##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM226617v1 #!genome-build-accession NCBI_Assembly:GCF_002266175.1 #!annotation-date 04/15/2025 21:46:20 #!annotation-source NCBI RefSeq GCF_002266175.1-RS_2025_04_15 ##sequence-region NZ_NPMB01000001.1 1 614174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000001.1 RefSeq region 1 614174 . + . ID=NZ_NPMB01000001.1:1..614174;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000001.1 RefSeq gene 1 234 . + . ID=gene-CCO56_RS00005;Name=CCO56_RS00005;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS00005;old_locus_tag=CCO56_00005;partial=true;start_range=.,1 NZ_NPMB01000001.1 cmsearch rRNA 1 234 . + . ID=rna-CCO56_RS00005;Parent=gene-CCO56_RS00005;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS00005;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000001.1 cmsearch exon 1 234 . + . ID=exon-CCO56_RS00005-1;Parent=rna-CCO56_RS00005;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS00005;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000001.1 RefSeq gene 330 445 . + . ID=gene-CCO56_RS00010;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO56_RS00010;old_locus_tag=CCO56_00010 NZ_NPMB01000001.1 cmsearch rRNA 330 445 . + . ID=rna-CCO56_RS00010;Parent=gene-CCO56_RS00010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS00010;product=5S ribosomal RNA NZ_NPMB01000001.1 cmsearch exon 330 445 . + . ID=exon-CCO56_RS00010-1;Parent=rna-CCO56_RS00010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS00010;product=5S ribosomal RNA NZ_NPMB01000001.1 RefSeq gene 636 712 . + . ID=gene-CCO56_RS00015;Name=CCO56_RS00015;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS00015;old_locus_tag=CCO56_00015 NZ_NPMB01000001.1 tRNAscan-SE tRNA 636 712 . + . ID=rna-CCO56_RS00015;Parent=gene-CCO56_RS00015;anticodon=(pos:670..672);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS00015;product=tRNA-Asp NZ_NPMB01000001.1 tRNAscan-SE exon 636 712 . + . ID=exon-CCO56_RS00015-1;Parent=rna-CCO56_RS00015;anticodon=(pos:670..672);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS00015;product=tRNA-Asp NZ_NPMB01000001.1 RefSeq gene 877 1680 . + . ID=gene-CCO56_RS00020;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=CCO56_RS00020;old_locus_tag=CCO56_00020 NZ_NPMB01000001.1 Protein Homology CDS 877 1680 . + 0 ID=cds-WP_080177352.1;Parent=gene-CCO56_RS00020;Dbxref=GenBank:WP_080177352.1;Name=WP_080177352.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=CCO56_RS00020;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_080177352.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 1702 2616 . - . ID=gene-CCO56_RS00025;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=CCO56_RS00025;old_locus_tag=CCO56_00025 NZ_NPMB01000001.1 Protein Homology CDS 1702 2616 . - 0 ID=cds-WP_000648527.1;Parent=gene-CCO56_RS00025;Dbxref=GenBank:WP_000648527.1;Name=WP_000648527.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=CCO56_RS00025;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648527.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 2721 3896 . + . ID=gene-CCO56_RS00030;Name=CCO56_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00030;old_locus_tag=CCO56_00030 NZ_NPMB01000001.1 Protein Homology CDS 2721 3896 . + 0 ID=cds-WP_001127556.1;Parent=gene-CCO56_RS00030;Dbxref=GenBank:WP_001127556.1;Name=WP_001127556.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=CCO56_RS00030;product=MFS transporter;protein_id=WP_001127556.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 4028 4828 . + . ID=gene-CCO56_RS00035;Name=CCO56_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00035;old_locus_tag=CCO56_00035 NZ_NPMB01000001.1 Protein Homology CDS 4028 4828 . + 0 ID=cds-WP_001230969.1;Parent=gene-CCO56_RS00035;Dbxref=GenBank:WP_001230969.1;Name=WP_001230969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=CCO56_RS00035;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230969.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 4906 5676 . + . ID=gene-CCO56_RS00040;Name=CCO56_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00040;old_locus_tag=CCO56_00040 NZ_NPMB01000001.1 Protein Homology CDS 4906 5676 . + 0 ID=cds-WP_080177351.1;Parent=gene-CCO56_RS00040;Dbxref=GenBank:WP_080177351.1;Name=WP_080177351.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=CCO56_RS00040;product=class I SAM-dependent methyltransferase;protein_id=WP_080177351.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 5732 7099 . - . ID=gene-CCO56_RS00045;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=CCO56_RS00045;old_locus_tag=CCO56_00045 NZ_NPMB01000001.1 Protein Homology CDS 5732 7099 . - 0 ID=cds-WP_000644706.1;Parent=gene-CCO56_RS00045;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=CCO56_RS00045;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 7171 7926 . - . ID=gene-CCO56_RS00050;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=CCO56_RS00050;old_locus_tag=CCO56_00050 NZ_NPMB01000001.1 Protein Homology CDS 7171 7926 . - 0 ID=cds-WP_001642646.1;Parent=gene-CCO56_RS00050;Dbxref=GenBank:WP_001642646.1;Name=WP_001642646.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=CCO56_RS00050;product=hydroxyacylglutathione hydrolase;protein_id=WP_001642646.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 7961 8683 . + . ID=gene-CCO56_RS00055;Name=CCO56_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00055;old_locus_tag=CCO56_00055 NZ_NPMB01000001.1 Protein Homology CDS 7961 8683 . + 0 ID=cds-WP_000801238.1;Parent=gene-CCO56_RS00055;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=CCO56_RS00055;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 8680 9147 . - . ID=gene-CCO56_RS00060;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=CCO56_RS00060;old_locus_tag=CCO56_00060 NZ_NPMB01000001.1 Protein Homology CDS 8680 9147 . - 0 ID=cds-WP_000917872.1;Parent=gene-CCO56_RS00060;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=CCO56_RS00060;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 9211 9942 . + . ID=gene-CCO56_RS00065;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=CCO56_RS00065;old_locus_tag=CCO56_00065 NZ_NPMB01000001.1 Protein Homology CDS 9211 9942 . + 0 ID=cds-WP_001562201.1;Parent=gene-CCO56_RS00065;Dbxref=GenBank:WP_001562201.1;Name=WP_001562201.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=CCO56_RS00065;product=DNA polymerase III subunit epsilon;protein_id=WP_001562201.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 10076 10152 . + . ID=gene-CCO56_RS00070;Name=CCO56_RS00070;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS00070;old_locus_tag=CCO56_00070 NZ_NPMB01000001.1 tRNAscan-SE tRNA 10076 10152 . + . ID=rna-CCO56_RS00070;Parent=gene-CCO56_RS00070;anticodon=(pos:10110..10112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS00070;product=tRNA-Asp NZ_NPMB01000001.1 tRNAscan-SE exon 10076 10152 . + . ID=exon-CCO56_RS00070-1;Parent=rna-CCO56_RS00070;anticodon=(pos:10110..10112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS00070;product=tRNA-Asp NZ_NPMB01000001.1 RefSeq gene 10473 11522 . - . ID=gene-CCO56_RS00075;Name=CCO56_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00075;old_locus_tag=CCO56_00075 NZ_NPMB01000001.1 Protein Homology CDS 10473 11522 . - 0 ID=cds-WP_080177350.1;Parent=gene-CCO56_RS00075;Dbxref=GenBank:WP_080177350.1;Name=WP_080177350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=CCO56_RS00075;product=ImpA family type VI secretion system protein;protein_id=WP_080177350.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 11533 12528 . - . ID=gene-CCO56_RS00080;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=CCO56_RS00080;old_locus_tag=CCO56_00080 NZ_NPMB01000001.1 Protein Homology CDS 11533 12528 . - 0 ID=cds-WP_000145239.1;Parent=gene-CCO56_RS00080;Dbxref=GenBank:WP_000145239.1;Name=WP_000145239.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=CCO56_RS00080;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000145239.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 12525 14408 . - . ID=gene-CCO56_RS00085;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=CCO56_RS00085;old_locus_tag=CCO56_00085 NZ_NPMB01000001.1 Protein Homology CDS 12525 14408 . - 0 ID=cds-WP_079900551.1;Parent=gene-CCO56_RS00085;Dbxref=GenBank:WP_079900551.1;Name=WP_079900551.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=CCO56_RS00085;product=type VI secretion system baseplate subunit TssF;protein_id=WP_079900551.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 14424 14918 . - . ID=gene-CCO56_RS00090;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=CCO56_RS00090;old_locus_tag=CCO56_00090 NZ_NPMB01000001.1 Protein Homology CDS 14424 14918 . - 0 ID=cds-WP_000108007.1;Parent=gene-CCO56_RS00090;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=CCO56_RS00090;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 14915 15739 . - . ID=gene-CCO56_RS00095;Name=CCO56_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00095;old_locus_tag=CCO56_00095 NZ_NPMB01000001.1 Protein Homology CDS 14915 15739 . - 0 ID=cds-WP_001602331.1;Parent=gene-CCO56_RS00095;Dbxref=GenBank:WP_001602331.1;Name=WP_001602331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=CCO56_RS00095;product=type VI secretion system accessory protein TagJ;protein_id=WP_001602331.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 15726 16628 . - . ID=gene-CCO56_RS00100;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=CCO56_RS00100;old_locus_tag=CCO56_00100 NZ_NPMB01000001.1 Protein Homology CDS 15726 16628 . - 0 ID=cds-WP_080177349.1;Parent=gene-CCO56_RS00100;Dbxref=GenBank:WP_080177349.1;Name=WP_080177349.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=CCO56_RS00100;product=type VI secretion system-associated protein TagK;protein_id=WP_080177349.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 16997 19660 . + . ID=gene-CCO56_RS00105;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=CCO56_RS00105;old_locus_tag=CCO56_00105 NZ_NPMB01000001.1 Protein Homology CDS 16997 19660 . + 0 ID=cds-WP_000449780.1;Parent=gene-CCO56_RS00105;Dbxref=GenBank:WP_000449780.1;Name=WP_000449780.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000449792.1;locus_tag=CCO56_RS00105;product=type VI secretion system ATPase TssH;protein_id=WP_000449780.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 19746 20036 . + . ID=gene-CCO56_RS00110;Name=CCO56_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00110;old_locus_tag=CCO56_00110 NZ_NPMB01000001.1 Protein Homology CDS 19746 20036 . + 0 ID=cds-WP_000175471.1;Parent=gene-CCO56_RS00110;Dbxref=GenBank:WP_000175471.1;Name=WP_000175471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175185.1;locus_tag=CCO56_RS00110;product=hypothetical protein;protein_id=WP_000175471.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 20098 20640 . + . ID=gene-CCO56_RS00115;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=CCO56_RS00115;old_locus_tag=CCO56_00115 NZ_NPMB01000001.1 Protein Homology CDS 20098 20640 . + 0 ID=cds-WP_000996815.1;Parent=gene-CCO56_RS00115;Dbxref=GenBank:WP_000996815.1;Name=WP_000996815.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=CCO56_RS00115;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996815.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 20664 22172 . + . ID=gene-CCO56_RS00120;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=CCO56_RS00120;old_locus_tag=CCO56_00120 NZ_NPMB01000001.1 Protein Homology CDS 20664 22172 . + 0 ID=cds-WP_000013884.1;Parent=gene-CCO56_RS00120;Dbxref=GenBank:WP_000013884.1;Name=WP_000013884.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=CCO56_RS00120;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013884.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 22187 22345 . + . ID=gene-CCO56_RS00125;Name=CCO56_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00125;old_locus_tag=CCO56_00125 NZ_NPMB01000001.1 Protein Homology CDS 22187 22345 . + 0 ID=cds-WP_001584850.1;Parent=gene-CCO56_RS00125;Dbxref=GenBank:WP_001584850.1;Name=WP_001584850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033857.1;locus_tag=CCO56_RS00125;product=BPSL0067 family protein;protein_id=WP_001584850.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 22358 22804 . + . ID=gene-CCO56_RS00130;Name=CCO56_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00130;old_locus_tag=CCO56_00130 NZ_NPMB01000001.1 Protein Homology CDS 22358 22804 . + 0 ID=cds-WP_336603264.1;Parent=gene-CCO56_RS00130;Dbxref=GenBank:WP_336603264.1;Name=WP_336603264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535435.1;locus_tag=CCO56_RS00130;product=STY0301 family protein;protein_id=WP_336603264.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 23058 23543 . + . ID=gene-CCO56_RS00135;Name=CCO56_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00135;old_locus_tag=CCO56_00135 NZ_NPMB01000001.1 Protein Homology CDS 23058 23543 . + 0 ID=cds-WP_000312802.1;Parent=gene-CCO56_RS00135;Dbxref=GenBank:WP_000312802.1;Name=WP_000312802.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=CCO56_RS00135;product=Hcp family type VI secretion system effector;protein_id=WP_000312802.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 23611 23794 . + . ID=gene-CCO56_RS23600;Name=CCO56_RS23600;end_range=23794,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23600;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 23611 23794 . + 0 ID=cds-CCO56_RS23600;Parent=gene-CCO56_RS23600;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23794,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO56_RS23600;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 23837 24322 . + . ID=gene-CCO56_RS00145;Name=CCO56_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00145;old_locus_tag=CCO56_00145 NZ_NPMB01000001.1 Protein Homology CDS 23837 24322 . + 0 ID=cds-WP_001081548.1;Parent=gene-CCO56_RS00145;Dbxref=GenBank:WP_001081548.1;Name=WP_001081548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=CCO56_RS00145;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081548.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 24307 24690 . + . ID=gene-CCO56_RS00150;Name=CCO56_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00150;old_locus_tag=CCO56_00150 NZ_NPMB01000001.1 Protein Homology CDS 24307 24690 . + 0 ID=cds-WP_000379083.1;Parent=gene-CCO56_RS00150;Dbxref=GenBank:WP_000379083.1;Name=WP_000379083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=CCO56_RS00150;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379083.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 24833 25318 . + . ID=gene-CCO56_RS00155;Name=CCO56_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00155;old_locus_tag=CCO56_00155 NZ_NPMB01000001.1 Protein Homology CDS 24833 25318 . + 0 ID=cds-WP_094882023.1;Parent=gene-CCO56_RS00155;Dbxref=GenBank:WP_094882023.1;Name=WP_094882023.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=CCO56_RS00155;product=Hcp family type VI secretion system effector;protein_id=WP_094882023.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 25385 25921 . + . ID=gene-CCO56_RS00160;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=CCO56_RS00160;old_locus_tag=CCO56_00160 NZ_NPMB01000001.1 Protein Homology CDS 25385 25921 . + 0 ID=cds-WP_001045934.1;Parent=gene-CCO56_RS00160;Dbxref=GenBank:WP_001045934.1;Name=WP_001045934.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO56_RS00160;product=type VI secretion system lipoprotein TssJ;protein_id=WP_001045934.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 25925 27268 . + . ID=gene-CCO56_RS00165;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=CCO56_RS00165;old_locus_tag=CCO56_00165 NZ_NPMB01000001.1 Protein Homology CDS 25925 27268 . + 0 ID=cds-WP_000118728.1;Parent=gene-CCO56_RS00165;Dbxref=GenBank:WP_000118728.1;Name=WP_000118728.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=CCO56_RS00165;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118728.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 27265 28569 . + . ID=gene-CCO56_RS00170;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=CCO56_RS00170;old_locus_tag=CCO56_00170 NZ_NPMB01000001.1 Protein Homology CDS 27265 28569 . + 0 ID=cds-WP_000132488.1;Parent=gene-CCO56_RS00170;Dbxref=GenBank:WP_000132488.1;Name=WP_000132488.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=CCO56_RS00170;product=type VI secretion system protein TssL%2C long form;protein_id=WP_000132488.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 28574 29347 . + . ID=gene-CCO56_RS00175;Name=CCO56_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00175;old_locus_tag=CCO56_00175 NZ_NPMB01000001.1 Protein Homology CDS 28574 29347 . + 0 ID=cds-WP_000976542.1;Parent=gene-CCO56_RS00175;Dbxref=GenBank:WP_000976542.1;Name=WP_000976542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=CCO56_RS00175;product=Rap1a/Tai family immunity protein;protein_id=WP_000976542.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 29550 29958 . + . ID=gene-CCO56_RS00185;Name=CCO56_RS00185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS00185;old_locus_tag=CCO56_00185;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 29550 29958 . + 0 ID=cds-CCO56_RS00185;Parent=gene-CCO56_RS00185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=CCO56_RS00185;product=Shiga toxin A subunit;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 29992 33861 . + . ID=gene-CCO56_RS00190;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=CCO56_RS00190;old_locus_tag=CCO56_00190 NZ_NPMB01000001.1 Protein Homology CDS 29992 33861 . + 0 ID=cds-WP_023251617.1;Parent=gene-CCO56_RS00190;Dbxref=GenBank:WP_023251617.1;Name=WP_023251617.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=CCO56_RS00190;product=Type VI secretion protein IcmF;protein_id=WP_023251617.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 33861 34628 . + . ID=gene-CCO56_RS00195;Name=CCO56_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00195;old_locus_tag=CCO56_00195 NZ_NPMB01000001.1 Protein Homology CDS 33861 34628 . + 0 ID=cds-WP_001254132.1;Parent=gene-CCO56_RS00195;Dbxref=GenBank:WP_001254132.1;Name=WP_001254132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=CCO56_RS00195;product=TagF domain-containing protein;protein_id=WP_001254132.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 34671 35141 . + . ID=gene-CCO56_RS00200;Name=CCO56_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00200;old_locus_tag=CCO56_00200 NZ_NPMB01000001.1 Protein Homology CDS 34671 35141 . + 0 ID=cds-WP_000501512.1;Parent=gene-CCO56_RS00200;Dbxref=GenBank:WP_000501512.1;Name=WP_000501512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000501515.1;locus_tag=CCO56_RS00200;product=glucosaminidase domain-containing protein;protein_id=WP_000501512.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 35126 35599 . + . ID=gene-CCO56_RS00205;Name=CCO56_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00205;old_locus_tag=CCO56_00205 NZ_NPMB01000001.1 Protein Homology CDS 35126 35599 . + 0 ID=cds-WP_000491748.1;Parent=gene-CCO56_RS00205;Dbxref=GenBank:WP_000491748.1;Name=WP_000491748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506348.1;locus_tag=CCO56_RS00205;product=hypothetical protein;protein_id=WP_000491748.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 35703 36172 . + . ID=gene-CCO56_RS00210;Name=CCO56_RS00210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS00210;old_locus_tag=CCO56_00210;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 35703 36172 . + 0 ID=cds-CCO56_RS00210;Parent=gene-CCO56_RS00210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=CCO56_RS00210;product=glucosaminidase domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 36157 36618 . + . ID=gene-CCO56_RS00215;Name=CCO56_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00215;old_locus_tag=CCO56_00215 NZ_NPMB01000001.1 Protein Homology CDS 36157 36618 . + 0 ID=cds-WP_061377697.1;Parent=gene-CCO56_RS00215;Dbxref=GenBank:WP_061377697.1;Name=WP_061377697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=CCO56_RS00215;product=hypothetical protein;protein_id=WP_061377697.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 36627 36755 . + . ID=gene-CCO56_RS23580;Name=CCO56_RS23580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23580;partial=true;pseudo=true;start_range=.,36627 NZ_NPMB01000001.1 Protein Homology CDS 36627 36755 . + 0 ID=cds-CCO56_RS23580;Parent=gene-CCO56_RS23580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254123.1;locus_tag=CCO56_RS23580;partial=true;product=TagF domain-containing protein;pseudo=true;start_range=.,36627;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 36805 37536 . + . ID=gene-CCO56_RS00220;Name=CCO56_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00220;old_locus_tag=CCO56_00220 NZ_NPMB01000001.1 Protein Homology CDS 36805 37536 . + 0 ID=cds-WP_000040884.1;Parent=gene-CCO56_RS00220;Dbxref=GenBank:WP_000040884.1;Name=WP_000040884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040885.1;locus_tag=CCO56_RS00220;product=hypothetical protein;protein_id=WP_000040884.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 37533 37967 . + . ID=gene-CCO56_RS00225;Name=CCO56_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00225;old_locus_tag=CCO56_00225 NZ_NPMB01000001.1 Protein Homology CDS 37533 37967 . + 0 ID=cds-WP_023208175.1;Parent=gene-CCO56_RS00225;Dbxref=GenBank:WP_023208175.1;Name=WP_023208175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000616626.1;locus_tag=CCO56_RS00225;product=hypothetical protein;protein_id=WP_023208175.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 38147 38293 . + . ID=gene-CCO56_RS23500;Name=CCO56_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23500 NZ_NPMB01000001.1 Protein Homology CDS 38147 38293 . + 0 ID=cds-WP_023208174.1;Parent=gene-CCO56_RS23500;Dbxref=GenBank:WP_023208174.1;Name=WP_023208174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551999.1;locus_tag=CCO56_RS23500;product=hypothetical protein;protein_id=WP_023208174.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 38290 38657 . + . ID=gene-CCO56_RS23605;Name=CCO56_RS23605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23605;old_locus_tag=CCO56_00230;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 38290 38657 . + 0 ID=cds-CCO56_RS23605;Parent=gene-CCO56_RS23605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706217.1;locus_tag=CCO56_RS23605;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 38682 40886 . + . ID=gene-CCO56_RS00235;Name=CCO56_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00235;old_locus_tag=CCO56_00235 NZ_NPMB01000001.1 Protein Homology CDS 38682 40886 . + 0 ID=cds-WP_000011497.1;Parent=gene-CCO56_RS00235;Dbxref=GenBank:WP_000011497.1;Name=WP_000011497.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=CCO56_RS00235;product=type VI secretion system Vgr family protein;protein_id=WP_000011497.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 40910 41356 . + . ID=gene-CCO56_RS00240;Name=CCO56_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00240;old_locus_tag=CCO56_00240 NZ_NPMB01000001.1 Protein Homology CDS 40910 41356 . + 0 ID=cds-WP_000375833.1;Parent=gene-CCO56_RS00240;Dbxref=GenBank:WP_000375833.1;Name=WP_000375833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459288.1;locus_tag=CCO56_RS00240;product=DcrB-related protein;protein_id=WP_000375833.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 41375 45454 . + . ID=gene-CCO56_RS00245;Name=CCO56_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00245;old_locus_tag=CCO56_00245 NZ_NPMB01000001.1 Protein Homology CDS 41375 45454 . + 0 ID=cds-WP_000272659.1;Parent=gene-CCO56_RS00245;Dbxref=GenBank:WP_000272659.1;Name=WP_000272659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272651.1;locus_tag=CCO56_RS00245;product=polymorphic toxin type 47 domain-containing protein;protein_id=WP_000272659.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 45448 45894 . + . ID=gene-CCO56_RS00250;Name=sciX;gbkey=Gene;gene=sciX;gene_biotype=protein_coding;locus_tag=CCO56_RS00250;old_locus_tag=CCO56_00250 NZ_NPMB01000001.1 Protein Homology CDS 45448 45894 . + 0 ID=cds-WP_000935097.1;Parent=gene-CCO56_RS00250;Dbxref=GenBank:WP_000935097.1;Name=WP_000935097.1;gbkey=CDS;gene=sciX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459291.1;locus_tag=CCO56_RS00250;product=protein SciX;protein_id=WP_000935097.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 46280 46426 . + . ID=gene-CCO56_RS23505;Name=CCO56_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23505 NZ_NPMB01000001.1 Protein Homology CDS 46280 46426 . + 0 ID=cds-WP_000723740.1;Parent=gene-CCO56_RS23505;Dbxref=GenBank:WP_000723740.1;Name=WP_000723740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723740.1;locus_tag=CCO56_RS23505;product=hypothetical protein;protein_id=WP_000723740.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 46413 46895 . + . ID=gene-CCO56_RS00255;Name=CCO56_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00255;old_locus_tag=CCO56_00255 NZ_NPMB01000001.1 Protein Homology CDS 46413 46895 . + 0 ID=cds-WP_023208170.1;Parent=gene-CCO56_RS00255;Dbxref=GenBank:WP_023208170.1;Name=WP_023208170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120036.1;locus_tag=CCO56_RS00255;product=Imm26 family immunity protein;protein_id=WP_023208170.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 47089 47373 . - . ID=gene-CCO56_RS00260;Name=CCO56_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00260;old_locus_tag=CCO56_00260 NZ_NPMB01000001.1 Protein Homology CDS 47089 47373 . - 0 ID=cds-WP_225982924.1;Parent=gene-CCO56_RS00260;Dbxref=GenBank:WP_225982924.1;Name=WP_225982924.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: protein motif:HMM:NF020421.6;locus_tag=CCO56_RS00260;product=SymE family type I addiction module toxin;protein_id=WP_225982924.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 47332 47505 . + . ID=gene-CCO56_RS23610;Name=CCO56_RS23610;end_range=47505,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23610;old_locus_tag=CCO56_00265;partial=true;pseudo=true;start_range=.,47332 NZ_NPMB01000001.1 Protein Homology CDS 47332 47505 . + 0 ID=cds-CCO56_RS23610;Parent=gene-CCO56_RS23610;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=47505,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=CCO56_RS23610;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,47332;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 47636 47914 . + . ID=gene-CCO56_RS00270;Name=CCO56_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00270;old_locus_tag=CCO56_00270 NZ_NPMB01000001.1 Protein Homology CDS 47636 47914 . + 0 ID=cds-WP_012664366.1;Parent=gene-CCO56_RS00270;Dbxref=GenBank:WP_012664366.1;Name=WP_012664366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=CCO56_RS00270;product=hypothetical protein;protein_id=WP_012664366.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 47981 48295 . - . ID=gene-CCO56_RS00275;Name=CCO56_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00275;old_locus_tag=CCO56_00275 NZ_NPMB01000001.1 Protein Homology CDS 47981 48295 . - 0 ID=cds-WP_072103250.1;Parent=gene-CCO56_RS00275;Dbxref=GenBank:WP_072103250.1;Name=WP_072103250.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=CCO56_RS00275;product=SymE family type I addiction module toxin;protein_id=WP_072103250.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 48387 48545 . + . ID=gene-CCO56_RS24025;Name=CCO56_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24025 NZ_NPMB01000001.1 Protein Homology CDS 48387 48545 . + 0 ID=cds-WP_024151530.1;Parent=gene-CCO56_RS24025;Dbxref=GenBank:WP_024151530.1;Name=WP_024151530.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=CCO56_RS24025;product=transposase;protein_id=WP_024151530.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 48479 49052 . + . ID=gene-CCO56_RS00280;Name=CCO56_RS00280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS00280;old_locus_tag=CCO56_00280;partial=true;pseudo=true;start_range=.,48479 NZ_NPMB01000001.1 Protein Homology CDS 48479 49052 . + 0 ID=cds-CCO56_RS00280;Parent=gene-CCO56_RS00280;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=CCO56_RS00280;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,48479;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 49813 50307 . + . ID=gene-CCO56_RS00285;Name=CCO56_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00285;old_locus_tag=CCO56_00285 NZ_NPMB01000001.1 Protein Homology CDS 49813 50307 . + 0 ID=cds-WP_061377699.1;Parent=gene-CCO56_RS00285;Dbxref=GenBank:WP_061377699.1;Name=WP_061377699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749863.1;locus_tag=CCO56_RS00285;product=pilus assembly protein;protein_id=WP_061377699.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 50391 51128 . + . ID=gene-CCO56_RS00290;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=CCO56_RS00290;old_locus_tag=CCO56_00290 NZ_NPMB01000001.1 Protein Homology CDS 50391 51128 . + 0 ID=cds-WP_001530955.1;Parent=gene-CCO56_RS00290;Dbxref=GenBank:WP_001530955.1;Name=WP_001530955.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=CCO56_RS00290;product=pili assembly chaperone SafB;protein_id=WP_001530955.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 51152 53662 . + . ID=gene-CCO56_RS00295;Name=CCO56_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00295;old_locus_tag=CCO56_00295 NZ_NPMB01000001.1 Protein Homology CDS 51152 53662 . + 0 ID=cds-WP_000669620.1;Parent=gene-CCO56_RS00295;Dbxref=GenBank:WP_000669620.1;Name=WP_000669620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=CCO56_RS00295;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000669620.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 53684 54154 . + . ID=gene-CCO56_RS00300;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=CCO56_RS00300;old_locus_tag=CCO56_00300 NZ_NPMB01000001.1 Protein Homology CDS 53684 54154 . + 0 ID=cds-WP_000266941.1;Parent=gene-CCO56_RS00300;Dbxref=GenBank:WP_000266941.1;Name=WP_000266941.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=CCO56_RS00300;product=AfaD family invasin;protein_id=WP_000266941.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 54561 55382 . + . ID=gene-CCO56_RS00305;Name=CCO56_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00305;old_locus_tag=CCO56_00305 NZ_NPMB01000001.1 Protein Homology CDS 54561 55382 . + 0 ID=cds-WP_000119391.1;Parent=gene-CCO56_RS00305;Dbxref=GenBank:WP_000119391.1;Name=WP_000119391.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=CCO56_RS00305;product=polysaccharide deacetylase family protein;protein_id=WP_000119391.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 55465 55702 . + . ID=gene-CCO56_RS00310;Name=CCO56_RS00310;end_range=55702,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS00310;old_locus_tag=CCO56_00310;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 55465 55702 . + 0 ID=cds-CCO56_RS00310;Parent=gene-CCO56_RS00310;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=55702,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=CCO56_RS00310;partial=true;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 56199 57146 . + . ID=gene-CCO56_RS00315;Name=CCO56_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00315;old_locus_tag=CCO56_00315 NZ_NPMB01000001.1 Protein Homology CDS 56199 57146 . + 0 ID=cds-WP_000970302.1;Parent=gene-CCO56_RS00315;Dbxref=GenBank:WP_000970302.1;Name=WP_000970302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=CCO56_RS00315;product=LysR family transcriptional regulator;protein_id=WP_000970302.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 57266 57385 . + . ID=gene-CCO56_RS00320;Name=CCO56_RS00320;end_range=57385,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS00320;old_locus_tag=CCO56_00320;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 57266 57385 . + 0 ID=cds-CCO56_RS00320;Parent=gene-CCO56_RS00320;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=57385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=CCO56_RS00320;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 57466 57627 . + . ID=gene-CCO56_RS00325;Name=CCO56_RS00325;end_range=57627,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS00325;old_locus_tag=CCO56_00325;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 57466 57627 . + 0 ID=cds-CCO56_RS00325;Parent=gene-CCO56_RS00325;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=57627,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=CCO56_RS00325;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 57692 58282 . - . ID=gene-CCO56_RS00330;Name=CCO56_RS00330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS00330;old_locus_tag=CCO56_00330;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 57692 58282 . - 0 ID=cds-CCO56_RS00330;Parent=gene-CCO56_RS00330;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013828.6;locus_tag=CCO56_RS00330;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 58241 58471 . + . ID=gene-CCO56_RS23615;Name=CCO56_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23615 NZ_NPMB01000001.1 GeneMarkS-2+ CDS 58241 58471 . + 0 ID=cds-WP_000564356.1;Parent=gene-CCO56_RS23615;Dbxref=GenBank:WP_000564356.1;Name=WP_000564356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS23615;product=hypothetical protein;protein_id=WP_000564356.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 59285 59995 . + . ID=gene-CCO56_RS00340;Name=tcfA;gbkey=Gene;gene=tcfA;gene_biotype=protein_coding;locus_tag=CCO56_RS00340;old_locus_tag=CCO56_00340 NZ_NPMB01000001.1 Protein Homology CDS 59285 59995 . + 0 ID=cds-WP_001009507.1;Parent=gene-CCO56_RS00340;Dbxref=GenBank:WP_001009507.1;Name=WP_001009507.1;gbkey=CDS;gene=tcfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009503.1;locus_tag=CCO56_RS00340;product=fimbrial chaperone TcfA;protein_id=WP_001009507.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 60046 60621 . + . ID=gene-CCO56_RS00345;Name=tcfB;gbkey=Gene;gene=tcfB;gene_biotype=protein_coding;locus_tag=CCO56_RS00345;old_locus_tag=CCO56_00345 NZ_NPMB01000001.1 Protein Homology CDS 60046 60621 . + 0 ID=cds-WP_000287812.1;Parent=gene-CCO56_RS00345;Dbxref=GenBank:WP_000287812.1;Name=WP_000287812.1;gbkey=CDS;gene=tcfB;inference=COORDINATES: protein motif:HMM:NF011837.0;locus_tag=CCO56_RS00345;product=fimbrial protein TcfB;protein_id=WP_000287812.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 60730 63417 . + . ID=gene-CCO56_RS00350;Name=tcfC;gbkey=Gene;gene=tcfC;gene_biotype=protein_coding;locus_tag=CCO56_RS00350;old_locus_tag=CCO56_00350 NZ_NPMB01000001.1 Protein Homology CDS 60730 63417 . + 0 ID=cds-WP_001632496.1;Parent=gene-CCO56_RS00350;Dbxref=GenBank:WP_001632496.1;Name=WP_001632496.1;gbkey=CDS;gene=tcfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092509.1;locus_tag=CCO56_RS00350;product=fimbrial outer membrane usher protein TcfC;protein_id=WP_001632496.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 63439 64488 . + . ID=gene-CCO56_RS00355;Name=tcfD;gbkey=Gene;gene=tcfD;gene_biotype=protein_coding;locus_tag=CCO56_RS00355;old_locus_tag=CCO56_00355 NZ_NPMB01000001.1 Protein Homology CDS 63439 64488 . + 0 ID=cds-WP_000791812.1;Parent=gene-CCO56_RS00355;Dbxref=GenBank:WP_000791812.1;Name=WP_000791812.1;gbkey=CDS;gene=tcfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000791812.1;locus_tag=CCO56_RS00355;product=fimbrial protein TcfD;protein_id=WP_000791812.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 64621 65076 . + . ID=gene-CCO56_RS00360;Name=tinR;gbkey=Gene;gene=tinR;gene_biotype=protein_coding;locus_tag=CCO56_RS00360;old_locus_tag=CCO56_00360 NZ_NPMB01000001.1 Protein Homology CDS 64621 65076 . + 0 ID=cds-WP_000141547.1;Parent=gene-CCO56_RS00360;Dbxref=GenBank:WP_000141547.1;Name=WP_000141547.1;gbkey=CDS;gene=tinR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219490.1;locus_tag=CCO56_RS00360;product=Lrp/AsnC family transcriptional regulator TinR;protein_id=WP_000141547.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 65216 65833 . + . ID=gene-CCO56_RS00365;Name=tioA;gbkey=Gene;gene=tioA;gene_biotype=protein_coding;locus_tag=CCO56_RS00365;old_locus_tag=CCO56_00365 NZ_NPMB01000001.1 Protein Homology CDS 65216 65833 . + 0 ID=cds-WP_000241751.1;Parent=gene-CCO56_RS00365;Dbxref=GenBank:WP_000241751.1;Name=WP_000241751.1;gbkey=CDS;gene=tioA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241754.1;locus_tag=CCO56_RS00365;product=protein TioA;protein_id=WP_000241751.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 66436 66548 . - . ID=gene-CCO56_RS23510;Name=CCO56_RS23510;end_range=66548,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23510;partial=true;pseudo=true;start_range=.,66436 NZ_NPMB01000001.1 Protein Homology CDS 66436 66548 . - 0 ID=cds-CCO56_RS23510;Parent=gene-CCO56_RS23510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=66548,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=CCO56_RS23510;partial=true;product=hypothetical protein;pseudo=true;start_range=.,66436;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 66605 66793 . + . ID=gene-CCO56_RS00375;Name=CCO56_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00375;old_locus_tag=CCO56_00375 NZ_NPMB01000001.1 Protein Homology CDS 66605 66793 . + 0 ID=cds-WP_031603244.1;Parent=gene-CCO56_RS00375;Dbxref=GenBank:WP_031603244.1;Name=WP_031603244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543323.1;locus_tag=CCO56_RS00375;product=hypothetical protein;protein_id=WP_031603244.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 66797 67516 . - . ID=gene-CCO56_RS00380;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=CCO56_RS00380;old_locus_tag=CCO56_00380 NZ_NPMB01000001.1 Protein Homology CDS 66797 67516 . - 0 ID=cds-WP_000787605.1;Parent=gene-CCO56_RS00380;Dbxref=GenBank:WP_000787605.1;Name=WP_000787605.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=CCO56_RS00380;product=adhesin/invasin protein PagN;protein_id=WP_000787605.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 67840 68247 . - . ID=gene-CCO56_RS00390;Name=CCO56_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00390;old_locus_tag=CCO56_00390 NZ_NPMB01000001.1 Protein Homology CDS 67840 68247 . - 0 ID=cds-WP_080177287.1;Parent=gene-CCO56_RS00390;Dbxref=GenBank:WP_080177287.1;Name=WP_080177287.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=CCO56_RS00390;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_080177287.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 68557 69324 . - . ID=gene-CCO56_RS00400;Name=CCO56_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00400;old_locus_tag=CCO56_00400 NZ_NPMB01000001.1 Protein Homology CDS 68557 69324 . - 0 ID=cds-WP_000015789.1;Parent=gene-CCO56_RS00400;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=CCO56_RS00400;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 69433 71877 . - . ID=gene-CCO56_RS00405;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CCO56_RS00405;old_locus_tag=CCO56_00405 NZ_NPMB01000001.1 Protein Homology CDS 69433 71877 . - 0 ID=cds-WP_000973034.1;Parent=gene-CCO56_RS00405;Dbxref=GenBank:WP_000973034.1;Name=WP_000973034.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=CCO56_RS00405;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973034.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 72116 72694 . + . ID=gene-CCO56_RS00410;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=CCO56_RS00410;old_locus_tag=CCO56_00410 NZ_NPMB01000001.1 Protein Homology CDS 72116 72694 . + 0 ID=cds-WP_000284051.1;Parent=gene-CCO56_RS00410;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=CCO56_RS00410;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 72907 73674 . + . ID=gene-CCO56_RS00415;Name=CCO56_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00415;old_locus_tag=CCO56_00415 NZ_NPMB01000001.1 Protein Homology CDS 72907 73674 . + 0 ID=cds-WP_000333387.1;Parent=gene-CCO56_RS00415;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=CCO56_RS00415;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 73645 74385 . - . ID=gene-CCO56_RS00420;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=CCO56_RS00420;old_locus_tag=CCO56_00420 NZ_NPMB01000001.1 Protein Homology CDS 73645 74385 . - 0 ID=cds-WP_001225658.1;Parent=gene-CCO56_RS00420;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=CCO56_RS00420;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 74635 75690 . + . ID=gene-CCO56_RS00425;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CCO56_RS00425;old_locus_tag=CCO56_00425 NZ_NPMB01000001.1 Protein Homology CDS 74635 75690 . + 0 ID=cds-WP_001226198.1;Parent=gene-CCO56_RS00425;Dbxref=GenBank:WP_001226198.1;Name=WP_001226198.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=CCO56_RS00425;product=DNA polymerase IV;protein_id=WP_001226198.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 75909 77048 . + . ID=gene-CCO56_RS00430;Name=CCO56_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00430;old_locus_tag=CCO56_00430 NZ_NPMB01000001.1 Protein Homology CDS 75909 77048 . + 0 ID=cds-WP_000528888.1;Parent=gene-CCO56_RS00430;Dbxref=GenBank:WP_000528888.1;Name=WP_000528888.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=CCO56_RS00430;product=RNA ligase RtcB family protein;protein_id=WP_000528888.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 77045 77659 . + . ID=gene-CCO56_RS00435;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=CCO56_RS00435;old_locus_tag=CCO56_00435 NZ_NPMB01000001.1 Protein Homology CDS 77045 77659 . + 0 ID=cds-WP_000602090.1;Parent=gene-CCO56_RS00435;Dbxref=GenBank:WP_000602090.1;Name=WP_000602090.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=CCO56_RS00435;product=peptide chain release factor H;protein_id=WP_000602090.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 77815 79272 . - . ID=gene-CCO56_RS00440;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=CCO56_RS00440;old_locus_tag=CCO56_00440 NZ_NPMB01000001.1 Protein Homology CDS 77815 79272 . - 0 ID=cds-WP_001292972.1;Parent=gene-CCO56_RS00440;Dbxref=GenBank:WP_001292972.1;Name=WP_001292972.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=CCO56_RS00440;product=cytosol nonspecific dipeptidase;protein_id=WP_001292972.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 79521 79979 . + . ID=gene-CCO56_RS00445;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=CCO56_RS00445;old_locus_tag=CCO56_00445 NZ_NPMB01000001.1 Protein Homology CDS 79521 79979 . + 0 ID=cds-WP_001292018.1;Parent=gene-CCO56_RS00445;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=CCO56_RS00445;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 80068 81312 . + . ID=gene-CCO56_RS00450;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=CCO56_RS00450;old_locus_tag=CCO56_00450 NZ_NPMB01000001.1 Protein Homology CDS 80068 81312 . + 0 ID=cds-WP_000189586.1;Parent=gene-CCO56_RS00450;Dbxref=GenBank:WP_000189586.1;Name=WP_000189586.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=CCO56_RS00450;product=esterase FrsA;protein_id=WP_000189586.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 81370 81771 . + . ID=gene-CCO56_RS00455;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=CCO56_RS00455;old_locus_tag=CCO56_00455 NZ_NPMB01000001.1 Protein Homology CDS 81370 81771 . + 0 ID=cds-WP_000174695.1;Parent=gene-CCO56_RS00455;Dbxref=GenBank:WP_000174695.1;Name=WP_000174695.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=CCO56_RS00455;product=sigma factor-binding protein Crl;protein_id=WP_000174695.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 81822 82874 . - . ID=gene-CCO56_RS00460;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=CCO56_RS00460;old_locus_tag=CCO56_00460 NZ_NPMB01000001.1 Protein Homology CDS 81822 82874 . - 0 ID=cds-WP_001043667.1;Parent=gene-CCO56_RS00460;Dbxref=GenBank:WP_001043667.1;Name=WP_001043667.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=CCO56_RS00460;product=phosphoporin PhoE;protein_id=WP_001043667.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 83157 84260 . + . ID=gene-CCO56_RS00465;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=CCO56_RS00465;old_locus_tag=CCO56_00465 NZ_NPMB01000001.1 Protein Homology CDS 83157 84260 . + 0 ID=cds-WP_001285275.1;Parent=gene-CCO56_RS00465;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=CCO56_RS00465;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 84272 85522 . + . ID=gene-CCO56_RS00470;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=CCO56_RS00470;old_locus_tag=CCO56_00470 NZ_NPMB01000001.1 Protein Homology CDS 84272 85522 . + 0 ID=cds-WP_000893218.1;Parent=gene-CCO56_RS00470;Dbxref=GenBank:WP_000893218.1;Name=WP_000893218.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=CCO56_RS00470;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893218.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 85638 85713 . + . ID=gene-CCO56_RS00475;Name=CCO56_RS00475;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS00475;old_locus_tag=CCO56_00475 NZ_NPMB01000001.1 tRNAscan-SE tRNA 85638 85713 . + . ID=rna-CCO56_RS00475;Parent=gene-CCO56_RS00475;anticodon=(pos:85671..85673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS00475;product=tRNA-Thr NZ_NPMB01000001.1 tRNAscan-SE exon 85638 85713 . + . ID=exon-CCO56_RS00475-1;Parent=rna-CCO56_RS00475;anticodon=(pos:85671..85673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS00475;product=tRNA-Thr NZ_NPMB01000001.1 RefSeq pseudogene 85727 86506 . - . ID=gene-CCO56_RS00480;Name=CCO56_RS00480;end_range=86506,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS00480;old_locus_tag=CCO56_00480;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 85727 86506 . - 0 ID=cds-CCO56_RS00480;Parent=gene-CCO56_RS00480;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=86506,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706266.1;locus_tag=CCO56_RS00480;partial=true;product=site-specific integrase;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 86539 88005 . - . ID=gene-CCO56_RS00485;Name=CCO56_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00485;old_locus_tag=CCO56_00485 NZ_NPMB01000001.1 Protein Homology CDS 86539 88005 . - 0 ID=cds-WP_080176986.1;Parent=gene-CCO56_RS00485;Dbxref=GenBank:WP_080176986.1;Name=WP_080176986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174193.1;locus_tag=CCO56_RS00485;product=hypothetical protein;protein_id=WP_080176986.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 88009 88923 . - . ID=gene-CCO56_RS00490;Name=CCO56_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00490;old_locus_tag=CCO56_00490 NZ_NPMB01000001.1 Protein Homology CDS 88009 88923 . - 0 ID=cds-WP_094882024.1;Parent=gene-CCO56_RS00490;Dbxref=GenBank:WP_094882024.1;Name=WP_094882024.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=CCO56_RS00490;product=glycosyltransferase family 2 protein;protein_id=WP_094882024.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 88920 89282 . - . ID=gene-CCO56_RS00495;Name=CCO56_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00495;old_locus_tag=CCO56_00495 NZ_NPMB01000001.1 Protein Homology CDS 88920 89282 . - 0 ID=cds-WP_080086402.1;Parent=gene-CCO56_RS00495;Dbxref=GenBank:WP_080086402.1;Name=WP_080086402.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=CCO56_RS00495;product=GtrA family protein;protein_id=WP_080086402.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 89750 89971 . + . ID=gene-CCO56_RS00505;Name=CCO56_RS00505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS00505;old_locus_tag=CCO56_00505;partial=true;pseudo=true;start_range=.,89750 NZ_NPMB01000001.1 Protein Homology CDS 89750 89971 . + 0 ID=cds-CCO56_RS00505;Parent=gene-CCO56_RS00505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=CCO56_RS00505;partial=true;product=hypothetical protein;pseudo=true;start_range=.,89750;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 90019 90777 . - . ID=gene-CCO56_RS00510;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=CCO56_RS00510;old_locus_tag=CCO56_00510 NZ_NPMB01000001.1 Protein Homology CDS 90019 90777 . - 0 ID=cds-WP_001247021.1;Parent=gene-CCO56_RS00510;Dbxref=GenBank:WP_001247021.1;Name=WP_001247021.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=CCO56_RS00510;product=fimbrial biogenesis chaperone StbE;protein_id=WP_001247021.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 90743 92068 . - . ID=gene-CCO56_RS00515;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=CCO56_RS00515;old_locus_tag=CCO56_00515 NZ_NPMB01000001.1 Protein Homology CDS 90743 92068 . - 0 ID=cds-WP_000899094.1;Parent=gene-CCO56_RS00515;Dbxref=GenBank:WP_000899094.1;Name=WP_000899094.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO56_RS00515;product=fimbrial usher protein StbD;protein_id=WP_000899094.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 92073 94634 . - . ID=gene-CCO56_RS00520;Name=CCO56_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00520;old_locus_tag=CCO56_00520 NZ_NPMB01000001.1 Protein Homology CDS 92073 94634 . - 0 ID=cds-WP_079841464.1;Parent=gene-CCO56_RS00520;Dbxref=GenBank:WP_079841464.1;Name=WP_079841464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=CCO56_RS00520;product=fimbrial outer membrane usher protein;protein_id=WP_079841464.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 94618 95379 . - . ID=gene-CCO56_RS00525;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=CCO56_RS00525;old_locus_tag=CCO56_00525 NZ_NPMB01000001.1 Protein Homology CDS 94618 95379 . - 0 ID=cds-WP_000781492.1;Parent=gene-CCO56_RS00525;Dbxref=GenBank:WP_000781492.1;Name=WP_000781492.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=CCO56_RS00525;product=fimbrial biogenesis chaperone StbB;protein_id=WP_000781492.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 95441 95977 . - . ID=gene-CCO56_RS00530;Name=CCO56_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00530;old_locus_tag=CCO56_00530 NZ_NPMB01000001.1 Protein Homology CDS 95441 95977 . - 0 ID=cds-WP_000062033.1;Parent=gene-CCO56_RS00530;Dbxref=GenBank:WP_000062033.1;Name=WP_000062033.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=CCO56_RS00530;product=fimbrial protein;protein_id=WP_000062033.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 96641 97375 . + . ID=gene-CCO56_RS00540;Name=CCO56_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00540;old_locus_tag=CCO56_00540 NZ_NPMB01000001.1 Protein Homology CDS 96641 97375 . + 0 ID=cds-WP_001005860.1;Parent=gene-CCO56_RS00540;Dbxref=GenBank:WP_001005860.1;Name=WP_001005860.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=CCO56_RS00540;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001005860.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 97348 97648 . + . ID=gene-CCO56_RS00545;Name=CCO56_RS00545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS00545;old_locus_tag=CCO56_00545;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 97348 97648 . + 0 ID=cds-CCO56_RS00545;Parent=gene-CCO56_RS00545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=CCO56_RS00545;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 98161 99735 . + . ID=gene-CCO56_RS00555;Name=CCO56_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00555;old_locus_tag=CCO56_00555 NZ_NPMB01000001.1 Protein Homology CDS 98161 99735 . + 0 ID=cds-WP_080177229.1;Parent=gene-CCO56_RS00555;Dbxref=GenBank:WP_080177229.1;Name=WP_080177229.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=CCO56_RS00555;product=EAL domain-containing protein;protein_id=WP_080177229.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 99834 100577 . + . ID=gene-CCO56_RS00560;Name=CCO56_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00560;old_locus_tag=CCO56_00560 NZ_NPMB01000001.1 Protein Homology CDS 99834 100577 . + 0 ID=cds-WP_023233109.1;Parent=gene-CCO56_RS00560;Dbxref=GenBank:WP_023233109.1;Name=WP_023233109.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=CCO56_RS00560;product=transcriptional regulator;protein_id=WP_023233109.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 100550 101038 . + . ID=gene-CCO56_RS00565;Name=CCO56_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00565;old_locus_tag=CCO56_00565 NZ_NPMB01000001.1 Protein Homology CDS 100550 101038 . + 0 ID=cds-WP_080177228.1;Parent=gene-CCO56_RS00565;Dbxref=GenBank:WP_080177228.1;Name=WP_080177228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=CCO56_RS00565;product=hypothetical protein;protein_id=WP_080177228.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 101440 101964 . + . ID=gene-CCO56_RS00570;Name=CCO56_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00570;old_locus_tag=CCO56_00570 NZ_NPMB01000001.1 Protein Homology CDS 101440 101964 . + 0 ID=cds-WP_000830237.1;Parent=gene-CCO56_RS00570;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=CCO56_RS00570;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 102108 102749 . + . ID=gene-CCO56_RS00575;Name=CCO56_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00575;old_locus_tag=CCO56_00575 NZ_NPMB01000001.1 Protein Homology CDS 102108 102749 . + 0 ID=cds-WP_001539248.1;Parent=gene-CCO56_RS00575;Dbxref=GenBank:WP_001539248.1;Name=WP_001539248.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=CCO56_RS00575;product=helix-turn-helix transcriptional regulator;protein_id=WP_001539248.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 102760 102984 . + . ID=gene-CCO56_RS00580;Name=CCO56_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00580;old_locus_tag=CCO56_00580 NZ_NPMB01000001.1 Protein Homology CDS 102760 102984 . + 0 ID=cds-WP_080177227.1;Parent=gene-CCO56_RS00580;Dbxref=GenBank:WP_080177227.1;Name=WP_080177227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=CCO56_RS00580;product=hypothetical protein;protein_id=WP_080177227.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 103042 103401 . + . ID=gene-CCO56_RS00585;Name=CCO56_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00585;old_locus_tag=CCO56_00585 NZ_NPMB01000001.1 Protein Homology CDS 103042 103401 . + 0 ID=cds-WP_000722978.1;Parent=gene-CCO56_RS00585;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=CCO56_RS00585;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 103469 104926 . - . ID=gene-CCO56_RS00590;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=CCO56_RS00590;old_locus_tag=CCO56_00590 NZ_NPMB01000001.1 Protein Homology CDS 103469 104926 . - 0 ID=cds-WP_023233108.1;Parent=gene-CCO56_RS00590;Dbxref=GenBank:WP_023233108.1;Name=WP_023233108.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=CCO56_RS00590;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_023233108.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 104943 108110 . - . ID=gene-CCO56_RS00595;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=CCO56_RS00595;old_locus_tag=CCO56_00595 NZ_NPMB01000001.1 Protein Homology CDS 104943 108110 . - 0 ID=cds-WP_000673153.1;Parent=gene-CCO56_RS00595;Dbxref=GenBank:WP_000673153.1;Name=WP_000673153.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=CCO56_RS00595;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_000673153.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 108107 109333 . - . ID=gene-CCO56_RS00600;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=CCO56_RS00600;old_locus_tag=CCO56_00600 NZ_NPMB01000001.1 Protein Homology CDS 108107 109333 . - 0 ID=cds-WP_080177226.1;Parent=gene-CCO56_RS00600;Dbxref=GenBank:WP_080177226.1;Name=WP_080177226.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=CCO56_RS00600;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_080177226.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 109610 111898 . + . ID=gene-CCO56_RS00605;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=CCO56_RS00605;old_locus_tag=CCO56_00605 NZ_NPMB01000001.1 Protein Homology CDS 109610 111898 . + 0 ID=cds-WP_094882025.1;Parent=gene-CCO56_RS00605;Dbxref=GenBank:WP_094882025.1;Name=WP_094882025.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=CCO56_RS00605;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_094882025.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 111910 112374 . + . ID=gene-CCO56_RS00610;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=CCO56_RS00610;old_locus_tag=CCO56_00610 NZ_NPMB01000001.1 Protein Homology CDS 111910 112374 . + 0 ID=cds-WP_001020583.1;Parent=gene-CCO56_RS00610;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=CCO56_RS00610;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 112452 112646 . + . ID=gene-CCO56_RS00615;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=CCO56_RS00615;old_locus_tag=CCO56_00615 NZ_NPMB01000001.1 Protein Homology CDS 112452 112646 . + 0 ID=cds-WP_001159470.1;Parent=gene-CCO56_RS00615;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=CCO56_RS00615;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 112938 114191 . + . ID=gene-CCO56_RS00620;Name=CCO56_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00620;old_locus_tag=CCO56_00620 NZ_NPMB01000001.1 Protein Homology CDS 112938 114191 . + 0 ID=cds-WP_000288504.1;Parent=gene-CCO56_RS00620;Dbxref=GenBank:WP_000288504.1;Name=WP_000288504.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=CCO56_RS00620;product=MFS transporter;protein_id=WP_000288504.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 114380 116338 . + . ID=gene-CCO56_RS00625;Name=CCO56_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00625;old_locus_tag=CCO56_00625 NZ_NPMB01000001.1 Protein Homology CDS 114380 116338 . + 0 ID=cds-WP_080177225.1;Parent=gene-CCO56_RS00625;Dbxref=GenBank:WP_080177225.1;Name=WP_080177225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=CCO56_RS00625;product=site-specific DNA-methyltransferase;protein_id=WP_080177225.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 116348 119320 . + . ID=gene-CCO56_RS00630;Name=CCO56_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00630;old_locus_tag=CCO56_00630 NZ_NPMB01000001.1 Protein Homology CDS 116348 119320 . + 0 ID=cds-WP_077905978.1;Parent=gene-CCO56_RS00630;Dbxref=GenBank:WP_077905978.1;Name=WP_077905978.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=CCO56_RS00630;product=type III restriction-modification system endonuclease;protein_id=WP_077905978.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 119597 119698 . + . ID=gene-CCO56_RS00635;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=CCO56_RS00635;old_locus_tag=CCO56_00635 NZ_NPMB01000001.1 Protein Homology CDS 119597 119698 . + 0 ID=cds-WP_080177224.1;Parent=gene-CCO56_RS00635;Dbxref=GenBank:WP_080177224.1;Name=WP_080177224.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=CCO56_RS00635;product=small effector SsaA;protein_id=WP_080177224.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 119815 121218 . + . ID=gene-CCO56_RS00640;Name=CCO56_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00640;old_locus_tag=CCO56_00640 NZ_NPMB01000001.1 Protein Homology CDS 119815 121218 . + 0 ID=cds-WP_000393715.1;Parent=gene-CCO56_RS00640;Dbxref=GenBank:WP_000393715.1;Name=WP_000393715.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=CCO56_RS00640;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393715.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 121215 122225 . + . ID=gene-CCO56_RS00645;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO56_RS00645;old_locus_tag=CCO56_00645 NZ_NPMB01000001.1 Protein Homology CDS 121215 122225 . + 0 ID=cds-WP_000151047.1;Parent=gene-CCO56_RS00645;Dbxref=GenBank:WP_000151047.1;Name=WP_000151047.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=CCO56_RS00645;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151047.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 122171 122356 . + . ID=gene-CCO56_RS00650;Name=CCO56_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00650;old_locus_tag=CCO56_00650 NZ_NPMB01000001.1 Protein Homology CDS 122171 122356 . + 0 ID=cds-WP_305954967.1;Parent=gene-CCO56_RS00650;Dbxref=GenBank:WP_305954967.1;Name=WP_305954967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=CCO56_RS00650;product=DUF2474 domain-containing protein;protein_id=WP_305954967.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 122275 122467 . + . ID=gene-CCO56_RS23990;Name=CCO56_RS23990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23990;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 122275 122467 . + 0 ID=cds-CCO56_RS23990;Parent=gene-CCO56_RS23990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=CCO56_RS23990;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 122563 123567 . + . ID=gene-CCO56_RS00655;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=CCO56_RS00655;old_locus_tag=CCO56_00655 NZ_NPMB01000001.1 Protein Homology CDS 122563 123567 . + 0 ID=cds-WP_000074602.1;Parent=gene-CCO56_RS00655;Dbxref=GenBank:WP_000074602.1;Name=WP_000074602.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=CCO56_RS00655;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074602.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 123713 125821 . + . ID=gene-CCO56_RS00660;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=CCO56_RS00660;old_locus_tag=CCO56_00660 NZ_NPMB01000001.1 Protein Homology CDS 123713 125821 . + 0 ID=cds-WP_111771952.1;Parent=gene-CCO56_RS00660;Dbxref=GenBank:WP_111771952.1;Name=WP_111771952.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=CCO56_RS00660;product=ferrioxamine B receptor FoxA;protein_id=WP_111771952.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 125862 126494 . - . ID=gene-CCO56_RS00665;Name=CCO56_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00665;old_locus_tag=CCO56_00665 NZ_NPMB01000001.1 Protein Homology CDS 125862 126494 . - 0 ID=cds-WP_000433131.1;Parent=gene-CCO56_RS00665;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=CCO56_RS00665;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 126726 127001 . + . ID=gene-CCO56_RS00670;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=CCO56_RS00670;old_locus_tag=CCO56_00670 NZ_NPMB01000001.1 Protein Homology CDS 126726 127001 . + 0 ID=cds-WP_000848026.1;Parent=gene-CCO56_RS00670;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=CCO56_RS00670;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 127137 128762 . - . ID=gene-CCO56_RS00675;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=CCO56_RS00675;old_locus_tag=CCO56_00675 NZ_NPMB01000001.1 Protein Homology CDS 127137 128762 . - 0 ID=cds-WP_079982241.1;Parent=gene-CCO56_RS00675;Dbxref=GenBank:WP_079982241.1;Name=WP_079982241.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=CCO56_RS00675;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_079982241.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 129028 129915 . + . ID=gene-CCO56_RS00680;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=CCO56_RS00680;old_locus_tag=CCO56_00680 NZ_NPMB01000001.1 Protein Homology CDS 129028 129915 . + 0 ID=cds-WP_000052223.1;Parent=gene-CCO56_RS00680;Dbxref=GenBank:WP_000052223.1;Name=WP_000052223.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=CCO56_RS00680;product=methylisocitrate lyase;protein_id=WP_000052223.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 130026 131195 . + . ID=gene-CCO56_RS00685;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=CCO56_RS00685;old_locus_tag=CCO56_00685 NZ_NPMB01000001.1 Protein Homology CDS 130026 131195 . + 0 ID=cds-WP_001285877.1;Parent=gene-CCO56_RS00685;Dbxref=GenBank:WP_001285877.1;Name=WP_001285877.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=CCO56_RS00685;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285877.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 131235 132686 . + . ID=gene-CCO56_RS00690;Name=CCO56_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00690;old_locus_tag=CCO56_00690 NZ_NPMB01000001.1 Protein Homology CDS 131235 132686 . + 0 ID=cds-WP_000107074.1;Parent=gene-CCO56_RS00690;Dbxref=GenBank:WP_000107074.1;Name=WP_000107074.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=CCO56_RS00690;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_000107074.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 132727 134613 . + . ID=gene-CCO56_RS00695;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=CCO56_RS00695;old_locus_tag=CCO56_00695 NZ_NPMB01000001.1 Protein Homology CDS 132727 134613 . + 0 ID=cds-WP_000010222.1;Parent=gene-CCO56_RS00695;Dbxref=GenBank:WP_000010222.1;Name=WP_000010222.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=CCO56_RS00695;product=propionate--CoA ligase;protein_id=WP_000010222.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 134720 135694 . - . ID=gene-CCO56_RS00700;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CCO56_RS00700;old_locus_tag=CCO56_00700 NZ_NPMB01000001.1 Protein Homology CDS 134720 135694 . - 0 ID=cds-WP_000130724.1;Parent=gene-CCO56_RS00700;Dbxref=GenBank:WP_000130724.1;Name=WP_000130724.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=CCO56_RS00700;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 136207 139152 . + . ID=gene-CCO56_RS00705;Name=CCO56_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00705;old_locus_tag=CCO56_00705 NZ_NPMB01000001.1 Protein Homology CDS 136207 139152 . + 0 ID=cds-WP_023212887.1;Parent=gene-CCO56_RS00705;Dbxref=GenBank:WP_023212887.1;Name=WP_023212887.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=CCO56_RS00705;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_023212887.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 139238 139861 . + . ID=gene-CCO56_RS00710;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=CCO56_RS00710;old_locus_tag=CCO56_00710 NZ_NPMB01000001.1 Protein Homology CDS 139238 139861 . + 0 ID=cds-WP_001632568.1;Parent=gene-CCO56_RS00710;Dbxref=GenBank:WP_001632568.1;Name=WP_001632568.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=CCO56_RS00710;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_001632568.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 139906 141063 . - . ID=gene-CCO56_RS00715;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=CCO56_RS00715;old_locus_tag=CCO56_00715 NZ_NPMB01000001.1 Protein Homology CDS 139906 141063 . - 0 ID=cds-WP_000830780.1;Parent=gene-CCO56_RS00715;Dbxref=GenBank:WP_000830780.1;Name=WP_000830780.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=CCO56_RS00715;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830780.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 141410 142630 . + . ID=gene-CCO56_RS00725;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=CCO56_RS00725;old_locus_tag=CCO56_00725 NZ_NPMB01000001.1 Protein Homology CDS 141410 142630 . + 0 ID=cds-WP_000477024.1;Parent=gene-CCO56_RS00725;Dbxref=GenBank:WP_000477024.1;Name=WP_000477024.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=CCO56_RS00725;product=peptide antibiotic transporter SbmA;protein_id=WP_000477024.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 142645 143739 . + . ID=gene-CCO56_RS00730;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=CCO56_RS00730;old_locus_tag=CCO56_00730 NZ_NPMB01000001.1 Protein Homology CDS 142645 143739 . + 0 ID=cds-WP_001271422.1;Parent=gene-CCO56_RS00730;Dbxref=GenBank:WP_001271422.1;Name=WP_001271422.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=CCO56_RS00730;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271422.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 143777 144085 . - . ID=gene-CCO56_RS00735;Name=CCO56_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00735;old_locus_tag=CCO56_00735 NZ_NPMB01000001.1 Protein Homology CDS 143777 144085 . - 0 ID=cds-WP_000763139.1;Parent=gene-CCO56_RS00735;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=CCO56_RS00735;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 144353 144568 . + . ID=gene-CCO56_RS00740;Name=CCO56_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00740;old_locus_tag=CCO56_00740 NZ_NPMB01000001.1 Protein Homology CDS 144353 144568 . + 0 ID=cds-WP_001239240.1;Parent=gene-CCO56_RS00740;Dbxref=GenBank:WP_001239240.1;Name=WP_001239240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=CCO56_RS00740;product=DUF2754 family protein;protein_id=WP_001239240.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 144594 145688 . - . ID=gene-CCO56_RS00745;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=CCO56_RS00745;old_locus_tag=CCO56_00745 NZ_NPMB01000001.1 Protein Homology CDS 144594 145688 . - 0 ID=cds-WP_001096588.1;Parent=gene-CCO56_RS00745;Dbxref=GenBank:WP_001096588.1;Name=WP_001096588.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=CCO56_RS00745;product=D-alanine--D-alanine ligase;protein_id=WP_001096588.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 145766 146479 . + . ID=gene-CCO56_RS00750;Name=CCO56_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00750;old_locus_tag=CCO56_00750 NZ_NPMB01000001.1 Protein Homology CDS 145766 146479 . + 0 ID=cds-WP_000480786.1;Parent=gene-CCO56_RS00750;Dbxref=GenBank:WP_000480786.1;Name=WP_000480786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=CCO56_RS00750;product=extensin family protein;protein_id=WP_000480786.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 146648 147859 . + . ID=gene-CCO56_RS00755;Name=CCO56_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00755;old_locus_tag=CCO56_00755 NZ_NPMB01000001.1 Protein Homology CDS 146648 147859 . + 0 ID=cds-WP_000446772.1;Parent=gene-CCO56_RS00755;Dbxref=GenBank:WP_000446772.1;Name=WP_000446772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=CCO56_RS00755;product=multidrug efflux MFS transporter;protein_id=WP_000446772.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 148156 148416 . + . ID=gene-CCO56_RS00760;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=CCO56_RS00760;old_locus_tag=CCO56_00760 NZ_NPMB01000001.1 Protein Homology CDS 148156 148416 . + 0 ID=cds-WP_001518423.1;Parent=gene-CCO56_RS00760;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=CCO56_RS00760;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 148769 149089 . + . ID=gene-CCO56_RS00770;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=CCO56_RS00770;old_locus_tag=CCO56_00770 NZ_NPMB01000001.1 Protein Homology CDS 148769 149089 . + 0 ID=cds-WP_000705165.1;Parent=gene-CCO56_RS00770;Dbxref=GenBank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=CCO56_RS00770;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 149181 150293 . + . ID=gene-CCO56_RS00775;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=CCO56_RS00775;old_locus_tag=CCO56_00775 NZ_NPMB01000001.1 Protein Homology CDS 149181 150293 . + 0 ID=cds-WP_000484094.1;Parent=gene-CCO56_RS00775;Dbxref=GenBank:WP_000484094.1;Name=WP_000484094.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=CCO56_RS00775;product=diguanylate cyclase AdrA;protein_id=WP_000484094.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 150308 151117 . - . ID=gene-CCO56_RS00780;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CCO56_RS00780;old_locus_tag=CCO56_00780 NZ_NPMB01000001.1 Protein Homology CDS 150308 151117 . - 0 ID=cds-WP_000412193.1;Parent=gene-CCO56_RS00780;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=CCO56_RS00780;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 151257 151712 . + . ID=gene-CCO56_RS00785;Name=CCO56_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00785;old_locus_tag=CCO56_00785 NZ_NPMB01000001.1 Protein Homology CDS 151257 151712 . + 0 ID=cds-WP_000158137.1;Parent=gene-CCO56_RS00785;Dbxref=GenBank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=CCO56_RS00785;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 151897 152442 . + . ID=gene-CCO56_RS00790;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=CCO56_RS00790;old_locus_tag=CCO56_00790 NZ_NPMB01000001.1 Protein Homology CDS 151897 152442 . + 0 ID=cds-WP_000983570.1;Parent=gene-CCO56_RS00790;Dbxref=GenBank:WP_000983570.1;Name=WP_000983570.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=CCO56_RS00790;product=shikimate kinase AroL;protein_id=WP_000983570.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 152469 152660 . + . ID=gene-CCO56_RS00795;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=CCO56_RS00795;old_locus_tag=CCO56_00795 NZ_NPMB01000001.1 Protein Homology CDS 152469 152660 . + 0 ID=cds-WP_001143161.1;Parent=gene-CCO56_RS00795;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=CCO56_RS00795;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 152911 153588 . + . ID=gene-CCO56_RS00800;Name=CCO56_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00800;old_locus_tag=CCO56_00800 NZ_NPMB01000001.1 Protein Homology CDS 152911 153588 . + 0 ID=cds-WP_001276437.1;Parent=gene-CCO56_RS00800;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=CCO56_RS00800;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 153659 153943 . + . ID=gene-CCO56_RS00805;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=CCO56_RS00805;old_locus_tag=CCO56_00805 NZ_NPMB01000001.1 Protein Homology CDS 153659 153943 . + 0 ID=cds-WP_000941953.1;Parent=gene-CCO56_RS00805;Dbxref=GenBank:WP_000941953.1;Name=WP_000941953.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=CCO56_RS00805;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941953.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 153981 154892 . - . ID=gene-CCO56_RS00810;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=CCO56_RS00810;old_locus_tag=CCO56_00810 NZ_NPMB01000001.1 Protein Homology CDS 153981 154892 . - 0 ID=cds-WP_000964305.1;Parent=gene-CCO56_RS00810;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=CCO56_RS00810;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 155018 155926 . + . ID=gene-CCO56_RS00815;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=CCO56_RS00815;old_locus_tag=CCO56_00815 NZ_NPMB01000001.1 Protein Homology CDS 155018 155926 . + 0 ID=cds-WP_001527114.1;Parent=gene-CCO56_RS00815;Dbxref=GenBank:WP_001527114.1;Name=WP_001527114.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=CCO56_RS00815;product=fructokinase;protein_id=WP_001527114.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 155946 157118 . - . ID=gene-CCO56_RS00820;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=CCO56_RS00820;old_locus_tag=CCO56_00820 NZ_NPMB01000001.1 Protein Homology CDS 155946 157118 . - 0 ID=cds-WP_023212890.1;Parent=gene-CCO56_RS00820;Dbxref=GenBank:WP_023212890.1;Name=WP_023212890.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=CCO56_RS00820;product=MFS transporter AraJ;protein_id=WP_023212890.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 157290 160430 . - . ID=gene-CCO56_RS00825;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CCO56_RS00825;old_locus_tag=CCO56_00825 NZ_NPMB01000001.1 Protein Homology CDS 157290 160430 . - 0 ID=cds-WP_023212891.1;Parent=gene-CCO56_RS00825;Dbxref=GenBank:WP_023212891.1;Name=WP_023212891.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=CCO56_RS00825;product=exonuclease subunit SbcC;protein_id=WP_023212891.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 160427 161629 . - . ID=gene-CCO56_RS00830;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CCO56_RS00830;old_locus_tag=CCO56_00830 NZ_NPMB01000001.1 Protein Homology CDS 160427 161629 . - 0 ID=cds-WP_001221248.1;Parent=gene-CCO56_RS00830;Dbxref=GenBank:WP_001221248.1;Name=WP_001221248.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=CCO56_RS00830;product=exonuclease subunit SbcD;protein_id=WP_001221248.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 161844 162533 . + . ID=gene-CCO56_RS00835;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=CCO56_RS00835;old_locus_tag=CCO56_00835 NZ_NPMB01000001.1 Protein Homology CDS 161844 162533 . + 0 ID=cds-WP_000113921.1;Parent=gene-CCO56_RS00835;Dbxref=GenBank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=CCO56_RS00835;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 162603 163898 . + . ID=gene-CCO56_RS00840;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=CCO56_RS00840;old_locus_tag=CCO56_00840 NZ_NPMB01000001.1 Protein Homology CDS 162603 163898 . + 0 ID=cds-WP_000893639.1;Parent=gene-CCO56_RS00840;Dbxref=GenBank:WP_000893639.1;Name=WP_000893639.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=CCO56_RS00840;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893639.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 164307 165626 . + . ID=gene-CCO56_RS00845;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CCO56_RS00845;old_locus_tag=CCO56_00845 NZ_NPMB01000001.1 Protein Homology CDS 164307 165626 . + 0 ID=cds-WP_000149625.1;Parent=gene-CCO56_RS00845;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=CCO56_RS00845;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 165701 167071 . + . ID=gene-CCO56_RS00850;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=CCO56_RS00850;old_locus_tag=CCO56_00850 NZ_NPMB01000001.1 Protein Homology CDS 165701 167071 . + 0 ID=cds-WP_000445556.1;Parent=gene-CCO56_RS00850;Dbxref=GenBank:WP_000445556.1;Name=WP_000445556.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=CCO56_RS00850;product=proline-specific permease ProY;protein_id=WP_000445556.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 167233 169050 . + . ID=gene-CCO56_RS00855;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=CCO56_RS00855;old_locus_tag=CCO56_00855 NZ_NPMB01000001.1 Protein Homology CDS 167233 169050 . + 0 ID=cds-WP_080177234.1;Parent=gene-CCO56_RS00855;Dbxref=GenBank:WP_080177234.1;Name=WP_080177234.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=CCO56_RS00855;product=maltodextrin glucosidase;protein_id=WP_080177234.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 169122 169724 . - . ID=gene-CCO56_RS00860;Name=CCO56_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00860;old_locus_tag=CCO56_00860 NZ_NPMB01000001.1 Protein Homology CDS 169122 169724 . - 0 ID=cds-WP_000244731.1;Parent=gene-CCO56_RS00860;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=CCO56_RS00860;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 169934 170515 . - . ID=gene-CCO56_RS00865;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=CCO56_RS00865;old_locus_tag=CCO56_00865 NZ_NPMB01000001.1 Protein Homology CDS 169934 170515 . - 0 ID=cds-WP_001009858.1;Parent=gene-CCO56_RS00865;Dbxref=GenBank:WP_001009858.1;Name=WP_001009858.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=CCO56_RS00865;product=ACP phosphodiesterase;protein_id=WP_001009858.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 170609 171673 . + . ID=gene-CCO56_RS00870;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CCO56_RS00870;old_locus_tag=CCO56_00870 NZ_NPMB01000001.1 Protein Homology CDS 170609 171673 . + 0 ID=cds-WP_001266525.1;Parent=gene-CCO56_RS00870;Dbxref=GenBank:WP_001266525.1;Name=WP_001266525.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=CCO56_RS00870;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266525.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 171870 172997 . + . ID=gene-CCO56_RS00880;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CCO56_RS00880;old_locus_tag=CCO56_00880 NZ_NPMB01000001.1 Protein Homology CDS 171870 172997 . + 0 ID=cds-WP_000667310.1;Parent=gene-CCO56_RS00880;Dbxref=GenBank:WP_000667310.1;Name=WP_000667310.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=CCO56_RS00880;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667310.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 173020 173352 . + . ID=gene-CCO56_RS00885;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CCO56_RS00885;old_locus_tag=CCO56_00885 NZ_NPMB01000001.1 Protein Homology CDS 173020 173352 . + 0 ID=cds-WP_000007628.1;Parent=gene-CCO56_RS00885;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=CCO56_RS00885;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 173380 175227 . + . ID=gene-CCO56_RS00890;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=CCO56_RS00890;old_locus_tag=CCO56_00890 NZ_NPMB01000001.1 Protein Homology CDS 173380 175227 . + 0 ID=cds-WP_000934811.1;Parent=gene-CCO56_RS00890;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=CCO56_RS00890;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 175238 176209 . + . ID=gene-CCO56_RS00895;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=CCO56_RS00895;old_locus_tag=CCO56_00895 NZ_NPMB01000001.1 Protein Homology CDS 175238 176209 . + 0 ID=cds-WP_000046629.1;Parent=gene-CCO56_RS00895;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=CCO56_RS00895;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 176303 176650 . + . ID=gene-CCO56_RS00900;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=CCO56_RS00900;old_locus_tag=CCO56_00900 NZ_NPMB01000001.1 Protein Homology CDS 176303 176650 . + 0 ID=cds-WP_000974818.1;Parent=gene-CCO56_RS00900;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=CCO56_RS00900;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 177089 177196 . + . ID=gene-CCO56_RS23260;Name=CCO56_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23260 NZ_NPMB01000001.1 Protein Homology CDS 177089 177196 . + 0 ID=cds-WP_000176312.1;Parent=gene-CCO56_RS23260;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=CCO56_RS23260;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 177280 178143 . - . ID=gene-CCO56_RS00915;Name=CCO56_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00915;old_locus_tag=CCO56_00915 NZ_NPMB01000001.1 Protein Homology CDS 177280 178143 . - 0 ID=cds-WP_000752021.1;Parent=gene-CCO56_RS00915;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=CCO56_RS00915;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 178443 178982 . - . ID=gene-CCO56_RS00920;Name=CCO56_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00920;old_locus_tag=CCO56_00920 NZ_NPMB01000001.1 Protein Homology CDS 178443 178982 . - 0 ID=cds-WP_000198486.1;Parent=gene-CCO56_RS00920;Dbxref=GenBank:WP_000198486.1;Name=WP_000198486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=CCO56_RS00920;product=DUF3251 domain-containing protein;protein_id=WP_000198486.