 Protein Homology CDS 41353 42666 . - 0 ID=cds-WP_000460835.1;Parent=gene-CCO57_RS11165;Dbxref=GenBank:WP_000460835.1;Name=WP_000460835.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=CCO57_RS11165;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_000460835.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 42677 42958 . - . ID=gene-CCO57_RS11170;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=CCO57_RS11170;old_locus_tag=CCO57_11155 NZ_NPMC01000006.1 Protein Homology CDS 42677 42958 . - 0 ID=cds-WP_000976132.1;Parent=gene-CCO57_RS11170;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=CCO57_RS11170;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 42955 44073 . - . ID=gene-CCO57_RS11175;Name=CCO57_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11175;old_locus_tag=CCO57_11160 NZ_NPMC01000006.1 Protein Homology CDS 42955 44073 . - 0 ID=cds-WP_000144623.1;Parent=gene-CCO57_RS11175;Dbxref=GenBank:WP_000144623.1;Name=WP_000144623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=CCO57_RS11175;product=M42 family metallopeptidase;protein_id=WP_000144623.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 44290 44829 . + . ID=gene-CCO57_RS11180;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=CCO57_RS11180;old_locus_tag=CCO57_11165 NZ_NPMC01000006.1 Protein Homology CDS 44290 44829 . + 0 ID=cds-WP_000229299.1;Parent=gene-CCO57_RS11180;Dbxref=GenBank:WP_000229299.1;Name=WP_000229299.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=CCO57_RS11180;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229299.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 44826 45806 . - . ID=gene-CCO57_RS11185;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=CCO57_RS11185;old_locus_tag=CCO57_11170 NZ_NPMC01000006.1 Protein Homology CDS 44826 45806 . - 0 ID=cds-WP_023229127.1;Parent=gene-CCO57_RS11185;Dbxref=GenBank:WP_023229127.1;Name=WP_023229127.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=CCO57_RS11185;product=YdcK family protein;protein_id=WP_023229127.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 45913 46926 . + . ID=gene-CCO57_RS11190;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=CCO57_RS11190;old_locus_tag=CCO57_11175 NZ_NPMC01000006.1 Protein Homology CDS 45913 46926 . + 0 ID=cds-WP_001243996.1;Parent=gene-CCO57_RS11190;Dbxref=GenBank:WP_001243996.1;Name=WP_001243996.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=CCO57_RS11190;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001243996.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 46913 47509 . + . ID=gene-CCO57_RS11195;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=CCO57_RS11195;old_locus_tag=CCO57_11180 NZ_NPMC01000006.1 Protein Homology CDS 46913 47509 . + 0 ID=cds-WP_000218278.1;Parent=gene-CCO57_RS11195;Dbxref=GenBank:WP_000218278.1;Name=WP_000218278.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=CCO57_RS11195;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218278.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 47665 48333 . + . ID=gene-CCO57_RS11200;Name=CCO57_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11200;old_locus_tag=CCO57_11185 NZ_NPMC01000006.1 Protein Homology CDS 47665 48333 . + 0 ID=cds-WP_001259021.1;Parent=gene-CCO57_RS11200;Dbxref=GenBank:WP_001259021.1;Name=WP_001259021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=CCO57_RS11200;product=DUF3313 domain-containing protein;protein_id=WP_001259021.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 48387 49565 . - . ID=gene-CCO57_RS11205;Name=CCO57_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11205;old_locus_tag=CCO57_11190 NZ_NPMC01000006.1 Protein Homology CDS 48387 49565 . - 0 ID=cds-WP_001238500.1;Parent=gene-CCO57_RS11205;Dbxref=GenBank:WP_001238500.1;Name=WP_001238500.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=CCO57_RS11205;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_001238500.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 49657 50193 . + . ID=gene-CCO57_RS11210;Name=CCO57_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11210;old_locus_tag=CCO57_11195 NZ_NPMC01000006.1 Protein Homology CDS 49657 50193 . + 0 ID=cds-WP_094914937.1;Parent=gene-CCO57_RS11210;Dbxref=GenBank:WP_094914937.1;Name=WP_094914937.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=CCO57_RS11210;product=helix-turn-helix domain-containing protein;protein_id=WP_094914937.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 50272 52236 . + . ID=gene-CCO57_RS11215;Name=CCO57_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11215;old_locus_tag=CCO57_11200 NZ_NPMC01000006.1 Protein Homology CDS 50272 52236 . + 0 ID=cds-WP_001249761.1;Parent=gene-CCO57_RS11215;Dbxref=GenBank:WP_001249761.1;Name=WP_001249761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=CCO57_RS11215;product=peptidase U32 family protein;protein_id=WP_001249761.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 52237 52467 . - . ID=gene-CCO57_RS11220;Name=CCO57_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11220;old_locus_tag=CCO57_11205 NZ_NPMC01000006.1 Protein Homology CDS 52237 52467 . - 0 ID=cds-WP_000956438.1;Parent=gene-CCO57_RS11220;Dbxref=GenBank:WP_000956438.1;Name=WP_000956438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=CCO57_RS11220;product=DUF2554 family protein;protein_id=WP_000956438.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 52740 53690 . - . ID=gene-CCO57_RS11225;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=CCO57_RS11225;old_locus_tag=CCO57_11210 NZ_NPMC01000006.1 Protein Homology CDS 52740 53690 . - 0 ID=cds-WP_001122937.1;Parent=gene-CCO57_RS11225;Dbxref=GenBank:WP_001122937.1;Name=WP_001122937.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001122935.1;locus_tag=CCO57_RS11225;product=SPI-2 type III secretion system effector SifB;protein_id=WP_001122937.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 54206 54604 . + . ID=gene-CCO57_RS11230;Name=CCO57_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11230;old_locus_tag=CCO57_11215 NZ_NPMC01000006.1 Protein Homology CDS 54206 54604 . + 0 ID=cds-WP_000747901.1;Parent=gene-CCO57_RS11230;Dbxref=GenBank:WP_000747901.1;Name=WP_000747901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=CCO57_RS11230;product=hypothetical protein;protein_id=WP_000747901.1;transl_table=11 NZ_NPMC01000006.1 RefSeq pseudogene 54637 54868 . + . ID=gene-CCO57_RS11235;Name=CCO57_RS11235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS11235;old_locus_tag=CCO57_11220;pseudo=true NZ_NPMC01000006.1 Protein Homology CDS 54637 54868 . + 0 ID=cds-CCO57_RS11235;Parent=gene-CCO57_RS11235;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=CCO57_RS11235;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 55129 55899 . + . ID=gene-CCO57_RS11240;Name=CCO57_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11240;old_locus_tag=CCO57_11225 NZ_NPMC01000006.1 Protein Homology CDS 55129 55899 . + 0 ID=cds-WP_001527723.1;Parent=gene-CCO57_RS11240;Dbxref=GenBank:WP_001527723.1;Name=WP_001527723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=CCO57_RS11240;product=M15 family metallopeptidase;protein_id=WP_001527723.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 56035 57459 . + . ID=gene-CCO57_RS11245;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=CCO57_RS11245;old_locus_tag=CCO57_11230 NZ_NPMC01000006.1 Protein Homology CDS 56035 57459 . + 0 ID=cds-WP_000760688.1;Parent=gene-CCO57_RS11245;Dbxref=GenBank:WP_000760688.1;Name=WP_000760688.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=CCO57_RS11245;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760688.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 57574 59019 . + . ID=gene-CCO57_RS11250;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=CCO57_RS11250;old_locus_tag=CCO57_11235 NZ_NPMC01000006.1 Protein Homology CDS 57574 59019 . + 0 ID=cds-WP_094914938.1;Parent=gene-CCO57_RS11250;Dbxref=GenBank:WP_094914938.1;Name=WP_094914938.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=CCO57_RS11250;product=aminobutyraldehyde dehydrogenase;protein_id=WP_094914938.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 59124 59219 . - . ID=gene-CCO57_RS11255;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=CCO57_RS11255;old_locus_tag=CCO57_11240 NZ_NPMC01000006.1 Protein Homology CDS 59124 59219 . - 0 ID=cds-WP_001103198.1;Parent=gene-CCO57_RS11255;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=CCO57_RS11255;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 59418 59591 . + . ID=gene-CCO57_RS11260;Name=CCO57_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11260;old_locus_tag=CCO57_11245 NZ_NPMC01000006.1 Protein Homology CDS 59418 59591 . + 0 ID=cds-WP_000171943.1;Parent=gene-CCO57_RS11260;Dbxref=GenBank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=CCO57_RS11260;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 59636 61780 . - . ID=gene-CCO57_RS11265;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=CCO57_RS11265;old_locus_tag=CCO57_11250 NZ_NPMC01000006.1 Protein Homology CDS 59636 61780 . - 0 ID=cds-WP_001527891.1;Parent=gene-CCO57_RS11265;Dbxref=GenBank:WP_001527891.1;Name=WP_001527891.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=CCO57_RS11265;product=virulence-associated effector SrfC;protein_id=WP_001527891.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 61777 64758 . - . ID=gene-CCO57_RS11270;Name=CCO57_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11270;old_locus_tag=CCO57_11255 NZ_NPMC01000006.1 Protein Homology CDS 61777 64758 . - 0 ID=cds-WP_000960830.1;Parent=gene-CCO57_RS11270;Dbxref=GenBank:WP_000960830.1;Name=WP_000960830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=CCO57_RS11270;product=virulence factor SrfB;protein_id=WP_000960830.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 64763 66088 . - . ID=gene-CCO57_RS11275;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=CCO57_RS11275;old_locus_tag=CCO57_11260 NZ_NPMC01000006.1 Protein Homology CDS 64763 66088 . - 0 ID=cds-WP_001129947.1;Parent=gene-CCO57_RS11275;Dbxref=GenBank:WP_001129947.1;Name=WP_001129947.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=CCO57_RS11275;product=virulence-associated effector SrfA;protein_id=WP_001129947.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 66312 66545 . + . ID=gene-CCO57_RS11280;Name=CCO57_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11280;old_locus_tag=CCO57_11265 NZ_NPMC01000006.1 Protein Homology CDS 66312 66545 . + 0 ID=cds-WP_000018720.1;Parent=gene-CCO57_RS11280;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=CCO57_RS11280;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 66550 66999 . - . ID=gene-CCO57_RS11285;Name=CCO57_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11285;old_locus_tag=CCO57_11270 NZ_NPMC01000006.1 Protein Homology CDS 66550 66999 . - 0 ID=cds-WP_001076565.1;Parent=gene-CCO57_RS11285;Dbxref=GenBank:WP_001076565.1;Name=WP_001076565.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=CCO57_RS11285;product=DMT family transporter;protein_id=WP_001076565.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 66999 67514 . - . ID=gene-CCO57_RS11290;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=CCO57_RS11290;old_locus_tag=CCO57_11275 NZ_NPMC01000006.1 Protein Homology CDS 66999 67514 . - 0 ID=cds-WP_000155373.1;Parent=gene-CCO57_RS11290;Dbxref=GenBank:WP_000155373.1;Name=WP_000155373.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=CCO57_RS11290;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155373.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 67725 68762 . + . ID=gene-CCO57_RS11295;Name=CCO57_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11295;old_locus_tag=CCO57_11280 NZ_NPMC01000006.1 Protein Homology CDS 67725 68762 . + 0 ID=cds-WP_094914939.1;Parent=gene-CCO57_RS11295;Dbxref=GenBank:WP_094914939.1;Name=WP_094914939.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=CCO57_RS11295;product=NADP-dependent oxidoreductase;protein_id=WP_094914939.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 69096 69761 . + . ID=gene-CCO57_RS11300;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=CCO57_RS11300;old_locus_tag=CCO57_11285 NZ_NPMC01000006.1 Protein Homology CDS 69096 69761 . + 0 ID=cds-WP_001119592.1;Parent=gene-CCO57_RS11300;Dbxref=GenBank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=CCO57_RS11300;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119592.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 69828 71948 . - . ID=gene-CCO57_RS11305;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=CCO57_RS11305;old_locus_tag=CCO57_11290 NZ_NPMC01000006.1 Protein Homology CDS 69828 71948 . - 0 ID=cds-WP_000692034.1;Parent=gene-CCO57_RS11305;Dbxref=GenBank:WP_000692034.1;Name=WP_000692034.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=CCO57_RS11305;product=TonB-dependent receptor PqqU;protein_id=WP_000692034.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 72212 73273 . + . ID=gene-CCO57_RS11310;Name=CCO57_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11310;old_locus_tag=CCO57_11295 NZ_NPMC01000006.1 Protein Homology CDS 72212 73273 . + 0 ID=cds-WP_094914940.1;Parent=gene-CCO57_RS11310;Dbxref=GenBank:WP_094914940.1;Name=WP_094914940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=CCO57_RS11310;product=YncE family protein;protein_id=WP_094914940.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 73418 73639 . + . ID=gene-CCO57_RS11315;Name=CCO57_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11315;old_locus_tag=CCO57_11300 NZ_NPMC01000006.1 Protein Homology CDS 73418 73639 . + 0 ID=cds-WP_000732362.1;Parent=gene-CCO57_RS11315;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=CCO57_RS11315;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 73716 75209 . - . ID=gene-CCO57_RS11320;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=CCO57_RS11320;old_locus_tag=CCO57_11305 NZ_NPMC01000006.1 Protein Homology CDS 73716 75209 . - 0 ID=cds-WP_000857112.1;Parent=gene-CCO57_RS11320;Dbxref=GenBank:WP_000857112.1;Name=WP_000857112.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=CCO57_RS11320;product=L-asparagine permease;protein_id=WP_000857112.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 75722 76354 . + . ID=gene-CCO57_RS11325;Name=CCO57_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11325;old_locus_tag=CCO57_11310 NZ_NPMC01000006.1 Protein Homology CDS 75722 76354 . + 0 ID=cds-WP_001120856.1;Parent=gene-CCO57_RS11325;Dbxref=GenBank:WP_001120856.1;Name=WP_001120856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=CCO57_RS11325;product=hypothetical protein;protein_id=WP_001120856.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 76638 77483 . + . ID=gene-CCO57_RS11330;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=CCO57_RS11330;old_locus_tag=CCO57_11315 NZ_NPMC01000006.1 Protein Homology CDS 76638 77483 . + 0 ID=cds-WP_000200323.1;Parent=gene-CCO57_RS11330;Dbxref=GenBank:WP_000200323.1;Name=WP_000200323.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=CCO57_RS11330;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000200323.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 77519 78412 . - . ID=gene-CCO57_RS11335;Name=CCO57_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11335;old_locus_tag=CCO57_11320 NZ_NPMC01000006.1 Protein Homology CDS 77519 78412 . - 0 ID=cds-WP_000804298.1;Parent=gene-CCO57_RS11335;Dbxref=GenBank:WP_000804298.1;Name=WP_000804298.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=CCO57_RS11335;product=PhzF family isomerase;protein_id=WP_000804298.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 78518 79198 . - . ID=gene-CCO57_RS11340;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO57_RS11340;old_locus_tag=CCO57_11325 NZ_NPMC01000006.1 Protein Homology CDS 78518 79198 . - 0 ID=cds-WP_000617103.1;Parent=gene-CCO57_RS11340;Dbxref=GenBank:WP_000617103.1;Name=WP_000617103.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=CCO57_RS11340;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617103.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 79195 79890 . - . ID=gene-CCO57_RS11345;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=CCO57_RS11345;old_locus_tag=CCO57_11330 NZ_NPMC01000006.1 Protein Homology CDS 79195 79890 . - 0 ID=cds-WP_001166290.1;Parent=gene-CCO57_RS11345;Dbxref=GenBank:WP_001166290.1;Name=WP_001166290.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=CCO57_RS11345;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166290.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 79890 81434 . - . ID=gene-CCO57_RS11350;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO57_RS11350;old_locus_tag=CCO57_11335 NZ_NPMC01000006.1 Protein Homology CDS 79890 81434 . - 0 ID=cds-WP_000702595.1;Parent=gene-CCO57_RS11350;Dbxref=GenBank:WP_000702595.1;Name=WP_000702595.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=CCO57_RS11350;product=nitrate reductase subunit beta;protein_id=WP_000702595.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 81431 85171 . - . ID=gene-CCO57_RS11355;Name=CCO57_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11355;old_locus_tag=CCO57_11340 NZ_NPMC01000006.1 Protein Homology CDS 81431 85171 . - 0 ID=cds-WP_000040411.1;Parent=gene-CCO57_RS11355;Dbxref=GenBank:WP_000040411.1;Name=WP_000040411.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=CCO57_RS11355;product=nitrate reductase subunit alpha;protein_id=WP_000040411.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 85263 86651 . - . ID=gene-CCO57_RS11360;Name=CCO57_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11360;old_locus_tag=CCO57_11345 NZ_NPMC01000006.1 Protein Homology CDS 85263 86651 . - 0 ID=cds-WP_094914941.1;Parent=gene-CCO57_RS11360;Dbxref=GenBank:WP_094914941.1;Name=WP_094914941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=CCO57_RS11360;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_094914941.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 86865 87443 . - . ID=gene-CCO57_RS11365;Name=CCO57_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11365;old_locus_tag=CCO57_11350 NZ_NPMC01000006.1 Protein Homology CDS 86865 87443 . - 0 ID=cds-WP_000121038.1;Parent=gene-CCO57_RS11365;Dbxref=GenBank:WP_000121038.1;Name=WP_000121038.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=CCO57_RS11365;product=TetR family transcriptional regulator;protein_id=WP_000121038.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 87561 89048 . + . ID=gene-CCO57_RS11370;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=CCO57_RS11370;old_locus_tag=CCO57_11355 NZ_NPMC01000006.1 Protein Homology CDS 87561 89048 . + 0 ID=cds-WP_023233326.1;Parent=gene-CCO57_RS11370;Dbxref=GenBank:WP_023233326.1;Name=WP_023233326.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=CCO57_RS11370;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_023233326.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 89073 89453 . - . ID=gene-CCO57_RS11375;Name=CCO57_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11375;old_locus_tag=CCO57_11360 NZ_NPMC01000006.1 Protein Homology CDS 89073 89453 . - 0 ID=cds-WP_077905327.1;Parent=gene-CCO57_RS11375;Dbxref=GenBank:WP_077905327.1;Name=WP_077905327.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=CCO57_RS11375;product=GFA family protein;protein_id=WP_077905327.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 89597 90685 . - . ID=gene-CCO57_RS11380;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=CCO57_RS11380;old_locus_tag=CCO57_11365 NZ_NPMC01000006.1 Protein Homology CDS 89597 90685 . - 0 ID=cds-WP_000769035.1;Parent=gene-CCO57_RS11380;Dbxref=GenBank:WP_000769035.1;Name=WP_000769035.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=CCO57_RS11380;product=porin OmpD;protein_id=WP_000769035.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 91211 92092 . - . ID=gene-CCO57_RS11390;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=CCO57_RS11390;old_locus_tag=CCO57_11375 NZ_NPMC01000006.1 Protein Homology CDS 91211 92092 . - 0 ID=cds-WP_000203795.1;Parent=gene-CCO57_RS11390;Dbxref=GenBank:WP_000203795.1;Name=WP_000203795.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=CCO57_RS11390;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000203795.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 92370 95417 . + . ID=gene-CCO57_RS11400;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO57_RS11400;old_locus_tag=CCO57_11385 NZ_NPMC01000006.1 Protein Homology CDS 92370 95417 . + 0 ID=cds-WP_001574320.1;Parent=gene-CCO57_RS11400;Dbxref=GenBank:WP_001574320.1;Name=WP_001574320.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=CCO57_RS11400;product=formate dehydrogenase-N subunit alpha;protein_id=WP_001574320.1;transl_except=(pos:92955..92957%2Caa:Sec);transl_table=11 NZ_NPMC01000006.1 RefSeq gene 95431 96315 . + . ID=gene-CCO57_RS11405;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO57_RS11405;old_locus_tag=CCO57_11390 NZ_NPMC01000006.1 Protein Homology CDS 95431 96315 . + 0 ID=cds-WP_000061599.1;Parent=gene-CCO57_RS11405;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=CCO57_RS11405;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 96308 96964 . + . ID=gene-CCO57_RS11410;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=CCO57_RS11410;old_locus_tag=CCO57_11395 NZ_NPMC01000006.1 Protein Homology CDS 96308 96964 . + 0 ID=cds-WP_000045657.1;Parent=gene-CCO57_RS11410;Dbxref=GenBank:WP_000045657.1;Name=WP_000045657.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=CCO57_RS11410;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045657.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 97055 98065 . - . ID=gene-CCO57_RS11415;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=CCO57_RS11415;old_locus_tag=CCO57_11400 NZ_NPMC01000006.1 Protein Homology CDS 97055 98065 . - 0 ID=cds-WP_000642447.1;Parent=gene-CCO57_RS11415;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=CCO57_RS11415;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 98347 100044 . - . ID=gene-CCO57_RS11420;Name=CCO57_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11420;old_locus_tag=CCO57_11405 NZ_NPMC01000006.1 Protein Homology CDS 98347 100044 . - 0 ID=cds-WP_000450511.1;Parent=gene-CCO57_RS11420;Dbxref=GenBank:WP_000450511.1;Name=WP_000450511.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=CCO57_RS11420;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 100221 100364 . - . ID=gene-CCO57_RS11425;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=CCO57_RS11425;old_locus_tag=CCO57_11410 NZ_NPMC01000006.1 Protein Homology CDS 100221 100364 . - 0 ID=cds-WP_000841559.1;Parent=gene-CCO57_RS11425;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=CCO57_RS11425;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 100459 100674 . - . ID=gene-CCO57_RS11430;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=CCO57_RS11430;old_locus_tag=CCO57_11415 NZ_NPMC01000006.1 Protein Homology CDS 100459 100674 . - 0 ID=cds-WP_094888564.1;Parent=gene-CCO57_RS11430;Dbxref=GenBank:WP_094888564.1;Name=WP_094888564.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=CCO57_RS11430;product=biofilm-dependent modulation protein;protein_id=WP_094888564.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 101186 101617 . + . ID=gene-CCO57_RS11435;Name=CCO57_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11435;old_locus_tag=CCO57_11420 NZ_NPMC01000006.1 Protein Homology CDS 101186 101617 . + 0 ID=cds-WP_023218048.1;Parent=gene-CCO57_RS11435;Dbxref=GenBank:WP_023218048.1;Name=WP_023218048.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=CCO57_RS11435;product=OsmC family protein;protein_id=WP_023218048.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 101967 102296 . + . ID=gene-CCO57_RS11440;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=CCO57_RS11440;old_locus_tag=CCO57_11425 NZ_NPMC01000006.1 Protein Homology CDS 101967 102296 . + 0 ID=cds-WP_001032161.1;Parent=gene-CCO57_RS11440;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=CCO57_RS11440;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 102439 103224 . + . ID=gene-CCO57_RS11445;Name=CCO57_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11445;old_locus_tag=CCO57_11430 NZ_NPMC01000006.1 Protein Homology CDS 102439 103224 . + 0 ID=cds-WP_000698596.1;Parent=gene-CCO57_RS11445;Dbxref=GenBank:WP_000698596.1;Name=WP_000698596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=CCO57_RS11445;product=OBAP family protein;protein_id=WP_000698596.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 103353 105137 . + . ID=gene-CCO57_RS11450;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=CCO57_RS11450;old_locus_tag=CCO57_11435 NZ_NPMC01000006.1 Protein Homology CDS 103353 105137 . + 0 ID=cds-WP_094914942.1;Parent=gene-CCO57_RS11450;Dbxref=GenBank:WP_094914942.1;Name=WP_094914942.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=CCO57_RS11450;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_094914942.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 105134 107662 . + . ID=gene-CCO57_RS11455;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=CCO57_RS11455;old_locus_tag=CCO57_11440 NZ_NPMC01000006.1 Protein Homology CDS 105134 107662 . + 0 ID=cds-WP_094914943.1;Parent=gene-CCO57_RS11455;Dbxref=GenBank:WP_094914943.1;Name=WP_094914943.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=CCO57_RS11455;product=malto-oligosyltrehalose synthase;protein_id=WP_094914943.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 107719 109794 . + . ID=gene-CCO57_RS11460;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO57_RS11460;old_locus_tag=CCO57_11445 NZ_NPMC01000006.1 Protein Homology CDS 107719 109794 . + 0 ID=cds-WP_001527713.1;Parent=gene-CCO57_RS11460;Dbxref=GenBank:WP_001527713.1;Name=WP_001527713.1;Ontology_term=GO:0005980,GO:0004133,GO:0004553;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=CCO57_RS11460;product=glycogen debranching protein GlgX;protein_id=WP_001527713.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 109908 111110 . - . ID=gene-CCO57_RS11465;Name=CCO57_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11465;old_locus_tag=CCO57_11450 NZ_NPMC01000006.1 Protein Homology CDS 109908 111110 . - 0 ID=cds-WP_094914944.1;Parent=gene-CCO57_RS11465;Dbxref=GenBank:WP_094914944.1;Name=WP_094914944.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=CCO57_RS11465;product=MalY/PatB family protein;protein_id=WP_094914944.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 111123 112574 . - . ID=gene-CCO57_RS11470;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CCO57_RS11470;old_locus_tag=CCO57_11455 NZ_NPMC01000006.1 Protein Homology CDS 111123 112574 . - 0 ID=cds-WP_001276630.1;Parent=gene-CCO57_RS11470;Dbxref=GenBank:WP_001276630.1;Name=WP_001276630.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=CCO57_RS11470;product=Na+/H+ antiporter NhaC;protein_id=WP_001276630.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 112718 113725 . - . ID=gene-CCO57_RS11475;Name=CCO57_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11475;old_locus_tag=CCO57_11460 NZ_NPMC01000006.1 Protein Homology CDS 112718 113725 . - 0 ID=cds-WP_000201082.1;Parent=gene-CCO57_RS11475;Dbxref=GenBank:WP_000201082.1;Name=WP_000201082.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=CCO57_RS11475;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000201082.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 113983 115449 . + . ID=gene-CCO57_RS11480;Name=CCO57_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11480;old_locus_tag=CCO57_11465 NZ_NPMC01000006.1 Protein Homology CDS 113983 115449 . + 0 ID=cds-WP_000987832.1;Parent=gene-CCO57_RS11480;Dbxref=GenBank:WP_000987832.1;Name=WP_000987832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=CCO57_RS11480;product=hypothetical protein;protein_id=WP_000987832.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 115774 116922 . + . ID=gene-CCO57_RS11485;Name=CCO57_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11485;old_locus_tag=CCO57_11470 NZ_NPMC01000006.1 GeneMarkS-2+ CDS 115774 116922 . + 0 ID=cds-WP_094914945.1;Parent=gene-CCO57_RS11485;Dbxref=GenBank:WP_094914945.1;Name=WP_094914945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS11485;product=hypothetical protein;protein_id=WP_094914945.1;transl_table=11 NZ_NPMC01000006.1 RefSeq pseudogene 117123 117568 . + . ID=gene-CCO57_RS11495;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=CCO57_RS11495;old_locus_tag=CCO57_11480;pseudo=true NZ_NPMC01000006.1 Protein Homology CDS 117123 117568 . + 0 ID=cds-CCO57_RS11495;Parent=gene-CCO57_RS11495;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=CCO57_RS11495;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 117823 118803 . - . ID=gene-CCO57_RS11505;Name=CCO57_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11505;old_locus_tag=CCO57_11490 NZ_NPMC01000006.1 Protein Homology CDS 117823 118803 . - 0 ID=cds-WP_000876807.1;Parent=gene-CCO57_RS11505;Dbxref=GenBank:WP_000876807.1;Name=WP_000876807.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441349.1;locus_tag=CCO57_RS11505;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_000876807.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 118977 119885 . - . ID=gene-CCO57_RS11510;Name=CCO57_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11510;old_locus_tag=CCO57_11495 NZ_NPMC01000006.1 Protein Homology CDS 118977 119885 . - 0 ID=cds-WP_015405946.1;Parent=gene-CCO57_RS11510;Dbxref=GenBank:WP_015405946.1;Name=WP_015405946.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=CCO57_RS11510;product=LysR family transcriptional regulator;protein_id=WP_015405946.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 120287 120490 . + . ID=gene-CCO57_RS11515;Name=CCO57_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11515;old_locus_tag=CCO57_11500 NZ_NPMC01000006.1 Protein Homology CDS 120287 120490 . + 0 ID=cds-WP_001527829.1;Parent=gene-CCO57_RS11515;Dbxref=GenBank:WP_001527829.1;Name=WP_001527829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276020.1;locus_tag=CCO57_RS11515;product=DUF29 family protein;protein_id=WP_001527829.1;transl_table=11 NZ_NPMC01000006.1 RefSeq pseudogene 120837 121412 . + . ID=gene-CCO57_RS11525;Name=CCO57_RS11525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS11525;old_locus_tag=CCO57_11510;pseudo=true NZ_NPMC01000006.1 Protein Homology CDS 120837 121412 . + 0 ID=cds-CCO57_RS11525;Parent=gene-CCO57_RS11525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280606.1;locus_tag=CCO57_RS11525;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 121491 121823 . - . ID=gene-CCO57_RS11530;Name=CCO57_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11530;old_locus_tag=CCO57_11515 NZ_NPMC01000006.1 Protein Homology CDS 121491 121823 . - 0 ID=cds-WP_000253166.1;Parent=gene-CCO57_RS11530;Dbxref=GenBank:WP_000253166.1;Name=WP_000253166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=CCO57_RS11530;product=DUF1493 family protein;protein_id=WP_000253166.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 121817 122275 . - . ID=gene-CCO57_RS11535;Name=CCO57_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11535;old_locus_tag=CCO57_11520 NZ_NPMC01000006.1 Protein Homology CDS 121817 122275 . - 0 ID=cds-WP_000381836.1;Parent=gene-CCO57_RS11535;Dbxref=GenBank:WP_000381836.1;Name=WP_000381836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_090138499.1;locus_tag=CCO57_RS11535;product=STM2901 family protein;protein_id=WP_000381836.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 122575 122823 . + . ID=gene-CCO57_RS11540;Name=CCO57_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11540;old_locus_tag=CCO57_11525 NZ_NPMC01000006.1 Protein Homology CDS 122575 122823 . + 0 ID=cds-WP_000885424.1;Parent=gene-CCO57_RS11540;Dbxref=GenBank:WP_000885424.1;Name=WP_000885424.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=CCO57_RS11540;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 122813 123097 . + . ID=gene-CCO57_RS11545;Name=CCO57_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11545;old_locus_tag=CCO57_11530 NZ_NPMC01000006.1 Protein Homology CDS 122813 123097 . + 0 ID=cds-WP_000221343.1;Parent=gene-CCO57_RS11545;Dbxref=GenBank:WP_000221343.1;Name=WP_000221343.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=CCO57_RS11545;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221343.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 123268 123657 . + . ID=gene-CCO57_RS11550;Name=CCO57_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11550;old_locus_tag=CCO57_11535 NZ_NPMC01000006.1 Protein Homology CDS 123268 123657 . + 0 ID=cds-WP_000194089.1;Parent=gene-CCO57_RS11550;Dbxref=GenBank:WP_000194089.1;Name=WP_000194089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=CCO57_RS11550;product=RidA family protein;protein_id=WP_000194089.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 123715 124788 . - . ID=gene-CCO57_RS11555;Name=CCO57_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11555;old_locus_tag=CCO57_11540 NZ_NPMC01000006.1 Protein Homology CDS 123715 124788 . - 0 ID=cds-WP_024155154.1;Parent=gene-CCO57_RS11555;Dbxref=GenBank:WP_024155154.1;Name=WP_024155154.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527732.1;locus_tag=CCO57_RS11555;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_024155154.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 124981 125469 . - . ID=gene-CCO57_RS11560;Name=CCO57_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11560;old_locus_tag=CCO57_11545 NZ_NPMC01000006.1 Protein Homology CDS 124981 125469 . - 0 ID=cds-WP_023213482.1;Parent=gene-CCO57_RS11560;Dbxref=GenBank:WP_023213482.1;Name=WP_023213482.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=CCO57_RS11560;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_023213482.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 125514 127022 . + . ID=gene-CCO57_RS11565;Name=CCO57_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11565;old_locus_tag=CCO57_11550 NZ_NPMC01000006.1 Protein Homology CDS 125514 127022 . + 0 ID=cds-WP_079915721.1;Parent=gene-CCO57_RS11565;Dbxref=GenBank:WP_079915721.1;Name=WP_079915721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=CCO57_RS11565;product=FAD-dependent oxidoreductase;protein_id=WP_079915721.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 127012 128253 . + . ID=gene-CCO57_RS11570;Name=CCO57_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11570;old_locus_tag=CCO57_11555 NZ_NPMC01000006.1 Protein Homology CDS 127012 128253 . + 0 ID=cds-WP_001095734.1;Parent=gene-CCO57_RS11570;Dbxref=GenBank:WP_001095734.1;Name=WP_001095734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=CCO57_RS11570;product=MFS transporter;protein_id=WP_001095734.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 128323 129879 . + . ID=gene-CCO57_RS11575;Name=CCO57_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11575;old_locus_tag=CCO57_11560 NZ_NPMC01000006.1 Protein Homology CDS 128323 129879 . + 0 ID=cds-WP_001634154.1;Parent=gene-CCO57_RS11575;Dbxref=GenBank:WP_001634154.1;Name=WP_001634154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=CCO57_RS11575;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_001634154.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 130056 131342 . + . ID=gene-CCO57_RS11580;Name=CCO57_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11580;old_locus_tag=CCO57_11565 NZ_NPMC01000006.1 Protein Homology CDS 130056 131342 . + 0 ID=cds-WP_000824227.1;Parent=gene-CCO57_RS11580;Dbxref=GenBank:WP_000824227.1;Name=WP_000824227.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=CCO57_RS11580;product=MFS transporter;protein_id=WP_000824227.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 131317 132342 . + . ID=gene-CCO57_RS11585;Name=CCO57_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11585;old_locus_tag=CCO57_11570 NZ_NPMC01000006.1 Protein Homology CDS 131317 132342 . + 0 ID=cds-WP_020898762.1;Parent=gene-CCO57_RS11585;Dbxref=GenBank:WP_020898762.1;Name=WP_020898762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=CCO57_RS11585;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_020898762.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 132401 133072 . - . ID=gene-CCO57_RS11590;Name=CCO57_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11590;old_locus_tag=CCO57_11575 NZ_NPMC01000006.1 Protein Homology CDS 132401 133072 . - 0 ID=cds-WP_000236521.1;Parent=gene-CCO57_RS11590;Dbxref=GenBank:WP_000236521.1;Name=WP_000236521.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=CCO57_RS11590;product=FadR/GntR family transcriptional regulator;protein_id=WP_000236521.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 133238 134329 . - . ID=gene-CCO57_RS11595;Name=CCO57_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11595;old_locus_tag=CCO57_11580 NZ_NPMC01000006.1 Protein Homology CDS 133238 134329 . - 0 ID=cds-WP_094914947.1;Parent=gene-CCO57_RS11595;Dbxref=GenBank:WP_094914947.1;Name=WP_094914947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=CCO57_RS11595;product=choloylglycine hydrolase family protein;protein_id=WP_094914947.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 134758 135861 . + . ID=gene-CCO57_RS11600;Name=CCO57_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11600;old_locus_tag=CCO57_11585 NZ_NPMC01000006.1 Protein Homology CDS 134758 135861 . + 0 ID=cds-WP_001194448.1;Parent=gene-CCO57_RS11600;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=CCO57_RS11600;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 135864 137666 . + . ID=gene-CCO57_RS11605;Name=CCO57_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11605;old_locus_tag=CCO57_11590 NZ_NPMC01000006.1 Protein Homology CDS 135864 137666 . + 0 ID=cds-WP_000331200.1;Parent=gene-CCO57_RS11605;Dbxref=GenBank:WP_000331200.1;Name=WP_000331200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=CCO57_RS11605;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331200.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 137617 138360 . + . ID=gene-CCO57_RS11610;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=CCO57_RS11610;old_locus_tag=CCO57_11595 NZ_NPMC01000006.1 Protein Homology CDS 137617 138360 . + 0 ID=cds-WP_000924455.1;Parent=gene-CCO57_RS11610;Dbxref=GenBank:WP_000924455.1;Name=WP_000924455.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=CCO57_RS11610;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924455.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 138366 138974 . + . ID=gene-CCO57_RS11615;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=CCO57_RS11615;old_locus_tag=CCO57_11600 NZ_NPMC01000006.1 Protein Homology CDS 138366 138974 . + 0 ID=cds-WP_000852664.1;Parent=gene-CCO57_RS11615;Dbxref=GenBank:WP_000852664.1;Name=WP_000852664.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=CCO57_RS11615;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852664.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 138974 139273 . + . ID=gene-CCO57_RS11620;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO57_RS11620;old_locus_tag=CCO57_11605 NZ_NPMC01000006.1 Protein Homology CDS 138974 139273 . + 0 ID=cds-WP_000334907.1;Parent=gene-CCO57_RS11620;Dbxref=GenBank:WP_000334907.1;Name=WP_000334907.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=CCO57_RS11620;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334907.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 139270 139680 . + . ID=gene-CCO57_RS11625;Name=CCO57_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11625;old_locus_tag=CCO57_11610 NZ_NPMC01000006.1 Protein Homology CDS 139270 139680 . + 0 ID=cds-WP_000155977.1;Parent=gene-CCO57_RS11625;Dbxref=GenBank:WP_000155977.1;Name=WP_000155977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=CCO57_RS11625;product=hydrogenase;protein_id=WP_000155977.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 139698 140759 . + . ID=gene-CCO57_RS11630;Name=CCO57_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11630;old_locus_tag=CCO57_11615 NZ_NPMC01000006.1 Protein Homology CDS 139698 140759 . + 0 ID=cds-WP_086776896.1;Parent=gene-CCO57_RS11630;Dbxref=GenBank:WP_086776896.1;Name=WP_086776896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=CCO57_RS11630;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_086776896.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 140747 141634 . + . ID=gene-CCO57_RS11635;Name=CCO57_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11635;old_locus_tag=CCO57_11620 NZ_NPMC01000006.1 Protein Homology CDS 140747 141634 . + 0 ID=cds-WP_094914948.1;Parent=gene-CCO57_RS11635;Dbxref=GenBank:WP_094914948.1;Name=WP_094914948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=CCO57_RS11635;product=ATP/GTP-binding protein;protein_id=WP_094914948.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 141647 141988 . + . ID=gene-CCO57_RS11640;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO57_RS11640;old_locus_tag=CCO57_11625 NZ_NPMC01000006.1 Protein Homology CDS 141647 141988 . + 0 ID=cds-WP_000544772.1;Parent=gene-CCO57_RS11640;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=CCO57_RS11640;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 142129 143247 . - . ID=gene-CCO57_RS11645;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO57_RS11645;old_locus_tag=CCO57_11630 NZ_NPMC01000006.1 Protein Homology CDS 142129 143247 . - 0 ID=cds-WP_000758335.1;Parent=gene-CCO57_RS11645;Dbxref=GenBank:WP_000758335.1;Name=WP_000758335.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=CCO57_RS11645;product=porin OmpC;protein_id=WP_000758335.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 143964 144506 . + . ID=gene-CCO57_RS11650;Name=CCO57_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11650;old_locus_tag=CCO57_11635 NZ_NPMC01000006.1 Protein Homology CDS 143964 144506 . + 0 ID=cds-WP_000513122.1;Parent=gene-CCO57_RS11650;Dbxref=GenBank:WP_000513122.1;Name=WP_000513122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=CCO57_RS11650;product=YybH family protein;protein_id=WP_000513122.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 144562 145476 . - . ID=gene-CCO57_RS11655;Name=CCO57_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11655;old_locus_tag=CCO57_11640 NZ_NPMC01000006.1 Protein Homology CDS 144562 145476 . - 0 ID=cds-WP_023199838.1;Parent=gene-CCO57_RS11655;Dbxref=GenBank:WP_023199838.1;Name=WP_023199838.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=CCO57_RS11655;product=bestrophin family protein;protein_id=WP_023199838.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 145733 146092 . - . ID=gene-CCO57_RS11660;Name=CCO57_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11660;old_locus_tag=CCO57_11645 NZ_NPMC01000006.1 Protein Homology CDS 145733 146092 . - 0 ID=cds-WP_000992449.1;Parent=gene-CCO57_RS11660;Dbxref=GenBank:WP_000992449.1;Name=WP_000992449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=CCO57_RS11660;product=DUF4186 domain-containing protein;protein_id=WP_000992449.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 146092 147018 . - . ID=gene-CCO57_RS11665;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=CCO57_RS11665;old_locus_tag=CCO57_11650 NZ_NPMC01000006.1 Protein Homology CDS 146092 147018 . - 0 ID=cds-WP_000090081.1;Parent=gene-CCO57_RS11665;Dbxref=GenBank:WP_000090081.1;Name=WP_000090081.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=CCO57_RS11665;product=glutaminase B;protein_id=WP_000090081.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 147091 148479 . - . ID=gene-CCO57_RS11670;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=CCO57_RS11670;old_locus_tag=CCO57_11655 NZ_NPMC01000006.1 Protein Homology CDS 147091 148479 . - 0 ID=cds-WP_094914949.1;Parent=gene-CCO57_RS11670;Dbxref=GenBank:WP_094914949.1;Name=WP_094914949.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=CCO57_RS11670;product=succinate-semialdehyde dehydrogenase;protein_id=WP_094914949.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 148582 149454 . + . ID=gene-CCO57_RS11675;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=CCO57_RS11675;old_locus_tag=CCO57_11660 NZ_NPMC01000006.1 Protein Homology CDS 148582 149454 . + 0 ID=cds-WP_000366541.1;Parent=gene-CCO57_RS11675;Dbxref=GenBank:WP_000366541.1;Name=WP_000366541.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=CCO57_RS11675;product=putrescine utilization regulator PtrR;protein_id=WP_000366541.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 149570 150760 . + . ID=gene-CCO57_RS11680;Name=CCO57_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11680;old_locus_tag=CCO57_11665 NZ_NPMC01000006.1 Protein Homology CDS 149570 150760 . + 0 ID=cds-WP_000154613.1;Parent=gene-CCO57_RS11680;Dbxref=GenBank:WP_000154613.1;Name=WP_000154613.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=CCO57_RS11680;product=sugar transporter;protein_id=WP_000154613.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 150807 151472 . - . ID=gene-CCO57_RS11685;Name=CCO57_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11685;old_locus_tag=CCO57_11670 NZ_NPMC01000006.1 Protein Homology CDS 150807 151472 . - 0 ID=cds-WP_000968968.1;Parent=gene-CCO57_RS11685;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=CCO57_RS11685;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 151731 152165 . + . ID=gene-CCO57_RS11690;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=CCO57_RS11690;old_locus_tag=CCO57_11675 NZ_NPMC01000006.1 Protein Homology CDS 151731 152165 . + 0 ID=cds-WP_000843434.1;Parent=gene-CCO57_RS11690;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=CCO57_RS11690;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 152185 152568 . + . ID=gene-CCO57_RS11695;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=CCO57_RS11695;old_locus_tag=CCO57_11680 NZ_NPMC01000006.1 Protein Homology CDS 152185 152568 . + 0 ID=cds-WP_000091194.1;Parent=gene-CCO57_RS11695;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=CCO57_RS11695;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 152597 152812 . + . ID=gene-CCO57_RS11700;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=CCO57_RS11700;old_locus_tag=CCO57_11685 NZ_NPMC01000006.1 Protein Homology CDS 152597 152812 . + 0 ID=cds-WP_000783049.1;Parent=gene-CCO57_RS11700;Dbxref=GenBank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=CCO57_RS11700;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 152930 153832 . - . ID=gene-CCO57_RS11705;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=CCO57_RS11705;old_locus_tag=CCO57_11690 NZ_NPMC01000006.1 Protein Homology CDS 152930 153832 . - 0 ID=cds-WP_000987754.1;Parent=gene-CCO57_RS11705;Dbxref=GenBank:WP_000987754.1;Name=WP_000987754.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=CCO57_RS11705;product=O-acetylserine/cysteine exporter;protein_id=WP_000987754.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 154060 155247 . + . ID=gene-CCO57_RS11710;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=CCO57_RS11710;old_locus_tag=CCO57_11695 NZ_NPMC01000006.1 Protein Homology CDS 154060 155247 . + 0 ID=cds-WP_001070320.1;Parent=gene-CCO57_RS11710;Dbxref=GenBank:WP_001070320.1;Name=WP_001070320.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=CCO57_RS11710;product=efflux MFS transporter YdeE;protein_id=WP_001070320.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 155495 155590 . + . ID=gene-CCO57_RS11715;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=CCO57_RS11715;old_locus_tag=CCO57_11700 NZ_NPMC01000006.1 Protein Homology CDS 155495 155590 . + 0 ID=cds-WP_000901531.1;Parent=gene-CCO57_RS11715;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=CCO57_RS11715;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 155939 156331 . - . ID=gene-CCO57_RS11720;Name=CCO57_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11720;old_locus_tag=CCO57_11705 NZ_NPMC01000006.1 Protein Homology CDS 155939 156331 . - 0 ID=cds-WP_000775494.1;Parent=gene-CCO57_RS11720;Dbxref=GenBank:WP_000775494.1;Name=WP_000775494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=CCO57_RS11720;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000775494.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 156758 157285 . + . ID=gene-CCO57_RS11725;Name=CCO57_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11725;old_locus_tag=CCO57_11710 NZ_NPMC01000006.1 Protein Homology CDS 156758 157285 . + 0 ID=cds-WP_001235359.1;Parent=gene-CCO57_RS11725;Dbxref=GenBank:WP_001235359.1;Name=WP_001235359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=CCO57_RS11725;product=2-oxo-tetronate isomerase;protein_id=WP_001235359.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 157405 157587 . - . ID=gene-CCO57_RS11730;Name=CCO57_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11730;old_locus_tag=CCO57_11715 NZ_NPMC01000006.1 Protein Homology CDS 157405 157587 . - 0 ID=cds-WP_000807642.1;Parent=gene-CCO57_RS11730;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=CCO57_RS11730;product=general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 157932 159974 . - . ID=gene-CCO57_RS11740;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=CCO57_RS11740;old_locus_tag=CCO57_11725 NZ_NPMC01000006.1 Protein Homology CDS 157932 159974 . - 0 ID=cds-WP_094914950.1;Parent=gene-CCO57_RS11740;Dbxref=GenBank:WP_094914950.1;Name=WP_094914950.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=CCO57_RS11740;product=peptidyl-dipeptidase Dcp;protein_id=WP_094914950.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 160113 160859 . + . ID=gene-CCO57_RS11745;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=CCO57_RS11745;old_locus_tag=CCO57_11730 NZ_NPMC01000006.1 Protein Homology CDS 160113 160859 . + 0 ID=cds-WP_000636564.1;Parent=gene-CCO57_RS11745;Dbxref=GenBank:WP_000636564.1;Name=WP_000636564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=CCO57_RS11745;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 160989 161675 . + . ID=gene-CCO57_RS11750;Name=CCO57_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11750;old_locus_tag=CCO57_11735 NZ_NPMC01000006.1 Protein Homology CDS 160989 161675 . + 0 ID=cds-WP_000215562.1;Parent=gene-CCO57_RS11750;Dbxref=GenBank:WP_000215562.1;Name=WP_000215562.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=CCO57_RS11750;product=GntR family transcriptional regulator;protein_id=WP_000215562.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 161856 162059 . + . ID=gene-CCO57_RS11755;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=CCO57_RS11755;old_locus_tag=CCO57_11740 NZ_NPMC01000006.1 Protein Homology CDS 161856 162059 . + 0 ID=cds-WP_000989267.1;Parent=gene-CCO57_RS11755;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=CCO57_RS11755;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 162126 163592 . - . ID=gene-CCO57_RS11760;Name=CCO57_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11760;old_locus_tag=CCO57_11745 NZ_NPMC01000006.1 Protein Homology CDS 162126 163592 . - 0 ID=cds-WP_094914951.1;Parent=gene-CCO57_RS11760;Dbxref=GenBank:WP_094914951.1;Name=WP_094914951.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=CCO57_RS11760;product=mannitol dehydrogenase family protein;protein_id=WP_094914951.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 163736 165115 . - . ID=gene-CCO57_RS11765;Name=CCO57_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11765;old_locus_tag=CCO57_11750 NZ_NPMC01000006.1 Protein Homology CDS 163736 165115 . - 0 ID=cds-WP_094914952.1;Parent=gene-CCO57_RS11765;Dbxref=GenBank:WP_094914952.1;Name=WP_094914952.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=CCO57_RS11765;product=MFS transporter;protein_id=WP_094914952.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 165169 166188 . - . ID=gene-CCO57_RS11770;Name=CCO57_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11770;old_locus_tag=CCO57_11755 NZ_NPMC01000006.1 Protein Homology CDS 165169 166188 . - 0 ID=cds-WP_000836487.1;Parent=gene-CCO57_RS11770;Dbxref=GenBank:WP_000836487.1;Name=WP_000836487.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=CCO57_RS11770;product=Zn-dependent oxidoreductase;protein_id=WP_000836487.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 166199 167413 . - . ID=gene-CCO57_RS11775;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=CCO57_RS11775;old_locus_tag=CCO57_11760 NZ_NPMC01000006.1 Protein Homology CDS 166199 167413 . - 0 ID=cds-WP_001644449.1;Parent=gene-CCO57_RS11775;Dbxref=GenBank:WP_001644449.1;Name=WP_001644449.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=CCO57_RS11775;product=starvation-sensing protein RspA;protein_id=WP_001644449.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 167535 167861 . - . ID=gene-CCO57_RS11780;Name=CCO57_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11780;old_locus_tag=CCO57_11765 NZ_NPMC01000006.1 Protein Homology CDS 167535 167861 . - 0 ID=cds-WP_000921389.1;Parent=gene-CCO57_RS11780;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=CCO57_RS11780;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 168014 168355 . + . ID=gene-CCO57_RS11785;Name=CCO57_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11785;old_locus_tag=CCO57_11770 NZ_NPMC01000006.1 Protein Homology CDS 168014 168355 . + 0 ID=cds-WP_001066440.1;Parent=gene-CCO57_RS11785;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=CCO57_RS11785;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 168391 168951 . + . ID=gene-CCO57_RS11790;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=CCO57_RS11790;old_locus_tag=CCO57_11775 NZ_NPMC01000006.1 Protein Homology CDS 168391 168951 . + 0 ID=cds-WP_000199997.1;Parent=gene-CCO57_RS11790;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=CCO57_RS11790;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 168992 169702 . - . ID=gene-CCO57_RS11795;Name=CCO57_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11795;old_locus_tag=CCO57_11780 NZ_NPMC01000006.1 Protein Homology CDS 168992 169702 . - 0 ID=cds-WP_000743114.1;Parent=gene-CCO57_RS11795;Dbxref=GenBank:WP_000743114.1;Name=WP_000743114.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=CCO57_RS11795;product=YnfC family lipoprotein;protein_id=WP_000743114.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 169806 170114 . + . ID=gene-CCO57_RS11800;Name=CCO57_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11800;old_locus_tag=CCO57_11785 NZ_NPMC01000006.1 Protein Homology CDS 169806 170114 . + 0 ID=cds-WP_000975514.1;Parent=gene-CCO57_RS11800;Dbxref=GenBank:WP_000975514.1;Name=WP_000975514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=CCO57_RS11800;product=DUF1161 domain-containing protein;protein_id=WP_000975514.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 170271 172709 . + . ID=gene-CCO57_RS11805;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=CCO57_RS11805;old_locus_tag=CCO57_11790 NZ_NPMC01000006.1 Protein Homology CDS 170271 172709 . + 0 ID=cds-WP_094914953.1;Parent=gene-CCO57_RS11805;Dbxref=GenBank:WP_094914953.1;Name=WP_094914953.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=CCO57_RS11805;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_094914953.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 172807 175242 . + . ID=gene-CCO57_RS11810;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=CCO57_RS11810;old_locus_tag=CCO57_11795 NZ_NPMC01000006.1 Protein Homology CDS 172807 175242 . + 0 ID=cds-WP_094914954.1;Parent=gene-CCO57_RS11810;Dbxref=GenBank:WP_094914954.1;Name=WP_094914954.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=CCO57_RS11810;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_094914954.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 175253 175870 . + . ID=gene-CCO57_RS11815;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO57_RS11815;old_locus_tag=CCO57_11800 NZ_NPMC01000006.1 Protein Homology CDS 175253 175870 . + 0 ID=cds-WP_000213072.1;Parent=gene-CCO57_RS11815;Dbxref=GenBank:WP_000213072.1;Name=WP_000213072.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO57_RS11815;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213072.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 175872 176729 . + . ID=gene-CCO57_RS11820;Name=CCO57_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11820;old_locus_tag=CCO57_11805 NZ_NPMC01000006.1 Protein Homology CDS 175872 176729 . + 0 ID=cds-WP_000534698.1;Parent=gene-CCO57_RS11820;Dbxref=GenBank:WP_000534698.1;Name=WP_000534698.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=CCO57_RS11820;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534698.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 176772 177386 . + . ID=gene-CCO57_RS11825;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=CCO57_RS11825;old_locus_tag=CCO57_11810 NZ_NPMC01000006.1 Protein Homology CDS 176772 177386 . + 0 ID=cds-WP_000206565.1;Parent=gene-CCO57_RS11825;Dbxref=GenBank:WP_000206565.1;Name=WP_000206565.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=CCO57_RS11825;product=Tat proofreading chaperone DmsD;protein_id=WP_000206565.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 177691 178401 . + . ID=gene-CCO57_RS11830;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO57_RS11830;old_locus_tag=CCO57_11815 NZ_NPMC01000006.1 Protein Homology CDS 177691 178401 . + 0 ID=cds-WP_000557304.1;Parent=gene-CCO57_RS11830;Dbxref=GenBank:WP_000557304.1;Name=WP_000557304.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=CCO57_RS11830;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000557304.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 178430 179332 . + . ID=gene-CCO57_RS11835;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=CCO57_RS11835;old_locus_tag=CCO57_11820 NZ_NPMC01000006.1 Protein Homology CDS 178430 179332 . + 0 ID=cds-WP_001211193.1;Parent=gene-CCO57_RS11835;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=CCO57_RS11835;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 179342 179989 . + . ID=gene-CCO57_RS11840;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=CCO57_RS11840;old_locus_tag=CCO57_11825 NZ_NPMC01000006.1 Protein Homology CDS 179342 179989 . + 0 ID=cds-WP_000379677.1;Parent=gene-CCO57_RS11840;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=CCO57_RS11840;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 179989 181137 . + . ID=gene-CCO57_RS11845;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=CCO57_RS11845;old_locus_tag=CCO57_11830 NZ_NPMC01000006.1 Protein Homology CDS 179989 181137 . + 0 ID=cds-WP_080097110.1;Parent=gene-CCO57_RS11845;Dbxref=GenBank:WP_080097110.1;Name=WP_080097110.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=CCO57_RS11845;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_080097110.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 181273 182562 . + . ID=gene-CCO57_RS11850;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=CCO57_RS11850;old_locus_tag=CCO57_11835 NZ_NPMC01000006.1 Protein Homology CDS 181273 182562 . + 0 ID=cds-WP_000554911.1;Parent=gene-CCO57_RS11850;Dbxref=GenBank:WP_000554911.1;Name=WP_000554911.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=CCO57_RS11850;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554911.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 182518 183213 . - . ID=gene-CCO57_RS11855;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO57_RS11855;old_locus_tag=CCO57_11840 NZ_NPMC01000006.1 Protein Homology CDS 182518 183213 . - 0 ID=cds-WP_000919206.1;Parent=gene-CCO57_RS11855;Dbxref=GenBank:WP_000919206.1;Name=WP_000919206.