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 179134 179583 . + . ID=gene-CCO56_RS00925;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CCO56_RS00925;old_locus_tag=CCO56_00925 NZ_NPMB01000001.1 Protein Homology CDS 179134 179583 . + 0 ID=cds-WP_000543533.1;Parent=gene-CCO56_RS00925;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=CCO56_RS00925;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 179587 180690 . + . ID=gene-CCO56_RS00930;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CCO56_RS00930;old_locus_tag=CCO56_00930 NZ_NPMB01000001.1 Protein Homology CDS 179587 180690 . + 0 ID=cds-WP_079946148.1;Parent=gene-CCO56_RS00930;Dbxref=GenBank:WP_079946148.1;Name=WP_079946148.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=CCO56_RS00930;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_079946148.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 180779 181249 . + . ID=gene-CCO56_RS00935;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=CCO56_RS00935;old_locus_tag=CCO56_00935 NZ_NPMB01000001.1 Protein Homology CDS 180779 181249 . + 0 ID=cds-WP_001021372.1;Parent=gene-CCO56_RS00935;Dbxref=GenBank:WP_001021372.1;Name=WP_001021372.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=CCO56_RS00935;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021372.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 181270 181689 . + . ID=gene-CCO56_RS00940;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CCO56_RS00940;old_locus_tag=CCO56_00940 NZ_NPMB01000001.1 Protein Homology CDS 181270 181689 . + 0 ID=cds-WP_000801129.1;Parent=gene-CCO56_RS00940;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=CCO56_RS00940;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 181768 182745 . + . ID=gene-CCO56_RS00945;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CCO56_RS00945;old_locus_tag=CCO56_00945 NZ_NPMB01000001.1 Protein Homology CDS 181768 182745 . + 0 ID=cds-WP_023207506.1;Parent=gene-CCO56_RS00945;Dbxref=GenBank:WP_023207506.1;Name=WP_023207506.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459414.1;locus_tag=CCO56_RS00945;product=thiamine-phosphate kinase;protein_id=WP_023207506.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 182723 183238 . + . ID=gene-CCO56_RS00950;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=CCO56_RS00950;old_locus_tag=CCO56_00950 NZ_NPMB01000001.1 Protein Homology CDS 182723 183238 . + 0 ID=cds-WP_000154059.1;Parent=gene-CCO56_RS00950;Dbxref=GenBank:WP_000154059.1;Name=WP_000154059.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=CCO56_RS00950;product=phosphatidylglycerophosphatase A;protein_id=WP_000154059.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 183246 183334 . - . ID=gene-CCO56_RS24030;Name=CCO56_RS24030;end_range=183334,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24030;partial=true;pseudo=true;start_range=.,183246 NZ_NPMB01000001.1 Protein Homology CDS 183246 183334 . - 0 ID=cds-CCO56_RS24030;Parent=gene-CCO56_RS24030;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=183334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO56_RS24030;partial=true;product=hypothetical protein;pseudo=true;start_range=.,183246;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 183342 184316 . - . ID=gene-CCO56_RS00955;Name=CCO56_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS00955;old_locus_tag=CCO56_00955 NZ_NPMB01000001.1 Protein Homology CDS 183342 184316 . - 0 ID=cds-WP_001199873.1;Parent=gene-CCO56_RS00955;Dbxref=GenBank:WP_001199873.1;Name=WP_001199873.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=CCO56_RS00955;product=aldo/keto reductase;protein_id=WP_001199873.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 184373 186235 . - . ID=gene-CCO56_RS00960;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CCO56_RS00960;old_locus_tag=CCO56_00960 NZ_NPMB01000001.1 Protein Homology CDS 184373 186235 . - 0 ID=cds-WP_000006768.1;Parent=gene-CCO56_RS00960;Dbxref=GenBank:WP_000006768.1;Name=WP_000006768.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=CCO56_RS00960;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006768.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 186259 187158 . - . ID=gene-CCO56_RS00965;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=CCO56_RS00965;old_locus_tag=CCO56_00965 NZ_NPMB01000001.1 Protein Homology CDS 186259 187158 . - 0 ID=cds-WP_000348074.1;Parent=gene-CCO56_RS00965;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=CCO56_RS00965;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 187159 187401 . - . ID=gene-CCO56_RS00970;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CCO56_RS00970;old_locus_tag=CCO56_00970 NZ_NPMB01000001.1 Protein Homology CDS 187159 187401 . - 0 ID=cds-WP_001124944.1;Parent=gene-CCO56_RS00970;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=CCO56_RS00970;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 187611 189059 . + . ID=gene-CCO56_RS00975;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CCO56_RS00975;old_locus_tag=CCO56_00975 NZ_NPMB01000001.1 Protein Homology CDS 187611 189059 . + 0 ID=cds-WP_000668648.1;Parent=gene-CCO56_RS00975;Dbxref=GenBank:WP_000668648.1;Name=WP_000668648.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=CCO56_RS00975;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668648.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 189103 189900 . - . ID=gene-CCO56_RS00980;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=CCO56_RS00980;old_locus_tag=CCO56_00980 NZ_NPMB01000001.1 Protein Homology CDS 189103 189900 . - 0 ID=cds-WP_000909790.1;Parent=gene-CCO56_RS00980;Dbxref=GenBank:WP_000909790.1;Name=WP_000909790.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=CCO56_RS00980;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909790.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 189903 190763 . - . ID=gene-CCO56_RS00985;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=CCO56_RS00985;old_locus_tag=CCO56_00985 NZ_NPMB01000001.1 Protein Homology CDS 189903 190763 . - 0 ID=cds-WP_000052716.1;Parent=gene-CCO56_RS00985;Dbxref=GenBank:WP_000052716.1;Name=WP_000052716.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459422.1;locus_tag=CCO56_RS00985;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_000052716.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 190766 191875 . - . ID=gene-CCO56_RS00990;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=CCO56_RS00990;old_locus_tag=CCO56_00990 NZ_NPMB01000001.1 Protein Homology CDS 190766 191875 . - 0 ID=cds-WP_001527281.1;Parent=gene-CCO56_RS00990;Dbxref=GenBank:WP_001527281.1;Name=WP_001527281.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=CCO56_RS00990;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_001527281.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 191881 192894 . - . ID=gene-CCO56_RS00995;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=CCO56_RS00995;old_locus_tag=CCO56_00995 NZ_NPMB01000001.1 Protein Homology CDS 191881 192894 . - 0 ID=cds-WP_000778008.1;Parent=gene-CCO56_RS00995;Dbxref=GenBank:WP_000778008.1;Name=WP_000778008.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=CCO56_RS00995;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_000778008.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 193092 193811 . - . ID=gene-CCO56_RS01000;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=CCO56_RS01000;old_locus_tag=CCO56_01000 NZ_NPMB01000001.1 Protein Homology CDS 193092 193811 . - 0 ID=cds-WP_080177235.1;Parent=gene-CCO56_RS01000;Dbxref=GenBank:WP_080177235.1;Name=WP_080177235.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=CCO56_RS01000;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_080177235.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 193951 195054 . + . ID=gene-CCO56_RS01005;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=CCO56_RS01005;old_locus_tag=CCO56_01005 NZ_NPMB01000001.1 Protein Homology CDS 193951 195054 . + 0 ID=cds-WP_001648064.1;Parent=gene-CCO56_RS01005;Dbxref=GenBank:WP_001648064.1;Name=WP_001648064.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=CCO56_RS01005;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_001648064.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 195064 195873 . + . ID=gene-CCO56_RS01010;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=CCO56_RS01010;old_locus_tag=CCO56_01010 NZ_NPMB01000001.1 Protein Homology CDS 195064 195873 . + 0 ID=cds-WP_001550221.1;Parent=gene-CCO56_RS01010;Dbxref=GenBank:WP_001550221.1;Name=WP_001550221.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=CCO56_RS01010;product=phosphonoacetaldehyde hydrolase;protein_id=WP_001550221.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 195879 195961 . + . ID=gene-CCO56_RS24035;Name=CCO56_RS24035;end_range=195961,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24035;partial=true;pseudo=true;start_range=.,195879 NZ_NPMB01000001.1 Protein Homology CDS 195879 195961 . + 0 ID=cds-CCO56_RS24035;Parent=gene-CCO56_RS24035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=195961,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO56_RS24035;partial=true;product=hypothetical protein;pseudo=true;start_range=.,195879;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 195970 196560 . - . ID=gene-CCO56_RS01015;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=CCO56_RS01015;old_locus_tag=CCO56_01015 NZ_NPMB01000001.1 Protein Homology CDS 195970 196560 . - 0 ID=cds-WP_001275807.1;Parent=gene-CCO56_RS01015;Dbxref=GenBank:WP_001275807.1;Name=WP_001275807.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=CCO56_RS01015;product=protein deglycase YajL;protein_id=WP_001275807.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 196523 197434 . - . ID=gene-CCO56_RS01020;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=CCO56_RS01020;old_locus_tag=CCO56_01020 NZ_NPMB01000001.1 Protein Homology CDS 196523 197434 . - 0 ID=cds-WP_000705816.1;Parent=gene-CCO56_RS01020;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=CCO56_RS01020;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 197560 198051 . + . ID=gene-CCO56_RS01025;Name=CCO56_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01025;old_locus_tag=CCO56_01025 NZ_NPMB01000001.1 Protein Homology CDS 197560 198051 . + 0 ID=cds-WP_001138913.1;Parent=gene-CCO56_RS01025;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO56_RS01025;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 198098 199462 . - . ID=gene-CCO56_RS01030;Name=CCO56_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01030;old_locus_tag=CCO56_01030 NZ_NPMB01000001.1 Protein Homology CDS 198098 199462 . - 0 ID=cds-WP_001000935.1;Parent=gene-CCO56_RS01030;Dbxref=GenBank:WP_001000935.1;Name=WP_001000935.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=CCO56_RS01030;product=MFS transporter;protein_id=WP_001000935.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 199683 200573 . - . ID=gene-CCO56_RS01035;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CCO56_RS01035;old_locus_tag=CCO56_01035 NZ_NPMB01000001.1 Protein Homology CDS 199683 200573 . - 0 ID=cds-WP_080177236.1;Parent=gene-CCO56_RS01035;Dbxref=GenBank:WP_080177236.1;Name=WP_080177236.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=CCO56_RS01035;product=heme o synthase;protein_id=WP_080177236.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 200585 200914 . - . ID=gene-CCO56_RS01040;Name=CCO56_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01040;old_locus_tag=CCO56_01040 NZ_NPMB01000001.1 Protein Homology CDS 200585 200914 . - 0 ID=cds-WP_000019878.1;Parent=gene-CCO56_RS01040;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=CCO56_RS01040;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 200914 201528 . - . ID=gene-CCO56_RS01045;Name=CCO56_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01045;old_locus_tag=CCO56_01045 NZ_NPMB01000001.1 Protein Homology CDS 200914 201528 . - 0 ID=cds-WP_000179833.1;Parent=gene-CCO56_RS01045;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=CCO56_RS01045;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 201518 203509 . - . ID=gene-CCO56_RS01050;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=CCO56_RS01050;old_locus_tag=CCO56_01050 NZ_NPMB01000001.1 Protein Homology CDS 201518 203509 . - 0 ID=cds-WP_000467158.1;Parent=gene-CCO56_RS01050;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=CCO56_RS01050;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 203520 204476 . - . ID=gene-CCO56_RS01055;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=CCO56_RS01055;old_locus_tag=CCO56_01055 NZ_NPMB01000001.1 Protein Homology CDS 203520 204476 . - 0 ID=cds-WP_001239448.1;Parent=gene-CCO56_RS01055;Dbxref=GenBank:WP_001239448.1;Name=WP_001239448.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=CCO56_RS01055;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239448.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 204929 206404 . - . ID=gene-CCO56_RS01060;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=CCO56_RS01060;old_locus_tag=CCO56_01060 NZ_NPMB01000001.1 Protein Homology CDS 204929 206404 . - 0 ID=cds-WP_000098483.1;Parent=gene-CCO56_RS01060;Dbxref=GenBank:WP_000098483.1;Name=WP_000098483.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=CCO56_RS01060;product=muropeptide MFS transporter AmpG;protein_id=WP_000098483.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 206448 207026 . - . ID=gene-CCO56_RS01065;Name=CCO56_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01065;old_locus_tag=CCO56_01065 NZ_NPMB01000001.1 Protein Homology CDS 206448 207026 . - 0 ID=cds-WP_094882033.1;Parent=gene-CCO56_RS01065;Dbxref=GenBank:WP_094882033.1;Name=WP_094882033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=CCO56_RS01065;product=lipoprotein;protein_id=WP_094882033.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 207330 207647 . + . ID=gene-CCO56_RS01075;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=CCO56_RS01075;old_locus_tag=CCO56_01075 NZ_NPMB01000001.1 Protein Homology CDS 207330 207647 . + 0 ID=cds-WP_000973433.1;Parent=gene-CCO56_RS01075;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=CCO56_RS01075;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 207994 209292 . + . ID=gene-CCO56_RS01085;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CCO56_RS01085;old_locus_tag=CCO56_01085 NZ_NPMB01000001.1 Protein Homology CDS 207994 209292 . + 0 ID=cds-WP_001198406.1;Parent=gene-CCO56_RS01085;Dbxref=GenBank:WP_001198406.1;Name=WP_001198406.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=CCO56_RS01085;product=trigger factor;protein_id=WP_001198406.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 209539 210162 . + . ID=gene-CCO56_RS01090;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CCO56_RS01090;old_locus_tag=CCO56_01090 NZ_NPMB01000001.1 Protein Homology CDS 209539 210162 . + 0 ID=cds-WP_000122257.1;Parent=gene-CCO56_RS01090;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=CCO56_RS01090;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 210414 211685 . + . ID=gene-CCO56_RS01095;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CCO56_RS01095;old_locus_tag=CCO56_01095 NZ_NPMB01000001.1 Protein Homology CDS 210414 211685 . + 0 ID=cds-WP_000130314.1;Parent=gene-CCO56_RS01095;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=CCO56_RS01095;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 211871 214225 . + . ID=gene-CCO56_RS01100;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CCO56_RS01100;old_locus_tag=CCO56_01100 NZ_NPMB01000001.1 Protein Homology CDS 211871 214225 . + 0 ID=cds-WP_001067723.1;Parent=gene-CCO56_RS01100;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=CCO56_RS01100;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 214416 214706 . + . ID=gene-CCO56_RS01105;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=CCO56_RS01105;old_locus_tag=CCO56_01105 NZ_NPMB01000001.1 Protein Homology CDS 214416 214706 . + 0 ID=cds-WP_254888479.1;Parent=gene-CCO56_RS01105;Dbxref=GenBank:WP_254888479.1;Name=WP_254888479.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=CCO56_RS01105;product=nucleoid-associated protein HU-beta;protein_id=WP_254888479.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 214997 216868 . + . ID=gene-CCO56_RS01110;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=CCO56_RS01110;old_locus_tag=CCO56_01110 NZ_NPMB01000001.1 Protein Homology CDS 214997 216868 . + 0 ID=cds-WP_000969426.1;Parent=gene-CCO56_RS01110;Dbxref=GenBank:WP_000969426.1;Name=WP_000969426.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=CCO56_RS01110;product=peptidylprolyl isomerase;protein_id=WP_000969426.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 217018 217392 . + . ID=gene-CCO56_RS01115;Name=CCO56_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01115;old_locus_tag=CCO56_01115 NZ_NPMB01000001.1 Protein Homology CDS 217018 217392 . + 0 ID=cds-WP_000680322.1;Parent=gene-CCO56_RS01115;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=CCO56_RS01115;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 217496 217894 . + . ID=gene-CCO56_RS01120;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=CCO56_RS01120;old_locus_tag=CCO56_01120 NZ_NPMB01000001.1 Protein Homology CDS 217496 217894 . + 0 ID=cds-WP_001194543.1;Parent=gene-CCO56_RS01120;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=CCO56_RS01120;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 218000 218695 . - . ID=gene-CCO56_RS01125;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CCO56_RS01125;old_locus_tag=CCO56_01125 NZ_NPMB01000001.1 Protein Homology CDS 218000 218695 . - 0 ID=cds-WP_000817201.1;Parent=gene-CCO56_RS01125;Dbxref=GenBank:WP_000817201.1;Name=WP_000817201.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=CCO56_RS01125;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817201.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 218760 220460 . - . ID=gene-CCO56_RS01130;Name=CCO56_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01130;old_locus_tag=CCO56_01130 NZ_NPMB01000001.1 Protein Homology CDS 218760 220460 . - 0 ID=cds-WP_001238171.1;Parent=gene-CCO56_RS01130;Dbxref=GenBank:WP_001238171.1;Name=WP_001238171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=CCO56_RS01130;product=SgrR family transcriptional regulator;protein_id=WP_001238171.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 220561 221379 . + . ID=gene-CCO56_RS01135;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=CCO56_RS01135;old_locus_tag=CCO56_01135 NZ_NPMB01000001.1 Protein Homology CDS 220561 221379 . + 0 ID=cds-WP_094882026.1;Parent=gene-CCO56_RS01135;Dbxref=GenBank:WP_094882026.1;Name=WP_094882026.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=CCO56_RS01135;product=HMP-PP phosphatase;protein_id=WP_094882026.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 221429 222484 . - . ID=gene-CCO56_RS01140;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=CCO56_RS01140;old_locus_tag=CCO56_01140 NZ_NPMB01000001.1 Protein Homology CDS 221429 222484 . - 0 ID=cds-WP_000987849.1;Parent=gene-CCO56_RS01140;Dbxref=GenBank:WP_000987849.1;Name=WP_000987849.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=CCO56_RS01140;product=cysteine desulfhydrase;protein_id=WP_000987849.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 222597 223055 . + . ID=gene-CCO56_RS01145;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=CCO56_RS01145;old_locus_tag=CCO56_01145 NZ_NPMB01000001.1 Protein Homology CDS 222597 223055 . + 0 ID=cds-WP_000884593.1;Parent=gene-CCO56_RS01145;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=CCO56_RS01145;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 223096 224868 . + . ID=gene-CCO56_RS01150;Name=CCO56_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01150;old_locus_tag=CCO56_01150 NZ_NPMB01000001.1 Protein Homology CDS 223096 224868 . + 0 ID=cds-WP_023136503.1;Parent=gene-CCO56_RS01150;Dbxref=GenBank:WP_023136503.1;Name=WP_023136503.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=CCO56_RS01150;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_023136503.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 224861 226642 . + . ID=gene-CCO56_RS01155;Name=CCO56_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01155;old_locus_tag=CCO56_01155 NZ_NPMB01000001.1 Protein Homology CDS 224861 226642 . + 0 ID=cds-WP_023136502.1;Parent=gene-CCO56_RS01155;Dbxref=GenBank:WP_023136502.1;Name=WP_023136502.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=CCO56_RS01155;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_023136502.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 226674 226799 . - . ID=gene-CCO56_RS23925;Name=CCO56_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23925 NZ_NPMB01000001.1 GeneMarkS-2+ CDS 226674 226799 . - 0 ID=cds-WP_254888881.1;Parent=gene-CCO56_RS23925;Dbxref=GenBank:WP_254888881.1;Name=WP_254888881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS23925;product=hypothetical protein;protein_id=WP_254888881.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 226855 227193 . + . ID=gene-CCO56_RS01160;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=CCO56_RS01160;old_locus_tag=CCO56_01160 NZ_NPMB01000001.1 Protein Homology CDS 226855 227193 . + 0 ID=cds-WP_000780341.1;Parent=gene-CCO56_RS01160;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=CCO56_RS01160;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 227225 228511 . + . ID=gene-CCO56_RS01165;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=CCO56_RS01165;old_locus_tag=CCO56_01165 NZ_NPMB01000001.1 Protein Homology CDS 227225 228511 . + 0 ID=cds-WP_000684917.1;Parent=gene-CCO56_RS01165;Dbxref=GenBank:WP_000684917.1;Name=WP_000684917.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=CCO56_RS01165;product=ammonium transporter AmtB;protein_id=WP_000684917.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 228611 229471 . - . ID=gene-CCO56_RS01170;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=CCO56_RS01170;old_locus_tag=CCO56_01170 NZ_NPMB01000001.1 Protein Homology CDS 228611 229471 . - 0 ID=cds-WP_000084176.1;Parent=gene-CCO56_RS01170;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=CCO56_RS01170;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 229686 230255 . + . ID=gene-CCO56_RS01175;Name=CCO56_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01175;old_locus_tag=CCO56_01175 NZ_NPMB01000001.1 Protein Homology CDS 229686 230255 . + 0 ID=cds-WP_000779802.1;Parent=gene-CCO56_RS01175;Dbxref=GenBank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=CCO56_RS01175;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 230288 230677 . - . ID=gene-CCO56_RS01180;Name=CCO56_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01180;old_locus_tag=CCO56_01180 NZ_NPMB01000001.1 Protein Homology CDS 230288 230677 . - 0 ID=cds-WP_000961285.1;Parent=gene-CCO56_RS01180;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=CCO56_RS01180;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 230762 230858 . + . ID=gene-CCO56_RS01185;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CCO56_RS01185;old_locus_tag=CCO56_01185 NZ_NPMB01000001.1 cmsearch SRP_RNA 230762 230858 . + . ID=rna-CCO56_RS01185;Parent=gene-CCO56_RS01185;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS01185;product=signal recognition particle sRNA small type NZ_NPMB01000001.1 cmsearch exon 230762 230858 . + . ID=exon-CCO56_RS01185-1;Parent=rna-CCO56_RS01185;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS01185;product=signal recognition particle sRNA small type NZ_NPMB01000001.1 RefSeq gene 230908 232458 . - . ID=gene-CCO56_RS01190;Name=CCO56_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01190;old_locus_tag=CCO56_01190 NZ_NPMB01000001.1 Protein Homology CDS 230908 232458 . - 0 ID=cds-WP_080177337.1;Parent=gene-CCO56_RS01190;Dbxref=GenBank:WP_080177337.1;Name=WP_080177337.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=CCO56_RS01190;product=EAL domain-containing protein;protein_id=WP_080177337.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 232683 232943 . + . ID=gene-CCO56_RS01195;Name=CCO56_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01195;old_locus_tag=CCO56_01195 NZ_NPMB01000001.1 Protein Homology CDS 232683 232943 . + 0 ID=cds-WP_000801415.1;Parent=gene-CCO56_RS01195;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=CCO56_RS01195;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 232949 233089 . + . ID=gene-CCO56_RS01200;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=CCO56_RS01200;old_locus_tag=CCO56_01200 NZ_NPMB01000001.1 Protein Homology CDS 232949 233089 . + 0 ID=cds-WP_001197749.1;Parent=gene-CCO56_RS01200;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=CCO56_RS01200;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 233145 233615 . - . ID=gene-CCO56_RS01205;Name=CCO56_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01205;old_locus_tag=CCO56_01205 NZ_NPMB01000001.1 Protein Homology CDS 233145 233615 . - 0 ID=cds-WP_000136183.1;Parent=gene-CCO56_RS01205;Dbxref=GenBank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=CCO56_RS01205;product=YlaC family protein;protein_id=WP_000136183.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 233733 234284 . - . ID=gene-CCO56_RS01210;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=CCO56_RS01210;old_locus_tag=CCO56_01210 NZ_NPMB01000001.1 Protein Homology CDS 233733 234284 . - 0 ID=cds-WP_080177338.1;Parent=gene-CCO56_RS01210;Dbxref=GenBank:WP_080177338.1;Name=WP_080177338.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=CCO56_RS01210;product=maltose O-acetyltransferase;protein_id=WP_080177338.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 234463 234681 . - . ID=gene-CCO56_RS01215;Name=CCO56_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01215;old_locus_tag=CCO56_01215 NZ_NPMB01000001.1 Protein Homology CDS 234463 234681 . - 0 ID=cds-WP_001280991.1;Parent=gene-CCO56_RS01215;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=CCO56_RS01215;product=HHA domain-containing protein;protein_id=WP_001280991.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 234709 235083 . - . ID=gene-CCO56_RS01220;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=CCO56_RS01220;old_locus_tag=CCO56_01220 NZ_NPMB01000001.1 Protein Homology CDS 234709 235083 . - 0 ID=cds-WP_000344807.1;Parent=gene-CCO56_RS01220;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=CCO56_RS01220;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 235579 238728 . - . ID=gene-CCO56_RS01225;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=CCO56_RS01225;old_locus_tag=CCO56_01225 NZ_NPMB01000001.1 Protein Homology CDS 235579 238728 . - 0 ID=cds-WP_001132508.1;Parent=gene-CCO56_RS01225;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=CCO56_RS01225;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 238751 239944 . - . ID=gene-CCO56_RS01230;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=CCO56_RS01230;old_locus_tag=CCO56_01230 NZ_NPMB01000001.1 Protein Homology CDS 238751 239944 . - 0 ID=cds-WP_001039202.1;Parent=gene-CCO56_RS01230;Dbxref=GenBank:WP_001039202.1;Name=WP_001039202.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=CCO56_RS01230;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039202.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 240086 240739 . + . ID=gene-CCO56_RS01235;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=CCO56_RS01235;old_locus_tag=CCO56_01235 NZ_NPMB01000001.1 Protein Homology CDS 240086 240739 . + 0 ID=cds-WP_000101755.1;Parent=gene-CCO56_RS01235;Dbxref=GenBank:WP_000101755.1;Name=WP_000101755.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=CCO56_RS01235;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101755.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 240858 244220 . + . ID=gene-CCO56_RS01240;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=CCO56_RS01240;old_locus_tag=CCO56_01240 NZ_NPMB01000001.1 Protein Homology CDS 240858 244220 . + 0 ID=cds-WP_023217224.1;Parent=gene-CCO56_RS01240;Dbxref=GenBank:WP_023217224.1;Name=WP_023217224.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=CCO56_RS01240;product=mechanosensitive channel MscK;protein_id=WP_023217224.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 244262 245185 . - . ID=gene-CCO56_RS01245;Name=CCO56_RS01245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS01245;old_locus_tag=CCO56_01245;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 244262 245185 . - 0 ID=cds-CCO56_RS01245;Parent=gene-CCO56_RS01245;Note=internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=CCO56_RS01245;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 245255 245422 . - . ID=gene-CCO56_RS01250;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=CCO56_RS01250;old_locus_tag=CCO56_01250 NZ_NPMB01000001.1 Protein Homology CDS 245255 245422 . - 0 ID=cds-WP_000051161.1;Parent=gene-CCO56_RS01250;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=CCO56_RS01250;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 245436 245963 . - . ID=gene-CCO56_RS01255;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=CCO56_RS01255;old_locus_tag=CCO56_01255 NZ_NPMB01000001.1 Protein Homology CDS 245436 245963 . - 0 ID=cds-WP_001575715.1;Parent=gene-CCO56_RS01255;Dbxref=GenBank:WP_001575715.1;Name=WP_001575715.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=CCO56_RS01255;product=primosomal replication protein N'';protein_id=WP_001575715.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 246032 246409 . + . ID=gene-CCO56_RS01260;Name=CCO56_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01260;old_locus_tag=CCO56_01260 NZ_NPMB01000001.1 Protein Homology CDS 246032 246409 . + 0 ID=cds-WP_001189860.1;Parent=gene-CCO56_RS01260;Dbxref=GenBank:WP_001189860.1;Name=WP_001189860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=CCO56_RS01260;product=DUF454 family protein;protein_id=WP_001189860.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 246562 247113 . + . ID=gene-CCO56_RS01270;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=CCO56_RS01270;old_locus_tag=CCO56_01270 NZ_NPMB01000001.1 Protein Homology CDS 246562 247113 . + 0 ID=cds-WP_000127350.1;Parent=gene-CCO56_RS01270;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=CCO56_RS01270;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 247227 249155 . + . ID=gene-CCO56_RS01275;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CCO56_RS01275;old_locus_tag=CCO56_01275 NZ_NPMB01000001.1 Protein Homology CDS 247227 249155 . + 0 ID=cds-WP_094882027.1;Parent=gene-CCO56_RS01275;Dbxref=GenBank:WP_094882027.1;Name=WP_094882027.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=CCO56_RS01275;product=DNA polymerase III subunit gamma/tau;protein_id=WP_094882027.1;transl_table=11 NZ_NPMB01000001.1 cmsearch sequence_feature 248488 248552 . + . ID=id-CCO56_RS01275;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS01275 NZ_NPMB01000001.1 RefSeq gene 249201 249530 . + . ID=gene-CCO56_RS01280;Name=CCO56_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01280;old_locus_tag=CCO56_01280 NZ_NPMB01000001.1 Protein Homology CDS 249201 249530 . + 0 ID=cds-WP_000467098.1;Parent=gene-CCO56_RS01280;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=CCO56_RS01280;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 249530 250135 . + . ID=gene-CCO56_RS01285;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CCO56_RS01285;old_locus_tag=CCO56_01285 NZ_NPMB01000001.1 Protein Homology CDS 249530 250135 . + 0 ID=cds-WP_001195023.1;Parent=gene-CCO56_RS01285;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=CCO56_RS01285;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 250246 252120 . + . ID=gene-CCO56_RS01290;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=CCO56_RS01290;old_locus_tag=CCO56_01290 NZ_NPMB01000001.1 Protein Homology CDS 250246 252120 . + 0 ID=cds-WP_001543201.1;Parent=gene-CCO56_RS01290;Dbxref=GenBank:WP_001543201.1;Name=WP_001543201.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=CCO56_RS01290;product=molecular chaperone HtpG;protein_id=WP_001543201.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 252478 253122 . + . ID=gene-CCO56_RS01300;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=CCO56_RS01300;old_locus_tag=CCO56_01300 NZ_NPMB01000001.1 Protein Homology CDS 252478 253122 . + 0 ID=cds-WP_001220237.1;Parent=gene-CCO56_RS01300;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=CCO56_RS01300;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 253350 254312 . + . ID=gene-CCO56_RS01305;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CCO56_RS01305;old_locus_tag=CCO56_01305 NZ_NPMB01000001.1 Protein Homology CDS 253350 254312 . + 0 ID=cds-WP_001250078.1;Parent=gene-CCO56_RS01305;Dbxref=GenBank:WP_001250078.1;Name=WP_001250078.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=CCO56_RS01305;product=ferrochelatase;protein_id=WP_001250078.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 254309 255280 . - . ID=gene-CCO56_RS01310;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=CCO56_RS01310;old_locus_tag=CCO56_01310 NZ_NPMB01000001.1 Protein Homology CDS 254309 255280 . - 0 ID=cds-WP_023212903.1;Parent=gene-CCO56_RS01310;Dbxref=GenBank:WP_023212903.1;Name=WP_023212903.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=CCO56_RS01310;product=acetyl esterase;protein_id=WP_023212903.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 255433 256737 . + . ID=gene-CCO56_RS01315;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=CCO56_RS01315;old_locus_tag=CCO56_01315 NZ_NPMB01000001.1 Protein Homology CDS 255433 256737 . + 0 ID=cds-WP_000671592.1;Parent=gene-CCO56_RS01315;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=CCO56_RS01315;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 256786 258462 . - . ID=gene-CCO56_RS01320;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=CCO56_RS01320;old_locus_tag=CCO56_01320 NZ_NPMB01000001.1 Protein Homology CDS 256786 258462 . - 0 ID=cds-WP_000546202.1;Parent=gene-CCO56_RS01320;Dbxref=GenBank:WP_000546202.1;Name=WP_000546202.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=CCO56_RS01320;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546202.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 258677 259897 . - . ID=gene-CCO56_RS01325;Name=CCO56_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01325;old_locus_tag=CCO56_01325 NZ_NPMB01000001.1 Protein Homology CDS 258677 259897 . - 0 ID=cds-WP_001251593.1;Parent=gene-CCO56_RS01325;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=CCO56_RS01325;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 260070 261722 . + . ID=gene-CCO56_RS01330;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=CCO56_RS01330;old_locus_tag=CCO56_01330 NZ_NPMB01000001.1 Protein Homology CDS 260070 261722 . + 0 ID=cds-WP_000670402.1;Parent=gene-CCO56_RS01330;Dbxref=GenBank:WP_000670402.1;Name=WP_000670402.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=CCO56_RS01330;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670402.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 261839 262318 . - . ID=gene-CCO56_RS01335;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CCO56_RS01335;old_locus_tag=CCO56_01335 NZ_NPMB01000001.1 Protein Homology CDS 261839 262318 . - 0 ID=cds-WP_000186618.1;Parent=gene-CCO56_RS01335;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=CCO56_RS01335;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 262520 263314 . - . ID=gene-CCO56_RS01340;Name=CCO56_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01340;old_locus_tag=CCO56_01340 NZ_NPMB01000001.1 Protein Homology CDS 262520 263314 . - 0 ID=cds-WP_023212905.1;Parent=gene-CCO56_RS01340;Dbxref=GenBank:WP_023212905.1;Name=WP_023212905.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=CCO56_RS01340;product=TraB/GumN family protein;protein_id=WP_023212905.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 263399 264226 . - . ID=gene-CCO56_RS01345;Name=CCO56_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01345;old_locus_tag=CCO56_01345 NZ_NPMB01000001.1 Protein Homology CDS 263399 264226 . - 0 ID=cds-WP_000488534.1;Parent=gene-CCO56_RS01345;Dbxref=GenBank:WP_000488534.1;Name=WP_000488534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=CCO56_RS01345;product=lysozyme inhibitor LprI family protein;protein_id=WP_000488534.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 264379 266880 . - . ID=gene-CCO56_RS01350;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=CCO56_RS01350;old_locus_tag=CCO56_01350 NZ_NPMB01000001.1 Protein Homology CDS 264379 266880 . - 0 ID=cds-WP_080177254.1;Parent=gene-CCO56_RS01350;Dbxref=GenBank:WP_080177254.1;Name=WP_080177254.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=CCO56_RS01350;product=copper-exporting P-type ATPase CopA;protein_id=WP_080177254.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 266990 267406 . + . ID=gene-CCO56_RS01355;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=CCO56_RS01355;old_locus_tag=CCO56_01355 NZ_NPMB01000001.1 Protein Homology CDS 266990 267406 . + 0 ID=cds-WP_001026760.1;Parent=gene-CCO56_RS01355;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=CCO56_RS01355;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 267407 267859 . - . ID=gene-CCO56_RS01360;Name=CCO56_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01360;old_locus_tag=CCO56_01360 NZ_NPMB01000001.1 Protein Homology CDS 267407 267859 . - 0 ID=cds-WP_000561177.1;Parent=gene-CCO56_RS01360;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=CCO56_RS01360;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 267856 268773 . - . ID=gene-CCO56_RS01365;Name=CCO56_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01365;old_locus_tag=CCO56_01365 NZ_NPMB01000001.1 Protein Homology CDS 267856 268773 . - 0 ID=cds-WP_000906146.1;Parent=gene-CCO56_RS01365;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=CCO56_RS01365;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 268920 269597 . + . ID=gene-CCO56_RS01370;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=CCO56_RS01370;old_locus_tag=CCO56_01370 NZ_NPMB01000001.1 Protein Homology CDS 268920 269597 . + 0 ID=cds-WP_000140195.1;Parent=gene-CCO56_RS01370;Dbxref=GenBank:WP_000140195.1;Name=WP_000140195.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=CCO56_RS01370;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_000140195.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 269584 270363 . + . ID=gene-CCO56_RS01375;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=CCO56_RS01375;old_locus_tag=CCO56_01375 NZ_NPMB01000001.1 Protein Homology CDS 269584 270363 . + 0 ID=cds-WP_001002130.1;Parent=gene-CCO56_RS01375;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=CCO56_RS01375;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 270449 271303 . - . ID=gene-CCO56_RS01380;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=CCO56_RS01380;old_locus_tag=CCO56_01380 NZ_NPMB01000001.1 Protein Homology CDS 270449 271303 . - 0 ID=cds-WP_000116060.1;Parent=gene-CCO56_RS01380;Dbxref=GenBank:WP_000116060.1;Name=WP_000116060.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=CCO56_RS01380;product=chaperedoxin;protein_id=WP_000116060.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 271363 272133 . - . ID=gene-CCO56_RS01385;Name=CCO56_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01385;old_locus_tag=CCO56_01385 NZ_NPMB01000001.1 Protein Homology CDS 271363 272133 . - 0 ID=cds-WP_023207523.1;Parent=gene-CCO56_RS01385;Dbxref=GenBank:WP_023207523.1;Name=WP_023207523.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=CCO56_RS01385;product=SDR family oxidoreductase;protein_id=WP_023207523.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 272288 272902 . - . ID=gene-CCO56_RS01390;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=CCO56_RS01390;old_locus_tag=CCO56_01390 NZ_NPMB01000001.1 Protein Homology CDS 272288 272902 . - 0 ID=cds-WP_001010574.1;Parent=gene-CCO56_RS01390;Dbxref=GenBank:WP_001010574.1;Name=WP_001010574.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=CCO56_RS01390;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010574.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 272873 273559 . + . ID=gene-CCO56_RS01395;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=CCO56_RS01395;old_locus_tag=CCO56_01395 NZ_NPMB01000001.1 Protein Homology CDS 272873 273559 . + 0 ID=cds-WP_001110598.1;Parent=gene-CCO56_RS01395;Dbxref=GenBank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=CCO56_RS01395;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110598.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 273556 275970 . + . ID=gene-CCO56_RS01400;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=CCO56_RS01400;old_locus_tag=CCO56_01400 NZ_NPMB01000001.1 Protein Homology CDS 273556 275970 . + 0 ID=cds-WP_080177253.1;Parent=gene-CCO56_RS01400;Dbxref=GenBank:WP_080177253.1;Name=WP_080177253.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=CCO56_RS01400;product=putative ABC transporter permease subunit YbbP;protein_id=WP_080177253.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 276156 277289 . + . ID=gene-CCO56_RS01405;Name=CCO56_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01405;old_locus_tag=CCO56_01405 NZ_NPMB01000001.1 Protein Homology CDS 276156 277289 . + 0 ID=cds-WP_000152866.1;Parent=gene-CCO56_RS01405;Dbxref=GenBank:WP_000152866.1;Name=WP_000152866.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=CCO56_RS01405;product=porin;protein_id=WP_000152866.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 277546 278376 . + . ID=gene-CCO56_RS01410;Name=CCO56_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01410;old_locus_tag=CCO56_01410 NZ_NPMB01000001.1 Protein Homology CDS 277546 278376 . + 0 ID=cds-WP_000524317.1;Parent=gene-CCO56_RS01410;Dbxref=GenBank:WP_000524317.1;Name=WP_000524317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=CCO56_RS01410;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524317.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 278413 279429 . + . ID=gene-CCO56_RS01415;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=CCO56_RS01415;old_locus_tag=CCO56_01415 NZ_NPMB01000001.1 Protein Homology CDS 278413 279429 . + 0 ID=cds-WP_000569656.1;Parent=gene-CCO56_RS01415;Dbxref=GenBank:WP_000569656.1;Name=WP_000569656.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=CCO56_RS01415;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569656.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 279422 280081 . + . ID=gene-CCO56_RS01420;Name=CCO56_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01420;old_locus_tag=CCO56_01420 NZ_NPMB01000001.1 Protein Homology CDS 279422 280081 . + 0 ID=cds-WP_080177252.1;Parent=gene-CCO56_RS01420;Dbxref=GenBank:WP_080177252.1;Name=WP_080177252.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=CCO56_RS01420;product=methionine ABC transporter permease;protein_id=WP_080177252.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 280120 281205 . - . ID=gene-CCO56_RS01425;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=CCO56_RS01425;old_locus_tag=CCO56_01425 NZ_NPMB01000001.1 Protein Homology CDS 280120 281205 . - 0 ID=cds-WP_000997742.1;Parent=gene-CCO56_RS01425;Dbxref=GenBank:WP_000997742.1;Name=WP_000997742.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997743.1;locus_tag=CCO56_RS01425;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_000997742.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 281301 282368 . - . ID=gene-CCO56_RS01430;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CCO56_RS01430;old_locus_tag=CCO56_01430 NZ_NPMB01000001.1 Protein Homology CDS 281301 282368 . - 0 ID=cds-WP_000815601.1;Parent=gene-CCO56_RS01430;Dbxref=GenBank:WP_000815601.1;Name=WP_000815601.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=CCO56_RS01430;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815601.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 282365 282874 . - . ID=gene-CCO56_RS01435;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CCO56_RS01435;old_locus_tag=CCO56_01435 NZ_NPMB01000001.1 Protein Homology CDS 282365 282874 . - 0 ID=cds-WP_000098736.1;Parent=gene-CCO56_RS01435;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=CCO56_RS01435;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 282992 283714 . - . ID=gene-CCO56_RS01445;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=CCO56_RS01445;old_locus_tag=CCO56_01445 NZ_NPMB01000001.1 Protein Homology CDS 282992 283714 . - 0 ID=cds-WP_000212281.1;Parent=gene-CCO56_RS01445;Dbxref=GenBank:WP_000212281.1;Name=WP_000212281.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=CCO56_RS01445;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212281.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 283717 284211 . - . ID=gene-CCO56_RS01450;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=CCO56_RS01450;old_locus_tag=CCO56_01450 NZ_NPMB01000001.1 Protein Homology CDS 283717 284211 . - 0 ID=cds-WP_000255991.1;Parent=gene-CCO56_RS01450;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=CCO56_RS01450;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 284384 285769 . + . ID=gene-CCO56_RS01455;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CCO56_RS01455;old_locus_tag=CCO56_01455 NZ_NPMB01000001.1 Protein Homology CDS 284384 285769 . + 0 ID=cds-WP_080177251.1;Parent=gene-CCO56_RS01455;Dbxref=GenBank:WP_080177251.1;Name=WP_080177251.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=CCO56_RS01455;product=cysteine--tRNA ligase;protein_id=WP_080177251.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 285813 286637 . - . ID=gene-CCO56_RS01460;Name=CCO56_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01460;old_locus_tag=CCO56_01460 NZ_NPMB01000001.1 Protein Homology CDS 285813 286637 . - 0 ID=cds-WP_000819112.1;Parent=gene-CCO56_RS01460;Dbxref=GenBank:WP_000819112.1;Name=WP_000819112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=CCO56_RS01460;product=DUF2145 domain-containing protein;protein_id=WP_000819112.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 286634 287071 . - . ID=gene-CCO56_RS01465;Name=CCO56_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01465;old_locus_tag=CCO56_01465 NZ_NPMB01000001.1 Protein Homology CDS 286634 287071 . - 0 ID=cds-WP_001038577.1;Parent=gene-CCO56_RS01465;Dbxref=GenBank:WP_001038577.1;Name=WP_001038577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=CCO56_RS01465;product=STM0539 family protein;protein_id=WP_001038577.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 287064 287609 . - . ID=gene-CCO56_RS01470;Name=CCO56_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01470;old_locus_tag=CCO56_01470 NZ_NPMB01000001.1 Protein Homology CDS 287064 287609 . - 0 ID=cds-WP_023137270.1;Parent=gene-CCO56_RS01470;Dbxref=GenBank:WP_023137270.1;Name=WP_023137270.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=CCO56_RS01470;product=metal-dependent hydrolase;protein_id=WP_023137270.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 287737 287949 . - . ID=gene-CCO56_RS01475;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=CCO56_RS01475;old_locus_tag=CCO56_01475 NZ_NPMB01000001.1 Protein Homology CDS 287737 287949 . - 0 ID=cds-WP_000190278.1;Parent=gene-CCO56_RS01475;Dbxref=GenBank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=CCO56_RS01475;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 287951 288817 . - . ID=gene-CCO56_RS01480;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CCO56_RS01480;old_locus_tag=CCO56_01480 NZ_NPMB01000001.1 Protein Homology CDS 287951 288817 . - 0 ID=cds-WP_000729165.1;Parent=gene-CCO56_RS01480;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=CCO56_RS01480;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 289364 289921 . + . ID=gene-CCO56_RS01490;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=CCO56_RS01490;old_locus_tag=CCO56_01490 NZ_NPMB01000001.1 Protein Homology CDS 289364 289921 . + 0 ID=cds-WP_000681026.1;Parent=gene-CCO56_RS01490;Dbxref=GenBank:WP_000681026.1;Name=WP_000681026.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=CCO56_RS01490;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000681026.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 289996 290529 . + . ID=gene-CCO56_RS01495;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=CCO56_RS01495;old_locus_tag=CCO56_01495 NZ_NPMB01000001.1 Protein Homology CDS 289996 290529 . + 0 ID=cds-WP_000619614.1;Parent=gene-CCO56_RS01495;Dbxref=GenBank:WP_000619614.1;Name=WP_000619614.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=CCO56_RS01495;product=type 1 fimbrial protein subunit FimI;protein_id=WP_000619614.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 290573 291265 . + . ID=gene-CCO56_RS01500;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=CCO56_RS01500;old_locus_tag=CCO56_01500 NZ_NPMB01000001.1 Protein Homology CDS 290573 291265 . + 0 ID=cds-WP_001531073.1;Parent=gene-CCO56_RS01500;Dbxref=GenBank:WP_001531073.1;Name=WP_001531073.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=CCO56_RS01500;product=type 1 fimbria chaperone FimC;protein_id=WP_001531073.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 291296 293908 . + . ID=gene-CCO56_RS01505;Name=CCO56_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01505;old_locus_tag=CCO56_01505 NZ_NPMB01000001.1 Protein Homology CDS 291296 293908 . + 0 ID=cds-WP_000754218.1;Parent=gene-CCO56_RS01505;Dbxref=GenBank:WP_000754218.1;Name=WP_000754218.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=CCO56_RS01505;product=fimbrial biogenesis usher protein;protein_id=WP_000754218.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 293923 294930 . + . ID=gene-CCO56_RS01510;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=CCO56_RS01510;old_locus_tag=CCO56_01510 NZ_NPMB01000001.1 Protein Homology CDS 293923 294930 . + 0 ID=cds-WP_000708659.1;Parent=gene-CCO56_RS01510;Dbxref=GenBank:WP_000708659.1;Name=WP_000708659.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=CCO56_RS01510;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000708659.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 294940 295458 . + . ID=gene-CCO56_RS01515;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=CCO56_RS01515;old_locus_tag=CCO56_01515 NZ_NPMB01000001.1 Protein Homology CDS 294940 295458 . + 0 ID=cds-WP_000603406.1;Parent=gene-CCO56_RS01515;Dbxref=GenBank:WP_000603406.1;Name=WP_000603406.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=CCO56_RS01515;product=fimbria assembly protein;protein_id=WP_000603406.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 295504 296136 . - . ID=gene-CCO56_RS01520;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=CCO56_RS01520;old_locus_tag=CCO56_01520 NZ_NPMB01000001.1 Protein Homology CDS 295504 296136 . - 0 ID=cds-WP_000801272.1;Parent=gene-CCO56_RS01520;Dbxref=GenBank:WP_000801272.1;Name=WP_000801272.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=CCO56_RS01520;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801272.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 296740 297462 . - . ID=gene-CCO56_RS01525;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=CCO56_RS01525;old_locus_tag=CCO56_01525 NZ_NPMB01000001.1 Protein Homology CDS 296740 297462 . - 0 ID=cds-WP_001258112.1;Parent=gene-CCO56_RS01525;Dbxref=GenBank:WP_001258112.1;Name=WP_001258112.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=CCO56_RS01525;product=fimbria biosynthesis regulator FimY;protein_id=WP_001258112.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 297481 297792 . - . ID=gene-CCO56_RS01530;Name=CCO56_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01530;old_locus_tag=CCO56_01530 NZ_NPMB01000001.1 Protein Homology CDS 297481 297792 . - 0 ID=cds-WP_023197011.1;Parent=gene-CCO56_RS01530;Dbxref=GenBank:WP_023197011.1;Name=WP_023197011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=CCO56_RS01530;product=hypothetical protein;protein_id=WP_023197011.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 297954 298550 . - . ID=gene-CCO56_RS01535;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=CCO56_RS01535;old_locus_tag=CCO56_01535 NZ_NPMB01000001.1 Protein Homology CDS 297954 298550 . - 0 ID=cds-WP_000948629.1;Parent=gene-CCO56_RS01535;Dbxref=GenBank:WP_000948629.1;Name=WP_000948629.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=CCO56_RS01535;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000948629.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 298805 298881 . + . ID=gene-CCO56_RS01545;Name=CCO56_RS01545;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS01545;old_locus_tag=CCO56_01545 NZ_NPMB01000001.1 tRNAscan-SE tRNA 298805 298881 . + . ID=rna-CCO56_RS01545;Parent=gene-CCO56_RS01545;anticodon=(pos:298839..298841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS01545;product=tRNA-Arg NZ_NPMB01000001.1 tRNAscan-SE exon 298805 298881 . + . ID=exon-CCO56_RS01545-1;Parent=rna-CCO56_RS01545;anticodon=(pos:298839..298841);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS01545;product=tRNA-Arg NZ_NPMB01000001.1 RefSeq pseudogene 299204 299302 . + . ID=gene-CCO56_RS01555;Name=CCO56_RS01555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS01555;old_locus_tag=CCO56_01555;partial=true;pseudo=true;start_range=.,299204 NZ_NPMB01000001.1 Protein Homology CDS 299204 299302 . + 0 ID=cds-CCO56_RS01555;Parent=gene-CCO56_RS01555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=CCO56_RS01555;partial=true;product=cation transporter;pseudo=true;start_range=.,299204;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 299353 300207 . - . ID=gene-CCO56_RS01560;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=CCO56_RS01560;old_locus_tag=CCO56_01560 NZ_NPMB01000001.1 Protein Homology CDS 299353 300207 . - 0 ID=cds-WP_080177249.1;Parent=gene-CCO56_RS01560;Dbxref=GenBank:WP_080177249.1;Name=WP_080177249.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=CCO56_RS01560;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_080177249.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 300423 301748 . + . ID=gene-CCO56_RS01565;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=CCO56_RS01565;old_locus_tag=CCO56_01565 NZ_NPMB01000001.1 Protein Homology CDS 300423 301748 . + 0 ID=cds-WP_000195929.1;Parent=gene-CCO56_RS01565;Dbxref=GenBank:WP_000195929.1;Name=WP_000195929.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=CCO56_RS01565;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_000195929.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 301905 302141 . + . ID=gene-CCO56_RS01575;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=CCO56_RS01575;old_locus_tag=CCO56_01575 NZ_NPMB01000001.1 Protein Homology CDS 301905 302141 . + 0 ID=cds-WP_000922170.1;Parent=gene-CCO56_RS01575;Dbxref=GenBank:WP_000922170.1;Name=WP_000922170.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=CCO56_RS01575;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922170.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 302154 302714 . + . ID=gene-CCO56_RS01580;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=CCO56_RS01580;old_locus_tag=CCO56_01580 NZ_NPMB01000001.1 Protein Homology CDS 302154 302714 . + 0 ID=cds-WP_000362177.1;Parent=gene-CCO56_RS01580;Dbxref=GenBank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=CCO56_RS01580;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362177.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 302786 303961 . - . ID=gene-CCO56_RS01585;Name=CCO56_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01585;old_locus_tag=CCO56_01585 NZ_NPMB01000001.1 Protein Homology CDS 302786 303961 . - 0 ID=cds-WP_023262745.1;Parent=gene-CCO56_RS01585;Dbxref=GenBank:WP_023262745.1;Name=WP_023262745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=CCO56_RS01585;product=DnaJ family molecular chaperone;protein_id=WP_023262745.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 304287 305681 . + . ID=gene-CCO56_RS01590;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=CCO56_RS01590;old_locus_tag=CCO56_01590 NZ_NPMB01000001.1 Protein Homology CDS 304287 305681 . + 0 ID=cds-WP_023262744.1;Parent=gene-CCO56_RS01590;Dbxref=GenBank:WP_023262744.1;Name=WP_023262744.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=CCO56_RS01590;product=phenylalanine transporter;protein_id=WP_023262744.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 305723 306970 . - . ID=gene-CCO56_RS01595;Name=CCO56_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01595;old_locus_tag=CCO56_01595 NZ_NPMB01000001.1 Protein Homology CDS 305723 306970 . - 0 ID=cds-WP_001156971.1;Parent=gene-CCO56_RS01595;Dbxref=GenBank:WP_001156971.1;Name=WP_001156971.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=CCO56_RS01595;product=mechanosensitive ion channel family protein;protein_id=WP_001156971.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 307281 309251 . + . ID=gene-CCO56_RS01605;Name=CCO56_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01605;old_locus_tag=CCO56_01605 NZ_NPMB01000001.1 Protein Homology CDS 307281 309251 . + 0 ID=cds-WP_079827212.1;Parent=gene-CCO56_RS01605;Dbxref=GenBank:WP_079827212.1;Name=WP_079827212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=CCO56_RS01605;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_079827212.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 309518 310171 . - . ID=gene-CCO56_RS01610;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=CCO56_RS01610;old_locus_tag=CCO56_01610 NZ_NPMB01000001.1 Protein Homology CDS 309518 310171 . - 0 ID=cds-WP_001529050.1;Parent=gene-CCO56_RS01610;Dbxref=GenBank:WP_001529050.1;Name=WP_001529050.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=CCO56_RS01610;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_001529050.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 310268 310636 . - . ID=gene-CCO56_RS01615;Name=CCO56_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01615;old_locus_tag=CCO56_01615 NZ_NPMB01000001.1 Protein Homology CDS 310268 310636 . - 0 ID=cds-WP_000348989.1;Parent=gene-CCO56_RS01615;Dbxref=GenBank:WP_000348989.1;Name=WP_000348989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=CCO56_RS01615;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348989.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 310636 311217 . - . ID=gene-CCO56_RS01620;Name=CCO56_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01620;old_locus_tag=CCO56_01620 NZ_NPMB01000001.1 Protein Homology CDS 310636 311217 . - 0 ID=cds-WP_000113609.1;Parent=gene-CCO56_RS01620;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=CCO56_RS01620;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 311506 311847 . + . ID=gene-CCO56_RS01625;Name=CCO56_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01625;old_locus_tag=CCO56_01625 NZ_NPMB01000001.1 Protein Homology CDS 311506 311847 . + 0 ID=cds-WP_000155633.1;Parent=gene-CCO56_RS01625;Dbxref=GenBank:WP_000155633.1;Name=WP_000155633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=CCO56_RS01625;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155633.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 311853 312101 . - . ID=gene-CCO56_RS01630;Name=CCO56_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01630;old_locus_tag=CCO56_01630 NZ_NPMB01000001.1 Protein Homology CDS 311853 312101 . - 0 ID=cds-WP_000682497.1;Parent=gene-CCO56_RS01630;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=CCO56_RS01630;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 312168 313286 . - . ID=gene-CCO56_RS01635;Name=CCO56_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01635;old_locus_tag=CCO56_01635 NZ_NPMB01000001.1 Protein Homology CDS 312168 313286 . - 0 ID=cds-WP_001196908.1;Parent=gene-CCO56_RS01635;Dbxref=GenBank:WP_001196908.1;Name=WP_001196908.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=CCO56_RS01635;product=YbdK family carboxylate-amine ligase;protein_id=WP_001196908.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 313298 314002 . - . ID=gene-CCO56_RS01640;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=CCO56_RS01640;old_locus_tag=CCO56_01640 NZ_NPMB01000001.1 Protein Homology CDS 313298 314002 . - 0 ID=cds-WP_079827213.1;Parent=gene-CCO56_RS01640;Dbxref=GenBank:WP_079827213.1;Name=WP_079827213.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=CCO56_RS01640;product=enterobactin synthase subunit EntD;protein_id=WP_079827213.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 314049 316304 . - . ID=gene-CCO56_RS01645;Name=CCO56_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01645;old_locus_tag=CCO56_01645 NZ_NPMB01000001.1 Protein Homology CDS 314049 316304 . - 0 ID=cds-WP_001034966.1;Parent=gene-CCO56_RS01645;Dbxref=GenBank:WP_001034966.1;Name=WP_001034966.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=CCO56_RS01645;product=TonB-dependent siderophore receptor;protein_id=WP_001034966.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 316493 317707 . + . ID=gene-CCO56_RS01650;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=CCO56_RS01650;old_locus_tag=CCO56_01650 NZ_NPMB01000001.1 Protein Homology CDS 316493 317707 . + 0 ID=cds-WP_080177274.1;Parent=gene-CCO56_RS01650;Dbxref=GenBank:WP_080177274.1;Name=WP_080177274.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=CCO56_RS01650;product=enterochelin esterase;protein_id=WP_080177274.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 317738 317956 . + . ID=gene-CCO56_RS01655;Name=CCO56_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01655;old_locus_tag=CCO56_01655 NZ_NPMB01000001.1 Protein Homology CDS 317738 317956 . + 0 ID=cds-WP_001529054.1;Parent=gene-CCO56_RS01655;Dbxref=GenBank:WP_001529054.1;Name=WP_001529054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=CCO56_RS01655;product=MbtH family protein;protein_id=WP_001529054.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 317953 321837 . + . ID=gene-CCO56_RS01660;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=CCO56_RS01660;old_locus_tag=CCO56_01660 NZ_NPMB01000001.1 Protein Homology CDS 317953 321837 . + 0 ID=cds-WP_080177275.1;Parent=gene-CCO56_RS01660;Dbxref=GenBank:WP_080177275.1;Name=WP_080177275.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=CCO56_RS01660;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_080177275.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 322087 323223 . + . ID=gene-CCO56_RS01665;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=CCO56_RS01665;old_locus_tag=CCO56_01665 NZ_NPMB01000001.1 Protein Homology CDS 322087 323223 . + 0 ID=cds-WP_001139571.1;Parent=gene-CCO56_RS01665;Dbxref=GenBank:WP_001139571.1;Name=WP_001139571.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=CCO56_RS01665;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_001139571.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 323277 324071 . - . ID=gene-CCO56_RS01670;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=CCO56_RS01670;old_locus_tag=CCO56_01670 NZ_NPMB01000001.1 Protein Homology CDS 323277 324071 . - 0 ID=cds-WP_000140622.1;Parent=gene-CCO56_RS01670;Dbxref=GenBank:WP_000140622.1;Name=WP_000140622.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=CCO56_RS01670;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140622.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 324068 325057 . - . ID=gene-CCO56_RS01675;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=CCO56_RS01675;old_locus_tag=CCO56_01675 NZ_NPMB01000001.1 Protein Homology CDS 324068 325057 . - 0 ID=cds-WP_000480064.1;Parent=gene-CCO56_RS01675;Dbxref=GenBank:WP_000480064.1;Name=WP_000480064.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=CCO56_RS01675;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480064.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 325057 326064 . - . ID=gene-CCO56_RS01680;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=CCO56_RS01680;old_locus_tag=CCO56_01680 NZ_NPMB01000001.1 Protein Homology CDS 325057 326064 . - 0 ID=cds-WP_001277869.1;Parent=gene-CCO56_RS01680;Dbxref=GenBank:WP_001277869.1;Name=WP_001277869.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=CCO56_RS01680;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277869.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 326174 327418 . + . ID=gene-CCO56_RS01685;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=CCO56_RS01685;old_locus_tag=CCO56_01685 NZ_NPMB01000001.1 Protein Homology CDS 326174 327418 . + 0 ID=cds-WP_001081661.1;Parent=gene-CCO56_RS01685;Dbxref=GenBank:WP_001081661.1;Name=WP_001081661.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=CCO56_RS01685;product=enterobactin transporter EntS;protein_id=WP_001081661.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 327481 328437 . - . ID=gene-CCO56_RS01690;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=CCO56_RS01690;old_locus_tag=CCO56_01690 NZ_NPMB01000001.1 Protein Homology CDS 327481 328437 . - 0 ID=cds-WP_001238995.1;Parent=gene-CCO56_RS01690;Dbxref=GenBank:WP_001238995.1;Name=WP_001238995.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=CCO56_RS01690;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001238995.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 328746 329921 . + . ID=gene-CCO56_RS01695;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=CCO56_RS01695;old_locus_tag=CCO56_01695 NZ_NPMB01000001.1 Protein Homology CDS 328746 329921 . + 0 ID=cds-WP_000367597.1;Parent=gene-CCO56_RS01695;Dbxref=GenBank:WP_000367597.1;Name=WP_000367597.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=CCO56_RS01695;product=isochorismate synthase EntC;protein_id=WP_000367597.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 329931 331541 . + . ID=gene-CCO56_RS01700;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=CCO56_RS01700;old_locus_tag=CCO56_01700 NZ_NPMB01000001.1 Protein Homology CDS 329931 331541 . + 0 ID=cds-WP_058343971.1;Parent=gene-CCO56_RS01700;Dbxref=GenBank:WP_058343971.1;Name=WP_058343971.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=CCO56_RS01700;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_058343971.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 331555 332412 . + . ID=gene-CCO56_RS01705;Name=CCO56_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01705;old_locus_tag=CCO56_01705 NZ_NPMB01000001.1 Protein Homology CDS 331555 332412 . + 0 ID=cds-WP_001007166.1;Parent=gene-CCO56_RS01705;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=CCO56_RS01705;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 332412 333167 . + . ID=gene-CCO56_RS01710;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=CCO56_RS01710;old_locus_tag=CCO56_01710 NZ_NPMB01000001.1 Protein Homology CDS 332412 333167 . + 0 ID=cds-WP_058343970.1;Parent=gene-CCO56_RS01710;Dbxref=GenBank:WP_058343970.1;Name=WP_058343970.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=CCO56_RS01710;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_058343970.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 333170 333583 . + . ID=gene-CCO56_RS01715;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=CCO56_RS01715;old_locus_tag=CCO56_01715 NZ_NPMB01000001.1 Protein Homology CDS 333170 333583 . + 0 ID=cds-WP_000637966.1;Parent=gene-CCO56_RS01715;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=CCO56_RS01715;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 333765 335870 . + . ID=gene-CCO56_RS01720;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=CCO56_RS01720;old_locus_tag=CCO56_01720 NZ_NPMB01000001.1 Protein Homology CDS 333765 335870 . + 0 ID=cds-WP_001043108.1;Parent=gene-CCO56_RS01720;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=CCO56_RS01720;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 335934 336131 . + . ID=gene-CCO56_RS01725;Name=CCO56_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01725;old_locus_tag=CCO56_01725 NZ_NPMB01000001.1 Protein Homology CDS 335934 336131 . + 0 ID=cds-WP_000460619.1;Parent=gene-CCO56_RS01725;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=CCO56_RS01725;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 336167 337255 . - . ID=gene-CCO56_RS01730;Name=CCO56_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01730;old_locus_tag=CCO56_01730 NZ_NPMB01000001.1 Protein Homology CDS 336167 337255 . - 0 ID=cds-WP_058343969.1;Parent=gene-CCO56_RS01730;Dbxref=GenBank:WP_058343969.1;Name=WP_058343969.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=CCO56_RS01730;product=oxidoreductase;protein_id=WP_058343969.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 337382 338542 . + . ID=gene-CCO56_RS01735;Name=CCO56_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01735;old_locus_tag=CCO56_01735 NZ_NPMB01000001.1 Protein Homology CDS 337382 338542 . + 0 ID=cds-WP_058343968.1;Parent=gene-CCO56_RS01735;Dbxref=GenBank:WP_058343968.1;Name=WP_058343968.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=CCO56_RS01735;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_058343968.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 338543 339160 . - . ID=gene-CCO56_RS01740;Name=CCO56_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01740;old_locus_tag=CCO56_01740 NZ_NPMB01000001.1 Protein Homology CDS 338543 339160 . - 0 ID=cds-WP_001164752.1;Parent=gene-CCO56_RS01740;Dbxref=GenBank:WP_001164752.1;Name=WP_001164752.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=CCO56_RS01740;product=IbrB-like domain-containing protein;protein_id=WP_001164752.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 339133 340368 . - . ID=gene-CCO56_RS01745;Name=CCO56_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01745;old_locus_tag=CCO56_01745 NZ_NPMB01000001.1 Protein Homology CDS 339133 340368 . - 0 ID=cds-WP_000118134.1;Parent=gene-CCO56_RS01745;Dbxref=GenBank:WP_000118134.1;Name=WP_000118134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=CCO56_RS01745;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118134.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 340531 341436 . - . ID=gene-CCO56_RS01750;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;locus_tag=CCO56_RS01750;old_locus_tag=CCO56_01750 NZ_NPMB01000001.1 Protein Homology CDS 340531 341436 . - 0 ID=cds-WP_000002494.1;Parent=gene-CCO56_RS01750;Dbxref=GenBank:WP_000002494.1;Name=WP_000002494.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002494.1;locus_tag=CCO56_RS01750;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002494.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 341753 342499 . - . ID=gene-CCO56_RS01760;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=CCO56_RS01760;old_locus_tag=CCO56_01760 NZ_NPMB01000001.1 Protein Homology CDS 341753 342499 . - 0 ID=cds-WP_000597129.1;Parent=gene-CCO56_RS01760;Dbxref=GenBank:WP_000597129.1;Name=WP_000597129.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=CCO56_RS01760;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597129.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 342940 343503 . + . ID=gene-CCO56_RS01765;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CCO56_RS01765;old_locus_tag=CCO56_01765 NZ_NPMB01000001.1 Protein Homology CDS 342940 343503 . + 0 ID=cds-WP_000052802.1;Parent=gene-CCO56_RS01765;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=CCO56_RS01765;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 343745 345310 . + . ID=gene-CCO56_RS01770;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CCO56_RS01770;old_locus_tag=CCO56_01770 NZ_NPMB01000001.1 Protein Homology CDS 343745 345310 . + 0 ID=cds-WP_023220093.1;Parent=gene-CCO56_RS01770;Dbxref=GenBank:WP_023220093.1;Name=WP_023220093.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=CCO56_RS01770;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_023220093.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 345643 346203 . + . ID=gene-CCO56_RS01775;Name=CCO56_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01775;old_locus_tag=CCO56_01775 NZ_NPMB01000001.1 Protein Homology CDS 345643 346203 . + 0 ID=cds-WP_000377437.1;Parent=gene-CCO56_RS01775;Dbxref=GenBank:WP_000377437.1;Name=WP_000377437.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=CCO56_RS01775;product=TorD/DmsD family molecular chaperone;protein_id=WP_000377437.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 346196 348475 . + . ID=gene-CCO56_RS01780;Name=CCO56_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01780;old_locus_tag=CCO56_01780 NZ_NPMB01000001.1 Protein Homology CDS 346196 348475 . + 0 ID=cds-WP_080177277.1;Parent=gene-CCO56_RS01780;Dbxref=GenBank:WP_080177277.1;Name=WP_080177277.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=CCO56_RS01780;product=molybdopterin-dependent oxidoreductase;protein_id=WP_080177277.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 348472 349029 . + . ID=gene-CCO56_RS01785;Name=CCO56_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01785;old_locus_tag=CCO56_01785 NZ_NPMB01000001.1 Protein Homology CDS 348472 349029 . + 0 ID=cds-WP_076165812.1;Parent=gene-CCO56_RS01785;Dbxref=GenBank:WP_076165812.1;Name=WP_076165812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=CCO56_RS01785;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_076165812.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 349029 349796 . + . ID=gene-CCO56_RS01790;Name=CCO56_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01790;old_locus_tag=CCO56_01790 NZ_NPMB01000001.1 Protein Homology CDS 349029 349796 . + 0 ID=cds-WP_000417106.1;Parent=gene-CCO56_RS01790;Dbxref=GenBank:WP_000417106.1;Name=WP_000417106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=CCO56_RS01790;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417106.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 349864 350292 . - . ID=gene-CCO56_RS01795;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=CCO56_RS01795;old_locus_tag=CCO56_01795 NZ_NPMB01000001.1 Protein Homology CDS 349864 350292 . - 0 ID=cds-WP_000278499.1;Parent=gene-CCO56_RS01795;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=CCO56_RS01795;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 350515 351753 . + . ID=gene-CCO56_RS01800;Name=CCO56_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01800;old_locus_tag=CCO56_01800 NZ_NPMB01000001.1 Protein Homology CDS 350515 351753 . + 0 ID=cds-WP_000646115.1;Parent=gene-CCO56_RS01800;Dbxref=GenBank:WP_000646115.1;Name=WP_000646115.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=CCO56_RS01800;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646115.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 351838 352248 . - . ID=gene-CCO56_RS01805;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=CCO56_RS01805;old_locus_tag=CCO56_01805 NZ_NPMB01000001.1 Protein Homology CDS 351838 352248 . - 0 ID=cds-WP_000089748.1;Parent=gene-CCO56_RS01805;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=CCO56_RS01805;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 352483 353289 . - . ID=gene-CCO56_RS01815;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=CCO56_RS01815;old_locus_tag=CCO56_01815 NZ_NPMB01000001.1 Protein Homology CDS 352483 353289 . - 0 ID=cds-WP_001632824.1;Parent=gene-CCO56_RS01815;Dbxref=GenBank:WP_001632824.1;Name=WP_001632824.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=CCO56_RS01815;product=ribonuclease I;protein_id=WP_001632824.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 353399 354862 . - . ID=gene-CCO56_RS01820;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=CCO56_RS01820;old_locus_tag=CCO56_01820 NZ_NPMB01000001.1 Protein Homology CDS 353399 354862 . - 0 ID=cds-WP_000059039.1;Parent=gene-CCO56_RS01820;Dbxref=GenBank:WP_000059039.1;Name=WP_000059039.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=CCO56_RS01820;product=citrate/succinate antiporter CitT;protein_id=WP_000059039.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 354900 355796 . - . ID=gene-CCO56_RS01825;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO56_RS01825;old_locus_tag=CCO56_01825 NZ_NPMB01000001.1 Protein Homology CDS 354900 355796 . - 0 ID=cds-WP_000982668.1;Parent=gene-CCO56_RS01825;Dbxref=GenBank:WP_000982668.1;Name=WP_000982668.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=CCO56_RS01825;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982668.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 355768 356319 . - . ID=gene-CCO56_RS01830;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO56_RS01830;old_locus_tag=CCO56_01830 NZ_NPMB01000001.1 Protein Homology CDS 355768 356319 . - 0 ID=cds-WP_001238275.1;Parent=gene-CCO56_RS01830;Dbxref=GenBank:WP_001238275.1;Name=WP_001238275.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=CCO56_RS01830;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_001238275.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 356323 357852 . - . ID=gene-CCO56_RS01835;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO56_RS01835;old_locus_tag=CCO56_01835 NZ_NPMB01000001.1 Protein Homology CDS 356323 357852 . - 0 ID=cds-WP_000192323.1;Parent=gene-CCO56_RS01835;Dbxref=GenBank:WP_000192323.1;Name=WP_000192323.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=CCO56_RS01835;product=citrate lyase subunit alpha;protein_id=WP_000192323.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 357862 358770 . - . ID=gene-CCO56_RS01840;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO56_RS01840;old_locus_tag=CCO56_01840 NZ_NPMB01000001.1 Protein Homology CDS 357862 358770 . - 0 ID=cds-WP_000622342.1;Parent=gene-CCO56_RS01840;Dbxref=GenBank:WP_000622342.1;Name=WP_000622342.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=CCO56_RS01840;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622342.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 358767 359063 . - . ID=gene-CCO56_RS01845;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO56_RS01845;old_locus_tag=CCO56_01845 NZ_NPMB01000001.1 Protein Homology CDS 358767 359063 . - 0 ID=cds-WP_000700685.1;Parent=gene-CCO56_RS01845;Dbxref=GenBank:WP_000700685.1;Name=WP_000700685.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=CCO56_RS01845;product=citrate lyase acyl carrier protein;protein_id=WP_000700685.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 359060 360136 . - . ID=gene-CCO56_RS01850;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO56_RS01850;old_locus_tag=CCO56_01850 NZ_NPMB01000001.1 Protein Homology CDS 359060 360136 . - 0 ID=cds-WP_000467874.1;Parent=gene-CCO56_RS01850;Dbxref=GenBank:WP_000467874.1;Name=WP_000467874.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=CCO56_RS01850;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467874.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 360522 362183 . + . ID=gene-CCO56_RS01860;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=CCO56_RS01860;old_locus_tag=CCO56_01860 NZ_NPMB01000001.1 Protein Homology CDS 360522 362183 . + 0 ID=cds-WP_080177214.1;Parent=gene-CCO56_RS01860;Dbxref=GenBank:WP_080177214.1;Name=WP_080177214.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=CCO56_RS01860;product=sensor histidine kinase DpiB;protein_id=WP_080177214.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 362152 362832 . + . ID=gene-CCO56_RS01865;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=CCO56_RS01865;old_locus_tag=CCO56_01865 NZ_NPMB01000001.1 Protein Homology CDS 362152 362832 . + 0 ID=cds-WP_000138778.1;Parent=gene-CCO56_RS01865;Dbxref=GenBank:WP_000138778.1;Name=WP_000138778.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=CCO56_RS01865;product=two-component response regulator DpiA;protein_id=WP_000138778.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 362886 364271 . - . ID=gene-CCO56_RS01870;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=CCO56_RS01870;old_locus_tag=CCO56_01870 NZ_NPMB01000001.1 Protein Homology CDS 362886 364271 . - 0 ID=cds-WP_000958619.1;Parent=gene-CCO56_RS01870;Dbxref=GenBank:WP_000958619.1;Name=WP_000958619.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=CCO56_RS01870;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000958619.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 364650 365222 . + . ID=gene-CCO56_RS01880;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=CCO56_RS01880;old_locus_tag=CCO56_01880 NZ_NPMB01000001.1 Protein Homology CDS 364650 365222 . + 0 ID=cds-WP_001623090.1;Parent=gene-CCO56_RS01880;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=CCO56_RS01880;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 365410 365619 . + . ID=gene-CCO56_RS01885;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO56_RS01885;old_locus_tag=CCO56_01885 NZ_NPMB01000001.1 Protein Homology CDS 365410 365619 . + 0 ID=cds-WP_000034826.1;Parent=gene-CCO56_RS01885;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=CCO56_RS01885;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 365679 366062 . - . ID=gene-CCO56_RS01890;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CCO56_RS01890;old_locus_tag=CCO56_01890 NZ_NPMB01000001.1 Protein Homology CDS 365679 366062 . - 0 ID=cds-WP_000939753.1;Parent=gene-CCO56_RS01890;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=CCO56_RS01890;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 366153 366941 . + . ID=gene-CCO56_RS01895;Name=CCO56_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01895;old_locus_tag=CCO56_01895 NZ_NPMB01000001.1 Protein Homology CDS 366153 366941 . + 0 ID=cds-WP_000495793.1;Parent=gene-CCO56_RS01895;Dbxref=GenBank:WP_000495793.1;Name=WP_000495793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=CCO56_RS01895;product=deaminated glutathione amidase;protein_id=WP_000495793.