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=CCO57_RS11855;product=dethiobiotin synthase;protein_id=WP_000919206.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 183339 184559 . - . ID=gene-CCO57_RS11860;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=CCO57_RS11860;old_locus_tag=CCO57_11845 NZ_NPMC01000006.1 Protein Homology CDS 183339 184559 . - 0 ID=cds-WP_000225087.1;Parent=gene-CCO57_RS11860;Dbxref=GenBank:WP_000225087.1;Name=WP_000225087.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=CCO57_RS11860;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225087.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 184687 185586 . - . ID=gene-CCO57_RS11870;Name=CCO57_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11870;old_locus_tag=CCO57_11855 NZ_NPMC01000006.1 Protein Homology CDS 184687 185586 . - 0 ID=cds-WP_001019577.1;Parent=gene-CCO57_RS11870;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=CCO57_RS11870;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 185706 186959 . + . ID=gene-CCO57_RS11875;Name=CCO57_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11875;old_locus_tag=CCO57_11860 NZ_NPMC01000006.1 Protein Homology CDS 185706 186959 . + 0 ID=cds-WP_023232814.1;Parent=gene-CCO57_RS11875;Dbxref=GenBank:WP_023232814.1;Name=WP_023232814.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=CCO57_RS11875;product=MFS transporter;protein_id=WP_023232814.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 187026 187118 . - . ID=gene-CCO57_RS24595;Name=CCO57_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24595 NZ_NPMC01000006.1 Protein Homology CDS 187026 187118 . - 0 ID=cds-WP_001068154.1;Parent=gene-CCO57_RS24595;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=CCO57_RS24595;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 187354 187602 . + . ID=gene-CCO57_RS11880;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=CCO57_RS11880;old_locus_tag=CCO57_11865 NZ_NPMC01000006.1 Protein Homology CDS 187354 187602 . + 0 ID=cds-WP_000756317.1;Parent=gene-CCO57_RS11880;Dbxref=GenBank:WP_000756317.1;Name=WP_000756317.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=CCO57_RS11880;product=acid resistance repetitive basic protein Asr;protein_id=WP_000756317.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 187871 188692 . + . ID=gene-CCO57_RS11890;Name=CCO57_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11890;old_locus_tag=CCO57_11875 NZ_NPMC01000006.1 Protein Homology CDS 187871 188692 . + 0 ID=cds-WP_000549654.1;Parent=gene-CCO57_RS11890;Dbxref=GenBank:WP_000549654.1;Name=WP_000549654.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=CCO57_RS11890;product=trypsin-like serine peptidase;protein_id=WP_000549654.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 188732 189061 . - . ID=gene-CCO57_RS11895;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=CCO57_RS11895;old_locus_tag=CCO57_11880 NZ_NPMC01000006.1 Protein Homology CDS 188732 189061 . - 0 ID=cds-WP_001183821.1;Parent=gene-CCO57_RS11895;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=CCO57_RS11895;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 189048 189410 . - . ID=gene-CCO57_RS11900;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=CCO57_RS11900;old_locus_tag=CCO57_11885 NZ_NPMC01000006.1 Protein Homology CDS 189048 189410 . - 0 ID=cds-WP_000500279.1;Parent=gene-CCO57_RS11900;Dbxref=GenBank:WP_000500279.1;Name=WP_000500279.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=CCO57_RS11900;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500279.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 189522 189692 . - . ID=gene-CCO57_RS24960;Name=CCO57_RS24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24960;old_locus_tag=CCO57_11890 NZ_NPMC01000006.1 Protein Homology CDS 189522 189692 . - 0 ID=cds-WP_001539987.1;Parent=gene-CCO57_RS24960;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=CCO57_RS24960;product=hypothetical protein;protein_id=WP_001539987.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 189828 190862 . + . ID=gene-CCO57_RS11910;Name=CCO57_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11910;old_locus_tag=CCO57_11895 NZ_NPMC01000006.1 Protein Homology CDS 189828 190862 . + 0 ID=cds-WP_001118268.1;Parent=gene-CCO57_RS11910;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=CCO57_RS11910;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 191037 192425 . - . ID=gene-CCO57_RS11915;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=CCO57_RS11915;old_locus_tag=CCO57_11900 NZ_NPMC01000006.1 Protein Homology CDS 191037 192425 . - 0 ID=cds-WP_000014056.1;Parent=gene-CCO57_RS11915;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=CCO57_RS11915;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 192436 193965 . - . ID=gene-CCO57_RS11920;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=CCO57_RS11920;old_locus_tag=CCO57_11905 NZ_NPMC01000006.1 Protein Homology CDS 192436 193965 . - 0 ID=cds-WP_001219354.1;Parent=gene-CCO57_RS11920;Dbxref=GenBank:WP_001219354.1;Name=WP_001219354.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=CCO57_RS11920;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219354.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 194492 195436 . + . ID=gene-CCO57_RS11925;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=CCO57_RS11925;old_locus_tag=CCO57_11910 NZ_NPMC01000006.1 Protein Homology CDS 194492 195436 . + 0 ID=cds-WP_000769292.1;Parent=gene-CCO57_RS11925;Dbxref=GenBank:WP_000769292.1;Name=WP_000769292.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=CCO57_RS11925;product=DUF1471 family protein YdgH;protein_id=WP_000769292.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 195735 197117 . + . ID=gene-CCO57_RS11930;Name=CCO57_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11930;old_locus_tag=CCO57_11915 NZ_NPMC01000006.1 Protein Homology CDS 195735 197117 . + 0 ID=cds-WP_000412353.1;Parent=gene-CCO57_RS11930;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=CCO57_RS11930;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 197179 197514 . - . ID=gene-CCO57_RS11935;Name=CCO57_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11935;old_locus_tag=CCO57_11920 NZ_NPMC01000006.1 Protein Homology CDS 197179 197514 . - 0 ID=cds-WP_000524877.1;Parent=gene-CCO57_RS11935;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=CCO57_RS11935;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 197641 198372 . + . ID=gene-CCO57_RS11940;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=CCO57_RS11940;old_locus_tag=CCO57_11925 NZ_NPMC01000006.1 Protein Homology CDS 197641 198372 . + 0 ID=cds-WP_001080047.1;Parent=gene-CCO57_RS11940;Dbxref=GenBank:WP_001080047.1;Name=WP_001080047.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=CCO57_RS11940;product=two-component system response regulator RstA;protein_id=WP_001080047.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 198851 200002 . + . ID=gene-CCO57_RS11950;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=CCO57_RS11950;old_locus_tag=CCO57_11935 NZ_NPMC01000006.1 Protein Homology CDS 198851 200002 . + 0 ID=cds-WP_000824303.1;Parent=gene-CCO57_RS11950;Dbxref=GenBank:WP_000824303.1;Name=WP_000824303.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=CCO57_RS11950;product=porin OmpS2;protein_id=WP_000824303.1;transl_table=11 NZ_NPMC01000006.1 RefSeq pseudogene 200155 201869 . + . ID=gene-CCO57_RS11955;Name=CCO57_RS11955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS11955;old_locus_tag=CCO57_11940;pseudo=true NZ_NPMC01000006.1 Protein Homology CDS 200155 201869 . + 0 ID=cds-CCO57_RS11955;Parent=gene-CCO57_RS11955;Note=frameshifted;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=CCO57_RS11955;product=amidohydrolase;pseudo=true;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 201980 203281 . + . ID=gene-CCO57_RS11960;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=CCO57_RS11960;old_locus_tag=CCO57_11945 NZ_NPMC01000006.1 Protein Homology CDS 201980 203281 . + 0 ID=cds-WP_023257725.1;Parent=gene-CCO57_RS11960;Dbxref=GenBank:WP_023257725.1;Name=WP_023257725.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=CCO57_RS11960;product=two-component system sensor histidine kinase RstB;protein_id=WP_023257725.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 203357 204286 . + . ID=gene-CCO57_RS11965;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=CCO57_RS11965;old_locus_tag=CCO57_11950 NZ_NPMC01000006.1 Protein Homology CDS 203357 204286 . + 0 ID=cds-WP_000092497.1;Parent=gene-CCO57_RS11965;Dbxref=GenBank:WP_000092497.1;Name=WP_000092497.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=CCO57_RS11965;product=DNA replication terminus site-binding protein;protein_id=WP_000092497.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 204283 205686 . - . ID=gene-CCO57_RS11970;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CCO57_RS11970;old_locus_tag=CCO57_11955 NZ_NPMC01000006.1 Protein Homology CDS 204283 205686 . - 0 ID=cds-WP_000259117.1;Parent=gene-CCO57_RS11970;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=CCO57_RS11970;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 205854 207500 . - . ID=gene-CCO57_RS11975;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=CCO57_RS11975;old_locus_tag=CCO57_11960 NZ_NPMC01000006.1 Protein Homology CDS 205854 207500 . - 0 ID=cds-WP_000066609.1;Parent=gene-CCO57_RS11975;Dbxref=GenBank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=CCO57_RS11975;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 207700 208875 . + . ID=gene-CCO57_RS11980;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CCO57_RS11980;old_locus_tag=CCO57_11965 NZ_NPMC01000006.1 Protein Homology CDS 207700 208875 . + 0 ID=cds-WP_094888522.1;Parent=gene-CCO57_RS11980;Dbxref=GenBank:WP_094888522.1;Name=WP_094888522.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=CCO57_RS11980;product=mannose-6-phosphate isomerase;protein_id=WP_094888522.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 208978 210486 . + . ID=gene-CCO57_RS11985;Name=CCO57_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11985;old_locus_tag=CCO57_11970 NZ_NPMC01000006.1 Protein Homology CDS 208978 210486 . + 0 ID=cds-WP_000753340.1;Parent=gene-CCO57_RS11985;Dbxref=GenBank:WP_000753340.1;Name=WP_000753340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=CCO57_RS11985;product=YdgA family protein;protein_id=WP_000753340.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 210544 211572 . - . ID=gene-CCO57_RS11990;Name=CCO57_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS11990;old_locus_tag=CCO57_11975 NZ_NPMC01000006.1 Protein Homology CDS 210544 211572 . - 0 ID=cds-WP_000951918.1;Parent=gene-CCO57_RS11990;Dbxref=GenBank:WP_000951918.1;Name=WP_000951918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=CCO57_RS11990;product=Mal regulon transcriptional regulator MalI;protein_id=WP_000951918.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 211745 213337 . + . ID=gene-CCO57_RS11995;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=CCO57_RS11995;old_locus_tag=CCO57_11980 NZ_NPMC01000006.1 Protein Homology CDS 211745 213337 . + 0 ID=cds-WP_094914955.1;Parent=gene-CCO57_RS11995;Dbxref=GenBank:WP_094914955.1;Name=WP_094914955.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=malX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=CCO57_RS11995;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_094914955.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 213347 214519 . + . ID=gene-CCO57_RS12000;Name=CCO57_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12000;old_locus_tag=CCO57_11985 NZ_NPMC01000006.1 Protein Homology CDS 213347 214519 . + 0 ID=cds-WP_094888523.1;Parent=gene-CCO57_RS12000;Dbxref=GenBank:WP_094888523.1;Name=WP_094888523.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=CCO57_RS12000;product=MalY/PatB family protein;protein_id=WP_094888523.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 214735 215736 . + . ID=gene-CCO57_RS12005;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CCO57_RS12005;old_locus_tag=CCO57_11990 NZ_NPMC01000006.1 Protein Homology CDS 214735 215736 . + 0 ID=cds-WP_094888524.1;Parent=gene-CCO57_RS12005;Dbxref=GenBank:WP_094888524.1;Name=WP_094888524.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=CCO57_RS12005;product=adenosine deaminase;protein_id=WP_094888524.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 215811 216851 . - . ID=gene-CCO57_RS12010;Name=CCO57_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12010;old_locus_tag=CCO57_11995 NZ_NPMC01000006.1 Protein Homology CDS 215811 216851 . - 0 ID=cds-WP_000998241.1;Parent=gene-CCO57_RS12010;Dbxref=GenBank:WP_000998241.1;Name=WP_000998241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=CCO57_RS12010;product=oxidoreductase;protein_id=WP_000998241.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 217059 217184 . + . ID=gene-CCO57_RS12015;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=CCO57_RS12015;old_locus_tag=CCO57_12000 NZ_NPMC01000006.1 Protein Homology CDS 217059 217184 . + 0 ID=cds-WP_001708800.1;Parent=gene-CCO57_RS12015;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=CCO57_RS12015;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 217481 217696 . + . ID=gene-CCO57_RS12020;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=CCO57_RS12020;old_locus_tag=CCO57_12005 NZ_NPMC01000006.1 Protein Homology CDS 217481 217696 . + 0 ID=cds-WP_000217946.1;Parent=gene-CCO57_RS12020;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=CCO57_RS12020;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 217785 218225 . + . ID=gene-CCO57_RS12025;Name=CCO57_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12025;old_locus_tag=CCO57_12010 NZ_NPMC01000006.1 Protein Homology CDS 217785 218225 . + 0 ID=cds-WP_000214061.1;Parent=gene-CCO57_RS12025;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=CCO57_RS12025;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 218302 218883 . + . ID=gene-CCO57_RS12030;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=CCO57_RS12030;old_locus_tag=CCO57_12015 NZ_NPMC01000006.1 Protein Homology CDS 218302 218883 . + 0 ID=cds-WP_000133179.1;Parent=gene-CCO57_RS12030;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=CCO57_RS12030;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 218883 219461 . + . ID=gene-CCO57_RS12035;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=CCO57_RS12035;old_locus_tag=CCO57_12020 NZ_NPMC01000006.1 Protein Homology CDS 218883 219461 . + 0 ID=cds-WP_001092600.1;Parent=gene-CCO57_RS12035;Dbxref=GenBank:WP_001092600.1;Name=WP_001092600.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=CCO57_RS12035;product=electron transport complex subunit RsxB;protein_id=WP_001092600.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 219454 221568 . + . ID=gene-CCO57_RS12040;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=CCO57_RS12040;old_locus_tag=CCO57_12025 NZ_NPMC01000006.1 Protein Homology CDS 219454 221568 . + 0 ID=cds-WP_094914956.1;Parent=gene-CCO57_RS12040;Dbxref=GenBank:WP_094914956.1;Name=WP_094914956.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=CCO57_RS12040;product=electron transport complex subunit RsxC;protein_id=WP_094914956.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 221569 222627 . + . ID=gene-CCO57_RS12045;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=CCO57_RS12045;old_locus_tag=CCO57_12030 NZ_NPMC01000006.1 Protein Homology CDS 221569 222627 . + 0 ID=cds-WP_000231890.1;Parent=gene-CCO57_RS12045;Dbxref=GenBank:WP_000231890.1;Name=WP_000231890.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=CCO57_RS12045;product=electron transport complex subunit RsxD;protein_id=WP_000231890.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 222631 223251 . + . ID=gene-CCO57_RS12050;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=CCO57_RS12050;old_locus_tag=CCO57_12035 NZ_NPMC01000006.1 Protein Homology CDS 222631 223251 . + 0 ID=cds-WP_000920817.1;Parent=gene-CCO57_RS12050;Dbxref=GenBank:WP_000920817.1;Name=WP_000920817.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=CCO57_RS12050;product=electron transport complex subunit RsxG;protein_id=WP_000920817.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 223254 223946 . + . ID=gene-CCO57_RS12055;Name=CCO57_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12055;old_locus_tag=CCO57_12040 NZ_NPMC01000006.1 Protein Homology CDS 223254 223946 . + 0 ID=cds-WP_094914957.1;Parent=gene-CCO57_RS12055;Dbxref=GenBank:WP_094914957.1;Name=WP_094914957.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=CCO57_RS12055;product=electron transport complex subunit E;protein_id=WP_094914957.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 223946 224581 . + . ID=gene-CCO57_RS12060;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CCO57_RS12060;old_locus_tag=CCO57_12045 NZ_NPMC01000006.1 Protein Homology CDS 223946 224581 . + 0 ID=cds-WP_001030318.1;Parent=gene-CCO57_RS12060;Dbxref=GenBank:WP_001030318.1;Name=WP_001030318.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=CCO57_RS12060;product=endonuclease III;protein_id=WP_001030318.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 225183 226688 . + . ID=gene-CCO57_RS12065;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=CCO57_RS12065;old_locus_tag=CCO57_12050 NZ_NPMC01000006.1 Protein Homology CDS 225183 226688 . + 0 ID=cds-WP_000100911.1;Parent=gene-CCO57_RS12065;Dbxref=GenBank:WP_000100911.1;Name=WP_000100911.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=CCO57_RS12065;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100911.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 226793 227398 . + . ID=gene-CCO57_RS12070;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=CCO57_RS12070;old_locus_tag=CCO57_12055 NZ_NPMC01000006.1 Protein Homology CDS 226793 227398 . + 0 ID=cds-WP_000765723.1;Parent=gene-CCO57_RS12070;Dbxref=GenBank:WP_000765723.1;Name=WP_000765723.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=CCO57_RS12070;product=glutathione transferase GstA;protein_id=WP_000765723.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 227457 228317 . - . ID=gene-CCO57_RS12075;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=CCO57_RS12075;old_locus_tag=CCO57_12060 NZ_NPMC01000006.1 Protein Homology CDS 227457 228317 . - 0 ID=cds-WP_000789736.1;Parent=gene-CCO57_RS12075;Dbxref=GenBank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=CCO57_RS12075;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 228377 229651 . - . ID=gene-CCO57_RS12080;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CCO57_RS12080;old_locus_tag=CCO57_12065 NZ_NPMC01000006.1 Protein Homology CDS 228377 229651 . - 0 ID=cds-WP_094914958.1;Parent=gene-CCO57_RS12080;Dbxref=GenBank:WP_094914958.1;Name=WP_094914958.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=CCO57_RS12080;product=tyrosine--tRNA ligase;protein_id=WP_094914958.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 229778 230434 . - . ID=gene-CCO57_RS12085;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=CCO57_RS12085;old_locus_tag=CCO57_12070 NZ_NPMC01000006.1 Protein Homology CDS 229778 230434 . - 0 ID=cds-WP_001282334.1;Parent=gene-CCO57_RS12085;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=CCO57_RS12085;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 230493 230822 . - . ID=gene-CCO57_RS12090;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=CCO57_RS12090;old_locus_tag=CCO57_12075 NZ_NPMC01000006.1 Protein Homology CDS 230493 230822 . - 0 ID=cds-WP_001132086.1;Parent=gene-CCO57_RS12090;Dbxref=GenBank:WP_001132086.1;Name=WP_001132086.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=CCO57_RS12090;product=C-type lysozyme inhibitor;protein_id=WP_001132086.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 230910 232031 . - . ID=gene-CCO57_RS12095;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=CCO57_RS12095;old_locus_tag=CCO57_12080 NZ_NPMC01000006.1 Protein Homology CDS 230910 232031 . - 0 ID=cds-WP_094914959.1;Parent=gene-CCO57_RS12095;Dbxref=GenBank:WP_094914959.1;Name=WP_094914959.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=CCO57_RS12095;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_094914959.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 232304 232771 . + . ID=gene-CCO57_RS12100;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=CCO57_RS12100;old_locus_tag=CCO57_12085 NZ_NPMC01000006.1 Protein Homology CDS 232304 232771 . + 0 ID=cds-WP_000597179.1;Parent=gene-CCO57_RS12100;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=CCO57_RS12100;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 232819 233259 . - . ID=gene-CCO57_RS12105;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=CCO57_RS12105;old_locus_tag=CCO57_12090 NZ_NPMC01000006.1 Protein Homology CDS 232819 233259 . - 0 ID=cds-WP_000764550.1;Parent=gene-CCO57_RS12105;Dbxref=GenBank:WP_000764550.1;Name=WP_000764550.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=CCO57_RS12105;product=transcriptional regulator SlyA;protein_id=WP_000764550.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 233454 233690 . + . ID=gene-CCO57_RS12110;Name=CCO57_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12110;old_locus_tag=CCO57_12095 NZ_NPMC01000006.1 Protein Homology CDS 233454 233690 . + 0 ID=cds-WP_094914960.1;Parent=gene-CCO57_RS12110;Dbxref=GenBank:WP_094914960.1;Name=WP_094914960.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=CCO57_RS12110;product=DUF1656 domain-containing protein;protein_id=WP_094914960.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 233693 234553 . + . ID=gene-CCO57_RS12115;Name=CCO57_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12115;old_locus_tag=CCO57_12100 NZ_NPMC01000006.1 Protein Homology CDS 233693 234553 . + 0 ID=cds-WP_001527784.1;Parent=gene-CCO57_RS12115;Dbxref=GenBank:WP_001527784.1;Name=WP_001527784.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=CCO57_RS12115;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001527784.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 234553 236592 . + . ID=gene-CCO57_RS12120;Name=CCO57_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12120;old_locus_tag=CCO57_12105 NZ_NPMC01000006.1 Protein Homology CDS 234553 236592 . + 0 ID=cds-WP_000777614.1;Parent=gene-CCO57_RS12120;Dbxref=GenBank:WP_000777614.1;Name=WP_000777614.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=CCO57_RS12120;product=FUSC family protein;protein_id=WP_000777614.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 236568 237089 . - . ID=gene-CCO57_RS12125;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=CCO57_RS12125;old_locus_tag=CCO57_12110 NZ_NPMC01000006.1 Protein Homology CDS 236568 237089 . - 0 ID=cds-WP_000826816.1;Parent=gene-CCO57_RS12125;Dbxref=GenBank:WP_000826816.1;Name=WP_000826816.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=CCO57_RS12125;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826816.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 237169 238065 . - . ID=gene-CCO57_RS12130;Name=CCO57_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12130;old_locus_tag=CCO57_12115 NZ_NPMC01000006.1 Protein Homology CDS 237169 238065 . - 0 ID=cds-WP_020898737.1;Parent=gene-CCO57_RS12130;Dbxref=GenBank:WP_020898737.1;Name=WP_020898737.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=CCO57_RS12130;product=aldo/keto reductase;protein_id=WP_020898737.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 238116 238355 . - . ID=gene-CCO57_RS12135;Name=CCO57_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12135;old_locus_tag=CCO57_12120 NZ_NPMC01000006.1 Protein Homology CDS 238116 238355 . - 0 ID=cds-WP_001538148.1;Parent=gene-CCO57_RS12135;Dbxref=GenBank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=CCO57_RS12135;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 238458 239057 . + . ID=gene-CCO57_RS12140;Name=CCO57_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12140;old_locus_tag=CCO57_12125 NZ_NPMC01000006.1 Protein Homology CDS 238458 239057 . + 0 ID=cds-WP_001041823.1;Parent=gene-CCO57_RS12140;Dbxref=GenBank:WP_001041823.1;Name=WP_001041823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=CCO57_RS12140;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 239116 240213 . + . ID=gene-CCO57_RS12145;Name=CCO57_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12145;old_locus_tag=CCO57_12130 NZ_NPMC01000006.1 Protein Homology CDS 239116 240213 . + 0 ID=cds-WP_020438078.1;Parent=gene-CCO57_RS12145;Dbxref=GenBank:WP_020438078.1;Name=WP_020438078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=CCO57_RS12145;product=alkene reductase;protein_id=WP_020438078.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 240282 240689 . + . ID=gene-CCO57_RS12150;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=CCO57_RS12150;old_locus_tag=CCO57_12135 NZ_NPMC01000006.1 Protein Homology CDS 240282 240689 . + 0 ID=cds-WP_001237787.1;Parent=gene-CCO57_RS12150;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=CCO57_RS12150;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 240790 241437 . + . ID=gene-CCO57_RS12155;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=CCO57_RS12155;old_locus_tag=CCO57_12140 NZ_NPMC01000006.1 Protein Homology CDS 240790 241437 . + 0 ID=cds-WP_001282267.1;Parent=gene-CCO57_RS12155;Dbxref=GenBank:WP_001282267.1;Name=WP_001282267.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=CCO57_RS12155;product=ribonuclease T;protein_id=WP_001282267.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 241533 241880 . - . ID=gene-CCO57_RS12160;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=CCO57_RS12160;old_locus_tag=CCO57_12145 NZ_NPMC01000006.1 Protein Homology CDS 241533 241880 . - 0 ID=cds-WP_000108176.1;Parent=gene-CCO57_RS12160;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=CCO57_RS12160;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 242215 243036 . + . ID=gene-CCO57_RS12165;Name=CCO57_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12165;old_locus_tag=CCO57_12150 NZ_NPMC01000006.1 Protein Homology CDS 242215 243036 . + 0 ID=cds-WP_001520344.1;Parent=gene-CCO57_RS12165;Dbxref=GenBank:WP_001520344.1;Name=WP_001520344.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=CCO57_RS12165;product=C40 family peptidase;protein_id=WP_001520344.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 243163 243744 . + . ID=gene-CCO57_RS12170;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=CCO57_RS12170;old_locus_tag=CCO57_12155 NZ_NPMC01000006.1 Protein Homology CDS 243163 243744 . + 0 ID=cds-WP_000007294.1;Parent=gene-CCO57_RS12170;Dbxref=GenBank:WP_000007294.1;Name=WP_000007294.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=CCO57_RS12170;product=superoxide dismutase [Fe];protein_id=WP_000007294.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 243827 243916 . - . ID=gene-CCO57_RS12175;Name=CCO57_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12175;old_locus_tag=CCO57_12160 NZ_NPMC01000006.1 Protein Homology CDS 243827 243916 . - 0 ID=cds-WP_000102277.1;Parent=gene-CCO57_RS12175;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=CCO57_RS12175;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 244212 245237 . + . ID=gene-CCO57_RS12185;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CCO57_RS12185;old_locus_tag=CCO57_12170 NZ_NPMC01000006.1 Protein Homology CDS 244212 245237 . + 0 ID=cds-WP_000190993.1;Parent=gene-CCO57_RS12185;Dbxref=GenBank:WP_000190993.1;Name=WP_000190993.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=CCO57_RS12185;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190993.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 245234 246166 . - . ID=gene-CCO57_RS12190;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=CCO57_RS12190;old_locus_tag=CCO57_12175 NZ_NPMC01000006.1 Protein Homology CDS 245234 246166 . - 0 ID=cds-WP_000269512.1;Parent=gene-CCO57_RS12190;Dbxref=GenBank:WP_000269512.1;Name=WP_000269512.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=CCO57_RS12190;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269512.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 246279 247484 . + . ID=gene-CCO57_RS12195;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=CCO57_RS12195;old_locus_tag=CCO57_12180 NZ_NPMC01000006.1 Protein Homology CDS 246279 247484 . + 0 ID=cds-WP_023213418.1;Parent=gene-CCO57_RS12195;Dbxref=GenBank:WP_023213418.1;Name=WP_023213418.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=CCO57_RS12195;product=purine nucleoside transporter PunC;protein_id=WP_023213418.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 247774 248922 . + . ID=gene-CCO57_RS12200;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=CCO57_RS12200;old_locus_tag=CCO57_12185 NZ_NPMC01000006.1 Protein Homology CDS 247774 248922 . + 0 ID=cds-WP_000098879.1;Parent=gene-CCO57_RS12200;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=CCO57_RS12200;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 248964 249605 . - . ID=gene-CCO57_RS12205;Name=CCO57_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12205;old_locus_tag=CCO57_12190 NZ_NPMC01000006.1 Protein Homology CDS 248964 249605 . - 0 ID=cds-WP_000493972.1;Parent=gene-CCO57_RS12205;Dbxref=GenBank:WP_000493972.1;Name=WP_000493972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=CCO57_RS12205;product=riboflavin synthase;protein_id=WP_000493972.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 249822 251195 . + . ID=gene-CCO57_RS12210;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=CCO57_RS12210;old_locus_tag=CCO57_12195 NZ_NPMC01000006.1 Protein Homology CDS 249822 251195 . + 0 ID=cds-WP_001175081.1;Parent=gene-CCO57_RS12210;Dbxref=GenBank:WP_001175081.1;Name=WP_001175081.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=CCO57_RS12210;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175081.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 251347 251423 . + . ID=gene-CCO57_RS12215;Name=CCO57_RS12215;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS12215;old_locus_tag=CCO57_12200 NZ_NPMC01000006.1 tRNAscan-SE tRNA 251347 251423 . + . ID=rna-CCO57_RS12215;Parent=gene-CCO57_RS12215;anticodon=(pos:251381..251383);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS12215;product=tRNA-Val NZ_NPMC01000006.1 tRNAscan-SE exon 251347 251423 . + . ID=exon-CCO57_RS12215-1;Parent=rna-CCO57_RS12215;anticodon=(pos:251381..251383);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS12215;product=tRNA-Val NZ_NPMC01000006.1 RefSeq gene 251434 251510 . + . ID=gene-CCO57_RS12220;Name=CCO57_RS12220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS12220;old_locus_tag=CCO57_12205 NZ_NPMC01000006.1 tRNAscan-SE tRNA 251434 251510 . + . ID=rna-CCO57_RS12220;Parent=gene-CCO57_RS12220;anticodon=(pos:251468..251470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS12220;product=tRNA-Val NZ_NPMC01000006.1 tRNAscan-SE exon 251434 251510 . + . ID=exon-CCO57_RS12220-1;Parent=rna-CCO57_RS12220;anticodon=(pos:251468..251470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS12220;product=tRNA-Val NZ_NPMC01000006.1 RefSeq gene 251679 252737 . - . ID=gene-CCO57_RS12225;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=CCO57_RS12225;old_locus_tag=CCO57_12210 NZ_NPMC01000006.1 Protein Homology CDS 251679 252737 . - 0 ID=cds-WP_094914961.1;Parent=gene-CCO57_RS12225;Dbxref=GenBank:WP_094914961.1;Name=WP_094914961.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=CCO57_RS12225;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_094914961.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 252734 253513 . - . ID=gene-CCO57_RS12230;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=CCO57_RS12230;old_locus_tag=CCO57_12215 NZ_NPMC01000006.1 Protein Homology CDS 252734 253513 . - 0 ID=cds-WP_000068771.1;Parent=gene-CCO57_RS12230;Dbxref=GenBank:WP_000068771.1;Name=WP_000068771.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=CCO57_RS12230;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068771.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 253514 253780 . - . ID=gene-CCO57_RS12235;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=CCO57_RS12235;old_locus_tag=CCO57_12220 NZ_NPMC01000006.1 Protein Homology CDS 253514 253780 . - 0 ID=cds-WP_000999982.1;Parent=gene-CCO57_RS12235;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=CCO57_RS12235;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 253777 254424 . - . ID=gene-CCO57_RS12240;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=CCO57_RS12240;old_locus_tag=CCO57_12225 NZ_NPMC01000006.1 Protein Homology CDS 253777 254424 . - 0 ID=cds-WP_000056367.1;Parent=gene-CCO57_RS12240;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=CCO57_RS12240;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 254492 255460 . - . ID=gene-CCO57_RS12245;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=CCO57_RS12245;old_locus_tag=CCO57_12230 NZ_NPMC01000006.1 Protein Homology CDS 254492 255460 . - 0 ID=cds-WP_000944198.1;Parent=gene-CCO57_RS12245;Dbxref=GenBank:WP_000944198.1;Name=WP_000944198.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=CCO57_RS12245;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_000944198.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 255441 255815 . - . ID=gene-CCO57_RS12250;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=CCO57_RS12250;old_locus_tag=CCO57_12235 NZ_NPMC01000006.1 Protein Homology CDS 255441 255815 . - 0 ID=cds-WP_001223305.1;Parent=gene-CCO57_RS12250;Dbxref=GenBank:WP_001223305.1;Name=WP_001223305.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=CCO57_RS12250;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223305.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 255796 256173 . - . ID=gene-CCO57_RS12255;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=CCO57_RS12255;old_locus_tag=CCO57_12240 NZ_NPMC01000006.1 Protein Homology CDS 255796 256173 . - 0 ID=cds-WP_000449092.1;Parent=gene-CCO57_RS12255;Dbxref=GenBank:WP_000449092.1;Name=WP_000449092.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=CCO57_RS12255;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449092.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 256176 257483 . - . ID=gene-CCO57_RS12260;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=CCO57_RS12260;old_locus_tag=CCO57_12245 NZ_NPMC01000006.1 Protein Homology CDS 256176 257483 . - 0 ID=cds-WP_000787225.1;Parent=gene-CCO57_RS12260;Dbxref=GenBank:WP_000787225.1;Name=WP_000787225.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=CCO57_RS12260;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_000787225.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 257473 259518 . - . ID=gene-CCO57_RS12265;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=CCO57_RS12265;old_locus_tag=CCO57_12250 NZ_NPMC01000006.1 Protein Homology CDS 257473 259518 . - 0 ID=cds-WP_001258221.1;Parent=gene-CCO57_RS12265;Dbxref=GenBank:WP_001258221.1;Name=WP_001258221.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=CCO57_RS12265;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258221.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 259503 259871 . - . ID=gene-CCO57_RS12270;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=CCO57_RS12270;old_locus_tag=CCO57_12255 NZ_NPMC01000006.1 Protein Homology CDS 259503 259871 . - 0 ID=cds-WP_000383697.1;Parent=gene-CCO57_RS12270;Dbxref=GenBank:WP_000383697.1;Name=WP_000383697.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=CCO57_RS12270;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383697.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 259929 260945 . - . ID=gene-CCO57_RS12275;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=CCO57_RS12275;old_locus_tag=CCO57_12260 NZ_NPMC01000006.1 Protein Homology CDS 259929 260945 . - 0 ID=cds-WP_000238886.1;Parent=gene-CCO57_RS12275;Dbxref=GenBank:WP_000238886.1;Name=WP_000238886.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=CCO57_RS12275;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_000238886.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 260911 261585 . - . ID=gene-CCO57_RS12280;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=CCO57_RS12280;old_locus_tag=CCO57_12265 NZ_NPMC01000006.1 Protein Homology CDS 260911 261585 . - 0 ID=cds-WP_094914962.1;Parent=gene-CCO57_RS12280;Dbxref=GenBank:WP_094914962.1;Name=WP_094914962.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=CCO57_RS12280;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_094914962.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 261582 262130 . - . ID=gene-CCO57_RS12285;Name=CCO57_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12285;old_locus_tag=CCO57_12270 NZ_NPMC01000006.1 Protein Homology CDS 261582 262130 . - 0 ID=cds-WP_001531605.1;Parent=gene-CCO57_RS12285;Dbxref=GenBank:WP_001531605.1;Name=WP_001531605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=CCO57_RS12285;product=type III secretion system domain-containing protein;protein_id=WP_001531605.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 262148 262897 . - . ID=gene-CCO57_RS12290;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=CCO57_RS12290;old_locus_tag=CCO57_12275 NZ_NPMC01000006.1 Protein Homology CDS 262148 262897 . - 0 ID=cds-WP_000868146.1;Parent=gene-CCO57_RS12290;Dbxref=GenBank:WP_000868146.1;Name=WP_000868146.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=CCO57_RS12290;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_000868146.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 262894 263142 . - . ID=gene-CCO57_RS12295;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=CCO57_RS12295;old_locus_tag=CCO57_12280 NZ_NPMC01000006.1 Protein Homology CDS 262894 263142 . - 0 ID=cds-WP_023194623.1;Parent=gene-CCO57_RS12295;Dbxref=GenBank:WP_023194623.1;Name=WP_023194623.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=CCO57_RS12295;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_023194623.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 263154 263444 . - . ID=gene-CCO57_RS12300;Name=CCO57_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12300;old_locus_tag=CCO57_12285 NZ_NPMC01000006.1 Protein Homology CDS 263154 263444 . - 0 ID=cds-WP_000444713.1;Parent=gene-CCO57_RS12300;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=CCO57_RS12300;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 263422 263637 . - . ID=gene-CCO57_RS12305;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=CCO57_RS12305;old_locus_tag=CCO57_12290 NZ_NPMC01000006.1 Protein Homology CDS 263422 263637 . - 0 ID=cds-WP_000350226.1;Parent=gene-CCO57_RS12305;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=CCO57_RS12305;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 263731 264420 . - . ID=gene-CCO57_RS12310;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=CCO57_RS12310;old_locus_tag=CCO57_12295 NZ_NPMC01000006.1 Protein Homology CDS 263731 264420 . - 0 ID=cds-WP_023232832.1;Parent=gene-CCO57_RS12310;Dbxref=GenBank:WP_023232832.1;Name=WP_023232832.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=CCO57_RS12310;product=pathogenicity island 2 effector protein SseG;protein_id=WP_023232832.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 264417 265199 . - . ID=gene-CCO57_RS12315;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=CCO57_RS12315;old_locus_tag=CCO57_12300 NZ_NPMC01000006.1 Protein Homology CDS 264417 265199 . - 0 ID=cds-WP_023232833.1;Parent=gene-CCO57_RS12315;Dbxref=GenBank:WP_023232833.1;Name=WP_023232833.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=CCO57_RS12315;product=type III secretion systems effector SseF;protein_id=WP_023232833.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 265215 265649 . - . ID=gene-CCO57_RS12320;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=CCO57_RS12320;old_locus_tag=CCO57_12305 NZ_NPMC01000006.1 Protein Homology CDS 265215 265649 . - 0 ID=cds-WP_000979963.1;Parent=gene-CCO57_RS12320;Dbxref=GenBank:WP_000979963.1;Name=WP_000979963.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=CCO57_RS12320;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979963.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 265701 266117 . - . ID=gene-CCO57_RS12325;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=CCO57_RS12325;old_locus_tag=CCO57_12310 NZ_NPMC01000006.1 Protein Homology CDS 265701 266117 . - 0 ID=cds-WP_000249602.1;Parent=gene-CCO57_RS12325;Dbxref=GenBank:WP_000249602.1;Name=WP_000249602.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=CCO57_RS12325;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249602.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 266120 266707 . - . ID=gene-CCO57_RS12330;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=CCO57_RS12330;old_locus_tag=CCO57_12315 NZ_NPMC01000006.1 Protein Homology CDS 266120 266707 . - 0 ID=cds-WP_000388320.1;Parent=gene-CCO57_RS12330;Dbxref=GenBank:WP_000388320.1;Name=WP_000388320.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=CCO57_RS12330;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_000388320.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 266723 268177 . - . ID=gene-CCO57_RS12335;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=CCO57_RS12335;old_locus_tag=CCO57_12320 NZ_NPMC01000006.1 Protein Homology CDS 266723 268177 . - 0 ID=cds-WP_001527831.1;Parent=gene-CCO57_RS12335;Dbxref=GenBank:WP_001527831.1;Name=WP_001527831.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=CCO57_RS12335;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WP_001527831.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 268180 268653 . - . ID=gene-CCO57_RS12340;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=CCO57_RS12340;old_locus_tag=CCO57_12325 NZ_NPMC01000006.1 Protein Homology CDS 268180 268653 . - 0 ID=cds-WP_000711021.1;Parent=gene-CCO57_RS12340;Dbxref=GenBank:WP_000711021.1;Name=WP_000711021.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=CCO57_RS12340;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_000711021.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 268650 269240 . - . ID=gene-CCO57_RS12345;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO57_RS12345;old_locus_tag=CCO57_12330 NZ_NPMC01000006.1 Protein Homology CDS 268650 269240 . - 0 ID=cds-WP_023232834.1;Parent=gene-CCO57_RS12345;Dbxref=GenBank:WP_023232834.1;Name=WP_023232834.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=CCO57_RS12345;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_023232834.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 269247 269573 . - . ID=gene-CCO57_RS12350;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO57_RS12350;old_locus_tag=CCO57_12335 NZ_NPMC01000006.1 Protein Homology CDS 269247 269573 . - 0 ID=cds-WP_094914963.1;Parent=gene-CCO57_RS12350;Dbxref=GenBank:WP_094914963.1;Name=WP_094914963.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=CCO57_RS12350;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_094914963.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 269776 270018 . - . ID=gene-CCO57_RS12360;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=CCO57_RS12360;old_locus_tag=CCO57_12345 NZ_NPMC01000006.1 Protein Homology CDS 269776 270018 . - 0 ID=cds-WP_000210202.1;Parent=gene-CCO57_RS12360;Dbxref=GenBank:WP_000210202.1;Name=WP_000210202.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=CCO57_RS12360;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_000210202.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 270026 271237 . - . ID=gene-CCO57_RS12365;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=CCO57_RS12365;old_locus_tag=CCO57_12350 NZ_NPMC01000006.1 Protein Homology CDS 270026 271237 . - 0 ID=cds-WP_000323795.1;Parent=gene-CCO57_RS12365;Dbxref=GenBank:WP_000323795.1;Name=WP_000323795.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=CCO57_RS12365;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_000323795.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 271218 272711 . - . ID=gene-CCO57_RS12370;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=CCO57_RS12370;old_locus_tag=CCO57_12355 NZ_NPMC01000006.1 Protein Homology CDS 271218 272711 . - 0 ID=cds-WP_000261286.1;Parent=gene-CCO57_RS12370;Dbxref=GenBank:WP_000261286.1;Name=WP_000261286.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=CCO57_RS12370;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261286.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 272713 273114 . - . ID=gene-CCO57_RS12375;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=CCO57_RS12375;old_locus_tag=CCO57_12360 NZ_NPMC01000006.1 Protein Homology CDS 272713 273114 . - 0 ID=cds-WP_001562740.1;Parent=gene-CCO57_RS12375;Dbxref=GenBank:WP_001562740.1;Name=WP_001562740.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=CCO57_RS12375;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001562740.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 273515 276277 . + . ID=gene-CCO57_RS12380;Name=CCO57_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12380;old_locus_tag=CCO57_12365 NZ_NPMC01000006.1 Protein Homology CDS 273515 276277 . + 0 ID=cds-WP_001050758.1;Parent=gene-CCO57_RS12380;Dbxref=GenBank:WP_001050758.1;Name=WP_001050758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=CCO57_RS12380;product=two component system sensor kinase;protein_id=WP_001050758.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 276308 276946 . + . ID=gene-CCO57_RS12385;Name=CCO57_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12385;old_locus_tag=CCO57_12370 NZ_NPMC01000006.1 Protein Homology CDS 276308 276946 . + 0 ID=cds-WP_000666335.1;Parent=gene-CCO57_RS12385;Dbxref=GenBank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=CCO57_RS12385;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 277125 277853 . + . ID=gene-CCO57_RS12390;Name=CCO57_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12390;old_locus_tag=CCO57_12375 NZ_NPMC01000006.1 Protein Homology CDS 277125 277853 . + 0 ID=cds-WP_000122316.1;Parent=gene-CCO57_RS12390;Dbxref=GenBank:WP_000122316.1;Name=WP_000122316.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=CCO57_RS12390;product=MerR family transcriptional regulator;protein_id=WP_000122316.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 278025 278984 . + . ID=gene-CCO57_RS12395;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=CCO57_RS12395;old_locus_tag=CCO57_12380 NZ_NPMC01000006.1 Protein Homology CDS 278025 278984 . + 0 ID=cds-WP_001060726.1;Parent=gene-CCO57_RS12395;Dbxref=GenBank:WP_001060726.1;Name=WP_001060726.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=CCO57_RS12395;product=transcriptional regulator MlrB;protein_id=WP_001060726.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 279080 279292 . - . ID=gene-CCO57_RS12400;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=CCO57_RS12400;old_locus_tag=CCO57_12385 NZ_NPMC01000006.1 Protein Homology CDS 279080 279292 . - 0 ID=cds-WP_000165779.1;Parent=gene-CCO57_RS12400;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=CCO57_RS12400;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 279390 280010 . - . ID=gene-CCO57_RS12405;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=CCO57_RS12405;old_locus_tag=CCO57_12390 NZ_NPMC01000006.1 Protein Homology CDS 279390 280010 . - 0 ID=cds-WP_000190932.1;Parent=gene-CCO57_RS12405;Dbxref=GenBank:WP_000190932.1;Name=WP_000190932.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=CCO57_RS12405;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190932.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 279985 281763 . - . ID=gene-CCO57_RS12410;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=CCO57_RS12410;old_locus_tag=CCO57_12395 NZ_NPMC01000006.1 Protein Homology CDS 279985 281763 . - 0 ID=cds-WP_077917712.1;Parent=gene-CCO57_RS12410;Dbxref=GenBank:WP_077917712.1;Name=WP_077917712.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=CCO57_RS12410;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_077917712.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 281945 282679 . + . ID=gene-CCO57_RS12415;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=CCO57_RS12415;old_locus_tag=CCO57_12400 NZ_NPMC01000006.1 Protein Homology CDS 281945 282679 . + 0 ID=cds-WP_001523928.1;Parent=gene-CCO57_RS12415;Dbxref=GenBank:WP_001523928.1;Name=WP_001523928.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=CCO57_RS12415;product=tetrathionate reductase subunit TtrB;protein_id=WP_001523928.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 282680 283702 . + . ID=gene-CCO57_RS12420;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=CCO57_RS12420;old_locus_tag=CCO57_12405 NZ_NPMC01000006.1 Protein Homology CDS 282680 283702 . + 0 ID=cds-WP_023232836.1;Parent=gene-CCO57_RS12420;Dbxref=GenBank:WP_023232836.1;Name=WP_023232836.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=CCO57_RS12420;product=tetrathionate reductase subunit TtrC;protein_id=WP_023232836.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 283695 286757 . + . ID=gene-CCO57_RS12425;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=CCO57_RS12425;old_locus_tag=CCO57_12410 NZ_NPMC01000006.1 Protein Homology CDS 283695 286757 . + 0 ID=cds-WP_023207840.1;Parent=gene-CCO57_RS12425;Dbxref=GenBank:WP_023207840.1;Name=WP_023207840.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=CCO57_RS12425;product=tetrathionate reductase subunit TtrA;protein_id=WP_023207840.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 287080 288306 . + . ID=gene-CCO57_RS12430;Name=CCO57_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12430;old_locus_tag=CCO57_12415 NZ_NPMC01000006.1 Protein Homology CDS 287080 288306 . + 0 ID=cds-WP_023229600.1;Parent=gene-CCO57_RS12430;Dbxref=GenBank:WP_023229600.1;Name=WP_023229600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=CCO57_RS12430;product=PfkB family carbohydrate kinase;protein_id=WP_023229600.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 288318 289055 . + . ID=gene-CCO57_RS12435;Name=CCO57_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12435;old_locus_tag=CCO57_12420 NZ_NPMC01000006.1 Protein Homology CDS 288318 289055 . + 0 ID=cds-WP_000697187.1;Parent=gene-CCO57_RS12435;Dbxref=GenBank:WP_000697187.1;Name=WP_000697187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=CCO57_RS12435;product=glutamine amidotransferase;protein_id=WP_000697187.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 289114 290007 . + . ID=gene-CCO57_RS12440;Name=CCO57_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12440;old_locus_tag=CCO57_12425 NZ_NPMC01000006.1 Protein Homology CDS 289114 290007 . + 0 ID=cds-WP_094914964.1;Parent=gene-CCO57_RS12440;Dbxref=GenBank:WP_094914964.1;Name=WP_094914964.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=CCO57_RS12440;product=proline iminopeptidase-family hydrolase;protein_id=WP_094914964.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 290029 291372 . + . ID=gene-CCO57_RS12445;Name=CCO57_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12445;old_locus_tag=CCO57_12430 NZ_NPMC01000006.1 Protein Homology CDS 290029 291372 . + 0 ID=cds-WP_023232838.1;Parent=gene-CCO57_RS12445;Dbxref=GenBank:WP_023232838.1;Name=WP_023232838.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=CCO57_RS12445;product=APC family permease;protein_id=WP_023232838.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 291536 291766 . + . ID=gene-CCO57_RS24965;Name=CCO57_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24965 NZ_NPMC01000006.1 Protein Homology CDS 291536 291766 . + 0 ID=cds-WP_418143684.1;Parent=gene-CCO57_RS24965;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=CCO57_RS24965;product=hypothetical protein;protein_id=WP_418143684.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 291774 293186 . + . ID=gene-CCO57_RS12455;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=CCO57_RS12455;old_locus_tag=CCO57_12440 NZ_NPMC01000006.1 Protein Homology CDS 291774 293186 . + 0 ID=cds-WP_000751447.1;Parent=gene-CCO57_RS12455;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=CCO57_RS12455;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 293497 293733 . + . ID=gene-CCO57_RS12460;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=CCO57_RS12460;old_locus_tag=CCO57_12445 NZ_NPMC01000006.1 Protein Homology CDS 293497 293733 . + 0 ID=cds-WP_001082307.1;Parent=gene-CCO57_RS12460;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=CCO57_RS12460;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 293801 294802 . - . ID=gene-CCO57_RS12465;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=CCO57_RS12465;old_locus_tag=CCO57_12450 NZ_NPMC01000006.1 Protein Homology CDS 293801 294802 . - 0 ID=cds-WP_000817051.1;Parent=gene-CCO57_RS12465;Dbxref=GenBank:WP_000817051.1;Name=WP_000817051.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=CCO57_RS12465;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817051.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 294957 295373 . - . ID=gene-CCO57_RS12470;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=CCO57_RS12470;old_locus_tag=CCO57_12455 NZ_NPMC01000006.1 Protein Homology CDS 294957 295373 . - 0 ID=cds-WP_000729470.1;Parent=gene-CCO57_RS12470;Dbxref=GenBank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=CCO57_RS12470;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 295386 296606 . - . ID=gene-CCO57_RS12475;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=CCO57_RS12475;old_locus_tag=CCO57_12460 NZ_NPMC01000006.1 Protein Homology CDS 295386 296606 . - 0 ID=cds-WP_000143859.1;Parent=gene-CCO57_RS12475;Dbxref=GenBank:WP_000143859.1;Name=WP_000143859.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=CCO57_RS12475;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 296603 297874 . - . ID=gene-CCO57_RS12480;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CCO57_RS12480;old_locus_tag=CCO57_12465 NZ_NPMC01000006.1 Protein Homology CDS 296603 297874 . - 0 ID=cds-WP_023220525.1;Parent=gene-CCO57_RS12480;Dbxref=GenBank:WP_023220525.1;Name=WP_023220525.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=CCO57_RS12480;product=Fe-S cluster assembly protein SufD;protein_id=WP_023220525.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 297849 298595 . - . ID=gene-CCO57_RS12485;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CCO57_RS12485;old_locus_tag=CCO57_12470 NZ_NPMC01000006.1 Protein Homology CDS 297849 298595 . - 0 ID=cds-WP_000948904.1;Parent=gene-CCO57_RS12485;Dbxref=GenBank:WP_000948904.1;Name=WP_000948904.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=CCO57_RS12485;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948904.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 298612 300099 . - . ID=gene-CCO57_RS12490;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CCO57_RS12490;old_locus_tag=CCO57_12475 NZ_NPMC01000006.1 Protein Homology CDS 298612 300099 . - 0 ID=cds-WP_000089383.1;Parent=gene-CCO57_RS12490;Dbxref=GenBank:WP_000089383.1;Name=WP_000089383.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=CCO57_RS12490;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089383.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 300108 300476 . - . ID=gene-CCO57_RS12495;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=CCO57_RS12495;old_locus_tag=CCO57_12480 NZ_NPMC01000006.1 Protein Homology CDS 300108 300476 . - 0 ID=cds-WP_000418969.1;Parent=gene-CCO57_RS12495;Dbxref=GenBank:WP_000418969.1;Name=WP_000418969.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=CCO57_RS12495;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418969.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 300903 302249 . + . ID=gene-CCO57_RS12500;Name=CCO57_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12500;old_locus_tag=CCO57_12485 NZ_NPMC01000006.1 Protein Homology CDS 300903 302249 . + 0 ID=cds-WP_000261857.1;Parent=gene-CCO57_RS12500;Dbxref=GenBank:WP_000261857.1;Name=WP_000261857.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=CCO57_RS12500;product=L-cystine transporter;protein_id=WP_000261857.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 302537 302725 . - . ID=gene-CCO57_RS12505;Name=CCO57_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12505;old_locus_tag=CCO57_12490 NZ_NPMC01000006.1 Protein Homology CDS 302537 302725 . - 0 ID=cds-WP_001537749.1;Parent=gene-CCO57_RS12505;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=CCO57_RS12505;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 302824 303234 . - . ID=gene-CCO57_RS12510;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CCO57_RS12510;old_locus_tag=CCO57_12495 NZ_NPMC01000006.1 Protein Homology CDS 302824 303234 . - 0 ID=cds-WP_000637926.1;Parent=gene-CCO57_RS12510;Dbxref=GenBank:WP_000637926.1;Name=WP_000637926.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=CCO57_RS12510;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637926.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 303231 306287 . - . ID=gene-CCO57_RS12515;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=CCO57_RS12515;old_locus_tag=CCO57_12500 NZ_NPMC01000006.1 Protein Homology CDS 303231 306287 . - 0 ID=cds-WP_038393840.1;Parent=gene-CCO57_RS12515;Dbxref=GenBank:WP_038393840.1;Name=WP_038393840.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=CCO57_RS12515;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_038393840.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 306552 307670 . + . ID=gene-CCO57_RS12520;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=CCO57_RS12520;old_locus_tag=CCO57_12505 NZ_NPMC01000006.1 Protein Homology CDS 306552 307670 . + 0 ID=cds-WP_000248615.1;Parent=gene-CCO57_RS12520;Dbxref=GenBank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=CCO57_RS12520;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11 NZ_NPMC01000006.1 RefSeq gene 307853 307960 . + . ID=gene-CCO57_RS12525;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=CCO57_RS12525;old_locus_tag=CCO57_12510 NZ_NPMC01000006.1 cmsearch antisense_RNA 307853 307960 . + . ID=rna-CCO57_RS12525;Parent=gene-CCO57_RS12525;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS12525;product=antisense sRNA RprA NZ_NPMC01000006.1 cmsearch exon 307853 307960 . + . ID=exon-CCO57_RS12525-1;Parent=rna-CCO57_RS12525;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS12525;product=antisense sRNA RprA ##sequence-region NZ_NPMC01000007.1 1 299702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000007.1 RefSeq region 1 299702 . + . ID=NZ_NPMC01000007.1:1..299702;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000007.1 RefSeq gene 176 263 . - . ID=gene-CCO57_RS12530;Name=CCO57_RS12530;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS12530;old_locus_tag=CCO57_12515 NZ_NPMC01000007.1 tRNAscan-SE tRNA 176 263 . - . ID=rna-CCO57_RS12530;Parent=gene-CCO57_RS12530;anticodon=(pos:complement(227..229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS12530;product=tRNA-Ser NZ_NPMC01000007.1 tRNAscan-SE exon 176 263 . - . ID=exon-CCO57_RS12530-1;Parent=rna-CCO57_RS12530;anticodon=(pos:complement(227..229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS12530;product=tRNA-Ser NZ_NPMC01000007.1 RefSeq gene 412 1089 . - . ID=gene-CCO57_RS12535;Name=CCO57_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12535;old_locus_tag=CCO57_12520 NZ_NPMC01000007.1 Protein Homology CDS 412 1089 . - 0 ID=cds-WP_000097893.1;Parent=gene-CCO57_RS12535;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=CCO57_RS12535;product=hydrolase;protein_id=WP_000097893.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 1109 1969 . - . ID=gene-CCO57_RS12540;Name=CCO57_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12540;old_locus_tag=CCO57_12525 NZ_NPMC01000007.1 Protein Homology CDS 1109 1969 . - 0 ID=cds-WP_000809969.1;Parent=gene-CCO57_RS12540;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=CCO57_RS12540;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 2078 2989 . + . ID=gene-CCO57_RS12545;Name=CCO57_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12545;old_locus_tag=CCO57_12530 NZ_NPMC01000007.1 Protein Homology CDS 2078 2989 . + 0 ID=cds-WP_000597928.1;Parent=gene-CCO57_RS12545;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=CCO57_RS12545;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 3080 3298 . - . ID=gene-CCO57_RS12550;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CCO57_RS12550;old_locus_tag=CCO57_12535 NZ_NPMC01000007.1 Protein Homology CDS 3080 3298 . - 0 ID=cds-WP_001040187.1;Parent=gene-CCO57_RS12550;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=CCO57_RS12550;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 3610 4314 . - . ID=gene-CCO57_RS12560;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=CCO57_RS12560;old_locus_tag=CCO57_12545 NZ_NPMC01000007.1 Protein Homology CDS 3610 4314 . - 0 ID=cds-WP_001241640.1;Parent=gene-CCO57_RS12560;Dbxref=GenBank:WP_001241640.1;Name=WP_001241640.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=CCO57_RS12560;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241640.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 4359 6080 . - . ID=gene-CCO57_RS12565;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=CCO57_RS12565;old_locus_tag=CCO57_12550 NZ_NPMC01000007.1 Protein Homology CDS 4359 6080 . - 0 ID=cds-WP_001202249.1;Parent=gene-CCO57_RS12565;Dbxref=GenBank:WP_001202249.1;Name=WP_001202249.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=CCO57_RS12565;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202249.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 6081 7847 . - . ID=gene-CCO57_RS12570;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=CCO57_RS12570;old_locus_tag=CCO57_12555 NZ_NPMC01000007.1 Protein Homology CDS 6081 7847 . - 0 ID=cds-WP_001044531.1;Parent=gene-CCO57_RS12570;Dbxref=GenBank:WP_001044531.1;Name=WP_001044531.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=CCO57_RS12570;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044531.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 7962 8930 . - . ID=gene-CCO57_RS12575;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CCO57_RS12575;old_locus_tag=CCO57_12560 NZ_NPMC01000007.1 Protein Homology CDS 7962 8930 . - 0 ID=cds-WP_079898450.1;Parent=gene-CCO57_RS12575;Dbxref=GenBank:WP_079898450.1;Name=WP_079898450.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=CCO57_RS12575;product=thioredoxin-disulfide reductase;protein_id=WP_079898450.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 9477 9971 . + . ID=gene-CCO57_RS12585;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=CCO57_RS12585;old_locus_tag=CCO57_12570 NZ_NPMC01000007.1 Protein Homology CDS 9477 9971 . + 0 ID=cds-WP_000228469.1;Parent=gene-CCO57_RS12585;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=CCO57_RS12585;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 10106 14101 . + . ID=gene-CCO57_RS12590;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=CCO57_RS12590;old_locus_tag=CCO57_12575 NZ_NPMC01000007.1 Protein Homology CDS 10106 14101 . + 0 ID=cds-WP_094914993.1;Parent=gene-CCO57_RS12590;Dbxref=GenBank:WP_094914993.1;Name=WP_094914993.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=CCO57_RS12590;product=DNA translocase FtsK;protein_id=WP_094914993.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 14244 14855 . + . ID=gene-CCO57_RS12595;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=CCO57_RS12595;old_locus_tag=CCO57_12580 NZ_NPMC01000007.1 Protein Homology CDS 14244 14855 . + 0 ID=cds-WP_001519746.1;Parent=gene-CCO57_RS12595;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=CCO57_RS12595;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 14865 16208 . + . ID=gene-CCO57_RS12600;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=CCO57_RS12600;old_locus_tag=CCO57_12585 NZ_NPMC01000007.1 Protein Homology CDS 14865 16208 . + 0 ID=cds-WP_094914966.1;Parent=gene-CCO57_RS12600;Dbxref=GenBank:WP_094914966.1;Name=WP_094914966.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=CCO57_RS12600;product=replication-associated recombination protein RarA;protein_id=WP_094914966.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 16467 17759 . + . ID=gene-CCO57_RS12610;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CCO57_RS12610;old_locus_tag=CCO57_12595 NZ_NPMC01000007.1 Protein Homology CDS 16467 17759 . + 0 ID=cds-WP_000886699.1;Parent=gene-CCO57_RS12610;Dbxref=GenBank:WP_000886699.1;Name=WP_000886699.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=CCO57_RS12610;product=serine--tRNA ligase;protein_id=WP_000886699.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 17997 20441 . + . ID=gene-CCO57_RS12615;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=CCO57_RS12615;old_locus_tag=CCO57_12600 NZ_NPMC01000007.1 Protein Homology CDS 17997 20441 . + 0 ID=cds-WP_000850250.1;Parent=gene-CCO57_RS12615;Dbxref=GenBank:WP_000850250.1;Name=WP_000850250.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=CCO57_RS12615;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850250.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 20452 21069 . + . ID=gene-CCO57_RS12620;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO57_RS12620;old_locus_tag=CCO57_12605 NZ_NPMC01000007.1 Protein Homology CDS 20452 21069 . + 0 ID=cds-WP_000213069.1;Parent=gene-CCO57_RS12620;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO57_RS12620;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 21071 21934 . + . ID=gene-CCO57_RS12625;Name=CCO57_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12625;old_locus_tag=CCO57_12610 NZ_NPMC01000007.1 Protein Homology CDS 21071 21934 . + 0 ID=cds-WP_000534686.1;Parent=gene-CCO57_RS12625;Dbxref=GenBank:WP_000534686.1;Name=WP_000534686.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=CCO57_RS12625;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534686.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 22284 23432 . + . ID=gene-CCO57_RS12630;Name=CCO57_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12630;old_locus_tag=CCO57_12615 NZ_NPMC01000007.1 Protein Homology CDS 22284 23432 . + 0 ID=cds-WP_000109271.1;Parent=gene-CCO57_RS12630;Dbxref=GenBank:WP_000109271.1;Name=WP_000109271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=CCO57_RS12630;product=MFS transporter;protein_id=WP_000109271.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 23650 25071 . + . ID=gene-CCO57_RS12635;Name=CCO57_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12635;old_locus_tag=CCO57_12620 NZ_NPMC01000007.1 Protein Homology CDS 23650 25071 . + 0 ID=cds-WP_058215240.1;Parent=gene-CCO57_RS12635;Dbxref=GenBank:WP_058215240.1;Name=WP_058215240.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=CCO57_RS12635;product=APC family permease;protein_id=WP_058215240.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 25364 26161 . - . ID=gene-CCO57_RS12640;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CCO57_RS12640;old_locus_tag=CCO57_12625 NZ_NPMC01000007.1 Protein Homology CDS 25364 26161 . - 0 ID=cds-WP_000067928.1;Parent=gene-CCO57_RS12640;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=CCO57_RS12640;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11 NZ_NPMC01000007.1 RefSeq pseudogene 26280 26610 . - . ID=gene-CCO57_RS24605;Name=CCO57_RS24605;end_range=26610,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24605;old_locus_tag=CCO57_12630;partial=true;pseudo=true NZ_NPMC01000007.1 Protein Homology CDS 26280 26610 . - 0 ID=cds-CCO57_RS24605;Parent=gene-CCO57_RS24605;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=26610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=CCO57_RS24605;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 26747 27706 . + . ID=gene-CCO57_RS12650;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=CCO57_RS12650;old_locus_tag=CCO57_12635 NZ_NPMC01000007.1 Protein Homology CDS 26747 27706 . + 0 ID=cds-WP_080167149.1;Parent=gene-CCO57_RS12650;Dbxref=GenBank:WP_080167149.1;Name=WP_080167149.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=CCO57_RS12650;product=type III secretion system effector SopD2;protein_id=WP_080167149.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 27780 30062 . - . ID=gene-CCO57_RS12655;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO57_RS12655;old_locus_tag=CCO57_12640 NZ_NPMC01000007.1 Protein Homology CDS 27780 30062 . - 0 ID=cds-WP_001292803.1;Parent=gene-CCO57_RS12655;Dbxref=GenBank:WP_001292803.1;Name=WP_001292803.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=CCO57_RS12655;product=formate C-acetyltransferase;protein_id=WP_001292803.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 30122 30979 . - . ID=gene-CCO57_RS12660;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=CCO57_RS12660;old_locus_tag=CCO57_12645 NZ_NPMC01000007.1 Protein Homology CDS 30122 30979 . - 0 ID=cds-WP_000642539.1;Parent=gene-CCO57_RS12660;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=CCO57_RS12660;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 31384 33144 . - . ID=gene-CCO57_RS12665;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=CCO57_RS12665;old_locus_tag=CCO57_12650 NZ_NPMC01000007.1 Protein Homology CDS 31384 33144 . - 0 ID=cds-WP_001530487.1;Parent=gene-CCO57_RS12665;Dbxref=GenBank:WP_001530487.1;Name=WP_001530487.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=CCO57_RS12665;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_001530487.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 33281 33973 . + . ID=gene-CCO57_RS12670;Name=CCO57_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12670;old_locus_tag=CCO57_12655 NZ_NPMC01000007.1 Protein Homology CDS 33281 33973 . + 0 ID=cds-WP_000642868.1;Parent=gene-CCO57_RS12670;Dbxref=GenBank:WP_000642868.1;Name=WP_000642868.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=CCO57_RS12670;product=DUF421 domain-containing protein;protein_id=WP_000642868.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 34159 35247 . + . ID=gene-CCO57_RS12675;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=CCO57_RS12675;old_locus_tag=CCO57_12660 NZ_NPMC01000007.1 Protein Homology CDS 34159 35247 . + 0 ID=cds-WP_000079590.1;Parent=gene-CCO57_RS12675;Dbxref=GenBank:WP_000079590.1;Name=WP_000079590.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=CCO57_RS12675;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000079590.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 35318 36601 . + . ID=gene-CCO57_RS12680;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CCO57_RS12680;old_locus_tag=CCO57_12665 NZ_NPMC01000007.1 Protein Homology CDS 35318 36601 . + 0 ID=cds-WP_000445184.1;Parent=gene-CCO57_RS12680;Dbxref=GenBank:WP_000445184.1;Name=WP_000445184.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=CCO57_RS12680;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445184.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 36744 37505 . + . ID=gene-CCO57_RS12685;Name=CCO57_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12685;old_locus_tag=CCO57_12670 NZ_NPMC01000007.1 Protein Homology CDS 36744 37505 . + 0 ID=cds-WP_000792301.1;Parent=gene-CCO57_RS12685;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=CCO57_RS12685;product=M48 family metallopeptidase;protein_id=WP_000792301.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 37678 38361 . + . ID=gene-CCO57_RS12690;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CCO57_RS12690;old_locus_tag=CCO57_12675 NZ_NPMC01000007.1 Protein Homology CDS 37678 38361 . + 0 ID=cds-WP_000125007.1;Parent=gene-CCO57_RS12690;Dbxref=GenBank:WP_000125007.1;Name=WP_000125007.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=CCO57_RS12690;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 38475 40148 . + . ID=gene-CCO57_RS12695;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CCO57_RS12695;old_locus_tag=CCO57_12680 NZ_NPMC01000007.1 Protein Homology CDS 38475 40148 . + 0 ID=cds-WP_000140324.1;Parent=gene-CCO57_RS12695;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=CCO57_RS12695;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 40304 40588 . + . ID=gene-CCO57_RS12700;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=CCO57_RS12700;old_locus_tag=CCO57_12685 NZ_NPMC01000007.1 Protein Homology CDS 40304 40588 . + 0 ID=cds-WP_000167332.1;Parent=gene-CCO57_RS12700;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=CCO57_RS12700;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 40818 43082 . + . ID=gene-CCO57_RS12705;Name=CCO57_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12705;old_locus_tag=CCO57_12690 NZ_NPMC01000007.1 Protein Homology CDS 40818 43082 . + 0 ID=cds-WP_079846205.1;Parent=gene-CCO57_RS12705;Dbxref=GenBank:WP_079846205.1;Name=WP_079846205.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=CCO57_RS12705;product=ComEC family protein;protein_id=WP_079846205.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 43119 44867 . + . ID=gene-CCO57_RS12710;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=CCO57_RS12710;old_locus_tag=CCO57_12695 NZ_NPMC01000007.1 Protein Homology CDS 43119 44867 . + 0 ID=cds-WP_000551246.1;Parent=gene-CCO57_RS12710;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=CCO57_RS12710;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 44864 45841 . + . ID=gene-CCO57_RS12715;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CCO57_RS12715;old_locus_tag=CCO57_12700 NZ_NPMC01000007.1 Protein Homology CDS 44864 45841 . + 0 ID=cds-WP_001528775.1;Parent=gene-CCO57_RS12715;Dbxref=GenBank:WP_001528775.1;Name=WP_001528775.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=CCO57_RS12715;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_001528775.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 45885 47117 . + . ID=gene-CCO57_RS12720;Name=CCO57_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12720;old_locus_tag=CCO57_12705 NZ_NPMC01000007.1 Protein Homology CDS 45885 47117 . + 0 ID=cds-WP_094914968.1;Parent=gene-CCO57_RS12720;Dbxref=GenBank:WP_094914968.1;Name=WP_094914968.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=CCO57_RS12720;product=winged helix-turn-helix domain-containing protein;protein_id=WP_094914968.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 47169 47351 . + . ID=gene-CCO57_RS12725;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=CCO57_RS12725;old_locus_tag=CCO57_12710 NZ_NPMC01000007.1 Protein Homology CDS 47169 47351 . + 0 ID=cds-WP_000350056.1;Parent=gene-CCO57_RS12725;Dbxref=GenBank:WP_000350056.1;Name=WP_000350056.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=CCO57_RS12725;product=protein YcaR;protein_id=WP_000350056.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 47348 48094 . + . ID=gene-CCO57_RS12730;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CCO57_RS12730;old_locus_tag=CCO57_12715 NZ_NPMC01000007.1 Protein Homology CDS 47348 48094 . + 0 ID=cds-WP_000011576.1;Parent=gene-CCO57_RS12730;Dbxref=GenBank:WP_000011576.1;Name=WP_000011576.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=CCO57_RS12730;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011576.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 48305 49198 . + . ID=gene-CCO57_RS12735;Name=CCO57_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12735;old_locus_tag=CCO57_12720 NZ_NPMC01000007.1 Protein Homology CDS 48305 49198 . + 0 ID=cds-WP_000436893.1;Parent=gene-CCO57_RS12735;Dbxref=GenBank:WP_000436893.1;Name=WP_000436893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=CCO57_RS12735;product=YcbJ family phosphotransferase;protein_id=WP_000436893.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 49178 49954 . - . ID=gene-CCO57_RS12740;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=CCO57_RS12740;old_locus_tag=CCO57_12725 NZ_NPMC01000007.1 Protein Homology CDS 49178 49954 . - 0 ID=cds-WP_000899550.1;Parent=gene-CCO57_RS12740;Dbxref=GenBank:WP_000899550.1;Name=WP_000899550.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=CCO57_RS12740;product=envelope biogenesis factor ElyC;protein_id=WP_000899550.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 50090 50893 . + . ID=gene-CCO57_RS12745;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=CCO57_RS12745;old_locus_tag=CCO57_12730 NZ_NPMC01000007.1 Protein Homology CDS 50090 50893 . + 0 ID=cds-WP_001154025.1;Parent=gene-CCO57_RS12745;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=CCO57_RS12745;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 50886 52208 . + . ID=gene-CCO57_RS12750;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=CCO57_RS12750;old_locus_tag=CCO57_12735 NZ_NPMC01000007.1 Protein Homology CDS 50886 52208 . + 0 ID=cds-WP_001288828.1;Parent=gene-CCO57_RS12750;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=CCO57_RS12750;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 52189 52893 . + . ID=gene-CCO57_RS12755;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=CCO57_RS12755;old_locus_tag=CCO57_12740 NZ_NPMC01000007.1 Protein Homology CDS 52189 52893 . + 0 ID=cds-WP_000060024.1;Parent=gene-CCO57_RS12755;Dbxref=GenBank:WP_000060024.1;Name=WP_000060024.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=CCO57_RS12755;product=chromosome partition protein MukE;protein_id=WP_000060024.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 52893 57359 . + . ID=gene-CCO57_RS12760;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=CCO57_RS12760;old_locus_tag=CCO57_12745 NZ_NPMC01000007.1 Protein Homology CDS 52893 57359 . + 0 ID=cds-WP_063916596.1;Parent=gene-CCO57_RS12760;Dbxref=GenBank:WP_063916596.1;Name=WP_063916596.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=CCO57_RS12760;product=chromosome partition protein MukB;protein_id=WP_063916596.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 57704 59551 . + . ID=gene-CCO57_RS12765;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=CCO57_RS12765;old_locus_tag=CCO57_12750 NZ_NPMC01000007.1 Protein Homology CDS 57704 59551 . + 0 ID=cds-WP_094914969.1;Parent=gene-CCO57_RS12765;Dbxref=GenBank:WP_094914969.1;Name=WP_094914969.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=CCO57_RS12765;product=L%2CD-transpeptidase;protein_id=WP_094914969.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 59811 60359 . + . ID=gene-CCO57_RS12775;Name=CCO57_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12775;old_locus_tag=CCO57_12760 NZ_NPMC01000007.1 Protein Homology CDS 59811 60359 . + 0 ID=cds-WP_000357052.1;Parent=gene-CCO57_RS12775;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=CCO57_RS12775;product=YcbK family protein;protein_id=WP_000357052.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 60387 61034 . + . ID=gene-CCO57_RS12780;Name=CCO57_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12780;old_locus_tag=CCO57_12765 NZ_NPMC01000007.1 Protein Homology CDS 60387 61034 . + 0 ID=cds-WP_001109471.1;Parent=gene-CCO57_RS12780;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=CCO57_RS12780;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 61096 62286 . - . ID=gene-CCO57_RS12785;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=CCO57_RS12785;old_locus_tag=CCO57_12770 NZ_NPMC01000007.1 Protein Homology CDS 61096 62286 . - 0 ID=cds-WP_000462656.1;Parent=gene-CCO57_RS12785;Dbxref=GenBank:WP_000462656.1;Name=WP_000462656.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=CCO57_RS12785;product=aspartate transaminase;protein_id=WP_000462656.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 62471 63562 . - . ID=gene-CCO57_RS12790;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=CCO57_RS12790;old_locus_tag=CCO57_12775 NZ_NPMC01000007.1 Protein Homology CDS 62471 63562 . - 0 ID=cds-WP_000977709.1;Parent=gene-CCO57_RS12790;Dbxref=GenBank:WP_000977709.1;Name=WP_000977709.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=CCO57_RS12790;product=porin OmpF;protein_id=WP_000977709.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 64170 65570 . - . ID=gene-CCO57_RS12795;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CCO57_RS12795;old_locus_tag=CCO57_12780 NZ_NPMC01000007.1 Protein Homology CDS 64170 65570 . - 0 ID=cds-WP_023226042.1;Parent=gene-CCO57_RS12795;Dbxref=GenBank:WP_023226042.1;Name=WP_023226042.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=CCO57_RS12795;product=asparagine--tRNA ligase;protein_id=WP_023226042.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 65771 66232 . - . ID=gene-CCO57_RS12800;Name=CCO57_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12800;old_locus_tag=CCO57_12785 NZ_NPMC01000007.1 Protein Homology CDS 65771 66232 . - 0 ID=cds-WP_000762343.1;Parent=gene-CCO57_RS12800;Dbxref=GenBank:WP_000762343.1;Name=WP_000762343.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=CCO57_RS12800;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000762343.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 66549 67763 . + . ID=gene-CCO57_RS12810;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=CCO57_RS12810;old_locus_tag=CCO57_12795 NZ_NPMC01000007.1 Protein Homology CDS 66549 67763 . + 0 ID=cds-WP_058663564.1;Parent=gene-CCO57_RS12810;Dbxref=GenBank:WP_058663564.1;Name=WP_058663564.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=CCO57_RS12810;product=diaminopropionate ammonia-lyase;protein_id=WP_058663564.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 68009 69442 . + . ID=gene-CCO57_RS12815;Name=CCO57_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12815;old_locus_tag=CCO57_12800 NZ_NPMC01000007.1 Protein Homology CDS 68009 69442 . + 0 ID=cds-WP_094914970.1;Parent=gene-CCO57_RS12815;Dbxref=GenBank:WP_094914970.1;Name=WP_094914970.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=CCO57_RS12815;product=alanine/glycine:cation symporter family protein;protein_id=WP_094914970.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 69522 70724 . - . ID=gene-CCO57_RS12820;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CCO57_RS12820;old_locus_tag=CCO57_12805 NZ_NPMC01000007.1 Protein Homology CDS 69522 70724 . - 0 ID=cds-WP_000191413.1;Parent=gene-CCO57_RS12820;Dbxref=GenBank:WP_000191413.1;Name=WP_000191413.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=CCO57_RS12820;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191413.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 70991 73603 . + . ID=gene-CCO57_RS12825;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=CCO57_RS12825;old_locus_tag=CCO57_12810 NZ_NPMC01000007.1 Protein Homology CDS 70991 73603 . + 0 ID=cds-WP_094914971.1;Parent=gene-CCO57_RS12825;Dbxref=GenBank:WP_094914971.1;Name=WP_094914971.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=CCO57_RS12825;product=aminopeptidase N;protein_id=WP_094914971.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 73811 74821 . + . ID=gene-CCO57_RS12830;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=CCO57_RS12830;old_locus_tag=CCO57_12815 NZ_NPMC01000007.1 Protein Homology CDS 73811 74821 . + 0 ID=cds-WP_094914972.1;Parent=gene-CCO57_RS12830;Dbxref=GenBank:WP_094914972.1;Name=WP_094914972.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=CCO57_RS12830;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_094914972.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 74988 75530 . + . ID=gene-CCO57_RS12835;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=CCO57_RS12835;old_locus_tag=CCO57_12820 NZ_NPMC01000007.1 Protein Homology CDS 74988 75530 . + 0 ID=cds-WP_001220671.1;Parent=gene-CCO57_RS12835;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=CCO57_RS12835;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 75527 76636 . - . ID=gene-CCO57_RS12840;Name=CCO57_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12840;old_locus_tag=CCO57_12825 NZ_NPMC01000007.1 Protein Homology CDS 75527 76636 . - 0 ID=cds-WP_000224062.1;Parent=gene-CCO57_RS12840;Dbxref=GenBank:WP_000224062.1;Name=WP_000224062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=CCO57_RS12840;product=YcbX family protein;protein_id=WP_000224062.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 76735 78843 . + . ID=gene-CCO57_RS12845;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=CCO57_RS12845;old_locus_tag=CCO57_12830 NZ_NPMC01000007.1 Protein Homology CDS 76735 78843 . + 0 ID=cds-WP_094888692.1;Parent=gene-CCO57_RS12845;Dbxref=GenBank:WP_094888692.1;Name=WP_094888692.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=CCO57_RS12845;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_094888692.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 78856 80763 . + . ID=gene-CCO57_RS12850;Name=CCO57_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12850;old_locus_tag=CCO57_12835 NZ_NPMC01000007.1 Protein Homology CDS 78856 80763 . + 0 ID=cds-WP_000053043.1;Parent=gene-CCO57_RS12850;Dbxref=GenBank:WP_000053043.1;Name=WP_000053043.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=CCO57_RS12850;product=ABC transporter ATP-binding protein;protein_id=WP_000053043.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 80778 82031 . + . ID=gene-CCO57_RS12855;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=CCO57_RS12855;old_locus_tag=CCO57_12840 NZ_NPMC01000007.1 Protein Homology CDS 80778 82031 . + 0 ID=cds-WP_000333143.1;Parent=gene-CCO57_RS12855;Dbxref=GenBank:WP_000333143.1;Name=WP_000333143.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=CCO57_RS12855;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333143.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 82036 83676 . + . ID=gene-CCO57_RS12860;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=CCO57_RS12860;old_locus_tag=CCO57_12845 NZ_NPMC01000007.1 Protein Homology CDS 82036 83676 . + 0 ID=cds-WP_000433412.1;Parent=gene-CCO57_RS12860;Dbxref=GenBank:WP_000433412.1;Name=WP_000433412.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=CCO57_RS12860;product=intermembrane transport protein PqiB;protein_id=WP_000433412.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 83673 84236 . + . ID=gene-CCO57_RS12865;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=CCO57_RS12865;old_locus_tag=CCO57_12850 NZ_NPMC01000007.1 Protein Homology CDS 83673 84236 . + 0 ID=cds-WP_000759136.1;Parent=gene-CCO57_RS12865;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=CCO57_RS12865;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 84492 84659 . + . ID=gene-CCO57_RS12870;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=CCO57_RS12870;old_locus_tag=CCO57_12855 NZ_NPMC01000007.1 Protein Homology CDS 84492 84659 . + 0 ID=cds-WP_001537784.1;Parent=gene-CCO57_RS12870;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=CCO57_RS12870;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 84759 85277 . - . ID=gene-CCO57_RS12875;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=CCO57_RS12875;old_locus_tag=CCO57_12860 NZ_NPMC01000007.1 Protein Homology CDS 84759 85277 . - 0 ID=cds-WP_000227928.1;Parent=gene-CCO57_RS12875;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=CCO57_RS12875;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 85346 87106 . - . ID=gene-CCO57_RS12880;Name=CCO57_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12880;old_locus_tag=CCO57_12865 NZ_NPMC01000007.1 Protein Homology CDS 85346 87106 . - 0 ID=cds-WP_000156458.1;Parent=gene-CCO57_RS12880;Dbxref=GenBank:WP_000156458.1;Name=WP_000156458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=CCO57_RS12880;product=AAA family ATPase;protein_id=WP_000156458.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 87292 87744 . + . ID=gene-CCO57_RS12885;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=CCO57_RS12885;old_locus_tag=CCO57_12870 NZ_NPMC01000007.1 Protein Homology CDS 87292 87744 . + 0 ID=cds-WP_000877172.1;Parent=gene-CCO57_RS12885;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=CCO57_RS12885;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 87816 88868 . - . ID=gene-CCO57_RS12890;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=CCO57_RS12890;old_locus_tag=CCO57_12875 NZ_NPMC01000007.1 Protein Homology CDS 87816 88868 . - 0 ID=cds-WP_001562588.1;Parent=gene-CCO57_RS12890;Dbxref=GenBank:WP_001562588.1;Name=WP_001562588.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=CCO57_RS12890;product=porin OmpA;protein_id=WP_001562588.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 89225 89734 . - . ID=gene-CCO57_RS12895;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=CCO57_RS12895;old_locus_tag=CCO57_12880 NZ_NPMC01000007.1 Protein Homology CDS 89225 89734 . - 0 ID=cds-WP_000288732.1;Parent=gene-CCO57_RS12895;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=CCO57_RS12895;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 89951 90556 . + . ID=gene-CCO57_RS12900;Name=CCO57_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12900;old_locus_tag=CCO57_12885 NZ_NPMC01000007.1 Protein Homology CDS 89951 90556 . + 0 ID=cds-WP_001202375.1;Parent=gene-CCO57_RS12900;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=CCO57_RS12900;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 90543 92696 . - . ID=gene-CCO57_RS12905;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=CCO57_RS12905;old_locus_tag=CCO57_12890 NZ_NPMC01000007.1 Protein Homology CDS 90543 92696 . - 0 ID=cds-WP_000950879.1;Parent=gene-CCO57_RS12905;Dbxref=GenBank:WP_000950879.1;Name=WP_000950879.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=CCO57_RS12905;product=YccS family putative transporter;protein_id=WP_000950879.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 92715 93161 . - . ID=gene-CCO57_RS12910;Name=CCO57_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12910;old_locus_tag=CCO57_12895 NZ_NPMC01000007.1 Protein Homology CDS 92715 93161 . - 0 ID=cds-WP_001261222.1;Parent=gene-CCO57_RS12910;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=CCO57_RS12910;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 93285 95339 . + . ID=gene-CCO57_RS12915;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=CCO57_RS12915;old_locus_tag=CCO57_12900 NZ_NPMC01000007.1 Protein Homology CDS 93285 95339 . + 0 ID=cds-WP_094914973.1;Parent=gene-CCO57_RS12915;Dbxref=GenBank:WP_094914973.1;Name=WP_094914973.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=CCO57_RS12915;product=DNA helicase IV;protein_id=WP_094914973.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 95375 95833 . - . ID=gene-CCO57_RS12920;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=CCO57_RS12920;old_locus_tag=CCO57_12905 NZ_NPMC01000007.1 Protein Homology CDS 95375 95833 . - 0 ID=cds-WP_000424187.1;Parent=gene-CCO57_RS12920;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=CCO57_RS12920;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 95928 96590 . - . ID=gene-CCO57_RS12925;Name=CCO57_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12925;old_locus_tag=CCO57_12910 NZ_NPMC01000007.1 Protein Homology CDS 95928 96590 . - 0 ID=cds-WP_000847719.1;Parent=gene-CCO57_RS12925;Dbxref=GenBank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=CCO57_RS12925;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 96764 97177 . + . ID=gene-CCO57_RS12930;Name=CCO57_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12930;old_locus_tag=CCO57_12915 NZ_NPMC01000007.1 Protein Homology CDS 96764 97177 . + 0 ID=cds-WP_001537782.1;Parent=gene-CCO57_RS12930;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=CCO57_RS12930;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 97222 97539 . - . ID=gene-CCO57_RS12935;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=CCO57_RS12935;old_locus_tag=CCO57_12920 NZ_NPMC01000007.1 Protein Homology CDS 97222 97539 . - 0 ID=cds-WP_000561983.1;Parent=gene-CCO57_RS12935;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=CCO57_RS12935;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 97597 98808 . - . ID=gene-CCO57_RS12940;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=CCO57_RS12940;old_locus_tag=CCO57_12925 NZ_NPMC01000007.1 Protein Homology CDS 97597 98808 . - 0 ID=cds-WP_000140480.1;Parent=gene-CCO57_RS12940;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=CCO57_RS12940;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 99023 99571 . + . ID=gene-CCO57_RS12945;Name=CCO57_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12945;old_locus_tag=CCO57_12930 NZ_NPMC01000007.1 Protein Homology CDS 99023 99571 . + 0 ID=cds-WP_000859416.1;Parent=gene-CCO57_RS12945;Dbxref=GenBank:WP_000859416.1;Name=WP_000859416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=CCO57_RS12945;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_000859416.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 99597 100376 . + . ID=gene-CCO57_RS12950;Name=CCO57_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS12950;old_locus_tag=CCO57_12935 NZ_NPMC01000007.1 Protein Homology CDS 99597 100376 . + 0 ID=cds-WP_000548082.1;Parent=gene-CCO57_RS12950;Dbxref=GenBank:WP_000548082.1;Name=WP_000548082.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=CCO57_RS12950;product=helix-turn-helix transcriptional regulator;protein_id=WP_000548082.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 100425 100706 . + . ID=gene-CCO57_RS12955;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=CCO57_RS12955;old_locus_tag=CCO57_12940 NZ_NPMC01000007.1 Protein Homology CDS 100425 100706 . + 0 ID=cds-WP_000072884.1;Parent=gene-CCO57_RS12955;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=CCO57_RS12955;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 100703 101032 . - . ID=gene-CCO57_RS12960;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=CCO57_RS12960;old_locus_tag=CCO57_12945 NZ_NPMC01000007.1 Protein Homology CDS 100703 101032 . - 0 ID=cds-WP_000904446.1;Parent=gene-CCO57_RS12960;Dbxref=GenBank:WP_000904446.1;Name=WP_000904446.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=CCO57_RS12960;product=sulfurtransferase TusE;protein_id=WP_000904446.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 101119 101778 . - . ID=gene-CCO57_RS12965;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=CCO57_RS12965;old_locus_tag=CCO57_12950 NZ_NPMC01000007.1 Protein Homology CDS 101119 101778 . - 0 ID=cds-WP_000374046.1;Parent=gene-CCO57_RS12965;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=CCO57_RS12965;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 102174 102261 . + . ID=gene-CCO57_RS12970;Name=CCO57_RS12970;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS12970;old_locus_tag=CCO57_12955 NZ_NPMC01000007.1 tRNAscan-SE tRNA 102174 102261 . + . ID=rna-CCO57_RS12970;Parent=gene-CCO57_RS12970;anticodon=(pos:102208..102210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS12970;product=tRNA-Ser NZ_NPMC01000007.1 tRNAscan-SE exon 102174 102261 . + . ID=exon-CCO57_RS12970-1;Parent=rna-CCO57_RS12970;anticodon=(pos:102208..102210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS12970;product=tRNA-Ser NZ_NPMC01000007.1 RefSeq pseudogene 102398 102898 . - . ID=gene-CCO57_RS12975;Name=pipA;end_range=102898,.;gbkey=Gene;gene=pipA;gene_biotype=pseudogene;locus_tag=CCO57_RS12975;old_locus_tag=CCO57_12960;partial=true;pseudo=true NZ_NPMC01000007.1 Protein Homology CDS 102398 102898 . - 0 ID=cds-CCO57_RS12975;Parent=gene-CCO57_RS12975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=102898,.;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=CCO57_RS12975;partial=true;product=type III secretion system effector protease PipA;pseudo=true;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 103070 103945 . - . ID=gene-CCO57_RS12980;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=CCO57_RS12980;old_locus_tag=CCO57_12965 NZ_NPMC01000007.1 Protein Homology CDS 103070 103945 . - 0 ID=cds-WP_094914975.1;Parent=gene-CCO57_RS12980;Dbxref=GenBank:WP_094914975.1;Name=WP_094914975.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=CCO57_RS12980;product=SPI-2 type III secretion system effector PipB;protein_id=WP_094914975.1;transl_table=11 NZ_NPMC01000007.1 RefSeq pseudogene 104163 104484 . + . ID=gene-CCO57_RS24610;Name=CCO57_RS24610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24610;pseudo=true NZ_NPMC01000007.1 Protein Homology CDS 104163 104484 . + 0 ID=cds-CCO57_RS24610;Parent=gene-CCO57_RS24610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=CCO57_RS24610;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 104494 104835 . - . ID=gene-CCO57_RS12990;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=CCO57_RS12990;old_locus_tag=CCO57_12975 NZ_NPMC01000007.1 Protein Homology CDS 104494 104835 . - 0 ID=cds-WP_000444724.1;Parent=gene-CCO57_RS12990;Dbxref=GenBank:WP_000444724.1;Name=WP_000444724.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=CCO57_RS12990;product=type III secretion system chaperone SigE;protein_id=WP_000444724.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 104852 106537 . - . ID=gene-CCO57_RS12995;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=CCO57_RS12995;old_locus_tag=CCO57_12980 NZ_NPMC01000007.1 Protein Homology CDS 104852 106537 . - 0 ID=cds-WP_001166958.1;Parent=gene-CCO57_RS12995;Dbxref=GenBank:WP_001166958.1;Name=WP_001166958.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=CCO57_RS12995;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_001166958.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 106869 107039 . + . ID=gene-CCO57_RS13000;Name=CCO57_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13000;old_locus_tag=CCO57_12985 NZ_NPMC01000007.1 Protein Homology CDS 106869 107039 . + 0 ID=cds-WP_001111006.1;Parent=gene-CCO57_RS13000;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=CCO57_RS13000;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 107040 107150 . - . ID=gene-CCO57_RS13005;Name=CCO57_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13005;old_locus_tag=CCO57_12990 NZ_NPMC01000007.1 Protein Homology CDS 107040 107150 . - 0 ID=cds-WP_000174815.1;Parent=gene-CCO57_RS13005;Dbxref=GenBank:WP_000174815.1;Name=WP_000174815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=CCO57_RS13005;product=hypothetical protein;protein_id=WP_000174815.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 107259 108728 . - . ID=gene-CCO57_RS13010;Name=CCO57_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13010;old_locus_tag=CCO57_12995 NZ_NPMC01000007.1 Protein Homology CDS 107259 108728 . - 0 ID=cds-WP_080177171.1;Parent=gene-CCO57_RS13010;Dbxref=GenBank:WP_080177171.1;Name=WP_080177171.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=CCO57_RS13010;product=C69 family dipeptidase;protein_id=WP_080177171.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 108901 110265 . - . ID=gene-CCO57_RS13015;Name=CCO57_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13015;old_locus_tag=CCO57_13000 NZ_NPMC01000007.1 Protein Homology CDS 108901 110265 . - 0 ID=cds-WP_023137466.1;Parent=gene-CCO57_RS13015;Dbxref=GenBank:WP_023137466.1;Name=WP_023137466.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=CCO57_RS13015;product=heavy metal sensor histidine kinase;protein_id=WP_023137466.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 110258 110938 . - . ID=gene-CCO57_RS13020;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=CCO57_RS13020;old_locus_tag=CCO57_13005 NZ_NPMC01000007.1 Protein Homology CDS 110258 110938 . - 0 ID=cds-WP_000698217.1;Parent=gene-CCO57_RS13020;Dbxref=GenBank:WP_000698217.1;Name=WP_000698217.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=CCO57_RS13020;product=response regulator transcription factor HprR;protein_id=WP_000698217.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 111074 111484 . + . ID=gene-CCO57_RS13025;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=CCO57_RS13025;old_locus_tag=CCO57_13010 NZ_NPMC01000007.1 Protein Homology CDS 111074 111484 . + 0 ID=cds-WP_000833182.1;Parent=gene-CCO57_RS13025;Dbxref=GenBank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=CCO57_RS13025;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 111817 112329 . - . ID=gene-CCO57_RS13035;Name=CCO57_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13035;old_locus_tag=CCO57_13020 NZ_NPMC01000007.1 Protein Homology CDS 111817 112329 . - 0 ID=cds-WP_001195556.1;Parent=gene-CCO57_RS13035;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=CCO57_RS13035;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 112347 113909 . - . ID=gene-CCO57_RS13040;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=CCO57_RS13040;old_locus_tag=CCO57_13025 NZ_NPMC01000007.1 Protein Homology CDS 112347 113909 . - 0 ID=cds-WP_000801496.1;Parent=gene-CCO57_RS13040;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=CCO57_RS13040;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 114127 114567 . - . ID=gene-CCO57_RS13045;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=CCO57_RS13045;old_locus_tag=CCO57_13030 NZ_NPMC01000007.1 Protein Homology CDS 114127 114567 . - 0 ID=cds-WP_000543922.1;Parent=gene-CCO57_RS13045;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=CCO57_RS13045;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 114842 116131 . + . ID=gene-CCO57_RS13050;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=CCO57_RS13050;old_locus_tag=CCO57_13035 NZ_NPMC01000007.1 Protein Homology CDS 114842 116131 . + 0 ID=cds-WP_000679210.1;Parent=gene-CCO57_RS13050;Dbxref=GenBank:WP_000679210.1;Name=WP_000679210.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=CCO57_RS13050;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679210.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 116128 117594 . + . ID=gene-CCO57_RS13055;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=CCO57_RS13055;old_locus_tag=CCO57_13040 NZ_NPMC01000007.1 Protein Homology CDS 116128 117594 . + 0 ID=cds-WP_000723524.1;Parent=gene-CCO57_RS13055;Dbxref=GenBank:WP_000723524.1;Name=WP_000723524.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=CCO57_RS13055;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723524.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 117596 118447 . + . ID=gene-CCO57_RS13060;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=CCO57_RS13060;old_locus_tag=CCO57_13045 NZ_NPMC01000007.1 Protein Homology CDS 117596 118447 . + 0 ID=cds-WP_000516978.1;Parent=gene-CCO57_RS13060;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=CCO57_RS13060;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 118457 118837 . + . ID=gene-CCO57_RS13065;Name=CCO57_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13065;old_locus_tag=CCO57_13050 NZ_NPMC01000007.1 Protein Homology CDS 118457 118837 . + 0 ID=cds-WP_001119849.1;Parent=gene-CCO57_RS13065;Dbxref=GenBank:WP_001119849.1;Name=WP_001119849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=CCO57_RS13065;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119849.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 118981 119784 . + . ID=gene-CCO57_RS13075;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=CCO57_RS13075;old_locus_tag=CCO57_13060 NZ_NPMC01000007.1 Protein Homology CDS 118981 119784 . + 0 ID=cds-WP_000884795.1;Parent=gene-CCO57_RS13075;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=CCO57_RS13075;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 119795 120586 . + . ID=gene-CCO57_RS13080;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=CCO57_RS13080;old_locus_tag=CCO57_13065 NZ_NPMC01000007.1 Protein Homology CDS 119795 120586 . + 0 ID=cds-WP_000785062.1;Parent=gene-CCO57_RS13080;Dbxref=GenBank:WP_000785062.1;Name=WP_000785062.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=CCO57_RS13080;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000785062.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 120659 122035 . + . ID=gene-CCO57_RS13085;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=CCO57_RS13085;old_locus_tag=CCO57_13070 NZ_NPMC01000007.1 Protein Homology CDS 120659 122035 . + 0 ID=cds-WP_001285795.1;Parent=gene-CCO57_RS13085;Dbxref=GenBank:WP_001285795.1;Name=WP_001285795.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=CCO57_RS13085;product=4-hydroxyphenylacetate permease;protein_id=WP_001285795.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 122045 122941 . + . ID=gene-CCO57_RS13090;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=CCO57_RS13090;old_locus_tag=CCO57_13075 NZ_NPMC01000007.1 Protein Homology CDS 122045 122941 . + 0 ID=cds-WP_000336602.1;Parent=gene-CCO57_RS13090;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=CCO57_RS13090;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 122955 123893 . + . ID=gene-CCO57_RS13095;Name=CCO57_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13095;old_locus_tag=CCO57_13080 NZ_NPMC01000007.1 Protein Homology CDS 122955 123893 . + 0 ID=cds-WP_000976564.1;Parent=gene-CCO57_RS13095;Dbxref=GenBank:WP_000976564.1;Name=WP_000976564.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=CCO57_RS13095;product=MBL fold metallo-hydrolase;protein_id=WP_000976564.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 124301 124663 . - . ID=gene-CCO57_RS13100;Name=CCO57_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13100;old_locus_tag=CCO57_13085 NZ_NPMC01000007.1 Protein Homology CDS 124301 124663 . - 0 ID=cds-WP_001537781.1;Parent=gene-CCO57_RS13100;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=CCO57_RS13100;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 125317 125622 . - . ID=gene-CCO57_RS13110;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=CCO57_RS13110;old_locus_tag=CCO57_13095 NZ_NPMC01000007.1 Protein Homology CDS 125317 125622 . - 0 ID=cds-WP_001284251.1;Parent=gene-CCO57_RS13110;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=CCO57_RS13110;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 125622 126542 . - . ID=gene-CCO57_RS13115;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=CCO57_RS13115;old_locus_tag=CCO57_13100 NZ_NPMC01000007.1 Protein Homology CDS 125622 126542 . - 0 ID=cds-WP_000420603.1;Parent=gene-CCO57_RS13115;Dbxref=GenBank:WP_000420603.1;Name=WP_000420603.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=CCO57_RS13115;product=curved DNA-binding protein;protein_id=WP_000420603.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 126778 127140 . + . ID=gene-CCO57_RS13125;Name=CCO57_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13125;old_locus_tag=CCO57_13110 NZ_NPMC01000007.1 Protein Homology CDS 126778 127140 . + 0 ID=cds-WP_001118902.1;Parent=gene-CCO57_RS13125;Dbxref=GenBank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=CCO57_RS13125;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 127189 129075 . + . ID=gene-CCO57_RS13130;Name=CCO57_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13130;old_locus_tag=CCO57_13115 NZ_NPMC01000007.1 Protein Homology CDS 127189 129075 . + 0 ID=cds-WP_023213186.1;Parent=gene-CCO57_RS13130;Dbxref=GenBank:WP_023213186.1;Name=WP_023213186.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=CCO57_RS13130;product=protein-disulfide reductase DsbD family protein;protein_id=WP_023213186.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 129072 129695 . + . ID=gene-CCO57_RS13135;Name=CCO57_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13135;old_locus_tag=CCO57_13120 NZ_NPMC01000007.1 Protein Homology CDS 129072 129695 . + 0 ID=cds-WP_000876686.1;Parent=gene-CCO57_RS13135;Dbxref=GenBank:WP_000876686.1;Name=WP_000876686.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=CCO57_RS13135;product=DsbA family protein;protein_id=WP_000876686.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 129685 130191 . + . ID=gene-CCO57_RS13140;Name=CCO57_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13140;old_locus_tag=CCO57_13125 NZ_NPMC01000007.1 Protein Homology CDS 129685 130191 . + 0 ID=cds-WP_024797598.1;Parent=gene-CCO57_RS13140;Dbxref=GenBank:WP_024797598.1;Name=WP_024797598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=CCO57_RS13140;product=protein disulfide oxidoreductase;protein_id=WP_024797598.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 130324 131565 . + . ID=gene-CCO57_RS13145;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=CCO57_RS13145;old_locus_tag=CCO57_13130 NZ_NPMC01000007.1 Protein Homology CDS 130324 131565 . + 0 ID=cds-WP_000749199.1;Parent=gene-CCO57_RS13145;Dbxref=GenBank:WP_000749199.1;Name=WP_000749199.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=CCO57_RS13145;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000749199.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 131599 131826 . - . ID=gene-CCO57_RS13150;Name=CCO57_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13150;old_locus_tag=CCO57_13135 NZ_NPMC01000007.1 Protein Homology CDS 131599 131826 . - 0 ID=cds-WP_001143125.1;Parent=gene-CCO57_RS13150;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=CCO57_RS13150;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 131847 132443 . - . ID=gene-CCO57_RS13155;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=CCO57_RS13155;old_locus_tag=CCO57_13140 NZ_NPMC01000007.1 Protein Homology CDS 131847 132443 . - 0 ID=cds-WP_001062898.1;Parent=gene-CCO57_RS13155;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=CCO57_RS13155;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 132828 132995 . + . ID=gene-CCO57_RS13165;Name=CCO57_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13165;old_locus_tag=CCO57_13150 NZ_NPMC01000007.1 Protein Homology CDS 132828 132995 . + 0 ID=cds-WP_001273663.1;Parent=gene-CCO57_RS13165;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=CCO57_RS13165;product=general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 133132 133770 . + . ID=gene-CCO57_RS13170;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=CCO57_RS13170;old_locus_tag=CCO57_13155 NZ_NPMC01000007.1 Protein Homology CDS 133132 133770 . + 0 ID=cds-WP_000083128.1;Parent=gene-CCO57_RS13170;Dbxref=GenBank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=CCO57_RS13170;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 133767 134162 . - . ID=gene-CCO57_RS13175;Name=CCO57_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13175;old_locus_tag=CCO57_13160 NZ_NPMC01000007.1 Protein Homology CDS 133767 134162 . - 0 ID=cds-WP_000821064.1;Parent=gene-CCO57_RS13175;Dbxref=GenBank:WP_000821064.1;Name=WP_000821064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=CCO57_RS13175;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821064.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 134221 138183 . - . ID=gene-CCO57_RS13180;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=CCO57_RS13180;old_locus_tag=CCO57_13165 NZ_NPMC01000007.1 Protein Homology CDS 134221 138183 . - 0 ID=cds-WP_031565223.1;Parent=gene-CCO57_RS13180;Dbxref=GenBank:WP_031565223.1;Name=WP_031565223.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=CCO57_RS13180;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_031565223.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 138605 140113 . + . ID=gene-CCO57_RS13190;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CCO57_RS13190;old_locus_tag=CCO57_13175 NZ_NPMC01000007.1 Protein Homology CDS 138605 140113 . + 0 ID=cds-WP_001018463.1;Parent=gene-CCO57_RS13190;Dbxref=GenBank:WP_001018463.1;Name=WP_001018463.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=CCO57_RS13190;product=sodium/proline symporter PutP;protein_id=WP_001018463.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 141006 141794 . + . ID=gene-CCO57_RS13195;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=CCO57_RS13195;old_locus_tag=CCO57_13180 NZ_NPMC01000007.1 Protein Homology CDS 141006 141794 . + 0 ID=cds-WP_000533527.1;Parent=gene-CCO57_RS13195;Dbxref=GenBank:WP_000533527.1;Name=WP_000533527.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=CCO57_RS13195;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533527.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 141900 142781 . - . ID=gene-CCO57_RS13200;Name=CCO57_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13200;old_locus_tag=CCO57_13185 NZ_NPMC01000007.1 Protein Homology CDS 141900 142781 . - 0 ID=cds-WP_000433674.1;Parent=gene-CCO57_RS13200;Dbxref=GenBank:WP_000433674.1;Name=WP_000433674.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=CCO57_RS13200;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433674.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 143067 144563 . - . ID=gene-CCO57_RS13205;Name=CCO57_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13205;old_locus_tag=CCO57_13190 NZ_NPMC01000007.1 Protein Homology CDS 143067 144563 . - 0 ID=cds-WP_000628085.1;Parent=gene-CCO57_RS13205;Dbxref=GenBank:WP_000628085.1;Name=WP_000628085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=CCO57_RS13205;product=sodium:solute symporter;protein_id=WP_000628085.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 144900 145580 . - . ID=gene-CCO57_RS13215;Name=CCO57_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13215;old_locus_tag=CCO57_13200 NZ_NPMC01000007.1 Protein Homology CDS 144900 145580 . - 0 ID=cds-WP_000054242.1;Parent=gene-CCO57_RS13215;Dbxref=GenBank:WP_000054242.1;Name=WP_000054242.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=CCO57_RS13215;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054242.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 146086 147240 . + . ID=gene-CCO57_RS13220;Name=CCO57_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13220;old_locus_tag=CCO57_13205 NZ_NPMC01000007.1 Protein Homology CDS 146086 147240 . + 0 ID=cds-WP_001643958.1;Parent=gene-CCO57_RS13220;Dbxref=GenBank:WP_001643958.1;Name=WP_001643958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=CCO57_RS13220;product=N-acetylneuraminate epimerase;protein_id=WP_001643958.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 147285 147977 . + . ID=gene-CCO57_RS13225;Name=CCO57_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13225;old_locus_tag=CCO57_13210 NZ_NPMC01000007.1 Protein Homology CDS 147285 147977 . + 0 ID=cds-WP_000700859.1;Parent=gene-CCO57_RS13225;Dbxref=GenBank:WP_000700859.1;Name=WP_000700859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=CCO57_RS13225;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000700859.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 148260 149540 . + . ID=gene-CCO57_RS13230;Name=CCO57_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13230;old_locus_tag=CCO57_13215 NZ_NPMC01000007.1 Protein Homology CDS 148260 149540 . + 0 ID=cds-WP_000560755.1;Parent=gene-CCO57_RS13230;Dbxref=GenBank:WP_000560755.1;Name=WP_000560755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=CCO57_RS13230;product=MFS transporter;protein_id=WP_000560755.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 149551 150657 . + . ID=gene-CCO57_RS13235;Name=CCO57_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13235;old_locus_tag=CCO57_13220 NZ_NPMC01000007.1 Protein Homology CDS 149551 150657 . + 0 ID=cds-WP_000988594.1;Parent=gene-CCO57_RS13235;Dbxref=GenBank:WP_000988594.1;Name=WP_000988594.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=CCO57_RS13235;product=Gfo/Idh/MocA family protein;protein_id=WP_000988594.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 150809 150896 . - . ID=gene-CCO57_RS13240;Name=CCO57_RS13240;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS13240;old_locus_tag=CCO57_13225 NZ_NPMC01000007.1 tRNAscan-SE tRNA 150809 150896 . - . ID=rna-CCO57_RS13240;Parent=gene-CCO57_RS13240;anticodon=(pos:complement(150860..150862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS13240;product=tRNA-Ser NZ_NPMC01000007.1 tRNAscan-SE exon 150809 150896 . - . ID=exon-CCO57_RS13240-1;Parent=rna-CCO57_RS13240;anticodon=(pos:complement(150860..150862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS13240;product=tRNA-Ser NZ_NPMC01000007.1 RefSeq gene 151132 152070 . + . ID=gene-CCO57_RS13250;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=CCO57_RS13250;old_locus_tag=CCO57_13235 NZ_NPMC01000007.1 Protein Homology CDS 151132 152070 . + 0 ID=cds-WP_000402552.1;Parent=gene-CCO57_RS13250;Dbxref=GenBank:WP_000402552.1;Name=WP_000402552.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=CCO57_RS13250;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402552.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 152155 152892 . + . ID=gene-CCO57_RS13255;Name=CCO57_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13255;old_locus_tag=CCO57_13240 NZ_NPMC01000007.1 Protein Homology CDS 152155 152892 . + 0 ID=cds-WP_000283646.1;Parent=gene-CCO57_RS13255;Dbxref=GenBank:WP_000283646.1;Name=WP_000283646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=CCO57_RS13255;product=phosphatase;protein_id=WP_000283646.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 152916 153470 . + . ID=gene-CCO57_RS13260;Name=CCO57_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13260;old_locus_tag=CCO57_13245 NZ_NPMC01000007.1 Protein Homology CDS 152916 153470 . + 0 ID=cds-WP_079982644.1;Parent=gene-CCO57_RS13260;Dbxref=GenBank:WP_079982644.1;Name=WP_079982644.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=CCO57_RS13260;product=TorD/DmsD family molecular chaperone;protein_id=WP_079982644.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 153571 154053 . + . ID=gene-CCO57_RS13265;Name=CCO57_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13265;old_locus_tag=CCO57_13250 NZ_NPMC01000007.1 Protein Homology CDS 153571 154053 . + 0 ID=cds-WP_001546652.1;Parent=gene-CCO57_RS13265;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=CCO57_RS13265;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 154092 154925 . - . ID=gene-CCO57_RS13270;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=CCO57_RS13270;old_locus_tag=CCO57_13255 NZ_NPMC01000007.1 Protein Homology CDS 154092 154925 . - 0 ID=cds-WP_001137620.1;Parent=gene-CCO57_RS13270;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=CCO57_RS13270;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 154952 155368 . - . ID=gene-CCO57_RS13275;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=CCO57_RS13275;old_locus_tag=CCO57_13260 NZ_NPMC01000007.1 Protein Homology CDS 154952 155368 . - 0 ID=cds-WP_001264072.1;Parent=gene-CCO57_RS13275;Dbxref=GenBank:WP_001264072.1;Name=WP_001264072.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=CCO57_RS13275;product=curli production assembly/transport protein CsgF;protein_id=WP_001264072.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 155395 155790 . - . ID=gene-CCO57_RS13280;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=CCO57_RS13280;old_locus_tag=CCO57_13265 NZ_NPMC01000007.1 Protein Homology CDS 155395 155790 . - 0 ID=cds-WP_000833307.1;Parent=gene-CCO57_RS13280;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=CCO57_RS13280;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 155795 156445 . - . ID=gene-CCO57_RS13285;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=CCO57_RS13285;old_locus_tag=CCO57_13270 NZ_NPMC01000007.1 Protein Homology CDS 155795 156445 . - 0 ID=cds-WP_000481517.1;Parent=gene-CCO57_RS13285;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=CCO57_RS13285;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 157200 157655 . + . ID=gene-CCO57_RS13295;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=CCO57_RS13295;old_locus_tag=CCO57_13280 NZ_NPMC01000007.1 Protein Homology CDS 157200 157655 . + 0 ID=cds-WP_000791656.1;Parent=gene-CCO57_RS13295;Dbxref=GenBank:WP_000791656.1;Name=WP_000791656.