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 367070 367273 . + . ID=gene-CCO56_RS01900;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=CCO56_RS01900;old_locus_tag=CCO56_01900 NZ_NPMB01000001.1 Protein Homology CDS 367070 367273 . + 0 ID=cds-WP_000503938.1;Parent=gene-CCO56_RS01900;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=CCO56_RS01900;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 367359 368324 . - . ID=gene-CCO56_RS01905;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CCO56_RS01905;old_locus_tag=CCO56_01905 NZ_NPMB01000001.1 Protein Homology CDS 367359 368324 . - 0 ID=cds-WP_000042640.1;Parent=gene-CCO56_RS01905;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=CCO56_RS01905;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 368530 369483 . - . ID=gene-CCO56_RS01910;Name=CCO56_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01910;old_locus_tag=CCO56_01910 NZ_NPMB01000001.1 Protein Homology CDS 368530 369483 . - 0 ID=cds-WP_001282817.1;Parent=gene-CCO56_RS01910;Dbxref=GenBank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=CCO56_RS01910;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 369785 370426 . - . ID=gene-CCO56_RS01915;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=CCO56_RS01915;old_locus_tag=CCO56_01915 NZ_NPMB01000001.1 Protein Homology CDS 369785 370426 . - 0 ID=cds-WP_000284011.1;Parent=gene-CCO56_RS01915;Dbxref=GenBank:WP_000284011.1;Name=WP_000284011.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=CCO56_RS01915;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284011.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 370526 370789 . - . ID=gene-CCO56_RS01920;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=CCO56_RS01920;old_locus_tag=CCO56_01920 NZ_NPMB01000001.1 Protein Homology CDS 370526 370789 . - 0 ID=cds-WP_000850547.1;Parent=gene-CCO56_RS01920;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=CCO56_RS01920;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 370898 372109 . - . ID=gene-CCO56_RS01925;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=CCO56_RS01925;old_locus_tag=CCO56_01925 NZ_NPMB01000001.1 Protein Homology CDS 370898 372109 . - 0 ID=cds-WP_000858711.1;Parent=gene-CCO56_RS01925;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=CCO56_RS01925;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 372249 373382 . - . ID=gene-CCO56_RS01930;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=CCO56_RS01930;old_locus_tag=CCO56_01930 NZ_NPMB01000001.1 Protein Homology CDS 372249 373382 . - 0 ID=cds-WP_001529015.1;Parent=gene-CCO56_RS01930;Dbxref=GenBank:WP_001529015.1;Name=WP_001529015.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=CCO56_RS01930;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001529015.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 373393 374505 . - . ID=gene-CCO56_RS01935;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=CCO56_RS01935;old_locus_tag=CCO56_01935 NZ_NPMB01000001.1 Protein Homology CDS 373393 374505 . - 0 ID=cds-WP_000131713.1;Parent=gene-CCO56_RS01935;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=CCO56_RS01935;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 374508 376409 . - . ID=gene-CCO56_RS01940;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO56_RS01940;old_locus_tag=CCO56_01940 NZ_NPMB01000001.1 Protein Homology CDS 374508 376409 . - 0 ID=cds-WP_000828700.1;Parent=gene-CCO56_RS01940;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=CCO56_RS01940;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 376440 376907 . - . ID=gene-CCO56_RS01945;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CCO56_RS01945;old_locus_tag=CCO56_01945 NZ_NPMB01000001.1 Protein Homology CDS 376440 376907 . - 0 ID=cds-WP_000776107.1;Parent=gene-CCO56_RS01945;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=CCO56_RS01945;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 376911 377228 . - . ID=gene-CCO56_RS01950;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CCO56_RS01950;old_locus_tag=CCO56_01950 NZ_NPMB01000001.1 Protein Homology CDS 376911 377228 . - 0 ID=cds-WP_001161670.1;Parent=gene-CCO56_RS01950;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=CCO56_RS01950;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 377557 378165 . - . ID=gene-CCO56_RS01955;Name=CCO56_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01955;old_locus_tag=CCO56_01955 NZ_NPMB01000001.1 Protein Homology CDS 377557 378165 . - 0 ID=cds-WP_001241922.1;Parent=gene-CCO56_RS01955;Dbxref=GenBank:WP_001241922.1;Name=WP_001241922.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=CCO56_RS01955;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241922.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 378262 379356 . + . ID=gene-CCO56_RS01960;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CCO56_RS01960;old_locus_tag=CCO56_01960 NZ_NPMB01000001.1 Protein Homology CDS 378262 379356 . + 0 ID=cds-WP_076165815.1;Parent=gene-CCO56_RS01960;Dbxref=GenBank:WP_076165815.1;Name=WP_076165815.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=CCO56_RS01960;product=threonine-phosphate decarboxylase CobD;protein_id=WP_076165815.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 379331 379972 . - . ID=gene-CCO56_RS01965;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CCO56_RS01965;old_locus_tag=CCO56_01965 NZ_NPMB01000001.1 Protein Homology CDS 379331 379972 . - 0 ID=cds-WP_023972009.1;Parent=gene-CCO56_RS01965;Dbxref=GenBank:WP_023972009.1;Name=WP_023972009.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=CCO56_RS01965;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_023972009.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 379974 381005 . - . ID=gene-CCO56_RS01970;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CCO56_RS01970;old_locus_tag=CCO56_01970 NZ_NPMB01000001.1 Protein Homology CDS 379974 381005 . - 0 ID=cds-WP_069720931.1;Parent=gene-CCO56_RS01970;Dbxref=GenBank:WP_069720931.1;Name=WP_069720931.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=CCO56_RS01970;product=DNA polymerase III subunit delta;protein_id=WP_069720931.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 381005 381595 . - . ID=gene-CCO56_RS01975;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=CCO56_RS01975;old_locus_tag=CCO56_01975 NZ_NPMB01000001.1 Protein Homology CDS 381005 381595 . - 0 ID=cds-WP_001269950.1;Parent=gene-CCO56_RS01975;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=CCO56_RS01975;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 381610 384192 . - . ID=gene-CCO56_RS01980;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CCO56_RS01980;old_locus_tag=CCO56_01980 NZ_NPMB01000001.1 Protein Homology CDS 381610 384192 . - 0 ID=cds-WP_001157912.1;Parent=gene-CCO56_RS01980;Dbxref=GenBank:WP_001157912.1;Name=WP_001157912.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=CCO56_RS01980;product=leucine--tRNA ligase;protein_id=WP_001157912.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 384429 384770 . + . ID=gene-CCO56_RS01985;Name=CCO56_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01985;old_locus_tag=CCO56_01985 NZ_NPMB01000001.1 Protein Homology CDS 384429 384770 . + 0 ID=cds-WP_001574029.1;Parent=gene-CCO56_RS01985;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=CCO56_RS01985;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 384787 385959 . + . ID=gene-CCO56_RS01990;Name=CCO56_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01990;old_locus_tag=CCO56_01990 NZ_NPMB01000001.1 Protein Homology CDS 384787 385959 . + 0 ID=cds-WP_001670689.1;Parent=gene-CCO56_RS01990;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=CCO56_RS01990;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 386009 386962 . + . ID=gene-CCO56_RS01995;Name=CCO56_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS01995;old_locus_tag=CCO56_01995 NZ_NPMB01000001.1 Protein Homology CDS 386009 386962 . + 0 ID=cds-WP_000694477.1;Parent=gene-CCO56_RS01995;Dbxref=GenBank:WP_000694477.1;Name=WP_000694477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=CCO56_RS01995;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694477.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 387030 388958 . + . ID=gene-CCO56_RS02000;Name=CCO56_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02000;old_locus_tag=CCO56_02000 NZ_NPMB01000001.1 Protein Homology CDS 387030 388958 . + 0 ID=cds-WP_023208130.1;Parent=gene-CCO56_RS02000;Dbxref=GenBank:WP_023208130.1;Name=WP_023208130.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=CCO56_RS02000;product=sigma-54 interaction domain-containing protein;protein_id=WP_023208130.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 389051 389524 . + . ID=gene-CCO56_RS02005;Name=CCO56_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02005;old_locus_tag=CCO56_02005 NZ_NPMB01000001.1 Protein Homology CDS 389051 389524 . + 0 ID=cds-WP_001044886.1;Parent=gene-CCO56_RS02005;Dbxref=GenBank:WP_001044886.1;Name=WP_001044886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=CCO56_RS02005;product=zinc ribbon-containing protein;protein_id=WP_001044886.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 389610 390545 . - . ID=gene-CCO56_RS02010;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=CCO56_RS02010;old_locus_tag=CCO56_02010 NZ_NPMB01000001.1 Protein Homology CDS 389610 390545 . - 0 ID=cds-WP_001207431.1;Parent=gene-CCO56_RS02010;Dbxref=GenBank:WP_001207431.1;Name=WP_001207431.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=CCO56_RS02010;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207431.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 390662 391387 . - . ID=gene-CCO56_RS02015;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=CCO56_RS02015;old_locus_tag=CCO56_02015 NZ_NPMB01000001.1 Protein Homology CDS 390662 391387 . - 0 ID=cds-WP_000631369.1;Parent=gene-CCO56_RS02015;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=CCO56_RS02015;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 391387 392061 . - . ID=gene-CCO56_RS02020;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=CCO56_RS02020;old_locus_tag=CCO56_02020 NZ_NPMB01000001.1 Protein Homology CDS 391387 392061 . - 0 ID=cds-WP_000272799.1;Parent=gene-CCO56_RS02020;Dbxref=GenBank:WP_000272799.1;Name=WP_000272799.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=CCO56_RS02020;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272799.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 392061 392801 . - . ID=gene-CCO56_RS02025;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=CCO56_RS02025;old_locus_tag=CCO56_02025 NZ_NPMB01000001.1 Protein Homology CDS 392061 392801 . - 0 ID=cds-WP_000020930.1;Parent=gene-CCO56_RS02025;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=CCO56_RS02025;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 392961 393869 . - . ID=gene-CCO56_RS02030;Name=CCO56_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02030;old_locus_tag=CCO56_02030 NZ_NPMB01000001.1 Protein Homology CDS 392961 393869 . - 0 ID=cds-WP_001518176.1;Parent=gene-CCO56_RS02030;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=CCO56_RS02030;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 394224 395762 . - . ID=gene-CCO56_RS02040;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=CCO56_RS02040;old_locus_tag=CCO56_02040 NZ_NPMB01000001.1 Protein Homology CDS 394224 395762 . - 0 ID=cds-WP_001543572.1;Parent=gene-CCO56_RS02040;Dbxref=GenBank:WP_001543572.1;Name=WP_001543572.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=CCO56_RS02040;product=apolipoprotein N-acyltransferase;protein_id=WP_001543572.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 395782 396660 . - . ID=gene-CCO56_RS02045;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=CCO56_RS02045;old_locus_tag=CCO56_02045 NZ_NPMB01000001.1 Protein Homology CDS 395782 396660 . - 0 ID=cds-WP_001278615.1;Parent=gene-CCO56_RS02045;Dbxref=GenBank:WP_001278615.1;Name=WP_001278615.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=CCO56_RS02045;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 396818 397291 . - . ID=gene-CCO56_RS02050;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CCO56_RS02050;old_locus_tag=CCO56_02050 NZ_NPMB01000001.1 Protein Homology CDS 396818 397291 . - 0 ID=cds-WP_000084477.1;Parent=gene-CCO56_RS02050;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=CCO56_RS02050;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 397288 398334 . - . ID=gene-CCO56_RS02055;Name=CCO56_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02055;old_locus_tag=CCO56_02055 NZ_NPMB01000001.1 Protein Homology CDS 397288 398334 . - 0 ID=cds-WP_001018045.1;Parent=gene-CCO56_RS02055;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=CCO56_RS02055;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 398539 399963 . - . ID=gene-CCO56_RS02060;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CCO56_RS02060;old_locus_tag=CCO56_02060 NZ_NPMB01000001.1 Protein Homology CDS 398539 399963 . - 0 ID=cds-WP_001519200.1;Parent=gene-CCO56_RS02060;Dbxref=GenBank:WP_001519200.1;Name=WP_001519200.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=CCO56_RS02060;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001519200.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 400107 401282 . + . ID=gene-CCO56_RS02065;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=CCO56_RS02065;old_locus_tag=CCO56_02065 NZ_NPMB01000001.1 Protein Homology CDS 400107 401282 . + 0 ID=cds-WP_000184627.1;Parent=gene-CCO56_RS02065;Dbxref=GenBank:WP_000184627.1;Name=WP_000184627.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=CCO56_RS02065;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184627.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 401415 401489 . - . ID=gene-CCO56_RS02070;Name=CCO56_RS02070;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02070;old_locus_tag=CCO56_02070 NZ_NPMB01000001.1 tRNAscan-SE tRNA 401415 401489 . - . ID=rna-CCO56_RS02070;Parent=gene-CCO56_RS02070;anticodon=(pos:complement(401455..401457));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02070;product=tRNA-Gln NZ_NPMB01000001.1 tRNAscan-SE exon 401415 401489 . - . ID=exon-CCO56_RS02070-1;Parent=rna-CCO56_RS02070;anticodon=(pos:complement(401455..401457));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02070;product=tRNA-Gln NZ_NPMB01000001.1 RefSeq gene 401533 401607 . - . ID=gene-CCO56_RS02075;Name=CCO56_RS02075;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02075;old_locus_tag=CCO56_02075 NZ_NPMB01000001.1 tRNAscan-SE tRNA 401533 401607 . - . ID=rna-CCO56_RS02075;Parent=gene-CCO56_RS02075;anticodon=(pos:complement(401573..401575));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02075;product=tRNA-Gln NZ_NPMB01000001.1 tRNAscan-SE exon 401533 401607 . - . ID=exon-CCO56_RS02075-1;Parent=rna-CCO56_RS02075;anticodon=(pos:complement(401573..401575));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02075;product=tRNA-Gln NZ_NPMB01000001.1 RefSeq gene 401654 401730 . - . ID=gene-CCO56_RS02080;Name=CCO56_RS02080;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02080;old_locus_tag=CCO56_02080 NZ_NPMB01000001.1 tRNAscan-SE tRNA 401654 401730 . - . ID=rna-CCO56_RS02080;Parent=gene-CCO56_RS02080;anticodon=(pos:complement(401694..401696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02080;product=tRNA-Met NZ_NPMB01000001.1 tRNAscan-SE exon 401654 401730 . - . ID=exon-CCO56_RS02080-1;Parent=rna-CCO56_RS02080;anticodon=(pos:complement(401694..401696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02080;product=tRNA-Met NZ_NPMB01000001.1 RefSeq gene 401746 401820 . - . ID=gene-CCO56_RS02085;Name=CCO56_RS02085;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02085;old_locus_tag=CCO56_02085 NZ_NPMB01000001.1 tRNAscan-SE tRNA 401746 401820 . - . ID=rna-CCO56_RS02085;Parent=gene-CCO56_RS02085;anticodon=(pos:complement(401786..401788));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02085;product=tRNA-Gln NZ_NPMB01000001.1 tRNAscan-SE exon 401746 401820 . - . ID=exon-CCO56_RS02085-1;Parent=rna-CCO56_RS02085;anticodon=(pos:complement(401786..401788));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02085;product=tRNA-Gln NZ_NPMB01000001.1 RefSeq gene 401856 401930 . - . ID=gene-CCO56_RS02090;Name=CCO56_RS02090;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02090;old_locus_tag=CCO56_02090 NZ_NPMB01000001.1 tRNAscan-SE tRNA 401856 401930 . - . ID=rna-CCO56_RS02090;Parent=gene-CCO56_RS02090;anticodon=(pos:complement(401896..401898));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02090;product=tRNA-Gln NZ_NPMB01000001.1 tRNAscan-SE exon 401856 401930 . - . ID=exon-CCO56_RS02090-1;Parent=rna-CCO56_RS02090;anticodon=(pos:complement(401896..401898));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02090;product=tRNA-Gln NZ_NPMB01000001.1 RefSeq gene 401954 402038 . - . ID=gene-CCO56_RS02095;Name=CCO56_RS02095;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02095;old_locus_tag=CCO56_02095 NZ_NPMB01000001.1 tRNAscan-SE tRNA 401954 402038 . - . ID=rna-CCO56_RS02095;Parent=gene-CCO56_RS02095;anticodon=(pos:complement(402002..402004));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02095;product=tRNA-Leu NZ_NPMB01000001.1 tRNAscan-SE exon 401954 402038 . - . ID=exon-CCO56_RS02095-1;Parent=rna-CCO56_RS02095;anticodon=(pos:complement(402002..402004));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02095;product=tRNA-Leu NZ_NPMB01000001.1 RefSeq gene 402047 402123 . - . ID=gene-CCO56_RS02100;Name=CCO56_RS02100;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02100;old_locus_tag=CCO56_02100 NZ_NPMB01000001.1 tRNAscan-SE tRNA 402047 402123 . - . ID=rna-CCO56_RS02100;Parent=gene-CCO56_RS02100;anticodon=(pos:complement(402087..402089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02100;product=tRNA-Met NZ_NPMB01000001.1 tRNAscan-SE exon 402047 402123 . - . ID=exon-CCO56_RS02100-1;Parent=rna-CCO56_RS02100;anticodon=(pos:complement(402087..402089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02100;product=tRNA-Met NZ_NPMB01000001.1 RefSeq gene 402345 404009 . - . ID=gene-CCO56_RS02105;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=CCO56_RS02105;old_locus_tag=CCO56_02105 NZ_NPMB01000001.1 Protein Homology CDS 402345 404009 . - 0 ID=cds-WP_000337032.1;Parent=gene-CCO56_RS02105;Dbxref=GenBank:WP_000337032.1;Name=WP_000337032.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=CCO56_RS02105;product=asparagine synthase B;protein_id=WP_000337032.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 404299 405051 . - . ID=gene-CCO56_RS02115;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=CCO56_RS02115;old_locus_tag=CCO56_02115 NZ_NPMB01000001.1 Protein Homology CDS 404299 405051 . - 0 ID=cds-WP_000153143.1;Parent=gene-CCO56_RS02115;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=CCO56_RS02115;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 405098 406318 . - . ID=gene-CCO56_RS02120;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=CCO56_RS02120;old_locus_tag=CCO56_02120 NZ_NPMB01000001.1 Protein Homology CDS 405098 406318 . - 0 ID=cds-WP_000187579.1;Parent=gene-CCO56_RS02120;Dbxref=GenBank:WP_000187579.1;Name=WP_000187579.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=CCO56_RS02120;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187579.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 406323 407477 . - . ID=gene-CCO56_RS02125;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CCO56_RS02125;old_locus_tag=CCO56_02125 NZ_NPMB01000001.1 Protein Homology CDS 406323 407477 . - 0 ID=cds-WP_079822224.1;Parent=gene-CCO56_RS02125;Dbxref=GenBank:WP_079822224.1;Name=WP_079822224.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=CCO56_RS02125;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_079822224.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 407537 408337 . - . ID=gene-CCO56_RS02130;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CCO56_RS02130;old_locus_tag=CCO56_02130 NZ_NPMB01000001.1 Protein Homology CDS 407537 408337 . - 0 ID=cds-WP_001237059.1;Parent=gene-CCO56_RS02130;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=CCO56_RS02130;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 408664 410616 . + . ID=gene-CCO56_RS02135;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=CCO56_RS02135;old_locus_tag=CCO56_02135 NZ_NPMB01000001.1 Protein Homology CDS 408664 410616 . + 0 ID=cds-WP_001023069.1;Parent=gene-CCO56_RS02135;Dbxref=GenBank:WP_001023069.1;Name=WP_001023069.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=CCO56_RS02135;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023069.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 410827 412494 . + . ID=gene-CCO56_RS02140;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=CCO56_RS02140;old_locus_tag=CCO56_02140 NZ_NPMB01000001.1 Protein Homology CDS 410827 412494 . + 0 ID=cds-WP_001287181.1;Parent=gene-CCO56_RS02140;Dbxref=GenBank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=CCO56_RS02140;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 413094 414500 . + . ID=gene-CCO56_RS02150;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=CCO56_RS02150;old_locus_tag=CCO56_02150 NZ_NPMB01000001.1 Protein Homology CDS 413094 414500 . + 0 ID=cds-WP_001258803.1;Parent=gene-CCO56_RS02150;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=CCO56_RS02150;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 414550 414882 . + . ID=gene-CCO56_RS02155;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=CCO56_RS02155;old_locus_tag=CCO56_02155 NZ_NPMB01000001.1 Protein Homology CDS 414550 414882 . + 0 ID=cds-WP_000722260.1;Parent=gene-CCO56_RS02155;Dbxref=GenBank:WP_000722260.1;Name=WP_000722260.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=CCO56_RS02155;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722260.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 414931 416235 . - . ID=gene-CCO56_RS02160;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=CCO56_RS02160;old_locus_tag=CCO56_02160 NZ_NPMB01000001.1 Protein Homology CDS 414931 416235 . - 0 ID=cds-WP_000057014.1;Parent=gene-CCO56_RS02160;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=CCO56_RS02160;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 416286 417425 . - . ID=gene-CCO56_RS02165;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=CCO56_RS02165;old_locus_tag=CCO56_02165 NZ_NPMB01000001.1 Protein Homology CDS 416286 417425 . - 0 ID=cds-WP_000811137.1;Parent=gene-CCO56_RS02165;Dbxref=GenBank:WP_000811137.1;Name=WP_000811137.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=CCO56_RS02165;product=tricarballylate utilization protein TcuB;protein_id=WP_000811137.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 417412 418815 . - . ID=gene-CCO56_RS02170;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=CCO56_RS02170;old_locus_tag=CCO56_02170 NZ_NPMB01000001.1 Protein Homology CDS 417412 418815 . - 0 ID=cds-WP_000228705.1;Parent=gene-CCO56_RS02170;Dbxref=GenBank:WP_000228705.1;Name=WP_000228705.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=CCO56_RS02170;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228705.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 418913 419839 . - . ID=gene-CCO56_RS02175;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=CCO56_RS02175;old_locus_tag=CCO56_02175 NZ_NPMB01000001.1 Protein Homology CDS 418913 419839 . - 0 ID=cds-WP_023212934.1;Parent=gene-CCO56_RS02175;Dbxref=GenBank:WP_023212934.1;Name=WP_023212934.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=CCO56_RS02175;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_023212934.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 419954 420406 . - . ID=gene-CCO56_RS02180;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CCO56_RS02180;old_locus_tag=CCO56_02180 NZ_NPMB01000001.1 Protein Homology CDS 419954 420406 . - 0 ID=cds-WP_000131699.1;Parent=gene-CCO56_RS02180;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=CCO56_RS02180;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 420399 420484 . - . ID=gene-CCO56_RS23585;Name=CCO56_RS23585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23585;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 420399 420484 . - 0 ID=cds-CCO56_RS23585;Parent=gene-CCO56_RS23585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=CCO56_RS23585;product=ryhB-regulated fur leader peptide;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 420688 421218 . - . ID=gene-CCO56_RS02185;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=CCO56_RS02185;old_locus_tag=CCO56_02185 NZ_NPMB01000001.1 Protein Homology CDS 420688 421218 . - 0 ID=cds-WP_001018621.1;Parent=gene-CCO56_RS02185;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=CCO56_RS02185;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 421369 421662 . - . ID=gene-CCO56_RS02190;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=CCO56_RS02190;old_locus_tag=CCO56_02190 NZ_NPMB01000001.1 Protein Homology CDS 421369 421662 . - 0 ID=cds-WP_001040939.1;Parent=gene-CCO56_RS02190;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=CCO56_RS02190;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 421796 422566 . - . ID=gene-CCO56_RS02195;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=CCO56_RS02195;old_locus_tag=CCO56_02195 NZ_NPMB01000001.1 Protein Homology CDS 421796 422566 . - 0 ID=cds-WP_080177261.1;Parent=gene-CCO56_RS02195;Dbxref=GenBank:WP_080177261.1;Name=WP_080177261.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=CCO56_RS02195;product=esterase;protein_id=WP_080177261.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 422751 423293 . + . ID=gene-CCO56_RS02200;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=CCO56_RS02200;old_locus_tag=CCO56_02200 NZ_NPMB01000001.1 Protein Homology CDS 422751 423293 . + 0 ID=cds-WP_023137387.1;Parent=gene-CCO56_RS02200;Dbxref=GenBank:WP_023137387.1;Name=WP_023137387.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=CCO56_RS02200;product=replication initiation negative regulator SeqA;protein_id=WP_023137387.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 423318 424958 . + . ID=gene-CCO56_RS02205;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=CCO56_RS02205;old_locus_tag=CCO56_02205 NZ_NPMB01000001.1 Protein Homology CDS 423318 424958 . + 0 ID=cds-WP_000974385.1;Parent=gene-CCO56_RS02205;Dbxref=GenBank:WP_000974385.1;Name=WP_000974385.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=CCO56_RS02205;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974385.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 425073 425558 . - . ID=gene-CCO56_RS02210;Name=CCO56_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02210;old_locus_tag=CCO56_02210 NZ_NPMB01000001.1 Protein Homology CDS 425073 425558 . - 0 ID=cds-WP_094882028.1;Parent=gene-CCO56_RS02210;Dbxref=GenBank:WP_094882028.1;Name=WP_094882028.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=CCO56_RS02210;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_094882028.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 425623 426942 . - . ID=gene-CCO56_RS02215;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=CCO56_RS02215;old_locus_tag=CCO56_02215 NZ_NPMB01000001.1 Protein Homology CDS 425623 426942 . - 0 ID=cds-WP_000042658.1;Parent=gene-CCO56_RS02215;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=CCO56_RS02215;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 426939 429137 . - . ID=gene-CCO56_RS02220;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=CCO56_RS02220;old_locus_tag=CCO56_02220 NZ_NPMB01000001.1 Protein Homology CDS 426939 429137 . - 0 ID=cds-WP_080177260.1;Parent=gene-CCO56_RS02220;Dbxref=GenBank:WP_080177260.1;Name=WP_080177260.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=CCO56_RS02220;product=ornithine decarboxylase SpeF;protein_id=WP_080177260.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 429518 429622 . - . ID=gene-CCO56_RS23270;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=CCO56_RS23270 NZ_NPMB01000001.1 Protein Homology CDS 429518 429622 . - 0 ID=cds-WP_015632840.1;Parent=gene-CCO56_RS23270;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=CCO56_RS23270;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 429900 430577 . - . ID=gene-CCO56_RS02225;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=CCO56_RS02225;old_locus_tag=CCO56_02225 NZ_NPMB01000001.1 Protein Homology CDS 429900 430577 . - 0 ID=cds-WP_000186053.1;Parent=gene-CCO56_RS02225;Dbxref=GenBank:WP_000186053.1;Name=WP_000186053.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=CCO56_RS02225;product=two-component system response regulator KdpE;protein_id=WP_000186053.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 430574 433258 . - . ID=gene-CCO56_RS02230;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=CCO56_RS02230;old_locus_tag=CCO56_02230 NZ_NPMB01000001.1 Protein Homology CDS 430574 433258 . - 0 ID=cds-WP_001528833.1;Parent=gene-CCO56_RS02230;Dbxref=GenBank:WP_001528833.1;Name=WP_001528833.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=CCO56_RS02230;product=two-component system sensor histidine kinase KdpD;protein_id=WP_001528833.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 433255 433839 . - . ID=gene-CCO56_RS02235;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CCO56_RS02235;old_locus_tag=CCO56_02235 NZ_NPMB01000001.1 Protein Homology CDS 433255 433839 . - 0 ID=cds-WP_080177262.1;Parent=gene-CCO56_RS02235;Dbxref=GenBank:WP_080177262.1;Name=WP_080177262.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=CCO56_RS02235;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_080177262.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 433848 435896 . - . ID=gene-CCO56_RS02240;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CCO56_RS02240;old_locus_tag=CCO56_02240 NZ_NPMB01000001.1 Protein Homology CDS 433848 435896 . - 0 ID=cds-WP_000088026.1;Parent=gene-CCO56_RS02240;Dbxref=GenBank:WP_000088026.1;Name=WP_000088026.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=CCO56_RS02240;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088026.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 435917 437596 . - . ID=gene-CCO56_RS02245;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CCO56_RS02245;old_locus_tag=CCO56_02245 NZ_NPMB01000001.1 Protein Homology CDS 435917 437596 . - 0 ID=cds-WP_000730068.1;Parent=gene-CCO56_RS02245;Dbxref=GenBank:WP_000730068.1;Name=WP_000730068.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=CCO56_RS02245;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730068.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 437596 437685 . - . ID=gene-CCO56_RS02250;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CCO56_RS02250;old_locus_tag=CCO56_02250 NZ_NPMB01000001.1 Protein Homology CDS 437596 437685 . - 0 ID=cds-WP_001670793.1;Parent=gene-CCO56_RS02250;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=CCO56_RS02250;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 438022 438228 . + . ID=gene-CCO56_RS02255;Name=CCO56_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02255;old_locus_tag=CCO56_02255 NZ_NPMB01000001.1 Protein Homology CDS 438022 438228 . + 0 ID=cds-WP_000401433.1;Parent=gene-CCO56_RS02255;Dbxref=GenBank:WP_000401433.1;Name=WP_000401433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=CCO56_RS02255;product=YbfA family protein;protein_id=WP_000401433.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 438339 439760 . + . ID=gene-CCO56_RS02260;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=CCO56_RS02260;old_locus_tag=CCO56_02260 NZ_NPMB01000001.1 Protein Homology CDS 438339 439760 . + 0 ID=cds-WP_001142021.1;Parent=gene-CCO56_RS02260;Dbxref=GenBank:WP_001142021.1;Name=WP_001142021.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=CCO56_RS02260;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142021.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 439799 441280 . - . ID=gene-CCO56_RS02265;Name=CCO56_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02265;old_locus_tag=CCO56_02265 NZ_NPMB01000001.1 Protein Homology CDS 439799 441280 . - 0 ID=cds-WP_001041123.1;Parent=gene-CCO56_RS02265;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=CCO56_RS02265;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 441609 442352 . + . ID=gene-CCO56_RS02275;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=CCO56_RS02275;old_locus_tag=CCO56_02275 NZ_NPMB01000001.1 Protein Homology CDS 441609 442352 . + 0 ID=cds-WP_080177259.1;Parent=gene-CCO56_RS02275;Dbxref=GenBank:WP_080177259.1;Name=WP_080177259.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=CCO56_RS02275;product=radiation resistance protein YbgI;protein_id=WP_080177259.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 442368 443024 . + . ID=gene-CCO56_RS02280;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CCO56_RS02280;old_locus_tag=CCO56_02280 NZ_NPMB01000001.1 Protein Homology CDS 442368 443024 . + 0 ID=cds-WP_001188367.1;Parent=gene-CCO56_RS02280;Dbxref=GenBank:WP_001188367.1;Name=WP_001188367.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=CCO56_RS02280;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188367.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 443018 443950 . + . ID=gene-CCO56_RS02285;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=CCO56_RS02285;old_locus_tag=CCO56_02285 NZ_NPMB01000001.1 Protein Homology CDS 443018 443950 . + 0 ID=cds-WP_000932044.1;Parent=gene-CCO56_RS02285;Dbxref=GenBank:WP_000932044.1;Name=WP_000932044.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=CCO56_RS02285;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932044.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 443940 444674 . + . ID=gene-CCO56_RS02290;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CCO56_RS02290;old_locus_tag=CCO56_02290 NZ_NPMB01000001.1 Protein Homology CDS 443940 444674 . + 0 ID=cds-WP_001017913.1;Parent=gene-CCO56_RS02290;Dbxref=GenBank:WP_001017913.1;Name=WP_001017913.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=CCO56_RS02290;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017913.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 444796 445587 . + . ID=gene-CCO56_RS02295;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=CCO56_RS02295;old_locus_tag=CCO56_02295 NZ_NPMB01000001.1 Protein Homology CDS 444796 445587 . + 0 ID=cds-WP_023230794.1;Parent=gene-CCO56_RS02295;Dbxref=GenBank:WP_023230794.1;Name=WP_023230794.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=CCO56_RS02295;product=endonuclease VIII;protein_id=WP_023230794.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 445642 446688 . - . ID=gene-CCO56_RS02300;Name=CCO56_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02300;old_locus_tag=CCO56_02300 NZ_NPMB01000001.1 Protein Homology CDS 445642 446688 . - 0 ID=cds-WP_001122054.1;Parent=gene-CCO56_RS02300;Dbxref=GenBank:WP_001122054.1;Name=WP_001122054.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=CCO56_RS02300;product=AbrB family transcriptional regulator;protein_id=WP_001122054.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 446825 448108 . - . ID=gene-CCO56_RS02305;Name=CCO56_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02305;old_locus_tag=CCO56_02305 NZ_NPMB01000001.1 Protein Homology CDS 446825 448108 . - 0 ID=cds-WP_000785811.1;Parent=gene-CCO56_RS02305;Dbxref=GenBank:WP_000785811.1;Name=WP_000785811.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=CCO56_RS02305;product=citrate synthase;protein_id=WP_000785811.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 448334 448465 . - . ID=gene-CCO56_RS24040;Name=CCO56_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24040 NZ_NPMB01000001.1 Protein Homology CDS 448334 448465 . - 0 ID=cds-WP_418142699.1;Parent=gene-CCO56_RS24040;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=CCO56_RS24040;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 448848 449252 . + . ID=gene-CCO56_RS02320;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=CCO56_RS02320;old_locus_tag=CCO56_02320 NZ_NPMB01000001.1 Protein Homology CDS 448848 449252 . + 0 ID=cds-WP_000263340.1;Parent=gene-CCO56_RS02320;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=CCO56_RS02320;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 449246 449593 . + . ID=gene-CCO56_RS02325;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=CCO56_RS02325;old_locus_tag=CCO56_02325 NZ_NPMB01000001.1 Protein Homology CDS 449246 449593 . + 0 ID=cds-WP_079982516.1;Parent=gene-CCO56_RS02325;Dbxref=GenBank:WP_079982516.1;Name=WP_079982516.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=CCO56_RS02325;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_079982516.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 449593 451359 . + . ID=gene-CCO56_RS02330;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CCO56_RS02330;old_locus_tag=CCO56_02330 NZ_NPMB01000001.1 Protein Homology CDS 449593 451359 . + 0 ID=cds-WP_000775561.1;Parent=gene-CCO56_RS02330;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=CCO56_RS02330;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 451376 452092 . + . ID=gene-CCO56_RS02335;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CCO56_RS02335;old_locus_tag=CCO56_02335 NZ_NPMB01000001.1 Protein Homology CDS 451376 452092 . + 0 ID=cds-WP_001537859.1;Parent=gene-CCO56_RS02335;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=CCO56_RS02335;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 452487 455288 . + . ID=gene-CCO56_RS02340;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=CCO56_RS02340;old_locus_tag=CCO56_02340 NZ_NPMB01000001.1 Protein Homology CDS 452487 455288 . + 0 ID=cds-WP_001181500.1;Parent=gene-CCO56_RS02340;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=CCO56_RS02340;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 455303 456511 . + . ID=gene-CCO56_RS02345;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=CCO56_RS02345;old_locus_tag=CCO56_02345 NZ_NPMB01000001.1 Protein Homology CDS 455303 456511 . + 0 ID=cds-WP_000099858.1;Parent=gene-CCO56_RS02345;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=CCO56_RS02345;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 456653 457819 . + . ID=gene-CCO56_RS02350;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CCO56_RS02350;old_locus_tag=CCO56_02350 NZ_NPMB01000001.1 Protein Homology CDS 456653 457819 . + 0 ID=cds-WP_001048590.1;Parent=gene-CCO56_RS02350;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=CCO56_RS02350;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 457819 458688 . + . ID=gene-CCO56_RS02355;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CCO56_RS02355;old_locus_tag=CCO56_02355 NZ_NPMB01000001.1 Protein Homology CDS 457819 458688 . + 0 ID=cds-WP_000114631.1;Parent=gene-CCO56_RS02355;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=CCO56_RS02355;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 460271 461839 . + . ID=gene-CCO56_RS02360;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=CCO56_RS02360;old_locus_tag=CCO56_02360 NZ_NPMB01000001.1 Protein Homology CDS 460271 461839 . + 0 ID=cds-WP_000884369.1;Parent=gene-CCO56_RS02360;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=CCO56_RS02360;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 461855 462994 . + . ID=gene-CCO56_RS02365;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO56_RS02365;old_locus_tag=CCO56_02365 NZ_NPMB01000001.1 Protein Homology CDS 461855 462994 . + 0 ID=cds-WP_000568258.1;Parent=gene-CCO56_RS02365;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=CCO56_RS02365;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 463009 463122 . + . ID=gene-CCO56_RS02370;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=CCO56_RS02370;old_locus_tag=CCO56_02370 NZ_NPMB01000001.1 Protein Homology CDS 463009 463122 . + 0 ID=cds-WP_000270278.1;Parent=gene-CCO56_RS02370;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=CCO56_RS02370;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 463122 463415 . + . ID=gene-CCO56_RS02375;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=CCO56_RS02375;old_locus_tag=CCO56_02375 NZ_NPMB01000001.1 Protein Homology CDS 463122 463415 . + 0 ID=cds-WP_000148790.1;Parent=gene-CCO56_RS02375;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=CCO56_RS02375;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 463644 464048 . + . ID=gene-CCO56_RS02380;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=CCO56_RS02380;old_locus_tag=CCO56_02380 NZ_NPMB01000001.1 Protein Homology CDS 463644 464048 . + 0 ID=cds-WP_001046240.1;Parent=gene-CCO56_RS02380;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=CCO56_RS02380;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 464045 464737 . + . ID=gene-CCO56_RS02385;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=CCO56_RS02385;old_locus_tag=CCO56_02385 NZ_NPMB01000001.1 Protein Homology CDS 464045 464737 . + 0 ID=cds-WP_000131318.1;Parent=gene-CCO56_RS02385;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=CCO56_RS02385;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 464741 465169 . + . ID=gene-CCO56_RS02390;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=CCO56_RS02390;old_locus_tag=CCO56_02390 NZ_NPMB01000001.1 Protein Homology CDS 464741 465169 . + 0 ID=cds-WP_000124676.1;Parent=gene-CCO56_RS02390;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=CCO56_RS02390;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 465234 466412 . + . ID=gene-CCO56_RS02395;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=CCO56_RS02395;old_locus_tag=CCO56_02395 NZ_NPMB01000001.1 Protein Homology CDS 465234 466412 . + 0 ID=cds-WP_000030589.1;Parent=gene-CCO56_RS02395;Dbxref=GenBank:WP_000030589.1;Name=WP_000030589.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=CCO56_RS02395;product=cell envelope integrity protein TolA;protein_id=WP_000030589.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 466536 467828 . + . ID=gene-CCO56_RS02400;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=CCO56_RS02400;old_locus_tag=CCO56_02400 NZ_NPMB01000001.1 Protein Homology CDS 466536 467828 . + 0 ID=cds-WP_001562341.1;Parent=gene-CCO56_RS02400;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=CCO56_RS02400;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 467863 468387 . + . ID=gene-CCO56_RS02405;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=CCO56_RS02405;old_locus_tag=CCO56_02405 NZ_NPMB01000001.1 Protein Homology CDS 467863 468387 . + 0 ID=cds-WP_001176621.1;Parent=gene-CCO56_RS02405;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=CCO56_RS02405;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 468397 469185 . + . ID=gene-CCO56_RS02410;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=CCO56_RS02410;old_locus_tag=CCO56_02410 NZ_NPMB01000001.1 Protein Homology CDS 468397 469185 . + 0 ID=cds-WP_001528827.1;Parent=gene-CCO56_RS02410;Dbxref=GenBank:WP_001528827.1;Name=WP_001528827.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=CCO56_RS02410;product=cell division protein CpoB;protein_id=WP_001528827.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 469350 469425 . + . ID=gene-CCO56_RS02415;Name=CCO56_RS02415;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02415;old_locus_tag=CCO56_02415 NZ_NPMB01000001.1 tRNAscan-SE tRNA 469350 469425 . + . ID=rna-CCO56_RS02415;Parent=gene-CCO56_RS02415;anticodon=(pos:469383..469385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02415;product=tRNA-Lys NZ_NPMB01000001.1 tRNAscan-SE exon 469350 469425 . + . ID=exon-CCO56_RS02415-1;Parent=rna-CCO56_RS02415;anticodon=(pos:469383..469385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02415;product=tRNA-Lys NZ_NPMB01000001.1 RefSeq gene 469563 469638 . + . ID=gene-CCO56_RS02420;Name=CCO56_RS02420;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02420;old_locus_tag=CCO56_02420 NZ_NPMB01000001.1 tRNAscan-SE tRNA 469563 469638 . + . ID=rna-CCO56_RS02420;Parent=gene-CCO56_RS02420;anticodon=(pos:469596..469598);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02420;product=tRNA-Val NZ_NPMB01000001.1 tRNAscan-SE exon 469563 469638 . + . ID=exon-CCO56_RS02420-1;Parent=rna-CCO56_RS02420;anticodon=(pos:469596..469598);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02420;product=tRNA-Val NZ_NPMB01000001.1 RefSeq gene 469642 469717 . + . ID=gene-CCO56_RS02425;Name=CCO56_RS02425;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02425;old_locus_tag=CCO56_02425 NZ_NPMB01000001.1 tRNAscan-SE tRNA 469642 469717 . + . ID=rna-CCO56_RS02425;Parent=gene-CCO56_RS02425;anticodon=(pos:469675..469677);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02425;product=tRNA-Lys NZ_NPMB01000001.1 tRNAscan-SE exon 469642 469717 . + . ID=exon-CCO56_RS02425-1;Parent=rna-CCO56_RS02425;anticodon=(pos:469675..469677);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02425;product=tRNA-Lys NZ_NPMB01000001.1 RefSeq gene 469857 469932 . + . ID=gene-CCO56_RS02430;Name=CCO56_RS02430;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02430;old_locus_tag=CCO56_02430 NZ_NPMB01000001.1 tRNAscan-SE tRNA 469857 469932 . + . ID=rna-CCO56_RS02430;Parent=gene-CCO56_RS02430;anticodon=(pos:469890..469892);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02430;product=tRNA-Lys NZ_NPMB01000001.1 tRNAscan-SE exon 469857 469932 . + . ID=exon-CCO56_RS02430-1;Parent=rna-CCO56_RS02430;anticodon=(pos:469890..469892);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02430;product=tRNA-Lys NZ_NPMB01000001.1 RefSeq gene 470067 470142 . + . ID=gene-CCO56_RS02435;Name=CCO56_RS02435;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS02435;old_locus_tag=CCO56_02435 NZ_NPMB01000001.1 tRNAscan-SE tRNA 470067 470142 . + . ID=rna-CCO56_RS02435;Parent=gene-CCO56_RS02435;anticodon=(pos:470100..470102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02435;product=tRNA-Lys NZ_NPMB01000001.1 tRNAscan-SE exon 470067 470142 . + . ID=exon-CCO56_RS02435-1;Parent=rna-CCO56_RS02435;anticodon=(pos:470100..470102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS02435;product=tRNA-Lys NZ_NPMB01000001.1 RefSeq gene 470172 470296 . + . ID=gene-CCO56_RS02440;Name=CCO56_RS02440;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO56_RS02440;old_locus_tag=CCO56_02440 NZ_NPMB01000001.1 cmsearch ncRNA 470172 470296 . + . ID=rna-CCO56_RS02440;Parent=gene-CCO56_RS02440;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS02440;product=RtT sRNA NZ_NPMB01000001.1 cmsearch exon 470172 470296 . + . ID=exon-CCO56_RS02440-1;Parent=rna-CCO56_RS02440;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS02440;product=RtT sRNA NZ_NPMB01000001.1 RefSeq gene 470326 470451 . + . ID=gene-CCO56_RS02445;Name=CCO56_RS02445;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO56_RS02445;old_locus_tag=CCO56_02445 NZ_NPMB01000001.1 cmsearch ncRNA 470326 470451 . + . ID=rna-CCO56_RS02445;Parent=gene-CCO56_RS02445;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS02445;product=RtT sRNA NZ_NPMB01000001.1 cmsearch exon 470326 470451 . + . ID=exon-CCO56_RS02445-1;Parent=rna-CCO56_RS02445;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS02445;product=RtT sRNA NZ_NPMB01000001.1 RefSeq gene 470745 471788 . + . ID=gene-CCO56_RS02450;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=CCO56_RS02450;old_locus_tag=CCO56_02450 NZ_NPMB01000001.1 Protein Homology CDS 470745 471788 . + 0 ID=cds-WP_080177322.1;Parent=gene-CCO56_RS02450;Dbxref=GenBank:WP_080177322.1;Name=WP_080177322.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=CCO56_RS02450;product=quinolinate synthase NadA;protein_id=WP_080177322.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 471813 472532 . + . ID=gene-CCO56_RS02455;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=CCO56_RS02455;old_locus_tag=CCO56_02455 NZ_NPMB01000001.1 Protein Homology CDS 471813 472532 . + 0 ID=cds-WP_000345365.1;Parent=gene-CCO56_RS02455;Dbxref=GenBank:WP_000345365.1;Name=WP_000345365.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=CCO56_RS02455;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345365.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 472529 473467 . - . ID=gene-CCO56_RS02460;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=CCO56_RS02460;old_locus_tag=CCO56_02460 NZ_NPMB01000001.1 Protein Homology CDS 472529 473467 . - 0 ID=cds-WP_080177321.1;Parent=gene-CCO56_RS02460;Dbxref=GenBank:WP_080177321.1;Name=WP_080177321.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=CCO56_RS02460;product=CDF family zinc transporter ZitB;protein_id=WP_080177321.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 473578 473964 . - . ID=gene-CCO56_RS02465;Name=CCO56_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02465;old_locus_tag=CCO56_02465 NZ_NPMB01000001.1 Protein Homology CDS 473578 473964 . - 0 ID=cds-WP_000784380.1;Parent=gene-CCO56_RS02465;Dbxref=GenBank:WP_000784380.1;Name=WP_000784380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=CCO56_RS02465;product=YbgS-like family protein;protein_id=WP_000784380.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 474284 475336 . + . ID=gene-CCO56_RS02470;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=CCO56_RS02470;old_locus_tag=CCO56_02470 NZ_NPMB01000001.1 Protein Homology CDS 474284 475336 . + 0 ID=cds-WP_001109234.1;Parent=gene-CCO56_RS02470;Dbxref=GenBank:WP_001109234.1;Name=WP_001109234.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=CCO56_RS02470;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109234.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 475490 476569 . + . ID=gene-CCO56_RS02475;Name=CCO56_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02475;old_locus_tag=CCO56_02475 NZ_NPMB01000001.1 Protein Homology CDS 475490 476569 . + 0 ID=cds-WP_023244999.1;Parent=gene-CCO56_RS02475;Dbxref=GenBank:WP_023244999.1;Name=WP_023244999.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=CCO56_RS02475;product=FecCD family ABC transporter permease;protein_id=WP_023244999.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 476569 477345 . + . ID=gene-CCO56_RS02480;Name=CCO56_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02480;old_locus_tag=CCO56_02480 NZ_NPMB01000001.1 Protein Homology CDS 476569 477345 . + 0 ID=cds-WP_080177320.1;Parent=gene-CCO56_RS02480;Dbxref=GenBank:WP_080177320.1;Name=WP_080177320.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=CCO56_RS02480;product=ABC transporter ATP-binding protein;protein_id=WP_080177320.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 477436 478188 . - . ID=gene-CCO56_RS02485;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=CCO56_RS02485;old_locus_tag=CCO56_02485 NZ_NPMB01000001.1 Protein Homology CDS 477436 478188 . - 0 ID=cds-WP_000301554.1;Parent=gene-CCO56_RS02485;Dbxref=GenBank:WP_000301554.1;Name=WP_000301554.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=CCO56_RS02485;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301554.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 478412 479452 . - . ID=gene-CCO56_RS02495;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=CCO56_RS02495;old_locus_tag=CCO56_02495 NZ_NPMB01000001.1 Protein Homology CDS 478412 479452 . - 0 ID=cds-WP_000931428.1;Parent=gene-CCO56_RS02495;Dbxref=GenBank:WP_000931428.1;Name=WP_000931428.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=CCO56_RS02495;product=galactose-1-epimerase;protein_id=WP_000931428.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 479446 480594 . - . ID=gene-CCO56_RS02500;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CCO56_RS02500;old_locus_tag=CCO56_02500 NZ_NPMB01000001.1 Protein Homology CDS 479446 480594 . - 0 ID=cds-WP_001049364.1;Parent=gene-CCO56_RS02500;Dbxref=GenBank:WP_001049364.1;Name=WP_001049364.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=CCO56_RS02500;product=galactokinase;protein_id=WP_001049364.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 480597 481643 . - . ID=gene-CCO56_RS02505;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CCO56_RS02505;old_locus_tag=CCO56_02505 NZ_NPMB01000001.1 Protein Homology CDS 480597 481643 . - 0 ID=cds-WP_000187473.1;Parent=gene-CCO56_RS02505;Dbxref=GenBank:WP_000187473.1;Name=WP_000187473.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=CCO56_RS02505;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187473.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 481654 482670 . - . ID=gene-CCO56_RS02510;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CCO56_RS02510;old_locus_tag=CCO56_02510 NZ_NPMB01000001.1 Protein Homology CDS 481654 482670 . - 0 ID=cds-WP_001265465.1;Parent=gene-CCO56_RS02510;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=CCO56_RS02510;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 482893 483801 . - . ID=gene-CCO56_RS02515;Name=CCO56_RS02515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS02515;old_locus_tag=CCO56_02515;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 482893 483801 . - 0 ID=cds-CCO56_RS02515;Parent=gene-CCO56_RS02515;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=CCO56_RS02515;product=DUF2167 domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 483972 485447 . - . ID=gene-CCO56_RS02520;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=CCO56_RS02520;old_locus_tag=CCO56_02520 NZ_NPMB01000001.1 Protein Homology CDS 483972 485447 . - 0 ID=cds-WP_080177318.1;Parent=gene-CCO56_RS02520;Dbxref=GenBank:WP_080177318.1;Name=WP_080177318.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=CCO56_RS02520;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_080177318.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 485515 486303 . - . ID=gene-CCO56_RS02530;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=CCO56_RS02530;old_locus_tag=CCO56_02530 NZ_NPMB01000001.1 Protein Homology CDS 485515 486303 . - 0 ID=cds-WP_001147416.1;Parent=gene-CCO56_RS02530;Dbxref=GenBank:WP_001147416.1;Name=WP_001147416.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=CCO56_RS02530;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147416.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 486432 486581 . + . ID=gene-CCO56_RS02535;Name=CCO56_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02535;old_locus_tag=CCO56_02535 NZ_NPMB01000001.1 Protein Homology CDS 486432 486581 . + 0 ID=cds-WP_000891513.1;Parent=gene-CCO56_RS02535;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=CCO56_RS02535;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 486748 487521 . + . ID=gene-CCO56_RS02540;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CCO56_RS02540;old_locus_tag=CCO56_02540 NZ_NPMB01000001.1 Protein Homology CDS 486748 487521 . + 0 ID=cds-WP_080177317.1;Parent=gene-CCO56_RS02540;Dbxref=GenBank:WP_080177317.1;Name=WP_080177317.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=CCO56_RS02540;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_080177317.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 487521 488210 . + . ID=gene-CCO56_RS02545;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CCO56_RS02545;old_locus_tag=CCO56_02545 NZ_NPMB01000001.1 Protein Homology CDS 487521 488210 . + 0 ID=cds-WP_000604026.1;Parent=gene-CCO56_RS02545;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=CCO56_RS02545;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 488213 489271 . + . ID=gene-CCO56_RS02550;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=CCO56_RS02550;old_locus_tag=CCO56_02550 NZ_NPMB01000001.1 Protein Homology CDS 488213 489271 . + 0 ID=cds-WP_000891710.1;Parent=gene-CCO56_RS02550;Dbxref=GenBank:WP_000891710.1;Name=WP_000891710.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=CCO56_RS02550;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891710.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 489272 490090 . - . ID=gene-CCO56_RS02555;Name=CCO56_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02555;old_locus_tag=CCO56_02555 NZ_NPMB01000001.1 Protein Homology CDS 489272 490090 . - 0 ID=cds-WP_001748281.1;Parent=gene-CCO56_RS02555;Dbxref=GenBank:WP_001748281.1;Name=WP_001748281.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=CCO56_RS02555;product=pyridoxal phosphatase;protein_id=WP_001748281.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 490254 491249 . + . ID=gene-CCO56_RS02560;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=CCO56_RS02560;old_locus_tag=CCO56_02560 NZ_NPMB01000001.1 Protein Homology CDS 490254 491249 . + 0 ID=cds-WP_000815468.1;Parent=gene-CCO56_RS02560;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=CCO56_RS02560;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 491393 492676 . - . ID=gene-CCO56_RS02565;Name=CCO56_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02565;old_locus_tag=CCO56_02565 NZ_NPMB01000001.1 Protein Homology CDS 491393 492676 . - 0 ID=cds-WP_001094762.1;Parent=gene-CCO56_RS02565;Dbxref=GenBank:WP_001094762.1;Name=WP_001094762.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=CCO56_RS02565;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094762.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 492811 493146 . - . ID=gene-CCO56_RS02570;Name=CCO56_RS02570;end_range=493146,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS02570;old_locus_tag=CCO56_02570;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 492811 493146 . - 0 ID=cds-CCO56_RS02570;Parent=gene-CCO56_RS02570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=493146,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533644.1;locus_tag=CCO56_RS02570;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 493184 494391 . - . ID=gene-CCO56_RS02575;Name=CCO56_RS02575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS02575;old_locus_tag=CCO56_02575;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 493184 494391 . - 0 ID=cds-CCO56_RS02575;Parent=gene-CCO56_RS02575;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO56_RS02575;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 494447 495399 . - . ID=gene-CCO56_RS23275;Name=CCO56_RS23275;end_range=495399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23275;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 494447 495399 . - 0 ID=cds-CCO56_RS23275;Parent=gene-CCO56_RS23275;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=495399,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=CCO56_RS23275;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 495409 496560 . - . ID=gene-CCO56_RS02590;Name=CCO56_RS02590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS02590;old_locus_tag=CCO56_02590;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 495409 496560 . - 0 ID=cds-CCO56_RS02590;Parent=gene-CCO56_RS02590;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=CCO56_RS02590;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 496625 496832 . - . ID=gene-CCO56_RS23280;Name=CCO56_RS23280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23280;partial=true;pseudo=true;start_range=.,496625 NZ_NPMB01000001.1 Protein Homology CDS 496625 496832 . - 0 ID=cds-CCO56_RS23280;Parent=gene-CCO56_RS23280;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=CCO56_RS23280;partial=true;product=transposase;pseudo=true;start_range=.,496625;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 497679 499136 . - . ID=gene-CCO56_RS02600;Name=CCO56_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02600;old_locus_tag=CCO56_02600 NZ_NPMB01000001.1 Protein Homology CDS 497679 499136 . - 0 ID=cds-WP_080177316.1;Parent=gene-CCO56_RS02600;Dbxref=GenBank:WP_080177316.1;Name=WP_080177316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001544764.1;locus_tag=CCO56_RS02600;product=hypothetical protein;protein_id=WP_080177316.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 499136 500053 . - . ID=gene-CCO56_RS02605;Name=CCO56_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02605;old_locus_tag=CCO56_02605 NZ_NPMB01000001.1 Protein Homology CDS 499136 500053 . - 0 ID=cds-WP_088546390.1;Parent=gene-CCO56_RS02605;Dbxref=GenBank:WP_088546390.1;Name=WP_088546390.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=CCO56_RS02605;product=glycosyltransferase family 2 protein;protein_id=WP_088546390.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 500050 500412 . - . ID=gene-CCO56_RS02610;Name=CCO56_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02610;old_locus_tag=CCO56_02610 NZ_NPMB01000001.1 Protein Homology CDS 500050 500412 . - 0 ID=cds-WP_080086402.1-2;Parent=gene-CCO56_RS02610;Dbxref=GenBank:WP_080086402.1;Name=WP_080086402.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=CCO56_RS02610;product=GtrA family protein;protein_id=WP_080086402.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 501035 502258 . + . ID=gene-CCO56_RS02615;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CCO56_RS02615;old_locus_tag=CCO56_02615 NZ_NPMB01000001.1 Protein Homology CDS 501035 502258 . + 0 ID=cds-WP_001528787.1;Parent=gene-CCO56_RS02615;Dbxref=GenBank:WP_001528787.1;Name=WP_001528787.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=CCO56_RS02615;product=imidazolonepropionase;protein_id=WP_001528787.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 502255 503196 . + . ID=gene-CCO56_RS02620;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CCO56_RS02620;old_locus_tag=CCO56_02620 NZ_NPMB01000001.1 Protein Homology CDS 502255 503196 . + 0 ID=cds-WP_001528744.1;Parent=gene-CCO56_RS02620;Dbxref=GenBank:WP_001528744.1;Name=WP_001528744.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=CCO56_RS02620;product=formimidoylglutamase;protein_id=WP_001528744.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 503241 503966 . + . ID=gene-CCO56_RS02625;Name=CCO56_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02625;old_locus_tag=CCO56_02625 NZ_NPMB01000001.1 Protein Homology CDS 503241 503966 . + 0 ID=cds-WP_001578663.1;Parent=gene-CCO56_RS02625;Dbxref=GenBank:WP_001578663.1;Name=WP_001578663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=CCO56_RS02625;product=histidine utilization repressor;protein_id=WP_001578663.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 504163 505848 . + . ID=gene-CCO56_RS02630;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CCO56_RS02630;old_locus_tag=CCO56_02630 NZ_NPMB01000001.1 Protein Homology CDS 504163 505848 . + 0 ID=cds-WP_023230530.1;Parent=gene-CCO56_RS02630;Dbxref=GenBank:WP_023230530.1;Name=WP_023230530.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=CCO56_RS02630;product=urocanate hydratase;protein_id=WP_023230530.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 505850 507370 . + . ID=gene-CCO56_RS02635;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CCO56_RS02635;old_locus_tag=CCO56_02635 NZ_NPMB01000001.1 Protein Homology CDS 505850 507370 . + 0 ID=cds-WP_079964628.1;Parent=gene-CCO56_RS02635;Dbxref=GenBank:WP_079964628.1;Name=WP_079964628.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=CCO56_RS02635;product=histidine ammonia-lyase;protein_id=WP_079964628.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 507455 507931 . - . ID=gene-CCO56_RS02640;Name=CCO56_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02640;old_locus_tag=CCO56_02640 NZ_NPMB01000001.1 Protein Homology CDS 507455 507931 . - 0 ID=cds-WP_000767403.1;Parent=gene-CCO56_RS02640;Dbxref=GenBank:WP_000767403.1;Name=WP_000767403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=CCO56_RS02640;product=kinase inhibitor;protein_id=WP_000767403.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 507989 509278 . - . ID=gene-CCO56_RS02645;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CCO56_RS02645;old_locus_tag=CCO56_02645 NZ_NPMB01000001.1 Protein Homology CDS 507989 509278 . - 0 ID=cds-WP_079964629.1;Parent=gene-CCO56_RS02645;Dbxref=GenBank:WP_079964629.1;Name=WP_079964629.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=CCO56_RS02645;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_079964629.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 509365 510405 . + . ID=gene-CCO56_RS02650;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CCO56_RS02650;old_locus_tag=CCO56_02650 NZ_NPMB01000001.1 Protein Homology CDS 509365 510405 . + 0 ID=cds-WP_000090727.1;Parent=gene-CCO56_RS02650;Dbxref=GenBank:WP_000090727.1;Name=WP_000090727.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=CCO56_RS02650;product=biotin synthase BioB;protein_id=WP_000090727.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 510402 511559 . + . ID=gene-CCO56_RS02655;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=CCO56_RS02655;old_locus_tag=CCO56_02655 NZ_NPMB01000001.1 Protein Homology CDS 510402 511559 . + 0 ID=cds-WP_080176988.1;Parent=gene-CCO56_RS02655;Dbxref=GenBank:WP_080176988.1;Name=WP_080176988.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=CCO56_RS02655;product=8-amino-7-oxononanoate synthase;protein_id=WP_080176988.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 511543 512298 . + . ID=gene-CCO56_RS02660;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=CCO56_RS02660;old_locus_tag=CCO56_02660 NZ_NPMB01000001.1 Protein Homology CDS 511543 512298 . + 0 ID=cds-WP_000079908.1;Parent=gene-CCO56_RS02660;Dbxref=GenBank:WP_000079908.1;Name=WP_000079908.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=CCO56_RS02660;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079908.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 512291 512977 . + . ID=gene-CCO56_RS02665;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO56_RS02665;old_locus_tag=CCO56_02665 NZ_NPMB01000001.1 Protein Homology CDS 512291 512977 . + 0 ID=cds-WP_080176989.1;Parent=gene-CCO56_RS02665;Dbxref=GenBank:WP_080176989.1;Name=WP_080176989.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=CCO56_RS02665;product=dethiobiotin synthase;protein_id=WP_080176989.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 513628 515649 . + . ID=gene-CCO56_RS02675;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CCO56_RS02675;old_locus_tag=CCO56_02675 NZ_NPMB01000001.1 Protein Homology CDS 513628 515649 . + 0 ID=cds-WP_031570028.1;Parent=gene-CCO56_RS02675;Dbxref=GenBank:WP_031570028.1;Name=WP_031570028.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=CCO56_RS02675;product=excinuclease ABC subunit UvrB;protein_id=WP_031570028.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 515958 516131 . + . ID=gene-CCO56_RS02680;Name=CCO56_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02680;old_locus_tag=CCO56_02680 NZ_NPMB01000001.1 Protein Homology CDS 515958 516131 . + 0 ID=cds-WP_001563585.1;Parent=gene-CCO56_RS02680;Dbxref=GenBank:WP_001563585.1;Name=WP_001563585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=CCO56_RS02680;product=hypothetical protein;protein_id=WP_001563585.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 516139 518406 . + . ID=gene-CCO56_RS02685;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=CCO56_RS02685;old_locus_tag=CCO56_02685 NZ_NPMB01000001.1 Protein Homology CDS 516139 518406 . + 0 ID=cds-WP_023197259.1;Parent=gene-CCO56_RS02685;Dbxref=GenBank:WP_023197259.1;Name=WP_023197259.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=CCO56_RS02685;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_023197259.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 518498 519406 . - . ID=gene-CCO56_RS02690;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=CCO56_RS02690;old_locus_tag=CCO56_02690 NZ_NPMB01000001.1 Protein Homology CDS 518498 519406 . - 0 ID=cds-WP_001246031.1;Parent=gene-CCO56_RS02690;Dbxref=GenBank:WP_001246031.1;Name=WP_001246031.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=CCO56_RS02690;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246031.1;transl_table=11 NZ_NPMB01000001.1 cmsearch riboswitch 519671 519815 . + . ID=id-NZ_NPMB01000001.1:519671..519815;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMB01000001.1 RefSeq gene 519803 520792 . + . ID=gene-CCO56_RS02695;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CCO56_RS02695;old_locus_tag=CCO56_02695 NZ_NPMB01000001.1 Protein Homology CDS 519803 520792 . + 0 ID=cds-WP_000168180.1;Parent=gene-CCO56_RS02695;Dbxref=GenBank:WP_000168180.1;Name=WP_000168180.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=CCO56_RS02695;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168180.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 520814 521326 . + . ID=gene-CCO56_RS02700;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=CCO56_RS02700;old_locus_tag=CCO56_02700 NZ_NPMB01000001.1 Protein Homology CDS 520814 521326 . + 0 ID=cds-WP_000084604.1;Parent=gene-CCO56_RS02700;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=CCO56_RS02700;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 521329 521814 . + . ID=gene-CCO56_RS02705;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CCO56_RS02705;old_locus_tag=CCO56_02705 NZ_NPMB01000001.1 Protein Homology CDS 521329 521814 . + 0 ID=cds-WP_024155086.1;Parent=gene-CCO56_RS02705;Dbxref=GenBank:WP_024155086.1;Name=WP_024155086.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=CCO56_RS02705;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_024155086.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 521807 522052 . + . ID=gene-CCO56_RS02710;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=CCO56_RS02710;old_locus_tag=CCO56_02710 NZ_NPMB01000001.1 Protein Homology CDS 521807 522052 . + 0 ID=cds-WP_000598600.1;Parent=gene-CCO56_RS02710;Dbxref=GenBank:WP_000598600.1;Name=WP_000598600.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=CCO56_RS02710;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598600.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 522054 522506 . + . ID=gene-CCO56_RS02715;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=CCO56_RS02715;old_locus_tag=CCO56_02715 NZ_NPMB01000001.1 Protein Homology CDS 522054 522506 . + 0 ID=cds-WP_001209386.1;Parent=gene-CCO56_RS02715;Dbxref=GenBank:WP_001209386.1;Name=WP_001209386.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=CCO56_RS02715;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_001209386.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 522554 523258 . + . ID=gene-CCO56_RS02720;Name=CCO56_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02720;old_locus_tag=CCO56_02720 NZ_NPMB01000001.1 Protein Homology CDS 522554 523258 . + 0 ID=cds-WP_000373611.1;Parent=gene-CCO56_RS02720;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=CCO56_RS02720;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 523404 524111 . + . ID=gene-CCO56_RS02730;Name=CCO56_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02730;old_locus_tag=CCO56_02730 NZ_NPMB01000001.1 Protein Homology CDS 523404 524111 . + 0 ID=cds-WP_080177015.1;Parent=gene-CCO56_RS02730;Dbxref=GenBank:WP_080177015.1;Name=WP_080177015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=CCO56_RS02730;product=Bax inhibitor-1 family protein;protein_id=WP_080177015.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 524135 524368 . + . ID=gene-CCO56_RS23620;Name=CCO56_RS23620;end_range=524368,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23620;old_locus_tag=CCO56_02735;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 524135 524368 . + 0 ID=cds-CCO56_RS23620;Parent=gene-CCO56_RS23620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=524368,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=CCO56_RS23620;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 524295 524543 . + . ID=gene-CCO56_RS02740;Name=CCO56_RS02740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS02740;old_locus_tag=CCO56_02740;partial=true;pseudo=true;start_range=.,524295 NZ_NPMB01000001.1 Protein Homology CDS 524295 524543 . + 0 ID=cds-CCO56_RS02740;Parent=gene-CCO56_RS02740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=CCO56_RS02740;partial=true;product=hypothetical protein;pseudo=true;start_range=.,524295;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 524546 525508 . - . ID=gene-CCO56_RS02745;Name=CCO56_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02745;old_locus_tag=CCO56_02745 NZ_NPMB01000001.1 Protein Homology CDS 524546 525508 . - 0 ID=cds-WP_080176990.1;Parent=gene-CCO56_RS02745;Dbxref=GenBank:WP_080176990.1;Name=WP_080176990.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=CCO56_RS02745;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_080176990.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 525508 526749 . - . ID=gene-CCO56_RS02750;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=CCO56_RS02750;old_locus_tag=CCO56_02750 NZ_NPMB01000001.1 Protein Homology CDS 525508 526749 . - 0 ID=cds-WP_000649639.1;Parent=gene-CCO56_RS02750;Dbxref=GenBank:WP_000649639.1;Name=WP_000649639.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=CCO56_RS02750;product=cardiolipin synthase ClsB;protein_id=WP_000649639.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 526746 527504 . - . ID=gene-CCO56_RS02755;Name=CCO56_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02755;old_locus_tag=CCO56_02755 NZ_NPMB01000001.1 Protein Homology CDS 526746 527504 . - 0 ID=cds-WP_000192039.1;Parent=gene-CCO56_RS02755;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=CCO56_RS02755;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 527637 528047 . + . ID=gene-CCO56_RS02760;Name=CCO56_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02760;old_locus_tag=CCO56_02760 NZ_NPMB01000001.1 Protein Homology CDS 527637 528047 . + 0 ID=cds-WP_000871970.1;Parent=gene-CCO56_RS02760;Dbxref=GenBank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=CCO56_RS02760;product=YbhQ family protein;protein_id=WP_000871970.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 528009 529115 . - . ID=gene-CCO56_RS02765;Name=CCO56_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02765;old_locus_tag=CCO56_02765 NZ_NPMB01000001.1 Protein Homology CDS 528009 529115 . - 0 ID=cds-WP_000469050.1;Parent=gene-CCO56_RS02765;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=CCO56_RS02765;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 529231 530361 . - . ID=gene-CCO56_RS02770;Name=CCO56_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02770;old_locus_tag=CCO56_02770 NZ_NPMB01000001.1 Protein Homology CDS 529231 530361 . - 0 ID=cds-WP_000045765.1;Parent=gene-CCO56_RS02770;Dbxref=GenBank:WP_000045765.1;Name=WP_000045765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=CCO56_RS02770;product=ABC transporter permease;protein_id=WP_000045765.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 530354 532090 . - . ID=gene-CCO56_RS02775;Name=CCO56_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02775;old_locus_tag=CCO56_02775 NZ_NPMB01000001.1 Protein Homology CDS 530354 532090 . - 0 ID=cds-WP_001287609.1;Parent=gene-CCO56_RS02775;Dbxref=GenBank:WP_001287609.1;Name=WP_001287609.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=CCO56_RS02775;product=ATP-binding cassette domain-containing protein;protein_id=WP_001287609.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 532083 533078 . - . ID=gene-CCO56_RS02780;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=CCO56_RS02780;old_locus_tag=CCO56_02780 NZ_NPMB01000001.1 Protein Homology CDS 532083 533078 . - 0 ID=cds-WP_000743431.1;Parent=gene-CCO56_RS02780;Dbxref=GenBank:WP_000743431.1;Name=WP_000743431.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=CCO56_RS02780;product=secretion protein HlyD;protein_id=WP_000743431.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 533078 533752 . - . ID=gene-CCO56_RS02785;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=CCO56_RS02785;old_locus_tag=CCO56_02785 NZ_NPMB01000001.1 Protein Homology CDS 533078 533752 . - 0 ID=cds-WP_080176991.1;Parent=gene-CCO56_RS02785;Dbxref=GenBank:WP_080176991.1;Name=WP_080176991.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=CCO56_RS02785;product=transcriptional regulator CecR;protein_id=WP_080176991.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 533982 535343 . + . ID=gene-CCO56_RS02790;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=CCO56_RS02790;old_locus_tag=CCO56_02790 NZ_NPMB01000001.1 Protein Homology CDS 533982 535343 . + 0 ID=cds-WP_080176992.1;Parent=gene-CCO56_RS02790;Dbxref=GenBank:WP_080176992.1;Name=WP_080176992.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=CCO56_RS02790;product=ATP-dependent RNA helicase RhlE;protein_id=WP_080176992.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 535551 537695 . + . ID=gene-CCO56_RS02795;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=CCO56_RS02795;old_locus_tag=CCO56_02795 NZ_NPMB01000001.1 Protein Homology CDS 535551 537695 . + 0 ID=cds-WP_001218630.1;Parent=gene-CCO56_RS02795;Dbxref=GenBank:WP_001218630.1;Name=WP_001218630.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=CCO56_RS02795;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218630.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 537725 538699 . + . ID=gene-CCO56_RS02800;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=CCO56_RS02800;old_locus_tag=CCO56_02800 NZ_NPMB01000001.1 Protein Homology CDS 537725 538699 . + 0 ID=cds-WP_023232774.1;Parent=gene-CCO56_RS02800;Dbxref=GenBank:WP_023232774.1;Name=WP_023232774.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=CCO56_RS02800;product=DNA-binding protein YbiB;protein_id=WP_023232774.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 538855 539115 . - . ID=gene-CCO56_RS02805;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=CCO56_RS02805;old_locus_tag=CCO56_02805 NZ_NPMB01000001.1 Protein Homology CDS 538855 539115 . - 0 ID=cds-WP_000849089.1;Parent=gene-CCO56_RS02805;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=CCO56_RS02805;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 539400 539666 . - . ID=gene-CCO56_RS02810;Name=CCO56_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02810;old_locus_tag=CCO56_02810 NZ_NPMB01000001.1 Protein Homology CDS 539400 539666 . - 0 ID=cds-WP_000146332.1;Parent=gene-CCO56_RS02810;Dbxref=GenBank:WP_000146332.1;Name=WP_000146332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=CCO56_RS02810;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146332.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 539871 540797 . + . ID=gene-CCO56_RS02815;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=CCO56_RS02815;old_locus_tag=CCO56_02815 NZ_NPMB01000001.1 Protein Homology CDS 539871 540797 . + 0 ID=cds-WP_001275974.1;Parent=gene-CCO56_RS02815;Dbxref=GenBank:WP_001275974.1;Name=WP_001275974.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=CCO56_RS02815;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275974.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 540794 543016 . - . ID=gene-CCO56_RS02820;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=CCO56_RS02820;old_locus_tag=CCO56_02820 NZ_NPMB01000001.1 Protein Homology CDS 540794 543016 . - 0 ID=cds-WP_017441938.1;Parent=gene-CCO56_RS02820;Dbxref=GenBank:WP_017441938.1;Name=WP_017441938.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=CCO56_RS02820;product=mechanosensitive channel protein;protein_id=WP_017441938.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 543135 543857 . - . ID=gene-CCO56_RS02825;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=CCO56_RS02825;old_locus_tag=CCO56_02825 NZ_NPMB01000001.1 Protein Homology CDS 543135 543857 . - 0 ID=cds-WP_000569093.1;Parent=gene-CCO56_RS02825;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=CCO56_RS02825;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 543854 544513 . - . ID=gene-CCO56_RS02830;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=CCO56_RS02830;old_locus_tag=CCO56_02830 NZ_NPMB01000001.1 Protein Homology CDS 543854 544513 . - 0 ID=cds-WP_001159076.1;Parent=gene-CCO56_RS02830;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=CCO56_RS02830;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 544659 545405 . - . ID=gene-CCO56_RS02835;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=CCO56_RS02835;old_locus_tag=CCO56_02835 NZ_NPMB01000001.1 Protein Homology CDS 544659 545405 . - 0 ID=cds-WP_001648485.1;Parent=gene-CCO56_RS02835;Dbxref=GenBank:WP_001648485.1;Name=WP_001648485.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=CCO56_RS02835;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_001648485.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 545882 546385 . - . ID=gene-CCO56_RS02840;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=CCO56_RS02840;old_locus_tag=CCO56_02840 NZ_NPMB01000001.1 Protein Homology CDS 545882 546385 . - 0 ID=cds-WP_000100805.1;Parent=gene-CCO56_RS02840;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=CCO56_RS02840;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 546688 547575 . - . ID=gene-CCO56_RS02845;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=CCO56_RS02845;old_locus_tag=CCO56_02845 NZ_NPMB01000001.1 Protein Homology CDS 546688 547575 . - 0 ID=cds-WP_001119555.1;Parent=gene-CCO56_RS02845;Dbxref=GenBank:WP_001119555.1;Name=WP_001119555.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=CCO56_RS02845;product=threonine/homoserine exporter RhtA;protein_id=WP_001119555.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 547929 548444 . + . ID=gene-CCO56_RS02850;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=CCO56_RS02850;old_locus_tag=CCO56_02850 NZ_NPMB01000001.1 Protein Homology CDS 547929 548444 . + 0 ID=cds-WP_000716763.1;Parent=gene-CCO56_RS02850;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=CCO56_RS02850;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 548507 550087 . - . ID=gene-CCO56_RS02855;Name=CCO56_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02855;old_locus_tag=CCO56_02855 NZ_NPMB01000001.1 Protein Homology CDS 548507 550087 . - 0 ID=cds-WP_001089327.1;Parent=gene-CCO56_RS02855;Dbxref=GenBank:WP_001089327.1;Name=WP_001089327.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=CCO56_RS02855;product=phosphoethanolamine transferase;protein_id=WP_001089327.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 550352 550480 . - . ID=gene-CCO56_RS02860;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=CCO56_RS02860;old_locus_tag=CCO56_02860 NZ_NPMB01000001.1 Protein Homology CDS 550352 550480 . - 0 ID=cds-WP_001001755.1;Parent=gene-CCO56_RS02860;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=CCO56_RS02860;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 550666 551139 . + . ID=gene-CCO56_RS02865;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=CCO56_RS02865;old_locus_tag=CCO56_02865 NZ_NPMB01000001.1 Protein Homology CDS 550666 551139 . + 0 ID=cds-WP_094882030.1;Parent=gene-CCO56_RS02865;Dbxref=GenBank:WP_094882030.1;Name=WP_094882030.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=CCO56_RS02865;product=manganese-binding transcriptional regulator MntR;protein_id=WP_094882030.