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=CCO57_RS13295;product=curli minor subunit CsgB;protein_id=WP_000791656.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 157697 158152 . + . ID=gene-CCO57_RS13300;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=CCO57_RS13300;old_locus_tag=CCO57_13285 NZ_NPMC01000007.1 Protein Homology CDS 157697 158152 . + 0 ID=cds-WP_000771416.1;Parent=gene-CCO57_RS13300;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=CCO57_RS13300;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 158214 158540 . + . ID=gene-CCO57_RS13305;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=CCO57_RS13305;old_locus_tag=CCO57_13290 NZ_NPMC01000007.1 Protein Homology CDS 158214 158540 . + 0 ID=cds-WP_000557256.1;Parent=gene-CCO57_RS13305;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=CCO57_RS13305;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 158671 158991 . + . ID=gene-CCO57_RS13310;Name=CCO57_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13310;old_locus_tag=CCO57_13295 NZ_NPMC01000007.1 Protein Homology CDS 158671 158991 . + 0 ID=cds-WP_000111254.1;Parent=gene-CCO57_RS13310;Dbxref=GenBank:WP_000111254.1;Name=WP_000111254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=CCO57_RS13310;product=type 1 fimbrial protein;protein_id=WP_000111254.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 159077 159616 . + . ID=gene-CCO57_RS13315;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=CCO57_RS13315;old_locus_tag=CCO57_13300 NZ_NPMC01000007.1 Protein Homology CDS 159077 159616 . + 0 ID=cds-WP_000203941.1;Parent=gene-CCO57_RS13315;Dbxref=GenBank:WP_000203941.1;Name=WP_000203941.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=CCO57_RS13315;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203941.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 159552 161039 . + . ID=gene-CCO57_RS13320;Name=CCO57_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13320;old_locus_tag=CCO57_13305 NZ_NPMC01000007.1 Protein Homology CDS 159552 161039 . + 0 ID=cds-WP_048654734.1;Parent=gene-CCO57_RS13320;Dbxref=GenBank:WP_048654734.1;Name=WP_048654734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=CCO57_RS13320;product=phospholipase D family protein;protein_id=WP_048654734.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 161056 162210 . - . ID=gene-CCO57_RS13325;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=CCO57_RS13325;old_locus_tag=CCO57_13310 NZ_NPMC01000007.1 Protein Homology CDS 161056 162210 . - 0 ID=cds-WP_023195835.1;Parent=gene-CCO57_RS13325;Dbxref=GenBank:WP_023195835.1;Name=WP_023195835.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=CCO57_RS13325;product=glucans biosynthesis protein MdoC;protein_id=WP_023195835.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 162482 164017 . + . ID=gene-CCO57_RS13330;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=CCO57_RS13330;old_locus_tag=CCO57_13315 NZ_NPMC01000007.1 Protein Homology CDS 162482 164017 . + 0 ID=cds-WP_001562609.1;Parent=gene-CCO57_RS13330;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=CCO57_RS13330;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 164010 166553 . + . ID=gene-CCO57_RS13335;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=CCO57_RS13335;old_locus_tag=CCO57_13320 NZ_NPMC01000007.1 Protein Homology CDS 164010 166553 . + 0 ID=cds-WP_094914977.1;Parent=gene-CCO57_RS13335;Dbxref=GenBank:WP_094914977.1;Name=WP_094914977.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=CCO57_RS13335;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_094914977.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 166627 166854 . + . ID=gene-CCO57_RS13340;Name=CCO57_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13340;old_locus_tag=CCO57_13325 NZ_NPMC01000007.1 Protein Homology CDS 166627 166854 . + 0 ID=cds-WP_001217832.1;Parent=gene-CCO57_RS13340;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=CCO57_RS13340;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 166855 167229 . - . ID=gene-CCO57_RS13345;Name=CCO57_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13345;old_locus_tag=CCO57_13330 NZ_NPMC01000007.1 Protein Homology CDS 166855 167229 . - 0 ID=cds-WP_000180050.1;Parent=gene-CCO57_RS13345;Dbxref=GenBank:WP_000180050.1;Name=WP_000180050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=CCO57_RS13345;product=MysB family protein;protein_id=WP_000180050.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 167311 168525 . - . ID=gene-CCO57_RS13350;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=CCO57_RS13350;old_locus_tag=CCO57_13335 NZ_NPMC01000007.1 Protein Homology CDS 167311 168525 . - 0 ID=cds-WP_000075053.1;Parent=gene-CCO57_RS13350;Dbxref=GenBank:WP_000075053.1;Name=WP_000075053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=CCO57_RS13350;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000075053.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 168680 169600 . - . ID=gene-CCO57_RS13360;Name=CCO57_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13360;old_locus_tag=CCO57_13345 NZ_NPMC01000007.1 Protein Homology CDS 168680 169600 . - 0 ID=cds-WP_000163973.1;Parent=gene-CCO57_RS13360;Dbxref=GenBank:WP_000163973.1;Name=WP_000163973.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=CCO57_RS13360;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163973.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 169820 170872 . + . ID=gene-CCO57_RS13365;Name=CCO57_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13365;old_locus_tag=CCO57_13350 NZ_NPMC01000007.1 Protein Homology CDS 169820 170872 . + 0 ID=cds-WP_001144629.1;Parent=gene-CCO57_RS13365;Dbxref=GenBank:WP_001144629.1;Name=WP_001144629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=CCO57_RS13365;product=rhodanese-related sulfurtransferase;protein_id=WP_001144629.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 170924 171499 . - . ID=gene-CCO57_RS13370;Name=CCO57_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13370;old_locus_tag=CCO57_13355 NZ_NPMC01000007.1 Protein Homology CDS 170924 171499 . - 0 ID=cds-WP_000739886.1;Parent=gene-CCO57_RS13370;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=CCO57_RS13370;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 171496 172068 . - . ID=gene-CCO57_RS13375;Name=CCO57_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13375;old_locus_tag=CCO57_13360 NZ_NPMC01000007.1 Protein Homology CDS 171496 172068 . - 0 ID=cds-WP_001159784.1;Parent=gene-CCO57_RS13375;Dbxref=GenBank:WP_001159784.1;Name=WP_001159784.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=CCO57_RS13375;product=cytochrome b;protein_id=WP_001159784.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 172330 172443 . - . ID=gene-CCO57_RS13385;Name=CCO57_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13385;old_locus_tag=CCO57_13370 NZ_NPMC01000007.1 Protein Homology CDS 172330 172443 . - 0 ID=cds-WP_001253282.1;Parent=gene-CCO57_RS13385;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=CCO57_RS13385;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 172484 173602 . - . ID=gene-CCO57_RS13390;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=CCO57_RS13390;old_locus_tag=CCO57_13375 NZ_NPMC01000007.1 Protein Homology CDS 172484 173602 . - 0 ID=cds-WP_094914978.1;Parent=gene-CCO57_RS13390;Dbxref=GenBank:WP_094914978.1;Name=WP_094914978.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=CCO57_RS13390;product=N-methyl-L-tryptophan oxidase;protein_id=WP_094914978.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 173715 173969 . - . ID=gene-CCO57_RS13395;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=CCO57_RS13395;old_locus_tag=CCO57_13380 NZ_NPMC01000007.1 Protein Homology CDS 173715 173969 . - 0 ID=cds-WP_000414441.1;Parent=gene-CCO57_RS13395;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=CCO57_RS13395;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 174259 174504 . - . ID=gene-CCO57_RS13400;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=CCO57_RS13400;old_locus_tag=CCO57_13385 NZ_NPMC01000007.1 Protein Homology CDS 174259 174504 . - 0 ID=cds-WP_001217764.1;Parent=gene-CCO57_RS13400;Dbxref=GenBank:WP_001217764.1;Name=WP_001217764.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=CCO57_RS13400;product=DNA damage-inducible protein I;protein_id=WP_001217764.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 174578 175624 . - . ID=gene-CCO57_RS13405;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CCO57_RS13405;old_locus_tag=CCO57_13390 NZ_NPMC01000007.1 Protein Homology CDS 174578 175624 . - 0 ID=cds-WP_086776401.1;Parent=gene-CCO57_RS13405;Dbxref=GenBank:WP_086776401.1;Name=WP_086776401.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=CCO57_RS13405;product=dihydroorotase;protein_id=WP_086776401.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 175727 176287 . - . ID=gene-CCO57_RS13410;Name=CCO57_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13410;old_locus_tag=CCO57_13395 NZ_NPMC01000007.1 Protein Homology CDS 175727 176287 . - 0 ID=cds-WP_000713057.1;Parent=gene-CCO57_RS13410;Dbxref=GenBank:WP_000713057.1;Name=WP_000713057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=CCO57_RS13410;product=lipoprotein;protein_id=WP_000713057.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 176412 177059 . - . ID=gene-CCO57_RS13415;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=CCO57_RS13415;old_locus_tag=CCO57_13400 NZ_NPMC01000007.1 Protein Homology CDS 176412 177059 . - 0 ID=cds-WP_000780893.1;Parent=gene-CCO57_RS13415;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=CCO57_RS13415;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 177123 178331 . - . ID=gene-CCO57_RS13420;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=CCO57_RS13420;old_locus_tag=CCO57_13405 NZ_NPMC01000007.1 Protein Homology CDS 177123 178331 . - 0 ID=cds-WP_000092174.1;Parent=gene-CCO57_RS13420;Dbxref=GenBank:WP_000092174.1;Name=WP_000092174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=CCO57_RS13420;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092174.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 178568 179152 . + . ID=gene-CCO57_RS13425;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=CCO57_RS13425;old_locus_tag=CCO57_13410 NZ_NPMC01000007.1 Protein Homology CDS 178568 179152 . + 0 ID=cds-WP_000468204.1;Parent=gene-CCO57_RS13425;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=CCO57_RS13425;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 179188 179835 . + . ID=gene-CCO57_RS13430;Name=CCO57_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13430;old_locus_tag=CCO57_13415 NZ_NPMC01000007.1 Protein Homology CDS 179188 179835 . + 0 ID=cds-WP_000873047.1;Parent=gene-CCO57_RS13430;Dbxref=GenBank:WP_000873047.1;Name=WP_000873047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=CCO57_RS13430;product=YceH family protein;protein_id=WP_000873047.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 179837 180760 . + . ID=gene-CCO57_RS13435;Name=CCO57_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13435;old_locus_tag=CCO57_13420 NZ_NPMC01000007.1 Protein Homology CDS 179837 180760 . + 0 ID=cds-WP_023217141.1;Parent=gene-CCO57_RS13435;Dbxref=GenBank:WP_023217141.1;Name=WP_023217141.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=CCO57_RS13435;product=Gfo/Idh/MocA family protein;protein_id=WP_023217141.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 181064 182599 . + . ID=gene-CCO57_RS13440;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=CCO57_RS13440;old_locus_tag=CCO57_13425 NZ_NPMC01000007.1 Protein Homology CDS 181064 182599 . + 0 ID=cds-WP_001537775.1;Parent=gene-CCO57_RS13440;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=CCO57_RS13440;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 182681 183103 . - . ID=gene-CCO57_RS13445;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=CCO57_RS13445;old_locus_tag=CCO57_13430 NZ_NPMC01000007.1 Protein Homology CDS 182681 183103 . - 0 ID=cds-WP_000197547.1;Parent=gene-CCO57_RS13445;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=CCO57_RS13445;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 183108 183401 . - . ID=gene-CCO57_RS13450;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=CCO57_RS13450;old_locus_tag=CCO57_13435 NZ_NPMC01000007.1 Protein Homology CDS 183108 183401 . - 0 ID=cds-WP_000020893.1;Parent=gene-CCO57_RS13450;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=CCO57_RS13450;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 183493 184152 . - . ID=gene-CCO57_RS13455;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=CCO57_RS13455;old_locus_tag=CCO57_13440 NZ_NPMC01000007.1 Protein Homology CDS 183493 184152 . - 0 ID=cds-WP_001194086.1;Parent=gene-CCO57_RS13455;Dbxref=GenBank:WP_001194086.1;Name=WP_001194086.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=CCO57_RS13455;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194086.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 184309 184725 . + . ID=gene-CCO57_RS13465;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=CCO57_RS13465;old_locus_tag=CCO57_13450 NZ_NPMC01000007.1 Protein Homology CDS 184309 184725 . + 0 ID=cds-WP_000887043.1;Parent=gene-CCO57_RS13465;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=CCO57_RS13465;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 184729 185133 . + . ID=gene-CCO57_RS13470;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=CCO57_RS13470;old_locus_tag=CCO57_13455 NZ_NPMC01000007.1 Protein Homology CDS 184729 185133 . + 0 ID=cds-WP_001196448.1;Parent=gene-CCO57_RS13470;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=CCO57_RS13470;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 185145 185843 . + . ID=gene-CCO57_RS13475;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=CCO57_RS13475;old_locus_tag=CCO57_13460 NZ_NPMC01000007.1 Protein Homology CDS 185145 185843 . + 0 ID=cds-WP_000020450.1;Parent=gene-CCO57_RS13475;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=CCO57_RS13475;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 185870 187081 . + . ID=gene-CCO57_RS13480;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=CCO57_RS13480;old_locus_tag=CCO57_13465 NZ_NPMC01000007.1 Protein Homology CDS 185870 187081 . + 0 ID=cds-WP_024155310.1;Parent=gene-CCO57_RS13480;Dbxref=GenBank:WP_024155310.1;Name=WP_024155310.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=CCO57_RS13480;product=flagellar hook protein FlgE;protein_id=WP_024155310.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 187102 187857 . + . ID=gene-CCO57_RS13485;Name=CCO57_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13485;old_locus_tag=CCO57_13470 NZ_NPMC01000007.1 Protein Homology CDS 187102 187857 . + 0 ID=cds-WP_000349278.1;Parent=gene-CCO57_RS13485;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=CCO57_RS13485;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 187871 188653 . + . ID=gene-CCO57_RS13490;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=CCO57_RS13490;old_locus_tag=CCO57_13475 NZ_NPMC01000007.1 Protein Homology CDS 187871 188653 . + 0 ID=cds-WP_000625851.1;Parent=gene-CCO57_RS13490;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=CCO57_RS13490;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 188707 189405 . + . ID=gene-CCO57_RS13495;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=CCO57_RS13495;old_locus_tag=CCO57_13480 NZ_NPMC01000007.1 Protein Homology CDS 188707 189405 . + 0 ID=cds-WP_001174897.1;Parent=gene-CCO57_RS13495;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=CCO57_RS13495;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 189417 190514 . + . ID=gene-CCO57_RS13500;Name=CCO57_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13500;old_locus_tag=CCO57_13485 NZ_NPMC01000007.1 Protein Homology CDS 189417 190514 . + 0 ID=cds-WP_001518955.1;Parent=gene-CCO57_RS13500;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=CCO57_RS13500;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 190514 191464 . + . ID=gene-CCO57_RS13505;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=CCO57_RS13505;old_locus_tag=CCO57_13490 NZ_NPMC01000007.1 Protein Homology CDS 190514 191464 . + 0 ID=cds-WP_061377417.1;Parent=gene-CCO57_RS13505;Dbxref=GenBank:WP_061377417.1;Name=WP_061377417.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=CCO57_RS13505;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_061377417.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 191529 193190 . + . ID=gene-CCO57_RS13510;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=CCO57_RS13510;old_locus_tag=CCO57_13495 NZ_NPMC01000007.1 Protein Homology CDS 191529 193190 . + 0 ID=cds-WP_000096425.1;Parent=gene-CCO57_RS13510;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=CCO57_RS13510;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 193205 194158 . + . ID=gene-CCO57_RS13515;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=CCO57_RS13515;old_locus_tag=CCO57_13500 NZ_NPMC01000007.1 Protein Homology CDS 193205 194158 . + 0 ID=cds-WP_001223032.1;Parent=gene-CCO57_RS13515;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=CCO57_RS13515;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 194402 197605 . - . ID=gene-CCO57_RS13525;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=CCO57_RS13525;old_locus_tag=CCO57_13510 NZ_NPMC01000007.1 Protein Homology CDS 194402 197605 . - 0 ID=cds-WP_094914980.1;Parent=gene-CCO57_RS13525;Dbxref=GenBank:WP_094914980.1;Name=WP_094914980.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=CCO57_RS13525;product=ribonuclease E;protein_id=WP_094914980.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 198179 199138 . + . ID=gene-CCO57_RS13535;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=CCO57_RS13535;old_locus_tag=CCO57_13520 NZ_NPMC01000007.1 Protein Homology CDS 198179 199138 . + 0 ID=cds-WP_000846319.1;Parent=gene-CCO57_RS13535;Dbxref=GenBank:WP_000846319.1;Name=WP_000846319.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=CCO57_RS13535;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846319.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 199294 200037 . + . ID=gene-CCO57_RS13540;Name=CCO57_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13540;old_locus_tag=CCO57_13525 NZ_NPMC01000007.1 Protein Homology CDS 199294 200037 . + 0 ID=cds-WP_094914994.1;Parent=gene-CCO57_RS13540;Dbxref=GenBank:WP_094914994.1;Name=WP_094914994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=CCO57_RS13540;product=DUF3053 domain-containing protein;protein_id=WP_094914994.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 200240 200464 . + . ID=gene-CCO57_RS13545;Name=CCO57_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13545;old_locus_tag=CCO57_13530 NZ_NPMC01000007.1 GeneMarkS-2+ CDS 200240 200464 . + 0 ID=cds-WP_000528430.1;Parent=gene-CCO57_RS13545;Dbxref=GenBank:WP_000528430.1;Name=WP_000528430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS13545;product=hypothetical protein;protein_id=WP_000528430.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 200535 201119 . - . ID=gene-CCO57_RS13550;Name=CCO57_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13550;old_locus_tag=CCO57_13535 NZ_NPMC01000007.1 Protein Homology CDS 200535 201119 . - 0 ID=cds-WP_001137604.1;Parent=gene-CCO57_RS13550;Dbxref=GenBank:WP_001137604.1;Name=WP_001137604.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=CCO57_RS13550;product=Maf family protein;protein_id=WP_001137604.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 201317 201838 . + . ID=gene-CCO57_RS13555;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=CCO57_RS13555;old_locus_tag=CCO57_13540 NZ_NPMC01000007.1 Protein Homology CDS 201317 201838 . + 0 ID=cds-WP_001174492.1;Parent=gene-CCO57_RS13555;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=CCO57_RS13555;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 201890 202063 . + . ID=gene-CCO57_RS13560;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CCO57_RS13560;old_locus_tag=CCO57_13545 NZ_NPMC01000007.1 Protein Homology CDS 201890 202063 . + 0 ID=cds-WP_000290727.1;Parent=gene-CCO57_RS13560;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=CCO57_RS13560;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 202197 203276 . + . ID=gene-CCO57_RS13565;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CCO57_RS13565;old_locus_tag=CCO57_13550 NZ_NPMC01000007.1 Protein Homology CDS 202197 203276 . + 0 ID=cds-WP_001518286.1;Parent=gene-CCO57_RS13565;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=CCO57_RS13565;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 203356 204309 . + . ID=gene-CCO57_RS13570;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=CCO57_RS13570;old_locus_tag=CCO57_13555 NZ_NPMC01000007.1 Protein Homology CDS 203356 204309 . + 0 ID=cds-WP_000288148.1;Parent=gene-CCO57_RS13570;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=CCO57_RS13570;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 204325 205254 . + . ID=gene-CCO57_RS13575;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CCO57_RS13575;old_locus_tag=CCO57_13560 NZ_NPMC01000007.1 Protein Homology CDS 204325 205254 . + 0 ID=cds-WP_000191343.1;Parent=gene-CCO57_RS13575;Dbxref=GenBank:WP_000191343.1;Name=WP_000191343.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=CCO57_RS13575;product=ACP S-malonyltransferase;protein_id=WP_000191343.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 205267 206001 . + . ID=gene-CCO57_RS13580;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CCO57_RS13580;old_locus_tag=CCO57_13565 NZ_NPMC01000007.1 Protein Homology CDS 205267 206001 . + 0 ID=cds-WP_000007236.1;Parent=gene-CCO57_RS13580;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=CCO57_RS13580;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 206157 206393 . + . ID=gene-CCO57_RS13585;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=CCO57_RS13585;old_locus_tag=CCO57_13570 NZ_NPMC01000007.1 Protein Homology CDS 206157 206393 . + 0 ID=cds-WP_000103754.1;Parent=gene-CCO57_RS13585;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=CCO57_RS13585;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 206479 207720 . + . ID=gene-CCO57_RS13590;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CCO57_RS13590;old_locus_tag=CCO57_13575 NZ_NPMC01000007.1 Protein Homology CDS 206479 207720 . + 0 ID=cds-WP_000044666.1;Parent=gene-CCO57_RS13590;Dbxref=GenBank:WP_000044666.1;Name=WP_000044666.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=CCO57_RS13590;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044666.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 207791 208315 . - . ID=gene-CCO57_RS13595;Name=CCO57_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13595;old_locus_tag=CCO57_13580 NZ_NPMC01000007.1 Protein Homology CDS 207791 208315 . - 0 ID=cds-WP_000068580.1;Parent=gene-CCO57_RS13595;Dbxref=GenBank:WP_000068580.1;Name=WP_000068580.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068580.1;locus_tag=CCO57_RS13595;product=fimbrial protein;protein_id=WP_000068580.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 208330 208851 . - . ID=gene-CCO57_RS13600;Name=CCO57_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13600;old_locus_tag=CCO57_13585 NZ_NPMC01000007.1 Protein Homology CDS 208330 208851 . - 0 ID=cds-WP_012513009.1;Parent=gene-CCO57_RS13600;Dbxref=GenBank:WP_012513009.1;Name=WP_012513009.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012513009.1;locus_tag=CCO57_RS13600;product=fimbrial protein;protein_id=WP_012513009.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 208864 209862 . - . ID=gene-CCO57_RS13605;Name=CCO57_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13605;old_locus_tag=CCO57_13590 NZ_NPMC01000007.1 Protein Homology CDS 208864 209862 . - 0 ID=cds-WP_000754357.1;Parent=gene-CCO57_RS13605;Dbxref=GenBank:WP_000754357.1;Name=WP_000754357.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754357.1;locus_tag=CCO57_RS13605;product=fimbrial protein;protein_id=WP_000754357.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 209900 212455 . - . ID=gene-CCO57_RS13610;Name=CCO57_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13610;old_locus_tag=CCO57_13595 NZ_NPMC01000007.1 Protein Homology CDS 209900 212455 . - 0 ID=cds-WP_023213204.1;Parent=gene-CCO57_RS13610;Dbxref=GenBank:WP_023213204.1;Name=WP_023213204.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990584.1;locus_tag=CCO57_RS13610;product=fimbria/pilus outer membrane usher protein;protein_id=WP_023213204.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 212479 213156 . - . ID=gene-CCO57_RS13615;Name=CCO57_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13615;old_locus_tag=CCO57_13600 NZ_NPMC01000007.1 Protein Homology CDS 212479 213156 . - 0 ID=cds-WP_023213205.1;Parent=gene-CCO57_RS13615;Dbxref=GenBank:WP_023213205.1;Name=WP_023213205.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046428.1;locus_tag=CCO57_RS13615;product=fimbrial biogenesis chaperone;protein_id=WP_023213205.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 213232 213774 . - . ID=gene-CCO57_RS13620;Name=CCO57_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13620;old_locus_tag=CCO57_13605 NZ_NPMC01000007.1 Protein Homology CDS 213232 213774 . - 0 ID=cds-WP_023136614.1;Parent=gene-CCO57_RS13620;Dbxref=GenBank:WP_023136614.1;Name=WP_023136614.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405985.1;locus_tag=CCO57_RS13620;product=fimbrial protein;protein_id=WP_023136614.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 214189 214998 . + . ID=gene-CCO57_RS13625;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=CCO57_RS13625;old_locus_tag=CCO57_13610 NZ_NPMC01000007.1 Protein Homology CDS 214189 214998 . + 0 ID=cds-WP_023213207.1;Parent=gene-CCO57_RS13625;Dbxref=GenBank:WP_023213207.1;Name=WP_023213207.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=CCO57_RS13625;product=aminodeoxychorismate lyase;protein_id=WP_023213207.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 215001 216023 . + . ID=gene-CCO57_RS13630;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=CCO57_RS13630;old_locus_tag=CCO57_13615 NZ_NPMC01000007.1 Protein Homology CDS 215001 216023 . + 0 ID=cds-WP_094914981.1;Parent=gene-CCO57_RS13630;Dbxref=GenBank:WP_094914981.1;Name=WP_094914981.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=CCO57_RS13630;product=cell division protein YceG;protein_id=WP_094914981.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 216013 216654 . + . ID=gene-CCO57_RS13635;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CCO57_RS13635;old_locus_tag=CCO57_13620 NZ_NPMC01000007.1 Protein Homology CDS 216013 216654 . + 0 ID=cds-WP_000535399.1;Parent=gene-CCO57_RS13635;Dbxref=GenBank:WP_000535399.1;Name=WP_000535399.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=CCO57_RS13635;product=dTMP kinase;protein_id=WP_000535399.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 216651 217655 . + . ID=gene-CCO57_RS13640;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=CCO57_RS13640;old_locus_tag=CCO57_13625 NZ_NPMC01000007.1 Protein Homology CDS 216651 217655 . + 0 ID=cds-WP_069721436.1;Parent=gene-CCO57_RS13640;Dbxref=GenBank:WP_069721436.1;Name=WP_069721436.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=CCO57_RS13640;product=DNA polymerase III subunit delta';protein_id=WP_069721436.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 217666 218463 . + . ID=gene-CCO57_RS13645;Name=CCO57_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13645;old_locus_tag=CCO57_13630 NZ_NPMC01000007.1 Protein Homology CDS 217666 218463 . + 0 ID=cds-WP_094914982.1;Parent=gene-CCO57_RS13645;Dbxref=GenBank:WP_094914982.1;Name=WP_094914982.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=CCO57_RS13645;product=metal-dependent hydrolase;protein_id=WP_094914982.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 218758 220191 . + . ID=gene-CCO57_RS13650;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CCO57_RS13650;old_locus_tag=CCO57_13635 NZ_NPMC01000007.1 Protein Homology CDS 218758 220191 . + 0 ID=cds-WP_000475705.1;Parent=gene-CCO57_RS13650;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=CCO57_RS13650;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 220276 222450 . - . ID=gene-CCO57_RS13655;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=CCO57_RS13655;old_locus_tag=CCO57_13640 NZ_NPMC01000007.1 Protein Homology CDS 220276 222450 . - 0 ID=cds-WP_094888707.1;Parent=gene-CCO57_RS13655;Dbxref=GenBank:WP_094888707.1;Name=WP_094888707.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=CCO57_RS13655;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_094888707.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 222792 223151 . + . ID=gene-CCO57_RS13660;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=CCO57_RS13660;old_locus_tag=CCO57_13645 NZ_NPMC01000007.1 Protein Homology CDS 222792 223151 . + 0 ID=cds-WP_023223200.1;Parent=gene-CCO57_RS13660;Dbxref=GenBank:WP_023223200.1;Name=WP_023223200.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=CCO57_RS13660;product=purine nucleoside phosphoramidase;protein_id=WP_023223200.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 223154 223528 . + . ID=gene-CCO57_RS13665;Name=CCO57_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13665;old_locus_tag=CCO57_13650 NZ_NPMC01000007.1 Protein Homology CDS 223154 223528 . + 0 ID=cds-WP_000589563.1;Parent=gene-CCO57_RS13665;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=CCO57_RS13665;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 223542 224180 . + . ID=gene-CCO57_RS13670;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=CCO57_RS13670;old_locus_tag=CCO57_13655 NZ_NPMC01000007.1 Protein Homology CDS 223542 224180 . + 0 ID=cds-WP_000164359.1;Parent=gene-CCO57_RS13670;Dbxref=GenBank:WP_000164359.1;Name=WP_000164359.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=CCO57_RS13670;product=penicillin-binding protein activator LpoB;protein_id=WP_000164359.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 224161 224985 . + . ID=gene-CCO57_RS13675;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=CCO57_RS13675;old_locus_tag=CCO57_13660 NZ_NPMC01000007.1 Protein Homology CDS 224161 224985 . + 0 ID=cds-WP_079821920.1;Parent=gene-CCO57_RS13675;Dbxref=GenBank:WP_079821920.1;Name=WP_079821920.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=CCO57_RS13675;product=thiamine kinase;protein_id=WP_079821920.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 224996 226021 . + . ID=gene-CCO57_RS13680;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=CCO57_RS13680;old_locus_tag=CCO57_13665 NZ_NPMC01000007.1 Protein Homology CDS 224996 226021 . + 0 ID=cds-WP_000529340.1;Parent=gene-CCO57_RS13680;Dbxref=GenBank:WP_000529340.1;Name=WP_000529340.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=CCO57_RS13680;product=beta-N-acetylhexosaminidase;protein_id=WP_000529340.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 226046 226588 . + . ID=gene-CCO57_RS13685;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=CCO57_RS13685;old_locus_tag=CCO57_13670 NZ_NPMC01000007.1 Protein Homology CDS 226046 226588 . + 0 ID=cds-WP_000587945.1;Parent=gene-CCO57_RS13685;Dbxref=GenBank:WP_000587945.1;Name=WP_000587945.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=CCO57_RS13685;product=alpha/beta hydrolase YcfP;protein_id=WP_000587945.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 226842 228146 . + . ID=gene-CCO57_RS13690;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=CCO57_RS13690;old_locus_tag=CCO57_13675 NZ_NPMC01000007.1 Protein Homology CDS 226842 228146 . + 0 ID=cds-WP_000211053.1;Parent=gene-CCO57_RS13690;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=CCO57_RS13690;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 228325 228864 . + . ID=gene-CCO57_RS13695;Name=CCO57_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13695;old_locus_tag=CCO57_13680 NZ_NPMC01000007.1 Protein Homology CDS 228325 228864 . + 0 ID=cds-WP_001043449.1;Parent=gene-CCO57_RS13695;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=CCO57_RS13695;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 228938 229573 . - . ID=gene-CCO57_RS13700;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=CCO57_RS13700;old_locus_tag=CCO57_13685 NZ_NPMC01000007.1 Protein Homology CDS 228938 229573 . - 0 ID=cds-WP_000205986.1;Parent=gene-CCO57_RS13700;Dbxref=GenBank:WP_000205986.1;Name=WP_000205986.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=CCO57_RS13700;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205986.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 229815 230072 . + . ID=gene-CCO57_RS13705;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=CCO57_RS13705;old_locus_tag=CCO57_13690 NZ_NPMC01000007.1 Protein Homology CDS 229815 230072 . + 0 ID=cds-WP_000789664.1;Parent=gene-CCO57_RS13705;Dbxref=GenBank:WP_000789664.1;Name=WP_000789664.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=CCO57_RS13705;product=multiple stress resistance protein BhsA;protein_id=WP_000789664.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 230169 231134 . - . ID=gene-CCO57_RS13710;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=CCO57_RS13710;old_locus_tag=CCO57_13695 NZ_NPMC01000007.1 Protein Homology CDS 230169 231134 . - 0 ID=cds-WP_000482962.1;Parent=gene-CCO57_RS13710;Dbxref=GenBank:WP_000482962.1;Name=WP_000482962.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=CCO57_RS13710;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482962.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 231282 234728 . - . ID=gene-CCO57_RS13715;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CCO57_RS13715;old_locus_tag=CCO57_13700 NZ_NPMC01000007.1 Protein Homology CDS 231282 234728 . - 0 ID=cds-WP_001114323.1;Parent=gene-CCO57_RS13715;Dbxref=GenBank:WP_001114323.1;Name=WP_001114323.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=CCO57_RS13715;product=transcription-repair coupling factor;protein_id=WP_001114323.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 235066 236265 . + . ID=gene-CCO57_RS13720;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=CCO57_RS13720;old_locus_tag=CCO57_13705 NZ_NPMC01000007.1 Protein Homology CDS 235066 236265 . + 0 ID=cds-WP_001518787.1;Parent=gene-CCO57_RS13720;Dbxref=GenBank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=CCO57_RS13720;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 236258 236959 . + . ID=gene-CCO57_RS13725;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=CCO57_RS13725;old_locus_tag=CCO57_13710 NZ_NPMC01000007.1 Protein Homology CDS 236258 236959 . + 0 ID=cds-WP_001033714.1;Parent=gene-CCO57_RS13725;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=CCO57_RS13725;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 236959 238203 . + . ID=gene-CCO57_RS13730;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=CCO57_RS13730;old_locus_tag=CCO57_13715 NZ_NPMC01000007.1 Protein Homology CDS 236959 238203 . + 0 ID=cds-WP_000168091.1;Parent=gene-CCO57_RS13730;Dbxref=GenBank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=CCO57_RS13730;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 238232 239143 . + . ID=gene-CCO57_RS13735;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=CCO57_RS13735;old_locus_tag=CCO57_13720 NZ_NPMC01000007.1 Protein Homology CDS 238232 239143 . + 0 ID=cds-WP_000291333.1;Parent=gene-CCO57_RS13735;Dbxref=GenBank:WP_000291333.1;Name=WP_000291333.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=CCO57_RS13735;product=N-acetylglucosamine kinase;protein_id=WP_000291333.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 239162 239983 . + . ID=gene-CCO57_RS13740;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=CCO57_RS13740;old_locus_tag=CCO57_13725 NZ_NPMC01000007.1 Protein Homology CDS 239162 239983 . + 0 ID=cds-WP_001191856.1;Parent=gene-CCO57_RS13740;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=CCO57_RS13740;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 240065 241111 . - . ID=gene-CCO57_RS13745;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=CCO57_RS13745;old_locus_tag=CCO57_13730 NZ_NPMC01000007.1 Protein Homology CDS 240065 241111 . - 0 ID=cds-WP_000759329.1;Parent=gene-CCO57_RS13745;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=CCO57_RS13745;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 241136 241915 . - . ID=gene-CCO57_RS13750;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=CCO57_RS13750;old_locus_tag=CCO57_13735 NZ_NPMC01000007.1 Protein Homology CDS 241136 241915 . - 0 ID=cds-WP_000580299.1;Parent=gene-CCO57_RS13750;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=CCO57_RS13750;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 242231 243241 . - . ID=gene-CCO57_RS13755;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=CCO57_RS13755;old_locus_tag=CCO57_13740 NZ_NPMC01000007.1 Protein Homology CDS 242231 243241 . - 0 ID=cds-WP_094914983.1;Parent=gene-CCO57_RS13755;Dbxref=GenBank:WP_094914983.1;Name=WP_094914983.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=CCO57_RS13755;product=SPI-2 type III secretion system effector SifA;protein_id=WP_094914983.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 243570 244433 . - . ID=gene-CCO57_RS13760;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=CCO57_RS13760;old_locus_tag=CCO57_13745 NZ_NPMC01000007.1 Protein Homology CDS 243570 244433 . - 0 ID=cds-WP_000799391.1;Parent=gene-CCO57_RS13760;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=CCO57_RS13760;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 244417 245553 . - . ID=gene-CCO57_RS13765;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=CCO57_RS13765;old_locus_tag=CCO57_13750 NZ_NPMC01000007.1 Protein Homology CDS 244417 245553 . - 0 ID=cds-WP_000531583.1;Parent=gene-CCO57_RS13765;Dbxref=GenBank:WP_000531583.1;Name=WP_000531583.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=CCO57_RS13765;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531583.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 245804 247033 . + . ID=gene-CCO57_RS13775;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CCO57_RS13775;old_locus_tag=CCO57_13760 NZ_NPMC01000007.1 Protein Homology CDS 245804 247033 . + 0 ID=cds-WP_000359410.1;Parent=gene-CCO57_RS13775;Dbxref=GenBank:WP_000359410.1;Name=WP_000359410.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=CCO57_RS13775;product=peptidase T;protein_id=WP_000359410.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 247037 248371 . + . ID=gene-CCO57_RS13780;Name=CCO57_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13780;old_locus_tag=CCO57_13765 NZ_NPMC01000007.1 Protein Homology CDS 247037 248371 . + 0 ID=cds-WP_094914984.1;Parent=gene-CCO57_RS13780;Dbxref=GenBank:WP_094914984.1;Name=WP_094914984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=CCO57_RS13780;product=hypothetical protein;protein_id=WP_094914984.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 248411 249532 . - . ID=gene-CCO57_RS13785;Name=CCO57_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13785;old_locus_tag=CCO57_13770 NZ_NPMC01000007.1 Protein Homology CDS 248411 249532 . - 0 ID=cds-WP_094914985.1;Parent=gene-CCO57_RS13785;Dbxref=GenBank:WP_094914985.1;Name=WP_094914985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=CCO57_RS13785;product=cupin domain-containing protein;protein_id=WP_094914985.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 249613 251076 . - . ID=gene-CCO57_RS13790;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=CCO57_RS13790;old_locus_tag=CCO57_13775 NZ_NPMC01000007.1 Protein Homology CDS 249613 251076 . - 0 ID=cds-WP_001031687.1;Parent=gene-CCO57_RS13790;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=CCO57_RS13790;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 251076 251747 . - . ID=gene-CCO57_RS13795;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=CCO57_RS13795;old_locus_tag=CCO57_13780 NZ_NPMC01000007.1 Protein Homology CDS 251076 251747 . - 0 ID=cds-WP_001537766.1;Parent=gene-CCO57_RS13795;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=CCO57_RS13795;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 251874 253244 . - . ID=gene-CCO57_RS13800;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CCO57_RS13800;old_locus_tag=CCO57_13785 NZ_NPMC01000007.1 Protein Homology CDS 251874 253244 . - 0 ID=cds-WP_000423763.1;Parent=gene-CCO57_RS13800;Dbxref=GenBank:WP_000423763.1;Name=WP_000423763.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=CCO57_RS13800;product=adenylosuccinate lyase;protein_id=WP_000423763.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 253248 253889 . - . ID=gene-CCO57_RS13805;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=CCO57_RS13805;old_locus_tag=CCO57_13790 NZ_NPMC01000007.1 Protein Homology CDS 253248 253889 . - 0 ID=cds-WP_001519653.1;Parent=gene-CCO57_RS13805;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=CCO57_RS13805;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 253976 255082 . - . ID=gene-CCO57_RS13810;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=CCO57_RS13810;old_locus_tag=CCO57_13795 NZ_NPMC01000007.1 Protein Homology CDS 253976 255082 . - 0 ID=cds-WP_000004540.1;Parent=gene-CCO57_RS13810;Dbxref=GenBank:WP_000004540.1;Name=WP_000004540.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=CCO57_RS13810;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000004540.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 255136 255597 . - . ID=gene-CCO57_RS13815;Name=CCO57_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13815;old_locus_tag=CCO57_13800 NZ_NPMC01000007.1 Protein Homology CDS 255136 255597 . - 0 ID=cds-WP_061377423.1;Parent=gene-CCO57_RS13815;Dbxref=GenBank:WP_061377423.1;Name=WP_061377423.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=CCO57_RS13815;product=NUDIX hydrolase;protein_id=WP_061377423.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 255609 255938 . - . ID=gene-CCO57_RS13820;Name=CCO57_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13820;old_locus_tag=CCO57_13805 NZ_NPMC01000007.1 Protein Homology CDS 255609 255938 . - 0 ID=cds-WP_000825956.1;Parent=gene-CCO57_RS13820;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=CCO57_RS13820;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 255935 256600 . - . ID=gene-CCO57_RS13825;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=CCO57_RS13825;old_locus_tag=CCO57_13810 NZ_NPMC01000007.1 Protein Homology CDS 255935 256600 . - 0 ID=cds-WP_001249412.1;Parent=gene-CCO57_RS13825;Dbxref=GenBank:WP_001249412.1;Name=WP_001249412.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=CCO57_RS13825;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249412.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 256772 258022 . + . ID=gene-CCO57_RS13830;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CCO57_RS13830;old_locus_tag=CCO57_13815 NZ_NPMC01000007.1 Protein Homology CDS 256772 258022 . + 0 ID=cds-WP_000444507.1;Parent=gene-CCO57_RS13830;Dbxref=GenBank:WP_000444507.1;Name=WP_000444507.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=CCO57_RS13830;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444507.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 258136 259278 . - . ID=gene-CCO57_RS13835;Name=CCO57_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13835;old_locus_tag=CCO57_13820 NZ_NPMC01000007.1 Protein Homology CDS 258136 259278 . - 0 ID=cds-WP_000741325.1;Parent=gene-CCO57_RS13835;Dbxref=GenBank:WP_000741325.1;Name=WP_000741325.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750633.1;locus_tag=CCO57_RS13835;product=site-specific integrase;protein_id=WP_000741325.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 259268 259504 . - . ID=gene-CCO57_RS13840;Name=CCO57_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13840;old_locus_tag=CCO57_13825 NZ_NPMC01000007.1 Protein Homology CDS 259268 259504 . - 0 ID=cds-WP_000089142.1;Parent=gene-CCO57_RS13840;Dbxref=GenBank:WP_000089142.1;Name=WP_000089142.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309637.1;locus_tag=CCO57_RS13840;product=excisionase;protein_id=WP_000089142.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 259648 260187 . - . ID=gene-CCO57_RS13845;Name=CCO57_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13845;old_locus_tag=CCO57_13830 NZ_NPMC01000007.1 Protein Homology CDS 259648 260187 . - 0 ID=cds-WP_000008350.1;Parent=gene-CCO57_RS13845;Dbxref=GenBank:WP_000008350.1;Name=WP_000008350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120458.1;locus_tag=CCO57_RS13845;product=hypothetical protein;protein_id=WP_000008350.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 260324 261151 . - . ID=gene-CCO57_RS13850;Name=CCO57_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13850;old_locus_tag=CCO57_13835 NZ_NPMC01000007.1 Protein Homology CDS 260324 261151 . - 0 ID=cds-WP_061377732.1;Parent=gene-CCO57_RS13850;Dbxref=GenBank:WP_061377732.1;Name=WP_061377732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080411.1;locus_tag=CCO57_RS13850;product=YfdQ family protein;protein_id=WP_061377732.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 261209 261580 . - . ID=gene-CCO57_RS13855;Name=CCO57_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13855;old_locus_tag=CCO57_13840 NZ_NPMC01000007.1 Protein Homology CDS 261209 261580 . - 0 ID=cds-WP_094914986.1;Parent=gene-CCO57_RS13855;Dbxref=GenBank:WP_094914986.1;Name=WP_094914986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668372.1;locus_tag=CCO57_RS13855;product=hypothetical protein;protein_id=WP_094914986.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 262394 263089 . - . ID=gene-CCO57_RS13865;Name=CCO57_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13865;old_locus_tag=CCO57_13850 NZ_NPMC01000007.1 Protein Homology CDS 262394 263089 . - 0 ID=cds-WP_001020640.1;Parent=gene-CCO57_RS13865;Dbxref=GenBank:WP_001020640.1;Name=WP_001020640.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358750.1;locus_tag=CCO57_RS13865;product=XRE family transcriptional regulator;protein_id=WP_001020640.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 263187 263411 . + . ID=gene-CCO57_RS13875;Name=CCO57_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13875;old_locus_tag=CCO57_13860 NZ_NPMC01000007.1 Protein Homology CDS 263187 263411 . + 0 ID=cds-WP_001191666.1;Parent=gene-CCO57_RS13875;Dbxref=GenBank:WP_001191666.1;Name=WP_001191666.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191959.1;locus_tag=CCO57_RS13875;product=helix-turn-helix domain-containing protein;protein_id=WP_001191666.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 263440 263994 . + . ID=gene-CCO57_RS13880;Name=CCO57_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13880;old_locus_tag=CCO57_13865 NZ_NPMC01000007.1 Protein Homology CDS 263440 263994 . + 0 ID=cds-WP_000509731.1;Parent=gene-CCO57_RS13880;Dbxref=GenBank:WP_000509731.1;Name=WP_000509731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509732.1;locus_tag=CCO57_RS13880;product=YmfL family putative regulatory protein;protein_id=WP_000509731.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 263991 265133 . + . ID=gene-CCO57_RS13885;Name=CCO57_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13885;old_locus_tag=CCO57_13870 NZ_NPMC01000007.1 Protein Homology CDS 263991 265133 . + 0 ID=cds-WP_094914987.1;Parent=gene-CCO57_RS13885;Dbxref=GenBank:WP_094914987.1;Name=WP_094914987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087306.1;locus_tag=CCO57_RS13885;product=Rha family phage regulatory protein;protein_id=WP_094914987.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 265130 265354 . + . ID=gene-CCO57_RS13890;Name=CCO57_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13890;old_locus_tag=CCO57_13875 NZ_NPMC01000007.1 Protein Homology CDS 265130 265354 . + 0 ID=cds-WP_000620702.1;Parent=gene-CCO57_RS13890;Dbxref=GenBank:WP_000620702.1;Name=WP_000620702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401086.1;locus_tag=CCO57_RS13890;product=hypothetical protein;protein_id=WP_000620702.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 265351 266310 . + . ID=gene-CCO57_RS13895;Name=CCO57_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13895;old_locus_tag=CCO57_13880 NZ_NPMC01000007.1 Protein Homology CDS 265351 266310 . + 0 ID=cds-WP_080148175.1;Parent=gene-CCO57_RS13895;Dbxref=GenBank:WP_080148175.1;Name=WP_080148175.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104949.1;locus_tag=CCO57_RS13895;product=helix-turn-helix domain-containing protein;protein_id=WP_080148175.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 266312 266794 . + . ID=gene-CCO57_RS13900;Name=CCO57_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13900;old_locus_tag=CCO57_13885 NZ_NPMC01000007.1 Protein Homology CDS 266312 266794 . + 0 ID=cds-WP_176453484.1;Parent=gene-CCO57_RS13900;Dbxref=GenBank:WP_176453484.1;Name=WP_176453484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531318.1;locus_tag=CCO57_RS13900;product=PerC family transcriptional regulator;protein_id=WP_176453484.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 266794 267672 . + . ID=gene-CCO57_RS13905;Name=CCO57_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13905;old_locus_tag=CCO57_13890 NZ_NPMC01000007.1 Protein Homology CDS 266794 267672 . + 0 ID=cds-WP_094914989.1;Parent=gene-CCO57_RS13905;Dbxref=GenBank:WP_094914989.1;Name=WP_094914989.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762302.1;locus_tag=CCO57_RS13905;product=phage N-6-adenine-methyltransferase;protein_id=WP_094914989.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 267665 269395 . + . ID=gene-CCO57_RS13910;Name=CCO57_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13910;old_locus_tag=CCO57_13895 NZ_NPMC01000007.1 Protein Homology CDS 267665 269395 . + 0 ID=cds-WP_086801748.1;Parent=gene-CCO57_RS13910;Dbxref=GenBank:WP_086801748.1;Name=WP_086801748.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034738.1;locus_tag=CCO57_RS13910;product=DNA cytosine methyltransferase;protein_id=WP_086801748.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 269392 269712 . + . ID=gene-CCO57_RS13915;Name=CCO57_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13915;old_locus_tag=CCO57_13900 NZ_NPMC01000007.1 Protein Homology CDS 269392 269712 . + 0 ID=cds-WP_023252183.1;Parent=gene-CCO57_RS13915;Dbxref=GenBank:WP_023252183.1;Name=WP_023252183.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210157.1;locus_tag=CCO57_RS13915;product=LexA family protein;protein_id=WP_023252183.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 269709 270098 . + . ID=gene-CCO57_RS13920;Name=CCO57_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13920;old_locus_tag=CCO57_13905 NZ_NPMC01000007.1 Protein Homology CDS 269709 270098 . + 0 ID=cds-WP_094914990.1;Parent=gene-CCO57_RS13920;Dbxref=GenBank:WP_094914990.1;Name=WP_094914990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767134.1;locus_tag=CCO57_RS13920;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_094914990.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 270127 270975 . + . ID=gene-CCO57_RS13925;Name=CCO57_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13925;old_locus_tag=CCO57_13910 NZ_NPMC01000007.1 Protein Homology CDS 270127 270975 . + 0 ID=cds-WP_370693458.1;Parent=gene-CCO57_RS13925;Dbxref=GenBank:WP_370693458.1;Name=WP_370693458.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: protein motif:HMM:NF016283.6;locus_tag=CCO57_RS13925;product=KilA-N domain-containing protein;protein_id=WP_370693458.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 270983 271972 . + . ID=gene-CCO57_RS13930;Name=CCO57_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13930;old_locus_tag=CCO57_13915 NZ_NPMC01000007.1 Protein Homology CDS 270983 271972 . + 0 ID=cds-WP_094888745.1;Parent=gene-CCO57_RS13930;Dbxref=GenBank:WP_094888745.1;Name=WP_094888745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461183.1;locus_tag=CCO57_RS13930;product=DUF968 domain-containing protein;protein_id=WP_094888745.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 271986 272738 . + . ID=gene-CCO57_RS13935;Name=CCO57_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13935;old_locus_tag=CCO57_13920 NZ_NPMC01000007.1 Protein Homology CDS 271986 272738 . + 0 ID=cds-WP_076731003.1;Parent=gene-CCO57_RS13935;Dbxref=GenBank:WP_076731003.1;Name=WP_076731003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416077.4;locus_tag=CCO57_RS13935;product=antitermination protein;protein_id=WP_076731003.1;transl_table=11 NZ_NPMC01000007.1 RefSeq pseudogene 272820 273136 . + . ID=gene-CCO57_RS13940;Name=CCO57_RS13940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS13940;old_locus_tag=CCO57_13925;pseudo=true NZ_NPMC01000007.1 Protein Homology CDS 272820 273136 . + 0 ID=cds-CCO57_RS13940;Parent=gene-CCO57_RS13940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284953.1;locus_tag=CCO57_RS13940;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 273417 273605 . + . ID=gene-CCO57_RS13950;Name=CCO57_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13950;old_locus_tag=CCO57_13935 NZ_NPMC01000007.1 Protein Homology CDS 273417 273605 . + 0 ID=cds-WP_023221874.1;Parent=gene-CCO57_RS13950;Dbxref=GenBank:WP_023221874.1;Name=WP_023221874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000657897.1;locus_tag=CCO57_RS13950;product=hypothetical protein;protein_id=WP_023221874.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 273839 274525 . - . ID=gene-CCO57_RS13955;Name=gtgA;gbkey=Gene;gene=gtgA;gene_biotype=protein_coding;locus_tag=CCO57_RS13955;old_locus_tag=CCO57_13940 NZ_NPMC01000007.1 Protein Homology CDS 273839 274525 . - 0 ID=cds-WP_001110788.1;Parent=gene-CCO57_RS13955;Dbxref=GenBank:WP_001110788.1;Name=WP_001110788.1;gbkey=CDS;gene=gtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461550.1;locus_tag=CCO57_RS13955;product=type III secretion system effector protease GtgA;protein_id=WP_001110788.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 274801 275130 . + . ID=gene-CCO57_RS13960;Name=CCO57_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13960;old_locus_tag=CCO57_13945 NZ_NPMC01000007.1 Protein Homology CDS 274801 275130 . + 0 ID=cds-WP_001574216.1;Parent=gene-CCO57_RS13960;Dbxref=GenBank:WP_001574216.1;Name=WP_001574216.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461549.1;locus_tag=CCO57_RS13960;product=phage holin%2C lambda family;protein_id=WP_001574216.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 275114 275566 . + . ID=gene-CCO57_RS13965;Name=CCO57_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13965;old_locus_tag=CCO57_13950 NZ_NPMC01000007.1 Protein Homology CDS 275114 275566 . + 0 ID=cds-WP_000984587.1;Parent=gene-CCO57_RS13965;Dbxref=GenBank:WP_000984587.1;Name=WP_000984587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460003.1;locus_tag=CCO57_RS13965;product=lysozyme;protein_id=WP_000984587.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 275584 276036 . + . ID=gene-CCO57_RS13970;Name=CCO57_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13970;old_locus_tag=CCO57_13955 NZ_NPMC01000007.1 Protein Homology CDS 275584 276036 . + 0 ID=cds-WP_001533543.1;Parent=gene-CCO57_RS13970;Dbxref=GenBank:WP_001533543.1;Name=WP_001533543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461547.3;locus_tag=CCO57_RS13970;product=lysis protein;protein_id=WP_001533543.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 276272 276673 . - . ID=gene-CCO57_RS13975;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=CCO57_RS13975;old_locus_tag=CCO57_13960 NZ_NPMC01000007.1 Protein Homology CDS 276272 276673 . - 0 ID=cds-WP_000669693.1;Parent=gene-CCO57_RS13975;Dbxref=GenBank:WP_000669693.1;Name=WP_000669693.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461546.1;locus_tag=CCO57_RS13975;product=g-type lysoyme inhibitor PliG;protein_id=WP_000669693.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 276960 277505 . + . ID=gene-CCO57_RS13980;Name=CCO57_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13980;old_locus_tag=CCO57_13965 NZ_NPMC01000007.1 Protein Homology CDS 276960 277505 . + 0 ID=cds-WP_001102153.1;Parent=gene-CCO57_RS13980;Dbxref=GenBank:WP_001102153.1;Name=WP_001102153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461545.2;locus_tag=CCO57_RS13980;product=terminase small subunit;protein_id=WP_001102153.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 277477 279408 . + . ID=gene-CCO57_RS13985;Name=CCO57_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13985;old_locus_tag=CCO57_13970 NZ_NPMC01000007.1 Protein Homology CDS 277477 279408 . + 0 ID=cds-WP_000623091.1;Parent=gene-CCO57_RS13985;Dbxref=GenBank:WP_000623091.1;Name=WP_000623091.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461544.1;locus_tag=CCO57_RS13985;product=phage terminase large subunit family protein;protein_id=WP_000623091.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 279392 279595 . + . ID=gene-CCO57_RS13990;Name=CCO57_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13990;old_locus_tag=CCO57_13975 NZ_NPMC01000007.1 Protein Homology CDS 279392 279595 . + 0 ID=cds-WP_000201415.1;Parent=gene-CCO57_RS13990;Dbxref=GenBank:WP_000201415.1;Name=WP_000201415.1;Ontology_term=GO:0019058;gbkey=CDS;go_process=viral life cycle|0019058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461543.1;locus_tag=CCO57_RS13990;product=phage head-tail joining protein;protein_id=WP_000201415.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 279592 281172 . + . ID=gene-CCO57_RS13995;Name=CCO57_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS13995;old_locus_tag=CCO57_13980 NZ_NPMC01000007.1 Protein Homology CDS 279592 281172 . + 0 ID=cds-WP_094914991.1;Parent=gene-CCO57_RS13995;Dbxref=GenBank:WP_094914991.1;Name=WP_094914991.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461542.1;locus_tag=CCO57_RS13995;product=phage portal protein;protein_id=WP_094914991.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 281162 282658 . + . ID=gene-CCO57_RS14000;Name=CCO57_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14000;old_locus_tag=CCO57_13985 NZ_NPMC01000007.1 Protein Homology CDS 281162 282658 . + 0 ID=cds-WP_001189498.1;Parent=gene-CCO57_RS14000;Dbxref=GenBank:WP_001189498.1;Name=WP_001189498.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461541.1;locus_tag=CCO57_RS14000;product=S49 family peptidase;protein_id=WP_001189498.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 282671 283018 . + . ID=gene-CCO57_RS14005;Name=CCO57_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14005;old_locus_tag=CCO57_13990 NZ_NPMC01000007.1 Protein Homology CDS 282671 283018 . + 0 ID=cds-WP_000011260.1;Parent=gene-CCO57_RS14005;Dbxref=GenBank:WP_000011260.1;Name=WP_000011260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461540.1;locus_tag=CCO57_RS14005;product=head decoration protein;protein_id=WP_000011260.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 283073 284101 . + . ID=gene-CCO57_RS14010;Name=CCO57_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14010;old_locus_tag=CCO57_13995 NZ_NPMC01000007.1 Protein Homology CDS 283073 284101 . + 0 ID=cds-WP_022742784.1;Parent=gene-CCO57_RS14010;Dbxref=GenBank:WP_022742784.1;Name=WP_022742784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461539.1;locus_tag=CCO57_RS14010;product=major capsid protein;protein_id=WP_022742784.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 284159 284524 . + . ID=gene-CCO57_RS14015;Name=CCO57_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14015;old_locus_tag=CCO57_14000 NZ_NPMC01000007.1 Protein Homology CDS 284159 284524 . + 0 ID=cds-WP_000201485.1;Parent=gene-CCO57_RS14015;Dbxref=GenBank:WP_000201485.1;Name=WP_000201485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461538.1;locus_tag=CCO57_RS14015;product=DNA-packaging protein FI;protein_id=WP_000201485.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 284535 284912 . + . ID=gene-CCO57_RS14020;Name=CCO57_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14020;old_locus_tag=CCO57_14005 NZ_NPMC01000007.1 Protein Homology CDS 284535 284912 . + 0 ID=cds-WP_000083293.1;Parent=gene-CCO57_RS14020;Dbxref=GenBank:WP_000083293.1;Name=WP_000083293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083295.1;locus_tag=CCO57_RS14020;product=head-tail joining protein;protein_id=WP_000083293.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 284899 285477 . + . ID=gene-CCO57_RS14025;Name=CCO57_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14025;old_locus_tag=CCO57_14010 NZ_NPMC01000007.1 Protein Homology CDS 284899 285477 . + 0 ID=cds-WP_000677089.1;Parent=gene-CCO57_RS14025;Dbxref=GenBank:WP_000677089.1;Name=WP_000677089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461536.1;locus_tag=CCO57_RS14025;product=phage tail protein;protein_id=WP_000677089.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 285474 285875 . + . ID=gene-CCO57_RS14030;Name=CCO57_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14030;old_locus_tag=CCO57_14015 NZ_NPMC01000007.1 Protein Homology CDS 285474 285875 . + 0 ID=cds-WP_000033885.1;Parent=gene-CCO57_RS14030;Dbxref=GenBank:WP_000033885.1;Name=WP_000033885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461534.1;locus_tag=CCO57_RS14030;product=phage minor tail U family protein;protein_id=WP_000033885.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 285883 286629 . + . ID=gene-CCO57_RS14035;Name=CCO57_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14035;old_locus_tag=CCO57_14020 NZ_NPMC01000007.1 Protein Homology CDS 285883 286629 . + 0 ID=cds-WP_000971954.1;Parent=gene-CCO57_RS14035;Dbxref=GenBank:WP_000971954.1;Name=WP_000971954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461533.1;locus_tag=CCO57_RS14035;product=phage tail tube protein;protein_id=WP_000971954.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 286680 287075 . + . ID=gene-CCO57_RS14040;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=CCO57_RS14040;old_locus_tag=CCO57_14025 NZ_NPMC01000007.1 Protein Homology CDS 286680 287075 . + 0 ID=cds-WP_000479607.1;Parent=gene-CCO57_RS14040;Dbxref=GenBank:WP_000479607.1;Name=WP_000479607.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461532.1;locus_tag=CCO57_RS14040;product=phage tail assembly chaperone G;protein_id=WP_000479607.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 287072 287410 . + . ID=gene-CCO57_RS14045;Name=CCO57_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14045;old_locus_tag=CCO57_14030 NZ_NPMC01000007.1 Protein Homology CDS 287072 287410 . + 0 ID=cds-WP_094914992.1;Parent=gene-CCO57_RS14045;Dbxref=GenBank:WP_094914992.1;Name=WP_094914992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461531.1;locus_tag=CCO57_RS14045;product=phage tail assembly protein T;protein_id=WP_094914992.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 287382 290477 . + . ID=gene-CCO57_RS14050;Name=CCO57_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14050;old_locus_tag=CCO57_14035 NZ_NPMC01000007.1 Protein Homology CDS 287382 290477 . + 0 ID=cds-WP_000372075.1;Parent=gene-CCO57_RS14050;Dbxref=GenBank:WP_000372075.1;Name=WP_000372075.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461530.1;locus_tag=CCO57_RS14050;product=phage tail tape measure protein;protein_id=WP_000372075.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 290480 290809 . + . ID=gene-CCO57_RS14055;Name=CCO57_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14055;old_locus_tag=CCO57_14040 NZ_NPMC01000007.1 Protein Homology CDS 290480 290809 . + 0 ID=cds-WP_000447369.1;Parent=gene-CCO57_RS14055;Dbxref=GenBank:WP_000447369.1;Name=WP_000447369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461529.1;locus_tag=CCO57_RS14055;product=phage tail protein;protein_id=WP_000447369.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 290819 291517 . + . ID=gene-CCO57_RS14060;Name=CCO57_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14060;old_locus_tag=CCO57_14045 NZ_NPMC01000007.1 Protein Homology CDS 290819 291517 . + 0 ID=cds-WP_001152689.1;Parent=gene-CCO57_RS14060;Dbxref=GenBank:WP_001152689.1;Name=WP_001152689.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461528.1;locus_tag=CCO57_RS14060;product=phage minor tail protein L;protein_id=WP_001152689.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 291524 292261 . + . ID=gene-CCO57_RS14065;Name=CCO57_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14065;old_locus_tag=CCO57_14050 NZ_NPMC01000007.1 Protein Homology CDS 291524 292261 . + 0 ID=cds-WP_000662741.1;Parent=gene-CCO57_RS14065;Dbxref=GenBank:WP_000662741.1;Name=WP_000662741.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000662739.1;locus_tag=CCO57_RS14065;product=C40 family peptidase;protein_id=WP_000662741.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 292159 292806 . + . ID=gene-CCO57_RS14070;Name=CCO57_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14070;old_locus_tag=CCO57_14055 NZ_NPMC01000007.1 Protein Homology CDS 292159 292806 . + 0 ID=cds-WP_000246124.1;Parent=gene-CCO57_RS14070;Dbxref=GenBank:WP_000246124.1;Name=WP_000246124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461526.1;locus_tag=CCO57_RS14070;product=tail assembly protein;protein_id=WP_000246124.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 292868 296230 . + . ID=gene-CCO57_RS14075;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=CCO57_RS14075;old_locus_tag=CCO57_14060 NZ_NPMC01000007.1 Protein Homology CDS 292868 296230 . + 0 ID=cds-WP_094888739.1;Parent=gene-CCO57_RS14075;Dbxref=GenBank:WP_094888739.1;Name=WP_094888739.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461525.2;locus_tag=CCO57_RS14075;product=phage attachment tail tip protein J;protein_id=WP_094888739.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 296269 296511 . + . ID=gene-CCO57_RS14080;Name=CCO57_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14080;old_locus_tag=CCO57_14065 NZ_NPMC01000007.1 Protein Homology CDS 296269 296511 . + 0 ID=cds-WP_000178853.1;Parent=gene-CCO57_RS14080;Dbxref=GenBank:WP_000178853.1;Name=WP_000178853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178849.1;locus_tag=CCO57_RS14080;product=hypothetical protein;protein_id=WP_000178853.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 296565 299006 . + . ID=gene-CCO57_RS14085;Name=CCO57_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14085;old_locus_tag=CCO57_14070 NZ_NPMC01000007.1 Protein Homology CDS 296565 299006 . + 0 ID=cds-WP_039513193.1;Parent=gene-CCO57_RS14085;Dbxref=GenBank:WP_039513193.1;Name=WP_039513193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=CCO57_RS14085;product=phage tail protein;protein_id=WP_039513193.1;transl_table=11 NZ_NPMC01000007.1 RefSeq gene 299006 299590 . + . ID=gene-CCO57_RS14090;Name=CCO57_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14090;old_locus_tag=CCO57_14075 NZ_NPMC01000007.1 Protein Homology CDS 299006 299590 . + 0 ID=cds-WP_000143179.1;Parent=gene-CCO57_RS14090;Dbxref=GenBank:WP_000143179.1;Name=WP_000143179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=CCO57_RS14090;product=tail fiber assembly protein;protein_id=WP_000143179.1;transl_table=11 ##sequence-region NZ_NPMC01000008.1 1 271030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000008.1 RefSeq region 1 271030 . + . ID=NZ_NPMC01000008.1:1..271030;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000008.1 RefSeq pseudogene 1 229 . - . ID=gene-CCO57_RS14095;Name=CCO57_RS14095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS14095;old_locus_tag=CCO57_14080;partial=true;pseudo=true;start_range=.,1 NZ_NPMC01000008.1 Protein Homology CDS 1 229 . - 0 ID=cds-CCO57_RS14095;Parent=gene-CCO57_RS14095;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=CCO57_RS14095;partial=true;product=flagellin FliC;pseudo=true;start_range=.,1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 486 1889 . + . ID=gene-CCO57_RS14100;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=CCO57_RS14100;old_locus_tag=CCO57_14085 NZ_NPMC01000008.1 Protein Homology CDS 486 1889 . + 0 ID=cds-WP_000146808.1;Parent=gene-CCO57_RS14100;Dbxref=GenBank:WP_000146808.1;Name=WP_000146808.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=CCO57_RS14100;product=flagellar filament capping protein FliD;protein_id=WP_000146808.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 1904 2311 . + . ID=gene-CCO57_RS14105;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=CCO57_RS14105;old_locus_tag=CCO57_14090 NZ_NPMC01000008.1 Protein Homology CDS 1904 2311 . + 0 ID=cds-WP_000287764.1;Parent=gene-CCO57_RS14105;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=CCO57_RS14105;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 2311 2679 . + . ID=gene-CCO57_RS14110;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=CCO57_RS14110;old_locus_tag=CCO57_14095 NZ_NPMC01000008.1 Protein Homology CDS 2311 2679 . + 0 ID=cds-WP_000204899.1;Parent=gene-CCO57_RS14110;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=CCO57_RS14110;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 2751 4235 . + . ID=gene-CCO57_RS14115;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=CCO57_RS14115;old_locus_tag=CCO57_14100 NZ_NPMC01000008.1 Protein Homology CDS 2751 4235 . + 0 ID=cds-WP_053258824.1;Parent=gene-CCO57_RS14115;Dbxref=GenBank:WP_053258824.1;Name=WP_053258824.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=CCO57_RS14115;product=alpha-amylase;protein_id=WP_053258824.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 4275 4688 . - . ID=gene-CCO57_RS14120;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=CCO57_RS14120;old_locus_tag=CCO57_14105 NZ_NPMC01000008.1 Protein Homology CDS 4275 4688 . - 0 ID=cds-WP_000754694.1;Parent=gene-CCO57_RS14120;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=CCO57_RS14120;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 4874 6079 . + . ID=gene-CCO57_RS14125;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=CCO57_RS14125;old_locus_tag=CCO57_14110 NZ_NPMC01000008.1 Protein Homology CDS 4874 6079 . + 0 ID=cds-WP_140428175.1;Parent=gene-CCO57_RS14125;Dbxref=GenBank:WP_140428175.1;Name=WP_140428175.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=CCO57_RS14125;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_140428175.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 6076 6309 . + . ID=gene-CCO57_RS14130;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=CCO57_RS14130;old_locus_tag=CCO57_14115 NZ_NPMC01000008.1 Protein Homology CDS 6076 6309 . + 0 ID=cds-WP_000790504.1;Parent=gene-CCO57_RS14130;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=CCO57_RS14130;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 6574 6960 . + . ID=gene-CCO57_RS14135;Name=CCO57_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14135;old_locus_tag=CCO57_14120 NZ_NPMC01000008.1 Protein Homology CDS 6574 6960 . + 0 ID=cds-WP_000639596.1;Parent=gene-CCO57_RS14135;Dbxref=GenBank:WP_000639596.1;Name=WP_000639596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=CCO57_RS14135;product=hypothetical protein;protein_id=WP_000639596.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 7080 7394 . - . ID=gene-CCO57_RS14140;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=CCO57_RS14140;old_locus_tag=CCO57_14125 NZ_NPMC01000008.1 Protein Homology CDS 7080 7394 . - 0 ID=cds-WP_000719039.1;Parent=gene-CCO57_RS14140;Dbxref=GenBank:WP_000719039.1;Name=WP_000719039.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=CCO57_RS14140;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719039.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 7611 9293 . + . ID=gene-CCO57_RS14145;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=CCO57_RS14145;old_locus_tag=CCO57_14130 NZ_NPMC01000008.1 Protein Homology CDS 7611 9293 . + 0 ID=cds-WP_001276832.1;Parent=gene-CCO57_RS14145;Dbxref=GenBank:WP_001276832.1;Name=WP_001276832.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=CCO57_RS14145;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_001276832.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 9286 10281 . + . ID=gene-CCO57_RS14150;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=CCO57_RS14150;old_locus_tag=CCO57_14135 NZ_NPMC01000008.1 Protein Homology CDS 9286 10281 . + 0 ID=cds-WP_000067735.1;Parent=gene-CCO57_RS14150;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=CCO57_RS14150;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 10274 10981 . + . ID=gene-CCO57_RS14155;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=CCO57_RS14155;old_locus_tag=CCO57_14140 NZ_NPMC01000008.1 Protein Homology CDS 10274 10981 . + 0 ID=cds-WP_000064158.1;Parent=gene-CCO57_RS14155;Dbxref=GenBank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=CCO57_RS14155;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 10981 12351 . + . ID=gene-CCO57_RS14160;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=CCO57_RS14160;old_locus_tag=CCO57_14145 NZ_NPMC01000008.1 Protein Homology CDS 10981 12351 . + 0 ID=cds-WP_000213257.1;Parent=gene-CCO57_RS14160;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=CCO57_RS14160;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 12373 12816 . + . ID=gene-CCO57_RS14165;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=CCO57_RS14165;old_locus_tag=CCO57_14150 NZ_NPMC01000008.1 Protein Homology CDS 12373 12816 . + 0 ID=cds-WP_000046981.1;Parent=gene-CCO57_RS14165;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=CCO57_RS14165;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 12813 14036 . + . ID=gene-CCO57_RS14170;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=CCO57_RS14170;old_locus_tag=CCO57_14155 NZ_NPMC01000008.1 Protein Homology CDS 12813 14036 . + 0 ID=cds-WP_000631677.1;Parent=gene-CCO57_RS14170;Dbxref=GenBank:WP_000631677.1;Name=WP_000631677.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=CCO57_RS14170;product=flagellar hook length control protein FliK;protein_id=WP_000631677.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 14141 14608 . + . ID=gene-CCO57_RS14175;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=CCO57_RS14175;old_locus_tag=CCO57_14160 NZ_NPMC01000008.1 Protein Homology CDS 14141 14608 . + 0 ID=cds-WP_000132169.1;Parent=gene-CCO57_RS14175;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=CCO57_RS14175;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 14613 15617 . + . ID=gene-CCO57_RS14180;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=CCO57_RS14180;old_locus_tag=CCO57_14165 NZ_NPMC01000008.1 Protein Homology CDS 14613 15617 . + 0 ID=cds-WP_000502811.1;Parent=gene-CCO57_RS14180;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=CCO57_RS14180;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 15614 16027 . + . ID=gene-CCO57_RS14185;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=CCO57_RS14185;old_locus_tag=CCO57_14170 NZ_NPMC01000008.1 Protein Homology CDS 15614 16027 . + 0 ID=cds-WP_001282111.1;Parent=gene-CCO57_RS14185;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=CCO57_RS14185;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 16027 16404 . + . ID=gene-CCO57_RS14190;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=CCO57_RS14190;old_locus_tag=CCO57_14175 NZ_NPMC01000008.1 Protein Homology CDS 16027 16404 . + 0 ID=cds-WP_001826368.1;Parent=gene-CCO57_RS14190;Dbxref=GenBank:WP_001826368.1;Name=WP_001826368.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=CCO57_RS14190;product=flagellar biosynthetic protein FliO;protein_id=WP_001826368.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 16404 17141 . + . ID=gene-CCO57_RS14195;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=CCO57_RS14195;old_locus_tag=CCO57_14180 NZ_NPMC01000008.1 Protein Homology CDS 16404 17141 . + 0 ID=cds-WP_001253411.1;Parent=gene-CCO57_RS14195;Dbxref=GenBank:WP_001253411.1;Name=WP_001253411.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=CCO57_RS14195;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253411.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 17151 17420 . + . ID=gene-CCO57_RS14200;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=CCO57_RS14200;old_locus_tag=CCO57_14185 NZ_NPMC01000008.1 Protein Homology CDS 17151 17420 . + 0 ID=cds-WP_000187355.1;Parent=gene-CCO57_RS14200;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=CCO57_RS14200;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 17429 18223 . + . ID=gene-CCO57_RS14205;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=CCO57_RS14205;old_locus_tag=CCO57_14190 NZ_NPMC01000008.1 Protein Homology CDS 17429 18223 . + 0 ID=cds-WP_000616953.1;Parent=gene-CCO57_RS14205;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=CCO57_RS14205;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 18505 19128 . + . ID=gene-CCO57_RS14210;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=CCO57_RS14210;old_locus_tag=CCO57_14195 NZ_NPMC01000008.1 Protein Homology CDS 18505 19128 . + 0 ID=cds-WP_000103971.1;Parent=gene-CCO57_RS14210;Dbxref=GenBank:WP_000103971.1;Name=WP_000103971.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=CCO57_RS14210;product=transcriptional regulator RcsA;protein_id=WP_000103971.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 19167 19361 . - . ID=gene-CCO57_RS14215;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=CCO57_RS14215;old_locus_tag=CCO57_14200 NZ_NPMC01000008.1 Protein Homology CDS 19167 19361 . - 0 ID=cds-WP_000867218.1;Parent=gene-CCO57_RS14215;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=CCO57_RS14215;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 19490 19717 . + . ID=gene-CCO57_RS14220;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=CCO57_RS14220;old_locus_tag=CCO57_14205 NZ_NPMC01000008.1 Protein Homology CDS 19490 19717 . + 0 ID=cds-WP_000844798.1;Parent=gene-CCO57_RS14220;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=CCO57_RS14220;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 20028 20843 . + . ID=gene-CCO57_RS14225;Name=CCO57_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14225;old_locus_tag=CCO57_14210 NZ_NPMC01000008.1 Protein Homology CDS 20028 20843 . + 0 ID=cds-WP_094914996.1;Parent=gene-CCO57_RS14225;Dbxref=GenBank:WP_094914996.1;Name=WP_094914996.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=CCO57_RS14225;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_094914996.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 20822 22534 . - . ID=gene-CCO57_RS14230;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=CCO57_RS14230;old_locus_tag=CCO57_14215 NZ_NPMC01000008.1 Protein Homology CDS 20822 22534 . - 0 ID=cds-WP_001119828.1;Parent=gene-CCO57_RS14230;Dbxref=GenBank:WP_001119828.1;Name=WP_001119828.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=CCO57_RS14230;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119828.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 22699 22884 . - . ID=gene-CCO57_RS14235;Name=CCO57_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14235;old_locus_tag=CCO57_14220 NZ_NPMC01000008.1 Protein Homology CDS 22699 22884 . - 0 ID=cds-WP_001521741.1;Parent=gene-CCO57_RS14235;Dbxref=GenBank:WP_001521741.1;Name=WP_001521741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=CCO57_RS14235;product=YodC family protein;protein_id=WP_001521741.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 22961 23878 . - . ID=gene-CCO57_RS14240;Name=CCO57_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14240;old_locus_tag=CCO57_14225 NZ_NPMC01000008.1 Protein Homology CDS 22961 23878 . - 0 ID=cds-WP_085920526.1;Parent=gene-CCO57_RS14240;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=CCO57_RS14240;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 24048 24968 . + . ID=gene-CCO57_RS14245;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=CCO57_RS14245;old_locus_tag=CCO57_14230 NZ_NPMC01000008.1 Protein Homology CDS 24048 24968 . + 0 ID=cds-WP_001212264.1;Parent=gene-CCO57_RS14245;Dbxref=GenBank:WP_001212264.1;Name=WP_001212264.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=CCO57_RS14245;product=drug/metabolite exporter YedA;protein_id=WP_001212264.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 24957 25427 . - . ID=gene-CCO57_RS14250;Name=CCO57_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14250;old_locus_tag=CCO57_14235 NZ_NPMC01000008.1 Protein Homology CDS 24957 25427 . - 0 ID=cds-WP_000785978.1;Parent=gene-CCO57_RS14250;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=CCO57_RS14250;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 25408 26838 . - . ID=gene-CCO57_RS14255;Name=CCO57_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14255;old_locus_tag=CCO57_14240 NZ_NPMC01000008.1 Protein Homology CDS 25408 26838 . - 0 ID=cds-WP_023137091.1;Parent=gene-CCO57_RS14255;Dbxref=GenBank:WP_023137091.1;Name=WP_023137091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=CCO57_RS14255;product=DNA cytosine methyltransferase;protein_id=WP_023137091.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 26912 27607 . - . ID=gene-CCO57_RS14260;Name=CCO57_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14260;old_locus_tag=CCO57_14245 NZ_NPMC01000008.1 Protein Homology CDS 26912 27607 . - 0 ID=cds-WP_094888495.1;Parent=gene-CCO57_RS14260;Dbxref=GenBank:WP_094888495.1;Name=WP_094888495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=CCO57_RS14260;product=phosphohydrolase;protein_id=WP_094888495.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 27699 27998 . - . ID=gene-CCO57_RS14265;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=CCO57_RS14265;old_locus_tag=CCO57_14250 NZ_NPMC01000008.1 Protein Homology CDS 27699 27998 . - 0 ID=cds-WP_094888494.1;Parent=gene-CCO57_RS14265;Dbxref=GenBank:WP_094888494.1;Name=WP_094888494.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=CCO57_RS14265;product=cell division protein DrpB;protein_id=WP_094888494.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 28647 29825 . + . ID=gene-CCO57_RS14270;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=CCO57_RS14270;old_locus_tag=CCO57_14255 NZ_NPMC01000008.1 Protein Homology CDS 28647 29825 . + 0 ID=cds-WP_039514025.1;Parent=gene-CCO57_RS14270;Dbxref=GenBank:WP_039514025.1;Name=WP_039514025.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=CCO57_RS14270;product=porin OmpS1;protein_id=WP_039514025.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 30085 30273 . - . ID=gene-CCO57_RS14275;Name=CCO57_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14275;old_locus_tag=CCO57_14260 NZ_NPMC01000008.1 Protein Homology CDS 30085 30273 . - 0 ID=cds-WP_024131109.1;Parent=gene-CCO57_RS14275;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=CCO57_RS14275;product=hypothetical protein;protein_id=WP_024131109.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 30284 30496 . - . ID=gene-CCO57_RS14280;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO57_RS14280;old_locus_tag=CCO57_14265 NZ_NPMC01000008.1 Protein Homology CDS 30284 30496 . - 0 ID=cds-WP_000208509.1;Parent=gene-CCO57_RS14280;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=CCO57_RS14280;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 30951 32219 . - . ID=gene-CCO57_RS14285;Name=CCO57_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14285;old_locus_tag=CCO57_14270 NZ_NPMC01000008.1 Protein Homology CDS 30951 32219 . - 0 ID=cds-WP_069721389.1;Parent=gene-CCO57_RS14285;Dbxref=GenBank:WP_069721389.1;Name=WP_069721389.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO57_RS14285;product=Y-family DNA polymerase;protein_id=WP_069721389.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 32222 32641 . - . ID=gene-CCO57_RS14290;Name=CCO57_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14290;old_locus_tag=CCO57_14275 NZ_NPMC01000008.1 Protein Homology CDS 32222 32641 . - 0 ID=cds-WP_058214695.1;Parent=gene-CCO57_RS14290;Dbxref=GenBank:WP_058214695.1;Name=WP_058214695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=CCO57_RS14290;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_058214695.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 33232 33321 . - . ID=gene-CCO57_RS14305;Name=CCO57_RS14305;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS14305;old_locus_tag=CCO57_14290 NZ_NPMC01000008.1 tRNAscan-SE tRNA 33232 33321 . - . ID=rna-CCO57_RS14305;Parent=gene-CCO57_RS14305;anticodon=(pos:complement(33285..33287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS14305;product=tRNA-Ser NZ_NPMC01000008.1 tRNAscan-SE exon 33232 33321 . - . ID=exon-CCO57_RS14305-1;Parent=rna-CCO57_RS14305;anticodon=(pos:complement(33285..33287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS14305;product=tRNA-Ser NZ_NPMC01000008.1 RefSeq gene 33410 34207 . + . ID=gene-CCO57_RS14310;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=CCO57_RS14310;old_locus_tag=CCO57_14295 NZ_NPMC01000008.1 Protein Homology CDS 33410 34207 . + 0 ID=cds-WP_000598918.1;Parent=gene-CCO57_RS14310;Dbxref=GenBank:WP_000598918.1;Name=WP_000598918.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=CCO57_RS14310;product=DgsA anti-repressor MtfA;protein_id=WP_000598918.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 34308 34383 . + . ID=gene-CCO57_RS14315;Name=CCO57_RS14315;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS14315;old_locus_tag=CCO57_14300 NZ_NPMC01000008.1 tRNAscan-SE tRNA 34308 34383 . + . ID=rna-CCO57_RS14315;Parent=gene-CCO57_RS14315;anticodon=(pos:34341..34343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS14315;product=tRNA-Asn NZ_NPMC01000008.1 tRNAscan-SE exon 34308 34383 . + . ID=exon-CCO57_RS14315-1;Parent=rna-CCO57_RS14315;anticodon=(pos:34341..34343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS14315;product=tRNA-Asn NZ_NPMC01000008.1 RefSeq pseudogene 34551 34815 . + . ID=gene-CCO57_RS24625;Name=CCO57_RS24625;end_range=34815,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24625;old_locus_tag=CCO57_14305;partial=true;pseudo=true NZ_NPMC01000008.1 Protein Homology CDS 34551 34815 . + 0 ID=cds-CCO57_RS24625;Parent=gene-CCO57_RS24625;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=34815,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743378.1;locus_tag=CCO57_RS24625;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 34984 35059 . + . ID=gene-CCO57_RS14325;Name=CCO57_RS14325;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS14325;old_locus_tag=CCO57_14310 NZ_NPMC01000008.1 tRNAscan-SE tRNA 34984 35059 . + . ID=rna-CCO57_RS14325;Parent=gene-CCO57_RS14325;anticodon=(pos:35017..35019);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS14325;product=tRNA-Asn NZ_NPMC01000008.1 tRNAscan-SE exon 34984 35059 . + . ID=exon-CCO57_RS14325-1;Parent=rna-CCO57_RS14325;anticodon=(pos:35017..35019);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS14325;product=tRNA-Asn NZ_NPMC01000008.1 RefSeq gene 35562 37016 . - . ID=gene-CCO57_RS14335;Name=CCO57_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14335;old_locus_tag=CCO57_14320 NZ_NPMC01000008.1 Protein Homology CDS 35562 37016 . - 0 ID=cds-WP_094914997.1;Parent=gene-CCO57_RS14335;Dbxref=GenBank:WP_094914997.1;Name=WP_094914997.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=CCO57_RS14335;product=AMP nucleosidase;protein_id=WP_094914997.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 37062 37223 . + . ID=gene-CCO57_RS14340;Name=CCO57_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14340;old_locus_tag=CCO57_14325 NZ_NPMC01000008.1 Protein Homology CDS 37062 37223 . + 0 ID=cds-WP_001634510.1;Parent=gene-CCO57_RS14340;Dbxref=GenBank:WP_001634510.1;Name=WP_001634510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=CCO57_RS14340;product=hypothetical protein;protein_id=WP_001634510.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 37212 37538 . - . ID=gene-CCO57_RS14345;Name=CCO57_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14345;old_locus_tag=CCO57_14330 NZ_NPMC01000008.1 Protein Homology CDS 37212 37538 . - 0 ID=cds-WP_000228161.1;Parent=gene-CCO57_RS14345;Dbxref=GenBank:WP_000228161.1;Name=WP_000228161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=CCO57_RS14345;product=DUF1493 family protein;protein_id=WP_000228161.1;transl_table=11 NZ_NPMC01000008.1 RefSeq pseudogene 37532 37997 . - . ID=gene-CCO57_RS14350;Name=CCO57_RS14350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS14350;old_locus_tag=CCO57_14335;pseudo=true NZ_NPMC01000008.1 Protein Homology CDS 37532 37997 . - 0 ID=cds-CCO57_RS14350;Parent=gene-CCO57_RS14350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=CCO57_RS14350;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 38419 38494 . - . ID=gene-CCO57_RS14360;Name=CCO57_RS14360;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS14360;old_locus_tag=CCO57_14345 NZ_NPMC01000008.1 tRNAscan-SE tRNA 38419 38494 . - . ID=rna-CCO57_RS14360;Parent=gene-CCO57_RS14360;anticodon=(pos:complement(38459..38461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS14360;product=tRNA-Asn NZ_NPMC01000008.1 tRNAscan-SE exon 38419 38494 . - . ID=exon-CCO57_RS14360-1;Parent=rna-CCO57_RS14360;anticodon=(pos:complement(38459..38461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS14360;product=tRNA-Asn NZ_NPMC01000008.1 RefSeq gene 38635 40092 . - . ID=gene-CCO57_RS14365;Name=CCO57_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14365;old_locus_tag=CCO57_14350 NZ_NPMC01000008.1 Protein Homology CDS 38635 40092 . - 0 ID=cds-WP_001542574.1;Parent=gene-CCO57_RS14365;Dbxref=GenBank:WP_001542574.1;Name=WP_001542574.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=CCO57_RS14365;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_001542574.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 40252 40327 . + . ID=gene-CCO57_RS14370;Name=CCO57_RS14370;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS14370;old_locus_tag=CCO57_14355 NZ_NPMC01000008.1 tRNAscan-SE tRNA 40252 40327 . + . ID=rna-CCO57_RS14370;Parent=gene-CCO57_RS14370;anticodon=(pos:40285..40287);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS14370;product=tRNA-Asn NZ_NPMC01000008.1 tRNAscan-SE exon 40252 40327 . + . ID=exon-CCO57_RS14370-1;Parent=rna-CCO57_RS14370;anticodon=(pos:40285..40287);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS14370;product=tRNA-Asn NZ_NPMC01000008.1 RefSeq gene 40554 41483 . - . ID=gene-CCO57_RS14375;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=CCO57_RS14375;old_locus_tag=CCO57_14360 NZ_NPMC01000008.1 Protein Homology CDS 40554 41483 . - 0 ID=cds-WP_001252817.1;Parent=gene-CCO57_RS14375;Dbxref=GenBank:WP_001252817.1;Name=WP_001252817.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=CCO57_RS14375;product=L%2CD-transpeptidase;protein_id=WP_001252817.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 41561 42631 . - . ID=gene-CCO57_RS14380;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CCO57_RS14380;old_locus_tag=CCO57_14365 NZ_NPMC01000008.1 Protein Homology CDS 41561 42631 . - 0 ID=cds-WP_001193967.1;Parent=gene-CCO57_RS14380;Dbxref=GenBank:WP_001193967.1;Name=WP_001193967.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=CCO57_RS14380;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193967.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 42658 43401 . - . ID=gene-CCO57_RS14385;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=CCO57_RS14385;old_locus_tag=CCO57_14370 NZ_NPMC01000008.1 Protein Homology CDS 42658 43401 . - 0 ID=cds-WP_000039998.1;Parent=gene-CCO57_RS14385;Dbxref=GenBank:WP_000039998.1;Name=WP_000039998.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=CCO57_RS14385;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_000039998.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 43398 43943 . - . ID=gene-CCO57_RS14390;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=CCO57_RS14390;old_locus_tag=CCO57_14375 NZ_NPMC01000008.1 Protein Homology CDS 43398 43943 . - 0 ID=cds-WP_000973188.1;Parent=gene-CCO57_RS14390;Dbxref=GenBank:WP_000973188.1;Name=WP_000973188.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=CCO57_RS14390;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973188.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 43940 45460 . - . ID=gene-CCO57_RS14395;Name=CCO57_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14395;old_locus_tag=CCO57_14380 NZ_NPMC01000008.1 Protein Homology CDS 43940 45460 . - 0 ID=cds-WP_000189660.1;Parent=gene-CCO57_RS14395;Dbxref=GenBank:WP_000189660.1;Name=WP_000189660.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=CCO57_RS14395;product=cobyric acid synthase;protein_id=WP_000189660.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 45457 46272 . - . ID=gene-CCO57_RS14400;Name=CCO57_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14400;old_locus_tag=CCO57_14385 NZ_NPMC01000008.1 Protein Homology CDS 45457 46272 . - 0 ID=cds-WP_000881544.1;Parent=gene-CCO57_RS14400;Dbxref=GenBank:WP_000881544.1;Name=WP_000881544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=CCO57_RS14400;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881544.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 46281 46958 . - . ID=gene-CCO57_RS14405;Name=CCO57_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14405;old_locus_tag=CCO57_14390 NZ_NPMC01000008.1 Protein Homology CDS 46281 46958 . - 0 ID=cds-WP_001728372.1;Parent=gene-CCO57_RS14405;Dbxref=GenBank:WP_001728372.1;Name=WP_001728372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=CCO57_RS14405;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_001728372.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 46945 47226 . - . ID=gene-CCO57_RS14410;Name=CCO57_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14410;old_locus_tag=CCO57_14395 NZ_NPMC01000008.1 Protein Homology CDS 46945 47226 . - 0 ID=cds-WP_000753212.1;Parent=gene-CCO57_RS14410;Dbxref=GenBank:WP_000753212.1;Name=WP_000753212.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=CCO57_RS14410;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753212.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 47228 47965 . - . ID=gene-CCO57_RS14415;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=CCO57_RS14415;old_locus_tag=CCO57_14400 NZ_NPMC01000008.1 Protein Homology CDS 47228 47965 . - 0 ID=cds-WP_000764336.1;Parent=gene-CCO57_RS14415;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=CCO57_RS14415;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 47962 48675 . - . ID=gene-CCO57_RS14420;Name=CCO57_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14420;old_locus_tag=CCO57_14405 NZ_NPMC01000008.1 Protein Homology CDS 47962 48675 . - 0 ID=cds-WP_001013552.1;Parent=gene-CCO57_RS14420;Dbxref=GenBank:WP_001013552.1;Name=WP_001013552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=CCO57_RS14420;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013552.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 48672 49466 . - . ID=gene-CCO57_RS14425;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=CCO57_RS14425;old_locus_tag=CCO57_14410 NZ_NPMC01000008.1 Protein Homology CDS 48672 49466 . - 0 ID=cds-WP_080177754.1;Parent=gene-CCO57_RS14425;Dbxref=GenBank:WP_080177754.1;Name=WP_080177754.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=CCO57_RS14425;product=sirohydrochlorin cobaltochelatase;protein_id=WP_080177754.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 49469 50260 . - . ID=gene-CCO57_RS14430;Name=CCO57_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14430;old_locus_tag=CCO57_14415 NZ_NPMC01000008.1 Protein Homology CDS 49469 50260 . - 0 ID=cds-WP_001001983.1;Parent=gene-CCO57_RS14430;Dbxref=GenBank:WP_001001983.1;Name=WP_001001983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=CCO57_RS14430;product=cobalt-precorrin-6A reductase;protein_id=WP_001001983.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 50257 50982 . - . ID=gene-CCO57_RS14435;Name=CCO57_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14435;old_locus_tag=CCO57_14420 NZ_NPMC01000008.1 Protein Homology CDS 50257 50982 . - 0 ID=cds-WP_080094841.1;Parent=gene-CCO57_RS14435;Dbxref=GenBank:WP_080094841.1;Name=WP_080094841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=CCO57_RS14435;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_080094841.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 50982 52037 . - . ID=gene-CCO57_RS14440;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=CCO57_RS14440;old_locus_tag=CCO57_14425 NZ_NPMC01000008.1 Protein Homology CDS 50982 52037 . - 0 ID=cds-WP_001098922.1;Parent=gene-CCO57_RS14440;Dbxref=GenBank:WP_001098922.1;Name=WP_001098922.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=CCO57_RS14440;product=cobalt-precorrin 5A hydrolase;protein_id=WP_001098922.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 52018 52791 . - . ID=gene-CCO57_RS14445;Name=CCO57_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14445;old_locus_tag=CCO57_14430 NZ_NPMC01000008.1 Protein Homology CDS 52018 52791 . - 0 ID=cds-WP_000004870.1;Parent=gene-CCO57_RS14445;Dbxref=GenBank:WP_000004870.1;Name=WP_000004870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=CCO57_RS14445;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_000004870.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 52775 53353 . - . ID=gene-CCO57_RS14450;Name=CCO57_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14450;old_locus_tag=CCO57_14435 NZ_NPMC01000008.1 Protein Homology CDS 52775 53353 . - 0 ID=cds-WP_000650985.1;Parent=gene-CCO57_RS14450;Dbxref=GenBank:WP_000650985.1;Name=WP_000650985.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=CCO57_RS14450;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650985.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 53343 53948 . - . ID=gene-CCO57_RS14455;Name=CCO57_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14455;old_locus_tag=CCO57_14440 NZ_NPMC01000008.1 Protein Homology CDS 53343 53948 . - 0 ID=cds-WP_000958829.1;Parent=gene-CCO57_RS14455;Dbxref=GenBank:WP_000958829.1;Name=WP_000958829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=CCO57_RS14455;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958829.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 53942 55081 . - . ID=gene-CCO57_RS14460;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=CCO57_RS14460;old_locus_tag=CCO57_14445 NZ_NPMC01000008.1 Protein Homology CDS 53942 55081 . - 0 ID=cds-WP_001292922.1;Parent=gene-CCO57_RS14460;Dbxref=GenBank:WP_001292922.1;Name=WP_001292922.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=CCO57_RS14460;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292922.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 55081 55713 . - . ID=gene-CCO57_RS14465;Name=CCO57_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14465;old_locus_tag=CCO57_14450 NZ_NPMC01000008.1 Protein Homology CDS 55081 55713 . - 0 ID=cds-WP_000558994.1;Parent=gene-CCO57_RS14465;Dbxref=GenBank:WP_000558994.1;Name=WP_000558994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=CCO57_RS14465;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558994.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 55724 56683 . - . ID=gene-CCO57_RS14470;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=CCO57_RS14470;old_locus_tag=CCO57_14455 NZ_NPMC01000008.1 Protein Homology CDS 55724 56683 . - 0 ID=cds-WP_000153654.1;Parent=gene-CCO57_RS14470;Dbxref=GenBank:WP_000153654.1;Name=WP_000153654.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=CCO57_RS14470;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153654.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 56680 58059 . - . ID=gene-CCO57_RS14475;Name=CCO57_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14475;old_locus_tag=CCO57_14460 NZ_NPMC01000008.1 Protein Homology CDS 56680 58059 . - 0 ID=cds-WP_094914998.1;Parent=gene-CCO57_RS14475;Dbxref=GenBank:WP_094914998.1;Name=WP_094914998.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=CCO57_RS14475;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_094914998.1;transl_table=11 NZ_NPMC01000008.1 cmsearch riboswitch 58157 58331 . - . ID=id-NZ_NPMC01000008.1:58157..58331;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMC01000008.1 RefSeq gene 58657 59568 . - . ID=gene-CCO57_RS14480;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=CCO57_RS14480;old_locus_tag=CCO57_14465 NZ_NPMC01000008.1 Protein Homology CDS 58657 59568 . - 0 ID=cds-WP_000622323.1;Parent=gene-CCO57_RS14480;Dbxref=GenBank:WP_000622323.1;Name=WP_000622323.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=CCO57_RS14480;product=transcriptional regulator PocR;protein_id=WP_000622323.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 59785 60579 . - . ID=gene-CCO57_RS14485;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=CCO57_RS14485;old_locus_tag=CCO57_14470 NZ_NPMC01000008.1 Protein Homology CDS 59785 60579 . - 0 ID=cds-WP_001000023.1;Parent=gene-CCO57_RS14485;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=CCO57_RS14485;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 61104 61388 . + . ID=gene-CCO57_RS14490;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=CCO57_RS14490;old_locus_tag=CCO57_14475 NZ_NPMC01000008.1 Protein Homology CDS 61104 61388 . + 0 ID=cds-WP_001183618.1;Parent=gene-CCO57_RS14490;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=CCO57_RS14490;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 61385 62197 . + . ID=gene-CCO57_RS14495;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=CCO57_RS14495;old_locus_tag=CCO57_14480 NZ_NPMC01000008.1 Protein Homology CDS 61385 62197 . + 0 ID=cds-WP_000097500.1;Parent=gene-CCO57_RS14495;Dbxref=GenBank:WP_000097500.1;Name=WP_000097500.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=CCO57_RS14495;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097500.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 62216 63880 . + . ID=gene-CCO57_RS14500;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=CCO57_RS14500;old_locus_tag=CCO57_14485 NZ_NPMC01000008.1 Protein Homology CDS 62216 63880 . + 0 ID=cds-WP_001256896.1;Parent=gene-CCO57_RS14500;Dbxref=GenBank:WP_001256896.1;Name=WP_001256896.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=CCO57_RS14500;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256896.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 63891 64565 . + . ID=gene-CCO57_RS14505;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=CCO57_RS14505;old_locus_tag=CCO57_14490 NZ_NPMC01000008.1 Protein Homology CDS 63891 64565 . + 0 ID=cds-WP_000405049.1;Parent=gene-CCO57_RS14505;Dbxref=GenBank:WP_000405049.1;Name=WP_000405049.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=CCO57_RS14505;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405049.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 64580 65101 . + . ID=gene-CCO57_RS14510;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=CCO57_RS14510;old_locus_tag=CCO57_14495 NZ_NPMC01000008.1 Protein Homology CDS 64580 65101 . + 0 ID=cds-WP_094914999.1;Parent=gene-CCO57_RS14510;Dbxref=GenBank:WP_094914999.1;Name=WP_094914999.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=CCO57_RS14510;product=propanediol dehydratase small subunit PduE;protein_id=WP_094914999.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 65117 66949 . + . ID=gene-CCO57_RS14515;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=CCO57_RS14515;old_locus_tag=CCO57_14500 NZ_NPMC01000008.1 Protein Homology CDS 65117 66949 . + 0 ID=cds-WP_023226438.1;Parent=gene-CCO57_RS14515;Dbxref=GenBank:WP_023226438.1;Name=WP_023226438.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=CCO57_RS14515;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_023226438.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 66939 67289 . + . ID=gene-CCO57_RS14520;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=CCO57_RS14520;old_locus_tag=CCO57_14505 NZ_NPMC01000008.1 Protein Homology CDS 66939 67289 . + 0 ID=cds-WP_000377981.1;Parent=gene-CCO57_RS14520;Dbxref=GenBank:WP_000377981.1;Name=WP_000377981.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=CCO57_RS14520;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377981.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 67309 67584 . + . ID=gene-CCO57_RS14525;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=CCO57_RS14525;old_locus_tag=CCO57_14510 NZ_NPMC01000008.1 Protein Homology CDS 67309 67584 . + 0 ID=cds-WP_001057755.1;Parent=gene-CCO57_RS14525;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=CCO57_RS14525;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 67588 68070 . + . ID=gene-CCO57_RS14530;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=CCO57_RS14530;old_locus_tag=CCO57_14515 NZ_NPMC01000008.1 Protein Homology CDS 67588 68070 . + 0 ID=cds-WP_001284383.1;Parent=gene-CCO57_RS14530;Dbxref=GenBank:WP_001284383.1;Name=WP_001284383.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=CCO57_RS14530;product=propanediol utilization microcompartment protein PduK;protein_id=WP_001284383.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 68070 68702 . + . ID=gene-CCO57_RS14535;Name=CCO57_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14535;old_locus_tag=CCO57_14520 NZ_NPMC01000008.1 Protein Homology CDS 68070 68702 . + 0 ID=cds-WP_094915000.1;Parent=gene-CCO57_RS14535;Dbxref=GenBank:WP_094915000.1;Name=WP_094915000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=CCO57_RS14535;product=phosphate propanoyltransferase;protein_id=WP_094915000.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 68699 69190 . + . ID=gene-CCO57_RS14540;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=CCO57_RS14540;old_locus_tag=CCO57_14525 NZ_NPMC01000008.1 Protein Homology CDS 68699 69190 . + 0 ID=cds-WP_079842019.1;Parent=gene-CCO57_RS14540;Dbxref=GenBank:WP_079842019.1;Name=WP_079842019.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=CCO57_RS14540;product=propanediol utilization microcompartment protein PduM;protein_id=WP_079842019.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 69194 69469 . + . ID=gene-CCO57_RS14545;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=CCO57_RS14545;old_locus_tag=CCO57_14530 NZ_NPMC01000008.1 Protein Homology CDS 69194 69469 . + 0 ID=cds-WP_000549823.1;Parent=gene-CCO57_RS14545;Dbxref=GenBank:WP_000549823.1;Name=WP_000549823.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=CCO57_RS14545;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549823.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 69479 70489 . + . ID=gene-CCO57_RS14550;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=CCO57_RS14550;old_locus_tag=CCO57_14535 NZ_NPMC01000008.1 Protein Homology CDS 69479 70489 . + 0 ID=cds-WP_001029478.1;Parent=gene-CCO57_RS14550;Dbxref=GenBank:WP_001029478.1;Name=WP_001029478.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=CCO57_RS14550;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_001029478.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 70486 71880 . + . ID=gene-CCO57_RS14555;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=CCO57_RS14555;old_locus_tag=CCO57_14540 NZ_NPMC01000008.1 Protein Homology CDS 70486 71880 . + 0 ID=cds-WP_001097675.1;Parent=gene-CCO57_RS14555;Dbxref=GenBank:WP_001097675.1;Name=WP_001097675.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=CCO57_RS14555;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_001097675.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 71892 73004 . + . ID=gene-CCO57_RS14560;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=CCO57_RS14560;old_locus_tag=CCO57_14545 NZ_NPMC01000008.1 Protein Homology CDS 71892 73004 . + 0 ID=cds-WP_080166932.1;Parent=gene-CCO57_RS14560;Dbxref=GenBank:WP_080166932.1;Name=WP_080166932.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=CCO57_RS14560;product=1-propanol dehydrogenase PduQ;protein_id=WP_080166932.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 73001 74356 . + . ID=gene-CCO57_RS14565;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=CCO57_RS14565;old_locus_tag=CCO57_14550 NZ_NPMC01000008.1 Protein Homology CDS 73001 74356 . + 0 ID=cds-WP_094915001.1;Parent=gene-CCO57_RS14565;Dbxref=GenBank:WP_094915001.1;Name=WP_094915001.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=CCO57_RS14565;product=cobalamin reductase PduS;protein_id=WP_094915001.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 74359 74913 . + . ID=gene-CCO57_RS14570;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=CCO57_RS14570;old_locus_tag=CCO57_14555 NZ_NPMC01000008.1 Protein Homology CDS 74359 74913 . + 0 ID=cds-WP_000075777.1;Parent=gene-CCO57_RS14570;Dbxref=GenBank:WP_000075777.1;Name=WP_000075777.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=CCO57_RS14570;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075777.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 74913 75263 . + . ID=gene-CCO57_RS14575;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=CCO57_RS14575;old_locus_tag=CCO57_14560 NZ_NPMC01000008.1 Protein Homology CDS 74913 75263 . + 0 ID=cds-WP_000441100.1;Parent=gene-CCO57_RS14575;Dbxref=GenBank:WP_000441100.1;Name=WP_000441100.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=CCO57_RS14575;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441100.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 75268 75720 . + . ID=gene-CCO57_RS14580;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=CCO57_RS14580;old_locus_tag=CCO57_14565 NZ_NPMC01000008.1 Protein Homology CDS 75268 75720 . + 0 ID=cds-WP_000826270.1;Parent=gene-CCO57_RS14580;Dbxref=GenBank:WP_000826270.1;Name=WP_000826270.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=CCO57_RS14580;product=propanediol utilization protein PduV;protein_id=WP_000826270.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 75705 76919 . + . ID=gene-CCO57_RS14585;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=CCO57_RS14585;old_locus_tag=CCO57_14570 NZ_NPMC01000008.1 Protein Homology CDS 75705 76919 . + 0 ID=cds-WP_000120647.1;Parent=gene-CCO57_RS14585;Dbxref=GenBank:WP_000120647.1;Name=WP_000120647.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=CCO57_RS14585;product=propanediol utilization propionate kinase PduW;protein_id=WP_000120647.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 77013 77879 . + . ID=gene-CCO57_RS14590;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=CCO57_RS14590;old_locus_tag=CCO57_14575 NZ_NPMC01000008.1 Protein Homology CDS 77013 77879 . + 0 ID=cds-WP_031617815.1;Parent=gene-CCO57_RS14590;Dbxref=GenBank:WP_031617815.1;Name=WP_031617815.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=CCO57_RS14590;product=L-threonine kinase PduX;protein_id=WP_031617815.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 77913 78248 . - . ID=gene-CCO57_RS14595;Name=CCO57_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14595;old_locus_tag=CCO57_14580 NZ_NPMC01000008.1 Protein Homology CDS 77913 78248 . - 0 ID=cds-WP_000450405.1;Parent=gene-CCO57_RS14595;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=CCO57_RS14595;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 78493 79551 . - . ID=gene-CCO57_RS14600;Name=CCO57_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14600;old_locus_tag=CCO57_14585 NZ_NPMC01000008.1 Protein Homology CDS 78493 79551 . - 0 ID=cds-WP_001200858.1;Parent=gene-CCO57_RS14600;Dbxref=GenBank:WP_001200858.1;Name=WP_001200858.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=CCO57_RS14600;product=FUSC family protein;protein_id=WP_001200858.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 79670 80137 . - . ID=gene-CCO57_RS14610;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=CCO57_RS14610;old_locus_tag=CCO57_14595 NZ_NPMC01000008.1 Protein Homology CDS 79670 80137 . - 0 ID=cds-WP_000384326.1;Parent=gene-CCO57_RS14610;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=CCO57_RS14610;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 80288 81460 . - . ID=gene-CCO57_RS14615;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=CCO57_RS14615;old_locus_tag=CCO57_14600 NZ_NPMC01000008.1 Protein Homology CDS 80288 81460 . - 0 ID=cds-WP_000925038.1;Parent=gene-CCO57_RS14615;Dbxref=GenBank:WP_000925038.1;Name=WP_000925038.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=CCO57_RS14615;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000925038.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 81584 82348 . - . ID=gene-CCO57_RS14620;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=CCO57_RS14620;old_locus_tag=CCO57_14605 NZ_NPMC01000008.1 Protein Homology CDS 81584 82348 . - 0 ID=cds-WP_058214710.1;Parent=gene-CCO57_RS14620;Dbxref=GenBank:WP_058214710.1;Name=WP_058214710.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=CCO57_RS14620;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_058214710.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 82345 82923 . - . ID=gene-CCO57_RS14625;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=CCO57_RS14625;old_locus_tag=CCO57_14610 NZ_NPMC01000008.1 Protein Homology CDS 82345 82923 . - 0 ID=cds-WP_001016236.1;Parent=gene-CCO57_RS14625;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=CCO57_RS14625;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 82938 85214 . - . ID=gene-CCO57_RS14630;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=CCO57_RS14630;old_locus_tag=CCO57_14615 NZ_NPMC01000008.1 Protein Homology CDS 82938 85214 . - 0 ID=cds-WP_094915002.1;Parent=gene-CCO57_RS14630;Dbxref=GenBank:WP_094915002.1;Name=WP_094915002.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=CCO57_RS14630;product=thiosulfate reductase PhsA;protein_id=WP_094915002.1;transl_table=11 NZ_NPMC01000008.1 RefSeq pseudogene 85474 85567 . - . ID=gene-CCO57_RS24325;Name=CCO57_RS24325;end_range=85567,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24325;partial=true;pseudo=true;start_range=.,85474 NZ_NPMC01000008.1 Protein Homology CDS 85474 85567 . - 0 ID=cds-CCO57_RS24325;Parent=gene-CCO57_RS24325;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=85567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO57_RS24325;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,85474;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 85835 88183 . + . ID=gene-CCO57_RS14640;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=CCO57_RS14640;old_locus_tag=CCO57_14625 NZ_NPMC01000008.1 Protein Homology CDS 85835 88183 . + 0 ID=cds-WP_094915003.1;Parent=gene-CCO57_RS14640;Dbxref=GenBank:WP_094915003.1;Name=WP_094915003.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=CCO57_RS14640;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_094915003.1;transl_table=11 NZ_NPMC01000008.1 RefSeq pseudogene 88313 88390 . - . ID=gene-CCO57_RS24635;Name=CCO57_RS24635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24635;partial=true;pseudo=true;start_range=.,88313 NZ_NPMC01000008.1 Protein Homology CDS 88313 88390 . - 0 ID=cds-CCO57_RS24635;Parent=gene-CCO57_RS24635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=CCO57_RS24635;partial=true;product=hypothetical protein;pseudo=true;start_range=.,88313;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 88526 89956 . + . ID=gene-CCO57_RS14645;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=CCO57_RS14645;old_locus_tag=CCO57_14630 NZ_NPMC01000008.1 Protein Homology CDS 88526 89956 . + 0 ID=cds-WP_000216699.1;Parent=gene-CCO57_RS14645;Dbxref=GenBank:WP_000216699.1;Name=WP_000216699.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=CCO57_RS14645;product=exodeoxyribonuclease I;protein_id=WP_000216699.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 90092 91450 . - . ID=gene-CCO57_RS14650;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=CCO57_RS14650;old_locus_tag=CCO57_14635 NZ_NPMC01000008.1 Protein Homology CDS 90092 91450 . - 0 ID=cds-WP_001519005.1;Parent=gene-CCO57_RS14650;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=CCO57_RS14650;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 91440 91502 . - . ID=gene-CCO57_RS24115;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=CCO57_RS24115 NZ_NPMC01000008.1 Protein Homology CDS 91440 91502 . - 0 ID=cds-WP_096335044.1;Parent=gene-CCO57_RS24115;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=CCO57_RS24115;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 91736 92650 . - . ID=gene-CCO57_RS14655;Name=CCO57_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14655;old_locus_tag=CCO57_14640 NZ_NPMC01000008.1 Protein Homology CDS 91736 92650 . - 0 ID=cds-WP_000803384.1;Parent=gene-CCO57_RS14655;Dbxref=GenBank:WP_000803384.1;Name=WP_000803384.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=CCO57_RS14655;product=LysR family transcriptional regulator;protein_id=WP_000803384.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 92696 93520 . - . ID=gene-CCO57_RS14660;Name=CCO57_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14660;old_locus_tag=CCO57_14645 NZ_NPMC01000008.1 Protein Homology CDS 92696 93520 . - 0 ID=cds-WP_094915004.1;Parent=gene-CCO57_RS14660;Dbxref=GenBank:WP_094915004.1;Name=WP_094915004.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=CCO57_RS14660;product=SDR family oxidoreductase;protein_id=WP_094915004.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 93683 93733 . + . ID=gene-CCO57_RS14665;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=CCO57_RS14665;old_locus_tag=CCO57_14650 NZ_NPMC01000008.1 Protein Homology CDS 93683 93733 . + 0 ID=cds-WP_001364200.1;Parent=gene-CCO57_RS14665;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=CCO57_RS14665;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_NPMC01000008.1 cmsearch sequence_feature 93709 93832 . + . ID=id-NZ_NPMC01000008.1:93709..93832;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMC01000008.1 RefSeq gene 93880 94779 . + . ID=gene-CCO57_RS14670;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CCO57_RS14670;old_locus_tag=CCO57_14655 NZ_NPMC01000008.1 Protein Homology CDS 93880 94779 . + 0 ID=cds-WP_000886600.1;Parent=gene-CCO57_RS14670;Dbxref=GenBank:WP_000886600.1;Name=WP_000886600.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=CCO57_RS14670;product=ATP phosphoribosyltransferase;protein_id=WP_000886600.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 94882 96186 . + . ID=gene-CCO57_RS14675;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CCO57_RS14675;old_locus_tag=CCO57_14660 NZ_NPMC01000008.1 Protein Homology CDS 94882 96186 . + 0 ID=cds-WP_094915005.1;Parent=gene-CCO57_RS14675;Dbxref=GenBank:WP_094915005.1;Name=WP_094915005.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=CCO57_RS14675;product=histidinol dehydrogenase;protein_id=WP_094915005.