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 551136 552248 . + . ID=gene-CCO56_RS02870;Name=CCO56_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02870;old_locus_tag=CCO56_02870 NZ_NPMB01000001.1 Protein Homology CDS 551136 552248 . + 0 ID=cds-WP_080176993.1;Parent=gene-CCO56_RS02870;Dbxref=GenBank:WP_080176993.1;Name=WP_080176993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=CCO56_RS02870;product=anion transporter;protein_id=WP_080176993.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 552292 553212 . - . ID=gene-CCO56_RS02875;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=CCO56_RS02875;old_locus_tag=CCO56_02875 NZ_NPMB01000001.1 Protein Homology CDS 552292 553212 . - 0 ID=cds-WP_001056404.1;Parent=gene-CCO56_RS02875;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=CCO56_RS02875;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 553432 555027 . + . ID=gene-CCO56_RS02880;Name=CCO56_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02880;old_locus_tag=CCO56_02880 NZ_NPMB01000001.1 Protein Homology CDS 553432 555027 . + 0 ID=cds-WP_080176994.1;Parent=gene-CCO56_RS02880;Dbxref=GenBank:WP_080176994.1;Name=WP_080176994.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=CCO56_RS02880;product=ABC-F family ATPase;protein_id=WP_080176994.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 555149 556414 . - . ID=gene-CCO56_RS02885;Name=CCO56_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02885;old_locus_tag=CCO56_02885 NZ_NPMB01000001.1 Protein Homology CDS 555149 556414 . - 0 ID=cds-WP_000210951.1;Parent=gene-CCO56_RS02885;Dbxref=GenBank:WP_000210951.1;Name=WP_000210951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=CCO56_RS02885;product=DUF1479 domain-containing protein;protein_id=WP_000210951.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 556676 557485 . + . ID=gene-CCO56_RS02890;Name=CCO56_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02890;old_locus_tag=CCO56_02890 NZ_NPMB01000001.1 Protein Homology CDS 556676 557485 . + 0 ID=cds-WP_000217907.1;Parent=gene-CCO56_RS02890;Dbxref=GenBank:WP_000217907.1;Name=WP_000217907.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=CCO56_RS02890;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217907.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 557563 559995 . - . ID=gene-CCO56_RS02895;Name=CCO56_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02895;old_locus_tag=CCO56_02895 NZ_NPMB01000001.1 Protein Homology CDS 557563 559995 . - 0 ID=cds-WP_000192667.1;Parent=gene-CCO56_RS02895;Dbxref=GenBank:WP_000192667.1;Name=WP_000192667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=CCO56_RS02895;product=glycyl radical protein;protein_id=WP_000192667.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 560001 560900 . - . ID=gene-CCO56_RS02900;Name=CCO56_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02900;old_locus_tag=CCO56_02900 NZ_NPMB01000001.1 Protein Homology CDS 560001 560900 . - 0 ID=cds-WP_079826684.1;Parent=gene-CCO56_RS02900;Dbxref=GenBank:WP_079826684.1;Name=WP_079826684.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=CCO56_RS02900;product=glycyl-radical enzyme activating protein;protein_id=WP_079826684.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 561178 561927 . - . ID=gene-CCO56_RS02905;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=CCO56_RS02905;old_locus_tag=CCO56_02905 NZ_NPMB01000001.1 Protein Homology CDS 561178 561927 . - 0 ID=cds-WP_000829280.1;Parent=gene-CCO56_RS02905;Dbxref=GenBank:WP_000829280.1;Name=WP_000829280.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=CCO56_RS02905;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829280.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 561927 563162 . - . ID=gene-CCO56_RS02910;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=CCO56_RS02910;old_locus_tag=CCO56_02910 NZ_NPMB01000001.1 Protein Homology CDS 561927 563162 . - 0 ID=cds-WP_000395801.1;Parent=gene-CCO56_RS02910;Dbxref=GenBank:WP_000395801.1;Name=WP_000395801.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=CCO56_RS02910;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000395801.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 563366 564307 . + . ID=gene-CCO56_RS02915;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=CCO56_RS02915;old_locus_tag=CCO56_02915 NZ_NPMB01000001.1 Protein Homology CDS 563366 564307 . + 0 ID=cds-WP_001030503.1;Parent=gene-CCO56_RS02915;Dbxref=GenBank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=CCO56_RS02915;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 564318 566189 . + . ID=gene-CCO56_RS02920;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=CCO56_RS02920;old_locus_tag=CCO56_02920 NZ_NPMB01000001.1 Protein Homology CDS 564318 566189 . + 0 ID=cds-WP_001120575.1;Parent=gene-CCO56_RS02920;Dbxref=GenBank:WP_001120575.1;Name=WP_001120575.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=CCO56_RS02920;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120575.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 566222 567760 . + . ID=gene-CCO56_RS02925;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=CCO56_RS02925;old_locus_tag=CCO56_02925 NZ_NPMB01000001.1 Protein Homology CDS 566222 567760 . + 0 ID=cds-WP_000191439.1;Parent=gene-CCO56_RS02925;Dbxref=GenBank:WP_000191439.1;Name=WP_000191439.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=CCO56_RS02925;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191439.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 567821 568741 . + . ID=gene-CCO56_RS02930;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=CCO56_RS02930;old_locus_tag=CCO56_02930 NZ_NPMB01000001.1 Protein Homology CDS 567821 568741 . + 0 ID=cds-WP_000936069.1;Parent=gene-CCO56_RS02930;Dbxref=GenBank:WP_000936069.1;Name=WP_000936069.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=CCO56_RS02930;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936069.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 568744 569655 . + . ID=gene-CCO56_RS02935;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=CCO56_RS02935;old_locus_tag=CCO56_02935 NZ_NPMB01000001.1 Protein Homology CDS 568744 569655 . + 0 ID=cds-WP_001236024.1;Parent=gene-CCO56_RS02935;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=CCO56_RS02935;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 569746 571071 . - . ID=gene-CCO56_RS02940;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CCO56_RS02940;old_locus_tag=CCO56_02940 NZ_NPMB01000001.1 Protein Homology CDS 569746 571071 . - 0 ID=cds-WP_000073314.1;Parent=gene-CCO56_RS02940;Dbxref=GenBank:WP_000073314.1;Name=WP_000073314.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=CCO56_RS02940;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073314.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 571302 571685 . + . ID=gene-CCO56_RS02945;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=CCO56_RS02945;old_locus_tag=CCO56_02945 NZ_NPMB01000001.1 Protein Homology CDS 571302 571685 . + 0 ID=cds-WP_000259651.1;Parent=gene-CCO56_RS02945;Dbxref=GenBank:WP_000259651.1;Name=WP_000259651.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=CCO56_RS02945;product=biofilm formation regulator BssR;protein_id=WP_000259651.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 571788 572073 . + . ID=gene-CCO56_RS23625;Name=CCO56_RS23625;end_range=572073,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23625;old_locus_tag=CCO56_02950;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 571788 572073 . + 0 ID=cds-CCO56_RS23625;Parent=gene-CCO56_RS23625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=572073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=CCO56_RS23625;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 572399 572914 . + . ID=gene-CCO56_RS02955;Name=CCO56_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02955;old_locus_tag=CCO56_02955 NZ_NPMB01000001.1 Protein Homology CDS 572399 572914 . + 0 ID=cds-WP_001521476.1;Parent=gene-CCO56_RS02955;Dbxref=GenBank:WP_001521476.1;Name=WP_001521476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=CCO56_RS02955;product=STM0854 family CoA ester lyase;protein_id=WP_001521476.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 572937 573686 . + . ID=gene-CCO56_RS02960;Name=CCO56_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02960;old_locus_tag=CCO56_02960 NZ_NPMB01000001.1 Protein Homology CDS 572937 573686 . + 0 ID=cds-WP_336603265.1;Parent=gene-CCO56_RS02960;Dbxref=GenBank:WP_336603265.1;Name=WP_336603265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003461132.1;locus_tag=CCO56_RS02960;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_336603265.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 573697 574650 . + . ID=gene-CCO56_RS02965;Name=CCO56_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02965;old_locus_tag=CCO56_02965 NZ_NPMB01000001.1 Protein Homology CDS 573697 574650 . + 0 ID=cds-WP_000157772.1;Parent=gene-CCO56_RS02965;Dbxref=GenBank:WP_000157772.1;Name=WP_000157772.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=CCO56_RS02965;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_000157772.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 574683 574946 . + . ID=gene-CCO56_RS02970;Name=CCO56_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02970;old_locus_tag=CCO56_02970 NZ_NPMB01000001.1 GeneMarkS-2+ CDS 574683 574946 . + 0 ID=cds-WP_001528824.1;Parent=gene-CCO56_RS02970;Dbxref=GenBank:WP_001528824.1;Name=WP_001528824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS02970;product=hypothetical protein;protein_id=WP_001528824.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 574943 576106 . + . ID=gene-CCO56_RS02975;Name=CCO56_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02975;old_locus_tag=CCO56_02975 NZ_NPMB01000001.1 Protein Homology CDS 574943 576106 . + 0 ID=cds-WP_080176996.1;Parent=gene-CCO56_RS02975;Dbxref=GenBank:WP_080176996.1;Name=WP_080176996.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=CCO56_RS02975;product=acyl-CoA dehydrogenase family protein;protein_id=WP_080176996.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 576555 578240 . + . ID=gene-CCO56_RS02980;Name=CCO56_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02980;old_locus_tag=CCO56_02980 NZ_NPMB01000001.1 Protein Homology CDS 576555 578240 . + 0 ID=cds-WP_001000306.1;Parent=gene-CCO56_RS02980;Dbxref=GenBank:WP_001000306.1;Name=WP_001000306.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=CCO56_RS02980;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_001000306.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 578246 579136 . - . ID=gene-CCO56_RS02985;Name=CCO56_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02985;old_locus_tag=CCO56_02985 NZ_NPMB01000001.1 Protein Homology CDS 578246 579136 . - 0 ID=cds-WP_000545335.1;Parent=gene-CCO56_RS02985;Dbxref=GenBank:WP_000545335.1;Name=WP_000545335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=CCO56_RS02985;product=LysR family transcriptional regulator;protein_id=WP_000545335.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 579401 579826 . - . ID=gene-CCO56_RS02990;Name=CCO56_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS02990;old_locus_tag=CCO56_02990 NZ_NPMB01000001.1 Protein Homology CDS 579401 579826 . - 0 ID=cds-WP_000287110.1;Parent=gene-CCO56_RS02990;Dbxref=GenBank:WP_000287110.1;Name=WP_000287110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=CCO56_RS02990;product=GntP family permease;protein_id=WP_000287110.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 580173 580376 . + . ID=gene-CCO56_RS24045;Name=CCO56_RS24045;end_range=580376,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24045;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 580173 580376 . + 0 ID=cds-CCO56_RS24045;Parent=gene-CCO56_RS24045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=580376,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=CCO56_RS24045;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 580362 580864 . + . ID=gene-CCO56_RS24050;Name=CCO56_RS24050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24050;partial=true;pseudo=true;start_range=.,580362 NZ_NPMB01000001.1 Protein Homology CDS 580362 580864 . + 0 ID=cds-CCO56_RS24050;Parent=gene-CCO56_RS24050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000554957.1;locus_tag=CCO56_RS24050;partial=true;product=PQQ-dependent sugar dehydrogenase;pseudo=true;start_range=.,580362;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 580861 581487 . - . ID=gene-CCO56_RS03005;Name=CCO56_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03005;old_locus_tag=CCO56_03005 NZ_NPMB01000001.1 Protein Homology CDS 580861 581487 . - 0 ID=cds-WP_000631907.1;Parent=gene-CCO56_RS03005;Dbxref=GenBank:WP_000631907.1;Name=WP_000631907.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=CCO56_RS03005;product=glutathione S-transferase family protein;protein_id=WP_000631907.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 581731 582933 . + . ID=gene-CCO56_RS03010;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=CCO56_RS03010;old_locus_tag=CCO56_03010 NZ_NPMB01000001.1 Protein Homology CDS 581731 582933 . + 0 ID=cds-WP_080176997.1;Parent=gene-CCO56_RS03010;Dbxref=GenBank:WP_080176997.1;Name=WP_080176997.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=CCO56_RS03010;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_080176997.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 582978 583736 . - . ID=gene-CCO56_RS03015;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=CCO56_RS03015;old_locus_tag=CCO56_03015 NZ_NPMB01000001.1 Protein Homology CDS 582978 583736 . - 0 ID=cds-WP_000450106.1;Parent=gene-CCO56_RS03015;Dbxref=GenBank:WP_000450106.1;Name=WP_000450106.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=CCO56_RS03015;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450106.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 583808 584416 . - . ID=gene-CCO56_RS03020;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=CCO56_RS03020;old_locus_tag=CCO56_03020 NZ_NPMB01000001.1 Protein Homology CDS 583808 584416 . - 0 ID=cds-WP_001531378.1;Parent=gene-CCO56_RS03020;Dbxref=GenBank:WP_001531378.1;Name=WP_001531378.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=CCO56_RS03020;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001531378.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 584729 585961 . + . ID=gene-CCO56_RS03025;Name=CCO56_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03025;old_locus_tag=CCO56_03025 NZ_NPMB01000001.1 Protein Homology CDS 584729 585961 . + 0 ID=cds-WP_001181284.1;Parent=gene-CCO56_RS03025;Dbxref=GenBank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=CCO56_RS03025;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 586015 586830 . - . ID=gene-CCO56_RS03030;Name=CCO56_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03030;old_locus_tag=CCO56_03030 NZ_NPMB01000001.1 Protein Homology CDS 586015 586830 . - 0 ID=cds-WP_000023542.1;Parent=gene-CCO56_RS03030;Dbxref=GenBank:WP_000023542.1;Name=WP_000023542.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=CCO56_RS03030;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000023542.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 586827 588038 . - . ID=gene-CCO56_RS03035;Name=CCO56_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03035;old_locus_tag=CCO56_03035 NZ_NPMB01000001.1 Protein Homology CDS 586827 588038 . - 0 ID=cds-WP_000217430.1;Parent=gene-CCO56_RS03035;Dbxref=GenBank:WP_000217430.1;Name=WP_000217430.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=CCO56_RS03035;product=MFS transporter;protein_id=WP_000217430.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 588206 588832 . + . ID=gene-CCO56_RS03040;Name=CCO56_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03040;old_locus_tag=CCO56_03040 NZ_NPMB01000001.1 Protein Homology CDS 588206 588832 . + 0 ID=cds-WP_017465778.1;Parent=gene-CCO56_RS03040;Dbxref=GenBank:WP_017465778.1;Name=WP_017465778.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835383.1;locus_tag=CCO56_RS03040;product=TetR/AcrR family transcriptional regulator;protein_id=WP_017465778.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 588873 589925 . - . ID=gene-CCO56_RS23940;Name=CCO56_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23940;old_locus_tag=CCO56_03045 NZ_NPMB01000001.1 Protein Homology CDS 588873 589925 . - 0 ID=cds-WP_053530343.1;Parent=gene-CCO56_RS23940;Dbxref=GenBank:WP_053530343.1;Name=WP_053530343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001544402.1;locus_tag=CCO56_RS23940;product=phage integrase;protein_id=WP_053530343.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 590005 590376 . - . ID=gene-CCO56_RS03050;Name=CCO56_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03050;old_locus_tag=CCO56_03050 NZ_NPMB01000001.1 Protein Homology CDS 590005 590376 . - 0 ID=cds-WP_039029588.1;Parent=gene-CCO56_RS03050;Dbxref=GenBank:WP_039029588.1;Name=WP_039029588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000866322.1;locus_tag=CCO56_RS03050;product=ASCH domain-containing protein;protein_id=WP_039029588.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 590354 591427 . - . ID=gene-CCO56_RS03055;Name=CCO56_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03055;old_locus_tag=CCO56_03055 NZ_NPMB01000001.1 Protein Homology CDS 590354 591427 . - 0 ID=cds-WP_053530344.1;Parent=gene-CCO56_RS03055;Dbxref=GenBank:WP_053530344.1;Name=WP_053530344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007848779.1;locus_tag=CCO56_RS03055;product=hypothetical protein;protein_id=WP_053530344.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 591438 592022 . - . ID=gene-CCO56_RS03060;Name=CCO56_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03060;old_locus_tag=CCO56_03060 NZ_NPMB01000001.1 Protein Homology CDS 591438 592022 . - 0 ID=cds-WP_053530345.1;Parent=gene-CCO56_RS03060;Dbxref=GenBank:WP_053530345.1;Name=WP_053530345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134682.1;locus_tag=CCO56_RS03060;product=hypothetical protein;protein_id=WP_053530345.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 592034 592594 . - . ID=gene-CCO56_RS03065;Name=CCO56_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03065;old_locus_tag=CCO56_03065 NZ_NPMB01000001.1 Protein Homology CDS 592034 592594 . - 0 ID=cds-WP_053530346.1;Parent=gene-CCO56_RS03065;Dbxref=GenBank:WP_053530346.1;Name=WP_053530346.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223865.1;locus_tag=CCO56_RS03065;product=phage repressor protein CI;protein_id=WP_053530346.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 592720 592941 . + . ID=gene-CCO56_RS03070;Name=CCO56_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03070;old_locus_tag=CCO56_03070 NZ_NPMB01000001.1 Protein Homology CDS 592720 592941 . + 0 ID=cds-WP_053530347.1;Parent=gene-CCO56_RS03070;Dbxref=GenBank:WP_053530347.1;Name=WP_053530347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247705.1;locus_tag=CCO56_RS03070;product=hypothetical protein;protein_id=WP_053530347.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 592974 593483 . + . ID=gene-CCO56_RS03075;Name=CCO56_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03075;old_locus_tag=CCO56_03075 NZ_NPMB01000001.1 Protein Homology CDS 592974 593483 . + 0 ID=cds-WP_053530348.1;Parent=gene-CCO56_RS03075;Dbxref=GenBank:WP_053530348.1;Name=WP_053530348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461663.1;locus_tag=CCO56_RS03075;product=phage regulatory CII family protein;protein_id=WP_053530348.1;transl_table=11 NZ_NPMB01000001.1 RefSeq pseudogene 593491 593646 . + . ID=gene-CCO56_RS24055;Name=CCO56_RS24055;end_range=593646,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24055;partial=true;pseudo=true NZ_NPMB01000001.1 Protein Homology CDS 593491 593646 . + 0 ID=cds-CCO56_RS24055;Parent=gene-CCO56_RS24055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=593646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001504054.1;locus_tag=CCO56_RS24055;partial=true;product=phage filamentation protein Fil family protein;pseudo=true;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 593658 593882 . + . ID=gene-CCO56_RS24060;Name=CCO56_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24060 NZ_NPMB01000001.1 Protein Homology CDS 593658 593882 . + 0 ID=cds-WP_053530349.1;Parent=gene-CCO56_RS24060;Dbxref=GenBank:WP_053530349.1;Name=WP_053530349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232540.1;locus_tag=CCO56_RS24060;product=hypothetical protein;protein_id=WP_053530349.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 593905 594246 . + . ID=gene-CCO56_RS03085;Name=CCO56_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03085;old_locus_tag=CCO56_03085 NZ_NPMB01000001.1 Protein Homology CDS 593905 594246 . + 0 ID=cds-WP_000996717.1;Parent=gene-CCO56_RS03085;Dbxref=GenBank:WP_000996717.1;Name=WP_000996717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461660.1;locus_tag=CCO56_RS03085;product=DUF5347 domain-containing protein;protein_id=WP_000996717.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 594314 594547 . + . ID=gene-CCO56_RS03090;Name=CCO56_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03090;old_locus_tag=CCO56_03090 NZ_NPMB01000001.1 Protein Homology CDS 594314 594547 . + 0 ID=cds-WP_001244228.1;Parent=gene-CCO56_RS03090;Dbxref=GenBank:WP_001244228.1;Name=WP_001244228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461659.1;locus_tag=CCO56_RS03090;product=DUF2732 family protein;protein_id=WP_001244228.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 594547 594774 . + . ID=gene-CCO56_RS03095;Name=CCO56_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03095;old_locus_tag=CCO56_03095 NZ_NPMB01000001.1 Protein Homology CDS 594547 594774 . + 0 ID=cds-WP_016529330.1;Parent=gene-CCO56_RS03095;Dbxref=GenBank:WP_016529330.1;Name=WP_016529330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461658.1;locus_tag=CCO56_RS03095;product=TraR/DksA family transcriptional regulator;protein_id=WP_016529330.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 594771 595628 . + . ID=gene-CCO56_RS03100;Name=CCO56_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03100;old_locus_tag=CCO56_03100 NZ_NPMB01000001.1 Protein Homology CDS 594771 595628 . + 0 ID=cds-WP_053530350.1;Parent=gene-CCO56_RS03100;Dbxref=GenBank:WP_053530350.1;Name=WP_053530350.1;Ontology_term=GO:0032259,GO:0032775,GO:0008757,GO:0009007,GO:0043565,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,sequence-specific DNA binding|0043565||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA,obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104187.1;locus_tag=CCO56_RS03100;product=DNA adenine methylase;protein_id=WP_053530350.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 595625 598039 . + . ID=gene-CCO56_RS03105;Name=CCO56_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03105;old_locus_tag=CCO56_03105 NZ_NPMB01000001.1 Protein Homology CDS 595625 598039 . + 0 ID=cds-WP_080176998.1;Parent=gene-CCO56_RS03105;Dbxref=GenBank:WP_080176998.1;Name=WP_080176998.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017528.1;locus_tag=CCO56_RS03105;product=replication endonuclease;protein_id=WP_080176998.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 598192 598380 . + . ID=gene-CCO56_RS03110;Name=CCO56_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03110;old_locus_tag=CCO56_03110 NZ_NPMB01000001.1 Protein Homology CDS 598192 598380 . + 0 ID=cds-WP_001154434.1;Parent=gene-CCO56_RS03110;Dbxref=GenBank:WP_001154434.1;Name=WP_001154434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226015.1;locus_tag=CCO56_RS03110;product=hypothetical protein;protein_id=WP_001154434.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 598391 598624 . + . ID=gene-CCO56_RS03115;Name=CCO56_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03115;old_locus_tag=CCO56_03115 NZ_NPMB01000001.1 Protein Homology CDS 598391 598624 . + 0 ID=cds-WP_001217575.1;Parent=gene-CCO56_RS03115;Dbxref=GenBank:WP_001217575.1;Name=WP_001217575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226016.1;locus_tag=CCO56_RS03115;product=DinI-like family protein;protein_id=WP_001217575.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 598975 599544 . + . ID=gene-CCO56_RS03120;Name=CCO56_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03120;old_locus_tag=CCO56_03120 NZ_NPMB01000001.1 Protein Homology CDS 598975 599544 . + 0 ID=cds-WP_016245841.1;Parent=gene-CCO56_RS03120;Dbxref=GenBank:WP_016245841.1;Name=WP_016245841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245841.1;locus_tag=CCO56_RS03120;product=phosphoribosyltransferase;protein_id=WP_016245841.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 599549 600511 . + . ID=gene-CCO56_RS03125;Name=CCO56_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03125;old_locus_tag=CCO56_03125 NZ_NPMB01000001.1 Protein Homology CDS 599549 600511 . + 0 ID=cds-WP_000553634.1;Parent=gene-CCO56_RS03125;Dbxref=GenBank:WP_000553634.1;Name=WP_000553634.1;Ontology_term=GO:0009294,GO:1990814;gbkey=CDS;go_function=DNA/DNA annealing activity|1990814||IEA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001581549.1;locus_tag=CCO56_RS03125;product=DNA-processing protein DprA;protein_id=WP_000553634.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 600537 601568 . - . ID=gene-CCO56_RS03130;Name=CCO56_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03130;old_locus_tag=CCO56_03130 NZ_NPMB01000001.1 Protein Homology CDS 600537 601568 . - 0 ID=cds-WP_000520376.1;Parent=gene-CCO56_RS03130;Dbxref=GenBank:WP_000520376.1;Name=WP_000520376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657250.1;locus_tag=CCO56_RS03130;product=phage portal protein;protein_id=WP_000520376.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 601568 603334 . - . ID=gene-CCO56_RS03135;Name=CCO56_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03135;old_locus_tag=CCO56_03135 NZ_NPMB01000001.1 Protein Homology CDS 601568 603334 . - 0 ID=cds-WP_080176999.1;Parent=gene-CCO56_RS03135;Dbxref=GenBank:WP_080176999.1;Name=WP_080176999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226020.1;locus_tag=CCO56_RS03135;product=terminase ATPase subunit family protein;protein_id=WP_080176999.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 603477 604310 . + . ID=gene-CCO56_RS03140;Name=CCO56_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03140;old_locus_tag=CCO56_03140 NZ_NPMB01000001.1 Protein Homology CDS 603477 604310 . + 0 ID=cds-WP_000216242.1;Parent=gene-CCO56_RS03140;Dbxref=GenBank:WP_000216242.1;Name=WP_000216242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226021.1;locus_tag=CCO56_RS03140;product=GPO family capsid scaffolding protein;protein_id=WP_000216242.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 604327 605385 . + . ID=gene-CCO56_RS03145;Name=CCO56_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03145;old_locus_tag=CCO56_03145 NZ_NPMB01000001.1 Protein Homology CDS 604327 605385 . + 0 ID=cds-WP_000742511.1;Parent=gene-CCO56_RS03145;Dbxref=GenBank:WP_000742511.1;Name=WP_000742511.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226022.1;locus_tag=CCO56_RS03145;product=phage major capsid protein%2C P2 family;protein_id=WP_000742511.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 605389 606039 . + . ID=gene-CCO56_RS03150;Name=CCO56_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03150;old_locus_tag=CCO56_03150 NZ_NPMB01000001.1 Protein Homology CDS 605389 606039 . + 0 ID=cds-WP_080177000.1;Parent=gene-CCO56_RS03150;Dbxref=GenBank:WP_080177000.1;Name=WP_080177000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226023.1;locus_tag=CCO56_RS03150;product=terminase endonuclease subunit;protein_id=WP_080177000.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 606135 606599 . + . ID=gene-CCO56_RS03155;Name=CCO56_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03155;old_locus_tag=CCO56_03155 NZ_NPMB01000001.1 Protein Homology CDS 606135 606599 . + 0 ID=cds-WP_000673523.1;Parent=gene-CCO56_RS03155;Dbxref=GenBank:WP_000673523.1;Name=WP_000673523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226024.1;locus_tag=CCO56_RS03155;product=head completion/stabilization protein;protein_id=WP_000673523.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 606599 606802 . + . ID=gene-CCO56_RS03160;Name=CCO56_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03160;old_locus_tag=CCO56_03160 NZ_NPMB01000001.1 Protein Homology CDS 606599 606802 . + 0 ID=cds-WP_000868175.1;Parent=gene-CCO56_RS03160;Dbxref=GenBank:WP_000868175.1;Name=WP_000868175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461645.1;locus_tag=CCO56_RS03160;product=tail protein X;protein_id=WP_000868175.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 606806 607021 . + . ID=gene-CCO56_RS03165;Name=CCO56_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03165;old_locus_tag=CCO56_03165 NZ_NPMB01000001.1 Protein Homology CDS 606806 607021 . + 0 ID=cds-WP_000171568.1;Parent=gene-CCO56_RS03165;Dbxref=GenBank:WP_000171568.1;Name=WP_000171568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461644.1;locus_tag=CCO56_RS03165;product=HP1 family phage holin;protein_id=WP_000171568.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 607002 607517 . + . ID=gene-CCO56_RS03170;Name=CCO56_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03170;old_locus_tag=CCO56_03170 NZ_NPMB01000001.1 Protein Homology CDS 607002 607517 . + 0 ID=cds-WP_160467085.1;Parent=gene-CCO56_RS03170;Dbxref=GenBank:WP_160467085.1;Name=WP_160467085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069910.1;locus_tag=CCO56_RS03170;product=lysozyme;protein_id=WP_160467085.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 607514 607942 . + . ID=gene-CCO56_RS03175;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=CCO56_RS03175;old_locus_tag=CCO56_03175 NZ_NPMB01000001.1 Protein Homology CDS 607514 607942 . + 0 ID=cds-WP_000196197.1;Parent=gene-CCO56_RS03175;Dbxref=GenBank:WP_000196197.1;Name=WP_000196197.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341071.1;locus_tag=CCO56_RS03175;product=Rz-like lysis system protein LysB;protein_id=WP_000196197.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 607827 608075 . + . ID=gene-CCO56_RS23650;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO56_RS23650;old_locus_tag=CCO56_03180 NZ_NPMB01000001.1 Protein Homology CDS 607827 608075 . + 0 ID=cds-WP_237219584.1;Parent=gene-CCO56_RS23650;Dbxref=GenBank:WP_237219584.1;Name=WP_237219584.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461641.1;locus_tag=CCO56_RS23650;product=Rz1-like lysis system protein LysC;protein_id=WP_237219584.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 608038 608469 . + . ID=gene-CCO56_RS03185;Name=CCO56_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03185;old_locus_tag=CCO56_03185 NZ_NPMB01000001.1 Protein Homology CDS 608038 608469 . + 0 ID=cds-WP_080177001.1;Parent=gene-CCO56_RS03185;Dbxref=GenBank:WP_080177001.1;Name=WP_080177001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461640.1;locus_tag=CCO56_RS03185;product=phage tail protein;protein_id=WP_080177001.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 608462 608911 . + . ID=gene-CCO56_RS03190;Name=CCO56_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03190;old_locus_tag=CCO56_03190 NZ_NPMB01000001.1 Protein Homology CDS 608462 608911 . + 0 ID=cds-WP_000829112.1;Parent=gene-CCO56_RS03190;Dbxref=GenBank:WP_000829112.1;Name=WP_000829112.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829112.1;locus_tag=CCO56_RS03190;product=phage virion morphogenesis protein;protein_id=WP_000829112.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 608929 609312 . + . ID=gene-CCO56_RS03195;Name=CCO56_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03195;old_locus_tag=CCO56_03195 NZ_NPMB01000001.1 GeneMarkS-2+ CDS 608929 609312 . + 0 ID=cds-WP_001183830.1;Parent=gene-CCO56_RS03195;Dbxref=GenBank:WP_001183830.1;Name=WP_001183830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS03195;product=hypothetical protein;protein_id=WP_001183830.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 609287 610501 . + . ID=gene-CCO56_RS03200;Name=CCO56_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03200;old_locus_tag=CCO56_03200 NZ_NPMB01000001.1 Protein Homology CDS 609287 610501 . + 0 ID=cds-WP_080177002.1;Parent=gene-CCO56_RS03200;Dbxref=GenBank:WP_080177002.1;Name=WP_080177002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870373.1;locus_tag=CCO56_RS03200;product=PcfJ domain-containing protein;protein_id=WP_080177002.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 610576 611154 . + . ID=gene-CCO56_RS03205;Name=CCO56_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03205;old_locus_tag=CCO56_03205 NZ_NPMB01000001.1 Protein Homology CDS 610576 611154 . + 0 ID=cds-WP_080177003.1;Parent=gene-CCO56_RS03205;Dbxref=GenBank:WP_080177003.1;Name=WP_080177003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461638.1;locus_tag=CCO56_RS03205;product=phage baseplate assembly protein V;protein_id=WP_080177003.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 611151 611510 . + . ID=gene-CCO56_RS03210;Name=CCO56_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03210;old_locus_tag=CCO56_03210 NZ_NPMB01000001.1 Protein Homology CDS 611151 611510 . + 0 ID=cds-WP_080177004.1;Parent=gene-CCO56_RS03210;Dbxref=GenBank:WP_080177004.1;Name=WP_080177004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098787.1;locus_tag=CCO56_RS03210;product=GPW/gp25 family protein;protein_id=WP_080177004.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 611497 612405 . + . ID=gene-CCO56_RS03215;Name=CCO56_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03215;old_locus_tag=CCO56_03215 NZ_NPMB01000001.1 Protein Homology CDS 611497 612405 . + 0 ID=cds-WP_080177005.1;Parent=gene-CCO56_RS03215;Dbxref=GenBank:WP_080177005.1;Name=WP_080177005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=CCO56_RS03215;product=baseplate assembly protein;protein_id=WP_080177005.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 612398 613003 . + . ID=gene-CCO56_RS03220;Name=CCO56_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03220;old_locus_tag=CCO56_03220 NZ_NPMB01000001.1 Protein Homology CDS 612398 613003 . + 0 ID=cds-WP_001086833.1;Parent=gene-CCO56_RS03220;Dbxref=GenBank:WP_001086833.1;Name=WP_001086833.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=CCO56_RS03220;product=phage tail protein I;protein_id=WP_001086833.1;transl_table=11 NZ_NPMB01000001.1 RefSeq gene 613000 614174 . + . ID=gene-CCO56_RS03225;Name=CCO56_RS03225;end_range=614174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03225;old_locus_tag=CCO56_03225;partial=true NZ_NPMB01000001.1 Protein Homology CDS 613000 614174 . + 0 ID=cds-WP_094882032.1;Parent=gene-CCO56_RS03225;Dbxref=GenBank:WP_094882032.1;Name=WP_094882032.1;end_range=614174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001498270.1;locus_tag=CCO56_RS03225;partial=true;product=phage tail protein;protein_id=WP_094882032.1;transl_table=11 ##sequence-region NZ_NPMB01000010.1 1 172691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000010.1 RefSeq region 1 172691 . + . ID=NZ_NPMB01000010.1:1..172691;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000010.1 RefSeq gene 1 127 . - . ID=gene-CCO56_RS18845;Name=CCO56_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18845;old_locus_tag=CCO56_18835;partial=true;start_range=.,1 NZ_NPMB01000010.1 Protein Homology CDS 1 127 . - 0 ID=cds-WP_001708769.1;Parent=gene-CCO56_RS18845;Dbxref=GenBank:WP_001708769.1;Name=WP_001708769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO56_RS18845;partial=true;product=4Fe-4S binding protein;protein_id=WP_001708769.1;start_range=.,1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 138 2573 . - . ID=gene-CCO56_RS18850;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=CCO56_RS18850;old_locus_tag=CCO56_18840 NZ_NPMB01000010.1 Protein Homology CDS 138 2573 . - 0 ID=cds-WP_023223296.1;Parent=gene-CCO56_RS18850;Dbxref=GenBank:WP_023223296.1;Name=WP_023223296.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=CCO56_RS18850;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_023223296.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 2672 5110 . - . ID=gene-CCO56_RS18855;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=CCO56_RS18855;old_locus_tag=CCO56_18845 NZ_NPMB01000010.1 Protein Homology CDS 2672 5110 . - 0 ID=cds-WP_023263094.1;Parent=gene-CCO56_RS18855;Dbxref=GenBank:WP_023263094.1;Name=WP_023263094.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=CCO56_RS18855;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_023263094.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 5267 5575 . - . ID=gene-CCO56_RS18860;Name=CCO56_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18860;old_locus_tag=CCO56_18850 NZ_NPMB01000010.1 Protein Homology CDS 5267 5575 . - 0 ID=cds-WP_000975516.1;Parent=gene-CCO56_RS18860;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=CCO56_RS18860;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 5679 6389 . + . ID=gene-CCO56_RS18865;Name=CCO56_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18865;old_locus_tag=CCO56_18855 NZ_NPMB01000010.1 Protein Homology CDS 5679 6389 . + 0 ID=cds-WP_000743122.1;Parent=gene-CCO56_RS18865;Dbxref=GenBank:WP_000743122.1;Name=WP_000743122.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=CCO56_RS18865;product=YnfC family lipoprotein;protein_id=WP_000743122.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 6430 6990 . - . ID=gene-CCO56_RS18870;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=CCO56_RS18870;old_locus_tag=CCO56_18860 NZ_NPMB01000010.1 Protein Homology CDS 6430 6990 . - 0 ID=cds-WP_000199997.1;Parent=gene-CCO56_RS18870;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=CCO56_RS18870;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 7026 7367 . - . ID=gene-CCO56_RS18875;Name=CCO56_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18875;old_locus_tag=CCO56_18865 NZ_NPMB01000010.1 Protein Homology CDS 7026 7367 . - 0 ID=cds-WP_001066440.1;Parent=gene-CCO56_RS18875;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=CCO56_RS18875;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 7520 7846 . + . ID=gene-CCO56_RS18880;Name=CCO56_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18880;old_locus_tag=CCO56_18870 NZ_NPMB01000010.1 Protein Homology CDS 7520 7846 . + 0 ID=cds-WP_000921389.1;Parent=gene-CCO56_RS18880;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=CCO56_RS18880;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 7968 9182 . + . ID=gene-CCO56_RS18885;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=CCO56_RS18885;old_locus_tag=CCO56_18875 NZ_NPMB01000010.1 Protein Homology CDS 7968 9182 . + 0 ID=cds-WP_001644449.1;Parent=gene-CCO56_RS18885;Dbxref=GenBank:WP_001644449.1;Name=WP_001644449.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=CCO56_RS18885;product=starvation-sensing protein RspA;protein_id=WP_001644449.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 9193 10212 . + . ID=gene-CCO56_RS18890;Name=CCO56_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18890;old_locus_tag=CCO56_18880 NZ_NPMB01000010.1 Protein Homology CDS 9193 10212 . + 0 ID=cds-WP_000836487.1;Parent=gene-CCO56_RS18890;Dbxref=GenBank:WP_000836487.1;Name=WP_000836487.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=CCO56_RS18890;product=Zn-dependent oxidoreductase;protein_id=WP_000836487.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 10266 11645 . + . ID=gene-CCO56_RS18895;Name=CCO56_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18895;old_locus_tag=CCO56_18885 NZ_NPMB01000010.1 Protein Homology CDS 10266 11645 . + 0 ID=cds-WP_000192119.1;Parent=gene-CCO56_RS18895;Dbxref=GenBank:WP_000192119.1;Name=WP_000192119.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=CCO56_RS18895;product=MFS transporter;protein_id=WP_000192119.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 11789 13255 . + . ID=gene-CCO56_RS18905;Name=CCO56_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18905;old_locus_tag=CCO56_18895 NZ_NPMB01000010.1 Protein Homology CDS 11789 13255 . + 0 ID=cds-WP_023214823.1;Parent=gene-CCO56_RS18905;Dbxref=GenBank:WP_023214823.1;Name=WP_023214823.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=CCO56_RS18905;product=mannitol dehydrogenase family protein;protein_id=WP_023214823.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 13322 13525 . - . ID=gene-CCO56_RS18910;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=CCO56_RS18910;old_locus_tag=CCO56_18900 NZ_NPMB01000010.1 Protein Homology CDS 13322 13525 . - 0 ID=cds-WP_000989267.1;Parent=gene-CCO56_RS18910;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=CCO56_RS18910;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 13707 14393 . - . ID=gene-CCO56_RS18915;Name=CCO56_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18915;old_locus_tag=CCO56_18905 NZ_NPMB01000010.1 Protein Homology CDS 13707 14393 . - 0 ID=cds-WP_000215562.1;Parent=gene-CCO56_RS18915;Dbxref=GenBank:WP_000215562.1;Name=WP_000215562.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=CCO56_RS18915;product=GntR family transcriptional regulator;protein_id=WP_000215562.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 14523 15269 . - . ID=gene-CCO56_RS18920;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=CCO56_RS18920;old_locus_tag=CCO56_18910 NZ_NPMB01000010.1 Protein Homology CDS 14523 15269 . - 0 ID=cds-WP_000636564.1;Parent=gene-CCO56_RS18920;Dbxref=GenBank:WP_000636564.1;Name=WP_000636564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=CCO56_RS18920;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 15408 17450 . + . ID=gene-CCO56_RS18925;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=CCO56_RS18925;old_locus_tag=CCO56_18915 NZ_NPMB01000010.1 Protein Homology CDS 15408 17450 . + 0 ID=cds-WP_080177301.1;Parent=gene-CCO56_RS18925;Dbxref=GenBank:WP_080177301.1;Name=WP_080177301.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=CCO56_RS18925;product=peptidyl-dipeptidase Dcp;protein_id=WP_080177301.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 17795 17977 . + . ID=gene-CCO56_RS18935;Name=CCO56_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18935;old_locus_tag=CCO56_18925 NZ_NPMB01000010.1 Protein Homology CDS 17795 17977 . + 0 ID=cds-WP_000807642.1;Parent=gene-CCO56_RS18935;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=CCO56_RS18935;product=general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 18097 18624 . - . ID=gene-CCO56_RS18940;Name=CCO56_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18940;old_locus_tag=CCO56_18930 NZ_NPMB01000010.1 Protein Homology CDS 18097 18624 . - 0 ID=cds-WP_001235362.1;Parent=gene-CCO56_RS18940;Dbxref=GenBank:WP_001235362.1;Name=WP_001235362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=CCO56_RS18940;product=2-oxo-tetronate isomerase;protein_id=WP_001235362.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 19051 19443 . + . ID=gene-CCO56_RS18945;Name=CCO56_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18945;old_locus_tag=CCO56_18935 NZ_NPMB01000010.1 Protein Homology CDS 19051 19443 . + 0 ID=cds-WP_000775494.1;Parent=gene-CCO56_RS18945;Dbxref=GenBank:WP_000775494.1;Name=WP_000775494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=CCO56_RS18945;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000775494.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 19791 19886 . - . ID=gene-CCO56_RS18950;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=CCO56_RS18950;old_locus_tag=CCO56_18940 NZ_NPMB01000010.1 Protein Homology CDS 19791 19886 . - 0 ID=cds-WP_000901531.1;Parent=gene-CCO56_RS18950;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=CCO56_RS18950;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 20134 21321 . - . ID=gene-CCO56_RS18955;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=CCO56_RS18955;old_locus_tag=CCO56_18945 NZ_NPMB01000010.1 Protein Homology CDS 20134 21321 . - 0 ID=cds-WP_001068050.1;Parent=gene-CCO56_RS18955;Dbxref=GenBank:WP_001068050.1;Name=WP_001068050.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=CCO56_RS18955;product=efflux MFS transporter YdeE;protein_id=WP_001068050.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 21549 22451 . + . ID=gene-CCO56_RS18960;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=CCO56_RS18960;old_locus_tag=CCO56_18950 NZ_NPMB01000010.1 Protein Homology CDS 21549 22451 . + 0 ID=cds-WP_094882066.1;Parent=gene-CCO56_RS18960;Dbxref=GenBank:WP_094882066.1;Name=WP_094882066.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=CCO56_RS18960;product=O-acetylserine/cysteine exporter;protein_id=WP_094882066.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 22570 22785 . - . ID=gene-CCO56_RS18965;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=CCO56_RS18965;old_locus_tag=CCO56_18955 NZ_NPMB01000010.1 Protein Homology CDS 22570 22785 . - 0 ID=cds-WP_080177302.1;Parent=gene-CCO56_RS18965;Dbxref=GenBank:WP_080177302.1;Name=WP_080177302.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=CCO56_RS18965;product=multiple antibiotic resistance protein MarB;protein_id=WP_080177302.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 22814 23197 . - . ID=gene-CCO56_RS18970;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=CCO56_RS18970;old_locus_tag=CCO56_18960 NZ_NPMB01000010.1 Protein Homology CDS 22814 23197 . - 0 ID=cds-WP_000091194.1;Parent=gene-CCO56_RS18970;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=CCO56_RS18970;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 23217 23651 . - . ID=gene-CCO56_RS18975;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=CCO56_RS18975;old_locus_tag=CCO56_18965 NZ_NPMB01000010.1 Protein Homology CDS 23217 23651 . - 0 ID=cds-WP_000843434.1;Parent=gene-CCO56_RS18975;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=CCO56_RS18975;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 23910 24575 . + . ID=gene-CCO56_RS18980;Name=CCO56_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18980;old_locus_tag=CCO56_18970 NZ_NPMB01000010.1 Protein Homology CDS 23910 24575 . + 0 ID=cds-WP_000968968.1;Parent=gene-CCO56_RS18980;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=CCO56_RS18980;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 24622 25812 . - . ID=gene-CCO56_RS18985;Name=CCO56_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18985;old_locus_tag=CCO56_18975 NZ_NPMB01000010.1 Protein Homology CDS 24622 25812 . - 0 ID=cds-WP_000154613.1;Parent=gene-CCO56_RS18985;Dbxref=GenBank:WP_000154613.1;Name=WP_000154613.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=CCO56_RS18985;product=sugar transporter;protein_id=WP_000154613.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 25928 26800 . - . ID=gene-CCO56_RS18990;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=CCO56_RS18990;old_locus_tag=CCO56_18980 NZ_NPMB01000010.1 Protein Homology CDS 25928 26800 . - 0 ID=cds-WP_000366535.1;Parent=gene-CCO56_RS18990;Dbxref=GenBank:WP_000366535.1;Name=WP_000366535.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=CCO56_RS18990;product=putrescine utilization regulator PtrR;protein_id=WP_000366535.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 26903 28291 . + . ID=gene-CCO56_RS18995;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=CCO56_RS18995;old_locus_tag=CCO56_18985 NZ_NPMB01000010.1 Protein Homology CDS 26903 28291 . + 0 ID=cds-WP_069722101.1;Parent=gene-CCO56_RS18995;Dbxref=GenBank:WP_069722101.1;Name=WP_069722101.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=CCO56_RS18995;product=succinate-semialdehyde dehydrogenase;protein_id=WP_069722101.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 28364 29290 . + . ID=gene-CCO56_RS19000;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=CCO56_RS19000;old_locus_tag=CCO56_18990 NZ_NPMB01000010.1 Protein Homology CDS 28364 29290 . + 0 ID=cds-WP_080177303.1;Parent=gene-CCO56_RS19000;Dbxref=GenBank:WP_080177303.1;Name=WP_080177303.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=CCO56_RS19000;product=glutaminase B;protein_id=WP_080177303.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 29290 29649 . + . ID=gene-CCO56_RS19005;Name=CCO56_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19005;old_locus_tag=CCO56_18995 NZ_NPMB01000010.1 Protein Homology CDS 29290 29649 . + 0 ID=cds-WP_000992449.1;Parent=gene-CCO56_RS19005;Dbxref=GenBank:WP_000992449.1;Name=WP_000992449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=CCO56_RS19005;product=DUF4186 domain-containing protein;protein_id=WP_000992449.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 29905 30819 . + . ID=gene-CCO56_RS19010;Name=CCO56_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19010;old_locus_tag=CCO56_19000 NZ_NPMB01000010.1 Protein Homology CDS 29905 30819 . + 0 ID=cds-WP_024134262.1;Parent=gene-CCO56_RS19010;Dbxref=GenBank:WP_024134262.1;Name=WP_024134262.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=CCO56_RS19010;product=bestrophin family protein;protein_id=WP_024134262.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 30875 31417 . - . ID=gene-CCO56_RS19015;Name=CCO56_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19015;old_locus_tag=CCO56_19005 NZ_NPMB01000010.1 Protein Homology CDS 30875 31417 . - 0 ID=cds-WP_000513128.1;Parent=gene-CCO56_RS19015;Dbxref=GenBank:WP_000513128.1;Name=WP_000513128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=CCO56_RS19015;product=YybH family protein;protein_id=WP_000513128.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 32134 33252 . + . ID=gene-CCO56_RS19020;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO56_RS19020;old_locus_tag=CCO56_19010 NZ_NPMB01000010.1 Protein Homology CDS 32134 33252 . + 0 ID=cds-WP_080177304.1;Parent=gene-CCO56_RS19020;Dbxref=GenBank:WP_080177304.1;Name=WP_080177304.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=CCO56_RS19020;product=porin OmpC;protein_id=WP_080177304.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 33382 33723 . - . ID=gene-CCO56_RS19025;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO56_RS19025;old_locus_tag=CCO56_19015 NZ_NPMB01000010.1 Protein Homology CDS 33382 33723 . - 0 ID=cds-WP_000544772.1;Parent=gene-CCO56_RS19025;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=CCO56_RS19025;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 33736 34623 . - . ID=gene-CCO56_RS19030;Name=CCO56_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19030;old_locus_tag=CCO56_19020 NZ_NPMB01000010.1 Protein Homology CDS 33736 34623 . - 0 ID=cds-WP_080177305.1;Parent=gene-CCO56_RS19030;Dbxref=GenBank:WP_080177305.1;Name=WP_080177305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=CCO56_RS19030;product=ATP/GTP-binding protein;protein_id=WP_080177305.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 34611 35672 . - . ID=gene-CCO56_RS19035;Name=CCO56_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19035;old_locus_tag=CCO56_19025 NZ_NPMB01000010.1 Protein Homology CDS 34611 35672 . - 0 ID=cds-WP_080177306.1;Parent=gene-CCO56_RS19035;Dbxref=GenBank:WP_080177306.1;Name=WP_080177306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=CCO56_RS19035;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_080177306.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 35690 36100 . - . ID=gene-CCO56_RS19040;Name=CCO56_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19040;old_locus_tag=CCO56_19030 NZ_NPMB01000010.1 Protein Homology CDS 35690 36100 . - 0 ID=cds-WP_080177307.1;Parent=gene-CCO56_RS19040;Dbxref=GenBank:WP_080177307.1;Name=WP_080177307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=CCO56_RS19040;product=hydrogenase;protein_id=WP_080177307.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 36097 36396 . - . ID=gene-CCO56_RS19045;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO56_RS19045;old_locus_tag=CCO56_19035 NZ_NPMB01000010.1 Protein Homology CDS 36097 36396 . - 0 ID=cds-WP_000334912.1;Parent=gene-CCO56_RS19045;Dbxref=GenBank:WP_000334912.1;Name=WP_000334912.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=CCO56_RS19045;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334912.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 36396 37004 . - . ID=gene-CCO56_RS19050;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=CCO56_RS19050;old_locus_tag=CCO56_19040 NZ_NPMB01000010.1 Protein Homology CDS 36396 37004 . - 0 ID=cds-WP_000852666.1;Parent=gene-CCO56_RS19050;Dbxref=GenBank:WP_000852666.1;Name=WP_000852666.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=CCO56_RS19050;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852666.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 37010 37753 . - . ID=gene-CCO56_RS19055;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=CCO56_RS19055;old_locus_tag=CCO56_19045 NZ_NPMB01000010.1 Protein Homology CDS 37010 37753 . - 0 ID=cds-WP_000924455.1;Parent=gene-CCO56_RS19055;Dbxref=GenBank:WP_000924455.1;Name=WP_000924455.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=CCO56_RS19055;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924455.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 37704 39506 . - . ID=gene-CCO56_RS19060;Name=CCO56_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19060;old_locus_tag=CCO56_19050 NZ_NPMB01000010.1 Protein Homology CDS 37704 39506 . - 0 ID=cds-WP_000331201.1;Parent=gene-CCO56_RS19060;Dbxref=GenBank:WP_000331201.1;Name=WP_000331201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=CCO56_RS19060;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331201.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 39509 40612 . - . ID=gene-CCO56_RS19065;Name=CCO56_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19065;old_locus_tag=CCO56_19055 NZ_NPMB01000010.1 Protein Homology CDS 39509 40612 . - 0 ID=cds-WP_001194448.1;Parent=gene-CCO56_RS19065;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=CCO56_RS19065;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 41040 42131 . + . ID=gene-CCO56_RS19070;Name=CCO56_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19070;old_locus_tag=CCO56_19060 NZ_NPMB01000010.1 Protein Homology CDS 41040 42131 . + 0 ID=cds-WP_080177264.1;Parent=gene-CCO56_RS19070;Dbxref=GenBank:WP_080177264.1;Name=WP_080177264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=CCO56_RS19070;product=choloylglycine hydrolase family protein;protein_id=WP_080177264.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 42177 42968 . + . ID=gene-CCO56_RS19075;Name=CCO56_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19075;old_locus_tag=CCO56_19065 NZ_NPMB01000010.1 Protein Homology CDS 42177 42968 . + 0 ID=cds-WP_000388417.1;Parent=gene-CCO56_RS19075;Dbxref=GenBank:WP_000388417.1;Name=WP_000388417.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=CCO56_RS19075;product=FadR/GntR family transcriptional regulator;protein_id=WP_000388417.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 43027 44052 . - . ID=gene-CCO56_RS19080;Name=CCO56_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19080;old_locus_tag=CCO56_19070 NZ_NPMB01000010.1 Protein Homology CDS 43027 44052 . - 0 ID=cds-WP_000864935.1;Parent=gene-CCO56_RS19080;Dbxref=GenBank:WP_000864935.1;Name=WP_000864935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=CCO56_RS19080;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864935.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 44027 45313 . - . ID=gene-CCO56_RS19085;Name=CCO56_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19085;old_locus_tag=CCO56_19075 NZ_NPMB01000010.1 Protein Homology CDS 44027 45313 . - 0 ID=cds-WP_000824236.1;Parent=gene-CCO56_RS19085;Dbxref=GenBank:WP_000824236.1;Name=WP_000824236.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=CCO56_RS19085;product=MFS transporter;protein_id=WP_000824236.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 45489 47045 . - . ID=gene-CCO56_RS19090;Name=CCO56_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19090;old_locus_tag=CCO56_19080 NZ_NPMB01000010.1 Protein Homology CDS 45489 47045 . - 0 ID=cds-WP_000476906.1;Parent=gene-CCO56_RS19090;Dbxref=GenBank:WP_000476906.1;Name=WP_000476906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=CCO56_RS19090;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_000476906.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 47115 48356 . - . ID=gene-CCO56_RS19095;Name=CCO56_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19095;old_locus_tag=CCO56_19085 NZ_NPMB01000010.1 Protein Homology CDS 47115 48356 . - 0 ID=cds-WP_001095723.1;Parent=gene-CCO56_RS19095;Dbxref=GenBank:WP_001095723.1;Name=WP_001095723.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=CCO56_RS19095;product=MFS transporter;protein_id=WP_001095723.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 48346 49854 . - . ID=gene-CCO56_RS19100;Name=CCO56_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19100;old_locus_tag=CCO56_19090 NZ_NPMB01000010.1 Protein Homology CDS 48346 49854 . - 0 ID=cds-WP_000199421.1;Parent=gene-CCO56_RS19100;Dbxref=GenBank:WP_000199421.1;Name=WP_000199421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=CCO56_RS19100;product=FAD-dependent oxidoreductase;protein_id=WP_000199421.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 49899 50387 . + . ID=gene-CCO56_RS19105;Name=CCO56_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19105;old_locus_tag=CCO56_19095 NZ_NPMB01000010.1 Protein Homology CDS 49899 50387 . + 0 ID=cds-WP_001293633.1;Parent=gene-CCO56_RS19105;Dbxref=GenBank:WP_001293633.1;Name=WP_001293633.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=CCO56_RS19105;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293633.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 50580 51659 . + . ID=gene-CCO56_RS19110;Name=CCO56_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19110;old_locus_tag=CCO56_19100 NZ_NPMB01000010.1 Protein Homology CDS 50580 51659 . + 0 ID=cds-WP_080177265.1;Parent=gene-CCO56_RS19110;Dbxref=GenBank:WP_080177265.1;Name=WP_080177265.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=CCO56_RS19110;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_080177265.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 51711 52100 . - . ID=gene-CCO56_RS19115;Name=CCO56_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19115;old_locus_tag=CCO56_19105 NZ_NPMB01000010.1 Protein Homology CDS 51711 52100 . - 0 ID=cds-WP_023213484.1;Parent=gene-CCO56_RS19115;Dbxref=GenBank:WP_023213484.1;Name=WP_023213484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=CCO56_RS19115;product=RidA family protein;protein_id=WP_023213484.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 52272 52556 . - . ID=gene-CCO56_RS19120;Name=CCO56_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19120;old_locus_tag=CCO56_19110 NZ_NPMB01000010.1 Protein Homology CDS 52272 52556 . - 0 ID=cds-WP_000221344.1;Parent=gene-CCO56_RS19120;Dbxref=GenBank:WP_000221344.1;Name=WP_000221344.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=CCO56_RS19120;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221344.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 52546 52794 . - . ID=gene-CCO56_RS19125;Name=CCO56_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19125;old_locus_tag=CCO56_19115 NZ_NPMB01000010.1 Protein Homology CDS 52546 52794 . - 0 ID=cds-WP_000885424.1;Parent=gene-CCO56_RS19125;Dbxref=GenBank:WP_000885424.1;Name=WP_000885424.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=CCO56_RS19125;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11 NZ_NPMB01000010.1 RefSeq pseudogene 52995 53087 . + . ID=gene-CCO56_RS24195;Name=CCO56_RS24195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24195;partial=true;pseudo=true;start_range=.,52995 NZ_NPMB01000010.1 Protein Homology CDS 52995 53087 . + 0 ID=cds-CCO56_RS24195;Parent=gene-CCO56_RS24195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_090138499.1;locus_tag=CCO56_RS24195;partial=true;product=STM2901 family protein;pseudo=true;start_range=.,52995;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 53081 53413 . + . ID=gene-CCO56_RS19130;Name=CCO56_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19130;old_locus_tag=CCO56_19120 NZ_NPMB01000010.1 Protein Homology CDS 53081 53413 . + 0 ID=cds-WP_000253078.1;Parent=gene-CCO56_RS19130;Dbxref=GenBank:WP_000253078.1;Name=WP_000253078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=CCO56_RS19130;product=DUF1493 family protein;protein_id=WP_000253078.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 53688 53843 . - . ID=gene-CCO56_RS19145;Name=CCO56_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19145;old_locus_tag=CCO56_19135 NZ_NPMB01000010.1 Protein Homology CDS 53688 53843 . - 0 ID=cds-WP_000415760.1;Parent=gene-CCO56_RS19145;Dbxref=GenBank:WP_000415760.1;Name=WP_000415760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000415762.1;locus_tag=CCO56_RS19145;product=DUF29 family protein;protein_id=WP_000415760.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 54255 55163 . + . ID=gene-CCO56_RS19150;Name=CCO56_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19150;old_locus_tag=CCO56_19140 NZ_NPMB01000010.1 Protein Homology CDS 54255 55163 . + 0 ID=cds-WP_063916654.1;Parent=gene-CCO56_RS19150;Dbxref=GenBank:WP_063916654.1;Name=WP_063916654.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=CCO56_RS19150;product=LysR family transcriptional regulator;protein_id=WP_063916654.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 55337 56317 . + . ID=gene-CCO56_RS19155;Name=CCO56_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19155;old_locus_tag=CCO56_19145 NZ_NPMB01000010.1 Protein Homology CDS 55337 56317 . + 0 ID=cds-WP_000876808.1;Parent=gene-CCO56_RS19155;Dbxref=GenBank:WP_000876808.1;Name=WP_000876808.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441349.1;locus_tag=CCO56_RS19155;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_000876808.1;transl_table=11 NZ_NPMB01000010.1 RefSeq pseudogene 56565 56692 . - . ID=gene-CCO56_RS23875;Name=CCO56_RS23875;end_range=56692,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23875;partial=true;pseudo=true;start_range=.,56565 NZ_NPMB01000010.1 Protein Homology CDS 56565 56692 . - 0 ID=cds-CCO56_RS23875;Parent=gene-CCO56_RS23875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=56692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=CCO56_RS23875;partial=true;product=hypothetical protein;pseudo=true;start_range=.,56565;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 56782 57789 . + . ID=gene-CCO56_RS19160;Name=CCO56_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19160;old_locus_tag=CCO56_19150 NZ_NPMB01000010.1 Protein Homology CDS 56782 57789 . + 0 ID=cds-WP_000201083.1;Parent=gene-CCO56_RS19160;Dbxref=GenBank:WP_000201083.1;Name=WP_000201083.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=CCO56_RS19160;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000201083.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 57933 59384 . + . ID=gene-CCO56_RS19165;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CCO56_RS19165;old_locus_tag=CCO56_19155 NZ_NPMB01000010.1 Protein Homology CDS 57933 59384 . + 0 ID=cds-WP_001276630.1;Parent=gene-CCO56_RS19165;Dbxref=GenBank:WP_001276630.1;Name=WP_001276630.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=CCO56_RS19165;product=Na+/H+ antiporter NhaC;protein_id=WP_001276630.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 59397 60599 . + . ID=gene-CCO56_RS19170;Name=CCO56_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19170;old_locus_tag=CCO56_19160 NZ_NPMB01000010.1 Protein Homology CDS 59397 60599 . + 0 ID=cds-WP_000347156.1;Parent=gene-CCO56_RS19170;Dbxref=GenBank:WP_000347156.1;Name=WP_000347156.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=CCO56_RS19170;product=MalY/PatB family protein;protein_id=WP_000347156.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 60713 62788 . - . ID=gene-CCO56_RS19175;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO56_RS19175;old_locus_tag=CCO56_19165 NZ_NPMB01000010.1 Protein Homology CDS 60713 62788 . - 0 ID=cds-WP_000210589.1;Parent=gene-CCO56_RS19175;Dbxref=GenBank:WP_000210589.1;Name=WP_000210589.1;Ontology_term=GO:0005980,GO:0004133,GO:0004553;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=CCO56_RS19175;product=glycogen debranching protein GlgX;protein_id=WP_000210589.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 62845 65373 . - . ID=gene-CCO56_RS19180;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=CCO56_RS19180;old_locus_tag=CCO56_19170 NZ_NPMB01000010.1 Protein Homology CDS 62845 65373 . - 0 ID=cds-WP_023262556.1;Parent=gene-CCO56_RS19180;Dbxref=GenBank:WP_023262556.1;Name=WP_023262556.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=CCO56_RS19180;product=malto-oligosyltrehalose synthase;protein_id=WP_023262556.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 65370 67154 . - . ID=gene-CCO56_RS19185;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=CCO56_RS19185;old_locus_tag=CCO56_19175 NZ_NPMB01000010.1 Protein Homology CDS 65370 67154 . - 0 ID=cds-WP_038393852.1;Parent=gene-CCO56_RS19185;Dbxref=GenBank:WP_038393852.1;Name=WP_038393852.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=CCO56_RS19185;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_038393852.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 67283 68068 . - . ID=gene-CCO56_RS19190;Name=CCO56_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19190;old_locus_tag=CCO56_19180 NZ_NPMB01000010.1 Protein Homology CDS 67283 68068 . - 0 ID=cds-WP_001644401.1;Parent=gene-CCO56_RS19190;Dbxref=GenBank:WP_001644401.1;Name=WP_001644401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=CCO56_RS19190;product=OBAP family protein;protein_id=WP_001644401.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 68211 68540 . - . ID=gene-CCO56_RS19195;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=CCO56_RS19195;old_locus_tag=CCO56_19185 NZ_NPMB01000010.1 Protein Homology CDS 68211 68540 . - 0 ID=cds-WP_001032161.1;Parent=gene-CCO56_RS19195;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=CCO56_RS19195;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_NPMB01000010.1 RefSeq pseudogene 68775 69007 . - . ID=gene-CCO56_RS24015;Name=CCO56_RS24015;end_range=69007,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24015;old_locus_tag=CCO56_19190;partial=true;pseudo=true NZ_NPMB01000010.1 Protein Homology CDS 68775 69007 . - 0 ID=cds-CCO56_RS24015;Parent=gene-CCO56_RS24015;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=69007,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008484340.1;locus_tag=CCO56_RS24015;partial=true;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 69308 69943 . + . ID=gene-CCO56_RS19205;Name=CCO56_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19205;old_locus_tag=CCO56_19195 NZ_NPMB01000010.1 Protein Homology CDS 69308 69943 . + 0 ID=cds-WP_000778345.1;Parent=gene-CCO56_RS19205;Dbxref=GenBank:WP_000778345.1;Name=WP_000778345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778346.1;locus_tag=CCO56_RS19205;product=hypothetical protein;protein_id=WP_000778345.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 70078 70989 . + . ID=gene-CCO56_RS19210;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=CCO56_RS19210;old_locus_tag=CCO56_19200 NZ_NPMB01000010.1 Protein Homology CDS 70078 70989 . + 0 ID=cds-WP_001545517.1;Parent=gene-CCO56_RS19210;Dbxref=GenBank:WP_001545517.1;Name=WP_001545517.1;gbkey=CDS;gene=hlyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=CCO56_RS19210;product=hemolysin HlyE;protein_id=WP_001545517.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 71110 71541 . - . ID=gene-CCO56_RS19215;Name=CCO56_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19215;old_locus_tag=CCO56_19205 NZ_NPMB01000010.1 Protein Homology CDS 71110 71541 . - 0 ID=cds-WP_000152297.1;Parent=gene-CCO56_RS19215;Dbxref=GenBank:WP_000152297.1;Name=WP_000152297.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=CCO56_RS19215;product=OsmC family protein;protein_id=WP_000152297.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 72053 72268 . + . ID=gene-CCO56_RS19220;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=CCO56_RS19220;old_locus_tag=CCO56_19210 NZ_NPMB01000010.1 Protein Homology CDS 72053 72268 . + 0 ID=cds-WP_000495700.1;Parent=gene-CCO56_RS19220;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=CCO56_RS19220;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 72363 72506 . + . ID=gene-CCO56_RS19225;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=CCO56_RS19225;old_locus_tag=CCO56_19215 NZ_NPMB01000010.1 Protein Homology CDS 72363 72506 . + 0 ID=cds-WP_000841559.1;Parent=gene-CCO56_RS19225;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=CCO56_RS19225;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 72683 74380 . + . ID=gene-CCO56_RS19230;Name=CCO56_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19230;old_locus_tag=CCO56_19220 NZ_NPMB01000010.1 Protein Homology CDS 72683 74380 . + 0 ID=cds-WP_000450511.1;Parent=gene-CCO56_RS19230;Dbxref=GenBank:WP_000450511.1;Name=WP_000450511.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=CCO56_RS19230;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 74661 75671 . + . ID=gene-CCO56_RS19235;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=CCO56_RS19235;old_locus_tag=CCO56_19225 NZ_NPMB01000010.1 Protein Homology CDS 74661 75671 . + 0 ID=cds-WP_000642446.1;Parent=gene-CCO56_RS19235;Dbxref=GenBank:WP_000642446.1;Name=WP_000642446.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=CCO56_RS19235;product=alcohol dehydrogenase AdhP;protein_id=WP_000642446.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 75770 76426 . - . ID=gene-CCO56_RS19240;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=CCO56_RS19240;old_locus_tag=CCO56_19230 NZ_NPMB01000010.1 Protein Homology CDS 75770 76426 . - 0 ID=cds-WP_000045657.1;Parent=gene-CCO56_RS19240;Dbxref=GenBank:WP_000045657.1;Name=WP_000045657.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=CCO56_RS19240;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045657.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 76419 77303 . - . ID=gene-CCO56_RS19245;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO56_RS19245;old_locus_tag=CCO56_19235 NZ_NPMB01000010.1 Protein Homology CDS 76419 77303 . - 0 ID=cds-WP_000061599.1;Parent=gene-CCO56_RS19245;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=CCO56_RS19245;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 77317 80364 . - . ID=gene-CCO56_RS19250;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO56_RS19250;old_locus_tag=CCO56_19240 NZ_NPMB01000010.1 Protein Homology CDS 77317 80364 . - 0 ID=cds-WP_001574320.1;Parent=gene-CCO56_RS19250;Dbxref=GenBank:WP_001574320.1;Name=WP_001574320.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=CCO56_RS19250;product=formate dehydrogenase-N subunit alpha;protein_id=WP_001574320.1;transl_except=(pos:complement(79777..79779)%2Caa:Sec);transl_table=11 NZ_NPMB01000010.1 RefSeq gene 80642 81523 . + . ID=gene-CCO56_RS19255;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=CCO56_RS19255;old_locus_tag=CCO56_19245 NZ_NPMB01000010.1 Protein Homology CDS 80642 81523 . + 0 ID=cds-WP_000203801.1;Parent=gene-CCO56_RS19255;Dbxref=GenBank:WP_000203801.1;Name=WP_000203801.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=CCO56_RS19255;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000203801.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 82049 83137 . + . ID=gene-CCO56_RS19265;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=CCO56_RS19265;old_locus_tag=CCO56_19255 NZ_NPMB01000010.1 Protein Homology CDS 82049 83137 . + 0 ID=cds-WP_000769035.1;Parent=gene-CCO56_RS19265;Dbxref=GenBank:WP_000769035.1;Name=WP_000769035.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=CCO56_RS19265;product=porin OmpD;protein_id=WP_000769035.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 83281 83661 . + . ID=gene-CCO56_RS19270;Name=CCO56_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19270;old_locus_tag=CCO56_19260 NZ_NPMB01000010.1 Protein Homology CDS 83281 83661 . + 0 ID=cds-WP_077905442.1;Parent=gene-CCO56_RS19270;Dbxref=GenBank:WP_077905442.1;Name=WP_077905442.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=CCO56_RS19270;product=GFA family protein;protein_id=WP_077905442.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 83686 85173 . - . ID=gene-CCO56_RS19275;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=CCO56_RS19275;old_locus_tag=CCO56_19265 NZ_NPMB01000010.1 Protein Homology CDS 83686 85173 . - 0 ID=cds-WP_000489732.1;Parent=gene-CCO56_RS19275;Dbxref=GenBank:WP_000489732.1;Name=WP_000489732.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=CCO56_RS19275;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489732.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 85291 85869 . + . ID=gene-CCO56_RS19280;Name=CCO56_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19280;old_locus_tag=CCO56_19270 NZ_NPMB01000010.1 Protein Homology CDS 85291 85869 . + 0 ID=cds-WP_000121044.1;Parent=gene-CCO56_RS19280;Dbxref=GenBank:WP_000121044.1;Name=WP_000121044.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=CCO56_RS19280;product=TetR family transcriptional regulator;protein_id=WP_000121044.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 86083 87471 . + . ID=gene-CCO56_RS19285;Name=CCO56_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19285;old_locus_tag=CCO56_19275 NZ_NPMB01000010.1 Protein Homology CDS 86083 87471 . + 0 ID=cds-WP_000198255.1;Parent=gene-CCO56_RS19285;Dbxref=GenBank:WP_000198255.1;Name=WP_000198255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=CCO56_RS19285;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_000198255.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 87563 91303 . + . ID=gene-CCO56_RS19290;Name=CCO56_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19290;old_locus_tag=CCO56_19280 NZ_NPMB01000010.1 Protein Homology CDS 87563 91303 . + 0 ID=cds-WP_000040411.1;Parent=gene-CCO56_RS19290;Dbxref=GenBank:WP_000040411.1;Name=WP_000040411.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=CCO56_RS19290;product=nitrate reductase subunit alpha;protein_id=WP_000040411.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 91300 92844 . + . ID=gene-CCO56_RS19295;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO56_RS19295;old_locus_tag=CCO56_19285 NZ_NPMB01000010.1 Protein Homology CDS 91300 92844 . + 0 ID=cds-WP_000702592.1;Parent=gene-CCO56_RS19295;Dbxref=GenBank:WP_000702592.1;Name=WP_000702592.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=CCO56_RS19295;product=nitrate reductase subunit beta;protein_id=WP_000702592.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 92844 93539 . + . ID=gene-CCO56_RS19300;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=CCO56_RS19300;old_locus_tag=CCO56_19290 NZ_NPMB01000010.1 Protein Homology CDS 92844 93539 . + 0 ID=cds-WP_023230786.1;Parent=gene-CCO56_RS19300;Dbxref=GenBank:WP_023230786.1;Name=WP_023230786.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=CCO56_RS19300;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_023230786.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 93536 94216 . + . ID=gene-CCO56_RS19305;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO56_RS19305;old_locus_tag=CCO56_19295 NZ_NPMB01000010.1 Protein Homology CDS 93536 94216 . + 0 ID=cds-WP_000617106.1;Parent=gene-CCO56_RS19305;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=CCO56_RS19305;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 94322 95215 . + . ID=gene-CCO56_RS19310;Name=CCO56_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19310;old_locus_tag=CCO56_19300 NZ_NPMB01000010.1 Protein Homology CDS 94322 95215 . + 0 ID=cds-WP_000804297.1;Parent=gene-CCO56_RS19310;Dbxref=GenBank:WP_000804297.1;Name=WP_000804297.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=CCO56_RS19310;product=PhzF family isomerase;protein_id=WP_000804297.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 95251 96096 . - . ID=gene-CCO56_RS19315;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=CCO56_RS19315;old_locus_tag=CCO56_19305 NZ_NPMB01000010.1 Protein Homology CDS 95251 96096 . - 0 ID=cds-WP_000200329.1;Parent=gene-CCO56_RS19315;Dbxref=GenBank:WP_000200329.1;Name=WP_000200329.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=CCO56_RS19315;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000200329.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 96379 97011 . - . ID=gene-CCO56_RS19320;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=CCO56_RS19320;old_locus_tag=CCO56_19310 NZ_NPMB01000010.1 Protein Homology CDS 96379 97011 . - 0 ID=cds-WP_001147132.1;Parent=gene-CCO56_RS19320;Dbxref=GenBank:WP_001147132.1;Name=WP_001147132.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=CCO56_RS19320;product=type III secretion system effector SteA;protein_id=WP_001147132.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 97524 99017 . + . ID=gene-CCO56_RS19330;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=CCO56_RS19330;old_locus_tag=CCO56_19320 NZ_NPMB01000010.1 Protein Homology CDS 97524 99017 . + 0 ID=cds-WP_000857108.1;Parent=gene-CCO56_RS19330;Dbxref=GenBank:WP_000857108.1;Name=WP_000857108.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=CCO56_RS19330;product=L-asparagine permease;protein_id=WP_000857108.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 99094 99315 . - . ID=gene-CCO56_RS19335;Name=CCO56_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19335;old_locus_tag=CCO56_19325 NZ_NPMB01000010.1 Protein Homology CDS 99094 99315 . - 0 ID=cds-WP_000825228.1;Parent=gene-CCO56_RS19335;Dbxref=GenBank:WP_000825228.1;Name=WP_000825228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=CCO56_RS19335;product=YgdI/YgdR family lipoprotein;protein_id=WP_000825228.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 99460 100521 . - . ID=gene-CCO56_RS19340;Name=CCO56_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19340;old_locus_tag=CCO56_19330 NZ_NPMB01000010.1 Protein Homology CDS 99460 100521 . - 0 ID=cds-WP_000550639.1;Parent=gene-CCO56_RS19340;Dbxref=GenBank:WP_000550639.1;Name=WP_000550639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=CCO56_RS19340;product=YncE family protein;protein_id=WP_000550639.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 100785 102905 . + . ID=gene-CCO56_RS19345;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=CCO56_RS19345;old_locus_tag=CCO56_19335 NZ_NPMB01000010.1 Protein Homology CDS 100785 102905 . + 0 ID=cds-WP_000692031.1;Parent=gene-CCO56_RS19345;Dbxref=GenBank:WP_000692031.1;Name=WP_000692031.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=CCO56_RS19345;product=TonB-dependent receptor PqqU;protein_id=WP_000692031.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 102961 103626 . - . ID=gene-CCO56_RS19350;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=CCO56_RS19350;old_locus_tag=CCO56_19340 NZ_NPMB01000010.1 Protein Homology CDS 102961 103626 . - 0 ID=cds-WP_001119592.1;Parent=gene-CCO56_RS19350;Dbxref=GenBank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=CCO56_RS19350;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119592.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 103960 104997 . - . ID=gene-CCO56_RS19355;Name=CCO56_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19355;old_locus_tag=CCO56_19345 NZ_NPMB01000010.1 Protein Homology CDS 103960 104997 . - 0 ID=cds-WP_001517827.1;Parent=gene-CCO56_RS19355;Dbxref=GenBank:WP_001517827.1;Name=WP_001517827.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=CCO56_RS19355;product=NADP-dependent oxidoreductase;protein_id=WP_001517827.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 105208 105723 . + . ID=gene-CCO56_RS19360;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=CCO56_RS19360;old_locus_tag=CCO56_19350 NZ_NPMB01000010.1 Protein Homology CDS 105208 105723 . + 0 ID=cds-WP_000155373.1;Parent=gene-CCO56_RS19360;Dbxref=GenBank:WP_000155373.1;Name=WP_000155373.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=CCO56_RS19360;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155373.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 105723 106172 . + . ID=gene-CCO56_RS19365;Name=CCO56_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19365;old_locus_tag=CCO56_19355 NZ_NPMB01000010.1 Protein Homology CDS 105723 106172 . + 0 ID=cds-WP_001076565.1;Parent=gene-CCO56_RS19365;Dbxref=GenBank:WP_001076565.1;Name=WP_001076565.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=CCO56_RS19365;product=DMT family transporter;protein_id=WP_001076565.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 106177 106410 . - . ID=gene-CCO56_RS19370;Name=CCO56_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19370;old_locus_tag=CCO56_19360 NZ_NPMB01000010.1 Protein Homology CDS 106177 106410 . - 0 ID=cds-WP_000018720.1;Parent=gene-CCO56_RS19370;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=CCO56_RS19370;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 106634 107959 . + . ID=gene-CCO56_RS19375;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=CCO56_RS19375;old_locus_tag=CCO56_19365 NZ_NPMB01000010.1 Protein Homology CDS 106634 107959 . + 0 ID=cds-WP_001129947.1;Parent=gene-CCO56_RS19375;Dbxref=GenBank:WP_001129947.1;Name=WP_001129947.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=CCO56_RS19375;product=virulence-associated effector SrfA;protein_id=WP_001129947.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 107964 110945 . + . ID=gene-CCO56_RS19380;Name=CCO56_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19380;old_locus_tag=CCO56_19370 NZ_NPMB01000010.1 Protein Homology CDS 107964 110945 . + 0 ID=cds-WP_000960835.1;Parent=gene-CCO56_RS19380;Dbxref=GenBank:WP_000960835.1;Name=WP_000960835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=CCO56_RS19380;product=virulence factor SrfB;protein_id=WP_000960835.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 110942 113086 . + . ID=gene-CCO56_RS19385;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=CCO56_RS19385;old_locus_tag=CCO56_19375 NZ_NPMB01000010.1 Protein Homology CDS 110942 113086 . + 0 ID=cds-WP_000165622.1;Parent=gene-CCO56_RS19385;Dbxref=GenBank:WP_000165622.1;Name=WP_000165622.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=CCO56_RS19385;product=virulence-associated effector SrfC;protein_id=WP_000165622.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 113131 113304 . - . ID=gene-CCO56_RS19390;Name=CCO56_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19390;old_locus_tag=CCO56_19380 NZ_NPMB01000010.1 Protein Homology CDS 113131 113304 . - 0 ID=cds-WP_001522647.1;Parent=gene-CCO56_RS19390;Dbxref=GenBank:WP_001522647.1;Name=WP_001522647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=CCO56_RS19390;product=GhoT/OrtT family toxin;protein_id=WP_001522647.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 113503 113598 . + . ID=gene-CCO56_RS19395;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=CCO56_RS19395;old_locus_tag=CCO56_19385 NZ_NPMB01000010.1 Protein Homology CDS 113503 113598 . + 0 ID=cds-WP_001103198.1;Parent=gene-CCO56_RS19395;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=CCO56_RS19395;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 113703 115148 . - . ID=gene-CCO56_RS19400;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=CCO56_RS19400;old_locus_tag=CCO56_19390 NZ_NPMB01000010.1 Protein Homology CDS 113703 115148 . - 0 ID=cds-WP_000158095.1;Parent=gene-CCO56_RS19400;Dbxref=GenBank:WP_000158095.1;Name=WP_000158095.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=CCO56_RS19400;product=aminobutyraldehyde dehydrogenase;protein_id=WP_000158095.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 115263 116687 . - . ID=gene-CCO56_RS19405;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=CCO56_RS19405;old_locus_tag=CCO56_19395 NZ_NPMB01000010.1 Protein Homology CDS 115263 116687 . - 0 ID=cds-WP_000760687.1;Parent=gene-CCO56_RS19405;Dbxref=GenBank:WP_000760687.1;Name=WP_000760687.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=CCO56_RS19405;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760687.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 116823 117593 . - . ID=gene-CCO56_RS19410;Name=CCO56_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19410;old_locus_tag=CCO56_19400 NZ_NPMB01000010.1 Protein Homology CDS 116823 117593 . - 0 ID=cds-WP_000237721.1;Parent=gene-CCO56_RS19410;Dbxref=GenBank:WP_000237721.1;Name=WP_000237721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=CCO56_RS19410;product=M15 family metallopeptidase;protein_id=WP_000237721.1;transl_table=11 NZ_NPMB01000010.1 RefSeq pseudogene 117853 118084 . - . ID=gene-CCO56_RS19415;Name=CCO56_RS19415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS19415;old_locus_tag=CCO56_19405;pseudo=true NZ_NPMB01000010.1 Protein Homology CDS 117853 118084 . - 0 ID=cds-CCO56_RS19415;Parent=gene-CCO56_RS19415;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=CCO56_RS19415;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 118117 118515 . - . ID=gene-CCO56_RS19420;Name=CCO56_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19420;old_locus_tag=CCO56_19410 NZ_NPMB01000010.1 Protein Homology CDS 118117 118515 . - 0 ID=cds-WP_000747901.1;Parent=gene-CCO56_RS19420;Dbxref=GenBank:WP_000747901.1;Name=WP_000747901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=CCO56_RS19420;product=hypothetical protein;protein_id=WP_000747901.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 119031 119981 . + . ID=gene-CCO56_RS19425;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=CCO56_RS19425;old_locus_tag=CCO56_19415 NZ_NPMB01000010.1 Protein Homology CDS 119031 119981 . + 0 ID=cds-WP_080177309.1;Parent=gene-CCO56_RS19425;Dbxref=GenBank:WP_080177309.1;Name=WP_080177309.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=CCO56_RS19425;product=SPI-2 type III secretion system effector SifB;protein_id=WP_080177309.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 120254 120484 . + . ID=gene-CCO56_RS19430;Name=CCO56_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19430;old_locus_tag=CCO56_19420 NZ_NPMB01000010.1 Protein Homology CDS 120254 120484 . + 0 ID=cds-WP_000956438.1;Parent=gene-CCO56_RS19430;Dbxref=GenBank:WP_000956438.1;Name=WP_000956438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=CCO56_RS19430;product=DUF2554 family protein;protein_id=WP_000956438.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 120485 122449 . - . ID=gene-CCO56_RS19435;Name=CCO56_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19435;old_locus_tag=CCO56_19425 NZ_NPMB01000010.1 Protein Homology CDS 120485 122449 . - 0 ID=cds-WP_001249761.1;Parent=gene-CCO56_RS19435;Dbxref=GenBank:WP_001249761.1;Name=WP_001249761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=CCO56_RS19435;product=peptidase U32 family protein;protein_id=WP_001249761.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 122528 123064 . - . ID=gene-CCO56_RS19440;Name=CCO56_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19440;old_locus_tag=CCO56_19430 NZ_NPMB01000010.1 Protein Homology CDS 122528 123064 . - 0 ID=cds-WP_031569106.1;Parent=gene-CCO56_RS19440;Dbxref=GenBank:WP_031569106.1;Name=WP_031569106.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=CCO56_RS19440;product=helix-turn-helix domain-containing protein;protein_id=WP_031569106.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 123156 124334 . + . ID=gene-CCO56_RS19445;Name=CCO56_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19445;old_locus_tag=CCO56_19435 NZ_NPMB01000010.1 Protein Homology CDS 123156 124334 . + 0 ID=cds-WP_001238500.1;Parent=gene-CCO56_RS19445;Dbxref=GenBank:WP_001238500.1;Name=WP_001238500.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=CCO56_RS19445;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_001238500.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 124388 125056 . - . ID=gene-CCO56_RS19450;Name=CCO56_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19450;old_locus_tag=CCO56_19440 NZ_NPMB01000010.1 Protein Homology CDS 124388 125056 . - 0 ID=cds-WP_001259021.1;Parent=gene-CCO56_RS19450;Dbxref=GenBank:WP_001259021.1;Name=WP_001259021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=CCO56_RS19450;product=DUF3313 domain-containing protein;protein_id=WP_001259021.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 125212 125808 . - . ID=gene-CCO56_RS19455;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=CCO56_RS19455;old_locus_tag=CCO56_19445 NZ_NPMB01000010.1 Protein Homology CDS 125212 125808 . - 0 ID=cds-WP_000218275.1;Parent=gene-CCO56_RS19455;Dbxref=GenBank:WP_000218275.1;Name=WP_000218275.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=CCO56_RS19455;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218275.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 125795 126808 . - . ID=gene-CCO56_RS19460;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=CCO56_RS19460;old_locus_tag=CCO56_19450 NZ_NPMB01000010.1 Protein Homology CDS 125795 126808 . - 0 ID=cds-WP_001644365.1;Parent=gene-CCO56_RS19460;Dbxref=GenBank:WP_001644365.1;Name=WP_001644365.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=CCO56_RS19460;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001644365.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 126915 127895 . + . ID=gene-CCO56_RS19465;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=CCO56_RS19465;old_locus_tag=CCO56_19455 NZ_NPMB01000010.1 Protein Homology CDS 126915 127895 . + 0 ID=cds-WP_070794016.1;Parent=gene-CCO56_RS19465;Dbxref=GenBank:WP_070794016.1;Name=WP_070794016.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=CCO56_RS19465;product=YdcK family protein;protein_id=WP_070794016.1;transl_table=11 NZ_NPMB01000010.1 RefSeq pseudogene 127892 128431 . - . ID=gene-CCO56_RS19470;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=pseudogene;locus_tag=CCO56_RS19470;old_locus_tag=CCO56_19460;pseudo=true NZ_NPMB01000010.1 Protein Homology CDS 127892 128431 . - 0 ID=cds-CCO56_RS19470;Parent=gene-CCO56_RS19470;Note=internal stop;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=CCO56_RS19470;product=50S ribosomal protein L7/L12-serine acetyltransferase;pseudo=true;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 128648 129766 . + . ID=gene-CCO56_RS19475;Name=CCO56_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19475;old_locus_tag=CCO56_19465 NZ_NPMB01000010.1 Protein Homology CDS 128648 129766 . + 0 ID=cds-WP_000144623.1;Parent=gene-CCO56_RS19475;Dbxref=GenBank:WP_000144623.1;Name=WP_000144623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=CCO56_RS19475;product=M42 family metallopeptidase;protein_id=WP_000144623.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 129763 130044 . + . ID=gene-CCO56_RS19480;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=CCO56_RS19480;old_locus_tag=CCO56_19470 NZ_NPMB01000010.1 Protein Homology CDS 129763 130044 . + 0 ID=cds-WP_000976132.1;Parent=gene-CCO56_RS19480;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=CCO56_RS19480;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 130055 131368 . + . ID=gene-CCO56_RS19485;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=CCO56_RS19485;old_locus_tag=CCO56_19475 NZ_NPMB01000010.1 Protein Homology CDS 130055 131368 . + 0 ID=cds-WP_000460835.1;Parent=gene-CCO56_RS19485;Dbxref=GenBank:WP_000460835.1;Name=WP_000460835.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=CCO56_RS19485;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_000460835.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 131382 132188 . + . ID=gene-CCO56_RS19490;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=CCO56_RS19490;old_locus_tag=CCO56_19480 NZ_NPMB01000010.1 Protein Homology CDS 131382 132188 . + 0 ID=cds-WP_000118619.1;Parent=gene-CCO56_RS19490;Dbxref=GenBank:WP_000118619.1;Name=WP_000118619.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=CCO56_RS19490;product=BtpA family protein SgcQ;protein_id=WP_000118619.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 132320 132757 . + . ID=gene-CCO56_RS19495;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=CCO56_RS19495;old_locus_tag=CCO56_19485 NZ_NPMB01000010.1 Protein Homology CDS 132320 132757 . + 0 ID=cds-WP_000606454.1;Parent=gene-CCO56_RS19495;Dbxref=GenBank:WP_000606454.1;Name=WP_000606454.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=CCO56_RS19495;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606454.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 132769 133401 . + . ID=gene-CCO56_RS19500;Name=CCO56_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19500;old_locus_tag=CCO56_19490 NZ_NPMB01000010.1 Protein Homology CDS 132769 133401 . + 0 ID=cds-WP_000600602.1;Parent=gene-CCO56_RS19500;Dbxref=GenBank:WP_000600602.1;Name=WP_000600602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=CCO56_RS19500;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600602.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 133417 134208 . + . ID=gene-CCO56_RS19505;Name=CCO56_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19505;old_locus_tag=CCO56_19495 NZ_NPMB01000010.1 Protein Homology CDS 133417 134208 . + 0 ID=cds-WP_001562804.1;Parent=gene-CCO56_RS19505;Dbxref=GenBank:WP_001562804.1;Name=WP_001562804.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=CCO56_RS19505;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001562804.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 134208 134645 . + . ID=gene-CCO56_RS19510;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=CCO56_RS19510;old_locus_tag=CCO56_19500 NZ_NPMB01000010.1 Protein Homology CDS 134208 134645 . + 0 ID=cds-WP_000354845.1;Parent=gene-CCO56_RS19510;Dbxref=GenBank:WP_000354845.1;Name=WP_000354845.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=CCO56_RS19510;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_000354845.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 134692 135894 . - . ID=gene-CCO56_RS19515;Name=CCO56_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19515;old_locus_tag=CCO56_19505 NZ_NPMB01000010.1 Protein Homology CDS 134692 135894 . - 0 ID=cds-WP_001644361.1;Parent=gene-CCO56_RS19515;Dbxref=GenBank:WP_001644361.1;Name=WP_001644361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=CCO56_RS19515;product=lactate oxidase;protein_id=WP_001644361.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 135906 136481 . - . ID=gene-CCO56_RS19520;Name=CCO56_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19520;old_locus_tag=CCO56_19510 NZ_NPMB01000010.1 Protein Homology CDS 135906 136481 . - 0 ID=cds-WP_001024319.1;Parent=gene-CCO56_RS19520;Dbxref=GenBank:WP_001024319.1;Name=WP_001024319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=CCO56_RS19520;product=YceI family protein;protein_id=WP_001024319.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 136677 138332 . - . ID=gene-CCO56_RS19525;Name=CCO56_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19525;old_locus_tag=CCO56_19515 NZ_NPMB01000010.1 Protein Homology CDS 136677 138332 . - 0 ID=cds-WP_094882067.1;Parent=gene-CCO56_RS19525;Dbxref=GenBank:WP_094882067.1;Name=WP_094882067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=CCO56_RS19525;product=glucan biosynthesis protein D;protein_id=WP_094882067.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 138552 140060 . - . ID=gene-CCO56_RS19530;Name=CCO56_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19530;old_locus_tag=CCO56_19520 NZ_NPMB01000010.1 Protein Homology CDS 138552 140060 . - 0 ID=cds-WP_053258913.1;Parent=gene-CCO56_RS19530;Dbxref=GenBank:WP_053258913.1;Name=WP_053258913.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=CCO56_RS19530;product=carboxylesterase/lipase family protein;protein_id=WP_053258913.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 140109 141452 . - . ID=gene-CCO56_RS19535;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=CCO56_RS19535;old_locus_tag=CCO56_19525 NZ_NPMB01000010.1 Protein Homology CDS 140109 141452 . - 0 ID=cds-WP_000024089.1;Parent=gene-CCO56_RS19535;Dbxref=GenBank:WP_000024089.1;Name=WP_000024089.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=CCO56_RS19535;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000024089.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 141745 142668 . + . ID=gene-CCO56_RS19540;Name=CCO56_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19540;old_locus_tag=CCO56_19530 NZ_NPMB01000010.1 Protein Homology CDS 141745 142668 . + 0 ID=cds-WP_000414259.1;Parent=gene-CCO56_RS19540;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=CCO56_RS19540;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 142729 144354 . - . ID=gene-CCO56_RS19545;Name=CCO56_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19545;old_locus_tag=CCO56_19535 NZ_NPMB01000010.1 Protein Homology CDS 142729 144354 . - 0 ID=cds-WP_000528501.1;Parent=gene-CCO56_RS19545;Dbxref=GenBank:WP_000528501.1;Name=WP_000528501.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=CCO56_RS19545;product=methyl-accepting chemotaxis protein;protein_id=WP_000528501.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 144523 145641 . - . ID=gene-CCO56_RS19555;Name=CCO56_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19555;old_locus_tag=CCO56_19545 NZ_NPMB01000010.1 Protein Homology CDS 144523 145641 . - 0 ID=cds-WP_053258915.1;Parent=gene-CCO56_RS19555;Dbxref=GenBank:WP_053258915.1;Name=WP_053258915.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=CCO56_RS19555;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_053258915.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 145673 145948 . - . ID=gene-CCO56_RS19560;Name=CCO56_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19560;old_locus_tag=CCO56_19550 NZ_NPMB01000010.1 Protein Homology CDS 145673 145948 . - 0 ID=cds-WP_001120770.1;Parent=gene-CCO56_RS19560;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=CCO56_RS19560;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 146472 146873 . + . ID=gene-CCO56_RS19565;Name=CCO56_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19565;old_locus_tag=CCO56_19555 NZ_NPMB01000010.1 Protein Homology CDS 146472 146873 . + 0 ID=cds-WP_077905323.1;Parent=gene-CCO56_RS19565;Dbxref=GenBank:WP_077905323.1;Name=WP_077905323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=CCO56_RS19565;product=effector protein;protein_id=WP_077905323.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 147002 147718 . - . ID=gene-CCO56_RS19570;Name=CCO56_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19570;old_locus_tag=CCO56_19560 NZ_NPMB01000010.1 Protein Homology CDS 147002 147718 . - 0 ID=cds-WP_001527697.1;Parent=gene-CCO56_RS19570;Dbxref=GenBank:WP_001527697.1;Name=WP_001527697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=CCO56_RS19570;product=hypothetical protein;protein_id=WP_001527697.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 148144 149370 . + . ID=gene-CCO56_RS19575;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=CCO56_RS19575;old_locus_tag=CCO56_19565 NZ_NPMB01000010.1 Protein Homology CDS 148144 149370 . + 0 ID=cds-WP_001131418.1;Parent=gene-CCO56_RS19575;Dbxref=GenBank:WP_001131418.1;Name=WP_001131418.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=CCO56_RS19575;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_001131418.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 149491 149835 . - . ID=gene-CCO56_RS19580;Name=CCO56_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19580;old_locus_tag=CCO56_19570 NZ_NPMB01000010.1 Protein Homology CDS 149491 149835 . - 0 ID=cds-WP_000281190.1;Parent=gene-CCO56_RS19580;Dbxref=GenBank:WP_000281190.1;Name=WP_000281190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=CCO56_RS19580;product=DUF1294 domain-containing protein;protein_id=WP_000281190.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 150753 151514 . + . ID=gene-CCO56_RS19585;Name=CCO56_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19585;old_locus_tag=CCO56_19575 NZ_NPMB01000010.1 Protein Homology CDS 150753 151514 . + 0 ID=cds-WP_001527895.1;Parent=gene-CCO56_RS19585;Dbxref=GenBank:WP_001527895.1;Name=WP_001527895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=CCO56_RS19585;product=transporter substrate-binding domain-containing protein;protein_id=WP_001527895.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 151521 152168 . + . ID=gene-CCO56_RS19590;Name=CCO56_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19590;old_locus_tag=CCO56_19580 NZ_NPMB01000010.1 Protein Homology CDS 151521 152168 . + 0 ID=cds-WP_023213809.1;Parent=gene-CCO56_RS19590;Dbxref=GenBank:WP_023213809.1;Name=WP_023213809.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=CCO56_RS19590;product=amino acid ABC transporter permease;protein_id=WP_023213809.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 152193 152924 . + . ID=gene-CCO56_RS19595;Name=CCO56_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19595;old_locus_tag=CCO56_19585 NZ_NPMB01000010.1 Protein Homology CDS 152193 152924 . + 0 ID=cds-WP_001634043.1;Parent=gene-CCO56_RS19595;Dbxref=GenBank:WP_001634043.1;Name=WP_001634043.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=CCO56_RS19595;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001634043.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 152921 153601 . + . ID=gene-CCO56_RS19600;Name=CCO56_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19600;old_locus_tag=CCO56_19590 NZ_NPMB01000010.1 Protein Homology CDS 152921 153601 . + 0 ID=cds-WP_000560165.1;Parent=gene-CCO56_RS19600;Dbxref=GenBank:WP_000560165.1;Name=WP_000560165.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=CCO56_RS19600;product=amino acid ABC transporter permease;protein_id=WP_000560165.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 153738 155288 . + . ID=gene-CCO56_RS19605;Name=CCO56_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19605;old_locus_tag=CCO56_19595 NZ_NPMB01000010.1 Protein Homology CDS 153738 155288 . + 0 ID=cds-WP_001555933.1;Parent=gene-CCO56_RS19605;Dbxref=GenBank:WP_001555933.1;Name=WP_001555933.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=CCO56_RS19605;product=glycosyltransferase family 39 protein;protein_id=WP_001555933.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 155752 156414 . + . ID=gene-CCO56_RS19610;Name=CCO56_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19610;old_locus_tag=CCO56_19600 NZ_NPMB01000010.1 Protein Homology CDS 155752 156414 . + 0 ID=cds-WP_001611673.1;Parent=gene-CCO56_RS19610;Dbxref=GenBank:WP_001611673.1;Name=WP_001611673.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=CCO56_RS19610;product=class I SAM-dependent methyltransferase;protein_id=WP_001611673.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 156686 157216 . - . ID=gene-CCO56_RS19615;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=CCO56_RS19615;old_locus_tag=CCO56_19605 NZ_NPMB01000010.1 Protein Homology CDS 156686 157216 . - 0 ID=cds-WP_023136769.1;Parent=gene-CCO56_RS19615;Dbxref=GenBank:WP_023136769.1;Name=WP_023136769.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=CCO56_RS19615;product=cytochrome b561;protein_id=WP_023136769.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 157333 158133 . - . ID=gene-CCO56_RS19620;Name=CCO56_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19620;old_locus_tag=CCO56_19610 NZ_NPMB01000010.1 Protein Homology CDS 157333 158133 . - 0 ID=cds-WP_023136768.1;Parent=gene-CCO56_RS19620;Dbxref=GenBank:WP_023136768.1;Name=WP_023136768.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=CCO56_RS19620;product=YdcF family protein;protein_id=WP_023136768.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 158197 162099 . - . ID=gene-CCO56_RS19625;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=CCO56_RS19625;old_locus_tag=CCO56_19615 NZ_NPMB01000010.1 Protein Homology CDS 158197 162099 . - 0 ID=cds-WP_001550139.1;Parent=gene-CCO56_RS19625;Dbxref=GenBank:WP_001550139.1;Name=WP_001550139.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=CCO56_RS19625;product=ATP-dependent RNA helicase HrpA;protein_id=WP_001550139.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 162300 162905 . + . ID=gene-CCO56_RS19630;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=CCO56_RS19630;old_locus_tag=CCO56_19620 NZ_NPMB01000010.1 Protein Homology CDS 162300 162905 . + 0 ID=cds-WP_000048931.1;Parent=gene-CCO56_RS19630;Dbxref=GenBank:WP_000048931.1;Name=WP_000048931.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=CCO56_RS19630;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048931.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 162902 163351 . - . ID=gene-CCO56_RS19635;Name=CCO56_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19635;old_locus_tag=CCO56_19625 NZ_NPMB01000010.1 Protein Homology CDS 162902 163351 . - 0 ID=cds-WP_001518898.1;Parent=gene-CCO56_RS19635;Dbxref=GenBank:WP_001518898.1;Name=WP_001518898.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=CCO56_RS19635;product=GFA family protein;protein_id=WP_001518898.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 163495 163818 . - . ID=gene-CCO56_RS19640;Name=CCO56_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19640;old_locus_tag=CCO56_19630 NZ_NPMB01000010.1 Protein Homology CDS 163495 163818 . - 0 ID=cds-WP_000760414.1;Parent=gene-CCO56_RS19640;Dbxref=GenBank:WP_000760414.1;Name=WP_000760414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=CCO56_RS19640;product=YdbL family protein;protein_id=WP_000760414.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 163826 164017 . - . ID=gene-CCO56_RS19645;Name=CCO56_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19645;old_locus_tag=CCO56_19635 NZ_NPMB01000010.1 Protein Homology CDS 163826 164017 . - 0 ID=cds-WP_000784063.1;Parent=gene-CCO56_RS19645;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=CCO56_RS19645;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 164017 166653 . - . ID=gene-CCO56_RS19650;Name=CCO56_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19650;old_locus_tag=CCO56_19640 NZ_NPMB01000010.1 Protein Homology CDS 164017 166653 . - 0 ID=cds-WP_000677022.1;Parent=gene-CCO56_RS19650;Dbxref=GenBank:WP_000677022.1;Name=WP_000677022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=CCO56_RS19650;product=YdbH family protein;protein_id=WP_000677022.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 166920 167909 . + . ID=gene-CCO56_RS19655;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=CCO56_RS19655;old_locus_tag=CCO56_19645 NZ_NPMB01000010.1 Protein Homology CDS 166920 167909 . + 0 ID=cds-WP_000762206.1;Parent=gene-CCO56_RS19655;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=CCO56_RS19655;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 168020 168430 . + . ID=gene-CCO56_RS19660;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=CCO56_RS19660;old_locus_tag=CCO56_19650 NZ_NPMB01000010.1 Protein Homology CDS 168020 168430 . + 0 ID=cds-WP_000725238.1;Parent=gene-CCO56_RS19660;Dbxref=GenBank:WP_000725238.1;Name=WP_000725238.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=CCO56_RS19660;product=heat shock protein HslJ;protein_id=WP_000725238.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 168474 168740 . - . ID=gene-CCO56_RS19665;Name=CCO56_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19665;old_locus_tag=CCO56_19655 NZ_NPMB01000010.1 Protein Homology CDS 168474 168740 . - 0 ID=cds-WP_001200680.1;Parent=gene-CCO56_RS19665;Dbxref=GenBank:WP_001200680.1;Name=WP_001200680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=CCO56_RS19665;product=putative hemolysin;protein_id=WP_001200680.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 168644 168955 . + . ID=gene-CCO56_RS19670;Name=CCO56_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19670;old_locus_tag=CCO56_19660 NZ_NPMB01000010.1 Protein Homology CDS 168644 168955 . + 0 ID=cds-WP_077948957.1;Parent=gene-CCO56_RS19670;Dbxref=GenBank:WP_077948957.1;Name=WP_077948957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=CCO56_RS19670;product=reverse transcriptase;protein_id=WP_077948957.1;transl_table=11 NZ_NPMB01000010.1 RefSeq gene 169016 172540 . + . ID=gene-CCO56_RS19675;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=CCO56_RS19675;old_locus_tag=CCO56_19665 NZ_NPMB01000010.1 Protein Homology CDS 169016 172540 . + 0 ID=cds-WP_061377763.1;Parent=gene-CCO56_RS19675;Dbxref=GenBank:WP_061377763.1;Name=WP_061377763.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=CCO56_RS19675;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_061377763.1;transl_table=11 ##sequence-region NZ_NPMB01000011.1 1 159014 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000011.1 RefSeq region 1 159014 . + . ID=NZ_NPMB01000011.1:1..159014;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000011.1 RefSeq gene 301 2565 . + . ID=gene-CCO56_RS19680;Name=CCO56_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19680;old_locus_tag=CCO56_19670 NZ_NPMB01000011.1 Protein Homology CDS 301 2565 . + 0 ID=cds-WP_080177341.1;Parent=gene-CCO56_RS19680;Dbxref=GenBank:WP_080177341.1;Name=WP_080177341.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=CCO56_RS19680;product=ComEC family protein;protein_id=WP_080177341.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 2602 4350 . + . ID=gene-CCO56_RS19685;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=CCO56_RS19685;old_locus_tag=CCO56_19675 NZ_NPMB01000011.1 Protein Homology CDS 2602 4350 . + 0 ID=cds-WP_000551246.1;Parent=gene-CCO56_RS19685;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=CCO56_RS19685;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 4347 5324 . + . ID=gene-CCO56_RS19690;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CCO56_RS19690;old_locus_tag=CCO56_19680 NZ_NPMB01000011.1 Protein Homology CDS 4347 5324 . + 0 ID=cds-WP_000561679.1;Parent=gene-CCO56_RS19690;Dbxref=GenBank:WP_000561679.1;Name=WP_000561679.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=CCO56_RS19690;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000561679.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 5368 6600 . + . ID=gene-CCO56_RS19695;Name=CCO56_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19695;old_locus_tag=CCO56_19685 NZ_NPMB01000011.1 Protein Homology CDS 5368 6600 . + 0 ID=cds-WP_080177342.1;Parent=gene-CCO56_RS19695;Dbxref=GenBank:WP_080177342.1;Name=WP_080177342.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=CCO56_RS19695;product=winged helix-turn-helix domain-containing protein;protein_id=WP_080177342.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 6652 6834 . + . ID=gene-CCO56_RS19700;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=CCO56_RS19700;old_locus_tag=CCO56_19690 NZ_NPMB01000011.1 Protein Homology CDS 6652 6834 . + 0 ID=cds-WP_000350056.1;Parent=gene-CCO56_RS19700;Dbxref=GenBank:WP_000350056.1;Name=WP_000350056.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=CCO56_RS19700;product=protein YcaR;protein_id=WP_000350056.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 6831 7577 . + . ID=gene-CCO56_RS19705;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CCO56_RS19705;old_locus_tag=CCO56_19695 NZ_NPMB01000011.1 Protein Homology CDS 6831 7577 . + 0 ID=cds-WP_000011576.1;Parent=gene-CCO56_RS19705;Dbxref=GenBank:WP_000011576.1;Name=WP_000011576.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=CCO56_RS19705;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011576.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 7788 8681 . + . ID=gene-CCO56_RS19710;Name=CCO56_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19710;old_locus_tag=CCO56_19700 NZ_NPMB01000011.1 Protein Homology CDS 7788 8681 . + 0 ID=cds-WP_000436893.1;Parent=gene-CCO56_RS19710;Dbxref=GenBank:WP_000436893.1;Name=WP_000436893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=CCO56_RS19710;product=YcbJ family phosphotransferase;protein_id=WP_000436893.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 8661 9437 . - . ID=gene-CCO56_RS19715;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=CCO56_RS19715;old_locus_tag=CCO56_19705 NZ_NPMB01000011.1 Protein Homology CDS 8661 9437 . - 0 ID=cds-WP_000899567.1;Parent=gene-CCO56_RS19715;Dbxref=GenBank:WP_000899567.1;Name=WP_000899567.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=CCO56_RS19715;product=envelope biogenesis factor ElyC;protein_id=WP_000899567.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 9573 10376 . + . ID=gene-CCO56_RS19725;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=CCO56_RS19725;old_locus_tag=CCO56_19715 NZ_NPMB01000011.1 Protein Homology CDS 9573 10376 . + 0 ID=cds-WP_001154025.1;Parent=gene-CCO56_RS19725;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=CCO56_RS19725;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 10369 11691 . + . ID=gene-CCO56_RS19730;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=CCO56_RS19730;old_locus_tag=CCO56_19720 NZ_NPMB01000011.1 Protein Homology CDS 10369 11691 . + 0 ID=cds-WP_001288828.1;Parent=gene-CCO56_RS19730;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=CCO56_RS19730;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 11672 12376 . + . ID=gene-CCO56_RS19735;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=CCO56_RS19735;old_locus_tag=CCO56_19725 NZ_NPMB01000011.1 Protein Homology CDS 11672 12376 . + 0 ID=cds-WP_000060025.1;Parent=gene-CCO56_RS19735;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=CCO56_RS19735;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 12376 16842 . + . ID=gene-CCO56_RS19740;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=CCO56_RS19740;old_locus_tag=CCO56_19730 NZ_NPMB01000011.1 Protein Homology CDS 12376 16842 . + 0 ID=cds-WP_000572737.1;Parent=gene-CCO56_RS19740;Dbxref=GenBank:WP_000572737.1;Name=WP_000572737.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=CCO56_RS19740;product=chromosome partition protein MukB;protein_id=WP_000572737.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 17187 19034 . + . ID=gene-CCO56_RS19745;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=CCO56_RS19745;old_locus_tag=CCO56_19735 NZ_NPMB01000011.1 Protein Homology CDS 17187 19034 . + 0 ID=cds-WP_080177343.1;Parent=gene-CCO56_RS19745;Dbxref=GenBank:WP_080177343.1;Name=WP_080177343.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=CCO56_RS19745;product=L%2CD-transpeptidase;protein_id=WP_080177343.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 19294 19842 . + . ID=gene-CCO56_RS19755;Name=CCO56_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19755;old_locus_tag=CCO56_19745 NZ_NPMB01000011.1 Protein Homology CDS 19294 19842 . + 0 ID=cds-WP_000357052.1;Parent=gene-CCO56_RS19755;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=CCO56_RS19755;product=YcbK family protein;protein_id=WP_000357052.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 19870 20517 . + . ID=gene-CCO56_RS19760;Name=CCO56_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19760;old_locus_tag=CCO56_19750 NZ_NPMB01000011.1 Protein Homology CDS 19870 20517 . + 0 ID=cds-WP_001109471.1;Parent=gene-CCO56_RS19760;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=CCO56_RS19760;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 20579 21769 . - . ID=gene-CCO56_RS19765;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=CCO56_RS19765;old_locus_tag=CCO56_19755 NZ_NPMB01000011.1 Protein Homology CDS 20579 21769 . - 0 ID=cds-WP_000462653.1;Parent=gene-CCO56_RS19765;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=CCO56_RS19765;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 21954 23051 . - . ID=gene-CCO56_RS19770;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=CCO56_RS19770;old_locus_tag=CCO56_19760 NZ_NPMB01000011.1 Protein Homology CDS 21954 23051 . - 0 ID=cds-WP_001539614.1;Parent=gene-CCO56_RS19770;Dbxref=GenBank:WP_001539614.1;Name=WP_001539614.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=CCO56_RS19770;product=porin OmpF;protein_id=WP_001539614.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 23659 25059 . - . ID=gene-CCO56_RS19775;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CCO56_RS19775;old_locus_tag=CCO56_19765 NZ_NPMB01000011.1 Protein Homology CDS 23659 25059 . - 0 ID=cds-WP_000117870.1;Parent=gene-CCO56_RS19775;Dbxref=GenBank:WP_000117870.1;Name=WP_000117870.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=CCO56_RS19775;product=asparagine--tRNA ligase;protein_id=WP_000117870.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 25228 26430 . - . ID=gene-CCO56_RS19780;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CCO56_RS19780;old_locus_tag=CCO56_19770 NZ_NPMB01000011.1 Protein Homology CDS 25228 26430 . - 0 ID=cds-WP_080177344.1;Parent=gene-CCO56_RS19780;Dbxref=GenBank:WP_080177344.1;Name=WP_080177344.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=CCO56_RS19780;product=nicotinate phosphoribosyltransferase;protein_id=WP_080177344.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 26625 27917 . - . ID=gene-CCO56_RS19785;Name=int;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=CCO56_RS19785;old_locus_tag=CCO56_19775 NZ_NPMB01000011.1 Protein Homology CDS 26625 27917 . - 0 ID=cds-WP_001262307.1;Parent=gene-CCO56_RS19785;Dbxref=GenBank:WP_001262307.1;Name=WP_001262307.1;gbkey=CDS;gene=int;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459980.1;locus_tag=CCO56_RS19785;product=FimB-specific integrase Int;protein_id=WP_001262307.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 27962 28210 . - . ID=gene-CCO56_RS19790;Name=xis;gbkey=Gene;gene=xis;gene_biotype=protein_coding;locus_tag=CCO56_RS19790;old_locus_tag=CCO56_19780 NZ_NPMB01000011.1 Protein Homology CDS 27962 28210 . - 0 ID=cds-WP_000065276.1;Parent=gene-CCO56_RS19790;Dbxref=GenBank:WP_000065276.1;Name=WP_000065276.1;gbkey=CDS;gene=xis;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459981.1;locus_tag=CCO56_RS19790;product=excisionase Xis;protein_id=WP_000065276.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 28251 28490 . - . ID=gene-CCO56_RS19795;Name=CCO56_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19795;old_locus_tag=CCO56_19785 NZ_NPMB01000011.1 Protein Homology CDS 28251 28490 . - 0 ID=cds-WP_001237031.1;Parent=gene-CCO56_RS19795;Dbxref=GenBank:WP_001237031.1;Name=WP_001237031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459982.1;locus_tag=CCO56_RS19795;product=DUF4060 family protein;protein_id=WP_001237031.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 28533 29690 . - . ID=gene-CCO56_RS19800;Name=CCO56_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19800;old_locus_tag=CCO56_19790 NZ_NPMB01000011.1 Protein Homology CDS 28533 29690 . - 0 ID=cds-WP_001539618.1;Parent=gene-CCO56_RS19800;Dbxref=GenBank:WP_001539618.1;Name=WP_001539618.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459983.3;locus_tag=CCO56_RS19800;product=RecT family recombinase;protein_id=WP_001539618.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 29653 32853 . - . ID=gene-CCO56_RS19805;Name=CCO56_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19805;old_locus_tag=CCO56_19795 NZ_NPMB01000011.1 Protein Homology CDS 29653 32853 . - 0 ID=cds-WP_094882068.1;Parent=gene-CCO56_RS19805;Dbxref=GenBank:WP_094882068.1;Name=WP_094882068.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017119.1;locus_tag=CCO56_RS19805;product=RecE family exodeoxyribonuclease;protein_id=WP_094882068.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 32980 33330 . - . ID=gene-CCO56_RS19810;Name=CCO56_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19810;old_locus_tag=CCO56_19800 NZ_NPMB01000011.1 Protein Homology CDS 32980 33330 . - 0 ID=cds-WP_077946072.1;Parent=gene-CCO56_RS19810;Dbxref=GenBank:WP_077946072.1;Name=WP_077946072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461566.1;locus_tag=CCO56_RS19810;product=DNA breaking-rejoining protein;protein_id=WP_077946072.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 33352 33510 . - . ID=gene-CCO56_RS19815;Name=CCO56_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19815;old_locus_tag=CCO56_19805 NZ_NPMB01000011.1 Protein Homology CDS 33352 33510 . - 0 ID=cds-WP_000917563.1;Parent=gene-CCO56_RS19815;Dbxref=GenBank:WP_000917563.1;Name=WP_000917563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461565.1;locus_tag=CCO56_RS19815;product=YdaE family protein;protein_id=WP_000917563.1;transl_table=11 NZ_NPMB01000011.1 RefSeq pseudogene 33503 33658 . - . ID=gene-CCO56_RS23880;Name=CCO56_RS23880;end_range=33658,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23880;partial=true;pseudo=true NZ_NPMB01000011.1 Protein Homology CDS 33503 33658 . - 0 ID=cds-CCO56_RS23880;Parent=gene-CCO56_RS23880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=33658,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461564.1;locus_tag=CCO56_RS23880;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 33909 34115 . + . ID=gene-CCO56_RS19820;Name=CCO56_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19820;old_locus_tag=CCO56_19810 NZ_NPMB01000011.1 Protein Homology CDS 33909 34115 . + 0 ID=cds-WP_000373339.1;Parent=gene-CCO56_RS19820;Dbxref=GenBank:WP_000373339.1;Name=WP_000373339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750115.1;locus_tag=CCO56_RS19820;product=hypothetical protein;protein_id=WP_000373339.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 34155 34961 . - . ID=gene-CCO56_RS19825;Name=CCO56_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19825;old_locus_tag=CCO56_19815 NZ_NPMB01000011.1 Protein Homology CDS 34155 34961 . - 0 ID=cds-WP_000846936.1;Parent=gene-CCO56_RS19825;Dbxref=GenBank:WP_000846936.1;Name=WP_000846936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846934.1;locus_tag=CCO56_RS19825;product=DUF3037 domain-containing protein;protein_id=WP_000846936.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 34958 35806 . - . ID=gene-CCO56_RS19830;Name=CCO56_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19830;old_locus_tag=CCO56_19820 NZ_NPMB01000011.1 Protein Homology CDS 34958 35806 . - 0 ID=cds-WP_000097141.1;Parent=gene-CCO56_RS19830;Dbxref=GenBank:WP_000097141.1;Name=WP_000097141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097141.1;locus_tag=CCO56_RS19830;product=hypothetical protein;protein_id=WP_000097141.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 35978 36445 . - . ID=gene-CCO56_RS19835;Name=CCO56_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19835;old_locus_tag=CCO56_19825 NZ_NPMB01000011.1 Protein Homology CDS 35978 36445 . - 0 ID=cds-WP_080177153.1;Parent=gene-CCO56_RS19835;Dbxref=GenBank:WP_080177153.1;Name=WP_080177153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539622.1;locus_tag=CCO56_RS19835;product=helix-turn-helix domain-containing protein;protein_id=WP_080177153.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 36459 36686 . + . ID=gene-CCO56_RS19840;Name=CCO56_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19840;old_locus_tag=CCO56_19830 NZ_NPMB01000011.1 Protein Homology CDS 36459 36686 . + 0 ID=cds-WP_000145711.1;Parent=gene-CCO56_RS19840;Dbxref=GenBank:WP_000145711.1;Name=WP_000145711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145711.1;locus_tag=CCO56_RS19840;product=transcriptional regulator;protein_id=WP_000145711.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 36652 37026 . + . ID=gene-CCO56_RS19845;Name=CCO56_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19845;old_locus_tag=CCO56_19835 NZ_NPMB01000011.1 Protein Homology CDS 36652 37026 . + 0 ID=cds-WP_015702794.1;Parent=gene-CCO56_RS19845;Dbxref=GenBank:WP_015702794.1;Name=WP_015702794.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459988.1;locus_tag=CCO56_RS19845;product=CII family transcriptional regulator;protein_id=WP_015702794.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 37564 38361 . + . ID=gene-CCO56_RS19850;Name=CCO56_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19850;old_locus_tag=CCO56_19840 NZ_NPMB01000011.1 Protein Homology CDS 37564 38361 . + 0 ID=cds-WP_024132164.1;Parent=gene-CCO56_RS19850;Dbxref=GenBank:WP_024132164.1;Name=WP_024132164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915366.1;locus_tag=CCO56_RS19850;product=YdaU family protein;protein_id=WP_024132164.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 38364 39113 . + . ID=gene-CCO56_RS19855;Name=CCO56_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19855;old_locus_tag=CCO56_19845 NZ_NPMB01000011.1 Protein Homology CDS 38364 39113 . + 0 ID=cds-WP_000800012.1;Parent=gene-CCO56_RS19855;Dbxref=GenBank:WP_000800012.1;Name=WP_000800012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459990.1;locus_tag=CCO56_RS19855;product=ATP-binding protein;protein_id=WP_000800012.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 39124 39471 . + . ID=gene-CCO56_RS19860;Name=CCO56_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19860;old_locus_tag=CCO56_19850 NZ_NPMB01000011.1 Protein Homology CDS 39124 39471 . + 0 ID=cds-WP_000113624.1;Parent=gene-CCO56_RS19860;Dbxref=GenBank:WP_000113624.1;Name=WP_000113624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459991.1;locus_tag=CCO56_RS19860;product=DUF977 family protein;protein_id=WP_000113624.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 39468 39779 . + . ID=gene-CCO56_RS19865;Name=CCO56_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19865;old_locus_tag=CCO56_19855 NZ_NPMB01000011.1 Protein Homology CDS 39468 39779 . + 0 ID=cds-WP_000065108.1;Parent=gene-CCO56_RS19865;Dbxref=GenBank:WP_000065108.1;Name=WP_000065108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459992.1;locus_tag=CCO56_RS19865;product=ead/Ea22-like family protein;protein_id=WP_000065108.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 39857 40147 . + . ID=gene-CCO56_RS19870;Name=CCO56_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19870;old_locus_tag=CCO56_19860 NZ_NPMB01000011.1 Protein Homology CDS 39857 40147 . + 0 ID=cds-WP_080177155.1;Parent=gene-CCO56_RS19870;Dbxref=GenBank:WP_080177155.1;Name=WP_080177155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459993.1;locus_tag=CCO56_RS19870;product=hypothetical protein;protein_id=WP_080177155.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 40439 40672 . + . ID=gene-CCO56_RS19875;Name=CCO56_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19875;old_locus_tag=CCO56_19865 NZ_NPMB01000011.1 Protein Homology CDS 40439 40672 . + 0 ID=cds-WP_001217665.1;Parent=gene-CCO56_RS19875;Dbxref=GenBank:WP_001217665.1;Name=WP_001217665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459994.1;locus_tag=CCO56_RS19875;product=DinI family protein;protein_id=WP_001217665.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 40789 41037 . + . ID=gene-CCO56_RS19880;Name=CCO56_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19880;old_locus_tag=CCO56_19870 NZ_NPMB01000011.1 Protein Homology CDS 40789 41037 . + 0 ID=cds-WP_014343878.1;Parent=gene-CCO56_RS19880;Dbxref=GenBank:WP_014343878.1;Name=WP_014343878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015702798.1;locus_tag=CCO56_RS19880;product=hypothetical protein;protein_id=WP_014343878.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 41072 41674 . + . ID=gene-CCO56_RS19885;Name=CCO56_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19885;old_locus_tag=CCO56_19875 NZ_NPMB01000011.1 Protein Homology CDS 41072 41674 . + 0 ID=cds-WP_000929790.1;Parent=gene-CCO56_RS19885;Dbxref=GenBank:WP_000929790.1;Name=WP_000929790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459995.1;locus_tag=CCO56_RS19885;product=DUF1367 family protein;protein_id=WP_000929790.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 41674 41880 . + . ID=gene-CCO56_RS23885;Name=CCO56_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23885;old_locus_tag=CCO56_19880 NZ_NPMB01000011.1 Protein Homology CDS 41674 41880 . + 0 ID=cds-WP_001241016.1;Parent=gene-CCO56_RS23885;Dbxref=GenBank:WP_001241016.1;Name=WP_001241016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528771.1;locus_tag=CCO56_RS23885;product=hypothetical protein;protein_id=WP_001241016.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 41883 42494 . + . ID=gene-CCO56_RS19895;Name=CCO56_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19895;old_locus_tag=CCO56_19885 NZ_NPMB01000011.1 Protein Homology CDS 41883 42494 . + 0 ID=cds-WP_001096547.1;Parent=gene-CCO56_RS19895;Dbxref=GenBank:WP_001096547.1;Name=WP_001096547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459996.1;locus_tag=CCO56_RS19895;product=recombination protein NinG;protein_id=WP_001096547.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 42491 42631 . + . ID=gene-CCO56_RS19900;Name=CCO56_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19900;old_locus_tag=CCO56_19890 NZ_NPMB01000011.1 Protein Homology CDS 42491 42631 . + 0 ID=cds-WP_000801757.1;Parent=gene-CCO56_RS19900;Dbxref=GenBank:WP_000801757.1;Name=WP_000801757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461553.1;locus_tag=CCO56_RS19900;product=YlcG family protein;protein_id=WP_000801757.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 42628 43317 . + . ID=gene-CCO56_RS19905;Name=CCO56_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19905;old_locus_tag=CCO56_19895 NZ_NPMB01000011.1 Protein Homology CDS 42628 43317 . + 0 ID=cds-WP_079986391.1;Parent=gene-CCO56_RS19905;Dbxref=GenBank:WP_079986391.1;Name=WP_079986391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097218.1;locus_tag=CCO56_RS19905;product=bacteriophage antitermination protein Q;protein_id=WP_079986391.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 43642 43718 . + . ID=gene-CCO56_RS19910;Name=CCO56_RS19910;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS19910;old_locus_tag=CCO56_19900 NZ_NPMB01000011.1 tRNAscan-SE tRNA 43642 43718 . + . ID=rna-CCO56_RS19910;Parent=gene-CCO56_RS19910;anticodon=(pos:43676..43678);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS19910;product=tRNA-Arg NZ_NPMB01000011.1 tRNAscan-SE exon 43642 43718 . + . ID=exon-CCO56_RS19910-1;Parent=rna-CCO56_RS19910;anticodon=(pos:43676..43678);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS19910;product=tRNA-Arg NZ_NPMB01000011.1 RefSeq gene 43807 43995 . + . ID=gene-CCO56_RS19915;Name=CCO56_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19915;old_locus_tag=CCO56_19905 NZ_NPMB01000011.1 Protein Homology CDS 43807 43995 . + 0 ID=cds-WP_000657897.1;Parent=gene-CCO56_RS19915;Dbxref=GenBank:WP_000657897.1;Name=WP_000657897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000657897.1;locus_tag=CCO56_RS19915;product=hypothetical protein;protein_id=WP_000657897.1;transl_table=11 NZ_NPMB01000011.1 RefSeq pseudogene 44082 44156 . + . ID=gene-CCO56_RS24200;Name=CCO56_RS24200;end_range=44156,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24200;partial=true;pseudo=true NZ_NPMB01000011.1 Protein Homology CDS 44082 44156 . + 0 ID=cds-CCO56_RS24200;Parent=gene-CCO56_RS24200;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=44156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283169.1;locus_tag=CCO56_RS24200;partial=true;product=phage holin family protein;pseudo=true;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 44210 44896 . - . ID=gene-CCO56_RS19920;Name=CCO56_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19920;old_locus_tag=CCO56_19910 NZ_NPMB01000011.1 Protein Homology CDS 44210 44896 . - 0 ID=cds-WP_079986392.1;Parent=gene-CCO56_RS19920;Dbxref=GenBank:WP_079986392.1;Name=WP_079986392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461550.1;locus_tag=CCO56_RS19920;product=PipA/GogA/GtgA family type III secretion system effector;protein_id=WP_079986392.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 45348 47801 . + . ID=gene-CCO56_RS19925;Name=CCO56_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19925;old_locus_tag=CCO56_19915 NZ_NPMB01000011.1 Protein Homology CDS 45348 47801 . + 0 ID=cds-WP_094882069.1;Parent=gene-CCO56_RS19925;Dbxref=GenBank:WP_094882069.1;Name=WP_094882069.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=CCO56_RS19925;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_094882069.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 47978 49089 . + . ID=gene-CCO56_RS19930;Name=CCO56_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19930;old_locus_tag=CCO56_19920 NZ_NPMB01000011.1 Protein Homology CDS 47978 48239 . + 0 ID=cds-WP_094882070.1;Parent=gene-CCO56_RS19930;Dbxref=GenBank:WP_094882070.1;Name=WP_094882070.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=CCO56_RS19930;product=IS3 family transposase;protein_id=WP_094882070.1;transl_table=11 NZ_NPMB01000011.1 Protein Homology CDS 48239 49089 . + 2 ID=cds-WP_094882070.1;Parent=gene-CCO56_RS19930;Dbxref=GenBank:WP_094882070.1;Name=WP_094882070.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=CCO56_RS19930;product=IS3 family transposase;protein_id=WP_094882070.1;transl_table=11 NZ_NPMB01000011.1 RefSeq pseudogene 49132 49236 . + . ID=gene-CCO56_RS19935;Name=CCO56_RS19935;end_range=49236,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS19935;old_locus_tag=CCO56_19925;partial=true;pseudo=true NZ_NPMB01000011.1 Protein Homology CDS 49132 49236 . + 0 ID=cds-CCO56_RS19935;Parent=gene-CCO56_RS19935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=49236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=CCO56_RS19935;partial=true;product=HNH endonuclease;pseudo=true;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 49591 49761 . + . ID=gene-CCO56_RS19940;Name=CCO56_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19940;old_locus_tag=CCO56_19930 NZ_NPMB01000011.1 GeneMarkS-2+ CDS 49591 49761 . + 0 ID=cds-WP_226311907.1;Parent=gene-CCO56_RS19940;Dbxref=GenBank:WP_226311907.1;Name=WP_226311907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS19940;product=hypothetical protein;protein_id=WP_226311907.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 50264 50569 . + . ID=gene-CCO56_RS19945;Name=CCO56_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19945;old_locus_tag=CCO56_19935 NZ_NPMB01000011.1 Protein Homology CDS 50264 50569 . + 0 ID=cds-WP_223353418.1;Parent=gene-CCO56_RS19945;Dbxref=GenBank:WP_223353418.1;Name=WP_223353418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000177623.1;locus_tag=CCO56_RS19945;product=HP1 family phage holin;protein_id=WP_223353418.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 50547 51035 . + . ID=gene-CCO56_RS19950;Name=CCO56_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19950;old_locus_tag=CCO56_19940 NZ_NPMB01000011.1 Protein Homology CDS 50547 51035 . + 0 ID=cds-WP_079986349.1;Parent=gene-CCO56_RS19950;Dbxref=GenBank:WP_079986349.1;Name=WP_079986349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208103.1;locus_tag=CCO56_RS19950;product=lysozyme;protein_id=WP_079986349.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 51032 51499 . + . ID=gene-CCO56_RS19955;Name=CCO56_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19955;old_locus_tag=CCO56_19945 NZ_NPMB01000011.1 Protein Homology CDS 51032 51499 . + 0 ID=cds-WP_079986348.1;Parent=gene-CCO56_RS19955;Dbxref=GenBank:WP_079986348.1;Name=WP_079986348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835730.1;locus_tag=CCO56_RS19955;product=lysis protein;protein_id=WP_079986348.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 51828 52331 . + . ID=gene-CCO56_RS19960;Name=CCO56_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19960;old_locus_tag=CCO56_19950 NZ_NPMB01000011.1 Protein Homology CDS 51828 52331 . + 0 ID=cds-WP_001252721.1;Parent=gene-CCO56_RS19960;Dbxref=GenBank:WP_001252721.1;Name=WP_001252721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252716.1;locus_tag=CCO56_RS19960;product=hypothetical protein;protein_id=WP_001252721.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 52588 52989 . - . ID=gene-CCO56_RS19965;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=CCO56_RS19965;old_locus_tag=CCO56_19955 NZ_NPMB01000011.1 Protein Homology CDS 52588 52989 . - 0 ID=cds-WP_000669693.1;Parent=gene-CCO56_RS19965;Dbxref=GenBank:WP_000669693.1;Name=WP_000669693.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461546.1;locus_tag=CCO56_RS19965;product=g-type lysoyme inhibitor PliG;protein_id=WP_000669693.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 53275 53820 . + . ID=gene-CCO56_RS19970;Name=CCO56_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19970;old_locus_tag=CCO56_19960 NZ_NPMB01000011.1 Protein Homology CDS 53275 53820 . + 0 ID=cds-WP_001102153.1;Parent=gene-CCO56_RS19970;Dbxref=GenBank:WP_001102153.1;Name=WP_001102153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461545.2;locus_tag=CCO56_RS19970;product=terminase small subunit;protein_id=WP_001102153.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 53792 55723 . + . ID=gene-CCO56_RS19975;Name=CCO56_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19975;old_locus_tag=CCO56_19965 NZ_NPMB01000011.1 Protein Homology CDS 53792 55723 . + 0 ID=cds-WP_080177157.1;Parent=gene-CCO56_RS19975;Dbxref=GenBank:WP_080177157.1;Name=WP_080177157.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461544.1;locus_tag=CCO56_RS19975;product=phage terminase large subunit family protein;protein_id=WP_080177157.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 55707 55910 . + . ID=gene-CCO56_RS19980;Name=CCO56_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19980;old_locus_tag=CCO56_19970 NZ_NPMB01000011.1 Protein Homology CDS 55707 55910 . + 0 ID=cds-WP_079915362.1;Parent=gene-CCO56_RS19980;Dbxref=GenBank:WP_079915362.1;Name=WP_079915362.1;Ontology_term=GO:0019058;gbkey=CDS;go_process=viral life cycle|0019058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461543.1;locus_tag=CCO56_RS19980;product=phage head-tail joining protein;protein_id=WP_079915362.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 55907 57487 . + . ID=gene-CCO56_RS19985;Name=CCO56_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19985;old_locus_tag=CCO56_19975 NZ_NPMB01000011.1 Protein Homology CDS 55907 57487 . + 0 ID=cds-WP_000831820.1;Parent=gene-CCO56_RS19985;Dbxref=GenBank:WP_000831820.1;Name=WP_000831820.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461542.1;locus_tag=CCO56_RS19985;product=phage portal protein;protein_id=WP_000831820.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 57477 58973 . + . ID=gene-CCO56_RS19990;Name=CCO56_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19990;old_locus_tag=CCO56_19980 NZ_NPMB01000011.1 Protein Homology CDS 57477 58973 . + 0 ID=cds-WP_053299759.1;Parent=gene-CCO56_RS19990;Dbxref=GenBank:WP_053299759.1;Name=WP_053299759.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461541.1;locus_tag=CCO56_RS19990;product=S49 family peptidase;protein_id=WP_053299759.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 58986 59333 . + . ID=gene-CCO56_RS19995;Name=CCO56_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS19995;old_locus_tag=CCO56_19985 NZ_NPMB01000011.1 Protein Homology CDS 58986 59333 . + 0 ID=cds-WP_000011260.1;Parent=gene-CCO56_RS19995;Dbxref=GenBank:WP_000011260.1;Name=WP_000011260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461540.1;locus_tag=CCO56_RS19995;product=head decoration protein;protein_id=WP_000011260.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 59388 60416 . + . ID=gene-CCO56_RS20000;Name=CCO56_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20000;old_locus_tag=CCO56_19990 NZ_NPMB01000011.1 Protein Homology CDS 59388 60416 . + 0 ID=cds-WP_000522566.1;Parent=gene-CCO56_RS20000;Dbxref=GenBank:WP_000522566.1;Name=WP_000522566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461539.1;locus_tag=CCO56_RS20000;product=major capsid protein;protein_id=WP_000522566.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 60474 60839 . + . ID=gene-CCO56_RS20005;Name=CCO56_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20005;old_locus_tag=CCO56_19995 NZ_NPMB01000011.1 Protein Homology CDS 60474 60839 . + 0 ID=cds-WP_000201485.1;Parent=gene-CCO56_RS20005;Dbxref=GenBank:WP_000201485.1;Name=WP_000201485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461538.1;locus_tag=CCO56_RS20005;product=DNA-packaging protein FI;protein_id=WP_000201485.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 60850 61227 . + . ID=gene-CCO56_RS20010;Name=CCO56_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20010;old_locus_tag=CCO56_20000 NZ_NPMB01000011.1 Protein Homology CDS 60850 61227 . + 0 ID=cds-WP_023225787.1;Parent=gene-CCO56_RS20010;Dbxref=GenBank:WP_023225787.1;Name=WP_023225787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083295.1;locus_tag=CCO56_RS20010;product=head-tail joining protein;protein_id=WP_023225787.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 61214 61792 . + . ID=gene-CCO56_RS20015;Name=CCO56_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20015;old_locus_tag=CCO56_20005 NZ_NPMB01000011.1 Protein Homology CDS 61214 61792 . + 0 ID=cds-WP_080177158.1;Parent=gene-CCO56_RS20015;Dbxref=GenBank:WP_080177158.1;Name=WP_080177158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461536.1;locus_tag=CCO56_RS20015;product=phage tail protein;protein_id=WP_080177158.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 61789 62190 . + . ID=gene-CCO56_RS20020;Name=CCO56_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20020;old_locus_tag=CCO56_20010 NZ_NPMB01000011.1 Protein Homology CDS 61789 62190 . + 0 ID=cds-WP_000033885.1;Parent=gene-CCO56_RS20020;Dbxref=GenBank:WP_000033885.1;Name=WP_000033885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461534.1;locus_tag=CCO56_RS20020;product=phage minor tail U family protein;protein_id=WP_000033885.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 62201 62944 . + . ID=gene-CCO56_RS20025;Name=CCO56_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20025;old_locus_tag=CCO56_20015 NZ_NPMB01000011.1 Protein Homology CDS 62201 62944 . + 0 ID=cds-WP_000537148.1;Parent=gene-CCO56_RS20025;Dbxref=GenBank:WP_000537148.1;Name=WP_000537148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000537148.1;locus_tag=CCO56_RS20025;product=phage tail tube protein;protein_id=WP_000537148.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 62995 63390 . + . ID=gene-CCO56_RS20030;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=CCO56_RS20030;old_locus_tag=CCO56_20020 NZ_NPMB01000011.1 Protein Homology CDS 62995 63390 . + 0 ID=cds-WP_000479607.1;Parent=gene-CCO56_RS20030;Dbxref=GenBank:WP_000479607.1;Name=WP_000479607.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461532.1;locus_tag=CCO56_RS20030;product=phage tail assembly chaperone G;protein_id=WP_000479607.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 63387 63725 . + . ID=gene-CCO56_RS20035;Name=CCO56_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20035;old_locus_tag=CCO56_20025 NZ_NPMB01000011.1 Protein Homology CDS 63387 63725 . + 0 ID=cds-WP_010989052.1;Parent=gene-CCO56_RS20035;Dbxref=GenBank:WP_010989052.1;Name=WP_010989052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461531.1;locus_tag=CCO56_RS20035;product=phage tail assembly protein T;protein_id=WP_010989052.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 63697 66738 . + . ID=gene-CCO56_RS20040;Name=CCO56_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20040;old_locus_tag=CCO56_20030 NZ_NPMB01000011.1 Protein Homology CDS 63697 66738 . + 0 ID=cds-WP_080177159.1;Parent=gene-CCO56_RS20040;Dbxref=GenBank:WP_080177159.1;Name=WP_080177159.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006669503.1;locus_tag=CCO56_RS20040;product=phage tail tape measure protein;protein_id=WP_080177159.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 66741 67070 . + . ID=gene-CCO56_RS20045;Name=CCO56_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20045;old_locus_tag=CCO56_20035 NZ_NPMB01000011.1 Protein Homology CDS 66741 67070 . + 0 ID=cds-WP_000447370.1;Parent=gene-CCO56_RS20045;Dbxref=GenBank:WP_000447370.1;Name=WP_000447370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461529.1;locus_tag=CCO56_RS20045;product=phage tail protein;protein_id=WP_000447370.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 67080 67778 . + . ID=gene-CCO56_RS20050;Name=CCO56_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20050;old_locus_tag=CCO56_20040 NZ_NPMB01000011.1 Protein Homology CDS 67080 67778 . + 0 ID=cds-WP_001152313.1;Parent=gene-CCO56_RS20050;Dbxref=GenBank:WP_001152313.1;Name=WP_001152313.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461528.1;locus_tag=CCO56_RS20050;product=phage minor tail protein L;protein_id=WP_001152313.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 67785 68522 . + . ID=gene-CCO56_RS20055;Name=CCO56_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20055;old_locus_tag=CCO56_20045 NZ_NPMB01000011.1 Protein Homology CDS 67785 68522 . + 0 ID=cds-WP_080177160.1;Parent=gene-CCO56_RS20055;Dbxref=GenBank:WP_080177160.1;Name=WP_080177160.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000662739.1;locus_tag=CCO56_RS20055;product=C40 family peptidase;protein_id=WP_080177160.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 68420 69067 . + . ID=gene-CCO56_RS20060;Name=CCO56_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20060;old_locus_tag=CCO56_20050 NZ_NPMB01000011.1 Protein Homology CDS 68420 69067 . + 0 ID=cds-WP_080177161.1;Parent=gene-CCO56_RS20060;Dbxref=GenBank:WP_080177161.1;Name=WP_080177161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461526.1;locus_tag=CCO56_RS20060;product=tail assembly protein;protein_id=WP_080177161.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 69130 72492 . + . ID=gene-CCO56_RS20065;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=CCO56_RS20065;old_locus_tag=CCO56_20055 NZ_NPMB01000011.1 Protein Homology CDS 69130 72492 . + 0 ID=cds-WP_080177162.1;Parent=gene-CCO56_RS20065;Dbxref=GenBank:WP_080177162.1;Name=WP_080177162.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461525.2;locus_tag=CCO56_RS20065;product=phage attachment tail tip protein J;protein_id=WP_080177162.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 72531 72773 . + . ID=gene-CCO56_RS20070;Name=CCO56_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20070;old_locus_tag=CCO56_20060 NZ_NPMB01000011.1 Protein Homology CDS 72531 72773 . + 0 ID=cds-WP_000178853.1;Parent=gene-CCO56_RS20070;Dbxref=GenBank:WP_000178853.1;Name=WP_000178853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178849.1;locus_tag=CCO56_RS20070;product=hypothetical protein;protein_id=WP_000178853.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 72827 74971 . + . ID=gene-CCO56_RS20075;Name=CCO56_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20075;old_locus_tag=CCO56_20065 NZ_NPMB01000011.1 Protein Homology CDS 72827 74971 . + 0 ID=cds-WP_080177163.1;Parent=gene-CCO56_RS20075;Dbxref=GenBank:WP_080177163.1;Name=WP_080177163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=CCO56_RS20075;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_080177163.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 74971 75546 . + . ID=gene-CCO56_RS20080;Name=CCO56_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20080;old_locus_tag=CCO56_20070 NZ_NPMB01000011.1 Protein Homology CDS 74971 75546 . + 0 ID=cds-WP_080177164.1;Parent=gene-CCO56_RS20080;Dbxref=GenBank:WP_080177164.1;Name=WP_080177164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460025.1;locus_tag=CCO56_RS20080;product=tail fiber assembly protein;protein_id=WP_080177164.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 75742 76464 . - . ID=gene-CCO56_RS20085;Name=sopE;gbkey=Gene;gene=sopE;gene_biotype=protein_coding;locus_tag=CCO56_RS20085;old_locus_tag=CCO56_20075 NZ_NPMB01000011.1 Protein Homology CDS 75742 76464 . - 0 ID=cds-WP_000161704.1;Parent=gene-CCO56_RS20085;Dbxref=GenBank:WP_000161704.1;Name=WP_000161704.1;gbkey=CDS;gene=sopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161707.1;locus_tag=CCO56_RS20085;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE;protein_id=WP_000161704.1;transl_table=11 NZ_NPMB01000011.1 RefSeq pseudogene 76674 76915 . + . ID=gene-CCO56_RS23455;Name=CCO56_RS23455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23455;partial=true;pseudo=true;start_range=.,76674 NZ_NPMB01000011.1 Protein Homology CDS 76674 76915 . + 0 ID=cds-CCO56_RS23455;Parent=gene-CCO56_RS23455;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465755.1;locus_tag=CCO56_RS23455;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,76674;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 76944 77744 . - . ID=gene-CCO56_RS20090;Name=CCO56_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20090;old_locus_tag=CCO56_20080 NZ_NPMB01000011.1 Protein Homology CDS 76944 77744 . - 0 ID=cds-WP_001536069.1;Parent=gene-CCO56_RS20090;Dbxref=GenBank:WP_001536069.1;Name=WP_001536069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586172.1;locus_tag=CCO56_RS20090;product=hypothetical protein;protein_id=WP_001536069.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 78220 78426 . - . ID=gene-CCO56_RS20095;Name=CCO56_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20095;old_locus_tag=CCO56_20085 NZ_NPMB01000011.1 Protein Homology CDS 78220 78426 . - 0 ID=cds-WP_000497440.1;Parent=gene-CCO56_RS20095;Dbxref=GenBank:WP_000497440.1;Name=WP_000497440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497442.1;locus_tag=CCO56_RS20095;product=DinI-like family protein;protein_id=WP_000497440.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 78853 81465 . + . ID=gene-CCO56_RS20100;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=CCO56_RS20100;old_locus_tag=CCO56_20090 NZ_NPMB01000011.1 Protein Homology CDS 78853 81465 . + 0 ID=cds-WP_080177165.1;Parent=gene-CCO56_RS20100;Dbxref=GenBank:WP_080177165.1;Name=WP_080177165.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=CCO56_RS20100;product=aminopeptidase N;protein_id=WP_080177165.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 81673 82683 . + . ID=gene-CCO56_RS20105;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=CCO56_RS20105;old_locus_tag=CCO56_20095 NZ_NPMB01000011.1 Protein Homology CDS 81673 82683 . + 0 ID=cds-WP_000291723.1;Parent=gene-CCO56_RS20105;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=CCO56_RS20105;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 82850 83392 . + . ID=gene-CCO56_RS20110;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=CCO56_RS20110;old_locus_tag=CCO56_20100 NZ_NPMB01000011.1 Protein Homology CDS 82850 83392 . + 0 ID=cds-WP_001220671.1;Parent=gene-CCO56_RS20110;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=CCO56_RS20110;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 83389 84498 . - . ID=gene-CCO56_RS20115;Name=CCO56_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20115;old_locus_tag=CCO56_20105 NZ_NPMB01000011.1 Protein Homology CDS 83389 84498 . - 0 ID=cds-WP_001528766.1;Parent=gene-CCO56_RS20115;Dbxref=GenBank:WP_001528766.1;Name=WP_001528766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=CCO56_RS20115;product=YcbX family protein;protein_id=WP_001528766.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 84597 86705 . + . ID=gene-CCO56_RS20120;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=CCO56_RS20120;old_locus_tag=CCO56_20110 NZ_NPMB01000011.1 Protein Homology CDS 84597 86705 . + 0 ID=cds-WP_080177166.1;Parent=gene-CCO56_RS20120;Dbxref=GenBank:WP_080177166.1;Name=WP_080177166.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=CCO56_RS20120;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_080177166.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 86718 88625 . + . ID=gene-CCO56_RS20125;Name=CCO56_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20125;old_locus_tag=CCO56_20115 NZ_NPMB01000011.1 Protein Homology CDS 86718 88625 . + 0 ID=cds-WP_000053043.1;Parent=gene-CCO56_RS20125;Dbxref=GenBank:WP_000053043.1;Name=WP_000053043.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=CCO56_RS20125;product=ABC transporter ATP-binding protein;protein_id=WP_000053043.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 88640 89893 . + . ID=gene-CCO56_RS20130;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=CCO56_RS20130;old_locus_tag=CCO56_20120 NZ_NPMB01000011.1 Protein Homology CDS 88640 89893 . + 0 ID=cds-WP_000333143.1;Parent=gene-CCO56_RS20130;Dbxref=GenBank:WP_000333143.1;Name=WP_000333143.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=CCO56_RS20130;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333143.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 89898 91538 . + . ID=gene-CCO56_RS20135;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=CCO56_RS20135;old_locus_tag=CCO56_20125 NZ_NPMB01000011.1 Protein Homology CDS 89898 91538 . + 0 ID=cds-WP_000433412.1;Parent=gene-CCO56_RS20135;Dbxref=GenBank:WP_000433412.1;Name=WP_000433412.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=CCO56_RS20135;product=intermembrane transport protein PqiB;protein_id=WP_000433412.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 91535 92098 . + . ID=gene-CCO56_RS20140;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=CCO56_RS20140;old_locus_tag=CCO56_20130 NZ_NPMB01000011.1 Protein Homology CDS 91535 92098 . + 0 ID=cds-WP_000759139.1;Parent=gene-CCO56_RS20140;Dbxref=GenBank:WP_000759139.1;Name=WP_000759139.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=CCO56_RS20140;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759139.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 92354 92521 . + . ID=gene-CCO56_RS20145;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=CCO56_RS20145;old_locus_tag=CCO56_20135 NZ_NPMB01000011.1 Protein Homology CDS 92354 92521 . + 0 ID=cds-WP_001537784.1;Parent=gene-CCO56_RS20145;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=CCO56_RS20145;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 92621 93139 . - . ID=gene-CCO56_RS20150;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=CCO56_RS20150;old_locus_tag=CCO56_20140 NZ_NPMB01000011.1 Protein Homology CDS 92621 93139 . - 0 ID=cds-WP_000227928.1;Parent=gene-CCO56_RS20150;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=CCO56_RS20150;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 93208 94968 . - . ID=gene-CCO56_RS20155;Name=CCO56_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20155;old_locus_tag=CCO56_20145 NZ_NPMB01000011.1 Protein Homology CDS 93208 94968 . - 0 ID=cds-WP_000156462.1;Parent=gene-CCO56_RS20155;Dbxref=GenBank:WP_000156462.1;Name=WP_000156462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=CCO56_RS20155;product=AAA family ATPase;protein_id=WP_000156462.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 95154 95606 . + . ID=gene-CCO56_RS20160;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=CCO56_RS20160;old_locus_tag=CCO56_20150 NZ_NPMB01000011.1 Protein Homology CDS 95154 95606 . + 0 ID=cds-WP_000877172.1;Parent=gene-CCO56_RS20160;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=CCO56_RS20160;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 95678 96730 . - . ID=gene-CCO56_RS20165;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=CCO56_RS20165;old_locus_tag=CCO56_20155 NZ_NPMB01000011.1 Protein Homology CDS 95678 96730 . - 0 ID=cds-WP_001562588.1;Parent=gene-CCO56_RS20165;Dbxref=GenBank:WP_001562588.1;Name=WP_001562588.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=CCO56_RS20165;product=porin OmpA;protein_id=WP_001562588.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 97087 97596 . - . ID=gene-CCO56_RS20170;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=CCO56_RS20170;old_locus_tag=CCO56_20160 NZ_NPMB01000011.1 Protein Homology CDS 97087 97596 . - 0 ID=cds-WP_000288730.1;Parent=gene-CCO56_RS20170;Dbxref=GenBank:WP_000288730.1;Name=WP_000288730.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=CCO56_RS20170;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288730.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 97813 98418 . + . ID=gene-CCO56_RS20175;Name=CCO56_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20175;old_locus_tag=CCO56_20165 NZ_NPMB01000011.1 Protein Homology CDS 97813 98418 . + 0 ID=cds-WP_080177167.1;Parent=gene-CCO56_RS20175;Dbxref=GenBank:WP_080177167.1;Name=WP_080177167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=CCO56_RS20175;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_080177167.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 98405 100558 . - . ID=gene-CCO56_RS20180;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=CCO56_RS20180;old_locus_tag=CCO56_20170 NZ_NPMB01000011.1 Protein Homology CDS 98405 100558 . - 0 ID=cds-WP_000950879.1;Parent=gene-CCO56_RS20180;Dbxref=GenBank:WP_000950879.1;Name=WP_000950879.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=CCO56_RS20180;product=YccS family putative transporter;protein_id=WP_000950879.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 100577 101023 . - . ID=gene-CCO56_RS20185;Name=CCO56_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20185;old_locus_tag=CCO56_20175 NZ_NPMB01000011.1 Protein Homology CDS 100577 101023 . - 0 ID=cds-WP_001261222.1;Parent=gene-CCO56_RS20185;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=CCO56_RS20185;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 101147 103201 . + . ID=gene-CCO56_RS20190;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=CCO56_RS20190;old_locus_tag=CCO56_20180 NZ_NPMB01000011.1 Protein Homology CDS 101147 103201 . + 0 ID=cds-WP_080177168.1;Parent=gene-CCO56_RS20190;Dbxref=GenBank:WP_080177168.1;Name=WP_080177168.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=CCO56_RS20190;product=DNA helicase IV;protein_id=WP_080177168.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 103237 103695 . - . ID=gene-CCO56_RS20195;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=CCO56_RS20195;old_locus_tag=CCO56_20185 NZ_NPMB01000011.1 Protein Homology CDS 103237 103695 . - 0 ID=cds-WP_000424187.1;Parent=gene-CCO56_RS20195;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=CCO56_RS20195;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 103790 104452 . - . ID=gene-CCO56_RS20200;Name=CCO56_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20200;old_locus_tag=CCO56_20190 NZ_NPMB01000011.1 Protein Homology CDS 103790 104452 . - 0 ID=cds-WP_000847732.1;Parent=gene-CCO56_RS20200;Dbxref=GenBank:WP_000847732.1;Name=WP_000847732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=CCO56_RS20200;product=DUF2057 family protein;protein_id=WP_000847732.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 104626 105039 . + . ID=gene-CCO56_RS20205;Name=CCO56_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20205;old_locus_tag=CCO56_20195 NZ_NPMB01000011.1 Protein Homology CDS 104626 105039 . + 0 ID=cds-WP_023213180.1;Parent=gene-CCO56_RS20205;Dbxref=GenBank:WP_023213180.1;Name=WP_023213180.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=CCO56_RS20205;product=CoA-binding protein;protein_id=WP_023213180.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 105084 105401 . - . ID=gene-CCO56_RS20210;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=CCO56_RS20210;old_locus_tag=CCO56_20200 NZ_NPMB01000011.1 Protein Homology CDS 105084 105401 . - 0 ID=cds-WP_000561983.1;Parent=gene-CCO56_RS20210;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=CCO56_RS20210;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 105459 106670 . - . ID=gene-CCO56_RS20215;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=CCO56_RS20215;old_locus_tag=CCO56_20205 NZ_NPMB01000011.1 Protein Homology CDS 105459 106670 . - 0 ID=cds-WP_000140480.1;Parent=gene-CCO56_RS20215;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=CCO56_RS20215;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 106885 107433 . + . ID=gene-CCO56_RS20220;Name=CCO56_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20220;old_locus_tag=CCO56_20210 NZ_NPMB01000011.1 Protein Homology CDS 106885 107433 . + 0 ID=cds-WP_000859426.1;Parent=gene-CCO56_RS20220;Dbxref=GenBank:WP_000859426.1;Name=WP_000859426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=CCO56_RS20220;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_000859426.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 107459 108238 . + . ID=gene-CCO56_RS20225;Name=CCO56_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20225;old_locus_tag=CCO56_20215 NZ_NPMB01000011.1 Protein Homology CDS 107459 108238 . + 0 ID=cds-WP_000548087.1;Parent=gene-CCO56_RS20225;Dbxref=GenBank:WP_000548087.1;Name=WP_000548087.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=CCO56_RS20225;product=helix-turn-helix transcriptional regulator;protein_id=WP_000548087.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 108287 108568 . + . ID=gene-CCO56_RS20230;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=CCO56_RS20230;old_locus_tag=CCO56_20220 NZ_NPMB01000011.1 Protein Homology CDS 108287 108568 . + 0 ID=cds-WP_000072884.1;Parent=gene-CCO56_RS20230;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=CCO56_RS20230;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 108565 108894 . - . ID=gene-CCO56_RS20235;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=CCO56_RS20235;old_locus_tag=CCO56_20225 NZ_NPMB01000011.1 Protein Homology CDS 108565 108894 . - 0 ID=cds-WP_000904446.1;Parent=gene-CCO56_RS20235;Dbxref=GenBank:WP_000904446.1;Name=WP_000904446.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=CCO56_RS20235;product=sulfurtransferase TusE;protein_id=WP_000904446.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 108981 109640 . - . ID=gene-CCO56_RS20240;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=CCO56_RS20240;old_locus_tag=CCO56_20230 NZ_NPMB01000011.1 Protein Homology CDS 108981 109640 . - 0 ID=cds-WP_000374046.1;Parent=gene-CCO56_RS20240;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=CCO56_RS20240;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 110034 110121 . + . ID=gene-CCO56_RS20245;Name=CCO56_RS20245;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS20245;old_locus_tag=CCO56_20235 NZ_NPMB01000011.1 tRNAscan-SE tRNA 110034 110121 . + . ID=rna-CCO56_RS20245;Parent=gene-CCO56_RS20245;anticodon=(pos:110068..110070);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS20245;product=tRNA-Ser NZ_NPMB01000011.1 tRNAscan-SE exon 110034 110121 . + . ID=exon-CCO56_RS20245-1;Parent=rna-CCO56_RS20245;anticodon=(pos:110068..110070);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS20245;product=tRNA-Ser NZ_NPMB01000011.1 RefSeq pseudogene 110258 110758 . - . ID=gene-CCO56_RS20250;Name=pipA;end_range=110758,.;gbkey=Gene;gene=pipA;gene_biotype=pseudogene;locus_tag=CCO56_RS20250;old_locus_tag=CCO56_20240;partial=true;pseudo=true NZ_NPMB01000011.1 Protein Homology CDS 110258 110758 . - 0 ID=cds-CCO56_RS20250;Parent=gene-CCO56_RS20250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=110758,.;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=CCO56_RS20250;partial=true;product=type III secretion system effector protease PipA;pseudo=true;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 110930 111805 . - . ID=gene-CCO56_RS20255;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=CCO56_RS20255;old_locus_tag=CCO56_20245 NZ_NPMB01000011.1 Protein Homology CDS 110930 111805 . - 0 ID=cds-WP_001123029.1;Parent=gene-CCO56_RS20255;Dbxref=GenBank:WP_001123029.1;Name=WP_001123029.