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 96183 97262 . + . ID=gene-CCO57_RS14680;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CCO57_RS14680;old_locus_tag=CCO57_14665 NZ_NPMC01000008.1 Protein Homology CDS 96183 97262 . + 0 ID=cds-WP_000102715.1;Parent=gene-CCO57_RS14680;Dbxref=GenBank:WP_000102715.1;Name=WP_000102715.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=CCO57_RS14680;product=histidinol-phosphate transaminase;protein_id=WP_000102715.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 97259 98326 . + . ID=gene-CCO57_RS14685;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CCO57_RS14685;old_locus_tag=CCO57_14670 NZ_NPMC01000008.1 Protein Homology CDS 97259 98326 . + 0 ID=cds-WP_000080042.1;Parent=gene-CCO57_RS14685;Dbxref=GenBank:WP_000080042.1;Name=WP_000080042.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=CCO57_RS14685;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080042.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 98326 98916 . + . ID=gene-CCO57_RS14690;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CCO57_RS14690;old_locus_tag=CCO57_14675 NZ_NPMC01000008.1 Protein Homology CDS 98326 98916 . + 0 ID=cds-WP_001103591.1;Parent=gene-CCO57_RS14690;Dbxref=GenBank:WP_001103591.1;Name=WP_001103591.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=CCO57_RS14690;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103591.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 98916 99653 . + . ID=gene-CCO57_RS14695;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CCO57_RS14695;old_locus_tag=CCO57_14680 NZ_NPMC01000008.1 Protein Homology CDS 98916 99653 . + 0 ID=cds-WP_000586409.1;Parent=gene-CCO57_RS14695;Dbxref=GenBank:WP_000586409.1;Name=WP_000586409.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=CCO57_RS14695;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586409.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 99635 100411 . + . ID=gene-CCO57_RS14700;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CCO57_RS14700;old_locus_tag=CCO57_14685 NZ_NPMC01000008.1 Protein Homology CDS 99635 100411 . + 0 ID=cds-WP_000880125.1;Parent=gene-CCO57_RS14700;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=CCO57_RS14700;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 100405 101016 . + . ID=gene-CCO57_RS14705;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CCO57_RS14705;old_locus_tag=CCO57_14690 NZ_NPMC01000008.1 Protein Homology CDS 100405 101016 . + 0 ID=cds-WP_000954847.1;Parent=gene-CCO57_RS14705;Dbxref=GenBank:WP_000954847.1;Name=WP_000954847.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=CCO57_RS14705;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954847.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 101098 102081 . - . ID=gene-CCO57_RS14710;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=CCO57_RS14710;old_locus_tag=CCO57_14695 NZ_NPMC01000008.1 Protein Homology CDS 101098 102081 . - 0 ID=cds-WP_000215266.1;Parent=gene-CCO57_RS14710;Dbxref=GenBank:WP_000215266.1;Name=WP_000215266.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=CCO57_RS14710;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_000215266.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 102224 103390 . - . ID=gene-CCO57_RS14715;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=CCO57_RS14715;old_locus_tag=CCO57_14700 NZ_NPMC01000008.1 Protein Homology CDS 102224 103390 . - 0 ID=cds-WP_094915006.1;Parent=gene-CCO57_RS14715;Dbxref=GenBank:WP_094915006.1;Name=WP_094915006.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=CCO57_RS14715;product=UDP-glucose 6-dehydrogenase;protein_id=WP_094915006.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 103627 105033 . - . ID=gene-CCO57_RS14725;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=CCO57_RS14725;old_locus_tag=CCO57_14710 NZ_NPMC01000008.1 Protein Homology CDS 103627 105033 . - 0 ID=cds-WP_000043532.1;Parent=gene-CCO57_RS14725;Dbxref=GenBank:WP_000043532.1;Name=WP_000043532.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=CCO57_RS14725;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043532.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 105169 106695 . - . ID=gene-CCO57_RS14730;Name=CCO57_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14730;old_locus_tag=CCO57_14715 NZ_NPMC01000008.1 Protein Homology CDS 105169 106695 . - 0 ID=cds-WP_023207882.1;Parent=gene-CCO57_RS14730;Dbxref=GenBank:WP_023207882.1;Name=WP_023207882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259151.1;locus_tag=CCO57_RS14730;product=hypothetical protein;protein_id=WP_023207882.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 106981 108351 . - . ID=gene-CCO57_RS14735;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=CCO57_RS14735;old_locus_tag=CCO57_14720 NZ_NPMC01000008.1 Protein Homology CDS 106981 108351 . - 0 ID=cds-WP_094915007.1;Parent=gene-CCO57_RS14735;Dbxref=GenBank:WP_094915007.1;Name=WP_094915007.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441794.1;locus_tag=CCO57_RS14735;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_094915007.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 108462 109883 . - . ID=gene-CCO57_RS14740;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=CCO57_RS14740;old_locus_tag=CCO57_14725 NZ_NPMC01000008.1 Protein Homology CDS 108462 109883 . - 0 ID=cds-WP_070800794.1;Parent=gene-CCO57_RS14740;Dbxref=GenBank:WP_070800794.1;Name=WP_070800794.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238850.1;locus_tag=CCO57_RS14740;product=mannose-1-phosphate guanyltransferase;protein_id=WP_070800794.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 109901 110683 . - . ID=gene-CCO57_RS14745;Name=CCO57_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14745;old_locus_tag=CCO57_14730 NZ_NPMC01000008.1 Protein Homology CDS 109901 110683 . - 0 ID=cds-WP_001645074.1;Parent=gene-CCO57_RS14745;Dbxref=GenBank:WP_001645074.1;Name=WP_001645074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001557072.1;locus_tag=CCO57_RS14745;product=glycosyltransferase family 2 protein;protein_id=WP_001645074.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 110680 111768 . - . ID=gene-CCO57_RS14750;Name=CCO57_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14750;old_locus_tag=CCO57_14735 NZ_NPMC01000008.1 Protein Homology CDS 110680 111768 . - 0 ID=cds-WP_235613286.1;Parent=gene-CCO57_RS14750;Dbxref=GenBank:WP_235613286.1;Name=WP_235613286.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF024831.6;locus_tag=CCO57_RS14750;product=glycosyltransferase;protein_id=WP_235613286.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 111775 112854 . - . ID=gene-CCO57_RS14755;Name=CCO57_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14755;old_locus_tag=CCO57_14740 NZ_NPMC01000008.1 Protein Homology CDS 111775 112854 . - 0 ID=cds-WP_023262739.1;Parent=gene-CCO57_RS14755;Dbxref=GenBank:WP_023262739.1;Name=WP_023262739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.6;locus_tag=CCO57_RS14755;product=O11 family O-antigen polymerase;protein_id=WP_023262739.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 112851 113951 . - . ID=gene-CCO57_RS14760;Name=CCO57_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14760;old_locus_tag=CCO57_14745 NZ_NPMC01000008.1 Protein Homology CDS 112851 113951 . - 0 ID=cds-WP_023207413.1;Parent=gene-CCO57_RS14760;Dbxref=GenBank:WP_023207413.1;Name=WP_023207413.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001557075.1;locus_tag=CCO57_RS14760;product=glycosyltransferase;protein_id=WP_023207413.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 114234 114773 . - . ID=gene-CCO57_RS14765;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=CCO57_RS14765;old_locus_tag=CCO57_14750 NZ_NPMC01000008.1 Protein Homology CDS 114234 114773 . - 0 ID=cds-WP_001645077.1;Parent=gene-CCO57_RS14765;Dbxref=GenBank:WP_001645077.1;Name=WP_001645077.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100791.1;locus_tag=CCO57_RS14765;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_001645077.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 114778 115656 . - . ID=gene-CCO57_RS14770;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CCO57_RS14770;old_locus_tag=CCO57_14755 NZ_NPMC01000008.1 Protein Homology CDS 114778 115656 . - 0 ID=cds-WP_001645078.1;Parent=gene-CCO57_RS14770;Dbxref=GenBank:WP_001645078.1;Name=WP_001645078.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707934.1;locus_tag=CCO57_RS14770;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_001645078.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 115704 116603 . - . ID=gene-CCO57_RS14775;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=CCO57_RS14775;old_locus_tag=CCO57_14760 NZ_NPMC01000008.1 Protein Homology CDS 115704 116603 . - 0 ID=cds-WP_001023664.1;Parent=gene-CCO57_RS14775;Dbxref=GenBank:WP_001023664.1;Name=WP_001023664.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=CCO57_RS14775;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023664.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 116603 117688 . - . ID=gene-CCO57_RS14780;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=CCO57_RS14780;old_locus_tag=CCO57_14765 NZ_NPMC01000008.1 Protein Homology CDS 116603 117688 . - 0 ID=cds-WP_094915008.1;Parent=gene-CCO57_RS14780;Dbxref=GenBank:WP_094915008.1;Name=WP_094915008.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=CCO57_RS14780;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_094915008.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 118065 118958 . - . ID=gene-CCO57_RS14785;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=CCO57_RS14785;old_locus_tag=CCO57_14770 NZ_NPMC01000008.1 Protein Homology CDS 118065 118958 . - 0 ID=cds-WP_023194346.1;Parent=gene-CCO57_RS14785;Dbxref=GenBank:WP_023194346.1;Name=WP_023194346.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=CCO57_RS14785;product=GalU regulator GalF;protein_id=WP_023194346.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 119136 120539 . - . ID=gene-CCO57_RS14790;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=CCO57_RS14790;old_locus_tag=CCO57_14775 NZ_NPMC01000008.1 Protein Homology CDS 119136 120539 . - 0 ID=cds-WP_001656553.1;Parent=gene-CCO57_RS14790;Dbxref=GenBank:WP_001656553.1;Name=WP_001656553.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=CCO57_RS14790;product=colanic acid biosynthesis protein WcaM;protein_id=WP_001656553.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 120550 121770 . - . ID=gene-CCO57_RS14795;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=CCO57_RS14795;old_locus_tag=CCO57_14780 NZ_NPMC01000008.1 Protein Homology CDS 120550 121770 . - 0 ID=cds-WP_086776933.1;Parent=gene-CCO57_RS14795;Dbxref=GenBank:WP_086776933.1;Name=WP_086776933.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=CCO57_RS14795;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_086776933.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 121767 123047 . - . ID=gene-CCO57_RS14800;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=CCO57_RS14800;old_locus_tag=CCO57_14785 NZ_NPMC01000008.1 Protein Homology CDS 121767 123047 . - 0 ID=cds-WP_079982284.1;Parent=gene-CCO57_RS14800;Dbxref=GenBank:WP_079982284.1;Name=WP_079982284.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=CCO57_RS14800;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_079982284.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 123069 124547 . - . ID=gene-CCO57_RS14805;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=CCO57_RS14805;old_locus_tag=CCO57_14790 NZ_NPMC01000008.1 Protein Homology CDS 123069 124547 . - 0 ID=cds-WP_000058682.1;Parent=gene-CCO57_RS14805;Dbxref=GenBank:WP_000058682.1;Name=WP_000058682.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=CCO57_RS14805;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_000058682.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 124680 126074 . - . ID=gene-CCO57_RS14810;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=CCO57_RS14810;old_locus_tag=CCO57_14795 NZ_NPMC01000008.1 Protein Homology CDS 124680 126074 . - 0 ID=cds-WP_086776754.1;Parent=gene-CCO57_RS14810;Dbxref=GenBank:WP_086776754.1;Name=WP_086776754.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=CCO57_RS14810;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_086776754.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 126128 127498 . - . ID=gene-CCO57_RS14815;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=CCO57_RS14815;old_locus_tag=CCO57_14800 NZ_NPMC01000008.1 Protein Homology CDS 126128 127498 . - 0 ID=cds-WP_052909136.1;Parent=gene-CCO57_RS14815;Dbxref=GenBank:WP_052909136.1;Name=WP_052909136.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=CCO57_RS14815;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_052909136.1;transl_table=11 NZ_NPMC01000008.1 RefSeq pseudogene 127609 129045 . - . ID=gene-CCO57_RS14820;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=pseudogene;locus_tag=CCO57_RS14820;old_locus_tag=CCO57_14805;pseudo=true NZ_NPMC01000008.1 Protein Homology CDS 127609 129045 . - 0 ID=cds-CCO57_RS14820;Parent=gene-CCO57_RS14820;Note=internal stop;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310881.1;locus_tag=CCO57_RS14820;product=mannose-1-phosphate guanyltransferase;pseudo=true;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 129048 130271 . - . ID=gene-CCO57_RS14825;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=CCO57_RS14825;old_locus_tag=CCO57_14810 NZ_NPMC01000008.1 Protein Homology CDS 129048 130271 . - 0 ID=cds-WP_023252071.1;Parent=gene-CCO57_RS14825;Dbxref=GenBank:WP_023252071.1;Name=WP_023252071.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=CCO57_RS14825;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_023252071.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 130268 130741 . - . ID=gene-CCO57_RS14830;Name=CCO57_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14830;old_locus_tag=CCO57_14815 NZ_NPMC01000008.1 Protein Homology CDS 130268 130741 . - 0 ID=cds-WP_023243991.1;Parent=gene-CCO57_RS14830;Dbxref=GenBank:WP_023243991.1;Name=WP_023243991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=CCO57_RS14830;product=GDP-mannose mannosyl hydrolase;protein_id=WP_023243991.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 130744 131709 . - . ID=gene-CCO57_RS14835;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=CCO57_RS14835;old_locus_tag=CCO57_14820 NZ_NPMC01000008.1 Protein Homology CDS 130744 131709 . - 0 ID=cds-WP_001041701.1;Parent=gene-CCO57_RS14835;Dbxref=GenBank:WP_001041701.1;Name=WP_001041701.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=CCO57_RS14835;product=GDP-L-fucose synthase;protein_id=WP_001041701.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 131712 132833 . - . ID=gene-CCO57_RS14840;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CCO57_RS14840;old_locus_tag=CCO57_14825 NZ_NPMC01000008.1 Protein Homology CDS 131712 132833 . - 0 ID=cds-WP_000048160.1;Parent=gene-CCO57_RS14840;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=CCO57_RS14840;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 132857 133411 . - . ID=gene-CCO57_RS14845;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=CCO57_RS14845;old_locus_tag=CCO57_14830 NZ_NPMC01000008.1 Protein Homology CDS 132857 133411 . - 0 ID=cds-WP_094915009.1;Parent=gene-CCO57_RS14845;Dbxref=GenBank:WP_094915009.1;Name=WP_094915009.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=CCO57_RS14845;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_094915009.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 133427 134173 . - . ID=gene-CCO57_RS14850;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=CCO57_RS14850;old_locus_tag=CCO57_14835 NZ_NPMC01000008.1 Protein Homology CDS 133427 134173 . - 0 ID=cds-WP_088730355.1;Parent=gene-CCO57_RS14850;Dbxref=GenBank:WP_088730355.1;Name=WP_088730355.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=CCO57_RS14850;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_088730355.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 134186 135400 . - . ID=gene-CCO57_RS14855;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=CCO57_RS14855;old_locus_tag=CCO57_14840 NZ_NPMC01000008.1 Protein Homology CDS 134186 135400 . - 0 ID=cds-WP_094915010.1;Parent=gene-CCO57_RS14855;Dbxref=GenBank:WP_094915010.1;Name=WP_094915010.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=CCO57_RS14855;product=colanic acid polymerase WcaD;protein_id=WP_094915010.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 135375 136592 . - . ID=gene-CCO57_RS14860;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=CCO57_RS14860;old_locus_tag=CCO57_14845 NZ_NPMC01000008.1 Protein Homology CDS 135375 136592 . - 0 ID=cds-WP_001023832.1;Parent=gene-CCO57_RS14860;Dbxref=GenBank:WP_001023832.1;Name=WP_001023832.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=CCO57_RS14860;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023832.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 136589 137077 . - . ID=gene-CCO57_RS14865;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=CCO57_RS14865;old_locus_tag=CCO57_14850 NZ_NPMC01000008.1 Protein Homology CDS 136589 137077 . - 0 ID=cds-WP_000888724.1;Parent=gene-CCO57_RS14865;Dbxref=GenBank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=CCO57_RS14865;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 137080 137922 . - . ID=gene-CCO57_RS14870;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=CCO57_RS14870;old_locus_tag=CCO57_14855 NZ_NPMC01000008.1 Protein Homology CDS 137080 137922 . - 0 ID=cds-WP_000205695.1;Parent=gene-CCO57_RS14870;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=CCO57_RS14870;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 138009 140168 . - . ID=gene-CCO57_RS14875;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=CCO57_RS14875;old_locus_tag=CCO57_14860 NZ_NPMC01000008.1 Protein Homology CDS 138009 140168 . - 0 ID=cds-WP_094915011.1;Parent=gene-CCO57_RS14875;Dbxref=GenBank:WP_094915011.1;Name=WP_094915011.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=CCO57_RS14875;product=tyrosine-protein kinase Wzc;protein_id=WP_094915011.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 140165 140614 . - . ID=gene-CCO57_RS14880;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=CCO57_RS14880;old_locus_tag=CCO57_14865 NZ_NPMC01000008.1 Protein Homology CDS 140165 140614 . - 0 ID=cds-WP_000482224.1;Parent=gene-CCO57_RS14880;Dbxref=GenBank:WP_000482224.1;Name=WP_000482224.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=CCO57_RS14880;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482224.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 140620 141759 . - . ID=gene-CCO57_RS14885;Name=CCO57_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14885;old_locus_tag=CCO57_14870 NZ_NPMC01000008.1 Protein Homology CDS 140620 141759 . - 0 ID=cds-WP_094915012.1;Parent=gene-CCO57_RS14885;Dbxref=GenBank:WP_094915012.1;Name=WP_094915012.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=CCO57_RS14885;product=polysaccharide export protein;protein_id=WP_094915012.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 142433 144013 . + . ID=gene-CCO57_RS14895;Name=CCO57_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14895;old_locus_tag=CCO57_14880 NZ_NPMC01000008.1 Protein Homology CDS 142433 144013 . + 0 ID=cds-WP_023197520.1;Parent=gene-CCO57_RS14895;Dbxref=GenBank:WP_023197520.1;Name=WP_023197520.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=CCO57_RS14895;product=TerC family protein;protein_id=WP_023197520.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 144099 145955 . - . ID=gene-CCO57_RS14900;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=CCO57_RS14900;old_locus_tag=CCO57_14885 NZ_NPMC01000008.1 Protein Homology CDS 144099 145955 . - 0 ID=cds-WP_094915013.1;Parent=gene-CCO57_RS14900;Dbxref=GenBank:WP_094915013.1;Name=WP_094915013.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=CCO57_RS14900;product=outer membrane assembly protein AsmA;protein_id=WP_094915013.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 145994 146575 . - . ID=gene-CCO57_RS14905;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CCO57_RS14905;old_locus_tag=CCO57_14890 NZ_NPMC01000008.1 Protein Homology CDS 145994 146575 . - 0 ID=cds-WP_001234783.1;Parent=gene-CCO57_RS14905;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=CCO57_RS14905;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 146666 147307 . - . ID=gene-CCO57_RS14910;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CCO57_RS14910;old_locus_tag=CCO57_14895 NZ_NPMC01000008.1 Protein Homology CDS 146666 147307 . - 0 ID=cds-WP_000132082.1;Parent=gene-CCO57_RS14910;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=CCO57_RS14910;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 147638 150628 . + . ID=gene-CCO57_RS14915;Name=CCO57_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14915;old_locus_tag=CCO57_14900 NZ_NPMC01000008.1 Protein Homology CDS 147638 150628 . + 0 ID=cds-WP_000042964.1;Parent=gene-CCO57_RS14915;Dbxref=GenBank:WP_000042964.1;Name=WP_000042964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=CCO57_RS14915;product=MASE1 domain-containing protein;protein_id=WP_000042964.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 150596 151465 . - . ID=gene-CCO57_RS14920;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=CCO57_RS14920;old_locus_tag=CCO57_14905 NZ_NPMC01000008.1 Protein Homology CDS 150596 151465 . - 0 ID=cds-WP_000494711.1;Parent=gene-CCO57_RS14920;Dbxref=GenBank:WP_000494711.1;Name=WP_000494711.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=CCO57_RS14920;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000494711.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 151599 152951 . + . ID=gene-CCO57_RS14930;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=CCO57_RS14930;old_locus_tag=CCO57_14915 NZ_NPMC01000008.1 Protein Homology CDS 151599 152951 . + 0 ID=cds-WP_000469626.1;Parent=gene-CCO57_RS14930;Dbxref=GenBank:WP_000469626.1;Name=WP_000469626.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=CCO57_RS14930;product=molecular chaperone;protein_id=WP_000469626.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 153050 153109 . - . ID=gene-CCO57_RS24120;Name=CCO57_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24120 NZ_NPMC01000008.1 Protein Homology CDS 153050 153109 . - 0 ID=cds-WP_105887528.1;Parent=gene-CCO57_RS24120;Dbxref=GenBank:WP_105887528.1;Name=WP_105887528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=CCO57_RS24120;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_105887528.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 153392 154633 . + . ID=gene-CCO57_RS14935;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=CCO57_RS14935;old_locus_tag=CCO57_14920 NZ_NPMC01000008.1 Protein Homology CDS 153392 154633 . + 0 ID=cds-WP_000678803.1;Parent=gene-CCO57_RS14935;Dbxref=GenBank:WP_000678803.1;Name=WP_000678803.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=CCO57_RS14935;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678803.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 154633 157755 . + . ID=gene-CCO57_RS14940;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=CCO57_RS14940;old_locus_tag=CCO57_14925 NZ_NPMC01000008.1 Protein Homology CDS 154633 157755 . + 0 ID=cds-WP_094915014.1;Parent=gene-CCO57_RS14940;Dbxref=GenBank:WP_094915014.1;Name=WP_094915014.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=CCO57_RS14940;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_094915014.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 157756 160836 . + . ID=gene-CCO57_RS14945;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=CCO57_RS14945;old_locus_tag=CCO57_14930 NZ_NPMC01000008.1 Protein Homology CDS 157756 160836 . + 0 ID=cds-WP_001210092.1;Parent=gene-CCO57_RS14945;Dbxref=GenBank:WP_001210092.1;Name=WP_001210092.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=CCO57_RS14945;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_001210092.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 160833 162245 . + . ID=gene-CCO57_RS14950;Name=CCO57_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14950;old_locus_tag=CCO57_14935 NZ_NPMC01000008.1 Protein Homology CDS 160833 162245 . + 0 ID=cds-WP_000137815.1;Parent=gene-CCO57_RS14950;Dbxref=GenBank:WP_000137815.1;Name=WP_000137815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=CCO57_RS14950;product=MFS transporter;protein_id=WP_000137815.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 162245 163648 . + . ID=gene-CCO57_RS14955;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=CCO57_RS14955;old_locus_tag=CCO57_14940 NZ_NPMC01000008.1 Protein Homology CDS 162245 163648 . + 0 ID=cds-WP_000870081.1;Parent=gene-CCO57_RS14955;Dbxref=GenBank:WP_000870081.1;Name=WP_000870081.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=CCO57_RS14955;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000870081.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 163645 164367 . + . ID=gene-CCO57_RS14960;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=CCO57_RS14960;old_locus_tag=CCO57_14945 NZ_NPMC01000008.1 Protein Homology CDS 163645 164367 . + 0 ID=cds-WP_000137854.1;Parent=gene-CCO57_RS14960;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=CCO57_RS14960;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 164636 165838 . + . ID=gene-CCO57_RS14970;Name=CCO57_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14970;old_locus_tag=CCO57_14955 NZ_NPMC01000008.1 Protein Homology CDS 164636 165838 . + 0 ID=cds-WP_000141073.1;Parent=gene-CCO57_RS14970;Dbxref=GenBank:WP_000141073.1;Name=WP_000141073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141079.1;locus_tag=CCO57_RS14970;product=hypothetical protein;protein_id=WP_000141073.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 165838 166554 . + . ID=gene-CCO57_RS14975;Name=CCO57_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14975;old_locus_tag=CCO57_14960 NZ_NPMC01000008.1 Protein Homology CDS 165838 166554 . + 0 ID=cds-WP_094915015.1;Parent=gene-CCO57_RS14975;Dbxref=GenBank:WP_094915015.1;Name=WP_094915015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=CCO57_RS14975;product=DUF1266 domain-containing protein;protein_id=WP_094915015.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 166565 168676 . + . ID=gene-CCO57_RS14980;Name=CCO57_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14980;old_locus_tag=CCO57_14965 NZ_NPMC01000008.1 Protein Homology CDS 166565 168676 . + 0 ID=cds-WP_094915016.1;Parent=gene-CCO57_RS14980;Dbxref=GenBank:WP_094915016.1;Name=WP_094915016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=CCO57_RS14980;product=DUF4034 domain-containing protein;protein_id=WP_094915016.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 168792 170153 . + . ID=gene-CCO57_RS14985;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=CCO57_RS14985;old_locus_tag=CCO57_14970 NZ_NPMC01000008.1 Protein Homology CDS 168792 170153 . + 0 ID=cds-WP_001517981.1;Parent=gene-CCO57_RS14985;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=CCO57_RS14985;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_001517981.1;transl_table=11 NZ_NPMC01000008.1 RefSeq pseudogene 170605 170784 . + . ID=gene-CCO57_RS14990;Name=CCO57_RS14990;end_range=170784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS14990;old_locus_tag=CCO57_14975;partial=true;pseudo=true NZ_NPMC01000008.1 Protein Homology CDS 170605 170784 . + 0 ID=cds-CCO57_RS14990;Parent=gene-CCO57_RS14990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=170784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=CCO57_RS14990;partial=true;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 170794 171210 . - . ID=gene-CCO57_RS14995;Name=CCO57_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS14995;old_locus_tag=CCO57_14980 NZ_NPMC01000008.1 Protein Homology CDS 170794 171210 . - 0 ID=cds-WP_001543023.1;Parent=gene-CCO57_RS14995;Dbxref=GenBank:WP_001543023.1;Name=WP_001543023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=CCO57_RS14995;product=CesT family type III secretion system chaperone;protein_id=WP_001543023.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 171332 171667 . - . ID=gene-CCO57_RS15000;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=CCO57_RS15000;old_locus_tag=CCO57_14985 NZ_NPMC01000008.1 Protein Homology CDS 171332 171667 . - 0 ID=cds-WP_001612048.1;Parent=gene-CCO57_RS15000;Dbxref=GenBank:WP_001612048.1;Name=WP_001612048.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=CCO57_RS15000;product=type III secretion system effector SteD;protein_id=WP_001612048.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 172226 173125 . + . ID=gene-CCO57_RS15005;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=CCO57_RS15005;old_locus_tag=CCO57_14990 NZ_NPMC01000008.1 Protein Homology CDS 172226 173125 . + 0 ID=cds-WP_001273393.1;Parent=gene-CCO57_RS15005;Dbxref=GenBank:WP_001273393.1;Name=WP_001273393.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=CCO57_RS15005;product=lipid kinase YegS;protein_id=WP_001273393.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 173178 174230 . - . ID=gene-CCO57_RS15010;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=CCO57_RS15010;old_locus_tag=CCO57_14995 NZ_NPMC01000008.1 Protein Homology CDS 173178 174230 . - 0 ID=cds-WP_000129590.1;Parent=gene-CCO57_RS15010;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=CCO57_RS15010;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 174484 175755 . + . ID=gene-CCO57_RS15015;Name=CCO57_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15015;old_locus_tag=CCO57_15000 NZ_NPMC01000008.1 Protein Homology CDS 174484 175755 . + 0 ID=cds-WP_000858692.1;Parent=gene-CCO57_RS15015;Dbxref=GenBank:WP_000858692.1;Name=WP_000858692.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=CCO57_RS15015;product=nucleoside permease;protein_id=WP_000858692.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 175752 176756 . + . ID=gene-CCO57_RS15020;Name=CCO57_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15020;old_locus_tag=CCO57_15005 NZ_NPMC01000008.1 Protein Homology CDS 175752 176756 . + 0 ID=cds-WP_094915017.1;Parent=gene-CCO57_RS15020;Dbxref=GenBank:WP_094915017.1;Name=WP_094915017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=CCO57_RS15020;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_094915017.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 176753 177718 . + . ID=gene-CCO57_RS15025;Name=CCO57_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15025;old_locus_tag=CCO57_15010 NZ_NPMC01000008.1 Protein Homology CDS 176753 177718 . + 0 ID=cds-WP_000012011.1;Parent=gene-CCO57_RS15025;Dbxref=GenBank:WP_000012011.1;Name=WP_000012011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=CCO57_RS15025;product=PfkB family carbohydrate kinase;protein_id=WP_000012011.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 177692 178438 . - . ID=gene-CCO57_RS15030;Name=CCO57_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15030;old_locus_tag=CCO57_15015 NZ_NPMC01000008.1 Protein Homology CDS 177692 178438 . - 0 ID=cds-WP_000434059.1;Parent=gene-CCO57_RS15030;Dbxref=GenBank:WP_000434059.1;Name=WP_000434059.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=CCO57_RS15030;product=GntR family transcriptional regulator;protein_id=WP_000434059.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 178474 179274 . - . ID=gene-CCO57_RS15035;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CCO57_RS15035;old_locus_tag=CCO57_15020 NZ_NPMC01000008.1 Protein Homology CDS 178474 179274 . - 0 ID=cds-WP_000822248.1;Parent=gene-CCO57_RS15035;Dbxref=GenBank:WP_000822248.1;Name=WP_000822248.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=CCO57_RS15035;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000822248.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 179261 180058 . - . ID=gene-CCO57_RS15040;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CCO57_RS15040;old_locus_tag=CCO57_15025 NZ_NPMC01000008.1 Protein Homology CDS 179261 180058 . - 0 ID=cds-WP_094915018.1;Parent=gene-CCO57_RS15040;Dbxref=GenBank:WP_094915018.1;Name=WP_094915018.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=CCO57_RS15040;product=hydroxyethylthiazole kinase;protein_id=WP_094915018.1;transl_table=11 NZ_NPMC01000008.1 cmsearch riboswitch 180090 180186 . - . ID=id-NZ_NPMC01000008.1:180090..180186;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMC01000008.1 RefSeq gene 180468 180782 . + . ID=gene-CCO57_RS15045;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=CCO57_RS15045;old_locus_tag=CCO57_15030 NZ_NPMC01000008.1 Protein Homology CDS 180468 180782 . + 0 ID=cds-WP_000837534.1;Parent=gene-CCO57_RS15045;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=CCO57_RS15045;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 180826 181848 . - . ID=gene-CCO57_RS15050;Name=CCO57_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15050;old_locus_tag=CCO57_15035 NZ_NPMC01000008.1 Protein Homology CDS 180826 181848 . - 0 ID=cds-WP_000825909.1;Parent=gene-CCO57_RS15050;Dbxref=GenBank:WP_000825909.1;Name=WP_000825909.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=CCO57_RS15050;product=fimbrial protein;protein_id=WP_000825909.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 181864 184350 . - . ID=gene-CCO57_RS15055;Name=CCO57_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15055;old_locus_tag=CCO57_15040 NZ_NPMC01000008.1 Protein Homology CDS 181864 184350 . - 0 ID=cds-WP_023231101.1;Parent=gene-CCO57_RS15055;Dbxref=GenBank:WP_023231101.1;Name=WP_023231101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=CCO57_RS15055;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_023231101.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 184379 185059 . - . ID=gene-CCO57_RS15060;Name=CCO57_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15060;old_locus_tag=CCO57_15045 NZ_NPMC01000008.1 Protein Homology CDS 184379 185059 . - 0 ID=cds-WP_000827109.1;Parent=gene-CCO57_RS15060;Dbxref=GenBank:WP_000827109.1;Name=WP_000827109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=CCO57_RS15060;product=fimbrial assembly chaperone;protein_id=WP_000827109.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 185121 185654 . - . ID=gene-CCO57_RS15065;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=CCO57_RS15065;old_locus_tag=CCO57_15050 NZ_NPMC01000008.1 Protein Homology CDS 185121 185654 . - 0 ID=cds-WP_000830680.1;Parent=gene-CCO57_RS15065;Dbxref=GenBank:WP_000830680.1;Name=WP_000830680.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=CCO57_RS15065;product=fimbrial protein YehD;protein_id=WP_000830680.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 185935 186216 . - . ID=gene-CCO57_RS15070;Name=CCO57_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15070;old_locus_tag=CCO57_15055 NZ_NPMC01000008.1 Protein Homology CDS 185935 186216 . - 0 ID=cds-WP_000760404.1;Parent=gene-CCO57_RS15070;Dbxref=GenBank:WP_000760404.1;Name=WP_000760404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=CCO57_RS15070;product=YehE family protein;protein_id=WP_000760404.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 186494 187603 . - . ID=gene-CCO57_RS15075;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=CCO57_RS15075;old_locus_tag=CCO57_15060 NZ_NPMC01000008.1 Protein Homology CDS 186494 187603 . - 0 ID=cds-WP_001005425.1;Parent=gene-CCO57_RS15075;Dbxref=GenBank:WP_001005425.1;Name=WP_001005425.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=CCO57_RS15075;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005425.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 187768 189801 . + . ID=gene-CCO57_RS15080;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CCO57_RS15080;old_locus_tag=CCO57_15065 NZ_NPMC01000008.1 Protein Homology CDS 187768 189801 . + 0 ID=cds-WP_000195345.1;Parent=gene-CCO57_RS15080;Dbxref=GenBank:WP_000195345.1;Name=WP_000195345.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=CCO57_RS15080;product=methionine--tRNA ligase;protein_id=WP_000195345.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 190043 190501 . + . ID=gene-CCO57_RS15085;Name=CCO57_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15085;old_locus_tag=CCO57_15070 NZ_NPMC01000008.1 Protein Homology CDS 190043 190501 . + 0 ID=cds-WP_000703136.1;Parent=gene-CCO57_RS15085;Dbxref=GenBank:WP_000703136.1;Name=WP_000703136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=CCO57_RS15085;product=YehR family lipoprotein;protein_id=WP_000703136.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 190673 191203 . + . ID=gene-CCO57_RS15090;Name=CCO57_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15090;old_locus_tag=CCO57_15075 NZ_NPMC01000008.1 Protein Homology CDS 190673 191203 . + 0 ID=cds-WP_001221798.1;Parent=gene-CCO57_RS15090;Dbxref=GenBank:WP_001221798.1;Name=WP_001221798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=CCO57_RS15090;product=YehR family lipoprotein;protein_id=WP_001221798.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 191260 191727 . - . ID=gene-CCO57_RS15095;Name=CCO57_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15095;old_locus_tag=CCO57_15080 NZ_NPMC01000008.1 Protein Homology CDS 191260 191727 . - 0 ID=cds-WP_000950413.1;Parent=gene-CCO57_RS15095;Dbxref=GenBank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=CCO57_RS15095;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 191774 192493 . - . ID=gene-CCO57_RS15100;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=CCO57_RS15100;old_locus_tag=CCO57_15085 NZ_NPMC01000008.1 Protein Homology CDS 191774 192493 . - 0 ID=cds-WP_000598637.1;Parent=gene-CCO57_RS15100;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=CCO57_RS15100;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 192490 194175 . - . ID=gene-CCO57_RS15105;Name=CCO57_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15105;old_locus_tag=CCO57_15090 NZ_NPMC01000008.1 Protein Homology CDS 192490 194175 . - 0 ID=cds-WP_000272850.1;Parent=gene-CCO57_RS15105;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=CCO57_RS15105;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 194398 195129 . + . ID=gene-CCO57_RS15110;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=CCO57_RS15110;old_locus_tag=CCO57_15095 NZ_NPMC01000008.1 Protein Homology CDS 194398 195129 . + 0 ID=cds-WP_001240418.1;Parent=gene-CCO57_RS15110;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=CCO57_RS15110;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 195189 195296 . + . ID=gene-CCO57_RS15115;Name=CCO57_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15115;old_locus_tag=CCO57_15100 NZ_NPMC01000008.1 Protein Homology CDS 195189 195296 . + 0 ID=cds-WP_001261696.1;Parent=gene-CCO57_RS15115;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=CCO57_RS15115;product=protein YohO;protein_id=WP_001261696.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 195277 196008 . - . ID=gene-CCO57_RS15120;Name=CCO57_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15120;old_locus_tag=CCO57_15105 NZ_NPMC01000008.1 Protein Homology CDS 195277 196008 . - 0 ID=cds-WP_000824854.1;Parent=gene-CCO57_RS15120;Dbxref=GenBank:WP_000824854.1;Name=WP_000824854.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=CCO57_RS15120;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 195992 196939 . - . ID=gene-CCO57_RS15125;Name=CCO57_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15125;old_locus_tag=CCO57_15110 NZ_NPMC01000008.1 Protein Homology CDS 195992 196939 . - 0 ID=cds-WP_000569166.1;Parent=gene-CCO57_RS15125;Dbxref=GenBank:WP_000569166.1;Name=WP_000569166.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=CCO57_RS15125;product=ABC transporter ATP-binding protein;protein_id=WP_000569166.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 196932 198101 . - . ID=gene-CCO57_RS15130;Name=CCO57_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15130;old_locus_tag=CCO57_15115 NZ_NPMC01000008.1 Protein Homology CDS 196932 198101 . - 0 ID=cds-WP_001278113.1;Parent=gene-CCO57_RS15130;Dbxref=GenBank:WP_001278113.1;Name=WP_001278113.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=CCO57_RS15130;product=ABC transporter permease;protein_id=WP_001278113.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 198105 199022 . - . ID=gene-CCO57_RS15135;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=CCO57_RS15135;old_locus_tag=CCO57_15120 NZ_NPMC01000008.1 Protein Homology CDS 198105 199022 . - 0 ID=cds-WP_000155876.1;Parent=gene-CCO57_RS15135;Dbxref=GenBank:WP_000155876.1;Name=WP_000155876.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=CCO57_RS15135;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155876.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 199203 201500 . - . ID=gene-CCO57_RS15140;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=CCO57_RS15140;old_locus_tag=CCO57_15125 NZ_NPMC01000008.1 Protein Homology CDS 199203 201500 . - 0 ID=cds-WP_000871545.1;Parent=gene-CCO57_RS15140;Dbxref=GenBank:WP_000871545.1;Name=WP_000871545.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=CCO57_RS15140;product=beta-glucosidase BglX;protein_id=WP_000871545.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 201767 203497 . + . ID=gene-CCO57_RS15145;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=CCO57_RS15145;old_locus_tag=CCO57_15130 NZ_NPMC01000008.1 Protein Homology CDS 201767 203497 . + 0 ID=cds-WP_000095231.1;Parent=gene-CCO57_RS15145;Dbxref=GenBank:WP_000095231.1;Name=WP_000095231.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=CCO57_RS15145;product=D-lactate dehydrogenase;protein_id=WP_000095231.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 203556 204503 . - . ID=gene-CCO57_RS15150;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=CCO57_RS15150;old_locus_tag=CCO57_15135 NZ_NPMC01000008.1 Protein Homology CDS 203556 204503 . - 0 ID=cds-WP_000911551.1;Parent=gene-CCO57_RS15150;Dbxref=GenBank:WP_000911551.1;Name=WP_000911551.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=CCO57_RS15150;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911551.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 204669 205256 . - . ID=gene-CCO57_RS15160;Name=CCO57_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15160;old_locus_tag=CCO57_15145 NZ_NPMC01000008.1 Protein Homology CDS 204669 205256 . - 0 ID=cds-WP_001017057.1;Parent=gene-CCO57_RS15160;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=CCO57_RS15160;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 205415 205984 . + . ID=gene-CCO57_RS15165;Name=CCO57_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15165;old_locus_tag=CCO57_15150 NZ_NPMC01000008.1 Protein Homology CDS 205415 205984 . + 0 ID=cds-WP_001530335.1;Parent=gene-CCO57_RS15165;Dbxref=GenBank:WP_001530335.1;Name=WP_001530335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=CCO57_RS15165;product=DedA family protein;protein_id=WP_001530335.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 206032 206793 . - . ID=gene-CCO57_RS15170;Name=CCO57_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15170;old_locus_tag=CCO57_15155 NZ_NPMC01000008.1 Protein Homology CDS 206032 206793 . - 0 ID=cds-WP_000169617.1;Parent=gene-CCO57_RS15170;Dbxref=GenBank:WP_000169617.1;Name=WP_000169617.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=CCO57_RS15170;product=SDR family oxidoreductase;protein_id=WP_000169617.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 206859 208295 . - . ID=gene-CCO57_RS15175;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=CCO57_RS15175;old_locus_tag=CCO57_15160 NZ_NPMC01000008.1 Protein Homology CDS 206859 208295 . - 0 ID=cds-WP_001081457.1;Parent=gene-CCO57_RS15175;Dbxref=GenBank:WP_001081457.1;Name=WP_001081457.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=CCO57_RS15175;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081457.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 208613 208696 . + . ID=gene-CCO57_RS15180;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=CCO57_RS15180;old_locus_tag=CCO57_15165 NZ_NPMC01000008.1 Protein Homology CDS 208613 208696 . + 0 ID=cds-WP_000698460.1;Parent=gene-CCO57_RS15180;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=CCO57_RS15180;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 208754 209692 . - . ID=gene-CCO57_RS15185;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=CCO57_RS15185;old_locus_tag=CCO57_15170 NZ_NPMC01000008.1 Protein Homology CDS 208754 209692 . - 0 ID=cds-WP_001264834.1;Parent=gene-CCO57_RS15185;Dbxref=GenBank:WP_001264834.1;Name=WP_001264834.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=CCO57_RS15185;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264834.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 209801 210994 . - . ID=gene-CCO57_RS15190;Name=CCO57_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15190;old_locus_tag=CCO57_15175 NZ_NPMC01000008.1 Protein Homology CDS 209801 210994 . - 0 ID=cds-WP_000150099.1;Parent=gene-CCO57_RS15190;Dbxref=GenBank:WP_000150099.1;Name=WP_000150099.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=CCO57_RS15190;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150099.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 211009 211653 . - . ID=gene-CCO57_RS15195;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=CCO57_RS15195;old_locus_tag=CCO57_15180 NZ_NPMC01000008.1 Protein Homology CDS 211009 211653 . - 0 ID=cds-WP_000781187.1;Parent=gene-CCO57_RS15195;Dbxref=GenBank:WP_000781187.1;Name=WP_000781187.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=CCO57_RS15195;product=maleylacetoacetate isomerase;protein_id=WP_000781187.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 211662 212363 . - . ID=gene-CCO57_RS15200;Name=CCO57_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15200;old_locus_tag=CCO57_15185 NZ_NPMC01000008.1 Protein Homology CDS 211662 212363 . - 0 ID=cds-WP_000170628.1;Parent=gene-CCO57_RS15200;Dbxref=GenBank:WP_000170628.1;Name=WP_000170628.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=CCO57_RS15200;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170628.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 212379 213416 . - . ID=gene-CCO57_RS15205;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=CCO57_RS15205;old_locus_tag=CCO57_15190 NZ_NPMC01000008.1 Protein Homology CDS 212379 213416 . - 0 ID=cds-WP_001289857.1;Parent=gene-CCO57_RS15205;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=CCO57_RS15205;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 213428 214786 . - . ID=gene-CCO57_RS15210;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=CCO57_RS15210;old_locus_tag=CCO57_15195 NZ_NPMC01000008.1 Protein Homology CDS 213428 214786 . - 0 ID=cds-WP_000194217.1;Parent=gene-CCO57_RS15210;Dbxref=GenBank:WP_000194217.1;Name=WP_000194217.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=CCO57_RS15210;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_000194217.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 214912 215820 . + . ID=gene-CCO57_RS15215;Name=CCO57_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15215;old_locus_tag=CCO57_15200 NZ_NPMC01000008.1 Protein Homology CDS 214912 215820 . + 0 ID=cds-WP_000024662.1;Parent=gene-CCO57_RS15215;Dbxref=GenBank:WP_000024662.1;Name=WP_000024662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=CCO57_RS15215;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024662.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 215952 216350 . + . ID=gene-CCO57_RS15220;Name=CCO57_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15220;old_locus_tag=CCO57_15205 NZ_NPMC01000008.1 Protein Homology CDS 215952 216350 . + 0 ID=cds-WP_000045719.1;Parent=gene-CCO57_RS15220;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=CCO57_RS15220;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 216347 217042 . + . ID=gene-CCO57_RS15225;Name=CCO57_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15225;old_locus_tag=CCO57_15210 NZ_NPMC01000008.1 Protein Homology CDS 216347 217042 . + 0 ID=cds-WP_000989296.1;Parent=gene-CCO57_RS15225;Dbxref=GenBank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=CCO57_RS15225;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 217196 218080 . + . ID=gene-CCO57_RS15230;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CCO57_RS15230;old_locus_tag=CCO57_15215 NZ_NPMC01000008.1 Protein Homology CDS 217196 218080 . + 0 ID=cds-WP_000553526.1;Parent=gene-CCO57_RS15230;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=CCO57_RS15230;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 218257 218976 . + . ID=gene-CCO57_RS15235;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=CCO57_RS15235;old_locus_tag=CCO57_15220 NZ_NPMC01000008.1 Protein Homology CDS 218257 218976 . + 0 ID=cds-WP_000920081.1;Parent=gene-CCO57_RS15235;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=CCO57_RS15235;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 218973 219218 . + . ID=gene-CCO57_RS15240;Name=CCO57_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15240;old_locus_tag=CCO57_15225 NZ_NPMC01000008.1 Protein Homology CDS 218973 219218 . + 0 ID=cds-WP_000605187.1;Parent=gene-CCO57_RS15240;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=CCO57_RS15240;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 219423 220664 . + . ID=gene-CCO57_RS15245;Name=CCO57_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15245;old_locus_tag=CCO57_15230 NZ_NPMC01000008.1 Protein Homology CDS 219423 220664 . + 0 ID=cds-WP_001136403.1;Parent=gene-CCO57_RS15245;Dbxref=GenBank:WP_001136403.1;Name=WP_001136403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=CCO57_RS15245;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001136403.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 220658 221893 . + . ID=gene-CCO57_RS15250;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=CCO57_RS15250;old_locus_tag=CCO57_15235 NZ_NPMC01000008.1 Protein Homology CDS 220658 221893 . + 0 ID=cds-WP_000956103.1;Parent=gene-CCO57_RS15250;Dbxref=GenBank:WP_000956103.1;Name=WP_000956103.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=CCO57_RS15250;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956103.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 221968 222978 . - . ID=gene-CCO57_RS15255;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=CCO57_RS15255;old_locus_tag=CCO57_15240 NZ_NPMC01000008.1 Protein Homology CDS 221968 222978 . - 0 ID=cds-WP_094915019.1;Parent=gene-CCO57_RS15255;Dbxref=GenBank:WP_094915019.1;Name=WP_094915019.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=CCO57_RS15255;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_094915019.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 222994 224514 . - . ID=gene-CCO57_RS15260;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=CCO57_RS15260;old_locus_tag=CCO57_15245 NZ_NPMC01000008.1 Protein Homology CDS 222994 224514 . - 0 ID=cds-WP_000535913.1;Parent=gene-CCO57_RS15260;Dbxref=GenBank:WP_000535913.1;Name=WP_000535913.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=CCO57_RS15260;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000535913.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 224648 225646 . - . ID=gene-CCO57_RS15265;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=CCO57_RS15265;old_locus_tag=CCO57_15250 NZ_NPMC01000008.1 Protein Homology CDS 224648 225646 . - 0 ID=cds-WP_001036937.1;Parent=gene-CCO57_RS15265;Dbxref=GenBank:WP_001036937.1;Name=WP_001036937.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=CCO57_RS15265;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036937.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 226145 227167 . - . ID=gene-CCO57_RS15270;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=CCO57_RS15270;old_locus_tag=CCO57_15255 NZ_NPMC01000008.1 Protein Homology CDS 226145 227167 . - 0 ID=cds-WP_000628634.1;Parent=gene-CCO57_RS15270;Dbxref=GenBank:WP_000628634.1;Name=WP_000628634.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=CCO57_RS15270;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628634.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 227317 228459 . - . ID=gene-CCO57_RS15275;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=CCO57_RS15275;old_locus_tag=CCO57_15260 NZ_NPMC01000008.1 Protein Homology CDS 227317 228459 . - 0 ID=cds-WP_001528497.1;Parent=gene-CCO57_RS15275;Dbxref=GenBank:WP_001528497.1;Name=WP_001528497.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=CCO57_RS15275;product=DUF418 domain-containing protein YeiB;protein_id=WP_001528497.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 228474 229142 . - . ID=gene-CCO57_RS15280;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CCO57_RS15280;old_locus_tag=CCO57_15265 NZ_NPMC01000008.1 Protein Homology CDS 228474 229142 . - 0 ID=cds-WP_001139611.1;Parent=gene-CCO57_RS15280;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=CCO57_RS15280;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 229472 230329 . + . ID=gene-CCO57_RS15290;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=CCO57_RS15290;old_locus_tag=CCO57_15275 NZ_NPMC01000008.1 Protein Homology CDS 229472 230329 . + 0 ID=cds-WP_000425479.1;Parent=gene-CCO57_RS15290;Dbxref=GenBank:WP_000425479.1;Name=WP_000425479.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=CCO57_RS15290;product=S-formylglutathione hydrolase;protein_id=WP_000425479.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 230318 230707 . - . ID=gene-CCO57_RS15295;Name=CCO57_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15295;old_locus_tag=CCO57_15280 NZ_NPMC01000008.1 Protein Homology CDS 230318 230707 . - 0 ID=cds-WP_000876817.1;Parent=gene-CCO57_RS15295;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=CCO57_RS15295;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 230712 232079 . - . ID=gene-CCO57_RS15300;Name=CCO57_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15300;old_locus_tag=CCO57_15285 NZ_NPMC01000008.1 Protein Homology CDS 230712 232079 . - 0 ID=cds-WP_001550010.1;Parent=gene-CCO57_RS15300;Dbxref=GenBank:WP_001550010.1;Name=WP_001550010.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=CCO57_RS15300;product=L-serine ammonia-lyase;protein_id=WP_001550010.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 232296 233183 . + . ID=gene-CCO57_RS15305;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO57_RS15305;old_locus_tag=CCO57_15290 NZ_NPMC01000008.1 Protein Homology CDS 232296 233183 . + 0 ID=cds-WP_094915020.1;Parent=gene-CCO57_RS15305;Dbxref=GenBank:WP_094915020.1;Name=WP_094915020.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=CCO57_RS15305;product=phosphoserine phosphatase SerB;protein_id=WP_094915020.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 233216 234538 . + . ID=gene-CCO57_RS15310;Name=CCO57_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15310;old_locus_tag=CCO57_15295 NZ_NPMC01000008.1 Protein Homology CDS 233216 234538 . + 0 ID=cds-WP_000023812.1;Parent=gene-CCO57_RS15310;Dbxref=GenBank:WP_000023812.1;Name=WP_000023812.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=CCO57_RS15310;product=MFS transporter;protein_id=WP_000023812.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 234582 236573 . - . ID=gene-CCO57_RS15315;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=CCO57_RS15315;old_locus_tag=CCO57_15300 NZ_NPMC01000008.1 Protein Homology CDS 234582 236573 . - 0 ID=cds-WP_079963497.1;Parent=gene-CCO57_RS15315;Dbxref=GenBank:WP_079963497.1;Name=WP_079963497.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=CCO57_RS15315;product=catecholate siderophore receptor CirA;protein_id=WP_079963497.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 236918 238387 . - . ID=gene-CCO57_RS15325;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=CCO57_RS15325;old_locus_tag=CCO57_15310 NZ_NPMC01000008.1 Protein Homology CDS 236918 238387 . - 0 ID=cds-WP_000534999.1;Parent=gene-CCO57_RS15325;Dbxref=GenBank:WP_000534999.1;Name=WP_000534999.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=CCO57_RS15325;product=lysine-specific permease;protein_id=WP_000534999.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 238577 239440 . - . ID=gene-CCO57_RS15330;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=CCO57_RS15330;old_locus_tag=CCO57_15315 NZ_NPMC01000008.1 Protein Homology CDS 238577 239440 . - 0 ID=cds-WP_000548316.1;Parent=gene-CCO57_RS15330;Dbxref=GenBank:WP_000548316.1;Name=WP_000548316.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=CCO57_RS15330;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548316.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 239561 240610 . + . ID=gene-CCO57_RS15335;Name=CCO57_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15335;old_locus_tag=CCO57_15320 NZ_NPMC01000008.1 Protein Homology CDS 239561 240610 . + 0 ID=cds-WP_000137967.1;Parent=gene-CCO57_RS15335;Dbxref=GenBank:WP_000137967.1;Name=WP_000137967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=CCO57_RS15335;product=YeiH family protein;protein_id=WP_000137967.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 240689 241546 . + . ID=gene-CCO57_RS15340;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=CCO57_RS15340;old_locus_tag=CCO57_15325 NZ_NPMC01000008.1 Protein Homology CDS 240689 241546 . + 0 ID=cds-WP_000873906.1;Parent=gene-CCO57_RS15340;Dbxref=GenBank:WP_000873906.1;Name=WP_000873906.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=CCO57_RS15340;product=deoxyribonuclease IV;protein_id=WP_000873906.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 241611 243299 . - . ID=gene-CCO57_RS15345;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=CCO57_RS15345;old_locus_tag=CCO57_15330 NZ_NPMC01000008.1 Protein Homology CDS 241611 243299 . - 0 ID=cds-WP_000854417.1;Parent=gene-CCO57_RS15345;Dbxref=GenBank:WP_000854417.1;Name=WP_000854417.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=CCO57_RS15345;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854417.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 243316 244254 . - . ID=gene-CCO57_RS15350;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=CCO57_RS15350;old_locus_tag=CCO57_15335 NZ_NPMC01000008.1 Protein Homology CDS 243316 244254 . - 0 ID=cds-WP_000091249.1;Parent=gene-CCO57_RS15350;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=CCO57_RS15350;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 244254 245384 . - . ID=gene-CCO57_RS15355;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=CCO57_RS15355;old_locus_tag=CCO57_15340 NZ_NPMC01000008.1 Protein Homology CDS 244254 245384 . - 0 ID=cds-WP_094915021.1;Parent=gene-CCO57_RS15355;Dbxref=GenBank:WP_094915021.1;Name=WP_094915021.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=CCO57_RS15355;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_094915021.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 245753 246934 . + . ID=gene-CCO57_RS15360;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=CCO57_RS15360;old_locus_tag=CCO57_15345 NZ_NPMC01000008.1 Protein Homology CDS 245753 246934 . + 0 ID=cds-WP_000551934.1;Parent=gene-CCO57_RS15360;Dbxref=GenBank:WP_000551934.1;Name=WP_000551934.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=CCO57_RS15360;product=sugar efflux transporter SetB;protein_id=WP_000551934.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 246999 247664 . - . ID=gene-CCO57_RS15365;Name=CCO57_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15365;old_locus_tag=CCO57_15350 NZ_NPMC01000008.1 Protein Homology CDS 246999 247664 . - 0 ID=cds-WP_094888466.1;Parent=gene-CCO57_RS15365;Dbxref=GenBank:WP_094888466.1;Name=WP_094888466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=CCO57_RS15365;product=GNVR domain-containing protein;protein_id=WP_094888466.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 247666 247788 . - . ID=gene-CCO57_RS15370;Name=CCO57_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15370;old_locus_tag=CCO57_15355 NZ_NPMC01000008.1 Protein Homology CDS 247666 247788 . - 0 ID=cds-WP_094888465.1;Parent=gene-CCO57_RS15370;Dbxref=GenBank:WP_094888465.1;Name=WP_094888465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=CCO57_RS15370;product=hypothetical protein;protein_id=WP_094888465.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 248176 248430 . - . ID=gene-CCO57_RS15375;Name=CCO57_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15375;old_locus_tag=CCO57_15360 NZ_NPMC01000008.1 Protein Homology CDS 248176 248430 . - 0 ID=cds-WP_001528509.1;Parent=gene-CCO57_RS15375;Dbxref=GenBank:WP_001528509.1;Name=WP_001528509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=CCO57_RS15375;product=YkgJ family cysteine cluster protein;protein_id=WP_001528509.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 248755 249327 . + . ID=gene-CCO57_RS15385;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=CCO57_RS15385;old_locus_tag=CCO57_15370 NZ_NPMC01000008.1 Protein Homology CDS 248755 249327 . + 0 ID=cds-WP_001136822.1;Parent=gene-CCO57_RS15385;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=CCO57_RS15385;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 249539 250525 . + . ID=gene-CCO57_RS15390;Name=CCO57_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15390;old_locus_tag=CCO57_15375 NZ_NPMC01000008.1 Protein Homology CDS 249539 250525 . + 0 ID=cds-WP_088546184.1;Parent=gene-CCO57_RS15390;Dbxref=GenBank:WP_088546184.1;Name=WP_088546184.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=CCO57_RS15390;product=CobW family GTP-binding protein;protein_id=WP_088546184.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 250555 251274 . + . ID=gene-CCO57_RS15395;Name=CCO57_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15395;old_locus_tag=CCO57_15380 NZ_NPMC01000008.1 Protein Homology CDS 250555 251274 . + 0 ID=cds-WP_000178091.1;Parent=gene-CCO57_RS15395;Dbxref=GenBank:WP_000178091.1;Name=WP_000178091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=CCO57_RS15395;product=phosphatase PAP2 family protein;protein_id=WP_000178091.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 251688 252260 . + . ID=gene-CCO57_RS15405;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=CCO57_RS15405;old_locus_tag=CCO57_15390 NZ_NPMC01000008.1 Protein Homology CDS 251688 252260 . + 0 ID=cds-WP_000241015.1;Parent=gene-CCO57_RS15405;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=CCO57_RS15405;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 252586 254142 . + . ID=gene-CCO57_RS15415;Name=CCO57_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15415;old_locus_tag=CCO57_15400 NZ_NPMC01000008.1 Protein Homology CDS 252586 254142 . + 0 ID=cds-WP_000957761.1;Parent=gene-CCO57_RS15415;Dbxref=GenBank:WP_000957761.1;Name=WP_000957761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=CCO57_RS15415;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000957761.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 254249 256054 . + . ID=gene-CCO57_RS15420;Name=CCO57_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15420;old_locus_tag=CCO57_15405 NZ_NPMC01000008.1 Protein Homology CDS 254249 256054 . + 0 ID=cds-WP_000561742.1;Parent=gene-CCO57_RS15420;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=CCO57_RS15420;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 256064 257158 . + . ID=gene-CCO57_RS15425;Name=CCO57_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15425;old_locus_tag=CCO57_15410 NZ_NPMC01000008.1 Protein Homology CDS 256064 257158 . + 0 ID=cds-WP_001656701.1;Parent=gene-CCO57_RS15425;Dbxref=GenBank:WP_001656701.1;Name=WP_001656701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=CCO57_RS15425;product=microcin C ABC transporter permease YejB;protein_id=WP_001656701.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 257158 258183 . + . ID=gene-CCO57_RS15430;Name=CCO57_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15430;old_locus_tag=CCO57_15415 NZ_NPMC01000008.1 Protein Homology CDS 257158 258183 . + 0 ID=cds-WP_001137748.1;Parent=gene-CCO57_RS15430;Dbxref=GenBank:WP_001137748.1;Name=WP_001137748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=CCO57_RS15430;product=ABC transporter permease;protein_id=WP_001137748.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 258185 259774 . + . ID=gene-CCO57_RS15435;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=CCO57_RS15435;old_locus_tag=CCO57_15420 NZ_NPMC01000008.1 Protein Homology CDS 258185 259774 . + 0 ID=cds-WP_094888463.1;Parent=gene-CCO57_RS15435;Dbxref=GenBank:WP_094888463.1;Name=WP_094888463.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=CCO57_RS15435;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_094888463.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 259778 260122 . - . ID=gene-CCO57_RS15440;Name=CCO57_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15440;old_locus_tag=CCO57_15425 NZ_NPMC01000008.1 Protein Homology CDS 259778 260122 . - 0 ID=cds-WP_001094639.1;Parent=gene-CCO57_RS15440;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=CCO57_RS15440;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 260513 261703 . - . ID=gene-CCO57_RS15450;Name=CCO57_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15450;old_locus_tag=CCO57_15435 NZ_NPMC01000008.1 Protein Homology CDS 260513 261703 . - 0 ID=cds-WP_000213344.1;Parent=gene-CCO57_RS15450;Dbxref=GenBank:WP_000213344.1;Name=WP_000213344.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=CCO57_RS15450;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213344.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 261731 262426 . - . ID=gene-CCO57_RS15455;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=CCO57_RS15455;old_locus_tag=CCO57_15440 NZ_NPMC01000008.1 Protein Homology CDS 261731 262426 . - 0 ID=cds-WP_001234836.1;Parent=gene-CCO57_RS15455;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=CCO57_RS15455;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 262578 264338 . + . ID=gene-CCO57_RS15460;Name=CCO57_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15460;old_locus_tag=CCO57_15445 NZ_NPMC01000008.1 Protein Homology CDS 262578 264338 . + 0 ID=cds-WP_000578124.1;Parent=gene-CCO57_RS15460;Dbxref=GenBank:WP_000578124.1;Name=WP_000578124.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=CCO57_RS15460;product=DEAD/DEAH box helicase;protein_id=WP_000578124.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 264463 264747 . + . ID=gene-CCO57_RS15465;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=CCO57_RS15465;old_locus_tag=CCO57_15450 NZ_NPMC01000008.1 Protein Homology CDS 264463 264747 . + 0 ID=cds-WP_000494192.1;Parent=gene-CCO57_RS15465;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=CCO57_RS15465;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 264868 265875 . - . ID=gene-CCO57_RS15470;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=CCO57_RS15470;old_locus_tag=CCO57_15455 NZ_NPMC01000008.1 Protein Homology CDS 264868 265875 . - 0 ID=cds-WP_000050812.1;Parent=gene-CCO57_RS15470;Dbxref=GenBank:WP_000050812.1;Name=WP_000050812.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=CCO57_RS15470;product=nucleoid-associated protein YejK;protein_id=WP_000050812.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 266055 266282 . + . ID=gene-CCO57_RS15475;Name=CCO57_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15475;old_locus_tag=CCO57_15460 NZ_NPMC01000008.1 Protein Homology CDS 266055 266282 . + 0 ID=cds-WP_001135904.1;Parent=gene-CCO57_RS15475;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=CCO57_RS15475;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 266314 268074 . + . ID=gene-CCO57_RS15480;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=CCO57_RS15480;old_locus_tag=CCO57_15465 NZ_NPMC01000008.1 Protein Homology CDS 266314 268074 . + 0 ID=cds-WP_000256159.1;Parent=gene-CCO57_RS15480;Dbxref=GenBank:WP_000256159.1;Name=WP_000256159.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=CCO57_RS15480;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256159.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 268148 268224 . + . ID=gene-CCO57_RS15485;Name=CCO57_RS15485;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS15485;old_locus_tag=CCO57_15470 NZ_NPMC01000008.1 tRNAscan-SE tRNA 268148 268224 . + . ID=rna-CCO57_RS15485;Parent=gene-CCO57_RS15485;anticodon=(pos:268182..268184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS15485;product=tRNA-Pro NZ_NPMC01000008.1 tRNAscan-SE exon 268148 268224 . + . ID=exon-CCO57_RS15485-1;Parent=rna-CCO57_RS15485;anticodon=(pos:268182..268184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS15485;product=tRNA-Pro NZ_NPMC01000008.1 RefSeq pseudogene 268180 268272 . + . ID=gene-CCO57_RS24640;Name=CCO57_RS24640;end_range=268272,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24640;old_locus_tag=CCO57_15475;partial=true;pseudo=true NZ_NPMC01000008.1 Protein Homology CDS 268180 268272 . + 0 ID=cds-CCO57_RS24640;Parent=gene-CCO57_RS24640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=268272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=CCO57_RS24640;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 268266 268469 . + . ID=gene-CCO57_RS15495;Name=CCO57_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15495;old_locus_tag=CCO57_15480 NZ_NPMC01000008.1 Protein Homology CDS 268266 268469 . + 0 ID=cds-WP_023213884.1;Parent=gene-CCO57_RS15495;Dbxref=GenBank:WP_023213884.1;Name=WP_023213884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=CCO57_RS15495;product=MsgA-like virulence protein;protein_id=WP_023213884.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 268662 269225 . - . ID=gene-CCO57_RS15500;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=CCO57_RS15500;old_locus_tag=CCO57_15485 NZ_NPMC01000008.1 Protein Homology CDS 268662 269225 . - 0 ID=cds-WP_000281871.1;Parent=gene-CCO57_RS15500;Dbxref=GenBank:WP_000281871.1;Name=WP_000281871.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=CCO57_RS15500;product=lipid A 3-O-deacylase PagL;protein_id=WP_000281871.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 270044 270691 . + . ID=gene-CCO57_RS15515;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=CCO57_RS15515;old_locus_tag=CCO57_15500 NZ_NPMC01000008.1 Protein Homology CDS 270044 270691 . + 0 ID=cds-WP_001115500.1;Parent=gene-CCO57_RS15515;Dbxref=GenBank:WP_001115500.1;Name=WP_001115500.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=CCO57_RS15515;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115500.1;transl_table=11 NZ_NPMC01000008.1 RefSeq gene 270735 271030 . - . ID=gene-CCO57_RS15520;Name=CCO57_RS15520;end_range=271030,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15520;old_locus_tag=CCO57_15505;partial=true NZ_NPMC01000008.1 Protein Homology CDS 270735 271030 . - 2 ID=cds-WP_094915022.1;Parent=gene-CCO57_RS15520;Dbxref=GenBank:WP_094915022.1;Name=WP_094915022.1;Ontology_term=GO:0005515;end_range=271030,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO57_RS15520;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_094915022.1;transl_table=11 ##sequence-region NZ_NPMC01000009.1 1 233427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1964831 NZ_NPMC01000009.1 RefSeq region 1 233427 . + . ID=NZ_NPMC01000009.1:1..233427;Dbxref=taxon:1964831;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Marseille;strain=CFSAN059887;sub-species=indica NZ_NPMC01000009.1 RefSeq pseudogene 363 564 . - . ID=gene-CCO57_RS24645;Name=CCO57_RS24645;end_range=564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24645;partial=true;pseudo=true;start_range=.,363 NZ_NPMC01000009.1 Protein Homology CDS 363 564 . - 0 ID=cds-CCO57_RS24645;Parent=gene-CCO57_RS24645;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=CCO57_RS24645;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,363;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 555 680 . + . ID=gene-CCO57_RS15530;Name=CCO57_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15530;old_locus_tag=CCO57_15515 NZ_NPMC01000009.1 Protein Homology CDS 555 680 . + 0 ID=cds-WP_000457876.1-2;Parent=gene-CCO57_RS15530;Dbxref=GenBank:WP_000457876.1;Name=WP_000457876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=CCO57_RS15530;product=hypothetical protein;protein_id=WP_000457876.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 1194 1340 . - . ID=gene-CCO57_RS24970;Name=CCO57_RS24970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24970 NZ_NPMC01000009.1 GeneMarkS-2+ CDS 1194 1340 . - 0 ID=cds-WP_001520350.1;Parent=gene-CCO57_RS24970;Dbxref=GenBank:WP_001520350.1;Name=WP_001520350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO57_RS24970;product=hypothetical protein;protein_id=WP_001520350.1;transl_table=11 NZ_NPMC01000009.1 RefSeq pseudogene 1355 1501 . + . ID=gene-CCO57_RS24975;Name=CCO57_RS24975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24975;partial=true;pseudo=true;start_range=.,1355 NZ_NPMC01000009.1 Protein Homology CDS 1355 1501 . + 0 ID=cds-CCO57_RS24975;Parent=gene-CCO57_RS24975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219268.1;locus_tag=CCO57_RS24975;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1355;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 1828 2442 . - . ID=gene-CCO57_RS15545;Name=CCO57_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15545;old_locus_tag=CCO57_15530 NZ_NPMC01000009.1 Protein Homology CDS 1828 2442 . - 0 ID=cds-WP_000848069.1;Parent=gene-CCO57_RS15545;Dbxref=GenBank:WP_000848069.1;Name=WP_000848069.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=CCO57_RS15545;product=disulfide bond formation protein B;protein_id=WP_000848069.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 2452 2610 . - . ID=gene-CCO57_RS15550;Name=CCO57_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15550;old_locus_tag=CCO57_15535 NZ_NPMC01000009.1 Protein Homology CDS 2452 2610 . - 0 ID=cds-WP_000480735.1;Parent=gene-CCO57_RS15550;Dbxref=GenBank:WP_000480735.1;Name=WP_000480735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=CCO57_RS15550;product=DUF5993 family protein;protein_id=WP_000480735.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 2742 3656 . - . ID=gene-CCO57_RS15555;Name=CCO57_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15555;old_locus_tag=CCO57_15540 NZ_NPMC01000009.1 Protein Homology CDS 2742 3656 . - 0 ID=cds-WP_001233445.1;Parent=gene-CCO57_RS15555;Dbxref=GenBank:WP_001233445.1;Name=WP_001233445.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=CCO57_RS15555;product=DMT family transporter;protein_id=WP_001233445.1;transl_table=11 NZ_NPMC01000009.1 RefSeq pseudogene 4447 5013 . - . ID=gene-CCO57_RS15560;Name=CCO57_RS15560;end_range=5013,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS15560;old_locus_tag=CCO57_15545;partial=true;pseudo=true NZ_NPMC01000009.1 Protein Homology CDS 4447 5013 . - 0 ID=cds-CCO57_RS15560;Parent=gene-CCO57_RS15560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;end_range=5013,.;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO57_RS15560;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 NZ_NPMC01000009.1 RefSeq pseudogene 5000 5165 . + . ID=gene-CCO57_RS15565;Name=CCO57_RS15565;end_range=5165,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS15565;old_locus_tag=CCO57_15550;partial=true;pseudo=true;start_range=.,5000 NZ_NPMC01000009.1 Protein Homology CDS 5000 5165 . + 0 ID=cds-CCO57_RS15565;Parent=gene-CCO57_RS15565;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=5165,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO57_RS15565;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,5000;transl_table=11 NZ_NPMC01000009.1 RefSeq pseudogene 5178 5717 . + . ID=gene-CCO57_RS15570;Name=CCO57_RS15570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS15570;old_locus_tag=CCO57_15555;partial=true;pseudo=true;start_range=.,5178 NZ_NPMC01000009.1 Protein Homology CDS 5178 5717 . + 0 ID=cds-CCO57_RS15570;Parent=gene-CCO57_RS15570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO57_RS15570;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,5178;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 5863 6003 . - . ID=gene-CCO57_RS15575;Name=CCO57_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15575;old_locus_tag=CCO57_15560 NZ_NPMC01000009.1 Protein Homology CDS 5863 6003 . - 0 ID=cds-WP_094915023.1;Parent=gene-CCO57_RS15575;Dbxref=GenBank:WP_094915023.1;Name=WP_094915023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=CCO57_RS15575;product=hypothetical protein;protein_id=WP_094915023.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 6169 6438 . - . ID=gene-CCO57_RS15580;Name=CCO57_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15580;old_locus_tag=CCO57_15565 NZ_NPMC01000009.1 Protein Homology CDS 6169 6438 . - 0 ID=cds-WP_077909932.1;Parent=gene-CCO57_RS15580;Dbxref=GenBank:WP_077909932.1;Name=WP_077909932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=CCO57_RS15580;product=hypothetical protein;protein_id=WP_077909932.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 6807 7226 . + . ID=gene-CCO57_RS15590;Name=CCO57_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15590;old_locus_tag=CCO57_15575 NZ_NPMC01000009.1 Protein Homology CDS 6807 7226 . + 0 ID=cds-WP_000354406.1;Parent=gene-CCO57_RS15590;Dbxref=GenBank:WP_000354406.1;Name=WP_000354406.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=CCO57_RS15590;product=GNAT family N-acetyltransferase;protein_id=WP_000354406.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 7614 8090 . - . ID=gene-CCO57_RS15595;Name=CCO57_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15595;old_locus_tag=CCO57_15580 NZ_NPMC01000009.1 Protein Homology CDS 7614 8090 . - 0 ID=cds-WP_094915024.1;Parent=gene-CCO57_RS15595;Dbxref=GenBank:WP_094915024.1;Name=WP_094915024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=CCO57_RS15595;product=hypothetical protein;protein_id=WP_094915024.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 8419 8814 . - . ID=gene-CCO57_RS15600;Name=CCO57_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15600;old_locus_tag=CCO57_15585 NZ_NPMC01000009.1 Protein Homology CDS 8419 8814 . - 0 ID=cds-WP_000422881.1;Parent=gene-CCO57_RS15600;Dbxref=GenBank:WP_000422881.1;Name=WP_000422881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=CCO57_RS15600;product=DUF1398 domain-containing protein;protein_id=WP_000422881.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 9498 10220 . + . ID=gene-CCO57_RS15610;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=CCO57_RS15610;old_locus_tag=CCO57_15595 NZ_NPMC01000009.1 Protein Homology CDS 9498 10220 . + 0 ID=cds-WP_000182074.1;Parent=gene-CCO57_RS15610;Dbxref=GenBank:WP_000182074.1;Name=WP_000182074.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=CCO57_RS15610;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_000182074.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 10505 10669 . + . ID=gene-CCO57_RS15615;Name=CCO57_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15615;old_locus_tag=CCO57_15600 NZ_NPMC01000009.1 Protein Homology CDS 10505 10669 . + 0 ID=cds-WP_001134857.1;Parent=gene-CCO57_RS15615;Dbxref=GenBank:WP_001134857.1;Name=WP_001134857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=CCO57_RS15615;product=hypothetical protein;protein_id=WP_001134857.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 10894 11544 . + . ID=gene-CCO57_RS15620;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=CCO57_RS15620;old_locus_tag=CCO57_15605 NZ_NPMC01000009.1 Protein Homology CDS 10894 11544 . + 0 ID=cds-WP_000986166.1;Parent=gene-CCO57_RS15620;Dbxref=GenBank:WP_000986166.1;Name=WP_000986166.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=CCO57_RS15620;product=protein-serine/threonine phosphatase;protein_id=WP_000986166.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 11563 11754 . - . ID=gene-CCO57_RS15625;Name=CCO57_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15625;old_locus_tag=CCO57_15610 NZ_NPMC01000009.1 Protein Homology CDS 11563 11754 . - 0 ID=cds-WP_000457838.1;Parent=gene-CCO57_RS15625;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=CCO57_RS15625;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 11865 12101 . - . ID=gene-CCO57_RS15630;Name=CCO57_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15630;old_locus_tag=CCO57_15615 NZ_NPMC01000009.1 Protein Homology CDS 11865 12101 . - 0 ID=cds-WP_024131167.1;Parent=gene-CCO57_RS15630;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=CCO57_RS15630;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 12218 13657 . - . ID=gene-CCO57_RS15635;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=CCO57_RS15635;old_locus_tag=CCO57_15620 NZ_NPMC01000009.1 Protein Homology CDS 12218 13657 . - 0 ID=cds-WP_094915045.1;Parent=gene-CCO57_RS15635;Dbxref=GenBank:WP_094915045.1;Name=WP_094915045.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=CCO57_RS15635;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_094915045.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 13735 16368 . - . ID=gene-CCO57_RS15640;Name=CCO57_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15640;old_locus_tag=CCO57_15625 NZ_NPMC01000009.1 Protein Homology CDS 13735 16368 . - 0 ID=cds-WP_156016912.1;Parent=gene-CCO57_RS15640;Dbxref=GenBank:WP_156016912.1;Name=WP_156016912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=CCO57_RS15640;product=PqiB family protein;protein_id=WP_156016912.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 16337 17620 . - . ID=gene-CCO57_RS15645;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=CCO57_RS15645;old_locus_tag=CCO57_15630 NZ_NPMC01000009.1 Protein Homology CDS 16337 17620 . - 0 ID=cds-WP_001207293.1;Parent=gene-CCO57_RS15645;Dbxref=GenBank:WP_001207293.1;Name=WP_001207293.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=CCO57_RS15645;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207293.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 17749 18246 . + . ID=gene-CCO57_RS15650;Name=CCO57_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15650;old_locus_tag=CCO57_15635 NZ_NPMC01000009.1 Protein Homology CDS 17749 18246 . + 0 ID=cds-WP_001518229.1;Parent=gene-CCO57_RS15650;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=CCO57_RS15650;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 18344 19030 . + . ID=gene-CCO57_RS15655;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=CCO57_RS15655;old_locus_tag=CCO57_15640 NZ_NPMC01000009.1 Protein Homology CDS 18344 19030 . + 0 ID=cds-WP_000431401.1;Parent=gene-CCO57_RS15655;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=CCO57_RS15655;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 19050 21098 . + . ID=gene-CCO57_RS15660;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=CCO57_RS15660;old_locus_tag=CCO57_15645 NZ_NPMC01000009.1 Protein Homology CDS 19050 21098 . + 0 ID=cds-WP_001091241.1;Parent=gene-CCO57_RS15660;Dbxref=GenBank:WP_001091241.1;Name=WP_001091241.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=CCO57_RS15660;product=carboxy terminal-processing peptidase;protein_id=WP_001091241.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 21291 22172 . + . ID=gene-CCO57_RS15665;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=CCO57_RS15665;old_locus_tag=CCO57_15650 NZ_NPMC01000009.1 Protein Homology CDS 21291 22172 . + 0 ID=cds-WP_000984498.1;Parent=gene-CCO57_RS15665;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=CCO57_RS15665;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 22220 23593 . - . ID=gene-CCO57_RS15670;Name=CCO57_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15670;old_locus_tag=CCO57_15655 NZ_NPMC01000009.1 Protein Homology CDS 22220 23593 . - 0 ID=cds-WP_000416142.1;Parent=gene-CCO57_RS15670;Dbxref=GenBank:WP_000416142.1;Name=WP_000416142.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=CCO57_RS15670;product=MFS transporter;protein_id=WP_000416142.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 23769 24560 . + . ID=gene-CCO57_RS15675;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=CCO57_RS15675;old_locus_tag=CCO57_15660 NZ_NPMC01000009.1 Protein Homology CDS 23769 24560 . + 0 ID=cds-WP_001262195.1;Parent=gene-CCO57_RS15675;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=CCO57_RS15675;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 24772 25011 . - . ID=gene-CCO57_RS15680;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=CCO57_RS15680;old_locus_tag=CCO57_15665 NZ_NPMC01000009.1 Protein Homology CDS 24772 25011 . - 0 ID=cds-WP_001236778.1;Parent=gene-CCO57_RS15680;Dbxref=GenBank:WP_001236778.1;Name=WP_001236778.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=CCO57_RS15680;product=invasion protein YobH;protein_id=WP_001236778.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 25169 25312 . + . ID=gene-CCO57_RS15685;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=CCO57_RS15685;old_locus_tag=CCO57_15670 NZ_NPMC01000009.1 Protein Homology CDS 25169 25312 . + 0 ID=cds-WP_000714547.1;Parent=gene-CCO57_RS15685;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=CCO57_RS15685;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 25383 25670 . + . ID=gene-CCO57_RS15690;Name=CCO57_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15690;old_locus_tag=CCO57_15675 NZ_NPMC01000009.1 Protein Homology CDS 25383 25670 . + 0 ID=cds-WP_001000660.1;Parent=gene-CCO57_RS15690;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=CCO57_RS15690;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 26319 26462 . + . ID=gene-CCO57_RS15695;Name=CCO57_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15695;old_locus_tag=CCO57_15680 NZ_NPMC01000009.1 Protein Homology CDS 26319 26462 . + 0 ID=cds-WP_001537930.1;Parent=gene-CCO57_RS15695;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=CCO57_RS15695;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 26475 26684 . + . ID=gene-CCO57_RS15700;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO57_RS15700;old_locus_tag=CCO57_15685 NZ_NPMC01000009.1 Protein Homology CDS 26475 26684 . + 0 ID=cds-WP_001062678.1;Parent=gene-CCO57_RS15700;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=CCO57_RS15700;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 26904 28649 . + . ID=gene-CCO57_RS15705;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO57_RS15705;old_locus_tag=CCO57_15690 NZ_NPMC01000009.1 Protein Homology CDS 26904 28649 . + 0 ID=cds-WP_000730322.1;Parent=gene-CCO57_RS15705;Dbxref=GenBank:WP_000730322.1;Name=WP_000730322.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=CCO57_RS15705;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730322.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 28715 29524 . + . ID=gene-CCO57_RS15710;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=CCO57_RS15710;old_locus_tag=CCO57_15695 NZ_NPMC01000009.1 Protein Homology CDS 28715 29524 . + 0 ID=cds-WP_000010916.1;Parent=gene-CCO57_RS15710;Dbxref=GenBank:WP_000010916.1;Name=WP_000010916.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=CCO57_RS15710;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010916.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 29521 30087 . - . ID=gene-CCO57_RS15715;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=CCO57_RS15715;old_locus_tag=CCO57_15700 NZ_NPMC01000009.1 Protein Homology CDS 29521 30087 . - 0 ID=cds-WP_001518359.1;Parent=gene-CCO57_RS15715;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=CCO57_RS15715;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_NPMC01000009.1 cmsearch riboswitch 30199 30300 . - . ID=id-NZ_NPMC01000009.1:30199..30300;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMC01000009.1 RefSeq gene 30497 30955 . - . ID=gene-CCO57_RS15725;Name=CCO57_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15725;old_locus_tag=CCO57_15710 NZ_NPMC01000009.1 Protein Homology CDS 30497 30955 . - 0 ID=cds-WP_000156280.1;Parent=gene-CCO57_RS15725;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=CCO57_RS15725;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 31014 31865 . - . ID=gene-CCO57_RS15730;Name=CCO57_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15730;old_locus_tag=CCO57_15715 NZ_NPMC01000009.1 Protein Homology CDS 31014 31865 . - 0 ID=cds-WP_001518647.1;Parent=gene-CCO57_RS15730;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=CCO57_RS15730;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 31878 32678 . - . ID=gene-CCO57_RS15735;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=CCO57_RS15735;old_locus_tag=CCO57_15720 NZ_NPMC01000009.1 Protein Homology CDS 31878 32678 . - 0 ID=cds-WP_000406918.1;Parent=gene-CCO57_RS15735;Dbxref=GenBank:WP_000406918.1;Name=WP_000406918.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=CCO57_RS15735;product=PTS mannose transporter subunit IIC;protein_id=WP_000406918.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 32731 33699 . - . ID=gene-CCO57_RS15740;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=CCO57_RS15740;old_locus_tag=CCO57_15725 NZ_NPMC01000009.1 Protein Homology CDS 32731 33699 . - 0 ID=cds-WP_000150523.1;Parent=gene-CCO57_RS15740;Dbxref=GenBank:WP_000150523.1;Name=WP_000150523.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=CCO57_RS15740;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150523.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 34017 34184 . + . ID=gene-CCO57_RS24980;Name=CCO57_RS24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24980 NZ_NPMC01000009.1 Protein Homology CDS 34017 34184 . + 0 ID=cds-WP_370739650.1;Parent=gene-CCO57_RS24980;Dbxref=GenBank:WP_370739650.1;Name=WP_370739650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=CCO57_RS24980;product=protein YoaL;protein_id=WP_370739650.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 34172 35731 . + . ID=gene-CCO57_RS15750;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=CCO57_RS15750;old_locus_tag=CCO57_15735 NZ_NPMC01000009.1 Protein Homology CDS 34172 35731 . + 0 ID=cds-WP_000421815.1;Parent=gene-CCO57_RS15750;Dbxref=GenBank:WP_000421815.1;Name=WP_000421815.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=CCO57_RS15750;product=CNNM family cation transport protein YoaE;protein_id=WP_000421815.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 35753 37354 . - . ID=gene-CCO57_RS15755;Name=CCO57_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15755;old_locus_tag=CCO57_15740 NZ_NPMC01000009.1 Protein Homology CDS 35753 37354 . - 0 ID=cds-WP_053258830.1;Parent=gene-CCO57_RS15755;Dbxref=GenBank:WP_053258830.1;Name=WP_053258830.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=CCO57_RS15755;product=EAL domain-containing protein;protein_id=WP_053258830.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 37492 38856 . - . ID=gene-CCO57_RS15760;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=CCO57_RS15760;old_locus_tag=CCO57_15745 NZ_NPMC01000009.1 Protein Homology CDS 37492 38856 . - 0 ID=cds-WP_001530748.1;Parent=gene-CCO57_RS15760;Dbxref=GenBank:WP_001530748.1;Name=WP_001530748.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=CCO57_RS15760;product=L-serine ammonia-lyase;protein_id=WP_001530748.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 39120 39698 . - . ID=gene-CCO57_RS15765;Name=CCO57_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15765;old_locus_tag=CCO57_15750 NZ_NPMC01000009.1 Protein Homology CDS 39120 39698 . - 0 ID=cds-WP_000381544.1;Parent=gene-CCO57_RS15765;Dbxref=GenBank:WP_000381544.1;Name=WP_000381544.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=CCO57_RS15765;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 39702 41066 . - . ID=gene-CCO57_RS15770;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=CCO57_RS15770;old_locus_tag=CCO57_15755 NZ_NPMC01000009.1 Protein Homology CDS 39702 41066 . - 0 ID=cds-WP_000978466.1;Parent=gene-CCO57_RS15770;Dbxref=GenBank:WP_000978466.1;Name=WP_000978466.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=CCO57_RS15770;product=aminodeoxychorismate synthase component 1;protein_id=WP_000978466.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 41147 41326 . + . ID=gene-CCO57_RS15775;Name=CCO57_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15775;old_locus_tag=CCO57_15760 NZ_NPMC01000009.1 Protein Homology CDS 41147 41326 . + 0 ID=cds-WP_000457328.1;Parent=gene-CCO57_RS15775;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=CCO57_RS15775;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 41332 41676 . - . ID=gene-CCO57_RS15780;Name=CCO57_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15780;old_locus_tag=CCO57_15765 NZ_NPMC01000009.1 Protein Homology CDS 41332 41676 . - 0 ID=cds-WP_000029550.1;Parent=gene-CCO57_RS15780;Dbxref=GenBank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=CCO57_RS15780;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 41808 43718 . + . ID=gene-CCO57_RS15785;Name=CCO57_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15785;old_locus_tag=CCO57_15770 NZ_NPMC01000009.1 Protein Homology CDS 41808 43718 . + 0 ID=cds-WP_000128807.1;Parent=gene-CCO57_RS15785;Dbxref=GenBank:WP_000128807.1;Name=WP_000128807.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=CCO57_RS15785;product=ATP-dependent DNA helicase;protein_id=WP_000128807.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 43776 44471 . + . ID=gene-CCO57_RS15790;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CCO57_RS15790;old_locus_tag=CCO57_15775 NZ_NPMC01000009.1 Protein Homology CDS 43776 44471 . + 0 ID=cds-WP_001221017.1;Parent=gene-CCO57_RS15790;Dbxref=GenBank:WP_001221017.1;Name=WP_001221017.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=CCO57_RS15790;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221017.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 44543 45124 . + . ID=gene-CCO57_RS15795;Name=CCO57_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15795;old_locus_tag=CCO57_15780 NZ_NPMC01000009.1 Protein Homology CDS 44543 45124 . + 0 ID=cds-WP_053258851.1;Parent=gene-CCO57_RS15795;Dbxref=GenBank:WP_053258851.1;Name=WP_053258851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=CCO57_RS15795;product=Slp family lipoprotein;protein_id=WP_053258851.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 45329 47014 . + . ID=gene-CCO57_RS15805;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CCO57_RS15805;old_locus_tag=CCO57_15790 NZ_NPMC01000009.1 Protein Homology CDS 45329 47014 . + 0 ID=cds-WP_000758418.1;Parent=gene-CCO57_RS15805;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=CCO57_RS15805;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 47087 48214 . + . ID=gene-CCO57_RS15810;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=CCO57_RS15810;old_locus_tag=CCO57_15795 NZ_NPMC01000009.1 Protein Homology CDS 47087 48214 . + 0 ID=cds-WP_001109124.1;Parent=gene-CCO57_RS15810;Dbxref=GenBank:WP_001109124.1;Name=WP_001109124.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=CCO57_RS15810;product=ribonuclease D;protein_id=WP_001109124.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 48336 48602 . - . ID=gene-CCO57_RS15815;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=CCO57_RS15815;old_locus_tag=CCO57_15800 NZ_NPMC01000009.1 Protein Homology CDS 48336 48602 . - 0 ID=cds-WP_001185666.1;Parent=gene-CCO57_RS15815;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=CCO57_RS15815;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 48606 49418 . - . ID=gene-CCO57_RS15820;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=CCO57_RS15820;old_locus_tag=CCO57_15805 NZ_NPMC01000009.1 Protein Homology CDS 48606 49418 . - 0 ID=cds-WP_000101047.1;Parent=gene-CCO57_RS15820;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=CCO57_RS15820;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 49442 50149 . - . ID=gene-CCO57_RS15825;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=CCO57_RS15825;old_locus_tag=CCO57_15810 NZ_NPMC01000009.1 Protein Homology CDS 49442 50149 . - 0 ID=cds-WP_000072527.1;Parent=gene-CCO57_RS15825;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=CCO57_RS15825;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 50275 50568 . + . ID=gene-CCO57_RS15830;Name=CCO57_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15830;old_locus_tag=CCO57_15815 NZ_NPMC01000009.1 Protein Homology CDS 50275 50568 . + 0 ID=cds-WP_001537109.1;Parent=gene-CCO57_RS15830;Dbxref=GenBank:WP_001537109.1;Name=WP_001537109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=CCO57_RS15830;product=YcgL domain-containing protein;protein_id=WP_001537109.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 50618 51277 . + . ID=gene-CCO57_RS15835;Name=CCO57_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15835;old_locus_tag=CCO57_15820 NZ_NPMC01000009.1 Protein Homology CDS 50618 51277 . + 0 ID=cds-WP_001519895.1;Parent=gene-CCO57_RS15835;Dbxref=GenBank:WP_001519895.1;Name=WP_001519895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=CCO57_RS15835;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001519895.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 51370 51816 . + . ID=gene-CCO57_RS15840;Name=CCO57_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15840;old_locus_tag=CCO57_15825 NZ_NPMC01000009.1 Protein Homology CDS 51370 51816 . + 0 ID=cds-WP_001285703.1;Parent=gene-CCO57_RS15840;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=CCO57_RS15840;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 52168 52305 . + . ID=gene-CCO57_RS15845;Name=CCO57_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15845;old_locus_tag=CCO57_15830 NZ_NPMC01000009.1 Protein Homology CDS 52168 52305 . + 0 ID=cds-WP_001519337.1;Parent=gene-CCO57_RS15845;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=CCO57_RS15845;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 52498 52671 . + . ID=gene-CCO57_RS15850;Name=CCO57_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15850;old_locus_tag=CCO57_15835 NZ_NPMC01000009.1 Protein Homology CDS 52498 52671 . + 0 ID=cds-WP_001083582.1;Parent=gene-CCO57_RS15850;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=CCO57_RS15850;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 52743 53084 . - . ID=gene-CCO57_RS15855;Name=CCO57_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15855;old_locus_tag=CCO57_15840 NZ_NPMC01000009.1 Protein Homology CDS 52743 53084 . - 0 ID=cds-WP_000018967.1;Parent=gene-CCO57_RS15855;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=CCO57_RS15855;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 53193 53723 . - . ID=gene-CCO57_RS15860;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=CCO57_RS15860;old_locus_tag=CCO57_15845 NZ_NPMC01000009.1 Protein Homology CDS 53193 53723 . - 0 ID=cds-WP_031568269.1;Parent=gene-CCO57_RS15860;Dbxref=GenBank:WP_031568269.1;Name=WP_031568269.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=CCO57_RS15860;product=disulfide bond formation protein DsbB;protein_id=WP_031568269.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 53865 55409 . - . ID=gene-CCO57_RS15865;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=CCO57_RS15865;old_locus_tag=CCO57_15850 NZ_NPMC01000009.1 Protein Homology CDS 53865 55409 . - 0 ID=cds-WP_031568270.1;Parent=gene-CCO57_RS15865;Dbxref=GenBank:WP_031568270.1;Name=WP_031568270.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=CCO57_RS15865;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_031568270.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 55629 56348 . + . ID=gene-CCO57_RS15870;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=CCO57_RS15870;old_locus_tag=CCO57_15855 NZ_NPMC01000009.1 Protein Homology CDS 55629 56348 . + 0 ID=cds-WP_000234826.1;Parent=gene-CCO57_RS15870;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=CCO57_RS15870;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 56395 57927 . - . ID=gene-CCO57_RS15875;Name=CCO57_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15875;old_locus_tag=CCO57_15860 NZ_NPMC01000009.1 Protein Homology CDS 56395 57927 . - 0 ID=cds-WP_000190831.1;Parent=gene-CCO57_RS15875;Dbxref=GenBank:WP_000190831.1;Name=WP_000190831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=CCO57_RS15875;product=SpoVR family protein;protein_id=WP_000190831.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 58250 59548 . + . ID=gene-CCO57_RS15880;Name=CCO57_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15880;old_locus_tag=CCO57_15865 NZ_NPMC01000009.1 Protein Homology CDS 58250 59548 . + 0 ID=cds-WP_001266935.1;Parent=gene-CCO57_RS15880;Dbxref=GenBank:WP_001266935.1;Name=WP_001266935.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=CCO57_RS15880;product=D-amino acid dehydrogenase;protein_id=WP_001266935.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 59562 60632 . + . ID=gene-CCO57_RS15885;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=CCO57_RS15885;old_locus_tag=CCO57_15870 NZ_NPMC01000009.1 Protein Homology CDS 59562 60632 . + 0 ID=cds-WP_000197894.1;Parent=gene-CCO57_RS15885;Dbxref=GenBank:WP_000197894.1;Name=WP_000197894.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=CCO57_RS15885;product=catabolic alanine racemase DadX;protein_id=WP_000197894.1;transl_table=11 NZ_NPMC01000009.1 RefSeq pseudogene 60665 60757 . + . ID=gene-CCO57_RS24985;Name=CCO57_RS24985;end_range=60757,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS24985;partial=true;pseudo=true NZ_NPMC01000009.1 Protein Homology CDS 60665 60757 . + 0 ID=cds-CCO57_RS24985;Parent=gene-CCO57_RS24985;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=60757,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=CCO57_RS24985;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000009.1 RefSeq pseudogene 60713 62428 . - . ID=gene-CCO57_RS15890;Name=CCO57_RS15890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS15890;old_locus_tag=CCO57_15875;partial=true;pseudo=true;start_range=.,60713 NZ_NPMC01000009.1 Protein Homology CDS 60713 62428 . - 0 ID=cds-CCO57_RS15890;Parent=gene-CCO57_RS15890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=CCO57_RS15890;partial=true;product=potassium/proton antiporter;pseudo=true;start_range=.,60713;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 62525 63439 . - . ID=gene-CCO57_RS15895;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=CCO57_RS15895;old_locus_tag=CCO57_15880 NZ_NPMC01000009.1 Protein Homology CDS 62525 63439 . - 0 ID=cds-WP_000051616.1;Parent=gene-CCO57_RS15895;Dbxref=GenBank:WP_000051616.1;Name=WP_000051616.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=CCO57_RS15895;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051616.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 63610 64221 . + . ID=gene-CCO57_RS15900;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=CCO57_RS15900;old_locus_tag=CCO57_15885 NZ_NPMC01000009.1 Protein Homology CDS 63610 64221 . + 0 ID=cds-WP_000776974.1;Parent=gene-CCO57_RS15900;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=CCO57_RS15900;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 64235 64969 . - . ID=gene-CCO57_RS15905;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=CCO57_RS15905;old_locus_tag=CCO57_15890 NZ_NPMC01000009.1 Protein Homology CDS 64235 64969 . - 0 ID=cds-WP_000017411.1;Parent=gene-CCO57_RS15905;Dbxref=GenBank:WP_000017411.1;Name=WP_000017411.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=CCO57_RS15905;product=flagellar brake protein YcgR;protein_id=WP_000017411.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 65138 65392 . + . ID=gene-CCO57_RS15910;Name=CCO57_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15910;old_locus_tag=CCO57_15895 NZ_NPMC01000009.1 Protein Homology CDS 65138 65392 . + 0 ID=cds-WP_000511320.1;Parent=gene-CCO57_RS15910;Dbxref=GenBank:WP_000511320.1;Name=WP_000511320.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=CCO57_RS15910;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511320.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 65455 67167 . - . ID=gene-CCO57_RS15915;Name=CCO57_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15915;old_locus_tag=CCO57_15900 NZ_NPMC01000009.1 Protein Homology CDS 65455 67167 . - 0 ID=cds-WP_094915026.1;Parent=gene-CCO57_RS15915;Dbxref=GenBank:WP_094915026.1;Name=WP_094915026.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=CCO57_RS15915;product=alpha%2Calpha-trehalase;protein_id=WP_094915026.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 67381 68655 . - . ID=gene-CCO57_RS15920;Name=CCO57_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15920;old_locus_tag=CCO57_15905 NZ_NPMC01000009.1 Protein Homology CDS 67381 68655 . - 0 ID=cds-WP_001519734.1;Parent=gene-CCO57_RS15920;Dbxref=GenBank:WP_001519734.1;Name=WP_001519734.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=CCO57_RS15920;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001519734.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 69050 69139 . - . ID=gene-CCO57_RS15925;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=CCO57_RS15925;old_locus_tag=CCO57_15910 NZ_NPMC01000009.1 Protein Homology CDS 69050 69139 . - 0 ID=cds-WP_000270306.1;Parent=gene-CCO57_RS15925;Dbxref=GenBank:WP_000270306.1;Name=WP_000270306.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=CCO57_RS15925;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270306.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 69152 70288 . - . ID=gene-CCO57_RS15930;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=CCO57_RS15930;old_locus_tag=CCO57_15915 NZ_NPMC01000009.1 Protein Homology CDS 69152 70288 . - 0 ID=cds-WP_000888110.1;Parent=gene-CCO57_RS15930;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=CCO57_RS15930;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 70300 71844 . - . ID=gene-CCO57_RS15935;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=CCO57_RS15935;old_locus_tag=CCO57_15920 NZ_NPMC01000009.1 Protein Homology CDS 70300 71844 . - 0 ID=cds-WP_000263601.1;Parent=gene-CCO57_RS15935;Dbxref=GenBank:WP_000263601.1;Name=WP_000263601.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=CCO57_RS15935;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263601.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 71919 72767 . - . ID=gene-CCO57_RS15940;Name=CCO57_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15940;old_locus_tag=CCO57_15925 NZ_NPMC01000009.1 Protein Homology CDS 71919 72767 . - 0 ID=cds-WP_000063367.1;Parent=gene-CCO57_RS15940;Dbxref=GenBank:WP_000063367.1;Name=WP_000063367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=CCO57_RS15940;product=hydrogenase expression/formation protein;protein_id=WP_000063367.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 72764 73168 . - . ID=gene-CCO57_RS15945;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=CCO57_RS15945;old_locus_tag=CCO57_15930 NZ_NPMC01000009.1 Protein Homology CDS 72764 73168 . - 0 ID=cds-WP_001262570.1;Parent=gene-CCO57_RS15945;Dbxref=GenBank:WP_001262570.1;Name=WP_001262570.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=CCO57_RS15945;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262570.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 73158 73754 . - . ID=gene-CCO57_RS15950;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=CCO57_RS15950;old_locus_tag=CCO57_15935 NZ_NPMC01000009.1 Protein Homology CDS 73158 73754 . - 0 ID=cds-WP_000993804.1;Parent=gene-CCO57_RS15950;Dbxref=GenBank:WP_000993804.1;Name=WP_000993804.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=CCO57_RS15950;product=hydrogenase 1 maturation protease;protein_id=WP_000993804.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 73751 74482 . - . ID=gene-CCO57_RS15955;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=CCO57_RS15955;old_locus_tag=CCO57_15940 NZ_NPMC01000009.1 Protein Homology CDS 73751 74482 . - 0 ID=cds-WP_000147031.1;Parent=gene-CCO57_RS15955;Dbxref=GenBank:WP_000147031.1;Name=WP_000147031.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=CCO57_RS15955;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147031.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 74501 76294 . - . ID=gene-CCO57_RS15960;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=CCO57_RS15960;old_locus_tag=CCO57_15945 NZ_NPMC01000009.1 Protein Homology CDS 74501 76294 . - 0 ID=cds-WP_000070982.1;Parent=gene-CCO57_RS15960;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=CCO57_RS15960;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 76291 77409 . - . ID=gene-CCO57_RS15965;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=CCO57_RS15965;old_locus_tag=CCO57_15950 NZ_NPMC01000009.1 Protein Homology CDS 76291 77409 . - 0 ID=cds-WP_001058312.1;Parent=gene-CCO57_RS15965;Dbxref=GenBank:WP_001058312.1;Name=WP_001058312.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=CCO57_RS15965;product=hydrogenase 1 small subunit;protein_id=WP_001058312.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 77903 79168 . + . ID=gene-CCO57_RS15970;Name=CCO57_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS15970;old_locus_tag=CCO57_15955 NZ_NPMC01000009.1 Protein Homology CDS 77903 79168 . + 0 ID=cds-WP_052907401.1;Parent=gene-CCO57_RS15970;Dbxref=GenBank:WP_052907401.1;Name=WP_052907401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=CCO57_RS15970;product=DUF4427 domain-containing protein;protein_id=WP_052907401.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 79327 80418 . - . ID=gene-CCO57_RS15975;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CCO57_RS15975;old_locus_tag=CCO57_15960 NZ_NPMC01000009.1 Protein Homology CDS 79327 80418 . - 0 ID=cds-WP_000505850.1;Parent=gene-CCO57_RS15975;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=CCO57_RS15975;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 80535 81119 . - . ID=gene-CCO57_RS15980;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CCO57_RS15980;old_locus_tag=CCO57_15965 NZ_NPMC01000009.1 Protein Homology CDS 80535 81119 . - 0 ID=cds-WP_001538256.1;Parent=gene-CCO57_RS15980;Dbxref=GenBank:WP_001538256.1;Name=WP_001538256.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=CCO57_RS15980;product=aminoacyl-tRNA hydrolase;protein_id=WP_001538256.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 81395 81673 . + . ID=gene-CCO57_RS15985;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=CCO57_RS15985;old_locus_tag=CCO57_15970 NZ_NPMC01000009.1 Protein Homology CDS 81395 81673 . + 0 ID=cds-WP_000823878.1;Parent=gene-CCO57_RS15985;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=CCO57_RS15985;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 81718 83403 . - . ID=gene-CCO57_RS15990;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=CCO57_RS15990;old_locus_tag=CCO57_15975 NZ_NPMC01000009.1 Protein Homology CDS 81718 83403 . - 0 ID=cds-WP_001037181.1;Parent=gene-CCO57_RS15990;Dbxref=GenBank:WP_001037181.1;Name=WP_001037181.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=CCO57_RS15990;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037181.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 83528 84475 . - . ID=gene-CCO57_RS15995;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=CCO57_RS15995;old_locus_tag=CCO57_15980 NZ_NPMC01000009.1 Protein Homology CDS 83528 84475 . - 0 ID=cds-WP_001518537.1;Parent=gene-CCO57_RS15995;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=CCO57_RS15995;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 84741 85592 . - . ID=gene-CCO57_RS16000;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CCO57_RS16000;old_locus_tag=CCO57_15985 NZ_NPMC01000009.1 Protein Homology CDS 84741 85592 . - 0 ID=cds-WP_000988251.1;Parent=gene-CCO57_RS16000;Dbxref=GenBank:WP_000988251.1;Name=WP_000988251.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=CCO57_RS16000;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988251.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 85589 86212 . - . ID=gene-CCO57_RS16005;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=CCO57_RS16005;old_locus_tag=CCO57_15990 NZ_NPMC01000009.1 Protein Homology CDS 85589 86212 . - 0 ID=cds-WP_000174484.1;Parent=gene-CCO57_RS16005;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=CCO57_RS16005;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 86526 87782 . + . ID=gene-CCO57_RS16010;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CCO57_RS16010;old_locus_tag=CCO57_15995 NZ_NPMC01000009.1 Protein Homology CDS 86526 87782 . + 0 ID=cds-WP_000173208.1;Parent=gene-CCO57_RS16010;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=CCO57_RS16010;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 87823 88905 . + . ID=gene-CCO57_RS16015;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CCO57_RS16015;old_locus_tag=CCO57_16000 NZ_NPMC01000009.1 Protein Homology CDS 87823 88905 . + 0 ID=cds-WP_000804708.1;Parent=gene-CCO57_RS16015;Dbxref=GenBank:WP_000804708.1;Name=WP_000804708.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=CCO57_RS16015;product=peptide chain release factor 1;protein_id=WP_000804708.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 88905 89738 . + . ID=gene-CCO57_RS16020;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CCO57_RS16020;old_locus_tag=CCO57_16005 NZ_NPMC01000009.1 Protein Homology CDS 88905 89738 . + 0 ID=cds-WP_000347310.1;Parent=gene-CCO57_RS16020;Dbxref=GenBank:WP_000347310.1;Name=WP_000347310.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=CCO57_RS16020;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000347310.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 89735 90124 . + . ID=gene-CCO57_RS16025;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=CCO57_RS16025;old_locus_tag=CCO57_16010 NZ_NPMC01000009.1 Protein Homology CDS 89735 90124 . + 0 ID=cds-WP_000150666.1;Parent=gene-CCO57_RS16025;Dbxref=GenBank:WP_000150666.1;Name=WP_000150666.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=CCO57_RS16025;product=invasion regulator SirB2;protein_id=WP_000150666.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 90128 90937 . + . ID=gene-CCO57_RS16030;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=CCO57_RS16030;old_locus_tag=CCO57_16015 NZ_NPMC01000009.1 Protein Homology CDS 90128 90937 . + 0 ID=cds-WP_001257065.1;Parent=gene-CCO57_RS16030;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=CCO57_RS16030;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 90975 91829 . + . ID=gene-CCO57_RS16035;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CCO57_RS16035;old_locus_tag=CCO57_16020 NZ_NPMC01000009.1 Protein Homology CDS 90975 91829 . + 0 ID=cds-WP_000811046.1;Parent=gene-CCO57_RS16035;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=CCO57_RS16035;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 91883 92983 . - . ID=gene-CCO57_RS16040;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=CCO57_RS16040;old_locus_tag=CCO57_16025 NZ_NPMC01000009.1 Protein Homology CDS 91883 92983 . - 0 ID=cds-WP_000148418.1;Parent=gene-CCO57_RS16040;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=CCO57_RS16040;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 93250 93480 . + . ID=gene-CCO57_RS16045;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=CCO57_RS16045;old_locus_tag=CCO57_16030 NZ_NPMC01000009.1 Protein Homology CDS 93250 93480 . + 0 ID=cds-WP_094915027.1;Parent=gene-CCO57_RS16045;Dbxref=GenBank:WP_094915027.1;Name=WP_094915027.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=CCO57_RS16045;product=putative cation transport regulator ChaB;protein_id=WP_094915027.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 93560 93913 . - . ID=gene-CCO57_RS16050;Name=CCO57_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16050;old_locus_tag=CCO57_16035 NZ_NPMC01000009.1 Protein Homology CDS 93560 93913 . - 0 ID=cds-WP_001179794.1;Parent=gene-CCO57_RS16050;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=CCO57_RS16050;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 94090 95514 . + . ID=gene-CCO57_RS16055;Name=CCO57_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16055;old_locus_tag=CCO57_16040 NZ_NPMC01000009.1 Protein Homology CDS 94090 95514 . + 0 ID=cds-WP_094915028.1;Parent=gene-CCO57_RS16055;Dbxref=GenBank:WP_094915028.1;Name=WP_094915028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=CCO57_RS16055;product=YchO/YchP family invasin;protein_id=WP_094915028.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 95515 96165 . - . ID=gene-CCO57_RS16060;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=CCO57_RS16060;old_locus_tag=CCO57_16045 NZ_NPMC01000009.1 Protein Homology CDS 95515 96165 . - 0 ID=cds-WP_001064598.1;Parent=gene-CCO57_RS16060;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=CCO57_RS16060;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 96158 97954 . - . ID=gene-CCO57_RS16065;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=CCO57_RS16065;old_locus_tag=CCO57_16050 NZ_NPMC01000009.1 Protein Homology CDS 96158 97954 . - 0 ID=cds-WP_000476241.1;Parent=gene-CCO57_RS16065;Dbxref=GenBank:WP_000476241.1;Name=WP_000476241.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=CCO57_RS16065;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476241.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 98295 99692 . + . ID=gene-CCO57_RS16075;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=CCO57_RS16075;old_locus_tag=CCO57_16060 NZ_NPMC01000009.1 Protein Homology CDS 98295 99692 . + 0 ID=cds-WP_000019848.1;Parent=gene-CCO57_RS16075;Dbxref=GenBank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=CCO57_RS16075;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 100080 103823 . + . ID=gene-CCO57_RS16080;Name=CCO57_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16080;old_locus_tag=CCO57_16065 NZ_NPMC01000009.1 Protein Homology CDS 100080 103823 . + 0 ID=cds-WP_094915029.1;Parent=gene-CCO57_RS16080;Dbxref=GenBank:WP_094915029.1;Name=WP_094915029.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=CCO57_RS16080;product=nitrate reductase subunit alpha;protein_id=WP_094915029.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 103820 105358 . + . ID=gene-CCO57_RS16085;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO57_RS16085;old_locus_tag=CCO57_16070 NZ_NPMC01000009.1 Protein Homology CDS 103820 105358 . + 0 ID=cds-WP_000702614.1;Parent=gene-CCO57_RS16085;Dbxref=GenBank:WP_000702614.1;Name=WP_000702614.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=CCO57_RS16085;product=nitrate reductase subunit beta;protein_id=WP_000702614.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 105355 106065 . + . ID=gene-CCO57_RS16090;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=CCO57_RS16090;old_locus_tag=CCO57_16075 NZ_NPMC01000009.1 Protein Homology CDS 105355 106065 . + 0 ID=cds-WP_000571668.1;Parent=gene-CCO57_RS16090;Dbxref=GenBank:WP_000571668.1;Name=WP_000571668.