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=CCO56_RS20255;product=SPI-2 type III secretion system effector PipB;protein_id=WP_001123029.1;transl_table=11 NZ_NPMB01000011.1 RefSeq pseudogene 112023 112344 . + . ID=gene-CCO56_RS23890;Name=CCO56_RS23890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23890;pseudo=true NZ_NPMB01000011.1 Protein Homology CDS 112023 112344 . + 0 ID=cds-CCO56_RS23890;Parent=gene-CCO56_RS23890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=CCO56_RS23890;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 112354 112695 . - . ID=gene-CCO56_RS20265;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=CCO56_RS20265;old_locus_tag=CCO56_20255 NZ_NPMB01000011.1 Protein Homology CDS 112354 112695 . - 0 ID=cds-WP_000444724.1;Parent=gene-CCO56_RS20265;Dbxref=GenBank:WP_000444724.1;Name=WP_000444724.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=CCO56_RS20265;product=type III secretion system chaperone SigE;protein_id=WP_000444724.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 112712 114397 . - . ID=gene-CCO56_RS20270;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=CCO56_RS20270;old_locus_tag=CCO56_20260 NZ_NPMB01000011.1 Protein Homology CDS 112712 114397 . - 0 ID=cds-WP_001166958.1;Parent=gene-CCO56_RS20270;Dbxref=GenBank:WP_001166958.1;Name=WP_001166958.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=CCO56_RS20270;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_001166958.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 114729 114899 . + . ID=gene-CCO56_RS20275;Name=CCO56_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20275;old_locus_tag=CCO56_20265 NZ_NPMB01000011.1 Protein Homology CDS 114729 114899 . + 0 ID=cds-WP_001111006.1;Parent=gene-CCO56_RS20275;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=CCO56_RS20275;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 114900 115010 . - . ID=gene-CCO56_RS20280;Name=CCO56_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20280;old_locus_tag=CCO56_20270 NZ_NPMB01000011.1 Protein Homology CDS 114900 115010 . - 0 ID=cds-WP_000174815.1;Parent=gene-CCO56_RS20280;Dbxref=GenBank:WP_000174815.1;Name=WP_000174815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=CCO56_RS20280;product=hypothetical protein;protein_id=WP_000174815.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 115119 116588 . - . ID=gene-CCO56_RS20285;Name=CCO56_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20285;old_locus_tag=CCO56_20275 NZ_NPMB01000011.1 Protein Homology CDS 115119 116588 . - 0 ID=cds-WP_080177171.1;Parent=gene-CCO56_RS20285;Dbxref=GenBank:WP_080177171.1;Name=WP_080177171.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=CCO56_RS20285;product=C69 family dipeptidase;protein_id=WP_080177171.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 116761 118125 . - . ID=gene-CCO56_RS20290;Name=CCO56_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20290;old_locus_tag=CCO56_20280 NZ_NPMB01000011.1 Protein Homology CDS 116761 118125 . - 0 ID=cds-WP_023137466.1;Parent=gene-CCO56_RS20290;Dbxref=GenBank:WP_023137466.1;Name=WP_023137466.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=CCO56_RS20290;product=heavy metal sensor histidine kinase;protein_id=WP_023137466.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 118118 118798 . - . ID=gene-CCO56_RS20295;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=CCO56_RS20295;old_locus_tag=CCO56_20285 NZ_NPMB01000011.1 Protein Homology CDS 118118 118798 . - 0 ID=cds-WP_000698217.1;Parent=gene-CCO56_RS20295;Dbxref=GenBank:WP_000698217.1;Name=WP_000698217.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=CCO56_RS20295;product=response regulator transcription factor HprR;protein_id=WP_000698217.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 118934 119344 . + . ID=gene-CCO56_RS20300;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=CCO56_RS20300;old_locus_tag=CCO56_20290 NZ_NPMB01000011.1 Protein Homology CDS 118934 119344 . + 0 ID=cds-WP_000833182.1;Parent=gene-CCO56_RS20300;Dbxref=GenBank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=CCO56_RS20300;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 119677 120189 . - . ID=gene-CCO56_RS20310;Name=CCO56_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20310;old_locus_tag=CCO56_20300 NZ_NPMB01000011.1 Protein Homology CDS 119677 120189 . - 0 ID=cds-WP_001195556.1;Parent=gene-CCO56_RS20310;Dbxref=GenBank:WP_001195556.1;Name=WP_001195556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=CCO56_RS20310;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195556.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 120207 121769 . - . ID=gene-CCO56_RS20315;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=CCO56_RS20315;old_locus_tag=CCO56_20305 NZ_NPMB01000011.1 Protein Homology CDS 120207 121769 . - 0 ID=cds-WP_000801496.1;Parent=gene-CCO56_RS20315;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=CCO56_RS20315;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 121987 122427 . - . ID=gene-CCO56_RS20320;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=CCO56_RS20320;old_locus_tag=CCO56_20310 NZ_NPMB01000011.1 Protein Homology CDS 121987 122427 . - 0 ID=cds-WP_000543922.1;Parent=gene-CCO56_RS20320;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=CCO56_RS20320;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 122702 123991 . + . ID=gene-CCO56_RS20325;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=CCO56_RS20325;old_locus_tag=CCO56_20315 NZ_NPMB01000011.1 Protein Homology CDS 122702 123991 . + 0 ID=cds-WP_023229322.1;Parent=gene-CCO56_RS20325;Dbxref=GenBank:WP_023229322.1;Name=WP_023229322.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=CCO56_RS20325;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_023229322.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 123988 125454 . + . ID=gene-CCO56_RS20330;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=CCO56_RS20330;old_locus_tag=CCO56_20320 NZ_NPMB01000011.1 Protein Homology CDS 123988 125454 . + 0 ID=cds-WP_001604519.1;Parent=gene-CCO56_RS20330;Dbxref=GenBank:WP_001604519.1;Name=WP_001604519.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=CCO56_RS20330;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_001604519.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 125456 126307 . + . ID=gene-CCO56_RS20335;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=CCO56_RS20335;old_locus_tag=CCO56_20325 NZ_NPMB01000011.1 Protein Homology CDS 125456 126307 . + 0 ID=cds-WP_000516978.1;Parent=gene-CCO56_RS20335;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=CCO56_RS20335;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 126317 126697 . + . ID=gene-CCO56_RS20340;Name=CCO56_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20340;old_locus_tag=CCO56_20330 NZ_NPMB01000011.1 Protein Homology CDS 126317 126697 . + 0 ID=cds-WP_001119849.1;Parent=gene-CCO56_RS20340;Dbxref=GenBank:WP_001119849.1;Name=WP_001119849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=CCO56_RS20340;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119849.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 126842 127645 . + . ID=gene-CCO56_RS20345;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=CCO56_RS20345;old_locus_tag=CCO56_20335 NZ_NPMB01000011.1 Protein Homology CDS 126842 127645 . + 0 ID=cds-WP_000884795.1;Parent=gene-CCO56_RS20345;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=CCO56_RS20345;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 127656 128447 . + . ID=gene-CCO56_RS20350;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=CCO56_RS20350;old_locus_tag=CCO56_20340 NZ_NPMB01000011.1 Protein Homology CDS 127656 128447 . + 0 ID=cds-WP_000785061.1;Parent=gene-CCO56_RS20350;Dbxref=GenBank:WP_000785061.1;Name=WP_000785061.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=CCO56_RS20350;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000785061.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 128520 129896 . + . ID=gene-CCO56_RS20355;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=CCO56_RS20355;old_locus_tag=CCO56_20345 NZ_NPMB01000011.1 Protein Homology CDS 128520 129896 . + 0 ID=cds-WP_001285803.1;Parent=gene-CCO56_RS20355;Dbxref=GenBank:WP_001285803.1;Name=WP_001285803.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=CCO56_RS20355;product=4-hydroxyphenylacetate permease;protein_id=WP_001285803.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 129906 130802 . + . ID=gene-CCO56_RS20360;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=CCO56_RS20360;old_locus_tag=CCO56_20350 NZ_NPMB01000011.1 Protein Homology CDS 129906 130802 . + 0 ID=cds-WP_000336602.1;Parent=gene-CCO56_RS20360;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=CCO56_RS20360;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 130816 131754 . + . ID=gene-CCO56_RS20365;Name=CCO56_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20365;old_locus_tag=CCO56_20355 NZ_NPMB01000011.1 Protein Homology CDS 130816 131754 . + 0 ID=cds-WP_023230968.1;Parent=gene-CCO56_RS20365;Dbxref=GenBank:WP_023230968.1;Name=WP_023230968.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=CCO56_RS20365;product=MBL fold metallo-hydrolase;protein_id=WP_023230968.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 132162 132524 . - . ID=gene-CCO56_RS20370;Name=CCO56_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20370;old_locus_tag=CCO56_20360 NZ_NPMB01000011.1 Protein Homology CDS 132162 132524 . - 0 ID=cds-WP_001537781.1;Parent=gene-CCO56_RS20370;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=CCO56_RS20370;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 133178 133483 . - . ID=gene-CCO56_RS20380;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=CCO56_RS20380;old_locus_tag=CCO56_20370 NZ_NPMB01000011.1 Protein Homology CDS 133178 133483 . - 0 ID=cds-WP_001284251.1;Parent=gene-CCO56_RS20380;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=CCO56_RS20380;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 133483 134403 . - . ID=gene-CCO56_RS20385;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=CCO56_RS20385;old_locus_tag=CCO56_20375 NZ_NPMB01000011.1 Protein Homology CDS 133483 134403 . - 0 ID=cds-WP_069721450.1;Parent=gene-CCO56_RS20385;Dbxref=GenBank:WP_069721450.1;Name=WP_069721450.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=CCO56_RS20385;product=curved DNA-binding protein;protein_id=WP_069721450.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 134639 135001 . + . ID=gene-CCO56_RS20395;Name=CCO56_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20395;old_locus_tag=CCO56_20385 NZ_NPMB01000011.1 Protein Homology CDS 134639 135001 . + 0 ID=cds-WP_001529150.1;Parent=gene-CCO56_RS20395;Dbxref=GenBank:WP_001529150.1;Name=WP_001529150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=CCO56_RS20395;product=hypothetical protein;protein_id=WP_001529150.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 135050 136936 . + . ID=gene-CCO56_RS20400;Name=CCO56_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20400;old_locus_tag=CCO56_20390 NZ_NPMB01000011.1 Protein Homology CDS 135050 136936 . + 0 ID=cds-WP_080177347.1;Parent=gene-CCO56_RS20400;Dbxref=GenBank:WP_080177347.1;Name=WP_080177347.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=CCO56_RS20400;product=protein-disulfide reductase DsbD family protein;protein_id=WP_080177347.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 136933 137556 . + . ID=gene-CCO56_RS20405;Name=CCO56_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20405;old_locus_tag=CCO56_20395 NZ_NPMB01000011.1 Protein Homology CDS 136933 137556 . + 0 ID=cds-WP_001529170.1;Parent=gene-CCO56_RS20405;Dbxref=GenBank:WP_001529170.1;Name=WP_001529170.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=CCO56_RS20405;product=DsbA family protein;protein_id=WP_001529170.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 137546 138052 . + . ID=gene-CCO56_RS20410;Name=CCO56_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20410;old_locus_tag=CCO56_20400 NZ_NPMB01000011.1 Protein Homology CDS 137546 138052 . + 0 ID=cds-WP_001529108.1;Parent=gene-CCO56_RS20410;Dbxref=GenBank:WP_001529108.1;Name=WP_001529108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=CCO56_RS20410;product=protein disulfide oxidoreductase;protein_id=WP_001529108.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 138185 139426 . + . ID=gene-CCO56_RS20415;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=CCO56_RS20415;old_locus_tag=CCO56_20405 NZ_NPMB01000011.1 Protein Homology CDS 138185 139426 . + 0 ID=cds-WP_001529160.1;Parent=gene-CCO56_RS20415;Dbxref=GenBank:WP_001529160.1;Name=WP_001529160.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=CCO56_RS20415;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_001529160.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 139460 139687 . - . ID=gene-CCO56_RS20420;Name=CCO56_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20420;old_locus_tag=CCO56_20410 NZ_NPMB01000011.1 Protein Homology CDS 139460 139687 . - 0 ID=cds-WP_001143125.1;Parent=gene-CCO56_RS20420;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=CCO56_RS20420;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 139708 140304 . - . ID=gene-CCO56_RS20425;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=CCO56_RS20425;old_locus_tag=CCO56_20415 NZ_NPMB01000011.1 Protein Homology CDS 139708 140304 . - 0 ID=cds-WP_001062898.1;Parent=gene-CCO56_RS20425;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=CCO56_RS20425;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 140689 140856 . + . ID=gene-CCO56_RS20430;Name=CCO56_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20430;old_locus_tag=CCO56_20420 NZ_NPMB01000011.1 Protein Homology CDS 140689 140856 . + 0 ID=cds-WP_001273663.1;Parent=gene-CCO56_RS20430;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=CCO56_RS20430;product=general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 140993 141631 . + . ID=gene-CCO56_RS20435;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=CCO56_RS20435;old_locus_tag=CCO56_20425 NZ_NPMB01000011.1 Protein Homology CDS 140993 141631 . + 0 ID=cds-WP_000083128.1;Parent=gene-CCO56_RS20435;Dbxref=GenBank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=CCO56_RS20435;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 141628 142023 . - . ID=gene-CCO56_RS20440;Name=CCO56_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20440;old_locus_tag=CCO56_20430 NZ_NPMB01000011.1 Protein Homology CDS 141628 142023 . - 0 ID=cds-WP_000821064.1;Parent=gene-CCO56_RS20440;Dbxref=GenBank:WP_000821064.1;Name=WP_000821064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=CCO56_RS20440;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821064.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 142082 146044 . - . ID=gene-CCO56_RS20445;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=CCO56_RS20445;old_locus_tag=CCO56_20435 NZ_NPMB01000011.1 Protein Homology CDS 142082 146044 . - 0 ID=cds-WP_023230965.1;Parent=gene-CCO56_RS20445;Dbxref=GenBank:WP_023230965.1;Name=WP_023230965.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=CCO56_RS20445;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_023230965.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 146466 147974 . + . ID=gene-CCO56_RS20455;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CCO56_RS20455;old_locus_tag=CCO56_20445 NZ_NPMB01000011.1 Protein Homology CDS 146466 147974 . + 0 ID=cds-WP_001018467.1;Parent=gene-CCO56_RS20455;Dbxref=GenBank:WP_001018467.1;Name=WP_001018467.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=CCO56_RS20455;product=sodium/proline symporter PutP;protein_id=WP_001018467.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 148867 149655 . + . ID=gene-CCO56_RS20465;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=CCO56_RS20465;old_locus_tag=CCO56_20455 NZ_NPMB01000011.1 Protein Homology CDS 148867 149655 . + 0 ID=cds-WP_000533527.1;Parent=gene-CCO56_RS20465;Dbxref=GenBank:WP_000533527.1;Name=WP_000533527.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=CCO56_RS20465;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533527.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 149761 150642 . - . ID=gene-CCO56_RS20470;Name=CCO56_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20470;old_locus_tag=CCO56_20460 NZ_NPMB01000011.1 Protein Homology CDS 149761 150642 . - 0 ID=cds-WP_000433674.1;Parent=gene-CCO56_RS20470;Dbxref=GenBank:WP_000433674.1;Name=WP_000433674.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=CCO56_RS20470;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433674.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 150928 152424 . - . ID=gene-CCO56_RS20475;Name=CCO56_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20475;old_locus_tag=CCO56_20465 NZ_NPMB01000011.1 Protein Homology CDS 150928 152424 . - 0 ID=cds-WP_000628085.1;Parent=gene-CCO56_RS20475;Dbxref=GenBank:WP_000628085.1;Name=WP_000628085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=CCO56_RS20475;product=sodium:solute symporter;protein_id=WP_000628085.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 152761 153441 . - . ID=gene-CCO56_RS20485;Name=CCO56_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20485;old_locus_tag=CCO56_20475 NZ_NPMB01000011.1 Protein Homology CDS 152761 153441 . - 0 ID=cds-WP_000054244.1;Parent=gene-CCO56_RS20485;Dbxref=GenBank:WP_000054244.1;Name=WP_000054244.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=CCO56_RS20485;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054244.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 153948 155108 . + . ID=gene-CCO56_RS20490;Name=CCO56_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20490;old_locus_tag=CCO56_20480 NZ_NPMB01000011.1 Protein Homology CDS 153948 155108 . + 0 ID=cds-WP_000525757.1;Parent=gene-CCO56_RS20490;Dbxref=GenBank:WP_000525757.1;Name=WP_000525757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=CCO56_RS20490;product=N-acetylneuraminate epimerase;protein_id=WP_000525757.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 155154 155846 . + . ID=gene-CCO56_RS20495;Name=CCO56_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20495;old_locus_tag=CCO56_20485 NZ_NPMB01000011.1 Protein Homology CDS 155154 155846 . + 0 ID=cds-WP_023136906.1;Parent=gene-CCO56_RS20495;Dbxref=GenBank:WP_023136906.1;Name=WP_023136906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=CCO56_RS20495;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_023136906.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 156128 157408 . + . ID=gene-CCO56_RS20500;Name=CCO56_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20500;old_locus_tag=CCO56_20490 NZ_NPMB01000011.1 Protein Homology CDS 156128 157408 . + 0 ID=cds-WP_001529094.1;Parent=gene-CCO56_RS20500;Dbxref=GenBank:WP_001529094.1;Name=WP_001529094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=CCO56_RS20500;product=MFS transporter;protein_id=WP_001529094.1;transl_table=11 NZ_NPMB01000011.1 RefSeq gene 157419 158525 . + . ID=gene-CCO56_RS20505;Name=CCO56_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20505;old_locus_tag=CCO56_20495 NZ_NPMB01000011.1 Protein Homology CDS 157419 158525 . + 0 ID=cds-WP_000988594.1;Parent=gene-CCO56_RS20505;Dbxref=GenBank:WP_000988594.1;Name=WP_000988594.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=CCO56_RS20505;product=Gfo/Idh/MocA family protein;protein_id=WP_000988594.1;transl_table=11 ##sequence-region NZ_NPMB01000012.1 1 133782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000012.1 RefSeq region 1 133782 . + . ID=NZ_NPMB01000012.1:1..133782;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000012.1 RefSeq gene 1 234 . + . ID=gene-CCO56_RS20515;Name=CCO56_RS20515;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS20515;old_locus_tag=CCO56_20505;partial=true;start_range=.,1 NZ_NPMB01000012.1 cmsearch rRNA 1 234 . + . ID=rna-CCO56_RS20515;Parent=gene-CCO56_RS20515;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS20515;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000012.1 cmsearch exon 1 234 . + . ID=exon-CCO56_RS20515-1;Parent=rna-CCO56_RS20515;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS20515;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000012.1 RefSeq gene 432 547 . + . ID=gene-CCO56_RS20520;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO56_RS20520;old_locus_tag=CCO56_20510 NZ_NPMB01000012.1 cmsearch rRNA 432 547 . + . ID=rna-CCO56_RS20520;Parent=gene-CCO56_RS20520;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS20520;product=5S ribosomal RNA NZ_NPMB01000012.1 cmsearch exon 432 547 . + . ID=exon-CCO56_RS20520-1;Parent=rna-CCO56_RS20520;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS20520;product=5S ribosomal RNA NZ_NPMB01000012.1 RefSeq gene 841 1365 . - . ID=gene-CCO56_RS20530;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CCO56_RS20530;old_locus_tag=CCO56_20520 NZ_NPMB01000012.1 Protein Homology CDS 841 1365 . - 0 ID=cds-WP_080177089.1;Parent=gene-CCO56_RS20530;Dbxref=GenBank:WP_080177089.1;Name=WP_080177089.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406202.1;locus_tag=CCO56_RS20530;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_080177089.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 1362 1946 . - . ID=gene-CCO56_RS20535;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CCO56_RS20535;old_locus_tag=CCO56_20525 NZ_NPMB01000012.1 Protein Homology CDS 1362 1946 . - 0 ID=cds-WP_001631527.1;Parent=gene-CCO56_RS20535;Dbxref=GenBank:WP_001631527.1;Name=WP_001631527.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=CCO56_RS20535;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001631527.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 2016 2285 . + . ID=gene-CCO56_RS20540;Name=CCO56_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20540;old_locus_tag=CCO56_20530 NZ_NPMB01000012.1 Protein Homology CDS 2016 2285 . + 0 ID=cds-WP_000649858.1;Parent=gene-CCO56_RS20540;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=CCO56_RS20540;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 2362 3348 . + . ID=gene-CCO56_RS20545;Name=CCO56_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20545;old_locus_tag=CCO56_20535 NZ_NPMB01000012.1 Protein Homology CDS 2362 3348 . + 0 ID=cds-WP_000999258.1;Parent=gene-CCO56_RS20545;Dbxref=GenBank:WP_000999258.1;Name=WP_000999258.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=CCO56_RS20545;product=serine/threonine protein kinase;protein_id=WP_000999258.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 3365 3988 . + . ID=gene-CCO56_RS20550;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=CCO56_RS20550;old_locus_tag=CCO56_20540 NZ_NPMB01000012.1 Protein Homology CDS 3365 3988 . + 0 ID=cds-WP_000725364.1;Parent=gene-CCO56_RS20550;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=CCO56_RS20550;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 4001 4909 . - . ID=gene-CCO56_RS20555;Name=CCO56_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20555;old_locus_tag=CCO56_20545 NZ_NPMB01000012.1 Protein Homology CDS 4001 4909 . - 0 ID=cds-WP_063916679.1;Parent=gene-CCO56_RS20555;Dbxref=GenBank:WP_063916679.1;Name=WP_063916679.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=CCO56_RS20555;product=acyltransferase;protein_id=WP_063916679.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 5297 8083 . + . ID=gene-CCO56_RS20565;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CCO56_RS20565;old_locus_tag=CCO56_20555 NZ_NPMB01000012.1 Protein Homology CDS 5297 8083 . + 0 ID=cds-WP_000249960.1;Parent=gene-CCO56_RS20565;Dbxref=GenBank:WP_000249960.1;Name=WP_000249960.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=CCO56_RS20565;product=DNA polymerase I;protein_id=WP_000249960.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 8418 9050 . - . ID=gene-CCO56_RS20570;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CCO56_RS20570;old_locus_tag=CCO56_20560 NZ_NPMB01000012.1 Protein Homology CDS 8418 9050 . - 0 ID=cds-WP_000183327.1;Parent=gene-CCO56_RS20570;Dbxref=GenBank:WP_000183327.1;Name=WP_000183327.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=CCO56_RS20570;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183327.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 9290 9514 . + . ID=gene-CCO56_RS20575;Name=CCO56_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20575;old_locus_tag=CCO56_20565 NZ_NPMB01000012.1 Protein Homology CDS 9290 9514 . + 0 ID=cds-WP_001541209.1;Parent=gene-CCO56_RS20575;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=CCO56_RS20575;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 9633 10148 . + . ID=gene-CCO56_RS20580;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=CCO56_RS20580;old_locus_tag=CCO56_20570 NZ_NPMB01000012.1 Protein Homology CDS 9633 10148 . + 0 ID=cds-WP_000743297.1;Parent=gene-CCO56_RS20580;Dbxref=GenBank:WP_000743297.1;Name=WP_000743297.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=CCO56_RS20580;product=Der GTPase-activating protein YihI;protein_id=WP_000743297.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 10337 11710 . + . ID=gene-CCO56_RS20585;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=CCO56_RS20585;old_locus_tag=CCO56_20575 NZ_NPMB01000012.1 Protein Homology CDS 10337 11710 . + 0 ID=cds-WP_000003520.1;Parent=gene-CCO56_RS20585;Dbxref=GenBank:WP_000003520.1;Name=WP_000003520.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=CCO56_RS20585;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003520.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 11800 11910 . - . ID=gene-CCO56_RS20590;Name=CCO56_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20590;old_locus_tag=CCO56_20580 NZ_NPMB01000012.1 Protein Homology CDS 11800 11910 . - 0 ID=cds-WP_001578131.1;Parent=gene-CCO56_RS20590;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=CCO56_RS20590;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 12023 13432 . - . ID=gene-CCO56_RS20595;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=CCO56_RS20595;old_locus_tag=CCO56_20585 NZ_NPMB01000012.1 Protein Homology CDS 12023 13432 . - 0 ID=cds-WP_001188773.1;Parent=gene-CCO56_RS20595;Dbxref=GenBank:WP_001188773.1;Name=WP_001188773.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=CCO56_RS20595;product=nitrogen regulation protein NR(I);protein_id=WP_001188773.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 13441 14490 . - . ID=gene-CCO56_RS20600;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=CCO56_RS20600;old_locus_tag=CCO56_20590 NZ_NPMB01000012.1 Protein Homology CDS 13441 14490 . - 0 ID=cds-WP_079957201.1;Parent=gene-CCO56_RS20600;Dbxref=GenBank:WP_079957201.1;Name=WP_079957201.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=CCO56_RS20600;product=nitrogen regulation protein NR(II);protein_id=WP_079957201.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 14765 16174 . - . ID=gene-CCO56_RS20615;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CCO56_RS20615;old_locus_tag=CCO56_20605 NZ_NPMB01000012.1 Protein Homology CDS 14765 16174 . - 0 ID=cds-WP_001271699.1;Parent=gene-CCO56_RS20615;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=CCO56_RS20615;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 16550 18373 . + . ID=gene-CCO56_RS20625;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CCO56_RS20625;old_locus_tag=CCO56_20615 NZ_NPMB01000012.1 Protein Homology CDS 16550 18373 . + 0 ID=cds-WP_000572064.1;Parent=gene-CCO56_RS20625;Dbxref=GenBank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=CCO56_RS20625;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11 NZ_NPMB01000012.1 RefSeq pseudogene 18428 18499 . - . ID=gene-CCO56_RS23895;Name=CCO56_RS23895;end_range=18499,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23895;partial=true;pseudo=true NZ_NPMB01000012.1 Protein Homology CDS 18428 18499 . - 0 ID=cds-CCO56_RS23895;Parent=gene-CCO56_RS23895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18499,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=CCO56_RS23895;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000012.1 RefSeq pseudogene 18500 18606 . - . ID=gene-CCO56_RS23565;Name=CCO56_RS23565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23565;partial=true;pseudo=true;start_range=.,18500 NZ_NPMB01000012.1 Protein Homology CDS 18500 18606 . - 0 ID=cds-CCO56_RS23565;Parent=gene-CCO56_RS23565;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=CCO56_RS23565;partial=true;product=STM4015 family protein;pseudo=true;start_range=.,18500;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 18763 19455 . - . ID=gene-CCO56_RS20630;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=CCO56_RS20630;old_locus_tag=CCO56_20620 NZ_NPMB01000012.1 Protein Homology CDS 18763 19455 . - 0 ID=cds-WP_000838829.1;Parent=gene-CCO56_RS20630;Dbxref=GenBank:WP_000838829.1;Name=WP_000838829.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=CCO56_RS20630;product=porin OmpL;protein_id=WP_000838829.1;transl_table=11 NZ_NPMB01000012.1 RefSeq pseudogene 19523 20944 . - . ID=gene-CCO56_RS20635;Name=CCO56_RS20635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS20635;old_locus_tag=CCO56_20625;pseudo=true NZ_NPMB01000012.1 Protein Homology CDS 19523 20944 . - 0 ID=cds-CCO56_RS20635;Parent=gene-CCO56_RS20635;Note=internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=CCO56_RS20635;product=MFS transporter;pseudo=true;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 20990 22372 . - . ID=gene-CCO56_RS20640;Name=CCO56_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20640;old_locus_tag=CCO56_20630 NZ_NPMB01000012.1 Protein Homology CDS 20990 22372 . - 0 ID=cds-WP_000084245.1;Parent=gene-CCO56_RS20640;Dbxref=GenBank:WP_000084245.1;Name=WP_000084245.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=CCO56_RS20640;product=MFS transporter;protein_id=WP_000084245.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 22418 24454 . - . ID=gene-CCO56_RS20645;Name=CCO56_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20645;old_locus_tag=CCO56_20635 NZ_NPMB01000012.1 Protein Homology CDS 22418 24454 . - 0 ID=cds-WP_031602024.1;Parent=gene-CCO56_RS20645;Dbxref=GenBank:WP_031602024.1;Name=WP_031602024.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=CCO56_RS20645;product=alpha-glucosidase;protein_id=WP_031602024.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 24498 25355 . - . ID=gene-CCO56_RS20650;Name=CCO56_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20650;old_locus_tag=CCO56_20640 NZ_NPMB01000012.1 Protein Homology CDS 24498 25355 . - 0 ID=cds-WP_015406200.1;Parent=gene-CCO56_RS20650;Dbxref=GenBank:WP_015406200.1;Name=WP_015406200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=CCO56_RS20650;product=aldose-1-epimerase;protein_id=WP_015406200.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 25359 26600 . - . ID=gene-CCO56_RS20655;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=CCO56_RS20655;old_locus_tag=CCO56_20645 NZ_NPMB01000012.1 Protein Homology CDS 25359 26600 . - 0 ID=cds-WP_031602025.1;Parent=gene-CCO56_RS20655;Dbxref=GenBank:WP_031602025.1;Name=WP_031602025.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=CCO56_RS20655;product=sulfoquinovose isomerase;protein_id=WP_031602025.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 26616 27494 . - . ID=gene-CCO56_RS20660;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=CCO56_RS20660;old_locus_tag=CCO56_20650 NZ_NPMB01000012.1 Protein Homology CDS 26616 27494 . - 0 ID=cds-WP_076736069.1;Parent=gene-CCO56_RS20660;Dbxref=GenBank:WP_076736069.1;Name=WP_076736069.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=CCO56_RS20660;product=sulfofructosephosphate aldolase;protein_id=WP_076736069.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 27517 28413 . - . ID=gene-CCO56_RS20665;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=CCO56_RS20665;old_locus_tag=CCO56_20655 NZ_NPMB01000012.1 Protein Homology CDS 27517 28413 . - 0 ID=cds-WP_000268248.1;Parent=gene-CCO56_RS20665;Dbxref=GenBank:WP_000268248.1;Name=WP_000268248.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=CCO56_RS20665;product=sulfolactaldehyde 3-reductase;protein_id=WP_000268248.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 28578 29474 . + . ID=gene-CCO56_RS20670;Name=CCO56_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20670;old_locus_tag=CCO56_20660 NZ_NPMB01000012.1 Protein Homology CDS 28578 29474 . + 0 ID=cds-WP_001520529.1;Parent=gene-CCO56_RS20670;Dbxref=GenBank:WP_001520529.1;Name=WP_001520529.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=CCO56_RS20670;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 29508 30311 . + . ID=gene-CCO56_RS20675;Name=CCO56_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20675;old_locus_tag=CCO56_20665 NZ_NPMB01000012.1 Protein Homology CDS 29508 30311 . + 0 ID=cds-WP_000059693.1;Parent=gene-CCO56_RS20675;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=CCO56_RS20675;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 30502 31101 . + . ID=gene-CCO56_RS20680;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=CCO56_RS20680;old_locus_tag=CCO56_20670 NZ_NPMB01000012.1 Protein Homology CDS 30502 31101 . + 0 ID=cds-WP_000965695.1;Parent=gene-CCO56_RS20680;Dbxref=GenBank:WP_000965695.1;Name=WP_000965695.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=CCO56_RS20680;product=glucose-1-phosphatase;protein_id=WP_000965695.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 31095 31967 . + . ID=gene-CCO56_RS20685;Name=CCO56_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20685;old_locus_tag=CCO56_20675 NZ_NPMB01000012.1 Protein Homology CDS 31095 31967 . + 0 ID=cds-WP_000921423.1;Parent=gene-CCO56_RS20685;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=CCO56_RS20685;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 31964 32401 . + . ID=gene-CCO56_RS20690;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CCO56_RS20690;old_locus_tag=CCO56_20680 NZ_NPMB01000012.1 Protein Homology CDS 31964 32401 . + 0 ID=cds-WP_000560969.1;Parent=gene-CCO56_RS20690;Dbxref=GenBank:WP_000560969.1;Name=WP_000560969.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=CCO56_RS20690;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560969.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 32446 33387 . + . ID=gene-CCO56_RS20695;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=CCO56_RS20695;old_locus_tag=CCO56_20685 NZ_NPMB01000012.1 Protein Homology CDS 32446 33387 . + 0 ID=cds-WP_001518251.1;Parent=gene-CCO56_RS20695;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=CCO56_RS20695;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 33402 33848 . - . ID=gene-CCO56_RS20700;Name=CCO56_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20700;old_locus_tag=CCO56_20690 NZ_NPMB01000012.1 Protein Homology CDS 33402 33848 . - 0 ID=cds-WP_001259011.1;Parent=gene-CCO56_RS20700;Dbxref=GenBank:WP_001259011.1;Name=WP_001259011.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=CCO56_RS20700;product=helix-turn-helix domain-containing protein;protein_id=WP_001259011.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 33845 34156 . - . ID=gene-CCO56_RS20705;Name=CCO56_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20705;old_locus_tag=CCO56_20695 NZ_NPMB01000012.1 Protein Homology CDS 33845 34156 . - 0 ID=cds-WP_000558166.1;Parent=gene-CCO56_RS20705;Dbxref=GenBank:WP_000558166.1;Name=WP_000558166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=CCO56_RS20705;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558166.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 34242 35171 . - . ID=gene-CCO56_RS20710;Name=CCO56_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20710;old_locus_tag=CCO56_20700 NZ_NPMB01000012.1 Protein Homology CDS 34242 35171 . - 0 ID=cds-WP_001127692.1;Parent=gene-CCO56_RS20710;Dbxref=GenBank:WP_001127692.1;Name=WP_001127692.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=CCO56_RS20710;product=alpha/beta hydrolase;protein_id=WP_001127692.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 35389 35700 . + . ID=gene-CCO56_RS20715;Name=CCO56_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20715;old_locus_tag=CCO56_20705 NZ_NPMB01000012.1 Protein Homology CDS 35389 35700 . + 0 ID=cds-WP_001159631.1;Parent=gene-CCO56_RS20715;Dbxref=GenBank:WP_001159631.1;Name=WP_001159631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=CCO56_RS20715;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159631.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 35701 35991 . + . ID=gene-CCO56_RS20720;Name=CCO56_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20720;old_locus_tag=CCO56_20710 NZ_NPMB01000012.1 Protein Homology CDS 35701 35991 . + 0 ID=cds-WP_000362052.1;Parent=gene-CCO56_RS20720;Dbxref=GenBank:WP_000362052.1;Name=WP_000362052.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=CCO56_RS20720;product=helix-turn-helix domain-containing protein;protein_id=WP_000362052.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 36038 36967 . - . ID=gene-CCO56_RS20725;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=CCO56_RS20725;old_locus_tag=CCO56_20715 NZ_NPMB01000012.1 Protein Homology CDS 36038 36967 . - 0 ID=cds-WP_000027730.1;Parent=gene-CCO56_RS20725;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=CCO56_RS20725;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 36964 37599 . - . ID=gene-CCO56_RS20730;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=CCO56_RS20730;old_locus_tag=CCO56_20720 NZ_NPMB01000012.1 Protein Homology CDS 36964 37599 . - 0 ID=cds-WP_000829025.1;Parent=gene-CCO56_RS20730;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=CCO56_RS20730;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 37596 38498 . - . ID=gene-CCO56_RS20735;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO56_RS20735;old_locus_tag=CCO56_20725 NZ_NPMB01000012.1 Protein Homology CDS 37596 38498 . - 0 ID=cds-WP_000331361.1;Parent=gene-CCO56_RS20735;Dbxref=GenBank:WP_000331361.1;Name=WP_000331361.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=CCO56_RS20735;product=formate dehydrogenase subunit beta;protein_id=WP_000331361.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 38511 41561 . - . ID=gene-CCO56_RS20740;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO56_RS20740;old_locus_tag=CCO56_20730 NZ_NPMB01000012.1 Protein Homology CDS 38511 41561 . - 0 ID=cds-WP_077248424.1;Parent=gene-CCO56_RS20740;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=CCO56_RS20740;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:complement(40974..40976)%2Caa:Sec);transl_table=11 NZ_NPMB01000012.1 RefSeq gene 41756 42592 . + . ID=gene-CCO56_RS20745;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CCO56_RS20745;old_locus_tag=CCO56_20735 NZ_NPMB01000012.1 Protein Homology CDS 41756 42592 . + 0 ID=cds-WP_001059735.1;Parent=gene-CCO56_RS20745;Dbxref=GenBank:WP_001059735.1;Name=WP_001059735.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=CCO56_RS20745;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059735.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 42785 43885 . + . ID=gene-CCO56_RS20750;Name=CCO56_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20750;old_locus_tag=CCO56_20740 NZ_NPMB01000012.1 Protein Homology CDS 42785 43885 . + 0 ID=cds-WP_080177088.1;Parent=gene-CCO56_RS20750;Dbxref=GenBank:WP_080177088.1;Name=WP_080177088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=CCO56_RS20750;product=YiiG family protein;protein_id=WP_080177088.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 44240 44563 . - . ID=gene-CCO56_RS20755;Name=CCO56_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20755;old_locus_tag=CCO56_20745 NZ_NPMB01000012.1 Protein Homology CDS 44240 44563 . - 0 ID=cds-WP_000527677.1;Parent=gene-CCO56_RS20755;Dbxref=GenBank:WP_000527677.1;Name=WP_000527677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=CCO56_RS20755;product=AzlD domain-containing protein;protein_id=WP_000527677.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 44563 45222 . - . ID=gene-CCO56_RS20760;Name=CCO56_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20760;old_locus_tag=CCO56_20750 NZ_NPMB01000012.1 Protein Homology CDS 44563 45222 . - 0 ID=cds-WP_000683586.1;Parent=gene-CCO56_RS20760;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=CCO56_RS20760;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 45323 45871 . + . ID=gene-CCO56_RS20765;Name=CCO56_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20765;old_locus_tag=CCO56_20755 NZ_NPMB01000012.1 Protein Homology CDS 45323 45871 . + 0 ID=cds-WP_001517951.1;Parent=gene-CCO56_RS20765;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=CCO56_RS20765;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 45960 46274 . - . ID=gene-CCO56_RS20770;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=CCO56_RS20770;old_locus_tag=CCO56_20760 NZ_NPMB01000012.1 Protein Homology CDS 45960 46274 . - 0 ID=cds-WP_000619478.1;Parent=gene-CCO56_RS20770;Dbxref=GenBank:WP_000619478.1;Name=WP_000619478.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=CCO56_RS20770;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 46271 47419 . - . ID=gene-CCO56_RS20775;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO56_RS20775;old_locus_tag=CCO56_20765 NZ_NPMB01000012.1 Protein Homology CDS 46271 47419 . - 0 ID=cds-WP_000009247.1;Parent=gene-CCO56_RS20775;Dbxref=GenBank:WP_000009247.1;Name=WP_000009247.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=CCO56_RS20775;product=lactaldehyde reductase;protein_id=WP_000009247.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 47545 48372 . - . ID=gene-CCO56_RS20780;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=CCO56_RS20780;old_locus_tag=CCO56_20770 NZ_NPMB01000012.1 Protein Homology CDS 47545 48372 . - 0 ID=cds-WP_001179685.1;Parent=gene-CCO56_RS20780;Dbxref=GenBank:WP_001179685.1;Name=WP_001179685.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=CCO56_RS20780;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179685.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 48515 49774 . - . ID=gene-CCO56_RS20785;Name=CCO56_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20785;old_locus_tag=CCO56_20775 NZ_NPMB01000012.1 Protein Homology CDS 48515 49774 . - 0 ID=cds-WP_001636298.1;Parent=gene-CCO56_RS20785;Dbxref=GenBank:WP_001636298.1;Name=WP_001636298.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=CCO56_RS20785;product=L-rhamnose isomerase;protein_id=WP_001636298.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 49771 51240 . - . ID=gene-CCO56_RS20790;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=CCO56_RS20790;old_locus_tag=CCO56_20780 NZ_NPMB01000012.1 Protein Homology CDS 49771 51240 . - 0 ID=cds-WP_000143972.1;Parent=gene-CCO56_RS20790;Dbxref=GenBank:WP_000143972.1;Name=WP_000143972.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=CCO56_RS20790;product=rhamnulokinase;protein_id=WP_000143972.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 51528 52364 . + . ID=gene-CCO56_RS20795;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=CCO56_RS20795;old_locus_tag=CCO56_20785 NZ_NPMB01000012.1 Protein Homology CDS 51528 52364 . + 0 ID=cds-WP_001636299.1;Parent=gene-CCO56_RS20795;Dbxref=GenBank:WP_001636299.1;Name=WP_001636299.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=CCO56_RS20795;product=HTH-type transcriptional activator RhaS;protein_id=WP_001636299.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 52517 53365 . + . ID=gene-CCO56_RS20800;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=CCO56_RS20800;old_locus_tag=CCO56_20790 NZ_NPMB01000012.1 Protein Homology CDS 52517 53365 . + 0 ID=cds-WP_000013292.1;Parent=gene-CCO56_RS20800;Dbxref=GenBank:WP_000013292.1;Name=WP_000013292.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=CCO56_RS20800;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013292.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 53362 54396 . - . ID=gene-CCO56_RS20805;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=CCO56_RS20805;old_locus_tag=CCO56_20795 NZ_NPMB01000012.1 Protein Homology CDS 53362 54396 . - 0 ID=cds-WP_000063541.1;Parent=gene-CCO56_RS20805;Dbxref=GenBank:WP_000063541.1;Name=WP_000063541.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=CCO56_RS20805;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063541.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 55016 55699 . + . ID=gene-CCO56_RS20810;Name=CCO56_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20810;old_locus_tag=CCO56_20800 NZ_NPMB01000012.1 Protein Homology CDS 55016 55699 . + 0 ID=cds-WP_000378716.1;Parent=gene-CCO56_RS20810;Dbxref=GenBank:WP_000378716.1;Name=WP_000378716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=CCO56_RS20810;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378716.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 55857 57164 . - . ID=gene-CCO56_RS20815;Name=CCO56_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20815;old_locus_tag=CCO56_20805 NZ_NPMB01000012.1 Protein Homology CDS 55857 57164 . - 0 ID=cds-WP_000566800.1;Parent=gene-CCO56_RS20815;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=CCO56_RS20815;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 57157 57672 . - . ID=gene-CCO56_RS20820;Name=CCO56_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20820;old_locus_tag=CCO56_20810 NZ_NPMB01000012.1 Protein Homology CDS 57157 57672 . - 0 ID=cds-WP_001091413.1;Parent=gene-CCO56_RS20820;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=CCO56_RS20820;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 57691 58674 . - . ID=gene-CCO56_RS20825;Name=CCO56_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20825;old_locus_tag=CCO56_20815 NZ_NPMB01000012.1 Protein Homology CDS 57691 58674 . - 0 ID=cds-WP_001661631.1;Parent=gene-CCO56_RS20825;Dbxref=GenBank:WP_001661631.1;Name=WP_001661631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=CCO56_RS20825;product=TRAP transporter substrate-binding protein;protein_id=WP_001661631.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 59003 59623 . + . ID=gene-CCO56_RS20830;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=CCO56_RS20830;old_locus_tag=CCO56_20820 NZ_NPMB01000012.1 Protein Homology CDS 59003 59623 . + 0 ID=cds-WP_000122632.1;Parent=gene-CCO56_RS20830;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=CCO56_RS20830;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 59693 60382 . + . ID=gene-CCO56_RS20835;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=CCO56_RS20835;old_locus_tag=CCO56_20825 NZ_NPMB01000012.1 Protein Homology CDS 59693 60382 . + 0 ID=cds-WP_000559227.1;Parent=gene-CCO56_RS20835;Dbxref=GenBank:WP_000559227.1;Name=WP_000559227.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=CCO56_RS20835;product=6-hydroxyaminopurine reductase;protein_id=WP_000559227.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 60394 60789 . + . ID=gene-CCO56_RS20840;Name=CCO56_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20840;old_locus_tag=CCO56_20830 NZ_NPMB01000012.1 Protein Homology CDS 60394 60789 . + 0 ID=cds-WP_000133441.1;Parent=gene-CCO56_RS20840;Dbxref=GenBank:WP_000133441.1;Name=WP_000133441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=CCO56_RS20840;product=nuclear transport factor 2 family protein;protein_id=WP_000133441.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 60840 62213 . - . ID=gene-CCO56_RS20845;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=CCO56_RS20845;old_locus_tag=CCO56_20835 NZ_NPMB01000012.1 Protein Homology CDS 60840 62213 . - 0 ID=cds-WP_000580402.1;Parent=gene-CCO56_RS20845;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=CCO56_RS20845;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 62210 62908 . - . ID=gene-CCO56_RS20850;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=CCO56_RS20850;old_locus_tag=CCO56_20840 NZ_NPMB01000012.1 Protein Homology CDS 62210 62908 . - 0 ID=cds-WP_001033731.1;Parent=gene-CCO56_RS20850;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=CCO56_RS20850;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 63059 63559 . + . ID=gene-CCO56_RS20855;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=CCO56_RS20855;old_locus_tag=CCO56_20845 NZ_NPMB01000012.1 Protein Homology CDS 63059 63559 . + 0 ID=cds-WP_001233463.1;Parent=gene-CCO56_RS20855;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=CCO56_RS20855;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 63707 64609 . + . ID=gene-CCO56_RS20860;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=CCO56_RS20860;old_locus_tag=CCO56_20850 NZ_NPMB01000012.1 Protein Homology CDS 63707 64609 . + 0 ID=cds-WP_001077321.1;Parent=gene-CCO56_RS20860;Dbxref=GenBank:WP_001077321.1;Name=WP_001077321.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=CCO56_RS20860;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077321.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 64794 65756 . + . ID=gene-CCO56_RS20865;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CCO56_RS20865;old_locus_tag=CCO56_20855 NZ_NPMB01000012.1 Protein Homology CDS 64794 65756 . + 0 ID=cds-WP_000591793.1;Parent=gene-CCO56_RS20865;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=CCO56_RS20865;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 65960 66949 . + . ID=gene-CCO56_RS20870;Name=CCO56_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20870;old_locus_tag=CCO56_20860 NZ_NPMB01000012.1 Protein Homology CDS 65960 66949 . + 0 ID=cds-WP_000758706.1;Parent=gene-CCO56_RS20870;Dbxref=GenBank:WP_000758706.1;Name=WP_000758706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=CCO56_RS20870;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758706.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 67050 67805 . + . ID=gene-CCO56_RS20875;Name=CCO56_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20875;old_locus_tag=CCO56_20865 NZ_NPMB01000012.1 Protein Homology CDS 67050 67805 . + 0 ID=cds-WP_000750757.1;Parent=gene-CCO56_RS20875;Dbxref=GenBank:WP_000750757.1;Name=WP_000750757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO56_RS20875;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750757.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 68068 69402 . + . ID=gene-CCO56_RS20880;Name=CCO56_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20880;old_locus_tag=CCO56_20870 NZ_NPMB01000012.1 Protein Homology CDS 68068 69402 . + 0 ID=cds-WP_080177087.1;Parent=gene-CCO56_RS20880;Dbxref=GenBank:WP_080177087.1;Name=WP_080177087.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=CCO56_RS20880;product=MFS transporter;protein_id=WP_080177087.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 69413 70372 . + . ID=gene-CCO56_RS20885;Name=CCO56_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20885;old_locus_tag=CCO56_20875 NZ_NPMB01000012.1 Protein Homology CDS 69413 70372 . + 0 ID=cds-WP_080177086.1;Parent=gene-CCO56_RS20885;Dbxref=GenBank:WP_080177086.1;Name=WP_080177086.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=CCO56_RS20885;product=aminoimidazole riboside kinase;protein_id=WP_080177086.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 70382 71422 . + . ID=gene-CCO56_RS20890;Name=CCO56_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20890;old_locus_tag=CCO56_20880 NZ_NPMB01000012.1 Protein Homology CDS 70382 71422 . + 0 ID=cds-WP_000557882.1;Parent=gene-CCO56_RS20890;Dbxref=GenBank:WP_000557882.1;Name=WP_000557882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=CCO56_RS20890;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557882.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 71485 72207 . + . ID=gene-CCO56_RS20895;Name=CCO56_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20895;old_locus_tag=CCO56_20885 NZ_NPMB01000012.1 Protein Homology CDS 71485 72207 . + 0 ID=cds-WP_001518326.1;Parent=gene-CCO56_RS20895;Dbxref=GenBank:WP_001518326.1;Name=WP_001518326.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=CCO56_RS20895;product=GntR family transcriptional regulator;protein_id=WP_001518326.1;transl_table=11 NZ_NPMB01000012.1 RefSeq pseudogene 72305 72430 . + . ID=gene-CCO56_RS20900;Name=CCO56_RS20900;end_range=72430,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS20900;old_locus_tag=CCO56_20890;partial=true;pseudo=true NZ_NPMB01000012.1 Protein Homology CDS 72305 72430 . + 0 ID=cds-CCO56_RS20900;Parent=gene-CCO56_RS20900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=72430,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=CCO56_RS20900;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000012.1 RefSeq pseudogene 72476 72616 . + . ID=gene-CCO56_RS20905;Name=CCO56_RS20905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS20905;old_locus_tag=CCO56_20895;partial=true;pseudo=true;start_range=.,72476 NZ_NPMB01000012.1 Protein Homology CDS 72476 72616 . + 0 ID=cds-CCO56_RS20905;Parent=gene-CCO56_RS20905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO56_RS20905;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;start_range=.,72476;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 72706 73056 . - . ID=gene-CCO56_RS20910;Name=CCO56_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20910;old_locus_tag=CCO56_20900 NZ_NPMB01000012.1 Protein Homology CDS 72706 73056 . - 0 ID=cds-WP_001173080.1;Parent=gene-CCO56_RS20910;Dbxref=GenBank:WP_001173080.1;Name=WP_001173080.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=CCO56_RS20910;product=cupin domain-containing protein;protein_id=WP_001173080.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 73070 74662 . - . ID=gene-CCO56_RS20915;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=CCO56_RS20915;old_locus_tag=CCO56_20905 NZ_NPMB01000012.1 Protein Homology CDS 73070 74662 . - 0 ID=cds-WP_000113084.1;Parent=gene-CCO56_RS20915;Dbxref=GenBank:WP_000113084.1;Name=WP_000113084.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=CCO56_RS20915;product=autoinducer-2 kinase;protein_id=WP_000113084.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 74749 75708 . - . ID=gene-CCO56_RS20920;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=CCO56_RS20920;old_locus_tag=CCO56_20910 NZ_NPMB01000012.1 Protein Homology CDS 74749 75708 . - 0 ID=cds-WP_001283049.1;Parent=gene-CCO56_RS20920;Dbxref=GenBank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=CCO56_RS20920;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 75964 77499 . + . ID=gene-CCO56_RS20925;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=CCO56_RS20925;old_locus_tag=CCO56_20915 NZ_NPMB01000012.1 Protein Homology CDS 75964 77499 . + 0 ID=cds-WP_001167248.1;Parent=gene-CCO56_RS20925;Dbxref=GenBank:WP_001167248.1;Name=WP_001167248.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=CCO56_RS20925;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167248.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 77493 78536 . + . ID=gene-CCO56_RS20930;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=CCO56_RS20930;old_locus_tag=CCO56_20920 NZ_NPMB01000012.1 Protein Homology CDS 77493 78536 . + 0 ID=cds-WP_080177085.1;Parent=gene-CCO56_RS20930;Dbxref=GenBank:WP_080177085.1;Name=WP_080177085.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=CCO56_RS20930;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_080177085.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 78536 79534 . + . ID=gene-CCO56_RS20935;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=CCO56_RS20935;old_locus_tag=CCO56_20925 NZ_NPMB01000012.1 Protein Homology CDS 78536 79534 . + 0 ID=cds-WP_001070414.1;Parent=gene-CCO56_RS20935;Dbxref=GenBank:WP_001070414.1;Name=WP_001070414.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681907.1;locus_tag=CCO56_RS20935;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_001070414.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 79563 80585 . + . ID=gene-CCO56_RS20940;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=CCO56_RS20940;old_locus_tag=CCO56_20930 NZ_NPMB01000012.1 Protein Homology CDS 79563 80585 . + 0 ID=cds-WP_000090739.1;Parent=gene-CCO56_RS20940;Dbxref=GenBank:WP_000090739.1;Name=WP_000090739.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=CCO56_RS20940;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090739.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 80614 81489 . + . ID=gene-CCO56_RS20945;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=CCO56_RS20945;old_locus_tag=CCO56_20935 NZ_NPMB01000012.1 Protein Homology CDS 80614 81489 . + 0 ID=cds-WP_000774146.1;Parent=gene-CCO56_RS20945;Dbxref=GenBank:WP_000774146.1;Name=WP_000774146.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=CCO56_RS20945;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774146.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 81572 81862 . + . ID=gene-CCO56_RS20950;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=CCO56_RS20950;old_locus_tag=CCO56_20940 NZ_NPMB01000012.1 Protein Homology CDS 81572 81862 . + 0 ID=cds-WP_001543603.1;Parent=gene-CCO56_RS20950;Dbxref=GenBank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=CCO56_RS20950;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 81872 82636 . + . ID=gene-CCO56_RS20955;Name=CCO56_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20955;old_locus_tag=CCO56_20945 NZ_NPMB01000012.1 Protein Homology CDS 81872 82636 . + 0 ID=cds-WP_001088052.1;Parent=gene-CCO56_RS20955;Dbxref=GenBank:WP_001088052.1;Name=WP_001088052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=CCO56_RS20955;product=epimerase;protein_id=WP_001088052.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 82728 83495 . - . ID=gene-CCO56_RS20960;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CCO56_RS20960;old_locus_tag=CCO56_20950 NZ_NPMB01000012.1 Protein Homology CDS 82728 83495 . - 0 ID=cds-WP_001216339.1;Parent=gene-CCO56_RS20960;Dbxref=GenBank:WP_001216339.1;Name=WP_001216339.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=CCO56_RS20960;product=triose-phosphate isomerase;protein_id=WP_001216339.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 83608 84204 . - . ID=gene-CCO56_RS20965;Name=CCO56_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20965;old_locus_tag=CCO56_20955 NZ_NPMB01000012.1 Protein Homology CDS 83608 84204 . - 0 ID=cds-WP_000802241.1;Parent=gene-CCO56_RS20965;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=CCO56_RS20965;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 84305 84733 . + . ID=gene-CCO56_RS20970;Name=CCO56_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20970;old_locus_tag=CCO56_20960 NZ_NPMB01000012.1 Protein Homology CDS 84305 84733 . + 0 ID=cds-WP_000155237.1;Parent=gene-CCO56_RS20970;Dbxref=GenBank:WP_000155237.1;Name=WP_000155237.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=CCO56_RS20970;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 84840 85586 . - . ID=gene-CCO56_RS20975;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=CCO56_RS20975;old_locus_tag=CCO56_20965 NZ_NPMB01000012.1 Protein Homology CDS 84840 85586 . - 0 ID=cds-WP_000796302.1;Parent=gene-CCO56_RS20975;Dbxref=GenBank:WP_000796302.1;Name=WP_000796302.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=CCO56_RS20975;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796302.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 85683 86693 . - . ID=gene-CCO56_RS20980;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO56_RS20980;old_locus_tag=CCO56_20970 NZ_NPMB01000012.1 Protein Homology CDS 85683 86693 . - 0 ID=cds-WP_001250624.1;Parent=gene-CCO56_RS20980;Dbxref=GenBank:WP_001250624.1;Name=WP_001250624.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=CCO56_RS20980;product=class II fructose-bisphosphatase;protein_id=WP_001250624.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 86805 88313 . - . ID=gene-CCO56_RS20985;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CCO56_RS20985;old_locus_tag=CCO56_20975 NZ_NPMB01000012.1 Protein Homology CDS 86805 88313 . - 0 ID=cds-WP_001523753.1;Parent=gene-CCO56_RS20985;Dbxref=GenBank:WP_001523753.1;Name=WP_001523753.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=CCO56_RS20985;product=glycerol kinase GlpK;protein_id=WP_001523753.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 88334 89179 . - . ID=gene-CCO56_RS20990;Name=CCO56_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS20990;old_locus_tag=CCO56_20980 NZ_NPMB01000012.1 Protein Homology CDS 88334 89179 . - 0 ID=cds-WP_000084285.1;Parent=gene-CCO56_RS20990;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=CCO56_RS20990;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 89578 89817 . + . ID=gene-CCO56_RS20995;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=CCO56_RS20995;old_locus_tag=CCO56_20985 NZ_NPMB01000012.1 Protein Homology CDS 89578 89817 . + 0 ID=cds-WP_000051370.1;Parent=gene-CCO56_RS20995;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=CCO56_RS20995;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 90039 90524 . - . ID=gene-CCO56_RS21000;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=CCO56_RS21000;old_locus_tag=CCO56_20990 NZ_NPMB01000012.1 Protein Homology CDS 90039 90524 . - 0 ID=cds-WP_000872918.1;Parent=gene-CCO56_RS21000;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=CCO56_RS21000;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 90617 91546 . - . ID=gene-CCO56_RS21005;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=CCO56_RS21005;old_locus_tag=CCO56_20995 NZ_NPMB01000012.1 Protein Homology CDS 90617 91546 . - 0 ID=cds-WP_000139639.1;Parent=gene-CCO56_RS21005;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=CCO56_RS21005;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 91613 92944 . - . ID=gene-CCO56_RS21010;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CCO56_RS21010;old_locus_tag=CCO56_21000 NZ_NPMB01000012.1 Protein Homology CDS 91613 92944 . - 0 ID=cds-WP_001293360.1;Parent=gene-CCO56_RS21010;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=CCO56_RS21010;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293360.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 92954 93484 . - . ID=gene-CCO56_RS21015;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CCO56_RS21015;old_locus_tag=CCO56_21005 NZ_NPMB01000012.1 Protein Homology CDS 92954 93484 . - 0 ID=cds-WP_000208240.1;Parent=gene-CCO56_RS21015;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=CCO56_RS21015;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 93576 94559 . - . ID=gene-CCO56_RS21020;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=CCO56_RS21020;old_locus_tag=CCO56_21010 NZ_NPMB01000012.1 Protein Homology CDS 93576 94559 . - 0 ID=cds-WP_000068805.1;Parent=gene-CCO56_RS21020;Dbxref=GenBank:WP_000068805.1;Name=WP_000068805.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=CCO56_RS21020;product=cell division protein FtsN;protein_id=WP_000068805.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 94653 95678 . - . ID=gene-CCO56_RS21025;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=CCO56_RS21025;old_locus_tag=CCO56_21015 NZ_NPMB01000012.1 Protein Homology CDS 94653 95678 . - 0 ID=cds-WP_000841337.1;Parent=gene-CCO56_RS21025;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=CCO56_RS21025;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 95833 98031 . - . ID=gene-CCO56_RS21030;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CCO56_RS21030;old_locus_tag=CCO56_21020 NZ_NPMB01000012.1 Protein Homology CDS 95833 98031 . - 0 ID=cds-WP_000109403.1;Parent=gene-CCO56_RS21030;Dbxref=GenBank:WP_000109403.1;Name=WP_000109403.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=CCO56_RS21030;product=primosomal protein N';protein_id=WP_000109403.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 98235 98447 . + . ID=gene-CCO56_RS21035;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=CCO56_RS21035;old_locus_tag=CCO56_21025 NZ_NPMB01000012.1 Protein Homology CDS 98235 98447 . + 0 ID=cds-WP_000715284.1;Parent=gene-CCO56_RS21035;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=CCO56_RS21035;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 98492 99154 . - . ID=gene-CCO56_RS21040;Name=CCO56_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21040;old_locus_tag=CCO56_21030 NZ_NPMB01000012.1 Protein Homology CDS 98492 99154 . - 0 ID=cds-WP_023233053.1;Parent=gene-CCO56_RS21040;Dbxref=GenBank:WP_023233053.1;Name=WP_023233053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=CCO56_RS21040;product=TIGR02117 family protein;protein_id=WP_023233053.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 99355 101145 . - . ID=gene-CCO56_RS21045;Name=CCO56_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21045;old_locus_tag=CCO56_21035 NZ_NPMB01000012.1 Protein Homology CDS 99355 101145 . - 0 ID=cds-WP_023251908.1;Parent=gene-CCO56_RS21045;Dbxref=GenBank:WP_023251908.1;Name=WP_023251908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=CCO56_RS21045;product=aryl-sulfate sulfotransferase;protein_id=WP_023251908.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 101603 101920 . - . ID=gene-CCO56_RS21050;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=CCO56_RS21050;old_locus_tag=CCO56_21040 NZ_NPMB01000012.1 Protein Homology CDS 101603 101920 . - 0 ID=cds-WP_000852811.1;Parent=gene-CCO56_RS21050;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=CCO56_RS21050;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 102185 103345 . + . ID=gene-CCO56_RS21055;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=CCO56_RS21055;old_locus_tag=CCO56_21045 NZ_NPMB01000012.1 Protein Homology CDS 102185 103345 . + 0 ID=cds-WP_000197211.1;Parent=gene-CCO56_RS21055;Dbxref=GenBank:WP_000197211.1;Name=WP_000197211.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=CCO56_RS21055;product=cystathionine gamma-synthase;protein_id=WP_000197211.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 103348 105780 . + . ID=gene-CCO56_RS21060;Name=CCO56_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21060;old_locus_tag=CCO56_21050 NZ_NPMB01000012.1 Protein Homology CDS 103348 105780 . + 0 ID=cds-WP_000110805.1;Parent=gene-CCO56_RS21060;Dbxref=GenBank:WP_000110805.1;Name=WP_000110805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=CCO56_RS21060;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110805.1;transl_table=11 NZ_NPMB01000012.1 RefSeq pseudogene 105843 106273 . - . ID=gene-CCO56_RS23470;Name=CCO56_RS23470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23470;pseudo=true NZ_NPMB01000012.1 Protein Homology CDS 105843 106273 . - 0 ID=cds-CCO56_RS23470;Parent=gene-CCO56_RS23470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=CCO56_RS23470;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 106508 107632 . - . ID=gene-CCO56_RS21075;Name=CCO56_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21075;old_locus_tag=CCO56_21065 NZ_NPMB01000012.1 Protein Homology CDS 106508 107632 . - 0 ID=cds-WP_080177082.1;Parent=gene-CCO56_RS21075;Dbxref=GenBank:WP_080177082.1;Name=WP_080177082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=CCO56_RS21075;product=cytoplasmic protein;protein_id=WP_080177082.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 107768 109324 . + . ID=gene-CCO56_RS21080;Name=CCO56_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21080;old_locus_tag=CCO56_21070 NZ_NPMB01000012.1 Protein Homology CDS 107768 109324 . + 0 ID=cds-WP_094882071.1;Parent=gene-CCO56_RS21080;Dbxref=GenBank:WP_094882071.1;Name=WP_094882071.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=CCO56_RS21080;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_094882071.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 109519 110409 . + . ID=gene-CCO56_RS21085;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=CCO56_RS21085;old_locus_tag=CCO56_21075 NZ_NPMB01000012.1 Protein Homology CDS 109519 110409 . + 0 ID=cds-WP_000007507.1;Parent=gene-CCO56_RS21085;Dbxref=GenBank:WP_000007507.1;Name=WP_000007507.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=CCO56_RS21085;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 110574 112754 . + . ID=gene-CCO56_RS21090;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=CCO56_RS21090;old_locus_tag=CCO56_21080 NZ_NPMB01000012.1 Protein Homology CDS 110574 112754 . + 0 ID=cds-WP_000108117.1;Parent=gene-CCO56_RS21090;Dbxref=GenBank:WP_000108117.1;Name=WP_000108117.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312898.1;locus_tag=CCO56_RS21090;product=catalase/peroxidase HPI;protein_id=WP_000108117.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 112861 113964 . - . ID=gene-CCO56_RS21095;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=CCO56_RS21095;old_locus_tag=CCO56_21085 NZ_NPMB01000012.1 Protein Homology CDS 112861 113964 . - 0 ID=cds-WP_000374031.1;Parent=gene-CCO56_RS21095;Dbxref=GenBank:WP_000374031.1;Name=WP_000374031.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=CCO56_RS21095;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374031.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 113976 114638 . - . ID=gene-CCO56_RS21100;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CCO56_RS21100;old_locus_tag=CCO56_21090 NZ_NPMB01000012.1 Protein Homology CDS 113976 114638 . - 0 ID=cds-WP_000424866.1;Parent=gene-CCO56_RS21100;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=CCO56_RS21100;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 114893 115729 . - . ID=gene-CCO56_RS21105;Name=CCO56_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21105;old_locus_tag=CCO56_21095 NZ_NPMB01000012.1 Protein Homology CDS 114893 115729 . - 0 ID=cds-WP_000274595.1;Parent=gene-CCO56_RS21105;Dbxref=GenBank:WP_000274595.1;Name=WP_000274595.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=CCO56_RS21105;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274595.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 115890 117623 . - . ID=gene-CCO56_RS21110;Name=CCO56_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21110;old_locus_tag=CCO56_21100 NZ_NPMB01000012.1 Protein Homology CDS 115890 117623 . - 0 ID=cds-WP_001192092.1;Parent=gene-CCO56_RS21110;Dbxref=GenBank:WP_001192092.1;Name=WP_001192092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=CCO56_RS21110;product=phosphoethanolamine transferase CptA;protein_id=WP_001192092.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 117834 120485 . - . ID=gene-CCO56_RS21115;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=CCO56_RS21115;old_locus_tag=CCO56_21105 NZ_NPMB01000012.1 Protein Homology CDS 117834 120485 . - 0 ID=cds-WP_001005549.1;Parent=gene-CCO56_RS21115;Dbxref=GenBank:WP_001005549.1;Name=WP_001005549.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=CCO56_RS21115;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005549.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 120877 122028 . - . ID=gene-CCO56_RS21125;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=CCO56_RS21125;old_locus_tag=CCO56_21110 NZ_NPMB01000012.1 Protein Homology CDS 120877 122028 . - 0 ID=cds-WP_080177081.1;Parent=gene-CCO56_RS21125;Dbxref=GenBank:WP_080177081.1;Name=WP_080177081.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=CCO56_RS21125;product=acetylornithine deacetylase;protein_id=WP_080177081.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 122117 123121 . + . ID=gene-CCO56_RS21130;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=CCO56_RS21130;old_locus_tag=CCO56_21115 NZ_NPMB01000012.1 Protein Homology CDS 122117 123121 . + 0 ID=cds-WP_080177080.1;Parent=gene-CCO56_RS21130;Dbxref=GenBank:WP_080177080.1;Name=WP_080177080.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=CCO56_RS21130;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_080177080.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 123129 123905 . + . ID=gene-CCO56_RS21135;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=CCO56_RS21135;old_locus_tag=CCO56_21120 NZ_NPMB01000012.1 Protein Homology CDS 123129 123905 . + 0 ID=cds-WP_023888157.1;Parent=gene-CCO56_RS21135;Dbxref=GenBank:WP_023888157.1;Name=WP_023888157.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=CCO56_RS21135;product=acetylglutamate kinase;protein_id=WP_023888157.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 124023 125399 . + . ID=gene-CCO56_RS21140;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CCO56_RS21140;old_locus_tag=CCO56_21125 NZ_NPMB01000012.1 Protein Homology CDS 124023 125399 . + 0 ID=cds-WP_001230048.1;Parent=gene-CCO56_RS21140;Dbxref=GenBank:WP_001230048.1;Name=WP_001230048.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=CCO56_RS21140;product=argininosuccinate lyase;protein_id=WP_001230048.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 125684 126601 . + . ID=gene-CCO56_RS21150;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=CCO56_RS21150;old_locus_tag=CCO56_21135 NZ_NPMB01000012.1 Protein Homology CDS 125684 126601 . + 0 ID=cds-WP_001025919.1;Parent=gene-CCO56_RS21150;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=CCO56_RS21150;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 126584 127984 . - . ID=gene-CCO56_RS21155;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO56_RS21155;old_locus_tag=CCO56_21140 NZ_NPMB01000012.1 Protein Homology CDS 126584 127984 . - 0 ID=cds-WP_001120791.1;Parent=gene-CCO56_RS21155;Dbxref=GenBank:WP_001120791.1;Name=WP_001120791.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=CCO56_RS21155;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120791.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 128183 128818 . + . ID=gene-CCO56_RS21165;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=CCO56_RS21165;old_locus_tag=CCO56_21150 NZ_NPMB01000012.1 Protein Homology CDS 128183 128818 . + 0 ID=cds-WP_000971958.1;Parent=gene-CCO56_RS21165;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=CCO56_RS21165;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 128834 129193 . + . ID=gene-CCO56_RS21170;Name=CCO56_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21170;old_locus_tag=CCO56_21155 NZ_NPMB01000012.1 Protein Homology CDS 128834 129193 . + 0 ID=cds-WP_000813838.1;Parent=gene-CCO56_RS21170;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=CCO56_RS21170;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 129240 130340 . - . ID=gene-CCO56_RS21175;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=CCO56_RS21175;old_locus_tag=CCO56_21160 NZ_NPMB01000012.1 Protein Homology CDS 129240 130340 . - 0 ID=cds-WP_000186981.1;Parent=gene-CCO56_RS21175;Dbxref=GenBank:WP_000186981.1;Name=WP_000186981.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=CCO56_RS21175;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186981.1;transl_table=11 NZ_NPMB01000012.1 cmsearch riboswitch 130455 130647 . + . ID=id-NZ_NPMB01000012.1:130455..130647;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMB01000012.1 RefSeq gene 130714 132558 . + . ID=gene-CCO56_RS21180;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=CCO56_RS21180;old_locus_tag=CCO56_21165 NZ_NPMB01000012.1 Protein Homology CDS 130714 132558 . + 0 ID=cds-WP_000591403.1;Parent=gene-CCO56_RS21180;Dbxref=GenBank:WP_000591403.1;Name=WP_000591403.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=CCO56_RS21180;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591403.1;transl_table=11 NZ_NPMB01000012.1 RefSeq gene 132503 133354 . + . ID=gene-CCO56_RS21185;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CCO56_RS21185;old_locus_tag=CCO56_21170 NZ_NPMB01000012.1 Protein Homology CDS 132503 133354 . + 0 ID=cds-WP_000201804.1;Parent=gene-CCO56_RS21185;Dbxref=GenBank:WP_000201804.1;Name=WP_000201804.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=CCO56_RS21185;product=glutamate racemase;protein_id=WP_000201804.1;transl_table=11 ##sequence-region NZ_NPMB01000013.1 1 92413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000013.1 RefSeq region 1 92413 . + . ID=NZ_NPMB01000013.1:1..92413;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000013.1 RefSeq gene 157 702 . - . ID=gene-CCO56_RS21190;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=CCO56_RS21190;old_locus_tag=CCO56_21175 NZ_NPMB01000013.1 Protein Homology CDS 157 702 . - 0 ID=cds-WP_000853983.1;Parent=gene-CCO56_RS21190;Dbxref=GenBank:WP_000853983.1;Name=WP_000853983.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=CCO56_RS21190;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853983.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 714 2165 . - . ID=gene-CCO56_RS21195;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=CCO56_RS21195;old_locus_tag=CCO56_21180 NZ_NPMB01000013.1 Protein Homology CDS 714 2165 . - 0 ID=cds-WP_000545688.1;Parent=gene-CCO56_RS21195;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=CCO56_RS21195;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 2204 2818 . - . ID=gene-CCO56_RS21200;Name=CCO56_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21200;old_locus_tag=CCO56_21185 NZ_NPMB01000013.1 Protein Homology CDS 2204 2818 . - 0 ID=cds-WP_000378897.1;Parent=gene-CCO56_RS21200;Dbxref=GenBank:WP_000378897.1;Name=WP_000378897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=CCO56_RS21200;product=IMPACT family protein;protein_id=WP_000378897.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 2818 4149 . - . ID=gene-CCO56_RS21205;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=CCO56_RS21205;old_locus_tag=CCO56_21190 NZ_NPMB01000013.1 Protein Homology CDS 2818 4149 . - 0 ID=cds-WP_058111959.1;Parent=gene-CCO56_RS21205;Dbxref=GenBank:WP_058111959.1;Name=WP_058111959.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=CCO56_RS21205;product=Xaa-Pro dipeptidase;protein_id=WP_058111959.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 4339 6528 . + . ID=gene-CCO56_RS21210;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CCO56_RS21210;old_locus_tag=CCO56_21195 NZ_NPMB01000013.1 Protein Homology CDS 4339 6528 . + 0 ID=cds-WP_080177144.1;Parent=gene-CCO56_RS21210;Dbxref=GenBank:WP_080177144.1;Name=WP_080177144.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=CCO56_RS21210;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_080177144.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 6538 7701 . + . ID=gene-CCO56_RS21215;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=CCO56_RS21215;old_locus_tag=CCO56_21200 NZ_NPMB01000013.1 Protein Homology CDS 6538 7701 . + 0 ID=cds-WP_000438778.1;Parent=gene-CCO56_RS21215;Dbxref=GenBank:WP_000438778.1;Name=WP_000438778.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=CCO56_RS21215;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438778.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 7898 9721 . - . ID=gene-CCO56_RS21220;Name=CCO56_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21220;old_locus_tag=CCO56_21205 NZ_NPMB01000013.1 Protein Homology CDS 7898 9721 . - 0 ID=cds-WP_000669888.1;Parent=gene-CCO56_RS21220;Dbxref=GenBank:WP_000669888.1;Name=WP_000669888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=CCO56_RS21220;product=aryl-sulfate sulfotransferase;protein_id=WP_000669888.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 9975 10676 . - . ID=gene-CCO56_RS21225;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=CCO56_RS21225;old_locus_tag=CCO56_21210 NZ_NPMB01000013.1 Protein Homology CDS 9975 10676 . - 0 ID=cds-WP_000209832.1;Parent=gene-CCO56_RS21225;Dbxref=GenBank:WP_000209832.1;Name=WP_000209832.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=CCO56_RS21225;product=NAD(P)H-flavin reductase;protein_id=WP_000209832.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 10762 12240 . - . ID=gene-CCO56_RS21230;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=CCO56_RS21230;old_locus_tag=CCO56_21215 NZ_NPMB01000013.1 Protein Homology CDS 10762 12240 . - 0 ID=cds-WP_000339760.1;Parent=gene-CCO56_RS21230;Dbxref=GenBank:WP_000339760.1;Name=WP_000339760.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=CCO56_RS21230;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339760.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 12426 12914 . + . ID=gene-CCO56_RS21235;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=CCO56_RS21235;old_locus_tag=CCO56_21220 NZ_NPMB01000013.1 Protein Homology CDS 12426 12914 . + 0 ID=cds-WP_001192410.1;Parent=gene-CCO56_RS21235;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=CCO56_RS21235;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 12922 13704 . - . ID=gene-CCO56_RS21240;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=CCO56_RS21240;old_locus_tag=CCO56_21225 NZ_NPMB01000013.1 Protein Homology CDS 12922 13704 . - 0 ID=cds-WP_000459642.1;Parent=gene-CCO56_RS21240;Dbxref=GenBank:WP_000459642.1;Name=WP_000459642.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=CCO56_RS21240;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459642.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 13746 14525 . - . ID=gene-CCO56_RS21245;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=CCO56_RS21245;old_locus_tag=CCO56_21230 NZ_NPMB01000013.1 Protein Homology CDS 13746 14525 . - 0 ID=cds-WP_000257554.1;Parent=gene-CCO56_RS21245;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=CCO56_RS21245;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 14528 15076 . - . ID=gene-CCO56_RS21250;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=CCO56_RS21250;old_locus_tag=CCO56_21235 NZ_NPMB01000013.1 Protein Homology CDS 14528 15076 . - 0 ID=cds-WP_000459612.1;Parent=gene-CCO56_RS21250;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=CCO56_RS21250;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 15080 15334 . - . ID=gene-CCO56_RS21255;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=CCO56_RS21255;old_locus_tag=CCO56_21240 NZ_NPMB01000013.1 Protein Homology CDS 15080 15334 . - 0 ID=cds-WP_000508972.1;Parent=gene-CCO56_RS21255;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=CCO56_RS21255;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 15540 17180 . - . ID=gene-CCO56_RS21260;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=CCO56_RS21260;old_locus_tag=CCO56_21245 NZ_NPMB01000013.1 Protein Homology CDS 15540 17180 . - 0 ID=cds-WP_000187559.1;Parent=gene-CCO56_RS21260;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=CCO56_RS21260;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 17177 17782 . - . ID=gene-CCO56_RS21265;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=CCO56_RS21265;old_locus_tag=CCO56_21250 NZ_NPMB01000013.1 Protein Homology CDS 17177 17782 . - 0 ID=cds-WP_001116091.1;Parent=gene-CCO56_RS21265;Dbxref=GenBank:WP_001116091.1;Name=WP_001116091.1;Ontology_term=GO:0032150;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process from chorismate|0032150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=CCO56_RS21265;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116091.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 17792 18547 . - . ID=gene-CCO56_RS21270;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=CCO56_RS21270;old_locus_tag=CCO56_21255 NZ_NPMB01000013.1 Protein Homology CDS 17792 18547 . - 0 ID=cds-WP_080177145.1;Parent=gene-CCO56_RS21270;Dbxref=GenBank:WP_080177145.1;Name=WP_080177145.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=CCO56_RS21270;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_080177145.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 18643 20073 . - . ID=gene-CCO56_RS21275;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=CCO56_RS21275;old_locus_tag=CCO56_21260 NZ_NPMB01000013.1 Protein Homology CDS 18643 20073 . - 0 ID=cds-WP_000355562.1;Parent=gene-CCO56_RS21275;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=CCO56_RS21275;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 20213 20974 . - . ID=gene-CCO56_RS21280;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=CCO56_RS21280;old_locus_tag=CCO56_21265 NZ_NPMB01000013.1 Protein Homology CDS 20213 20974 . - 0 ID=cds-WP_000045169.1;Parent=gene-CCO56_RS21280;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=CCO56_RS21280;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 21233 22045 . + . ID=gene-CCO56_RS21285;Name=CCO56_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21285;old_locus_tag=CCO56_21270 NZ_NPMB01000013.1 Protein Homology CDS 21233 22045 . + 0 ID=cds-WP_000213959.1;Parent=gene-CCO56_RS21285;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=CCO56_RS21285;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 22125 23468 . - . ID=gene-CCO56_RS21290;Name=CCO56_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21290;old_locus_tag=CCO56_21275 NZ_NPMB01000013.1 Protein Homology CDS 22125 23468 . - 0 ID=cds-WP_023213954.1;Parent=gene-CCO56_RS21290;Dbxref=GenBank:WP_023213954.1;Name=WP_023213954.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=CCO56_RS21290;product=anaerobic sulfatase maturase;protein_id=WP_023213954.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 23803 26067 . - . ID=gene-CCO56_RS21295;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CCO56_RS21295;old_locus_tag=CCO56_21280 NZ_NPMB01000013.1 Protein Homology CDS 23803 26067 . - 0 ID=cds-WP_000154193.1;Parent=gene-CCO56_RS21295;Dbxref=GenBank:WP_000154193.1;Name=WP_000154193.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=CCO56_RS21295;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154193.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 26316 27269 . + . ID=gene-CCO56_RS21300;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=CCO56_RS21300;old_locus_tag=CCO56_21285 NZ_NPMB01000013.1 Protein Homology CDS 26316 27269 . + 0 ID=cds-WP_001645851.1;Parent=gene-CCO56_RS21300;Dbxref=GenBank:WP_001645851.1;Name=WP_001645851.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=CCO56_RS21300;product=HTH-type transcriptional regulator MetR;protein_id=WP_001645851.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 27157 28056 . - . ID=gene-CCO56_RS21305;Name=CCO56_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21305;old_locus_tag=CCO56_21290 NZ_NPMB01000013.1 Protein Homology CDS 27157 28056 . - 0 ID=cds-WP_001196254.1;Parent=gene-CCO56_RS21305;Dbxref=GenBank:WP_001196254.1;Name=WP_001196254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=CCO56_RS21305;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196254.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 28137 28937 . - . ID=gene-CCO56_RS21310;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=CCO56_RS21310;old_locus_tag=CCO56_21295 NZ_NPMB01000013.1 Protein Homology CDS 28137 28937 . - 0 ID=cds-WP_023233069.1;Parent=gene-CCO56_RS21310;Dbxref=GenBank:WP_023233069.1;Name=WP_023233069.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=CCO56_RS21310;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_023233069.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 28953 29969 . - . ID=gene-CCO56_RS21315;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=CCO56_RS21315;old_locus_tag=CCO56_21300 NZ_NPMB01000013.1 Protein Homology CDS 28953 29969 . - 0 ID=cds-WP_000487685.1;Parent=gene-CCO56_RS21315;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=CCO56_RS21315;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 30080 30700 . + . ID=gene-CCO56_RS21320;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=CCO56_RS21320;old_locus_tag=CCO56_21305 NZ_NPMB01000013.1 Protein Homology CDS 30080 30700 . + 0 ID=cds-WP_080177146.1;Parent=gene-CCO56_RS21320;Dbxref=GenBank:WP_080177146.1;Name=WP_080177146.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=CCO56_RS21320;product=homoserine/homoserine lactone efflux protein;protein_id=WP_080177146.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 30740 31360 . - . ID=gene-CCO56_RS21325;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=CCO56_RS21325;old_locus_tag=CCO56_21310 NZ_NPMB01000013.1 Protein Homology CDS 30740 31360 . - 0 ID=cds-WP_001634972.1;Parent=gene-CCO56_RS21325;Dbxref=GenBank:WP_001634972.1;Name=WP_001634972.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=CCO56_RS21325;product=threonine export protein RhtC;protein_id=WP_001634972.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 31424 33253 . - . ID=gene-CCO56_RS21330;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CCO56_RS21330;old_locus_tag=CCO56_21315 NZ_NPMB01000013.1 Protein Homology CDS 31424 33253 . - 0 ID=cds-WP_094882072.1;Parent=gene-CCO56_RS21330;Dbxref=GenBank:WP_094882072.1;Name=WP_094882072.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=CCO56_RS21330;product=ATP-dependent DNA helicase RecQ;protein_id=WP_094882072.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 33337 34206 . - . ID=gene-CCO56_RS21335;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=CCO56_RS21335;old_locus_tag=CCO56_21320 NZ_NPMB01000013.1 Protein Homology CDS 33337 34206 . - 0 ID=cds-WP_001201692.1;Parent=gene-CCO56_RS21335;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=CCO56_RS21335;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 34371 34838 . + . ID=gene-CCO56_RS21340;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=CCO56_RS21340;old_locus_tag=CCO56_21325 NZ_NPMB01000013.1 Protein Homology CDS 34371 34838 . + 0 ID=cds-WP_001277136.1;Parent=gene-CCO56_RS21340;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=CCO56_RS21340;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 34882 35778 . + . ID=gene-CCO56_RS21345;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO56_RS21345;old_locus_tag=CCO56_21330 NZ_NPMB01000013.1 Protein Homology CDS 34882 35778 . + 0 ID=cds-WP_000339079.1;Parent=gene-CCO56_RS21345;Dbxref=GenBank:WP_000339079.1;Name=WP_000339079.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339083.1;locus_tag=CCO56_RS21345;product=EamA family transporter RarD;protein_id=WP_000339079.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 35852 36802 . - . ID=gene-CCO56_RS21350;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CCO56_RS21350;old_locus_tag=CCO56_21335 NZ_NPMB01000013.1 Protein Homology CDS 35852 36802 . - 0 ID=cds-WP_000947139.1;Parent=gene-CCO56_RS21350;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=CCO56_RS21350;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 36958 37014 . - . ID=gene-CCO56_RS23900;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=CCO56_RS23900 NZ_NPMB01000013.1 Protein Homology CDS 36958 37014 . - 0 ID=cds-WP_213083418.1;Parent=gene-CCO56_RS23900;Dbxref=GenBank:WP_213083418.1;Name=WP_213083418.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=CCO56_RS23900;product=YsgD/CorL family protein;protein_id=WP_213083418.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 37274 39436 . - . ID=gene-CCO56_RS21360;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=CCO56_RS21360;old_locus_tag=CCO56_21345 NZ_NPMB01000013.1 Protein Homology CDS 37274 39436 . - 0 ID=cds-WP_000383436.1;Parent=gene-CCO56_RS21360;Dbxref=GenBank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=CCO56_RS21360;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 39572 40288 . - . ID=gene-CCO56_RS21365;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=CCO56_RS21365;old_locus_tag=CCO56_21350 NZ_NPMB01000013.1 Protein Homology CDS 39572 40288 . - 0 ID=cds-WP_001213560.1;Parent=gene-CCO56_RS21365;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=CCO56_RS21365;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 40288 41190 . - . ID=gene-CCO56_RS21370;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CCO56_RS21370;old_locus_tag=CCO56_21355 NZ_NPMB01000013.1 Protein Homology CDS 40288 41190 . - 0 ID=cds-WP_000132877.1;Parent=gene-CCO56_RS21370;Dbxref=GenBank:WP_000132877.1;Name=WP_000132877.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=CCO56_RS21370;product=tyrosine recombinase XerC;protein_id=WP_000132877.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 41187 41894 . - . ID=gene-CCO56_RS21375;Name=CCO56_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21375;old_locus_tag=CCO56_21360 NZ_NPMB01000013.1 Protein Homology CDS 41187 41894 . - 0 ID=cds-WP_000812760.1;Parent=gene-CCO56_RS21375;Dbxref=GenBank:WP_000812760.1;Name=WP_000812760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=CCO56_RS21375;product=DUF484 domain-containing protein;protein_id=WP_000812760.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 41891 42715 . - . ID=gene-CCO56_RS21380;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=CCO56_RS21380;old_locus_tag=CCO56_21365 NZ_NPMB01000013.1 Protein Homology CDS 41891 42715 . - 0 ID=cds-WP_001160671.1;Parent=gene-CCO56_RS21380;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=CCO56_RS21380;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 42752 42955 . - . ID=gene-CCO56_RS21385;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=CCO56_RS21385;old_locus_tag=CCO56_21370 NZ_NPMB01000013.1 Protein Homology CDS 42752 42955 . - 0 ID=cds-WP_000799903.1;Parent=gene-CCO56_RS21385;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=CCO56_RS21385;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 43141 45153 . + . ID=gene-CCO56_RS21390;Name=CCO56_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21390;old_locus_tag=CCO56_21375 NZ_NPMB01000013.1 Protein Homology CDS 43141 45153 . + 0 ID=cds-WP_001645871.1;Parent=gene-CCO56_RS21390;Dbxref=GenBank:WP_001645871.1;Name=WP_001645871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=CCO56_RS21390;product=hypothetical protein;protein_id=WP_001645871.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 45132 45521 . + . ID=gene-CCO56_RS21395;Name=CCO56_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21395;old_locus_tag=CCO56_21380 NZ_NPMB01000013.1 Protein Homology CDS 45132 45521 . + 0 ID=cds-WP_001124433.1;Parent=gene-CCO56_RS21395;Dbxref=GenBank:WP_001124433.1;Name=WP_001124433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=CCO56_RS21395;product=DUF3021 family protein;protein_id=WP_001124433.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 45591 45911 . + . ID=gene-CCO56_RS21400;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=CCO56_RS21400;old_locus_tag=CCO56_21385 NZ_NPMB01000013.1 Protein Homology CDS 45591 45911 . + 0 ID=cds-WP_000999926.1;Parent=gene-CCO56_RS21400;Dbxref=GenBank:WP_000999926.1;Name=WP_000999926.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=CCO56_RS21400;product=iron donor protein CyaY;protein_id=WP_000999926.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 45989 48535 . - . ID=gene-CCO56_RS21405;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=CCO56_RS21405;old_locus_tag=CCO56_21390 NZ_NPMB01000013.1 Protein Homology CDS 45989 48535 . - 0 ID=cds-WP_000281719.1;Parent=gene-CCO56_RS21405;Dbxref=GenBank:WP_000281719.1;Name=WP_000281719.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=CCO56_RS21405;product=class I adenylate cyclase;protein_id=WP_000281719.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 48912 49853 . + . ID=gene-CCO56_RS21410;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CCO56_RS21410;old_locus_tag=CCO56_21395 NZ_NPMB01000013.1 Protein Homology CDS 48912 49853 . + 0 ID=cds-WP_080177148.1;Parent=gene-CCO56_RS21410;Dbxref=GenBank:WP_080177148.1;Name=WP_080177148.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=CCO56_RS21410;product=hydroxymethylbilane synthase;protein_id=WP_080177148.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 49850 50590 . + . ID=gene-CCO56_RS21415;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=CCO56_RS21415;old_locus_tag=CCO56_21400 NZ_NPMB01000013.1 Protein Homology CDS 49850 50590 . + 0 ID=cds-WP_080177149.1;Parent=gene-CCO56_RS21415;Dbxref=GenBank:WP_080177149.1;Name=WP_080177149.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=CCO56_RS21415;product=uroporphyrinogen-III synthase;protein_id=WP_080177149.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 50612 51781 . + . ID=gene-CCO56_RS21420;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=CCO56_RS21420;old_locus_tag=CCO56_21405 NZ_NPMB01000013.1 Protein Homology CDS 50612 51781 . + 0 ID=cds-WP_000138960.1;Parent=gene-CCO56_RS21420;Dbxref=GenBank:WP_000138960.1;Name=WP_000138960.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=CCO56_RS21420;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138960.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 51784 52980 . + . ID=gene-CCO56_RS21425;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CCO56_RS21425;old_locus_tag=CCO56_21410 NZ_NPMB01000013.1 Protein Homology CDS 51784 52980 . + 0 ID=cds-WP_001546072.1;Parent=gene-CCO56_RS21425;Dbxref=GenBank:WP_001546072.1;Name=WP_001546072.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=CCO56_RS21425;product=protoheme IX biogenesis protein HemY;protein_id=WP_001546072.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 53562 53638 . - . ID=gene-CCO56_RS21430;Name=CCO56_RS21430;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS21430;old_locus_tag=CCO56_21415 NZ_NPMB01000013.1 tRNAscan-SE tRNA 53562 53638 . - . ID=rna-CCO56_RS21430;Parent=gene-CCO56_RS21430;anticodon=(pos:complement(53602..53604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21430;product=tRNA-Pro NZ_NPMB01000013.1 tRNAscan-SE exon 53562 53638 . - . ID=exon-CCO56_RS21430-1;Parent=rna-CCO56_RS21430;anticodon=(pos:complement(53602..53604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21430;product=tRNA-Pro NZ_NPMB01000013.1 RefSeq gene 53681 53767 . - . ID=gene-CCO56_RS21435;Name=CCO56_RS21435;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS21435;old_locus_tag=CCO56_21420 NZ_NPMB01000013.1 tRNAscan-SE tRNA 53681 53767 . - . ID=rna-CCO56_RS21435;Parent=gene-CCO56_RS21435;anticodon=(pos:complement(53731..53733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21435;product=tRNA-Leu NZ_NPMB01000013.1 tRNAscan-SE exon 53681 53767 . - . ID=exon-CCO56_RS21435-1;Parent=rna-CCO56_RS21435;anticodon=(pos:complement(53731..53733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21435;product=tRNA-Leu NZ_NPMB01000013.1 RefSeq gene 53788 53863 . - . ID=gene-CCO56_RS21440;Name=CCO56_RS21440;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS21440;old_locus_tag=CCO56_21425 NZ_NPMB01000013.1 tRNAscan-SE tRNA 53788 53863 . - . ID=rna-CCO56_RS21440;Parent=gene-CCO56_RS21440;anticodon=(pos:complement(53828..53830));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21440;product=tRNA-His NZ_NPMB01000013.1 tRNAscan-SE exon 53788 53863 . - . ID=exon-CCO56_RS21440-1;Parent=rna-CCO56_RS21440;anticodon=(pos:complement(53828..53830));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21440;product=tRNA-His NZ_NPMB01000013.1 RefSeq gene 53918 53994 . - . ID=gene-CCO56_RS21445;Name=CCO56_RS21445;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS21445;old_locus_tag=CCO56_21430 NZ_NPMB01000013.1 tRNAscan-SE tRNA 53918 53994 . - . ID=rna-CCO56_RS21445;Parent=gene-CCO56_RS21445;anticodon=(pos:complement(53958..53960));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21445;product=tRNA-Arg NZ_NPMB01000013.1 tRNAscan-SE exon 53918 53994 . - . ID=exon-CCO56_RS21445-1;Parent=rna-CCO56_RS21445;anticodon=(pos:complement(53958..53960));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21445;product=tRNA-Arg NZ_NPMB01000013.1 RefSeq gene 54097 55482 . - . ID=gene-CCO56_RS21450;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=CCO56_RS21450;old_locus_tag=CCO56_21435 NZ_NPMB01000013.1 Protein Homology CDS 54097 55482 . - 0 ID=cds-WP_000818377.1;Parent=gene-CCO56_RS21450;Dbxref=GenBank:WP_000818377.1;Name=WP_000818377.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=CCO56_RS21450;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818377.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 55689 56429 . - . ID=gene-CCO56_RS21455;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=CCO56_RS21455;old_locus_tag=CCO56_21440 NZ_NPMB01000013.1 Protein Homology CDS 55689 56429 . - 0 ID=cds-WP_000183614.1;Parent=gene-CCO56_RS21455;Dbxref=GenBank:WP_000183614.1;Name=WP_000183614.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=CCO56_RS21455;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183614.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 56426 57784 . - . ID=gene-CCO56_RS21460;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=CCO56_RS21460;old_locus_tag=CCO56_21445 NZ_NPMB01000013.1 Protein Homology CDS 56426 57784 . - 0 ID=cds-WP_000055605.1;Parent=gene-CCO56_RS21460;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=CCO56_RS21460;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 57781 58860 . - . ID=gene-CCO56_RS21465;Name=CCO56_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21465;old_locus_tag=CCO56_21450 NZ_NPMB01000013.1 Protein Homology CDS 57781 58860 . - 0 ID=cds-WP_000217193.1;Parent=gene-CCO56_RS21465;Dbxref=GenBank:WP_000217193.1;Name=WP_000217193.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=CCO56_RS21465;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217193.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 58857 60107 . - . ID=gene-CCO56_RS21470;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=CCO56_RS21470;old_locus_tag=CCO56_21455 NZ_NPMB01000013.1 Protein Homology CDS 58857 60107 . - 0 ID=cds-WP_000050300.1;Parent=gene-CCO56_RS21470;Dbxref=GenBank:WP_000050300.1;Name=WP_000050300.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=CCO56_RS21470;product=lipid III flippase WzxE;protein_id=WP_000050300.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 60109 61239 . - . ID=gene-CCO56_RS21475;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=CCO56_RS21475;old_locus_tag=CCO56_21460 NZ_NPMB01000013.1 Protein Homology CDS 60109 61239 . - 0 ID=cds-WP_000612084.1;Parent=gene-CCO56_RS21475;Dbxref=GenBank:WP_000612084.1;Name=WP_000612084.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=CCO56_RS21475;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612084.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 61244 61921 . - . ID=gene-CCO56_RS21480;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=CCO56_RS21480;old_locus_tag=CCO56_21465 NZ_NPMB01000013.1 Protein Homology CDS 61244 61921 . - 0 ID=cds-WP_162297779.1;Parent=gene-CCO56_RS21480;Dbxref=GenBank:WP_162297779.1;Name=WP_162297779.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=CCO56_RS21480;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_162297779.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 61899 62780 . - . ID=gene-CCO56_RS21485;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CCO56_RS21485;old_locus_tag=CCO56_21470 NZ_NPMB01000013.1 Protein Homology CDS 61899 62780 . - 0 ID=cds-WP_000676077.1;Parent=gene-CCO56_RS21485;Dbxref=GenBank:WP_000676077.1;Name=WP_000676077.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=CCO56_RS21485;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676077.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 62813 63880 . - . ID=gene-CCO56_RS21490;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=CCO56_RS21490;old_locus_tag=CCO56_21475 NZ_NPMB01000013.1 Protein Homology CDS 62813 63880 . - 0 ID=cds-WP_080177151.1;Parent=gene-CCO56_RS21490;Dbxref=GenBank:WP_080177151.1;Name=WP_080177151.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=CCO56_RS21490;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_080177151.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 63880 65142 . - . ID=gene-CCO56_RS21495;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=CCO56_RS21495;old_locus_tag=CCO56_21480 NZ_NPMB01000013.1 Protein Homology CDS 63880 65142 . - 0 ID=cds-WP_000011233.1;Parent=gene-CCO56_RS21495;Dbxref=GenBank:WP_000011233.1;Name=WP_000011233.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=CCO56_RS21495;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000011233.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 65139 66269 . - . ID=gene-CCO56_RS21500;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CCO56_RS21500;old_locus_tag=CCO56_21485 NZ_NPMB01000013.1 Protein Homology CDS 65139 66269 . - 0 ID=cds-WP_080177152.1;Parent=gene-CCO56_RS21500;Dbxref=GenBank:WP_080177152.1;Name=WP_080177152.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=CCO56_RS21500;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_080177152.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 66325 67371 . - . ID=gene-CCO56_RS21505;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=CCO56_RS21505;old_locus_tag=CCO56_21490 NZ_NPMB01000013.1 Protein Homology CDS 66325 67371 . - 0 ID=cds-WP_000193413.1;Parent=gene-CCO56_RS21505;Dbxref=GenBank:WP_000193413.1;Name=WP_000193413.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=CCO56_RS21505;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193413.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 67383 68486 . - . ID=gene-CCO56_RS21510;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=CCO56_RS21510;old_locus_tag=CCO56_21495 NZ_NPMB01000013.1 Protein Homology CDS 67383 68486 . - 0 ID=cds-WP_001050948.1;Parent=gene-CCO56_RS21510;Dbxref=GenBank:WP_001050948.1;Name=WP_001050948.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=CCO56_RS21510;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050948.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 68726 69985 . - . ID=gene-CCO56_RS21520;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CCO56_RS21520;old_locus_tag=CCO56_21505 NZ_NPMB01000013.1 Protein Homology CDS 68726 69985 . - 0 ID=cds-WP_001054532.1;Parent=gene-CCO56_RS21520;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=CCO56_RS21520;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 70073 70156 . - . ID=gene-CCO56_RS23905;Name=CCO56_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23905 NZ_NPMB01000013.1 Protein Homology CDS 70073 70156 . - 0 ID=cds-WP_134820045.1;Parent=gene-CCO56_RS23905;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=CCO56_RS23905;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 70404 70733 . - . ID=gene-CCO56_RS21525;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CCO56_RS21525;old_locus_tag=CCO56_21510 NZ_NPMB01000013.1 Protein Homology CDS 70404 70733 . - 0 ID=cds-WP_001280776.1;Parent=gene-CCO56_RS21525;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=CCO56_RS21525;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 70877 72142 . + . ID=gene-CCO56_RS21530;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=CCO56_RS21530;old_locus_tag=CCO56_21515 NZ_NPMB01000013.1 Protein Homology CDS 70877 72142 . + 0 ID=cds-WP_000047525.1;Parent=gene-CCO56_RS21530;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=CCO56_RS21530;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 72261 73742 . + . ID=gene-CCO56_RS21535;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=CCO56_RS21535;old_locus_tag=CCO56_21520 NZ_NPMB01000013.1 Protein Homology CDS 72261 73742 . + 0 ID=cds-WP_001089447.1;Parent=gene-CCO56_RS21535;Dbxref=GenBank:WP_001089447.1;Name=WP_001089447.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=CCO56_RS21535;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089447.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 73782 75806 . - . ID=gene-CCO56_RS21540;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=CCO56_RS21540;old_locus_tag=CCO56_21525 NZ_NPMB01000013.1 Protein Homology CDS 73782 75806 . - 0 ID=cds-WP_001238842.1;Parent=gene-CCO56_RS21540;Dbxref=GenBank:WP_001238842.1;Name=WP_001238842.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=CCO56_RS21540;product=DNA helicase Rep;protein_id=WP_001238842.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 75906 76634 . - . ID=gene-CCO56_RS21545;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=CCO56_RS21545;old_locus_tag=CCO56_21530 NZ_NPMB01000013.1 Protein Homology CDS 75906 76634 . - 0 ID=cds-WP_001543647.1;Parent=gene-CCO56_RS21545;Dbxref=GenBank:WP_001543647.1;Name=WP_001543647.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=CCO56_RS21545;product=nicotinamide riboside transporter PnuC;protein_id=WP_001543647.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 76634 77377 . - . ID=gene-CCO56_RS21550;Name=CCO56_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21550;old_locus_tag=CCO56_21535 NZ_NPMB01000013.1 Protein Homology CDS 76634 77377 . - 0 ID=cds-WP_001182425.1;Parent=gene-CCO56_RS21550;Dbxref=GenBank:WP_001182425.1;Name=WP_001182425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182423.1;locus_tag=CCO56_RS21550;product=nucleoside phosphorylase;protein_id=WP_001182425.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 77406 78107 . - . ID=gene-CCO56_RS21555;Name=CCO56_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21555;old_locus_tag=CCO56_21540 NZ_NPMB01000013.1 Protein Homology CDS 77406 78107 . - 0 ID=cds-WP_001024341.1;Parent=gene-CCO56_RS21555;Dbxref=GenBank:WP_001024341.1;Name=WP_001024341.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=CCO56_RS21555;product=Crp/Fnr family transcriptional regulator;protein_id=WP_001024341.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 78301 78582 . + . ID=gene-CCO56_RS21560;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=CCO56_RS21560;old_locus_tag=CCO56_21545 NZ_NPMB01000013.1 Protein Homology CDS 78301 78582 . + 0 ID=cds-WP_001096806.1;Parent=gene-CCO56_RS21560;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=CCO56_RS21560;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 78674 80149 . - . ID=gene-CCO56_RS21565;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CCO56_RS21565;old_locus_tag=CCO56_21550 NZ_NPMB01000013.1 Protein Homology CDS 78674 80149 . - 0 ID=cds-WP_000024943.1;Parent=gene-CCO56_RS21565;Dbxref=GenBank:WP_000024943.1;Name=WP_000024943.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=CCO56_RS21565;product=ketol-acid reductoisomerase;protein_id=WP_000024943.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 80314 81201 . + . ID=gene-CCO56_RS21570;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=CCO56_RS21570;old_locus_tag=CCO56_21555 NZ_NPMB01000013.1 Protein Homology CDS 80314 81201 . + 0 ID=cds-WP_000365798.1;Parent=gene-CCO56_RS21570;Dbxref=GenBank:WP_000365798.1;Name=WP_000365798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=CCO56_RS21570;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11 NZ_NPMB01000013.1 RefSeq pseudogene 81204 81545 . - . ID=gene-CCO56_RS21575;Name=CCO56_RS21575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS21575;old_locus_tag=CCO56_21560;pseudo=true NZ_NPMB01000013.1 Protein Homology CDS 81204 81545 . - 0 ID=cds-CCO56_RS21575;Parent=gene-CCO56_RS21575;Note=internal stop;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=CCO56_RS21575;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 81542 81859 . - . ID=gene-CCO56_RS21580;Name=CCO56_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21580;old_locus_tag=CCO56_21565 NZ_NPMB01000013.1 Protein Homology CDS 81542 81859 . - 0 ID=cds-WP_000535852.1;Parent=gene-CCO56_RS21580;Dbxref=GenBank:WP_000535852.1;Name=WP_000535852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=CCO56_RS21580;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000535852.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 82142 83686 . - . ID=gene-CCO56_RS21585;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CCO56_RS21585;old_locus_tag=CCO56_21570 NZ_NPMB01000013.1 Protein Homology CDS 82142 83686 . - 0 ID=cds-WP_001518457.1;Parent=gene-CCO56_RS21585;Dbxref=GenBank:WP_001518457.1;Name=WP_001518457.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=CCO56_RS21585;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001518457.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 83689 85539 . - . ID=gene-CCO56_RS21590;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO56_RS21590;old_locus_tag=CCO56_21575 NZ_NPMB01000013.1 Protein Homology CDS 83689 85539 . - 0 ID=cds-WP_023262817.1;Parent=gene-CCO56_RS21590;Dbxref=GenBank:WP_023262817.1;Name=WP_023262817.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=CCO56_RS21590;product=dihydroxy-acid dehydratase;protein_id=WP_023262817.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 85699 86628 . - . ID=gene-CCO56_RS21595;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=CCO56_RS21595;old_locus_tag=CCO56_21580 NZ_NPMB01000013.1 Protein Homology CDS 85699 86628 . - 0 ID=cds-WP_000208532.1;Parent=gene-CCO56_RS21595;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=CCO56_RS21595;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 86646 86909 . - . ID=gene-CCO56_RS21600;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=CCO56_RS21600;old_locus_tag=CCO56_21585 NZ_NPMB01000013.1 Protein Homology CDS 86646 86909 . - 0 ID=cds-WP_000983260.1;Parent=gene-CCO56_RS21600;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=CCO56_RS21600;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 86906 88552 . - . ID=gene-CCO56_RS21605;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=CCO56_RS21605;old_locus_tag=CCO56_21590 NZ_NPMB01000013.1 Protein Homology CDS 86906 88552 . - 0 ID=cds-WP_023212405.1;Parent=gene-CCO56_RS21605;Dbxref=GenBank:WP_023212405.1;Name=WP_023212405.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=CCO56_RS21605;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_023212405.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 88555 88605 . - . ID=gene-CCO56_RS23595;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=CCO56_RS23595 NZ_NPMB01000013.1 Protein Homology CDS 88555 88605 . - 0 ID=cds-WP_192930503.1;Parent=gene-CCO56_RS23595;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=CCO56_RS23595;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 88692 88790 . - . ID=gene-CCO56_RS21610;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=CCO56_RS21610;old_locus_tag=CCO56_21595 NZ_NPMB01000013.1 Protein Homology CDS 88692 88790 . - 0 ID=cds-WP_001311244.1;Parent=gene-CCO56_RS21610;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=CCO56_RS21610;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 89142 90662 . + . ID=gene-CCO56_RS21615;Name=CCO56_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21615;old_locus_tag=CCO56_21600 NZ_NPMB01000013.1 Protein Homology CDS 89142 90662 . + 0 ID=cds-WP_000050215.1;Parent=gene-CCO56_RS21615;Dbxref=GenBank:WP_000050215.1;Name=WP_000050215.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=CCO56_RS21615;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000050215.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 90687 91025 . - . ID=gene-CCO56_RS21620;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=CCO56_RS21620;old_locus_tag=CCO56_21605 NZ_NPMB01000013.1 Protein Homology CDS 90687 91025 . - 0 ID=cds-WP_000840996.1;Parent=gene-CCO56_RS21620;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=CCO56_RS21620;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 91132 91980 . + . ID=gene-CCO56_RS21625;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=CCO56_RS21625;old_locus_tag=CCO56_21610 NZ_NPMB01000013.1 Protein Homology CDS 91132 91980 . + 0 ID=cds-WP_001541181.1;Parent=gene-CCO56_RS21625;Dbxref=GenBank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=CCO56_RS21625;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11 NZ_NPMB01000013.1 RefSeq gene 92082 92157 . - . ID=gene-CCO56_RS21630;Name=CCO56_RS21630;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS21630;old_locus_tag=CCO56_21615 NZ_NPMB01000013.1 tRNAscan-SE tRNA 92082 92157 . - . ID=rna-CCO56_RS21630;Parent=gene-CCO56_RS21630;anticodon=(pos:complement(92122..92124));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21630;product=tRNA-Trp NZ_NPMB01000013.1 tRNAscan-SE exon 92082 92157 . - . ID=exon-CCO56_RS21630-1;Parent=rna-CCO56_RS21630;anticodon=(pos:complement(92122..92124));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21630;product=tRNA-Trp NZ_NPMB01000013.1 RefSeq gene 92166 92242 . - . ID=gene-CCO56_RS21635;Name=CCO56_RS21635;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS21635;old_locus_tag=CCO56_21620 NZ_NPMB01000013.1 tRNAscan-SE tRNA 92166 92242 . - . ID=rna-CCO56_RS21635;Parent=gene-CCO56_RS21635;anticodon=(pos:complement(92206..92208));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21635;product=tRNA-Asp NZ_NPMB01000013.1 tRNAscan-SE exon 92166 92242 . - . ID=exon-CCO56_RS21635-1;Parent=rna-CCO56_RS21635;anticodon=(pos:complement(92206..92208));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS21635;product=tRNA-Asp NZ_NPMB01000013.1 RefSeq gene 92296 92411 . - . ID=gene-CCO56_RS21640;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO56_RS21640;old_locus_tag=CCO56_21625 NZ_NPMB01000013.1 cmsearch rRNA 92296 92411 . - . ID=rna-CCO56_RS21640;Parent=gene-CCO56_RS21640;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS21640;product=5S ribosomal RNA NZ_NPMB01000013.1 cmsearch exon 92296 92411 . - . ID=exon-CCO56_RS21640-1;Parent=rna-CCO56_RS21640;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS21640;product=5S ribosomal RNA ##sequence-region NZ_NPMB01000014.1 1 73509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000014.1 RefSeq region 1 73509 . + . ID=NZ_NPMB01000014.1:1..73509;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000014.1 RefSeq gene 1 127 . - . ID=gene-CCO56_RS21645;Name=CCO56_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21645;old_locus_tag=CCO56_21630;partial=true;start_range=.,1 NZ_NPMB01000014.1 Protein Homology CDS 1 127 . - 0 ID=cds-WP_116799501.1;Parent=gene-CCO56_RS21645;Dbxref=GenBank:WP_116799501.1;Name=WP_116799501.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO56_RS21645;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_116799501.1;start_range=.,1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 133 1533 . - . ID=gene-CCO56_RS21650;Name=CCO56_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21650;old_locus_tag=CCO56_21635 NZ_NPMB01000014.1 Protein Homology CDS 133 1533 . - 0 ID=cds-WP_000724469.1;Parent=gene-CCO56_RS21650;Dbxref=GenBank:WP_000724469.1;Name=WP_000724469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=CCO56_RS21650;product=cytochrome-c peroxidase;protein_id=WP_000724469.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 1723 2355 . - . ID=gene-CCO56_RS21655;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=CCO56_RS21655;old_locus_tag=CCO56_21640 NZ_NPMB01000014.1 Protein Homology CDS 1723 2355 . - 0 ID=cds-WP_080177100.1;Parent=gene-CCO56_RS21655;Dbxref=GenBank:WP_080177100.1;Name=WP_080177100.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=CCO56_RS21655;product=molecular chaperone TorD;protein_id=WP_080177100.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 2348 4900 . - . ID=gene-CCO56_RS21660;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=CCO56_RS21660;old_locus_tag=CCO56_21645 NZ_NPMB01000014.1 Protein Homology CDS 2348 4900 . - 0 ID=cds-WP_080177101.1;Parent=gene-CCO56_RS21660;Dbxref=GenBank:WP_080177101.1;Name=WP_080177101.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528294.1;locus_tag=CCO56_RS21660;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_080177101.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 4890 6074 . - . ID=gene-CCO56_RS21665;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=CCO56_RS21665;old_locus_tag=CCO56_21650 NZ_NPMB01000014.1 Protein Homology CDS 4890 6074 . - 0 ID=cds-WP_001230254.1;Parent=gene-CCO56_RS21665;Dbxref=GenBank:WP_001230254.1;Name=WP_001230254.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=CCO56_RS21665;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230254.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 6204 6896 . + . ID=gene-CCO56_RS21670;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=CCO56_RS21670;old_locus_tag=CCO56_21655 NZ_NPMB01000014.1 Protein Homology CDS 6204 6896 . + 0 ID=cds-WP_001562512.1;Parent=gene-CCO56_RS21670;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=CCO56_RS21670;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 6869 7909 . - . ID=gene-CCO56_RS21675;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=CCO56_RS21675;old_locus_tag=CCO56_21660 NZ_NPMB01000014.1 Protein Homology CDS 6869 7909 . - 0 ID=cds-WP_001528201.1;Parent=gene-CCO56_RS21675;Dbxref=GenBank:WP_001528201.1;Name=WP_001528201.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=CCO56_RS21675;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001528201.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 7989 10724 . + . ID=gene-CCO56_RS21680;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=CCO56_RS21680;old_locus_tag=CCO56_21665 NZ_NPMB01000014.1 Protein Homology CDS 7989 10724 . + 0 ID=cds-WP_080177102.1;Parent=gene-CCO56_RS21680;Dbxref=GenBank:WP_080177102.1;Name=WP_080177102.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=CCO56_RS21680;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_080177102.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 10829 11956 . - . ID=gene-CCO56_RS21685;Name=CCO56_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21685;old_locus_tag=CCO56_21670 NZ_NPMB01000014.1 Protein Homology CDS 10829 11956 . - 0 ID=cds-WP_015406218.1;Parent=gene-CCO56_RS21685;Dbxref=GenBank:WP_015406218.1;Name=WP_015406218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762570.1;locus_tag=CCO56_RS21685;product=DUF4056 domain-containing protein;protein_id=WP_015406218.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 11953 13092 . - . ID=gene-CCO56_RS21690;Name=CCO56_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21690;old_locus_tag=CCO56_21675 NZ_NPMB01000014.1 Protein Homology CDS 11953 13092 . - 0 ID=cds-WP_080177103.1;Parent=gene-CCO56_RS21690;Dbxref=GenBank:WP_080177103.1;Name=WP_080177103.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528293.1;locus_tag=CCO56_RS21690;product=BamA/TamA family outer membrane protein;protein_id=WP_080177103.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 13089 14111 . - . ID=gene-CCO56_RS21695;Name=CCO56_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21695;old_locus_tag=CCO56_21680 NZ_NPMB01000014.1 Protein Homology CDS 13089 14111 . - 0 ID=cds-WP_023136819.1;Parent=gene-CCO56_RS21695;Dbxref=GenBank:WP_023136819.1;Name=WP_023136819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528257.1;locus_tag=CCO56_RS21695;product=hypothetical protein;protein_id=WP_023136819.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 14313 15125 . - . ID=gene-CCO56_RS21700;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=CCO56_RS21700;old_locus_tag=CCO56_21685 NZ_NPMB01000014.1 Protein Homology CDS 14313 15125 . - 0 ID=cds-WP_000985571.1;Parent=gene-CCO56_RS21700;Dbxref=GenBank:WP_000985571.1;Name=WP_000985571.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=CCO56_RS21700;product=sugar-phosphatase;protein_id=WP_000985571.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 15565 16257 . + . ID=gene-CCO56_RS21710;Name=CCO56_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21710;old_locus_tag=CCO56_21695 NZ_NPMB01000014.1 Protein Homology CDS 15565 16257 . + 0 ID=cds-WP_001606512.1;Parent=gene-CCO56_RS21710;Dbxref=GenBank:WP_001606512.1;Name=WP_001606512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691472.1;locus_tag=CCO56_RS21710;product=hypothetical protein;protein_id=WP_001606512.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 16608 19022 . - . ID=gene-CCO56_RS21715;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CCO56_RS21715;old_locus_tag=CCO56_21700 NZ_NPMB01000014.1 Protein Homology CDS 16608 19022 . - 0 ID=cds-WP_000072047.1;Parent=gene-CCO56_RS21715;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=CCO56_RS21715;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 19051 20124 . - . ID=gene-CCO56_RS21720;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CCO56_RS21720;old_locus_tag=CCO56_21705 NZ_NPMB01000014.1 Protein Homology CDS 19051 20124 . - 0 ID=cds-WP_000059373.1;Parent=gene-CCO56_RS21720;Dbxref=GenBank:WP_000059373.1;Name=WP_000059373.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=CCO56_RS21720;product=DNA replication/repair protein RecF;protein_id=WP_000059373.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 20322 21422 . - . ID=gene-CCO56_RS21725;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CCO56_RS21725;old_locus_tag=CCO56_21710 NZ_NPMB01000014.1 Protein Homology CDS 20322 21422 . - 0 ID=cds-WP_000673474.1;Parent=gene-CCO56_RS21725;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=CCO56_RS21725;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 21427 22827 . - . ID=gene-CCO56_RS21730;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CCO56_RS21730;old_locus_tag=CCO56_21715 NZ_NPMB01000014.1 Protein Homology CDS 21427 22827 . - 0 ID=cds-WP_000059093.1;Parent=gene-CCO56_RS21730;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=CCO56_RS21730;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 23167 23259 . + . ID=gene-CCO56_RS24205;Name=CCO56_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24205 NZ_NPMB01000014.1 Protein Homology CDS 23167 23259 . + 0 ID=cds-WP_418142141.1;Parent=gene-CCO56_RS24205;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=CCO56_RS24205;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 23488 23628 . + . ID=gene-CCO56_RS21735;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CCO56_RS21735;old_locus_tag=CCO56_21720 NZ_NPMB01000014.1 Protein Homology CDS 23488 23628 . + 0 ID=cds-WP_000831330.1;Parent=gene-CCO56_RS21735;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=CCO56_RS21735;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 23645 24004 . + . ID=gene-CCO56_RS21740;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CCO56_RS21740;old_locus_tag=CCO56_21725 NZ_NPMB01000014.1 Protein Homology CDS 23645 24004 . + 0 ID=cds-WP_000239725.1;Parent=gene-CCO56_RS21740;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=CCO56_RS21740;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 23968 24225 . + . ID=gene-CCO56_RS21745;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CCO56_RS21745;old_locus_tag=CCO56_21730 NZ_NPMB01000014.1 Protein Homology CDS 23968 24225 . + 0 ID=cds-WP_001307474.1;Parent=gene-CCO56_RS21745;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=CCO56_RS21745;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 24228 25874 . + . ID=gene-CCO56_RS21750;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CCO56_RS21750;old_locus_tag=CCO56_21735 NZ_NPMB01000014.1 Protein Homology CDS 24228 25874 . + 0 ID=cds-WP_000378278.1;Parent=gene-CCO56_RS21750;Dbxref=GenBank:WP_000378278.1;Name=WP_000378278.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=CCO56_RS21750;product=membrane protein insertase YidC;protein_id=WP_000378278.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 26016 27380 . + . ID=gene-CCO56_RS21755;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CCO56_RS21755;old_locus_tag=CCO56_21740 NZ_NPMB01000014.1 Protein Homology CDS 26016 27380 . + 0 ID=cds-WP_000019081.1;Parent=gene-CCO56_RS21755;Dbxref=GenBank:WP_000019081.1;Name=WP_000019081.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=CCO56_RS21755;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000019081.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 27563 28750 . + . ID=gene-CCO56_RS21760;Name=CCO56_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21760;old_locus_tag=CCO56_21745 NZ_NPMB01000014.1 Protein Homology CDS 27563 28750 . + 0 ID=cds-WP_001608974.1;Parent=gene-CCO56_RS21760;Dbxref=GenBank:WP_001608974.1;Name=WP_001608974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608974.1;locus_tag=CCO56_RS21760;product=MFS transporter;protein_id=WP_001608974.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 28719 29678 . + . ID=gene-CCO56_RS21765;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=CCO56_RS21765;old_locus_tag=CCO56_21750 NZ_NPMB01000014.1 Protein Homology CDS 28719 29678 . + 0 ID=cds-WP_000749365.1;Parent=gene-CCO56_RS21765;Dbxref=GenBank:WP_000749365.1;Name=WP_000749365.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=CCO56_RS21765;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749365.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 29836 30591 . + . ID=gene-CCO56_RS21770;Name=CCO56_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21770;old_locus_tag=CCO56_21755 NZ_NPMB01000014.1 Protein Homology CDS 29836 30591 . + 0 ID=cds-WP_000190678.1;Parent=gene-CCO56_RS21770;Dbxref=GenBank:WP_000190678.1;Name=WP_000190678.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=CCO56_RS21770;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190678.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 30591 31175 . + . ID=gene-CCO56_RS21775;Name=CCO56_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21775;old_locus_tag=CCO56_21760 NZ_NPMB01000014.1 Protein Homology CDS 30591 31175 . + 0 ID=cds-WP_001608976.1;Parent=gene-CCO56_RS21775;Dbxref=GenBank:WP_001608976.1;Name=WP_001608976.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=CCO56_RS21775;product=NADPH-dependent FMN reductase;protein_id=WP_001608976.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 31220 32557 . - . ID=gene-CCO56_RS21780;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=CCO56_RS21780;old_locus_tag=CCO56_21765 NZ_NPMB01000014.1 Protein Homology CDS 31220 32557 . - 0 ID=cds-WP_001519317.1;Parent=gene-CCO56_RS21780;Dbxref=GenBank:WP_001519317.1;Name=WP_001519317.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=CCO56_RS21780;product=adenine permease AdeP;protein_id=WP_001519317.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 32726 33391 . + . ID=gene-CCO56_RS21785;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=CCO56_RS21785;old_locus_tag=CCO56_21770 NZ_NPMB01000014.1 Protein Homology CDS 32726 33391 . + 0 ID=cds-WP_000078081.1;Parent=gene-CCO56_RS21785;Dbxref=GenBank:WP_000078081.1;Name=WP_000078081.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=CCO56_RS21785;product=6-phosphogluconate phosphatase;protein_id=WP_000078081.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 33486 34211 . - . ID=gene-CCO56_RS21790;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CCO56_RS21790;old_locus_tag=CCO56_21775 NZ_NPMB01000014.1 Protein Homology CDS 33486 34211 . - 0 ID=cds-WP_000377800.1;Parent=gene-CCO56_RS21790;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=CCO56_RS21790;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 34226 34999 . - . ID=gene-CCO56_RS21795;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CCO56_RS21795;old_locus_tag=CCO56_21780 NZ_NPMB01000014.1 Protein Homology CDS 34226 34999 . - 0 ID=cds-WP_000063118.1;Parent=gene-CCO56_RS21795;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=CCO56_RS21795;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 35086 35976 . - . ID=gene-CCO56_RS21800;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CCO56_RS21800;old_locus_tag=CCO56_21785 NZ_NPMB01000014.1 Protein Homology CDS 35086 35976 . - 0 ID=cds-WP_000212197.1;Parent=gene-CCO56_RS21800;Dbxref=GenBank:WP_000212197.1;Name=WP_000212197.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=CCO56_RS21800;product=phosphate ABC transporter permease PstA;protein_id=WP_000212197.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 35976 36935 . - . ID=gene-CCO56_RS21805;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CCO56_RS21805;old_locus_tag=CCO56_21790 NZ_NPMB01000014.1 Protein Homology CDS 35976 36935 . - 0 ID=cds-WP_000741630.1;Parent=gene-CCO56_RS21805;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=CCO56_RS21805;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 37071 38111 . - . ID=gene-CCO56_RS21810;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=CCO56_RS21810;old_locus_tag=CCO56_21795 NZ_NPMB01000014.1 Protein Homology CDS 37071 38111 . - 0 ID=cds-WP_000867131.1;Parent=gene-CCO56_RS21810;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=CCO56_RS21810;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 38277 39650 . - . ID=gene-CCO56_RS21815;Name=CCO56_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21815;old_locus_tag=CCO56_21800 NZ_NPMB01000014.1 Protein Homology CDS 38277 39650 . - 0 ID=cds-WP_000162546.1;Parent=gene-CCO56_RS21815;Dbxref=GenBank:WP_000162546.1;Name=WP_000162546.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=CCO56_RS21815;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_000162546.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 39700 40518 . - . ID=gene-CCO56_RS21820;Name=CCO56_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21820;old_locus_tag=CCO56_21805 NZ_NPMB01000014.1 Protein Homology CDS 39700 40518 . - 0 ID=cds-WP_000166708.1;Parent=gene-CCO56_RS21820;Dbxref=GenBank:WP_000166708.1;Name=WP_000166708.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=CCO56_RS21820;product=shikimate 5-dehydrogenase;protein_id=WP_000166708.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 40613 42370 . + . ID=gene-CCO56_RS21825;Name=CCO56_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21825;old_locus_tag=CCO56_21810 NZ_NPMB01000014.1 Protein Homology CDS 40613 42370 . + 0 ID=cds-WP_000235493.1;Parent=gene-CCO56_RS21825;Dbxref=GenBank:WP_000235493.1;Name=WP_000235493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=CCO56_RS21825;product=SgrR family transcriptional regulator;protein_id=WP_000235493.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 42521 44350 . - . ID=gene-CCO56_RS21830;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CCO56_RS21830;old_locus_tag=CCO56_21815 NZ_NPMB01000014.1 Protein Homology CDS 42521 44350 . - 0 ID=cds-WP_000334064.1;Parent=gene-CCO56_RS21830;Dbxref=GenBank:WP_000334064.1;Name=WP_000334064.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=CCO56_RS21830;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334064.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 44539 45909 . - . ID=gene-CCO56_RS21835;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CCO56_RS21835;old_locus_tag=CCO56_21820 NZ_NPMB01000014.1 Protein Homology CDS 44539 45909 . - 0 ID=cds-WP_000934847.1;Parent=gene-CCO56_RS21835;Dbxref=GenBank:WP_000934847.1;Name=WP_000934847.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=CCO56_RS21835;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934847.1;transl_table=11 NZ_NPMB01000014.1 RefSeq pseudogene 46229 46923 . - . ID=gene-CCO56_RS21845;Name=CCO56_RS21845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS21845;old_locus_tag=CCO56_21830;pseudo=true NZ_NPMB01000014.1 Protein Homology CDS 46229 46923 . - 0 ID=cds-CCO56_RS21845;Parent=gene-CCO56_RS21845;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=CCO56_RS21845;product=Bax inhibitor-1/YccA family protein;pseudo=true;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 47153 47572 . - . ID=gene-CCO56_RS21850;Name=CCO56_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21850;old_locus_tag=CCO56_21835 NZ_NPMB01000014.1 Protein Homology CDS 47153 47572 . - 0 ID=cds-WP_001251971.1;Parent=gene-CCO56_RS21850;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=CCO56_RS21850;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 47593 48975 . - . ID=gene-CCO56_RS21855;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CCO56_RS21855;old_locus_tag=CCO56_21840 NZ_NPMB01000014.1 Protein Homology CDS 47593 48975 . - 0 ID=cds-WP_000190499.1;Parent=gene-CCO56_RS21855;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=CCO56_RS21855;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 49002 49865 . - . ID=gene-CCO56_RS21860;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CCO56_RS21860;old_locus_tag=CCO56_21845 NZ_NPMB01000014.1 Protein Homology CDS 49002 49865 . - 0 ID=cds-WP_000896506.1;Parent=gene-CCO56_RS21860;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=CCO56_RS21860;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 49916 51457 . - . ID=gene-CCO56_RS21865;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CCO56_RS21865;old_locus_tag=CCO56_21850 NZ_NPMB01000014.1 Protein Homology CDS 49916 51457 . - 0 ID=cds-WP_001176751.1;Parent=gene-CCO56_RS21865;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=CCO56_RS21865;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 51470 52003 . - . ID=gene-CCO56_RS21870;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=CCO56_RS21870;old_locus_tag=CCO56_21855 NZ_NPMB01000014.1 Protein Homology CDS 51470 52003 . - 0 ID=cds-WP_001288957.1;Parent=gene-CCO56_RS21870;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=CCO56_RS21870;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 52018 52488 . - . ID=gene-CCO56_RS21875;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=CCO56_RS21875;old_locus_tag=CCO56_21860 NZ_NPMB01000014.1 Protein Homology CDS 52018 52488 . - 0 ID=cds-WP_001052212.1;Parent=gene-CCO56_RS21875;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=CCO56_RS21875;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 52548 52787 . - . ID=gene-CCO56_RS21880;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CCO56_RS21880;old_locus_tag=CCO56_21865 NZ_NPMB01000014.1 Protein Homology CDS 52548 52787 . - 0 ID=cds-WP_000429386.1;Parent=gene-CCO56_RS21880;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=CCO56_RS21880;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 52834 53649 . - . ID=gene-CCO56_RS21885;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CCO56_RS21885;old_locus_tag=CCO56_21870 NZ_NPMB01000014.1 Protein Homology CDS 52834 53649 . - 0 ID=cds-WP_000135632.1;Parent=gene-CCO56_RS21885;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=CCO56_RS21885;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 53658 54038 . - . ID=gene-CCO56_RS21890;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=CCO56_RS21890;old_locus_tag=CCO56_21875 NZ_NPMB01000014.1 Protein Homology CDS 53658 54038 . - 0 ID=cds-WP_000116685.1;Parent=gene-CCO56_RS21890;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=CCO56_RS21890;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 54654 55277 . - . ID=gene-CCO56_RS21895;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CCO56_RS21895;old_locus_tag=CCO56_21880 NZ_NPMB01000014.1 Protein Homology CDS 54654 55277 . - 0 ID=cds-WP_080177109.1;Parent=gene-CCO56_RS21895;Dbxref=GenBank:WP_080177109.1;Name=WP_080177109.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=CCO56_RS21895;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_080177109.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 55380 57269 . - . ID=gene-CCO56_RS21900;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CCO56_RS21900;old_locus_tag=CCO56_21885 NZ_NPMB01000014.1 Protein Homology CDS 55380 57269 . - 0 ID=cds-WP_000499872.1;Parent=gene-CCO56_RS21900;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=CCO56_RS21900;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 57648 58091 . - . ID=gene-CCO56_RS21905;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=CCO56_RS21905;old_locus_tag=CCO56_21890 NZ_NPMB01000014.1 Protein Homology CDS 57648 58091 . - 0 ID=cds-WP_079982184.1;Parent=gene-CCO56_RS21905;Dbxref=GenBank:WP_079982184.1;Name=WP_079982184.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=CCO56_RS21905;product=FMN-binding protein MioC;protein_id=WP_079982184.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 58181 58639 . - . ID=gene-CCO56_RS21910;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=CCO56_RS21910;old_locus_tag=CCO56_21895 NZ_NPMB01000014.1 Protein Homology CDS 58181 58639 . - 0 ID=cds-WP_000433016.1;Parent=gene-CCO56_RS21910;Dbxref=GenBank:WP_000433016.1;Name=WP_000433016.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=CCO56_RS21910;product=transcriptional regulator AsnC;protein_id=WP_000433016.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 58790 59782 . + . ID=gene-CCO56_RS21915;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=CCO56_RS21915;old_locus_tag=CCO56_21900 NZ_NPMB01000014.1 Protein Homology CDS 58790 59782 . + 0 ID=cds-WP_000845120.1;Parent=gene-CCO56_RS21915;Dbxref=GenBank:WP_000845120.1;Name=WP_000845120.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=CCO56_RS21915;product=aspartate--ammonia ligase;protein_id=WP_000845120.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 59787 61238 . - . ID=gene-CCO56_RS21920;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=CCO56_RS21920;old_locus_tag=CCO56_21905 NZ_NPMB01000014.1 Protein Homology CDS 59787 61238 . - 0 ID=cds-WP_000956584.1;Parent=gene-CCO56_RS21920;Dbxref=GenBank:WP_000956584.1;Name=WP_000956584.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=CCO56_RS21920;product=ATPase RavA stimulator ViaA;protein_id=WP_000956584.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 61232 62728 . - . ID=gene-CCO56_RS21925;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=CCO56_RS21925;old_locus_tag=CCO56_21910 NZ_NPMB01000014.1 Protein Homology CDS 61232 62728 . - 0 ID=cds-WP_000940987.1;Parent=gene-CCO56_RS21925;Dbxref=GenBank:WP_000940987.1;Name=WP_000940987.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=CCO56_RS21925;product=ATPase RavA;protein_id=WP_000940987.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 63077 64945 . + . ID=gene-CCO56_RS21930;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=CCO56_RS21930;old_locus_tag=CCO56_21915 NZ_NPMB01000014.1 Protein Homology CDS 63077 64945 . + 0 ID=cds-WP_000102338.1;Parent=gene-CCO56_RS21930;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=CCO56_RS21930;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 65162 65581 . + . ID=gene-CCO56_RS21935;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CCO56_RS21935;old_locus_tag=CCO56_21920 NZ_NPMB01000014.1 Protein Homology CDS 65162 65581 . + 0 ID=cds-WP_000715944.1;Parent=gene-CCO56_RS21935;Dbxref=GenBank:WP_000715944.1;Name=WP_000715944.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=CCO56_RS21935;product=D-ribose pyranase;protein_id=WP_000715944.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 65589 67094 . + . ID=gene-CCO56_RS21940;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=CCO56_RS21940;old_locus_tag=CCO56_21925 NZ_NPMB01000014.1 Protein Homology CDS 65589 67094 . + 0 ID=cds-WP_000339366.1;Parent=gene-CCO56_RS21940;Dbxref=GenBank:WP_000339366.1;Name=WP_000339366.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=CCO56_RS21940;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339366.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 67100 68065 . + . ID=gene-CCO56_RS21945;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=CCO56_RS21945;old_locus_tag=CCO56_21930 NZ_NPMB01000014.1 Protein Homology CDS 67100 68065 . + 0 ID=cds-WP_000211345.1;Parent=gene-CCO56_RS21945;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=CCO56_RS21945;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 68090 68980 . + . ID=gene-CCO56_RS21950;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=CCO56_RS21950;old_locus_tag=CCO56_21935 NZ_NPMB01000014.1 Protein Homology CDS 68090 68980 . + 0 ID=cds-WP_001056260.1;Parent=gene-CCO56_RS21950;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=CCO56_RS21950;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 69113 70042 . + . ID=gene-CCO56_RS21955;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO56_RS21955;old_locus_tag=CCO56_21940 NZ_NPMB01000014.1 Protein Homology CDS 69113 70042 . + 0 ID=cds-WP_080177107.1;Parent=gene-CCO56_RS21955;Dbxref=GenBank:WP_080177107.1;Name=WP_080177107.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=CCO56_RS21955;product=ribokinase;protein_id=WP_080177107.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 70046 71044 . + . ID=gene-CCO56_RS21960;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=CCO56_RS21960;old_locus_tag=CCO56_21945 NZ_NPMB01000014.1 Protein Homology CDS 70046 71044 . + 0 ID=cds-WP_000224487.1;Parent=gene-CCO56_RS21960;Dbxref=GenBank:WP_000224487.1;Name=WP_000224487.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=CCO56_RS21960;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224487.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 71010 72437 . - . ID=gene-CCO56_RS21965;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=CCO56_RS21965;old_locus_tag=CCO56_21950 NZ_NPMB01000014.1 Protein Homology CDS 71010 72437 . - 0 ID=cds-WP_000202071.1;Parent=gene-CCO56_RS21965;Dbxref=GenBank:WP_000202071.1;Name=WP_000202071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=CCO56_RS21965;product=multidrug transporter subunit MdtD;protein_id=WP_000202071.1;transl_table=11 NZ_NPMB01000014.1 RefSeq gene 72449 73153 . - . ID=gene-CCO56_RS21970;Name=CCO56_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21970;old_locus_tag=CCO56_21955 NZ_NPMB01000014.1 Protein Homology CDS 72449 73153 . - 0 ID=cds-WP_001528246.1;Parent=gene-CCO56_RS21970;Dbxref=GenBank:WP_001528246.1;Name=WP_001528246.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=CCO56_RS21970;product=FadR/GntR family transcriptional regulator;protein_id=WP_001528246.1;transl_table=11 ##sequence-region NZ_NPMB01000015.1 1 68666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000015.1 RefSeq region 1 68666 . + . ID=NZ_NPMB01000015.1:1..68666;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000015.1 RefSeq pseudogene 1 164 . - . ID=gene-CCO56_RS24020;Name=CCO56_RS24020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24020;old_locus_tag=CCO56_21960;partial=true;pseudo=true;start_range=.,1 NZ_NPMB01000015.1 Protein Homology CDS 1 164 . - 0 ID=cds-CCO56_RS24020;Parent=gene-CCO56_RS24020;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001143729.1;locus_tag=CCO56_RS24020;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 195 761 . + . ID=gene-CCO56_RS21980;Name=CCO56_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21980;old_locus_tag=CCO56_21965 NZ_NPMB01000015.1 Protein Homology CDS 195 761 . + 0 ID=cds-WP_001555853.1;Parent=gene-CCO56_RS21980;Dbxref=GenBank:WP_001555853.1;Name=WP_001555853.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529756.1;locus_tag=CCO56_RS21980;product=recombinase family protein;protein_id=WP_001555853.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 904 2076 . + . ID=gene-CCO56_RS21985;Name=CCO56_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21985;old_locus_tag=CCO56_21970 NZ_NPMB01000015.1 Protein Homology CDS 904 2076 . + 0 ID=cds-WP_040091140.1;Parent=gene-CCO56_RS21985;Dbxref=GenBank:WP_040091140.1;Name=WP_040091140.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226043.1;locus_tag=CCO56_RS21985;product=phage tail sheath protein;protein_id=WP_040091140.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 2086 2601 . + . ID=gene-CCO56_RS21990;Name=CCO56_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21990;old_locus_tag=CCO56_21975 NZ_NPMB01000015.1 Protein Homology CDS 2086 2601 . + 0 ID=cds-WP_001207660.1;Parent=gene-CCO56_RS21990;Dbxref=GenBank:WP_001207660.1;Name=WP_001207660.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=CCO56_RS21990;product=phage major tail tube protein;protein_id=WP_001207660.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 2656 2958 . + . ID=gene-CCO56_RS21995;Name=CCO56_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS21995;old_locus_tag=CCO56_21980 NZ_NPMB01000015.1 Protein Homology CDS 2656 2958 . + 0 ID=cds-WP_001281016.1;Parent=gene-CCO56_RS21995;Dbxref=GenBank:WP_001281016.1;Name=WP_001281016.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=CCO56_RS21995;product=phage tail assembly protein;protein_id=WP_001281016.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 2973 3092 . + . ID=gene-CCO56_RS22000;Name=CCO56_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22000;old_locus_tag=CCO56_21985 NZ_NPMB01000015.1 Protein Homology CDS 2973 3092 . + 0 ID=cds-WP_000763311.1;Parent=gene-CCO56_RS22000;Dbxref=GenBank:WP_000763311.1;Name=WP_000763311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=CCO56_RS22000;product=GpE family phage tail protein;protein_id=WP_000763311.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 3085 6162 . + . ID=gene-CCO56_RS22005;Name=CCO56_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22005;old_locus_tag=CCO56_21990 NZ_NPMB01000015.1 Protein Homology CDS 3085 6162 . + 0 ID=cds-WP_080177009.1;Parent=gene-CCO56_RS22005;Dbxref=GenBank:WP_080177009.1;Name=WP_080177009.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282780.1;locus_tag=CCO56_RS22005;product=phage tail tape measure protein;protein_id=WP_080177009.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 6159 6644 . + . ID=gene-CCO56_RS22010;Name=CCO56_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22010;old_locus_tag=CCO56_21995 NZ_NPMB01000015.1 Protein Homology CDS 6159 6644 . + 0 ID=cds-WP_080177010.1;Parent=gene-CCO56_RS22010;Dbxref=GenBank:WP_080177010.1;Name=WP_080177010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226049.1;locus_tag=CCO56_RS22010;product=phage tail protein;protein_id=WP_080177010.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 6641 7741 . + . ID=gene-CCO56_RS22015;Name=CCO56_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22015;old_locus_tag=CCO56_22000 NZ_NPMB01000015.1 Protein Homology CDS 6641 7741 . + 0 ID=cds-WP_080177011.1;Parent=gene-CCO56_RS22015;Dbxref=GenBank:WP_080177011.1;Name=WP_080177011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226050.1;locus_tag=CCO56_RS22015;product=phage late control D family protein;protein_id=WP_080177011.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 7832 8050 . + . ID=gene-CCO56_RS22020;Name=CCO56_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22020;old_locus_tag=CCO56_22005 NZ_NPMB01000015.1 Protein Homology CDS 7832 8050 . + 0 ID=cds-WP_000972391.1;Parent=gene-CCO56_RS22020;Dbxref=GenBank:WP_000972391.1;Name=WP_000972391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001504085.1;locus_tag=CCO56_RS22020;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000972391.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 8286 9971 . - . ID=gene-CCO56_RS22025;Name=CCO56_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22025;old_locus_tag=CCO56_22010 NZ_NPMB01000015.1 Protein Homology CDS 8286 9971 . - 0 ID=cds-WP_001024852.1;Parent=gene-CCO56_RS22025;Dbxref=GenBank:WP_001024852.1;Name=WP_001024852.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=CCO56_RS22025;product=aspartate:alanine antiporter;protein_id=WP_001024852.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 10242 10619 . + . ID=gene-CCO56_RS22030;Name=CCO56_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22030;old_locus_tag=CCO56_22015 NZ_NPMB01000015.1 Protein Homology CDS 10242 10619 . + 0 ID=cds-WP_000680850.1;Parent=gene-CCO56_RS22030;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=CCO56_RS22030;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 10651 10914 . - . ID=gene-CCO56_RS22035;Name=CCO56_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22035;old_locus_tag=CCO56_22020 NZ_NPMB01000015.1 Protein Homology CDS 10651 10914 . - 0 ID=cds-WP_000495513.1;Parent=gene-CCO56_RS22035;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=CCO56_RS22035;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 11084 11374 . + . ID=gene-CCO56_RS22040;Name=CCO56_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22040;old_locus_tag=CCO56_22025 NZ_NPMB01000015.1 Protein Homology CDS 11084 11374 . + 0 ID=cds-WP_001259137.1;Parent=gene-CCO56_RS22040;Dbxref=GenBank:WP_001259137.1;Name=WP_001259137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=CCO56_RS22040;product=YbjC family protein;protein_id=WP_001259137.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 11358 12080 . + . ID=gene-CCO56_RS22045;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CCO56_RS22045;old_locus_tag=CCO56_22030 NZ_NPMB01000015.1 Protein Homology CDS 11358 12080 . + 0 ID=cds-WP_000075300.1;Parent=gene-CCO56_RS22045;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=CCO56_RS22045;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 12138 13040 . + . ID=gene-CCO56_RS22050;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=CCO56_RS22050;old_locus_tag=CCO56_22035 NZ_NPMB01000015.1 Protein Homology CDS 12138 13040 . + 0 ID=cds-WP_000684366.1;Parent=gene-CCO56_RS22050;Dbxref=GenBank:WP_000684366.1;Name=WP_000684366.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=CCO56_RS22050;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684366.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 13136 13612 . + . ID=gene-CCO56_RS22055;Name=CCO56_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22055;old_locus_tag=CCO56_22040 NZ_NPMB01000015.1 Protein Homology CDS 13136 13612 . + 0 ID=cds-WP_000624810.1;Parent=gene-CCO56_RS22055;Dbxref=GenBank:WP_000624810.1;Name=WP_000624810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=CCO56_RS22055;product=YbjN domain-containing protein;protein_id=WP_000624810.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 13961 15073 . + . ID=gene-CCO56_RS22060;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=CCO56_RS22060;old_locus_tag=CCO56_22045 NZ_NPMB01000015.1 Protein Homology CDS 13961 15073 . + 0 ID=cds-WP_000125769.1;Parent=gene-CCO56_RS22060;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=CCO56_RS22060;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 15161 16294 . + . ID=gene-CCO56_RS22065;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=CCO56_RS22065;old_locus_tag=CCO56_22050 NZ_NPMB01000015.1 Protein Homology CDS 15161 16294 . + 0 ID=cds-WP_001000698.1;Parent=gene-CCO56_RS22065;Dbxref=GenBank:WP_001000698.1;Name=WP_001000698.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=CCO56_RS22065;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000698.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 16304 17257 . + . ID=gene-CCO56_RS22070;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=CCO56_RS22070;old_locus_tag=CCO56_22055 NZ_NPMB01000015.1 Protein Homology CDS 16304 17257 . + 0 ID=cds-WP_000105453.1;Parent=gene-CCO56_RS22070;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=CCO56_RS22070;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 17254 18099 . + . ID=gene-CCO56_RS22075;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=CCO56_RS22075;old_locus_tag=CCO56_22060 NZ_NPMB01000015.1 Protein Homology CDS 17254 18099 . + 0 ID=cds-WP_001061629.1;Parent=gene-CCO56_RS22075;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=CCO56_RS22075;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 18173 18646 . + . ID=gene-CCO56_RS22080;Name=CCO56_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22080;old_locus_tag=CCO56_22065 NZ_NPMB01000015.1 Protein Homology CDS 18173 18646 . + 0 ID=cds-WP_069722040.1;Parent=gene-CCO56_RS22080;Dbxref=GenBank:WP_069722040.1;Name=WP_069722040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=CCO56_RS22080;product=YbjO family protein;protein_id=WP_069722040.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 18689 19816 . + . ID=gene-CCO56_RS22085;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=CCO56_RS22085;old_locus_tag=CCO56_22070 NZ_NPMB01000015.1 Protein Homology CDS 18689 19816 . + 0 ID=cds-WP_001633252.1;Parent=gene-CCO56_RS22085;Dbxref=GenBank:WP_001633252.1;Name=WP_001633252.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=CCO56_RS22085;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001633252.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 20111 21454 . + . ID=gene-CCO56_RS22090;Name=CCO56_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22090;old_locus_tag=CCO56_22075 NZ_NPMB01000015.1 Protein Homology CDS 20111 21454 . + 0 ID=cds-WP_080177012.1;Parent=gene-CCO56_RS22090;Dbxref=GenBank:WP_080177012.1;Name=WP_080177012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=CCO56_RS22090;product=PTS sugar transporter subunit IIC;protein_id=WP_080177012.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 21484 21804 . + . ID=gene-CCO56_RS22095;Name=CCO56_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22095;old_locus_tag=CCO56_22080 NZ_NPMB01000015.1 Protein Homology CDS 21484 21804 . + 0 ID=cds-WP_000655399.1;Parent=gene-CCO56_RS22095;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=CCO56_RS22095;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 21814 23301 . + . ID=gene-CCO56_RS22100;Name=CCO56_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22100;old_locus_tag=CCO56_22085 NZ_NPMB01000015.1 Protein Homology CDS 21814 23301 . + 0 ID=cds-WP_094882073.1;Parent=gene-CCO56_RS22100;Dbxref=GenBank:WP_094882073.1;Name=WP_094882073.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=CCO56_RS22100;product=sulfatase;protein_id=WP_094882073.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 23508 24239 . - . ID=gene-CCO56_RS22110;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=CCO56_RS22110;old_locus_tag=CCO56_22095 NZ_NPMB01000015.1 Protein Homology CDS 23508 24239 . - 0 ID=cds-WP_000737537.1;Parent=gene-CCO56_RS22110;Dbxref=GenBank:WP_000737537.1;Name=WP_000737537.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=CCO56_RS22110;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737537.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 24476 25144 . - . ID=gene-CCO56_RS22115;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=CCO56_RS22115;old_locus_tag=CCO56_22100 NZ_NPMB01000015.1 Protein Homology CDS 24476 25144 . - 0 ID=cds-WP_000895393.1;Parent=gene-CCO56_RS22115;Dbxref=GenBank:WP_000895393.1;Name=WP_000895393.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=CCO56_RS22115;product=arginine ABC transporter permease ArtM;protein_id=WP_000895393.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 25144 25860 . - . ID=gene-CCO56_RS22120;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=CCO56_RS22120;old_locus_tag=CCO56_22105 NZ_NPMB01000015.1 Protein Homology CDS 25144 25860 . - 0 ID=cds-WP_001001677.1;Parent=gene-CCO56_RS22120;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=CCO56_RS22120;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 25867 26598 . - . ID=gene-CCO56_RS22125;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=CCO56_RS22125;old_locus_tag=CCO56_22110 NZ_NPMB01000015.1 Protein Homology CDS 25867 26598 . - 0 ID=cds-WP_000756586.1;Parent=gene-CCO56_RS22125;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=CCO56_RS22125;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 26616 27344 . - . ID=gene-CCO56_RS22130;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=CCO56_RS22130;old_locus_tag=CCO56_22115 NZ_NPMB01000015.1 Protein Homology CDS 26616 27344 . - 0 ID=cds-WP_000027186.1;Parent=gene-CCO56_RS22130;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=CCO56_RS22130;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 27573 28088 . - . ID=gene-CCO56_RS22135;Name=CCO56_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22135;old_locus_tag=CCO56_22120 NZ_NPMB01000015.1 Protein Homology CDS 27573 28088 . - 0 ID=cds-WP_001270724.1;Parent=gene-CCO56_RS22135;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=CCO56_RS22135;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 28216 28539 . + . ID=gene-CCO56_RS22140;Name=CCO56_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22140;old_locus_tag=CCO56_22125 NZ_NPMB01000015.1 Protein Homology CDS 28216 28539 . + 0 ID=cds-WP_001160725.1;Parent=gene-CCO56_RS22140;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO56_RS22140;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 28536 29366 . + . ID=gene-CCO56_RS22145;Name=CCO56_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22145;old_locus_tag=CCO56_22130 NZ_NPMB01000015.1 Protein Homology CDS 28536 29366 . + 0 ID=cds-WP_080177013.1;Parent=gene-CCO56_RS22145;Dbxref=GenBank:WP_080177013.1;Name=WP_080177013.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=CCO56_RS22145;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_080177013.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 29363 30376 . - . ID=gene-CCO56_RS22150;Name=CCO56_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22150;old_locus_tag=CCO56_22135 NZ_NPMB01000015.1 Protein Homology CDS 29363 30376 . - 0 ID=cds-WP_023216392.1;Parent=gene-CCO56_RS22150;Dbxref=GenBank:WP_023216392.1;Name=WP_023216392.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=CCO56_RS22150;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_023216392.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 30472 31905 . - . ID=gene-CCO56_RS22155;Name=CCO56_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22155;old_locus_tag=CCO56_22140 NZ_NPMB01000015.1 Protein Homology CDS 30472 31905 . - 0 ID=cds-WP_023263020.1;Parent=gene-CCO56_RS22155;Dbxref=GenBank:WP_023263020.1;Name=WP_023263020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=CCO56_RS22155;product=SDR family oxidoreductase;protein_id=WP_023263020.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 31916 32917 . - . ID=gene-CCO56_RS22160;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=CCO56_RS22160;old_locus_tag=CCO56_22145 NZ_NPMB01000015.1 Protein Homology CDS 31916 32917 . - 0 ID=cds-WP_000566346.1;Parent=gene-CCO56_RS22160;Dbxref=GenBank:WP_000566346.1;Name=WP_000566346.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=CCO56_RS22160;product=low-specificity L-threonine aldolase;protein_id=WP_000566346.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 32956 34674 . - . ID=gene-CCO56_RS22165;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=CCO56_RS22165;old_locus_tag=CCO56_22150 NZ_NPMB01000015.1 Protein Homology CDS 32956 34674 . - 0 ID=cds-WP_058821564.1;Parent=gene-CCO56_RS22165;Dbxref=GenBank:WP_058821564.1;Name=WP_058821564.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=CCO56_RS22165;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_058821564.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 34832 35800 . - . ID=gene-CCO56_RS22170;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=CCO56_RS22170;old_locus_tag=CCO56_22155 NZ_NPMB01000015.1 Protein Homology CDS 34832 35800 . - 0 ID=cds-WP_000178698.1;Parent=gene-CCO56_RS22170;Dbxref=GenBank:WP_000178698.1;Name=WP_000178698.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=CCO56_RS22170;product=NADH oxidoreductase;protein_id=WP_000178698.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 35812 37464 . - . ID=gene-CCO56_RS22175;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=CCO56_RS22175;old_locus_tag=CCO56_22160 NZ_NPMB01000015.1 Protein Homology CDS 35812 37464 . - 0 ID=cds-WP_000458785.1;Parent=gene-CCO56_RS22175;Dbxref=GenBank:WP_000458785.1;Name=WP_000458785.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=CCO56_RS22175;product=hydroxylamine reductase;protein_id=WP_000458785.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 37608 38507 . - . ID=gene-CCO56_RS22180;Name=CCO56_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22180;old_locus_tag=CCO56_22165 NZ_NPMB01000015.1 Protein Homology CDS 37608 38507 . - 0 ID=cds-WP_000491118.1;Parent=gene-CCO56_RS22180;Dbxref=GenBank:WP_000491118.1;Name=WP_000491118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=CCO56_RS22180;product=lysine exporter LysO family protein;protein_id=WP_000491118.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 38708 40366 . + . ID=gene-CCO56_RS22190;Name=CCO56_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22190;old_locus_tag=CCO56_22175 NZ_NPMB01000015.1 Protein Homology CDS 38708 40366 . + 0 ID=cds-WP_000599770.1;Parent=gene-CCO56_RS22190;Dbxref=GenBank:WP_000599770.1;Name=WP_000599770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=CCO56_RS22190;product=ATP-dependent endonuclease;protein_id=WP_000599770.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 40363 41313 . - . ID=gene-CCO56_RS22195;Name=CCO56_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22195;old_locus_tag=CCO56_22180 NZ_NPMB01000015.1 Protein Homology CDS 40363 41313 . - 0 ID=cds-WP_001528818.1;Parent=gene-CCO56_RS22195;Dbxref=GenBank:WP_001528818.1;Name=WP_001528818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=CCO56_RS22195;product=VirK/YbjX family protein;protein_id=WP_001528818.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 41459 42577 . + . ID=gene-CCO56_RS22200;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=CCO56_RS22200;old_locus_tag=CCO56_22185 NZ_NPMB01000015.1 Protein Homology CDS 41459 42577 . + 0 ID=cds-WP_023136812.1;Parent=gene-CCO56_RS22200;Dbxref=GenBank:WP_023136812.1;Name=WP_023136812.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=CCO56_RS22200;product=macrolide transporter subunit MacA;protein_id=WP_023136812.