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=CCO57_RS16090;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571668.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 106065 106742 . + . ID=gene-CCO57_RS16095;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO57_RS16095;old_locus_tag=CCO57_16080 NZ_NPMC01000009.1 Protein Homology CDS 106065 106742 . + 0 ID=cds-WP_039514074.1;Parent=gene-CCO57_RS16095;Dbxref=GenBank:WP_039514074.1;Name=WP_039514074.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=CCO57_RS16095;product=respiratory nitrate reductase subunit gamma;protein_id=WP_039514074.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 106910 107464 . - . ID=gene-CCO57_RS16100;Name=CCO57_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16100;old_locus_tag=CCO57_16085 NZ_NPMC01000009.1 Protein Homology CDS 106910 107464 . - 0 ID=cds-WP_001088482.1;Parent=gene-CCO57_RS16100;Dbxref=GenBank:WP_001088482.1;Name=WP_001088482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088482.1;locus_tag=CCO57_RS16100;product=AAA family ATPase;protein_id=WP_001088482.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 107581 107711 . - . ID=gene-CCO57_RS16105;Name=CCO57_RS16105;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO57_RS16105;old_locus_tag=CCO57_16090 NZ_NPMC01000009.1 cmsearch ncRNA 107581 107711 . - . ID=rna-CCO57_RS16105;Parent=gene-CCO57_RS16105;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS16105;product=RtT sRNA NZ_NPMC01000009.1 cmsearch exon 107581 107711 . - . ID=exon-CCO57_RS16105-1;Parent=rna-CCO57_RS16105;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS16105;product=RtT sRNA NZ_NPMC01000009.1 RefSeq gene 107756 107887 . - . ID=gene-CCO57_RS16110;Name=CCO57_RS16110;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO57_RS16110;old_locus_tag=CCO57_16095 NZ_NPMC01000009.1 cmsearch ncRNA 107756 107887 . - . ID=rna-CCO57_RS16110;Parent=gene-CCO57_RS16110;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS16110;product=RtT sRNA NZ_NPMC01000009.1 cmsearch exon 107756 107887 . - . ID=exon-CCO57_RS16110-1;Parent=rna-CCO57_RS16110;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS16110;product=RtT sRNA NZ_NPMC01000009.1 RefSeq gene 107931 108015 . - . ID=gene-CCO57_RS16115;Name=CCO57_RS16115;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS16115;old_locus_tag=CCO57_16100 NZ_NPMC01000009.1 tRNAscan-SE tRNA 107931 108015 . - . ID=rna-CCO57_RS16115;Parent=gene-CCO57_RS16115;anticodon=(pos:complement(107979..107981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS16115;product=tRNA-Tyr NZ_NPMC01000009.1 tRNAscan-SE exon 107931 108015 . - . ID=exon-CCO57_RS16115-1;Parent=rna-CCO57_RS16115;anticodon=(pos:complement(107979..107981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS16115;product=tRNA-Tyr NZ_NPMC01000009.1 RefSeq gene 108050 108181 . - . ID=gene-CCO57_RS16120;Name=CCO57_RS16120;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO57_RS16120;old_locus_tag=CCO57_16105 NZ_NPMC01000009.1 cmsearch ncRNA 108050 108181 . - . ID=rna-CCO57_RS16120;Parent=gene-CCO57_RS16120;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS16120;product=RtT sRNA NZ_NPMC01000009.1 cmsearch exon 108050 108181 . - . ID=exon-CCO57_RS16120-1;Parent=rna-CCO57_RS16120;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS16120;product=RtT sRNA NZ_NPMC01000009.1 RefSeq gene 108226 108310 . - . ID=gene-CCO57_RS16125;Name=CCO57_RS16125;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO57_RS16125;old_locus_tag=CCO57_16110 NZ_NPMC01000009.1 tRNAscan-SE tRNA 108226 108310 . - . ID=rna-CCO57_RS16125;Parent=gene-CCO57_RS16125;anticodon=(pos:complement(108274..108276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS16125;product=tRNA-Tyr NZ_NPMC01000009.1 tRNAscan-SE exon 108226 108310 . - . ID=exon-CCO57_RS16125-1;Parent=rna-CCO57_RS16125;anticodon=(pos:complement(108274..108276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO57_RS16125;product=tRNA-Tyr NZ_NPMC01000009.1 RefSeq gene 108339 108480 . - . ID=gene-CCO57_RS16130;Name=CCO57_RS16130;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO57_RS16130;old_locus_tag=CCO57_16115 NZ_NPMC01000009.1 cmsearch ncRNA 108339 108480 . - . ID=rna-CCO57_RS16130;Parent=gene-CCO57_RS16130;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS16130;product=RtT sRNA NZ_NPMC01000009.1 cmsearch exon 108339 108480 . - . ID=exon-CCO57_RS16130-1;Parent=rna-CCO57_RS16130;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO57_RS16130;product=RtT sRNA NZ_NPMC01000009.1 RefSeq gene 108651 109493 . - . ID=gene-CCO57_RS16135;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=CCO57_RS16135;old_locus_tag=CCO57_16120 NZ_NPMC01000009.1 Protein Homology CDS 108651 109493 . - 0 ID=cds-WP_001191156.1;Parent=gene-CCO57_RS16135;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=CCO57_RS16135;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 109544 110002 . - . ID=gene-CCO57_RS16140;Name=CCO57_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16140;old_locus_tag=CCO57_16125 NZ_NPMC01000009.1 Protein Homology CDS 109544 110002 . - 0 ID=cds-WP_094915030.1;Parent=gene-CCO57_RS16140;Dbxref=GenBank:WP_094915030.1;Name=WP_094915030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=CCO57_RS16140;product=YchJ family protein;protein_id=WP_094915030.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 110113 111018 . + . ID=gene-CCO57_RS16145;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=CCO57_RS16145;old_locus_tag=CCO57_16130 NZ_NPMC01000009.1 Protein Homology CDS 110113 111018 . + 0 ID=cds-WP_001230575.1;Parent=gene-CCO57_RS16145;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=CCO57_RS16145;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 111109 112122 . + . ID=gene-CCO57_RS16150;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=CCO57_RS16150;old_locus_tag=CCO57_16135 NZ_NPMC01000009.1 Protein Homology CDS 111109 112122 . + 0 ID=cds-WP_000193432.1;Parent=gene-CCO57_RS16150;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=CCO57_RS16150;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 112325 113233 . + . ID=gene-CCO57_RS16155;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CCO57_RS16155;old_locus_tag=CCO57_16140 NZ_NPMC01000009.1 Protein Homology CDS 112325 113233 . + 0 ID=cds-WP_000729450.1;Parent=gene-CCO57_RS16155;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=CCO57_RS16155;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 113365 113778 . - . ID=gene-CCO57_RS16160;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=CCO57_RS16160;old_locus_tag=CCO57_16145 NZ_NPMC01000009.1 Protein Homology CDS 113365 113778 . - 0 ID=cds-WP_001287383.1;Parent=gene-CCO57_RS16160;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=CCO57_RS16160;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 114441 115058 . + . ID=gene-CCO57_RS16165;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=CCO57_RS16165;old_locus_tag=CCO57_16150 NZ_NPMC01000009.1 Protein Homology CDS 114441 115058 . + 0 ID=cds-WP_000068097.1;Parent=gene-CCO57_RS16165;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=CCO57_RS16165;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 115255 117933 . - . ID=gene-CCO57_RS16170;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=CCO57_RS16170;old_locus_tag=CCO57_16155 NZ_NPMC01000009.1 Protein Homology CDS 115255 117933 . - 0 ID=cds-WP_000301679.1;Parent=gene-CCO57_RS16170;Dbxref=GenBank:WP_000301679.1;Name=WP_000301679.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=CCO57_RS16170;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301679.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 118410 119057 . + . ID=gene-CCO57_RS16175;Name=CCO57_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16175;old_locus_tag=CCO57_16160 NZ_NPMC01000009.1 Protein Homology CDS 118410 119057 . + 0 ID=cds-WP_000615840.1;Parent=gene-CCO57_RS16175;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=CCO57_RS16175;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 119834 121465 . + . ID=gene-CCO57_RS16185;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=CCO57_RS16185;old_locus_tag=CCO57_16170 NZ_NPMC01000009.1 Protein Homology CDS 119834 121465 . + 0 ID=cds-WP_001521098.1;Parent=gene-CCO57_RS16185;Dbxref=GenBank:WP_001521098.1;Name=WP_001521098.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=CCO57_RS16185;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001521098.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 121588 122508 . + . ID=gene-CCO57_RS16190;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=CCO57_RS16190;old_locus_tag=CCO57_16175 NZ_NPMC01000009.1 Protein Homology CDS 121588 122508 . + 0 ID=cds-WP_000911097.1;Parent=gene-CCO57_RS16190;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=CCO57_RS16190;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 122523 123431 . + . ID=gene-CCO57_RS16195;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=CCO57_RS16195;old_locus_tag=CCO57_16180 NZ_NPMC01000009.1 Protein Homology CDS 122523 123431 . + 0 ID=cds-WP_000979653.1;Parent=gene-CCO57_RS16195;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=CCO57_RS16195;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 123443 124450 . + . ID=gene-CCO57_RS16200;Name=CCO57_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16200;old_locus_tag=CCO57_16185 NZ_NPMC01000009.1 Protein Homology CDS 123443 124450 . + 0 ID=cds-WP_000058857.1;Parent=gene-CCO57_RS16200;Dbxref=GenBank:WP_000058857.1;Name=WP_000058857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=CCO57_RS16200;product=ABC transporter ATP-binding protein;protein_id=WP_000058857.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 124447 125451 . + . ID=gene-CCO57_RS16205;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=CCO57_RS16205;old_locus_tag=CCO57_16190 NZ_NPMC01000009.1 Protein Homology CDS 124447 125451 . + 0 ID=cds-WP_000994698.1;Parent=gene-CCO57_RS16205;Dbxref=GenBank:WP_000994698.1;Name=WP_000994698.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=CCO57_RS16205;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994698.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 125499 126335 . + . ID=gene-CCO57_RS16210;Name=CCO57_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16210;old_locus_tag=CCO57_16195 NZ_NPMC01000009.1 Protein Homology CDS 125499 126335 . + 0 ID=cds-WP_000059074.1;Parent=gene-CCO57_RS16210;Dbxref=GenBank:WP_000059074.1;Name=WP_000059074.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=CCO57_RS16210;product=ion transporter;protein_id=WP_000059074.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 126383 126712 . - . ID=gene-CCO57_RS16215;Name=CCO57_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16215;old_locus_tag=CCO57_16200 NZ_NPMC01000009.1 Protein Homology CDS 126383 126712 . - 0 ID=cds-WP_000425070.1;Parent=gene-CCO57_RS16215;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=CCO57_RS16215;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 126746 128206 . - . ID=gene-CCO57_RS16220;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CCO57_RS16220;old_locus_tag=CCO57_16205 NZ_NPMC01000009.1 Protein Homology CDS 126746 128206 . - 0 ID=cds-WP_000206886.1;Parent=gene-CCO57_RS16220;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=CCO57_RS16220;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 128349 128522 . + . ID=gene-CCO57_RS16225;Name=CCO57_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16225;old_locus_tag=CCO57_16210 NZ_NPMC01000009.1 Protein Homology CDS 128349 128522 . + 0 ID=cds-WP_001531561.1;Parent=gene-CCO57_RS16225;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=CCO57_RS16225;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 128566 128862 . - . ID=gene-CCO57_RS16230;Name=CCO57_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16230;old_locus_tag=CCO57_16215 NZ_NPMC01000009.1 Protein Homology CDS 128566 128862 . - 0 ID=cds-WP_000967605.1;Parent=gene-CCO57_RS16230;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=CCO57_RS16230;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 129086 129814 . + . ID=gene-CCO57_RS16235;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=CCO57_RS16235;old_locus_tag=CCO57_16220 NZ_NPMC01000009.1 Protein Homology CDS 129086 129814 . + 0 ID=cds-WP_001530767.1;Parent=gene-CCO57_RS16235;Dbxref=GenBank:WP_001530767.1;Name=WP_001530767.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=CCO57_RS16235;product=TonB system transport protein TonB;protein_id=WP_001530767.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 129885 130286 . - . ID=gene-CCO57_RS16240;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=CCO57_RS16240;old_locus_tag=CCO57_16225 NZ_NPMC01000009.1 Protein Homology CDS 129885 130286 . - 0 ID=cds-WP_000210317.1;Parent=gene-CCO57_RS16240;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=CCO57_RS16240;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 130447 130986 . - . ID=gene-CCO57_RS16245;Name=CCO57_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16245;old_locus_tag=CCO57_16230 NZ_NPMC01000009.1 Protein Homology CDS 130447 130986 . - 0 ID=cds-WP_000808683.1;Parent=gene-CCO57_RS16245;Dbxref=GenBank:WP_000808683.1;Name=WP_000808683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=CCO57_RS16245;product=septation protein A;protein_id=WP_000808683.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 131043 131786 . - . ID=gene-CCO57_RS16250;Name=CCO57_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16250;old_locus_tag=CCO57_16235 NZ_NPMC01000009.1 Protein Homology CDS 131043 131786 . - 0 ID=cds-WP_000028507.1;Parent=gene-CCO57_RS16250;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=CCO57_RS16250;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 131812 132216 . - . ID=gene-CCO57_RS16255;Name=CCO57_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16255;old_locus_tag=CCO57_16240 NZ_NPMC01000009.1 Protein Homology CDS 131812 132216 . - 0 ID=cds-WP_000114955.1;Parent=gene-CCO57_RS16255;Dbxref=GenBank:WP_000114955.1;Name=WP_000114955.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=CCO57_RS16255;product=YkgJ family cysteine cluster protein;protein_id=WP_000114955.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 132553 133191 . + . ID=gene-CCO57_RS16260;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=CCO57_RS16260;old_locus_tag=CCO57_16245 NZ_NPMC01000009.1 Protein Homology CDS 132553 133191 . + 0 ID=cds-WP_000714800.1;Parent=gene-CCO57_RS16260;Dbxref=GenBank:WP_000714800.1;Name=WP_000714800.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=CCO57_RS16260;product=outer membrane protein OmpW;protein_id=WP_000714800.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 133273 134151 . - . ID=gene-CCO57_RS16265;Name=CCO57_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16265;old_locus_tag=CCO57_16250 NZ_NPMC01000009.1 Protein Homology CDS 133273 134151 . - 0 ID=cds-WP_000488354.1;Parent=gene-CCO57_RS16265;Dbxref=GenBank:WP_000488354.1;Name=WP_000488354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=CCO57_RS16265;product=manganese catalase family protein;protein_id=WP_000488354.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 134171 134677 . - . ID=gene-CCO57_RS16270;Name=CCO57_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16270;old_locus_tag=CCO57_16255 NZ_NPMC01000009.1 Protein Homology CDS 134171 134677 . - 0 ID=cds-WP_001109977.1;Parent=gene-CCO57_RS16270;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=CCO57_RS16270;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 134751 135254 . - . ID=gene-CCO57_RS16275;Name=CCO57_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16275;old_locus_tag=CCO57_16260 NZ_NPMC01000009.1 Protein Homology CDS 134751 135254 . - 0 ID=cds-WP_001022826.1;Parent=gene-CCO57_RS16275;Dbxref=GenBank:WP_001022826.1;Name=WP_001022826.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=CCO57_RS16275;product=ferritin-like domain-containing protein;protein_id=WP_001022826.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 135344 135526 . - . ID=gene-CCO57_RS16280;Name=CCO57_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16280;old_locus_tag=CCO57_16265 NZ_NPMC01000009.1 Protein Homology CDS 135344 135526 . - 0 ID=cds-WP_000807657.1;Parent=gene-CCO57_RS16280;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=CCO57_RS16280;product=general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 136006 136812 . - . ID=gene-CCO57_RS16285;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CCO57_RS16285;old_locus_tag=CCO57_16270 NZ_NPMC01000009.1 Protein Homology CDS 136006 136812 . - 0 ID=cds-WP_000443031.1;Parent=gene-CCO57_RS16285;Dbxref=GenBank:WP_000443031.1;Name=WP_000443031.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=CCO57_RS16285;product=tryptophan synthase subunit alpha;protein_id=WP_000443031.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 136812 138005 . - . ID=gene-CCO57_RS16290;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CCO57_RS16290;old_locus_tag=CCO57_16275 NZ_NPMC01000009.1 Protein Homology CDS 136812 138005 . - 0 ID=cds-WP_000209487.1;Parent=gene-CCO57_RS16290;Dbxref=GenBank:WP_000209487.1;Name=WP_000209487.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=CCO57_RS16290;product=tryptophan synthase subunit beta;protein_id=WP_000209487.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 138015 139373 . - . ID=gene-CCO57_RS16295;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=CCO57_RS16295;old_locus_tag=CCO57_16280 NZ_NPMC01000009.1 Protein Homology CDS 138015 139373 . - 0 ID=cds-WP_094915031.1;Parent=gene-CCO57_RS16295;Dbxref=GenBank:WP_094915031.1;Name=WP_094915031.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=CCO57_RS16295;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_094915031.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 139377 140972 . - . ID=gene-CCO57_RS16300;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CCO57_RS16300;old_locus_tag=CCO57_16285 NZ_NPMC01000009.1 Protein Homology CDS 139377 140972 . - 0 ID=cds-WP_094915032.1;Parent=gene-CCO57_RS16300;Dbxref=GenBank:WP_094915032.1;Name=WP_094915032.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=CCO57_RS16300;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_094915032.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 140972 142534 . - . ID=gene-CCO57_RS16305;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=CCO57_RS16305;old_locus_tag=CCO57_16290 NZ_NPMC01000009.1 Protein Homology CDS 140972 142534 . - 0 ID=cds-WP_001194069.1;Parent=gene-CCO57_RS16305;Dbxref=GenBank:WP_001194069.1;Name=WP_001194069.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=CCO57_RS16305;product=anthranilate synthase component I;protein_id=WP_001194069.1;transl_table=11 NZ_NPMC01000009.1 cmsearch sequence_feature 142557 142652 . - . ID=id-NZ_NPMC01000009.1:142557..142652;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMC01000009.1 RefSeq gene 142629 142673 . - . ID=gene-CCO57_RS16310;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=CCO57_RS16310;old_locus_tag=CCO57_16295 NZ_NPMC01000009.1 Protein Homology CDS 142629 142673 . - 0 ID=cds-WP_010989026.1;Parent=gene-CCO57_RS16310;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=CCO57_RS16310;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 142795 143676 . + . ID=gene-CCO57_RS16315;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=CCO57_RS16315;old_locus_tag=CCO57_16300 NZ_NPMC01000009.1 Protein Homology CDS 142795 143676 . + 0 ID=cds-WP_094915033.1;Parent=gene-CCO57_RS16315;Dbxref=GenBank:WP_094915033.1;Name=WP_094915033.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=CCO57_RS16315;product=RNase RNM;protein_id=WP_094915033.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 143684 144304 . + . ID=gene-CCO57_RS16320;Name=CCO57_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16320;old_locus_tag=CCO57_16305 NZ_NPMC01000009.1 Protein Homology CDS 143684 144304 . + 0 ID=cds-WP_000077250.1;Parent=gene-CCO57_RS16320;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=CCO57_RS16320;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 144405 145280 . + . ID=gene-CCO57_RS16325;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=CCO57_RS16325;old_locus_tag=CCO57_16310 NZ_NPMC01000009.1 Protein Homology CDS 144405 145280 . + 0 ID=cds-WP_001291233.1;Parent=gene-CCO57_RS16325;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=CCO57_RS16325;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 145367 145957 . - . ID=gene-CCO57_RS16330;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=CCO57_RS16330;old_locus_tag=CCO57_16315 NZ_NPMC01000009.1 Protein Homology CDS 145367 145957 . - 0 ID=cds-WP_001278865.1;Parent=gene-CCO57_RS16330;Dbxref=GenBank:WP_001278865.1;Name=WP_001278865.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=CCO57_RS16330;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278865.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 145954 146715 . - . ID=gene-CCO57_RS16335;Name=CCO57_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16335;old_locus_tag=CCO57_16320 NZ_NPMC01000009.1 Protein Homology CDS 145954 146715 . - 0 ID=cds-WP_000559310.1;Parent=gene-CCO57_RS16335;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=CCO57_RS16335;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 146953 147999 . + . ID=gene-CCO57_RS16340;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=CCO57_RS16340;old_locus_tag=CCO57_16325 NZ_NPMC01000009.1 Protein Homology CDS 146953 147999 . + 0 ID=cds-WP_000422082.1;Parent=gene-CCO57_RS16340;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=CCO57_RS16340;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 148041 148292 . - . ID=gene-CCO57_RS16345;Name=CCO57_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16345;old_locus_tag=CCO57_16330 NZ_NPMC01000009.1 Protein Homology CDS 148041 148292 . - 0 ID=cds-WP_000548616.1;Parent=gene-CCO57_RS16345;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=CCO57_RS16345;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 148695 151292 . + . ID=gene-CCO57_RS16355;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CCO57_RS16355;old_locus_tag=CCO57_16340 NZ_NPMC01000009.1 Protein Homology CDS 148695 151292 . + 0 ID=cds-WP_000513593.1;Parent=gene-CCO57_RS16355;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=CCO57_RS16355;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 151696 152670 . + . ID=gene-CCO57_RS16365;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=CCO57_RS16365;old_locus_tag=CCO57_16350 NZ_NPMC01000009.1 Protein Homology CDS 151696 152670 . + 0 ID=cds-WP_000776232.1;Parent=gene-CCO57_RS16365;Dbxref=GenBank:WP_000776232.1;Name=WP_000776232.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=CCO57_RS16365;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776232.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 152951 153091 . + . ID=gene-CCO57_RS16370;Name=CCO57_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16370;old_locus_tag=CCO57_16355 NZ_NPMC01000009.1 Protein Homology CDS 152951 153091 . + 0 ID=cds-WP_213083417.1;Parent=gene-CCO57_RS16370;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=CCO57_RS16370;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 153092 153262 . + . ID=gene-CCO57_RS16375;Name=CCO57_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16375;old_locus_tag=CCO57_16360 NZ_NPMC01000009.1 Protein Homology CDS 153092 153262 . + 0 ID=cds-WP_000029025.1;Parent=gene-CCO57_RS16375;Dbxref=GenBank:WP_000029025.1;Name=WP_000029025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=CCO57_RS16375;product=hypothetical protein;protein_id=WP_000029025.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 153372 153464 . + . ID=gene-CCO57_RS24655;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=CCO57_RS24655 NZ_NPMC01000009.1 Protein Homology CDS 153372 153464 . + 0 ID=cds-WP_223148964.1;Parent=gene-CCO57_RS24655;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=CCO57_RS24655;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 153647 156322 . + . ID=gene-CCO57_RS16385;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CCO57_RS16385;old_locus_tag=CCO57_16370 NZ_NPMC01000009.1 Protein Homology CDS 153647 156322 . + 0 ID=cds-WP_000099466.1;Parent=gene-CCO57_RS16385;Dbxref=GenBank:WP_000099466.1;Name=WP_000099466.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=CCO57_RS16385;product=aconitate hydratase AcnA;protein_id=WP_000099466.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 156378 156968 . - . ID=gene-CCO57_RS16390;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=CCO57_RS16390;old_locus_tag=CCO57_16375 NZ_NPMC01000009.1 Protein Homology CDS 156378 156968 . - 0 ID=cds-WP_001176283.1;Parent=gene-CCO57_RS16390;Dbxref=GenBank:WP_001176283.1;Name=WP_001176283.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=CCO57_RS16390;product=GTP cyclohydrolase II;protein_id=WP_001176283.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 157164 157928 . + . ID=gene-CCO57_RS16395;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=CCO57_RS16395;old_locus_tag=CCO57_16380 NZ_NPMC01000009.1 Protein Homology CDS 157164 157928 . + 0 ID=cds-WP_000948651.1;Parent=gene-CCO57_RS16395;Dbxref=GenBank:WP_000948651.1;Name=WP_000948651.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=CCO57_RS16395;product=phosphatidylglycerophosphatase B;protein_id=WP_000948651.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 158078 158386 . + . ID=gene-CCO57_RS16405;Name=CCO57_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16405;old_locus_tag=CCO57_16390 NZ_NPMC01000009.1 Protein Homology CDS 158078 158386 . + 0 ID=cds-WP_000876301.1;Parent=gene-CCO57_RS16405;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=CCO57_RS16405;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 158393 159562 . + . ID=gene-CCO57_RS16410;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=CCO57_RS16410;old_locus_tag=CCO57_16395 NZ_NPMC01000009.1 Protein Homology CDS 158393 159562 . + 0 ID=cds-WP_000891378.1;Parent=gene-CCO57_RS16410;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=CCO57_RS16410;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 159753 160490 . + . ID=gene-CCO57_RS16415;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CCO57_RS16415;old_locus_tag=CCO57_16400 NZ_NPMC01000009.1 Protein Homology CDS 159753 160490 . + 0 ID=cds-WP_094915034.1;Parent=gene-CCO57_RS16415;Dbxref=GenBank:WP_094915034.1;Name=WP_094915034.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=CCO57_RS16415;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_094915034.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 160490 160816 . + . ID=gene-CCO57_RS16420;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=CCO57_RS16420;old_locus_tag=CCO57_16405 NZ_NPMC01000009.1 Protein Homology CDS 160490 160816 . + 0 ID=cds-WP_001285199.1;Parent=gene-CCO57_RS16420;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=CCO57_RS16420;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 160936 161154 . - . ID=gene-CCO57_RS16425;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=CCO57_RS16425;old_locus_tag=CCO57_16410 NZ_NPMC01000009.1 Protein Homology CDS 160936 161154 . - 0 ID=cds-WP_058819019.1;Parent=gene-CCO57_RS16425;Dbxref=GenBank:WP_058819019.1;Name=WP_058819019.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=CCO57_RS16425;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_058819019.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 161413 162165 . - . ID=gene-CCO57_RS16430;Name=CCO57_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16430;old_locus_tag=CCO57_16415 NZ_NPMC01000009.1 Protein Homology CDS 161413 162165 . - 0 ID=cds-WP_001088594.1;Parent=gene-CCO57_RS16430;Dbxref=GenBank:WP_001088594.1;Name=WP_001088594.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=CCO57_RS16430;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088594.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 162252 162431 . - . ID=gene-CCO57_RS16435;Name=CCO57_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16435;old_locus_tag=CCO57_16420 NZ_NPMC01000009.1 Protein Homology CDS 162252 162431 . - 0 ID=cds-WP_001279854.1;Parent=gene-CCO57_RS16435;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=CCO57_RS16435;product=hypothetical protein;protein_id=WP_001279854.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 162553 164535 . - . ID=gene-CCO57_RS16440;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=CCO57_RS16440;old_locus_tag=CCO57_16425 NZ_NPMC01000009.1 Protein Homology CDS 162553 164535 . - 0 ID=cds-WP_000977604.1;Parent=gene-CCO57_RS16440;Dbxref=GenBank:WP_000977604.1;Name=WP_000977604.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=CCO57_RS16440;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000977604.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 164797 166731 . - . ID=gene-CCO57_RS16450;Name=CCO57_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16450;old_locus_tag=CCO57_16435 NZ_NPMC01000009.1 Protein Homology CDS 164797 166731 . - 0 ID=cds-WP_000485041.1;Parent=gene-CCO57_RS16450;Dbxref=GenBank:WP_000485041.1;Name=WP_000485041.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=CCO57_RS16450;product=exoribonuclease II;protein_id=WP_000485041.1;transl_table=11 NZ_NPMC01000009.1 RefSeq pseudogene 166976 167953 . - . ID=gene-CCO57_RS16455;Name=CCO57_RS16455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS16455;old_locus_tag=CCO57_16440;partial=true;pseudo=true;start_range=.,166976 NZ_NPMC01000009.1 Protein Homology CDS 166976 167953 . - 0 ID=cds-CCO57_RS16455;Parent=gene-CCO57_RS16455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=CCO57_RS16455;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,166976;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 168153 168941 . - . ID=gene-CCO57_RS16460;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CCO57_RS16460;old_locus_tag=CCO57_16445 NZ_NPMC01000009.1 Protein Homology CDS 168153 168941 . - 0 ID=cds-WP_000506501.1;Parent=gene-CCO57_RS16460;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=CCO57_RS16460;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_NPMC01000009.1 RefSeq pseudogene 169059 169359 . - . ID=gene-CCO57_RS16465;Name=CCO57_RS16465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS16465;old_locus_tag=CCO57_16450;pseudo=true NZ_NPMC01000009.1 Protein Homology CDS 169059 169359 . - 0 ID=cds-CCO57_RS16465;Parent=gene-CCO57_RS16465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=CCO57_RS16465;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 169373 169513 . - . ID=gene-CCO57_RS16470;Name=CCO57_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16470;old_locus_tag=CCO57_16455 NZ_NPMC01000009.1 Protein Homology CDS 169373 169513 . - 0 ID=cds-WP_043942882.1;Parent=gene-CCO57_RS16470;Dbxref=GenBank:WP_043942882.1;Name=WP_043942882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=CCO57_RS16470;product=hypothetical protein;protein_id=WP_043942882.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 169548 170921 . + . ID=gene-CCO57_RS16475;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=CCO57_RS16475;old_locus_tag=CCO57_16460 NZ_NPMC01000009.1 Protein Homology CDS 169548 170921 . + 0 ID=cds-WP_001116919.1;Parent=gene-CCO57_RS16475;Dbxref=GenBank:WP_001116919.1;Name=WP_001116919.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=CCO57_RS16475;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_001116919.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 171387 172094 . + . ID=gene-CCO57_RS16480;Name=CCO57_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16480;old_locus_tag=CCO57_16465 NZ_NPMC01000009.1 Protein Homology CDS 171387 172094 . + 0 ID=cds-WP_001268413.1;Parent=gene-CCO57_RS16480;Dbxref=GenBank:WP_001268413.1;Name=WP_001268413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=CCO57_RS16480;product=EAL domain-containing protein;protein_id=WP_001268413.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 172110 172916 . - . ID=gene-CCO57_RS16485;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=CCO57_RS16485;old_locus_tag=CCO57_16470 NZ_NPMC01000009.1 Protein Homology CDS 172110 172916 . - 0 ID=cds-WP_000230462.1;Parent=gene-CCO57_RS16485;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=CCO57_RS16485;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 172918 173910 . - . ID=gene-CCO57_RS16490;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=CCO57_RS16490;old_locus_tag=CCO57_16475 NZ_NPMC01000009.1 Protein Homology CDS 172918 173910 . - 0 ID=cds-WP_001128869.1;Parent=gene-CCO57_RS16490;Dbxref=GenBank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=CCO57_RS16490;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 173910 174800 . - . ID=gene-CCO57_RS16495;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=CCO57_RS16495;old_locus_tag=CCO57_16480 NZ_NPMC01000009.1 Protein Homology CDS 173910 174800 . - 0 ID=cds-WP_001146154.1;Parent=gene-CCO57_RS16495;Dbxref=GenBank:WP_001146154.1;Name=WP_001146154.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=CCO57_RS16495;product=peptide ABC transporter permease SapC;protein_id=WP_001146154.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 174787 175752 . - . ID=gene-CCO57_RS16500;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=CCO57_RS16500;old_locus_tag=CCO57_16485 NZ_NPMC01000009.1 Protein Homology CDS 174787 175752 . - 0 ID=cds-WP_000583298.1;Parent=gene-CCO57_RS16500;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=CCO57_RS16500;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 175749 177398 . - . ID=gene-CCO57_RS16505;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=CCO57_RS16505;old_locus_tag=CCO57_16490 NZ_NPMC01000009.1 Protein Homology CDS 175749 177398 . - 0 ID=cds-WP_001241628.1;Parent=gene-CCO57_RS16505;Dbxref=GenBank:WP_001241628.1;Name=WP_001241628.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=CCO57_RS16505;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241628.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 177510 178490 . - . ID=gene-CCO57_RS16510;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=CCO57_RS16510;old_locus_tag=CCO57_16495 NZ_NPMC01000009.1 Protein Homology CDS 177510 178490 . - 0 ID=cds-WP_001543112.1;Parent=gene-CCO57_RS16510;Dbxref=GenBank:WP_001543112.1;Name=WP_001543112.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=CCO57_RS16510;product=phage shock protein operon transcriptional activator;protein_id=WP_001543112.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 178661 179329 . + . ID=gene-CCO57_RS16515;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=CCO57_RS16515;old_locus_tag=CCO57_16500 NZ_NPMC01000009.1 Protein Homology CDS 178661 179329 . + 0 ID=cds-WP_000511000.1;Parent=gene-CCO57_RS16515;Dbxref=GenBank:WP_000511000.1;Name=WP_000511000.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=CCO57_RS16515;product=phage shock protein PspA;protein_id=WP_000511000.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 179389 179613 . + . ID=gene-CCO57_RS16520;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=CCO57_RS16520;old_locus_tag=CCO57_16505 NZ_NPMC01000009.1 Protein Homology CDS 179389 179613 . + 0 ID=cds-WP_001274953.1;Parent=gene-CCO57_RS16520;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=CCO57_RS16520;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 179613 179972 . + . ID=gene-CCO57_RS16525;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=CCO57_RS16525;old_locus_tag=CCO57_16510 NZ_NPMC01000009.1 Protein Homology CDS 179613 179972 . + 0 ID=cds-WP_000508938.1;Parent=gene-CCO57_RS16525;Dbxref=GenBank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=CCO57_RS16525;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 179995 180213 . + . ID=gene-CCO57_RS16530;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=CCO57_RS16530;old_locus_tag=CCO57_16515 NZ_NPMC01000009.1 Protein Homology CDS 179995 180213 . + 0 ID=cds-WP_023213818.1;Parent=gene-CCO57_RS16530;Dbxref=GenBank:WP_023213818.1;Name=WP_023213818.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=CCO57_RS16530;product=phage shock protein PspD;protein_id=WP_023213818.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 180289 180603 . + . ID=gene-CCO57_RS16535;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=CCO57_RS16535;old_locus_tag=CCO57_16520 NZ_NPMC01000009.1 Protein Homology CDS 180289 180603 . + 0 ID=cds-WP_000913428.1;Parent=gene-CCO57_RS16535;Dbxref=GenBank:WP_000913428.1;Name=WP_000913428.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=CCO57_RS16535;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913428.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 180753 182150 . + . ID=gene-CCO57_RS16540;Name=CCO57_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16540;old_locus_tag=CCO57_16525 NZ_NPMC01000009.1 Protein Homology CDS 180753 182150 . + 0 ID=cds-WP_000825860.1;Parent=gene-CCO57_RS16540;Dbxref=GenBank:WP_000825860.1;Name=WP_000825860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=CCO57_RS16540;product=YcjX family protein;protein_id=WP_000825860.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 182147 183208 . + . ID=gene-CCO57_RS16545;Name=CCO57_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16545;old_locus_tag=CCO57_16530 NZ_NPMC01000009.1 Protein Homology CDS 182147 183208 . + 0 ID=cds-WP_001294472.1;Parent=gene-CCO57_RS16545;Dbxref=GenBank:WP_001294472.1;Name=WP_001294472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=CCO57_RS16545;product=TIGR01620 family protein;protein_id=WP_001294472.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 183356 184897 . + . ID=gene-CCO57_RS16550;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=CCO57_RS16550;old_locus_tag=CCO57_16535 NZ_NPMC01000009.1 Protein Homology CDS 183356 184897 . + 0 ID=cds-WP_001235493.1;Parent=gene-CCO57_RS16550;Dbxref=GenBank:WP_001235493.1;Name=WP_001235493.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=CCO57_RS16550;product=transcriptional regulator TyrR;protein_id=WP_001235493.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 184987 185493 . - . ID=gene-CCO57_RS16555;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CCO57_RS16555;old_locus_tag=CCO57_16540 NZ_NPMC01000009.1 Protein Homology CDS 184987 185493 . - 0 ID=cds-WP_000084401.1;Parent=gene-CCO57_RS16555;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=CCO57_RS16555;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 185609 186574 . + . ID=gene-CCO57_RS16560;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=CCO57_RS16560;old_locus_tag=CCO57_16545 NZ_NPMC01000009.1 Protein Homology CDS 185609 186574 . + 0 ID=cds-WP_001258075.1;Parent=gene-CCO57_RS16560;Dbxref=GenBank:WP_001258075.1;Name=WP_001258075.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=CCO57_RS16560;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258075.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 186549 187277 . - . ID=gene-CCO57_RS16565;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=CCO57_RS16565;old_locus_tag=CCO57_16550 NZ_NPMC01000009.1 Protein Homology CDS 186549 187277 . - 0 ID=cds-WP_000219104.1;Parent=gene-CCO57_RS16565;Dbxref=GenBank:WP_000219104.1;Name=WP_000219104.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=CCO57_RS16565;product=murein tripeptide amidase MpaA;protein_id=WP_000219104.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 187467 189080 . + . ID=gene-CCO57_RS16570;Name=CCO57_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16570;old_locus_tag=CCO57_16555 NZ_NPMC01000009.1 Protein Homology CDS 187467 189080 . + 0 ID=cds-WP_001216560.1;Parent=gene-CCO57_RS16570;Dbxref=GenBank:WP_001216560.1;Name=WP_001216560.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=CCO57_RS16570;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216560.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 189300 189644 . - . ID=gene-CCO57_RS16575;Name=CCO57_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16575;old_locus_tag=CCO57_16560 NZ_NPMC01000009.1 Protein Homology CDS 189300 189644 . - 0 ID=cds-WP_000950636.1;Parent=gene-CCO57_RS16575;Dbxref=GenBank:WP_000950636.1;Name=WP_000950636.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712977.1;locus_tag=CCO57_RS16575;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000950636.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 189679 189960 . - . ID=gene-CCO57_RS16580;Name=CCO57_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16580;old_locus_tag=CCO57_16565 NZ_NPMC01000009.1 Protein Homology CDS 189679 189960 . - 0 ID=cds-WP_000323820.1;Parent=gene-CCO57_RS16580;Dbxref=GenBank:WP_000323820.1;Name=WP_000323820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706353.1;locus_tag=CCO57_RS16580;product=hypothetical protein;protein_id=WP_000323820.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 190199 190813 . - . ID=gene-CCO57_RS16585;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=CCO57_RS16585;old_locus_tag=CCO57_16570 NZ_NPMC01000009.1 Protein Homology CDS 190199 190813 . - 0 ID=cds-WP_023137145.1;Parent=gene-CCO57_RS16585;Dbxref=GenBank:WP_023137145.1;Name=WP_023137145.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465698.1;locus_tag=CCO57_RS16585;product=Tat proofreading chaperone DmsD;protein_id=WP_023137145.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 190855 191712 . - . ID=gene-CCO57_RS16590;Name=CCO57_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16590;old_locus_tag=CCO57_16575 NZ_NPMC01000009.1 Protein Homology CDS 190855 191712 . - 0 ID=cds-WP_023137144.1;Parent=gene-CCO57_RS16590;Dbxref=GenBank:WP_023137144.1;Name=WP_023137144.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=CCO57_RS16590;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_023137144.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 191714 192331 . - . ID=gene-CCO57_RS16595;Name=CCO57_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16595;old_locus_tag=CCO57_16580 NZ_NPMC01000009.1 Protein Homology CDS 191714 192331 . - 0 ID=cds-WP_000213088.1;Parent=gene-CCO57_RS16595;Dbxref=GenBank:WP_000213088.1;Name=WP_000213088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459941.1;locus_tag=CCO57_RS16595;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000213088.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 192342 194771 . - . ID=gene-CCO57_RS16600;Name=CCO57_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16600;old_locus_tag=CCO57_16585 NZ_NPMC01000009.1 Protein Homology CDS 192342 194771 . - 0 ID=cds-WP_094915035.1;Parent=gene-CCO57_RS16600;Dbxref=GenBank:WP_094915035.1;Name=WP_094915035.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805283.1;locus_tag=CCO57_RS16600;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_094915035.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 195132 196055 . - . ID=gene-CCO57_RS16605;Name=CCO57_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16605;old_locus_tag=CCO57_16590 NZ_NPMC01000009.1 Protein Homology CDS 195132 196055 . - 0 ID=cds-WP_001257182.1;Parent=gene-CCO57_RS16605;Dbxref=GenBank:WP_001257182.1;Name=WP_001257182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257182.1;locus_tag=CCO57_RS16605;product=LysR substrate-binding domain-containing protein;protein_id=WP_001257182.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 196380 197159 . + . ID=gene-CCO57_RS16610;Name=CCO57_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16610;old_locus_tag=CCO57_16595 NZ_NPMC01000009.1 Protein Homology CDS 196380 197159 . + 0 ID=cds-WP_001649234.1;Parent=gene-CCO57_RS16610;Dbxref=GenBank:WP_001649234.1;Name=WP_001649234.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=CCO57_RS16610;product=AraC family transcriptional regulator;protein_id=WP_001649234.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 197405 198592 . + . ID=gene-CCO57_RS16615;Name=CCO57_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16615;old_locus_tag=CCO57_16600 NZ_NPMC01000009.1 Protein Homology CDS 197405 198592 . + 0 ID=cds-WP_023137142.1;Parent=gene-CCO57_RS16615;Dbxref=GenBank:WP_023137142.1;Name=WP_023137142.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704980.1;locus_tag=CCO57_RS16615;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_023137142.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 198737 200041 . + . ID=gene-CCO57_RS16620;Name=CCO57_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16620;old_locus_tag=CCO57_16605 NZ_NPMC01000009.1 Protein Homology CDS 198737 200041 . + 0 ID=cds-WP_000807034.1;Parent=gene-CCO57_RS16620;Dbxref=GenBank:WP_000807034.1;Name=WP_000807034.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807034.1;locus_tag=CCO57_RS16620;product=aromatic amino acid transport family protein;protein_id=WP_000807034.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 200221 200997 . + . ID=gene-CCO57_RS16625;Name=CCO57_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16625;old_locus_tag=CCO57_16610 NZ_NPMC01000009.1 Protein Homology CDS 200221 200997 . + 0 ID=cds-WP_023137141.1;Parent=gene-CCO57_RS16625;Dbxref=GenBank:WP_023137141.1;Name=WP_023137141.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712986.1;locus_tag=CCO57_RS16625;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_023137141.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 201376 202578 . + . ID=gene-CCO57_RS16630;Name=CCO57_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16630;old_locus_tag=CCO57_16615 NZ_NPMC01000009.1 Protein Homology CDS 201376 202578 . + 0 ID=cds-WP_023137140.1;Parent=gene-CCO57_RS16630;Dbxref=GenBank:WP_023137140.1;Name=WP_023137140.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727417.1;locus_tag=CCO57_RS16630;product=MFS transporter;protein_id=WP_023137140.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 203024 203953 . - . ID=gene-CCO57_RS16635;Name=CCO57_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16635;old_locus_tag=CCO57_16620 NZ_NPMC01000009.1 Protein Homology CDS 203024 203953 . - 0 ID=cds-WP_094915036.1;Parent=gene-CCO57_RS16635;Dbxref=GenBank:WP_094915036.1;Name=WP_094915036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=CCO57_RS16635;product=aromatic alcohol reductase;protein_id=WP_094915036.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 204074 204979 . + . ID=gene-CCO57_RS16640;Name=CCO57_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16640;old_locus_tag=CCO57_16625 NZ_NPMC01000009.1 Protein Homology CDS 204074 204979 . + 0 ID=cds-WP_000359206.1;Parent=gene-CCO57_RS16640;Dbxref=GenBank:WP_000359206.1;Name=WP_000359206.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=CCO57_RS16640;product=LysR family transcriptional regulator;protein_id=WP_000359206.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 205255 206124 . + . ID=gene-CCO57_RS16645;Name=CCO57_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16645;old_locus_tag=CCO57_16630 NZ_NPMC01000009.1 Protein Homology CDS 205255 206124 . + 0 ID=cds-WP_094915037.1;Parent=gene-CCO57_RS16645;Dbxref=GenBank:WP_094915037.1;Name=WP_094915037.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=CCO57_RS16645;product=aldo/keto reductase;protein_id=WP_094915037.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 206215 206928 . - . ID=gene-CCO57_RS16650;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=CCO57_RS16650;old_locus_tag=CCO57_16635 NZ_NPMC01000009.1 Protein Homology CDS 206215 206928 . - 0 ID=cds-WP_000979084.1;Parent=gene-CCO57_RS16650;Dbxref=GenBank:WP_000979084.1;Name=WP_000979084.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=CCO57_RS16650;product=SDR family oxidoreductase;protein_id=WP_000979084.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 207006 207596 . + . ID=gene-CCO57_RS16655;Name=CCO57_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16655;old_locus_tag=CCO57_16640 NZ_NPMC01000009.1 Protein Homology CDS 207006 207596 . + 0 ID=cds-WP_000208477.1;Parent=gene-CCO57_RS16655;Dbxref=GenBank:WP_000208477.1;Name=WP_000208477.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=CCO57_RS16655;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208477.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 207725 207961 . + . ID=gene-CCO57_RS16660;Name=CCO57_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16660;old_locus_tag=CCO57_16645 NZ_NPMC01000009.1 Protein Homology CDS 207725 207961 . + 0 ID=cds-WP_001168016.1;Parent=gene-CCO57_RS16660;Dbxref=GenBank:WP_001168016.1;Name=WP_001168016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=CCO57_RS16660;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168016.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 208175 209284 . - . ID=gene-CCO57_RS16665;Name=CCO57_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16665;old_locus_tag=CCO57_16650 NZ_NPMC01000009.1 Protein Homology CDS 208175 209284 . - 0 ID=cds-WP_094915038.1;Parent=gene-CCO57_RS16665;Dbxref=GenBank:WP_094915038.1;Name=WP_094915038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=CCO57_RS16665;product=hypothetical protein;protein_id=WP_094915038.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 209674 210531 . - . ID=gene-CCO57_RS16670;Name=CCO57_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16670;old_locus_tag=CCO57_16655 NZ_NPMC01000009.1 Protein Homology CDS 209674 210531 . - 0 ID=cds-WP_077248414.1;Parent=gene-CCO57_RS16670;Dbxref=GenBank:WP_077248414.1;Name=WP_077248414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=CCO57_RS16670;product=GyrI-like domain-containing protein;protein_id=WP_077248414.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 210826 211671 . + . ID=gene-CCO57_RS16675;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=CCO57_RS16675;old_locus_tag=CCO57_16660 NZ_NPMC01000009.1 Protein Homology CDS 210826 211671 . + 0 ID=cds-WP_061377392.1;Parent=gene-CCO57_RS16675;Dbxref=GenBank:WP_061377392.1;Name=WP_061377392.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=CCO57_RS16675;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_061377392.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 211746 213728 . + . ID=gene-CCO57_RS16680;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=CCO57_RS16680;old_locus_tag=CCO57_16665 NZ_NPMC01000009.1 Protein Homology CDS 211746 213728 . + 0 ID=cds-WP_094915039.1;Parent=gene-CCO57_RS16680;Dbxref=GenBank:WP_094915039.1;Name=WP_094915039.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=CCO57_RS16680;product=two-partner secretion translocator ZirT;protein_id=WP_094915039.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 213755 214579 . + . ID=gene-CCO57_RS16685;Name=CCO57_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16685;old_locus_tag=CCO57_16670 NZ_NPMC01000009.1 Protein Homology CDS 213755 214579 . + 0 ID=cds-WP_094915040.1;Parent=gene-CCO57_RS16685;Dbxref=GenBank:WP_094915040.1;Name=WP_094915040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666973.1;locus_tag=CCO57_RS16685;product=ZirS family two-partner secretion-like system exoprotein;protein_id=WP_094915040.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 214675 215232 . + . ID=gene-CCO57_RS16690;Name=CCO57_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16690;old_locus_tag=CCO57_16675 NZ_NPMC01000009.1 Protein Homology CDS 214675 215232 . + 0 ID=cds-WP_001062618.1;Parent=gene-CCO57_RS16690;Dbxref=GenBank:WP_001062618.1;Name=WP_001062618.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=CCO57_RS16690;product=redoxin family protein;protein_id=WP_001062618.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 215337 215675 . - . ID=gene-CCO57_RS16695;Name=CCO57_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16695;old_locus_tag=CCO57_16680 NZ_NPMC01000009.1 Protein Homology CDS 215337 215675 . - 0 ID=cds-WP_063916796.1;Parent=gene-CCO57_RS16695;Dbxref=GenBank:WP_063916796.1;Name=WP_063916796.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=CCO57_RS16695;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_063916796.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 215703 216389 . - . ID=gene-CCO57_RS16700;Name=CCO57_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16700;old_locus_tag=CCO57_16685 NZ_NPMC01000009.1 Protein Homology CDS 215703 216389 . - 0 ID=cds-WP_094915041.1;Parent=gene-CCO57_RS16700;Dbxref=GenBank:WP_094915041.1;Name=WP_094915041.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=CCO57_RS16700;product=B3/B4 domain-containing protein;protein_id=WP_094915041.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 216433 217035 . + . ID=gene-CCO57_RS16705;Name=CCO57_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16705;old_locus_tag=CCO57_16690 NZ_NPMC01000009.1 Protein Homology CDS 216433 217035 . + 0 ID=cds-WP_000163368.1;Parent=gene-CCO57_RS16705;Dbxref=GenBank:WP_000163368.1;Name=WP_000163368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=CCO57_RS16705;product=helix-turn-helix domain-containing protein;protein_id=WP_000163368.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 217117 218148 . - . ID=gene-CCO57_RS16710;Name=CCO57_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16710;old_locus_tag=CCO57_16695 NZ_NPMC01000009.1 Protein Homology CDS 217117 218148 . - 0 ID=cds-WP_024155172.1;Parent=gene-CCO57_RS16710;Dbxref=GenBank:WP_024155172.1;Name=WP_024155172.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=CCO57_RS16710;product=mechanosensitive ion channel family protein;protein_id=WP_024155172.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 218387 218641 . + . ID=gene-CCO57_RS16715;Name=CCO57_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16715;old_locus_tag=CCO57_16700 NZ_NPMC01000009.1 Protein Homology CDS 218387 218641 . + 0 ID=cds-WP_000605645.1;Parent=gene-CCO57_RS16715;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=CCO57_RS16715;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 218696 219643 . - . ID=gene-CCO57_RS16720;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=CCO57_RS16720;old_locus_tag=CCO57_16705 NZ_NPMC01000009.1 Protein Homology CDS 218696 219643 . - 0 ID=cds-WP_001262138.1;Parent=gene-CCO57_RS16720;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=CCO57_RS16720;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 219794 220546 . - . ID=gene-CCO57_RS16725;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=CCO57_RS16725;old_locus_tag=CCO57_16710 NZ_NPMC01000009.1 Protein Homology CDS 219794 220546 . - 0 ID=cds-WP_000611914.1;Parent=gene-CCO57_RS16725;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=CCO57_RS16725;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 220742 221257 . - . ID=gene-CCO57_RS16730;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=CCO57_RS16730;old_locus_tag=CCO57_16715 NZ_NPMC01000009.1 Protein Homology CDS 220742 221257 . - 0 ID=cds-WP_000945034.1;Parent=gene-CCO57_RS16730;Dbxref=GenBank:WP_000945034.1;Name=WP_000945034.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=CCO57_RS16730;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945034.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 221515 222078 . + . ID=gene-CCO57_RS16735;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=CCO57_RS16735;old_locus_tag=CCO57_16720 NZ_NPMC01000009.1 Protein Homology CDS 221515 222078 . + 0 ID=cds-WP_001046799.1;Parent=gene-CCO57_RS16735;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=CCO57_RS16735;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 222489 223643 . + . ID=gene-CCO57_RS16745;Name=CCO57_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16745;old_locus_tag=CCO57_16730 NZ_NPMC01000009.1 Protein Homology CDS 222489 223643 . + 0 ID=cds-WP_094915043.1;Parent=gene-CCO57_RS16745;Dbxref=GenBank:WP_094915043.1;Name=WP_094915043.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=CCO57_RS16745;product=methyl-accepting chemotaxis protein;protein_id=WP_094915043.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 223789 224772 . + . ID=gene-CCO57_RS16750;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=CCO57_RS16750;old_locus_tag=CCO57_16735 NZ_NPMC01000009.1 Protein Homology CDS 223789 224772 . + 0 ID=cds-WP_000387370.1;Parent=gene-CCO57_RS16750;Dbxref=GenBank:WP_000387370.1;Name=WP_000387370.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=CCO57_RS16750;product=zinc transporter ZntB;protein_id=WP_000387370.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 225048 225230 . + . ID=gene-CCO57_RS24990;Name=CCO57_RS24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS24990;old_locus_tag=CCO57_16740 NZ_NPMC01000009.1 Protein Homology CDS 225048 225230 . + 0 ID=cds-WP_015405931.1;Parent=gene-CCO57_RS24990;Dbxref=GenBank:WP_015405931.1;Name=WP_015405931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=CCO57_RS24990;product=hypothetical protein;protein_id=WP_015405931.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 225259 226632 . + . ID=gene-CCO57_RS16760;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=CCO57_RS16760;old_locus_tag=CCO57_16745 NZ_NPMC01000009.1 Protein Homology CDS 225259 226632 . + 0 ID=cds-WP_094915044.1;Parent=gene-CCO57_RS16760;Dbxref=GenBank:WP_094915044.1;Name=WP_094915044.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=CCO57_RS16760;product=ATP-dependent RNA helicase DbpA;protein_id=WP_094915044.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 226676 227611 . - . ID=gene-CCO57_RS16765;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=CCO57_RS16765;old_locus_tag=CCO57_16750 NZ_NPMC01000009.1 Protein Homology CDS 226676 227611 . - 0 ID=cds-WP_001156208.1;Parent=gene-CCO57_RS16765;Dbxref=GenBank:WP_001156208.1;Name=WP_001156208.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=CCO57_RS16765;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001156208.1;transl_table=11 NZ_NPMC01000009.1 RefSeq pseudogene 227717 227869 . - . ID=gene-CCO57_RS16770;Name=CCO57_RS16770;end_range=227869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO57_RS16770;old_locus_tag=CCO57_16755;partial=true;pseudo=true NZ_NPMC01000009.1 Protein Homology CDS 227717 227869 . - 0 ID=cds-CCO57_RS16770;Parent=gene-CCO57_RS16770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=227869,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=CCO57_RS16770;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 228299 231721 . + . ID=gene-CCO57_RS16775;Name=CCO57_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16775;old_locus_tag=CCO57_16760 NZ_NPMC01000009.1 Protein Homology CDS 228299 231721 . + 0 ID=cds-WP_094888691.1;Parent=gene-CCO57_RS16775;Dbxref=GenBank:WP_094888691.1;Name=WP_094888691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=CCO57_RS16775;product=DUF4765 family protein;protein_id=WP_094888691.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 231996 232334 . + . ID=gene-CCO57_RS16785;Name=CCO57_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO57_RS16785;old_locus_tag=CCO57_16770 NZ_NPMC01000009.1 Protein Homology CDS 231996 232334 . + 0 ID=cds-WP_000159242.1;Parent=gene-CCO57_RS16785;Dbxref=GenBank:WP_000159242.1;Name=WP_000159242.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=CCO57_RS16785;product=SMR family transporter;protein_id=WP_000159242.1;transl_table=11 NZ_NPMC01000009.1 RefSeq gene 232387 232821 . - . ID=gene-CCO57_RS16790;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=CCO57_RS16790;old_locus_tag=CCO57_16775 NZ_NPMC01000009.1 Protein Homology CDS 232387 232821 . - 0 ID=cds-WP_001082296.1;Parent=gene-CCO57_RS16790;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=CCO57_RS16790;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 ###