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 42574 44520 . + . ID=gene-CCO56_RS22205;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=CCO56_RS22205;old_locus_tag=CCO56_22190 NZ_NPMB01000015.1 Protein Homology CDS 42574 44520 . + 0 ID=cds-WP_023262971.1;Parent=gene-CCO56_RS22205;Dbxref=GenBank:WP_023262971.1;Name=WP_023262971.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=CCO56_RS22205;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_023262971.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 44650 44871 . - . ID=gene-CCO56_RS22215;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=CCO56_RS22215;old_locus_tag=CCO56_22200 NZ_NPMB01000015.1 Protein Homology CDS 44650 44871 . - 0 ID=cds-WP_000447499.1;Parent=gene-CCO56_RS22215;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=CCO56_RS22215;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 45022 45099 . + . ID=gene-CCO56_RS23910;Name=CCO56_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23910 NZ_NPMB01000015.1 Protein Homology CDS 45022 45099 . + 0 ID=cds-WP_212742690.1;Parent=gene-CCO56_RS23910;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=CCO56_RS23910;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 45195 45515 . + . ID=gene-CCO56_RS22220;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=CCO56_RS22220;old_locus_tag=CCO56_22205 NZ_NPMB01000015.1 Protein Homology CDS 45195 45515 . + 0 ID=cds-WP_000520789.1;Parent=gene-CCO56_RS22220;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=CCO56_RS22220;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 45546 47822 . + . ID=gene-CCO56_RS22225;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=CCO56_RS22225;old_locus_tag=CCO56_22210 NZ_NPMB01000015.1 Protein Homology CDS 45546 47822 . + 0 ID=cds-WP_000934064.1;Parent=gene-CCO56_RS22225;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=CCO56_RS22225;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 48274 48361 . - . ID=gene-CCO56_RS22235;Name=CCO56_RS22235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS22235;old_locus_tag=CCO56_22220 NZ_NPMB01000015.1 tRNAscan-SE tRNA 48274 48361 . - . ID=rna-CCO56_RS22235;Parent=gene-CCO56_RS22235;anticodon=(pos:complement(48325..48327));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS22235;product=tRNA-Ser NZ_NPMB01000015.1 tRNAscan-SE exon 48274 48361 . - . ID=exon-CCO56_RS22235-1;Parent=rna-CCO56_RS22235;anticodon=(pos:complement(48325..48327));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS22235;product=tRNA-Ser NZ_NPMB01000015.1 RefSeq gene 48510 49187 . - . ID=gene-CCO56_RS22240;Name=CCO56_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22240;old_locus_tag=CCO56_22225 NZ_NPMB01000015.1 Protein Homology CDS 48510 49187 . - 0 ID=cds-WP_000097893.1;Parent=gene-CCO56_RS22240;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=CCO56_RS22240;product=hydrolase;protein_id=WP_000097893.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 49207 50067 . - . ID=gene-CCO56_RS22245;Name=CCO56_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22245;old_locus_tag=CCO56_22230 NZ_NPMB01000015.1 Protein Homology CDS 49207 50067 . - 0 ID=cds-WP_000809969.1;Parent=gene-CCO56_RS22245;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=CCO56_RS22245;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 50176 51087 . + . ID=gene-CCO56_RS22250;Name=CCO56_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22250;old_locus_tag=CCO56_22235 NZ_NPMB01000015.1 Protein Homology CDS 50176 51087 . + 0 ID=cds-WP_000597928.1;Parent=gene-CCO56_RS22250;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=CCO56_RS22250;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 51178 51396 . - . ID=gene-CCO56_RS22255;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CCO56_RS22255;old_locus_tag=CCO56_22240 NZ_NPMB01000015.1 Protein Homology CDS 51178 51396 . - 0 ID=cds-WP_001040187.1;Parent=gene-CCO56_RS22255;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=CCO56_RS22255;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 51708 52412 . - . ID=gene-CCO56_RS22265;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=CCO56_RS22265;old_locus_tag=CCO56_22250 NZ_NPMB01000015.1 Protein Homology CDS 51708 52412 . - 0 ID=cds-WP_001241644.1;Parent=gene-CCO56_RS22265;Dbxref=GenBank:WP_001241644.1;Name=WP_001241644.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=CCO56_RS22265;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241644.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 52457 54178 . - . ID=gene-CCO56_RS22270;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=CCO56_RS22270;old_locus_tag=CCO56_22255 NZ_NPMB01000015.1 Protein Homology CDS 52457 54178 . - 0 ID=cds-WP_001202249.1;Parent=gene-CCO56_RS22270;Dbxref=GenBank:WP_001202249.1;Name=WP_001202249.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=CCO56_RS22270;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202249.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 54179 55945 . - . ID=gene-CCO56_RS22275;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=CCO56_RS22275;old_locus_tag=CCO56_22260 NZ_NPMB01000015.1 Protein Homology CDS 54179 55945 . - 0 ID=cds-WP_001044531.1;Parent=gene-CCO56_RS22275;Dbxref=GenBank:WP_001044531.1;Name=WP_001044531.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=CCO56_RS22275;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044531.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 56060 57028 . - . ID=gene-CCO56_RS22280;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CCO56_RS22280;old_locus_tag=CCO56_22265 NZ_NPMB01000015.1 Protein Homology CDS 56060 57028 . - 0 ID=cds-WP_000537406.1;Parent=gene-CCO56_RS22280;Dbxref=GenBank:WP_000537406.1;Name=WP_000537406.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=CCO56_RS22280;product=thioredoxin-disulfide reductase;protein_id=WP_000537406.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 57575 58069 . + . ID=gene-CCO56_RS22290;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=CCO56_RS22290;old_locus_tag=CCO56_22275 NZ_NPMB01000015.1 Protein Homology CDS 57575 58069 . + 0 ID=cds-WP_000228469.1;Parent=gene-CCO56_RS22290;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=CCO56_RS22290;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 58204 62190 . + . ID=gene-CCO56_RS22295;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=CCO56_RS22295;old_locus_tag=CCO56_22280 NZ_NPMB01000015.1 Protein Homology CDS 58204 62190 . + 0 ID=cds-WP_094882074.1;Parent=gene-CCO56_RS22295;Dbxref=GenBank:WP_094882074.1;Name=WP_094882074.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=CCO56_RS22295;product=DNA translocase FtsK;protein_id=WP_094882074.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 62333 62944 . + . ID=gene-CCO56_RS22300;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=CCO56_RS22300;old_locus_tag=CCO56_22285 NZ_NPMB01000015.1 Protein Homology CDS 62333 62944 . + 0 ID=cds-WP_001519746.1;Parent=gene-CCO56_RS22300;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=CCO56_RS22300;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001519746.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 62954 64297 . + . ID=gene-CCO56_RS22305;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=CCO56_RS22305;old_locus_tag=CCO56_22290 NZ_NPMB01000015.1 Protein Homology CDS 62954 64297 . + 0 ID=cds-WP_080177328.1;Parent=gene-CCO56_RS22305;Dbxref=GenBank:WP_080177328.1;Name=WP_080177328.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=CCO56_RS22305;product=replication-associated recombination protein RarA;protein_id=WP_080177328.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 64556 65848 . + . ID=gene-CCO56_RS22315;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CCO56_RS22315;old_locus_tag=CCO56_22300 NZ_NPMB01000015.1 Protein Homology CDS 64556 65848 . + 0 ID=cds-WP_000886699.1;Parent=gene-CCO56_RS22315;Dbxref=GenBank:WP_000886699.1;Name=WP_000886699.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=CCO56_RS22315;product=serine--tRNA ligase;protein_id=WP_000886699.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 66085 68529 . + . ID=gene-CCO56_RS22320;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=CCO56_RS22320;old_locus_tag=CCO56_22305 NZ_NPMB01000015.1 Protein Homology CDS 66085 68529 . + 0 ID=cds-WP_023197077.1;Parent=gene-CCO56_RS22320;Dbxref=GenBank:WP_023197077.1;Name=WP_023197077.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=CCO56_RS22320;product=dimethylsulfoxide reductase subunit A;protein_id=WP_023197077.1;transl_table=11 NZ_NPMB01000015.1 RefSeq gene 68540 68666 . + . ID=gene-CCO56_RS22325;Name=CCO56_RS22325;end_range=68666,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22325;old_locus_tag=CCO56_22310;partial=true NZ_NPMB01000015.1 Protein Homology CDS 68540 68666 . + 0 ID=cds-WP_001708769.1-2;Parent=gene-CCO56_RS22325;Dbxref=GenBank:WP_001708769.1;Name=WP_001708769.1;end_range=68666,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO56_RS22325;partial=true;product=4Fe-4S binding protein;protein_id=WP_001708769.1;transl_table=11 ##sequence-region NZ_NPMB01000016.1 1 46117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000016.1 RefSeq region 1 46117 . + . ID=NZ_NPMB01000016.1:1..46117;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000016.1 RefSeq gene 4 119 . + . ID=gene-CCO56_RS22330;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO56_RS22330;old_locus_tag=CCO56_22315 NZ_NPMB01000016.1 cmsearch rRNA 4 119 . + . ID=rna-CCO56_RS22330;Parent=gene-CCO56_RS22330;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS22330;product=5S ribosomal RNA NZ_NPMB01000016.1 cmsearch exon 4 119 . + . ID=exon-CCO56_RS22330-1;Parent=rna-CCO56_RS22330;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS22330;product=5S ribosomal RNA NZ_NPMB01000016.1 RefSeq gene 134 209 . + . ID=gene-CCO56_RS22335;Name=CCO56_RS22335;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS22335;old_locus_tag=CCO56_22320 NZ_NPMB01000016.1 tRNAscan-SE tRNA 134 209 . + . ID=rna-CCO56_RS22335;Parent=gene-CCO56_RS22335;anticodon=(pos:167..169);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS22335;product=tRNA-Thr NZ_NPMB01000016.1 tRNAscan-SE exon 134 209 . + . ID=exon-CCO56_RS22335-1;Parent=rna-CCO56_RS22335;anticodon=(pos:167..169);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS22335;product=tRNA-Thr NZ_NPMB01000016.1 RefSeq gene 249 364 . + . ID=gene-CCO56_RS22340;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO56_RS22340;old_locus_tag=CCO56_22325 NZ_NPMB01000016.1 cmsearch rRNA 249 364 . + . ID=rna-CCO56_RS22340;Parent=gene-CCO56_RS22340;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS22340;product=5S ribosomal RNA NZ_NPMB01000016.1 cmsearch exon 249 364 . + . ID=exon-CCO56_RS22340-1;Parent=rna-CCO56_RS22340;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS22340;product=5S ribosomal RNA NZ_NPMB01000016.1 RefSeq gene 980 1201 . - . ID=gene-CCO56_RS22345;Name=CCO56_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22345;old_locus_tag=CCO56_22330 NZ_NPMB01000016.1 Protein Homology CDS 980 1201 . - 0 ID=cds-WP_000825645.1;Parent=gene-CCO56_RS22345;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=CCO56_RS22345;product=membrane protein;protein_id=WP_000825645.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 1437 4550 . - . ID=gene-CCO56_RS22350;Name=CCO56_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22350;old_locus_tag=CCO56_22335 NZ_NPMB01000016.1 Protein Homology CDS 1437 4550 . - 0 ID=cds-WP_080177143.1;Parent=gene-CCO56_RS22350;Dbxref=GenBank:WP_080177143.1;Name=WP_080177143.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=CCO56_RS22350;product=efflux RND transporter permease subunit;protein_id=WP_080177143.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 4562 5719 . - . ID=gene-CCO56_RS22355;Name=CCO56_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22355;old_locus_tag=CCO56_22340 NZ_NPMB01000016.1 Protein Homology CDS 4562 5719 . - 0 ID=cds-WP_000160380.1;Parent=gene-CCO56_RS22355;Dbxref=GenBank:WP_000160380.1;Name=WP_000160380.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=CCO56_RS22355;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160380.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 6132 6794 . + . ID=gene-CCO56_RS22360;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=CCO56_RS22360;old_locus_tag=CCO56_22345 NZ_NPMB01000016.1 Protein Homology CDS 6132 6794 . + 0 ID=cds-WP_001085721.1;Parent=gene-CCO56_RS22360;Dbxref=GenBank:WP_001085721.1;Name=WP_001085721.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=CCO56_RS22360;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085721.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 6797 8896 . - . ID=gene-CCO56_RS22365;Name=CCO56_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22365;old_locus_tag=CCO56_22350 NZ_NPMB01000016.1 Protein Homology CDS 6797 8896 . - 0 ID=cds-WP_080177142.1;Parent=gene-CCO56_RS22365;Dbxref=GenBank:WP_080177142.1;Name=WP_080177142.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=CCO56_RS22365;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_080177142.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 9047 9211 . - . ID=gene-CCO56_RS22370;Name=CCO56_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22370;old_locus_tag=CCO56_22355 NZ_NPMB01000016.1 Protein Homology CDS 9047 9211 . - 0 ID=cds-WP_000620015.1;Parent=gene-CCO56_RS22370;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=CCO56_RS22370;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 9294 10178 . - . ID=gene-CCO56_RS22375;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=CCO56_RS22375;old_locus_tag=CCO56_22360 NZ_NPMB01000016.1 Protein Homology CDS 9294 10178 . - 0 ID=cds-WP_000642611.1;Parent=gene-CCO56_RS22375;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=CCO56_RS22375;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 10264 10560 . - . ID=gene-CCO56_RS22380;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=CCO56_RS22380;old_locus_tag=CCO56_22365 NZ_NPMB01000016.1 Protein Homology CDS 10264 10560 . - 0 ID=cds-WP_000462905.1;Parent=gene-CCO56_RS22380;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=CCO56_RS22380;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 10586 11551 . - . ID=gene-CCO56_RS22385;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CCO56_RS22385;old_locus_tag=CCO56_22370 NZ_NPMB01000016.1 Protein Homology CDS 10586 11551 . - 0 ID=cds-WP_001219664.1;Parent=gene-CCO56_RS22385;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=CCO56_RS22385;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 12212 13093 . - . ID=gene-CCO56_RS22390;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CCO56_RS22390;old_locus_tag=CCO56_22375 NZ_NPMB01000016.1 Protein Homology CDS 12212 13093 . - 0 ID=cds-WP_023137162.1;Parent=gene-CCO56_RS22390;Dbxref=GenBank:WP_023137162.1;Name=WP_023137162.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=CCO56_RS22390;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_023137162.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 13105 14556 . - . ID=gene-CCO56_RS22395;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=CCO56_RS22395;old_locus_tag=CCO56_22380 NZ_NPMB01000016.1 Protein Homology CDS 13105 14556 . - 0 ID=cds-WP_001175684.1;Parent=gene-CCO56_RS22395;Dbxref=GenBank:WP_001175684.1;Name=WP_001175684.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=CCO56_RS22395;product=sodium/pantothenate symporter;protein_id=WP_001175684.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 14546 14788 . - . ID=gene-CCO56_RS22400;Name=CCO56_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22400;old_locus_tag=CCO56_22385 NZ_NPMB01000016.1 Protein Homology CDS 14546 14788 . - 0 ID=cds-WP_000340017.1;Parent=gene-CCO56_RS22400;Dbxref=GenBank:WP_000340017.1;Name=WP_000340017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=CCO56_RS22400;product=YhdT family protein;protein_id=WP_000340017.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 14897 16246 . - . ID=gene-CCO56_RS22405;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CCO56_RS22405;old_locus_tag=CCO56_22390 NZ_NPMB01000016.1 Protein Homology CDS 14897 16246 . - 0 ID=cds-WP_000884627.1;Parent=gene-CCO56_RS22405;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=CCO56_RS22405;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 16257 16727 . - . ID=gene-CCO56_RS22410;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CCO56_RS22410;old_locus_tag=CCO56_22395 NZ_NPMB01000016.1 Protein Homology CDS 16257 16727 . - 0 ID=cds-WP_000354628.1;Parent=gene-CCO56_RS22410;Dbxref=GenBank:WP_000354628.1;Name=WP_000354628.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=CCO56_RS22410;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354628.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 17120 17719 . - . ID=gene-CCO56_RS22415;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=CCO56_RS22415;old_locus_tag=CCO56_22400 NZ_NPMB01000016.1 Protein Homology CDS 17120 17719 . - 0 ID=cds-WP_001240053.1;Parent=gene-CCO56_RS22415;Dbxref=GenBank:WP_001240053.1;Name=WP_001240053.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=CCO56_RS22415;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240053.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 17720 18724 . - . ID=gene-CCO56_RS22420;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=CCO56_RS22420;old_locus_tag=CCO56_22405 NZ_NPMB01000016.1 Protein Homology CDS 17720 18724 . - 0 ID=cds-WP_000723876.1;Parent=gene-CCO56_RS22420;Dbxref=GenBank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=CCO56_RS22420;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 18837 19811 . - . ID=gene-CCO56_RS22425;Name=CCO56_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22425;old_locus_tag=CCO56_22410 NZ_NPMB01000016.1 Protein Homology CDS 18837 19811 . - 0 ID=cds-WP_052942986.1;Parent=gene-CCO56_RS22425;Dbxref=GenBank:WP_052942986.1;Name=WP_052942986.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=CCO56_RS22425;product=MDR family oxidoreductase;protein_id=WP_052942986.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 20015 21955 . + . ID=gene-CCO56_RS22430;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=CCO56_RS22430;old_locus_tag=CCO56_22415 NZ_NPMB01000016.1 Protein Homology CDS 20015 21955 . + 0 ID=cds-WP_001241381.1;Parent=gene-CCO56_RS22430;Dbxref=GenBank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=CCO56_RS22430;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 22263 23306 . + . ID=gene-CCO56_RS22445;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=CCO56_RS22445;old_locus_tag=CCO56_22430 NZ_NPMB01000016.1 Protein Homology CDS 22263 23306 . + 0 ID=cds-WP_000913396.1;Parent=gene-CCO56_RS22445;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=CCO56_RS22445;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 23371 24423 . + . ID=gene-CCO56_RS22450;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CCO56_RS22450;old_locus_tag=CCO56_22435 NZ_NPMB01000016.1 Protein Homology CDS 23371 24423 . + 0 ID=cds-WP_000802538.1;Parent=gene-CCO56_RS22450;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=CCO56_RS22450;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 24426 24914 . + . ID=gene-CCO56_RS22455;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CCO56_RS22455;old_locus_tag=CCO56_22440 NZ_NPMB01000016.1 Protein Homology CDS 24426 24914 . + 0 ID=cds-WP_000179403.1;Parent=gene-CCO56_RS22455;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=CCO56_RS22455;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 24923 25516 . + . ID=gene-CCO56_RS22460;Name=CCO56_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22460;old_locus_tag=CCO56_22445 NZ_NPMB01000016.1 Protein Homology CDS 24923 25516 . + 0 ID=cds-WP_000210306.1;Parent=gene-CCO56_RS22460;Dbxref=GenBank:WP_000210306.1;Name=WP_000210306.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=CCO56_RS22460;product=Maf family protein;protein_id=WP_000210306.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 25506 26975 . + . ID=gene-CCO56_RS22465;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=CCO56_RS22465;old_locus_tag=CCO56_22450 NZ_NPMB01000016.1 Protein Homology CDS 25506 26975 . + 0 ID=cds-WP_000123188.1;Parent=gene-CCO56_RS22465;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=CCO56_RS22465;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 27082 30882 . + . ID=gene-CCO56_RS22470;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=CCO56_RS22470;old_locus_tag=CCO56_22455 NZ_NPMB01000016.1 Protein Homology CDS 27082 30882 . + 0 ID=cds-WP_001253511.1;Parent=gene-CCO56_RS22470;Dbxref=GenBank:WP_001253511.1;Name=WP_001253511.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=CCO56_RS22470;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253511.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 31027 32472 . + . ID=gene-CCO56_RS22475;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=CCO56_RS22475;old_locus_tag=CCO56_22460 NZ_NPMB01000016.1 Protein Homology CDS 31027 32472 . + 0 ID=cds-WP_080177141.1;Parent=gene-CCO56_RS22475;Dbxref=GenBank:WP_080177141.1;Name=WP_080177141.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=CCO56_RS22475;product=metalloprotease TldD;protein_id=WP_080177141.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 32594 33523 . - . ID=gene-CCO56_RS22480;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=CCO56_RS22480;old_locus_tag=CCO56_22465 NZ_NPMB01000016.1 Protein Homology CDS 32594 33523 . - 0 ID=cds-WP_000440300.1;Parent=gene-CCO56_RS22480;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=CCO56_RS22480;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 33705 33908 . + . ID=gene-CCO56_RS22485;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=CCO56_RS22485;old_locus_tag=CCO56_22470 NZ_NPMB01000016.1 Protein Homology CDS 33705 33908 . + 0 ID=cds-WP_000051840.1;Parent=gene-CCO56_RS22485;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=CCO56_RS22485;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 33916 34848 . + . ID=gene-CCO56_RS22490;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=CCO56_RS22490;old_locus_tag=CCO56_22475 NZ_NPMB01000016.1 Protein Homology CDS 33916 34848 . + 0 ID=cds-WP_000855134.1;Parent=gene-CCO56_RS22490;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=CCO56_RS22490;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 34854 36821 . + . ID=gene-CCO56_RS22495;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=CCO56_RS22495;old_locus_tag=CCO56_22480 NZ_NPMB01000016.1 Protein Homology CDS 34854 36821 . + 0 ID=cds-WP_000510913.1;Parent=gene-CCO56_RS22495;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=CCO56_RS22495;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 36993 37265 . + . ID=gene-CCO56_RS22500;Name=CCO56_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22500;old_locus_tag=CCO56_22485 NZ_NPMB01000016.1 Protein Homology CDS 36993 37265 . + 0 ID=cds-WP_001103888.1;Parent=gene-CCO56_RS22500;Dbxref=GenBank:WP_001103888.1;Name=WP_001103888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=CCO56_RS22500;product=barstar family protein;protein_id=WP_001103888.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 37326 37592 . - . ID=gene-CCO56_RS22505;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=CCO56_RS22505;old_locus_tag=CCO56_22490 NZ_NPMB01000016.1 Protein Homology CDS 37326 37592 . - 0 ID=cds-WP_000853277.1;Parent=gene-CCO56_RS22505;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=CCO56_RS22505;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 37696 37959 . - . ID=gene-CCO56_RS22510;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=CCO56_RS22510;old_locus_tag=CCO56_22495 NZ_NPMB01000016.1 Protein Homology CDS 37696 37959 . - 0 ID=cds-WP_000695695.1;Parent=gene-CCO56_RS22510;Dbxref=GenBank:WP_000695695.1;Name=WP_000695695.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=CCO56_RS22510;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695695.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 38324 38794 . - . ID=gene-CCO56_RS22515;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=CCO56_RS22515;old_locus_tag=CCO56_22500 NZ_NPMB01000016.1 Protein Homology CDS 38324 38794 . - 0 ID=cds-WP_001257852.1;Parent=gene-CCO56_RS22515;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=CCO56_RS22515;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 39209 40147 . + . ID=gene-CCO56_RS22520;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CCO56_RS22520;old_locus_tag=CCO56_22505 NZ_NPMB01000016.1 Protein Homology CDS 39209 40147 . + 0 ID=cds-WP_000861586.1;Parent=gene-CCO56_RS22520;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=CCO56_RS22520;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 40267 40896 . + . ID=gene-CCO56_RS22525;Name=CCO56_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22525;old_locus_tag=CCO56_22510 NZ_NPMB01000016.1 Protein Homology CDS 40267 40896 . + 0 ID=cds-WP_000723776.1;Parent=gene-CCO56_RS22525;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=CCO56_RS22525;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 40883 41548 . + . ID=gene-CCO56_RS22530;Name=CCO56_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22530;old_locus_tag=CCO56_22515 NZ_NPMB01000016.1 Protein Homology CDS 40883 41548 . + 0 ID=cds-WP_001171581.1;Parent=gene-CCO56_RS22530;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=CCO56_RS22530;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 41759 43027 . + . ID=gene-CCO56_RS22535;Name=CCO56_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22535;old_locus_tag=CCO56_22520 NZ_NPMB01000016.1 Protein Homology CDS 41759 43027 . + 0 ID=cds-WP_000433390.1;Parent=gene-CCO56_RS22535;Dbxref=GenBank:WP_000433390.1;Name=WP_000433390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=CCO56_RS22535;product=SLC13 family permease;protein_id=WP_000433390.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 43060 43959 . + . ID=gene-CCO56_RS22540;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=CCO56_RS22540;old_locus_tag=CCO56_22525 NZ_NPMB01000016.1 Protein Homology CDS 43060 43959 . + 0 ID=cds-WP_000045349.1;Parent=gene-CCO56_RS22540;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=CCO56_RS22540;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 43959 44576 . + . ID=gene-CCO56_RS22545;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=CCO56_RS22545;old_locus_tag=CCO56_22530 NZ_NPMB01000016.1 Protein Homology CDS 43959 44576 . + 0 ID=cds-WP_080177140.1;Parent=gene-CCO56_RS22545;Dbxref=GenBank:WP_080177140.1;Name=WP_080177140.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=CCO56_RS22545;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_080177140.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 44733 44981 . + . ID=gene-CCO56_RS22550;Name=CCO56_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22550;old_locus_tag=CCO56_22535 NZ_NPMB01000016.1 Protein Homology CDS 44733 44981 . + 0 ID=cds-WP_076166666.1;Parent=gene-CCO56_RS22550;Dbxref=GenBank:WP_076166666.1;Name=WP_076166666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529289.1;locus_tag=CCO56_RS22550;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_076166666.1;transl_table=11 NZ_NPMB01000016.1 RefSeq gene 44998 46117 . + . ID=gene-CCO56_RS22555;Name=CCO56_RS22555;end_range=46117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22555;old_locus_tag=CCO56_22540;partial=true NZ_NPMB01000016.1 Protein Homology CDS 44998 46117 . + 0 ID=cds-WP_141034758.1;Parent=gene-CCO56_RS22555;Dbxref=GenBank:WP_141034758.1;Name=WP_141034758.1;Ontology_term=GO:0003824;end_range=46117,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO56_RS22555;partial=true;product=pyruvate carboxylase subunit B;protein_id=WP_141034758.1;transl_table=11 ##sequence-region NZ_NPMB01000017.1 1 31748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000017.1 RefSeq region 1 31748 . + . ID=NZ_NPMB01000017.1:1..31748;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000017.1 RefSeq gene 673 2262 . + . ID=gene-CCO56_RS22565;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CCO56_RS22565;old_locus_tag=CCO56_22550 NZ_NPMB01000017.1 Protein Homology CDS 673 2262 . + 0 ID=cds-WP_001187520.1;Parent=gene-CCO56_RS22565;Dbxref=GenBank:WP_001187520.1;Name=WP_001187520.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=CCO56_RS22565;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187520.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 2278 3567 . + . ID=gene-CCO56_RS22570;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CCO56_RS22570;old_locus_tag=CCO56_22555 NZ_NPMB01000017.1 Protein Homology CDS 2278 3567 . + 0 ID=cds-WP_000866780.1;Parent=gene-CCO56_RS22570;Dbxref=GenBank:WP_000866780.1;Name=WP_000866780.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=CCO56_RS22570;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866780.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 3564 4889 . - . ID=gene-CCO56_RS22575;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=CCO56_RS22575;old_locus_tag=CCO56_22560 NZ_NPMB01000017.1 Protein Homology CDS 3564 4889 . - 0 ID=cds-WP_000617940.1;Parent=gene-CCO56_RS22575;Dbxref=GenBank:WP_000617940.1;Name=WP_000617940.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=CCO56_RS22575;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000617940.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 4895 6292 . - . ID=gene-CCO56_RS22580;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=CCO56_RS22580;old_locus_tag=CCO56_22565 NZ_NPMB01000017.1 Protein Homology CDS 4895 6292 . - 0 ID=cds-WP_053259071.1;Parent=gene-CCO56_RS22580;Dbxref=GenBank:WP_053259071.1;Name=WP_053259071.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=CCO56_RS22580;product=two-component system sensor histidine kinase ZraS;protein_id=WP_053259071.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 6546 7001 . + . ID=gene-CCO56_RS22585;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=CCO56_RS22585;old_locus_tag=CCO56_22570 NZ_NPMB01000017.1 Protein Homology CDS 6546 7001 . + 0 ID=cds-WP_000828129.1;Parent=gene-CCO56_RS22585;Dbxref=GenBank:WP_000828129.1;Name=WP_000828129.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=CCO56_RS22585;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828129.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 7043 7735 . - . ID=gene-CCO56_RS22590;Name=CCO56_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22590;old_locus_tag=CCO56_22575 NZ_NPMB01000017.1 Protein Homology CDS 7043 7735 . - 0 ID=cds-WP_001083932.1;Parent=gene-CCO56_RS22590;Dbxref=GenBank:WP_001083932.1;Name=WP_001083932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=CCO56_RS22590;product=DUF1481 domain-containing protein;protein_id=WP_001083932.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 7747 8019 . - . ID=gene-CCO56_RS22595;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=CCO56_RS22595;old_locus_tag=CCO56_22580 NZ_NPMB01000017.1 Protein Homology CDS 7747 8019 . - 0 ID=cds-WP_001044509.1;Parent=gene-CCO56_RS22595;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=CCO56_RS22595;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 8206 8796 . - . ID=gene-CCO56_RS22600;Name=CCO56_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22600;old_locus_tag=CCO56_22585 NZ_NPMB01000017.1 Protein Homology CDS 8206 8796 . - 0 ID=cds-WP_000940094.1;Parent=gene-CCO56_RS22600;Dbxref=GenBank:WP_000940094.1;Name=WP_000940094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=CCO56_RS22600;product=YjaG family protein;protein_id=WP_000940094.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 8838 9509 . - . ID=gene-CCO56_RS22605;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=CCO56_RS22605;old_locus_tag=CCO56_22590 NZ_NPMB01000017.1 Protein Homology CDS 8838 9509 . - 0 ID=cds-WP_001529320.1;Parent=gene-CCO56_RS22605;Dbxref=GenBank:WP_001529320.1;Name=WP_001529320.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=CCO56_RS22605;product=deoxyribonuclease V;protein_id=WP_001529320.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 9519 10583 . - . ID=gene-CCO56_RS22610;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CCO56_RS22610;old_locus_tag=CCO56_22595 NZ_NPMB01000017.1 Protein Homology CDS 9519 10583 . - 0 ID=cds-WP_000137620.1;Parent=gene-CCO56_RS22610;Dbxref=GenBank:WP_000137620.1;Name=WP_000137620.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=CCO56_RS22610;product=uroporphyrinogen decarboxylase;protein_id=WP_000137620.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 10624 11397 . - . ID=gene-CCO56_RS22615;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=CCO56_RS22615;old_locus_tag=CCO56_22600 NZ_NPMB01000017.1 Protein Homology CDS 10624 11397 . - 0 ID=cds-WP_000373958.1;Parent=gene-CCO56_RS22615;Dbxref=GenBank:WP_000373958.1;Name=WP_000373958.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=CCO56_RS22615;product=NAD(+) diphosphatase;protein_id=WP_000373958.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 11490 11978 . + . ID=gene-CCO56_RS22620;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=CCO56_RS22620;old_locus_tag=CCO56_22605 NZ_NPMB01000017.1 Protein Homology CDS 11490 11978 . + 0 ID=cds-WP_000934317.1;Parent=gene-CCO56_RS22620;Dbxref=GenBank:WP_000934317.1;Name=WP_000934317.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=CCO56_RS22620;product=sigma D regulator;protein_id=WP_000934317.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 12342 14237 . + . ID=gene-CCO56_RS22625;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CCO56_RS22625;old_locus_tag=CCO56_22610 NZ_NPMB01000017.1 Protein Homology CDS 12342 14237 . + 0 ID=cds-WP_001529319.1;Parent=gene-CCO56_RS22625;Dbxref=GenBank:WP_001529319.1;Name=WP_001529319.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541272.1;locus_tag=CCO56_RS22625;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_001529319.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 14237 14872 . + . ID=gene-CCO56_RS22630;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CCO56_RS22630;old_locus_tag=CCO56_22615 NZ_NPMB01000017.1 Protein Homology CDS 14237 14872 . + 0 ID=cds-WP_001529311.1;Parent=gene-CCO56_RS22630;Dbxref=GenBank:WP_001529311.1;Name=WP_001529311.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=CCO56_RS22630;product=thiamine phosphate synthase;protein_id=WP_001529311.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 14865 15623 . + . ID=gene-CCO56_RS22635;Name=CCO56_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22635;old_locus_tag=CCO56_22620 NZ_NPMB01000017.1 Protein Homology CDS 14865 15623 . + 0 ID=cds-WP_001529316.1;Parent=gene-CCO56_RS22635;Dbxref=GenBank:WP_001529316.1;Name=WP_001529316.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=CCO56_RS22635;product=HesA/MoeB/ThiF family protein;protein_id=WP_001529316.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 15604 15804 . + . ID=gene-CCO56_RS22640;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CCO56_RS22640;old_locus_tag=CCO56_22625 NZ_NPMB01000017.1 Protein Homology CDS 15604 15804 . + 0 ID=cds-WP_001529312.1;Parent=gene-CCO56_RS22640;Dbxref=GenBank:WP_001529312.1;Name=WP_001529312.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=CCO56_RS22640;product=sulfur carrier protein ThiS;protein_id=WP_001529312.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 15806 16576 . + . ID=gene-CCO56_RS22645;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=CCO56_RS22645;old_locus_tag=CCO56_22630 NZ_NPMB01000017.1 Protein Homology CDS 15806 16576 . + 0 ID=cds-WP_001529310.1;Parent=gene-CCO56_RS22645;Dbxref=GenBank:WP_001529310.1;Name=WP_001529310.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=CCO56_RS22645;product=thiazole synthase;protein_id=WP_001529310.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 16573 17706 . + . ID=gene-CCO56_RS22650;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=CCO56_RS22650;old_locus_tag=CCO56_22635 NZ_NPMB01000017.1 Protein Homology CDS 16573 17706 . + 0 ID=cds-WP_001529309.1;Parent=gene-CCO56_RS22650;Dbxref=GenBank:WP_001529309.1;Name=WP_001529309.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=CCO56_RS22650;product=2-iminoacetate synthase ThiH;protein_id=WP_001529309.1;transl_table=11 NZ_NPMB01000017.1 RefSeq pseudogene 17860 18044 . - . ID=gene-CCO56_RS22655;Name=CCO56_RS22655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS22655;old_locus_tag=CCO56_22640;partial=true;pseudo=true;start_range=.,17860 NZ_NPMB01000017.1 Protein Homology CDS 17860 18044 . - 0 ID=cds-CCO56_RS22655;Parent=gene-CCO56_RS22655;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=CCO56_RS22655;partial=true;product=hypothetical protein;pseudo=true;start_range=.,17860;transl_table=11 NZ_NPMB01000017.1 RefSeq pseudogene 18027 18134 . + . ID=gene-CCO56_RS24210;Name=CCO56_RS24210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24210;partial=true;pseudo=true;start_range=.,18027 NZ_NPMB01000017.1 Protein Homology CDS 18027 18134 . + 0 ID=cds-CCO56_RS24210;Parent=gene-CCO56_RS24210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=CCO56_RS24210;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,18027;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 18456 18800 . + . ID=gene-CCO56_RS22660;Name=CCO56_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22660;old_locus_tag=CCO56_22645 NZ_NPMB01000017.1 Protein Homology CDS 18456 18800 . + 0 ID=cds-WP_031607738.1;Parent=gene-CCO56_RS22660;Dbxref=GenBank:WP_031607738.1;Name=WP_031607738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=CCO56_RS22660;product=hypothetical protein;protein_id=WP_031607738.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 18802 19128 . - . ID=gene-CCO56_RS22665;Name=CCO56_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22665;old_locus_tag=CCO56_22650 NZ_NPMB01000017.1 Protein Homology CDS 18802 19128 . - 0 ID=cds-WP_001663249.1;Parent=gene-CCO56_RS22665;Dbxref=GenBank:WP_001663249.1;Name=WP_001663249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=CCO56_RS22665;product=hypothetical protein;protein_id=WP_001663249.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 19170 23393 . - . ID=gene-CCO56_RS22670;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CCO56_RS22670;old_locus_tag=CCO56_22655 NZ_NPMB01000017.1 Protein Homology CDS 19170 23393 . - 0 ID=cds-WP_000653965.1;Parent=gene-CCO56_RS22670;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=CCO56_RS22670;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 23470 27498 . - . ID=gene-CCO56_RS22675;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CCO56_RS22675;old_locus_tag=CCO56_22660 NZ_NPMB01000017.1 Protein Homology CDS 23470 27498 . - 0 ID=cds-WP_000263105.1;Parent=gene-CCO56_RS22675;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=CCO56_RS22675;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 27816 28181 . - . ID=gene-CCO56_RS22680;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CCO56_RS22680;old_locus_tag=CCO56_22665 NZ_NPMB01000017.1 Protein Homology CDS 27816 28181 . - 0 ID=cds-WP_000028882.1;Parent=gene-CCO56_RS22680;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=CCO56_RS22680;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 28248 28745 . - . ID=gene-CCO56_RS22685;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CCO56_RS22685;old_locus_tag=CCO56_22670 NZ_NPMB01000017.1 Protein Homology CDS 28248 28745 . - 0 ID=cds-WP_001207203.1;Parent=gene-CCO56_RS22685;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=CCO56_RS22685;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 29161 29865 . - . ID=gene-CCO56_RS22695;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CCO56_RS22695;old_locus_tag=CCO56_22680 NZ_NPMB01000017.1 Protein Homology CDS 29161 29865 . - 0 ID=cds-WP_001096676.1;Parent=gene-CCO56_RS22695;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=CCO56_RS22695;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 29869 30297 . - . ID=gene-CCO56_RS22700;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CCO56_RS22700;old_locus_tag=CCO56_22685 NZ_NPMB01000017.1 Protein Homology CDS 29869 30297 . - 0 ID=cds-WP_001085925.1;Parent=gene-CCO56_RS22700;Dbxref=GenBank:WP_001085925.1;Name=WP_001085925.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=CCO56_RS22700;product=50S ribosomal protein L11;protein_id=WP_001085925.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 30455 31000 . - . ID=gene-CCO56_RS22705;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CCO56_RS22705;old_locus_tag=CCO56_22690 NZ_NPMB01000017.1 Protein Homology CDS 30455 31000 . - 0 ID=cds-WP_001287521.1;Parent=gene-CCO56_RS22705;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=CCO56_RS22705;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_NPMB01000017.1 RefSeq gene 31002 31385 . - . ID=gene-CCO56_RS22710;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CCO56_RS22710;old_locus_tag=CCO56_22695 NZ_NPMB01000017.1 Protein Homology CDS 31002 31385 . - 0 ID=cds-WP_001275691.1;Parent=gene-CCO56_RS22710;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=CCO56_RS22710;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 NZ_NPMB01000017.1 RefSeq pseudogene 31615 31748 . - . ID=gene-CCO56_RS22715;Name=tuf;end_range=31748,.;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO56_RS22715;old_locus_tag=CCO56_22700;partial=true;pseudo=true NZ_NPMB01000017.1 Protein Homology CDS 31615 31748 . - 2 ID=cds-CCO56_RS22715;Parent=gene-CCO56_RS22715;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=31748,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO56_RS22715;partial=true;product=elongation factor Tu;pseudo=true;transl_table=11 ##sequence-region NZ_NPMB01000018.1 1 26252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000018.1 RefSeq region 1 26252 . + . ID=NZ_NPMB01000018.1:1..26252;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000018.1 RefSeq gene 299 853 . + . ID=gene-CCO56_RS22720;Name=CCO56_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22720;old_locus_tag=CCO56_22705 NZ_NPMB01000018.1 Protein Homology CDS 299 853 . + 0 ID=cds-WP_001285635.1;Parent=gene-CCO56_RS22720;Dbxref=GenBank:WP_001285635.1;Name=WP_001285635.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=CCO56_RS22720;product=gamma carbonic anhydrase family protein;protein_id=WP_001285635.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 829 1086 . - . ID=gene-CCO56_RS22725;Name=CCO56_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22725;old_locus_tag=CCO56_22710 NZ_NPMB01000018.1 Protein Homology CDS 829 1086 . - 0 ID=cds-WP_001070575.1;Parent=gene-CCO56_RS22725;Dbxref=GenBank:WP_001070575.1;Name=WP_001070575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=CCO56_RS22725;product=DUF1488 domain-containing protein;protein_id=WP_001070575.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 1083 1901 . - . ID=gene-CCO56_RS22730;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CCO56_RS22730;old_locus_tag=CCO56_22715 NZ_NPMB01000018.1 Protein Homology CDS 1083 1901 . - 0 ID=cds-WP_000451202.1;Parent=gene-CCO56_RS22730;Dbxref=GenBank:WP_000451202.1;Name=WP_000451202.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=CCO56_RS22730;product=shikimate dehydrogenase;protein_id=WP_000451202.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 1906 2478 . - . ID=gene-CCO56_RS22735;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=CCO56_RS22735;old_locus_tag=CCO56_22720 NZ_NPMB01000018.1 Protein Homology CDS 1906 2478 . - 0 ID=cds-WP_001063621.1;Parent=gene-CCO56_RS22735;Dbxref=GenBank:WP_001063621.1;Name=WP_001063621.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=CCO56_RS22735;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063621.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 2483 3025 . - . ID=gene-CCO56_RS22740;Name=CCO56_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22740;old_locus_tag=CCO56_22725 NZ_NPMB01000018.1 Protein Homology CDS 2483 3025 . - 0 ID=cds-WP_001129708.1;Parent=gene-CCO56_RS22740;Dbxref=GenBank:WP_001129708.1;Name=WP_001129708.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=CCO56_RS22740;product=DNA topoisomerase family protein;protein_id=WP_001129708.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 3052 3525 . - . ID=gene-CCO56_RS22745;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=CCO56_RS22745;old_locus_tag=CCO56_22730 NZ_NPMB01000018.1 Protein Homology CDS 3052 3525 . - 0 ID=cds-WP_000460663.1;Parent=gene-CCO56_RS22745;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=CCO56_RS22745;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 3497 4621 . - . ID=gene-CCO56_RS22750;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CCO56_RS22750;old_locus_tag=CCO56_22735 NZ_NPMB01000018.1 Protein Homology CDS 3497 4621 . - 0 ID=cds-WP_023217127.1;Parent=gene-CCO56_RS22750;Dbxref=GenBank:WP_023217127.1;Name=WP_023217127.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=CCO56_RS22750;product=DNA-protecting protein DprA;protein_id=WP_023217127.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 4753 5262 . + . ID=gene-CCO56_RS22755;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CCO56_RS22755;old_locus_tag=CCO56_22740 NZ_NPMB01000018.1 Protein Homology CDS 4753 5262 . + 0 ID=cds-WP_000114987.1;Parent=gene-CCO56_RS22755;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=CCO56_RS22755;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 5278 6225 . + . ID=gene-CCO56_RS22760;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CCO56_RS22760;old_locus_tag=CCO56_22745 NZ_NPMB01000018.1 Protein Homology CDS 5278 6225 . + 0 ID=cds-WP_001285165.1;Parent=gene-CCO56_RS22760;Dbxref=GenBank:WP_001285165.1;Name=WP_001285165.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=CCO56_RS22760;product=methionyl-tRNA formyltransferase;protein_id=WP_001285165.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 6277 7566 . + . ID=gene-CCO56_RS22765;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CCO56_RS22765;old_locus_tag=CCO56_22750 NZ_NPMB01000018.1 Protein Homology CDS 6277 7566 . + 0 ID=cds-WP_023229223.1;Parent=gene-CCO56_RS22765;Dbxref=GenBank:WP_023229223.1;Name=WP_023229223.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=CCO56_RS22765;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_023229223.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 7588 8964 . + . ID=gene-CCO56_RS22770;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=CCO56_RS22770;old_locus_tag=CCO56_22755 NZ_NPMB01000018.1 Protein Homology CDS 7588 8964 . + 0 ID=cds-WP_000691374.1;Parent=gene-CCO56_RS22770;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=CCO56_RS22770;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 9106 9519 . + . ID=gene-CCO56_RS22775;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CCO56_RS22775;old_locus_tag=CCO56_22760 NZ_NPMB01000018.1 Protein Homology CDS 9106 9519 . + 0 ID=cds-WP_000008119.1;Parent=gene-CCO56_RS22775;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=CCO56_RS22775;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_NPMB01000018.1 RefSeq pseudogene 9521 9724 . - . ID=gene-CCO56_RS22780;Name=CCO56_RS22780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS22780;old_locus_tag=CCO56_22765;partial=true;pseudo=true;start_range=.,9521 NZ_NPMB01000018.1 Protein Homology CDS 9521 9724 . - 0 ID=cds-CCO56_RS22780;Parent=gene-CCO56_RS22780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=CCO56_RS22780;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;start_range=.,9521;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 9782 10207 . - . ID=gene-CCO56_RS22785;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=CCO56_RS22785;old_locus_tag=CCO56_22770 NZ_NPMB01000018.1 Protein Homology CDS 9782 10207 . - 0 ID=cds-WP_000285585.1;Parent=gene-CCO56_RS22785;Dbxref=GenBank:WP_000285585.1;Name=WP_000285585.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=CCO56_RS22785;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285585.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 10218 10586 . - . ID=gene-CCO56_RS22790;Name=CCO56_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22790;old_locus_tag=CCO56_22775 NZ_NPMB01000018.1 Protein Homology CDS 10218 10586 . - 0 ID=cds-WP_000266518.1;Parent=gene-CCO56_RS22790;Dbxref=GenBank:WP_000266518.1;Name=WP_000266518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=CCO56_RS22790;product=DUF1992 domain-containing protein;protein_id=WP_000266518.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 10694 11077 . - . ID=gene-CCO56_RS22795;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CCO56_RS22795;old_locus_tag=CCO56_22780 NZ_NPMB01000018.1 Protein Homology CDS 10694 11077 . - 0 ID=cds-WP_001216370.1;Parent=gene-CCO56_RS22795;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=CCO56_RS22795;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 11118 12107 . - . ID=gene-CCO56_RS22800;Name=CCO56_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22800;old_locus_tag=CCO56_22785 NZ_NPMB01000018.1 Protein Homology CDS 11118 12107 . - 0 ID=cds-WP_001162094.1;Parent=gene-CCO56_RS22800;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=CCO56_RS22800;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 12133 12753 . - . ID=gene-CCO56_RS22805;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CCO56_RS22805;old_locus_tag=CCO56_22790 NZ_NPMB01000018.1 Protein Homology CDS 12133 12753 . - 0 ID=cds-WP_000135226.1;Parent=gene-CCO56_RS22805;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=CCO56_RS22805;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 12787 13176 . - . ID=gene-CCO56_RS22810;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CCO56_RS22810;old_locus_tag=CCO56_22795 NZ_NPMB01000018.1 Protein Homology CDS 12787 13176 . - 0 ID=cds-WP_001029758.1;Parent=gene-CCO56_RS22810;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=CCO56_RS22810;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 13193 13549 . - . ID=gene-CCO56_RS22815;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CCO56_RS22815;old_locus_tag=CCO56_22800 NZ_NPMB01000018.1 Protein Homology CDS 13193 13549 . - 0 ID=cds-WP_000090780.1;Parent=gene-CCO56_RS22815;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=CCO56_RS22815;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 13696 13812 . - . ID=gene-CCO56_RS22820;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CCO56_RS22820;old_locus_tag=CCO56_22805 NZ_NPMB01000018.1 Protein Homology CDS 13696 13812 . - 0 ID=cds-WP_000868187.1;Parent=gene-CCO56_RS22820;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=CCO56_RS22820;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 13844 15175 . - . ID=gene-CCO56_RS22825;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CCO56_RS22825;old_locus_tag=CCO56_22810 NZ_NPMB01000018.1 Protein Homology CDS 13844 15175 . - 0 ID=cds-WP_001118864.1;Parent=gene-CCO56_RS22825;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=CCO56_RS22825;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 15183 15617 . - . ID=gene-CCO56_RS22830;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CCO56_RS22830;old_locus_tag=CCO56_22815 NZ_NPMB01000018.1 Protein Homology CDS 15183 15617 . - 0 ID=cds-WP_001238917.1;Parent=gene-CCO56_RS22830;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=CCO56_RS22830;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 15621 15800 . - . ID=gene-CCO56_RS22835;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CCO56_RS22835;old_locus_tag=CCO56_22820 NZ_NPMB01000018.1 Protein Homology CDS 15621 15800 . - 0 ID=cds-WP_001140434.1;Parent=gene-CCO56_RS22835;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=CCO56_RS22835;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 15804 16307 . - . ID=gene-CCO56_RS22840;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CCO56_RS22840;old_locus_tag=CCO56_22825 NZ_NPMB01000018.1 Protein Homology CDS 15804 16307 . - 0 ID=cds-WP_000940121.1;Parent=gene-CCO56_RS22840;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=CCO56_RS22840;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 16322 16675 . - . ID=gene-CCO56_RS22845;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CCO56_RS22845;old_locus_tag=CCO56_22830 NZ_NPMB01000018.1 Protein Homology CDS 16322 16675 . - 0 ID=cds-WP_000358956.1;Parent=gene-CCO56_RS22845;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=CCO56_RS22845;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 16685 17218 . - . ID=gene-CCO56_RS22850;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CCO56_RS22850;old_locus_tag=CCO56_22835 NZ_NPMB01000018.1 Protein Homology CDS 16685 17218 . - 0 ID=cds-WP_000091939.1;Parent=gene-CCO56_RS22850;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=CCO56_RS22850;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 17231 17623 . - . ID=gene-CCO56_RS22855;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CCO56_RS22855;old_locus_tag=CCO56_22840 NZ_NPMB01000018.1 Protein Homology CDS 17231 17623 . - 0 ID=cds-WP_000062611.1;Parent=gene-CCO56_RS22855;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=CCO56_RS22855;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 17657 17962 . - . ID=gene-CCO56_RS22860;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CCO56_RS22860;old_locus_tag=CCO56_22845 NZ_NPMB01000018.1 Protein Homology CDS 17657 17962 . - 0 ID=cds-WP_001118932.1;Parent=gene-CCO56_RS22860;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=CCO56_RS22860;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 17977 18516 . - . ID=gene-CCO56_RS22865;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CCO56_RS22865;old_locus_tag=CCO56_22850 NZ_NPMB01000018.1 Protein Homology CDS 17977 18516 . - 0 ID=cds-WP_001096206.1;Parent=gene-CCO56_RS22865;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=CCO56_RS22865;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 18531 18845 . - . ID=gene-CCO56_RS22870;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CCO56_RS22870;old_locus_tag=CCO56_22855 NZ_NPMB01000018.1 Protein Homology CDS 18531 18845 . - 0 ID=cds-WP_000729185.1;Parent=gene-CCO56_RS22870;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=CCO56_RS22870;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 18856 19227 . - . ID=gene-CCO56_RS22875;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CCO56_RS22875;old_locus_tag=CCO56_22860 NZ_NPMB01000018.1 Protein Homology CDS 18856 19227 . - 0 ID=cds-WP_000613954.1;Parent=gene-CCO56_RS22875;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=CCO56_RS22875;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 19391 19645 . - . ID=gene-CCO56_RS22880;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CCO56_RS22880;old_locus_tag=CCO56_22865 NZ_NPMB01000018.1 Protein Homology CDS 19391 19645 . - 0 ID=cds-WP_000130101.1;Parent=gene-CCO56_RS22880;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=CCO56_RS22880;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 19645 19836 . - . ID=gene-CCO56_RS22885;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CCO56_RS22885;old_locus_tag=CCO56_22870 NZ_NPMB01000018.1 Protein Homology CDS 19645 19836 . - 0 ID=cds-WP_000644742.1;Parent=gene-CCO56_RS22885;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=CCO56_RS22885;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 19836 20246 . - . ID=gene-CCO56_RS22890;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CCO56_RS22890;old_locus_tag=CCO56_22875 NZ_NPMB01000018.1 Protein Homology CDS 19836 20246 . - 0 ID=cds-WP_000941208.1;Parent=gene-CCO56_RS22890;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=CCO56_RS22890;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 20259 20960 . - . ID=gene-CCO56_RS22895;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CCO56_RS22895;old_locus_tag=CCO56_22880 NZ_NPMB01000018.1 Protein Homology CDS 20259 20960 . - 0 ID=cds-WP_000529945.1;Parent=gene-CCO56_RS22895;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=CCO56_RS22895;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 20978 21310 . - . ID=gene-CCO56_RS22900;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CCO56_RS22900;old_locus_tag=CCO56_22885 NZ_NPMB01000018.1 Protein Homology CDS 20978 21310 . - 0 ID=cds-WP_000447529.1;Parent=gene-CCO56_RS22900;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=CCO56_RS22900;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 21325 21603 . - . ID=gene-CCO56_RS22905;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CCO56_RS22905;old_locus_tag=CCO56_22890 NZ_NPMB01000018.1 Protein Homology CDS 21325 21603 . - 0 ID=cds-WP_001138115.1;Parent=gene-CCO56_RS22905;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=CCO56_RS22905;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 21620 22441 . - . ID=gene-CCO56_RS22910;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CCO56_RS22910;old_locus_tag=CCO56_22895 NZ_NPMB01000018.1 Protein Homology CDS 21620 22441 . - 0 ID=cds-WP_000301869.1;Parent=gene-CCO56_RS22910;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=CCO56_RS22910;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 22459 22761 . - . ID=gene-CCO56_RS22915;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CCO56_RS22915;old_locus_tag=CCO56_22900 NZ_NPMB01000018.1 Protein Homology CDS 22459 22761 . - 0 ID=cds-WP_000617546.1;Parent=gene-CCO56_RS22915;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=CCO56_RS22915;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 22758 23363 . - . ID=gene-CCO56_RS22920;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CCO56_RS22920;old_locus_tag=CCO56_22905 NZ_NPMB01000018.1 Protein Homology CDS 22758 23363 . - 0 ID=cds-WP_000424395.1;Parent=gene-CCO56_RS22920;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=CCO56_RS22920;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 23374 24003 . - . ID=gene-CCO56_RS22925;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CCO56_RS22925;old_locus_tag=CCO56_22910 NZ_NPMB01000018.1 Protein Homology CDS 23374 24003 . - 0 ID=cds-WP_000579838.1;Parent=gene-CCO56_RS22925;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=CCO56_RS22925;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 24036 24347 . - . ID=gene-CCO56_RS22930;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CCO56_RS22930;old_locus_tag=CCO56_22915 NZ_NPMB01000018.1 Protein Homology CDS 24036 24347 . - 0 ID=cds-WP_001181005.1;Parent=gene-CCO56_RS22930;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=CCO56_RS22930;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 24727 25194 . + . ID=gene-CCO56_RS22940;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=CCO56_RS22940;old_locus_tag=CCO56_22925 NZ_NPMB01000018.1 Protein Homology CDS 24727 25194 . + 0 ID=cds-WP_000495847.1;Parent=gene-CCO56_RS22940;Dbxref=GenBank:WP_000495847.1;Name=WP_000495847.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=CCO56_RS22940;product=prepilin peptidase;protein_id=WP_000495847.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 25191 25667 . - . ID=gene-CCO56_RS22945;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=CCO56_RS22945;old_locus_tag=CCO56_22930 NZ_NPMB01000018.1 Protein Homology CDS 25191 25667 . - 0 ID=cds-WP_000675530.1;Parent=gene-CCO56_RS22945;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=CCO56_RS22945;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_NPMB01000018.1 RefSeq gene 25740 25934 . - . ID=gene-CCO56_RS22950;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=CCO56_RS22950;old_locus_tag=CCO56_22935 NZ_NPMB01000018.1 Protein Homology CDS 25740 25934 . - 0 ID=cds-WP_000289082.1;Parent=gene-CCO56_RS22950;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=CCO56_RS22950;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11 NZ_NPMB01000018.1 RefSeq pseudogene 26119 26252 . - . ID=gene-CCO56_RS22965;Name=tuf;end_range=26252,.;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=CCO56_RS22965;old_locus_tag=CCO56_22950;partial=true;pseudo=true NZ_NPMB01000018.1 Protein Homology CDS 26119 26252 . - 2 ID=cds-CCO56_RS22965;Parent=gene-CCO56_RS22965;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=26252,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO56_RS22965;partial=true;product=elongation factor Tu;pseudo=true;transl_table=11 ##sequence-region NZ_NPMB01000019.1 1 20046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000019.1 RefSeq region 1 20046 . + . ID=NZ_NPMB01000019.1:1..20046;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000019.1 RefSeq gene 187 471 . - . ID=gene-CCO56_RS22970;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=CCO56_RS22970;old_locus_tag=CCO56_22955 NZ_NPMB01000019.1 Protein Homology CDS 187 471 . - 0 ID=cds-WP_000167332.1;Parent=gene-CCO56_RS22970;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=CCO56_RS22970;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 627 2300 . - . ID=gene-CCO56_RS22975;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CCO56_RS22975;old_locus_tag=CCO56_22960 NZ_NPMB01000019.1 Protein Homology CDS 627 2300 . - 0 ID=cds-WP_000140324.1;Parent=gene-CCO56_RS22975;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=CCO56_RS22975;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 2414 3097 . - . ID=gene-CCO56_RS22980;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CCO56_RS22980;old_locus_tag=CCO56_22965 NZ_NPMB01000019.1 Protein Homology CDS 2414 3097 . - 0 ID=cds-WP_000125007.1;Parent=gene-CCO56_RS22980;Dbxref=GenBank:WP_000125007.1;Name=WP_000125007.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=CCO56_RS22980;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 3270 4031 . - . ID=gene-CCO56_RS22985;Name=CCO56_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS22985;old_locus_tag=CCO56_22970 NZ_NPMB01000019.1 Protein Homology CDS 3270 4031 . - 0 ID=cds-WP_000792301.1;Parent=gene-CCO56_RS22985;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=CCO56_RS22985;product=M48 family metallopeptidase;protein_id=WP_000792301.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 4175 5458 . - . ID=gene-CCO56_RS22990;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CCO56_RS22990;old_locus_tag=CCO56_22975 NZ_NPMB01000019.1 Protein Homology CDS 4175 5458 . - 0 ID=cds-WP_076165866.1;Parent=gene-CCO56_RS22990;Dbxref=GenBank:WP_076165866.1;Name=WP_076165866.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=CCO56_RS22990;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_076165866.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 5529 6617 . - . ID=gene-CCO56_RS22995;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=CCO56_RS22995;old_locus_tag=CCO56_22980 NZ_NPMB01000019.1 Protein Homology CDS 5529 6617 . - 0 ID=cds-WP_000079590.1;Parent=gene-CCO56_RS22995;Dbxref=GenBank:WP_000079590.1;Name=WP_000079590.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=CCO56_RS22995;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000079590.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 6803 7495 . - . ID=gene-CCO56_RS23000;Name=CCO56_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23000;old_locus_tag=CCO56_22985 NZ_NPMB01000019.1 Protein Homology CDS 6803 7495 . - 0 ID=cds-WP_000642868.1;Parent=gene-CCO56_RS23000;Dbxref=GenBank:WP_000642868.1;Name=WP_000642868.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=CCO56_RS23000;product=DUF421 domain-containing protein;protein_id=WP_000642868.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 7632 9392 . + . ID=gene-CCO56_RS23005;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=CCO56_RS23005;old_locus_tag=CCO56_22990 NZ_NPMB01000019.1 Protein Homology CDS 7632 9392 . + 0 ID=cds-WP_058215241.1;Parent=gene-CCO56_RS23005;Dbxref=GenBank:WP_058215241.1;Name=WP_058215241.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=CCO56_RS23005;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_058215241.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 9797 10654 . + . ID=gene-CCO56_RS23010;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=CCO56_RS23010;old_locus_tag=CCO56_22995 NZ_NPMB01000019.1 Protein Homology CDS 9797 10654 . + 0 ID=cds-WP_000642539.1;Parent=gene-CCO56_RS23010;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=CCO56_RS23010;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 10714 12996 . + . ID=gene-CCO56_RS23015;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO56_RS23015;old_locus_tag=CCO56_23000 NZ_NPMB01000019.1 Protein Homology CDS 10714 12996 . + 0 ID=cds-WP_001292803.1;Parent=gene-CCO56_RS23015;Dbxref=GenBank:WP_001292803.1;Name=WP_001292803.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=CCO56_RS23015;product=formate C-acetyltransferase;protein_id=WP_001292803.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 13068 14027 . - . ID=gene-CCO56_RS23020;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=CCO56_RS23020;old_locus_tag=CCO56_23005 NZ_NPMB01000019.1 Protein Homology CDS 13068 14027 . - 0 ID=cds-WP_001643655.1;Parent=gene-CCO56_RS23020;Dbxref=GenBank:WP_001643655.1;Name=WP_001643655.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=CCO56_RS23020;product=type III secretion system effector SopD2;protein_id=WP_001643655.1;transl_table=11 NZ_NPMB01000019.1 RefSeq pseudogene 14158 14484 . + . ID=gene-CCO56_RS23915;Name=CCO56_RS23915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23915;pseudo=true NZ_NPMB01000019.1 Protein Homology CDS 14158 14484 . + 0 ID=cds-CCO56_RS23915;Parent=gene-CCO56_RS23915;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=CCO56_RS23915;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 14603 15400 . + . ID=gene-CCO56_RS23025;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CCO56_RS23025;old_locus_tag=CCO56_23010 NZ_NPMB01000019.1 Protein Homology CDS 14603 15400 . + 0 ID=cds-WP_000067928.1;Parent=gene-CCO56_RS23025;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=CCO56_RS23025;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 15692 17113 . - . ID=gene-CCO56_RS23030;Name=CCO56_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23030;old_locus_tag=CCO56_23015 NZ_NPMB01000019.1 Protein Homology CDS 15692 17113 . - 0 ID=cds-WP_001134264.1;Parent=gene-CCO56_RS23030;Dbxref=GenBank:WP_001134264.1;Name=WP_001134264.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=CCO56_RS23030;product=APC family permease;protein_id=WP_001134264.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 17331 18479 . - . ID=gene-CCO56_RS23035;Name=CCO56_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23035;old_locus_tag=CCO56_23020 NZ_NPMB01000019.1 Protein Homology CDS 17331 18479 . - 0 ID=cds-WP_001643647.1;Parent=gene-CCO56_RS23035;Dbxref=GenBank:WP_001643647.1;Name=WP_001643647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=CCO56_RS23035;product=MFS transporter;protein_id=WP_001643647.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 18829 19692 . - . ID=gene-CCO56_RS23040;Name=CCO56_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23040;old_locus_tag=CCO56_23025 NZ_NPMB01000019.1 Protein Homology CDS 18829 19692 . - 0 ID=cds-WP_000534685.1;Parent=gene-CCO56_RS23040;Dbxref=GenBank:WP_000534685.1;Name=WP_000534685.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=CCO56_RS23040;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534685.1;transl_table=11 NZ_NPMB01000019.1 RefSeq gene 19694 20046 . - . ID=gene-CCO56_RS23045;Name=CCO56_RS23045;end_range=20046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23045;old_locus_tag=CCO56_23030;partial=true NZ_NPMB01000019.1 Protein Homology CDS 19694 20046 . - 2 ID=cds-WP_170872864.1;Parent=gene-CCO56_RS23045;Dbxref=GenBank:WP_170872864.1;Name=WP_170872864.1;end_range=20046,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO56_RS23045;partial=true;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_170872864.1;transl_table=11 ##sequence-region NZ_NPMB01000002.1 1 580917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000002.1 RefSeq region 1 580917 . + . ID=NZ_NPMB01000002.1:1..580917;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000002.1 RefSeq gene 588 1022 . + . ID=gene-CCO56_RS03235;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=CCO56_RS03235;old_locus_tag=CCO56_03235 NZ_NPMB01000002.1 Protein Homology CDS 588 1022 . + 0 ID=cds-WP_001082296.1;Parent=gene-CCO56_RS03235;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=CCO56_RS03235;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 1075 1413 . - . ID=gene-CCO56_RS03240;Name=CCO56_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03240;old_locus_tag=CCO56_03240 NZ_NPMB01000002.1 Protein Homology CDS 1075 1413 . - 0 ID=cds-WP_000159242.1;Parent=gene-CCO56_RS03240;Dbxref=GenBank:WP_000159242.1;Name=WP_000159242.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=CCO56_RS03240;product=SMR family transporter;protein_id=WP_000159242.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 1406 1558 . - . ID=gene-CCO56_RS23995;Name=CCO56_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23995;old_locus_tag=CCO56_03245 NZ_NPMB01000002.1 Protein Homology CDS 1406 1558 . - 0 ID=cds-WP_000089155.1;Parent=gene-CCO56_RS23995;Dbxref=GenBank:WP_000089155.1;Name=WP_000089155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465579.1;locus_tag=CCO56_RS23995;product=hypothetical protein;protein_id=WP_000089155.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 1514 1663 . + . ID=gene-CCO56_RS03250;Name=CCO56_RS03250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS03250;old_locus_tag=CCO56_03250;partial=true;pseudo=true;start_range=.,1514 NZ_NPMB01000002.1 Protein Homology CDS 1514 1663 . + 0 ID=cds-CCO56_RS03250;Parent=gene-CCO56_RS03250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=CCO56_RS03250;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1514;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 1769 2704 . + . ID=gene-CCO56_RS03255;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=CCO56_RS03255;old_locus_tag=CCO56_03255 NZ_NPMB01000002.1 Protein Homology CDS 1769 2704 . + 0 ID=cds-WP_001156210.1;Parent=gene-CCO56_RS03255;Dbxref=GenBank:WP_001156210.1;Name=WP_001156210.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=CCO56_RS03255;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001156210.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 2748 4121 . - . ID=gene-CCO56_RS03260;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=CCO56_RS03260;old_locus_tag=CCO56_03260 NZ_NPMB01000002.1 Protein Homology CDS 2748 4121 . - 0 ID=cds-WP_023232843.1;Parent=gene-CCO56_RS03260;Dbxref=GenBank:WP_023232843.1;Name=WP_023232843.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=CCO56_RS03260;product=ATP-dependent RNA helicase DbpA;protein_id=WP_023232843.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 4150 4332 . - . ID=gene-CCO56_RS24065;Name=CCO56_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24065;old_locus_tag=CCO56_03265 NZ_NPMB01000002.1 Protein Homology CDS 4150 4332 . - 0 ID=cds-WP_001670836.1;Parent=gene-CCO56_RS24065;Dbxref=GenBank:WP_001670836.1;Name=WP_001670836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=CCO56_RS24065;product=hypothetical protein;protein_id=WP_001670836.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 4608 5591 . - . ID=gene-CCO56_RS03270;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=CCO56_RS03270;old_locus_tag=CCO56_03270 NZ_NPMB01000002.1 Protein Homology CDS 4608 5591 . - 0 ID=cds-WP_000387370.1;Parent=gene-CCO56_RS03270;Dbxref=GenBank:WP_000387370.1;Name=WP_000387370.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=CCO56_RS03270;product=zinc transporter ZntB;protein_id=WP_000387370.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 5737 6891 . - . ID=gene-CCO56_RS03275;Name=CCO56_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03275;old_locus_tag=CCO56_03275 NZ_NPMB01000002.1 Protein Homology CDS 5737 6891 . - 0 ID=cds-WP_080177137.1;Parent=gene-CCO56_RS03275;Dbxref=GenBank:WP_080177137.1;Name=WP_080177137.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=CCO56_RS03275;product=methyl-accepting chemotaxis protein;protein_id=WP_080177137.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 7302 7865 . - . ID=gene-CCO56_RS03285;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=CCO56_RS03285;old_locus_tag=CCO56_03285 NZ_NPMB01000002.1 Protein Homology CDS 7302 7865 . - 0 ID=cds-WP_001046799.1;Parent=gene-CCO56_RS03285;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=CCO56_RS03285;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 8123 8638 . + . ID=gene-CCO56_RS03290;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=CCO56_RS03290;old_locus_tag=CCO56_03290 NZ_NPMB01000002.1 Protein Homology CDS 8123 8638 . + 0 ID=cds-WP_000945034.1;Parent=gene-CCO56_RS03290;Dbxref=GenBank:WP_000945034.1;Name=WP_000945034.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=CCO56_RS03290;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945034.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 8834 9586 . + . ID=gene-CCO56_RS03295;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=CCO56_RS03295;old_locus_tag=CCO56_03295 NZ_NPMB01000002.1 Protein Homology CDS 8834 9586 . + 0 ID=cds-WP_000611914.1;Parent=gene-CCO56_RS03295;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=CCO56_RS03295;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 9737 10684 . + . ID=gene-CCO56_RS03300;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=CCO56_RS03300;old_locus_tag=CCO56_03300 NZ_NPMB01000002.1 Protein Homology CDS 9737 10684 . + 0 ID=cds-WP_001262138.1;Parent=gene-CCO56_RS03300;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=CCO56_RS03300;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 10739 10993 . - . ID=gene-CCO56_RS03305;Name=CCO56_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03305;old_locus_tag=CCO56_03305 NZ_NPMB01000002.1 Protein Homology CDS 10739 10993 . - 0 ID=cds-WP_000605645.1;Parent=gene-CCO56_RS03305;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=CCO56_RS03305;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 11232 12263 . + . ID=gene-CCO56_RS03310;Name=CCO56_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03310;old_locus_tag=CCO56_03310 NZ_NPMB01000002.1 Protein Homology CDS 11232 12263 . + 0 ID=cds-WP_000493665.1;Parent=gene-CCO56_RS03310;Dbxref=GenBank:WP_000493665.1;Name=WP_000493665.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=CCO56_RS03310;product=mechanosensitive ion channel family protein;protein_id=WP_000493665.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 12345 12947 . - . ID=gene-CCO56_RS03315;Name=CCO56_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03315;old_locus_tag=CCO56_03315 NZ_NPMB01000002.1 Protein Homology CDS 12345 12947 . - 0 ID=cds-WP_000163371.1;Parent=gene-CCO56_RS03315;Dbxref=GenBank:WP_000163371.1;Name=WP_000163371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=CCO56_RS03315;product=helix-turn-helix domain-containing protein;protein_id=WP_000163371.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 12991 13677 . + . ID=gene-CCO56_RS03320;Name=CCO56_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03320;old_locus_tag=CCO56_03320 NZ_NPMB01000002.1 Protein Homology CDS 12991 13677 . + 0 ID=cds-WP_000097255.1;Parent=gene-CCO56_RS03320;Dbxref=GenBank:WP_000097255.1;Name=WP_000097255.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=CCO56_RS03320;product=B3/B4 domain-containing protein;protein_id=WP_000097255.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 13705 14043 . + . ID=gene-CCO56_RS03325;Name=CCO56_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03325;old_locus_tag=CCO56_03325 NZ_NPMB01000002.1 Protein Homology CDS 13705 14043 . + 0 ID=cds-WP_000051812.1;Parent=gene-CCO56_RS03325;Dbxref=GenBank:WP_000051812.1;Name=WP_000051812.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=CCO56_RS03325;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_000051812.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 14150 14707 . - . ID=gene-CCO56_RS03330;Name=CCO56_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03330;old_locus_tag=CCO56_03330 NZ_NPMB01000002.1 Protein Homology CDS 14150 14707 . - 0 ID=cds-WP_001062620.1;Parent=gene-CCO56_RS03330;Dbxref=GenBank:WP_001062620.1;Name=WP_001062620.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=CCO56_RS03330;product=redoxin family protein;protein_id=WP_001062620.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 14803 15627 . - . ID=gene-CCO56_RS03335;Name=CCO56_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03335;old_locus_tag=CCO56_03335 NZ_NPMB01000002.1 Protein Homology CDS 14803 15627 . - 0 ID=cds-WP_001527813.1;Parent=gene-CCO56_RS03335;Dbxref=GenBank:WP_001527813.1;Name=WP_001527813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666973.1;locus_tag=CCO56_RS03335;product=ZirS family two-partner secretion-like system exoprotein;protein_id=WP_001527813.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 15654 17636 . - . ID=gene-CCO56_RS03340;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=CCO56_RS03340;old_locus_tag=CCO56_03340 NZ_NPMB01000002.1 Protein Homology CDS 15654 17636 . - 0 ID=cds-WP_023214955.1;Parent=gene-CCO56_RS03340;Dbxref=GenBank:WP_023214955.1;Name=WP_023214955.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=CCO56_RS03340;product=two-partner secretion translocator ZirT;protein_id=WP_023214955.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 17711 18556 . - . ID=gene-CCO56_RS03345;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=CCO56_RS03345;old_locus_tag=CCO56_03345 NZ_NPMB01000002.1 Protein Homology CDS 17711 18556 . - 0 ID=cds-WP_023214954.1;Parent=gene-CCO56_RS03345;Dbxref=GenBank:WP_023214954.1;Name=WP_023214954.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=CCO56_RS03345;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_023214954.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 18848 19705 . + . ID=gene-CCO56_RS03350;Name=CCO56_RS03350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS03350;old_locus_tag=CCO56_03350;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 18848 19705 . + 0 ID=cds-CCO56_RS03350;Parent=gene-CCO56_RS03350;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=CCO56_RS03350;product=GyrI-like domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 20095 21204 . + . ID=gene-CCO56_RS03355;Name=CCO56_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03355;old_locus_tag=CCO56_03355 NZ_NPMB01000002.1 Protein Homology CDS 20095 21204 . + 0 ID=cds-WP_080177135.1;Parent=gene-CCO56_RS03355;Dbxref=GenBank:WP_080177135.1;Name=WP_080177135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=CCO56_RS03355;product=hypothetical protein;protein_id=WP_080177135.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 21418 21654 . - . ID=gene-CCO56_RS03360;Name=CCO56_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03360;old_locus_tag=CCO56_03360 NZ_NPMB01000002.1 Protein Homology CDS 21418 21654 . - 0 ID=cds-WP_001168017.1;Parent=gene-CCO56_RS03360;Dbxref=GenBank:WP_001168017.1;Name=WP_001168017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=CCO56_RS03360;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168017.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 21783 22373 . - . ID=gene-CCO56_RS03365;Name=CCO56_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03365;old_locus_tag=CCO56_03365 NZ_NPMB01000002.1 Protein Homology CDS 21783 22373 . - 0 ID=cds-WP_000208476.1;Parent=gene-CCO56_RS03365;Dbxref=GenBank:WP_000208476.1;Name=WP_000208476.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=CCO56_RS03365;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208476.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 22451 23164 . + . ID=gene-CCO56_RS03370;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=CCO56_RS03370;old_locus_tag=CCO56_03370 NZ_NPMB01000002.1 Protein Homology CDS 22451 23164 . + 0 ID=cds-WP_000979084.1;Parent=gene-CCO56_RS03370;Dbxref=GenBank:WP_000979084.1;Name=WP_000979084.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=CCO56_RS03370;product=SDR family oxidoreductase;protein_id=WP_000979084.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 23255 24124 . - . ID=gene-CCO56_RS03375;Name=CCO56_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03375;old_locus_tag=CCO56_03375 NZ_NPMB01000002.1 Protein Homology CDS 23255 24124 . - 0 ID=cds-WP_000456775.1;Parent=gene-CCO56_RS03375;Dbxref=GenBank:WP_000456775.1;Name=WP_000456775.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=CCO56_RS03375;product=aldo/keto reductase;protein_id=WP_000456775.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 24400 25305 . - . ID=gene-CCO56_RS03380;Name=CCO56_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03380;old_locus_tag=CCO56_03380 NZ_NPMB01000002.1 Protein Homology CDS 24400 25305 . - 0 ID=cds-WP_080177134.1;Parent=gene-CCO56_RS03380;Dbxref=GenBank:WP_080177134.1;Name=WP_080177134.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=CCO56_RS03380;product=LysR family transcriptional regulator;protein_id=WP_080177134.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 25424 26353 . + . ID=gene-CCO56_RS03385;Name=CCO56_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03385;old_locus_tag=CCO56_03385 NZ_NPMB01000002.1 Protein Homology CDS 25424 26353 . + 0 ID=cds-WP_080177133.1;Parent=gene-CCO56_RS03385;Dbxref=GenBank:WP_080177133.1;Name=WP_080177133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=CCO56_RS03385;product=aromatic alcohol reductase;protein_id=WP_080177133.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 26413 28026 . - . ID=gene-CCO56_RS03390;Name=CCO56_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03390;old_locus_tag=CCO56_03390 NZ_NPMB01000002.1 Protein Homology CDS 26413 28026 . - 0 ID=cds-WP_061377393.1;Parent=gene-CCO56_RS03390;Dbxref=GenBank:WP_061377393.1;Name=WP_061377393.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=CCO56_RS03390;product=peptide ABC transporter substrate-binding protein;protein_id=WP_061377393.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 28216 28944 . + . ID=gene-CCO56_RS03395;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=CCO56_RS03395;old_locus_tag=CCO56_03395 NZ_NPMB01000002.1 Protein Homology CDS 28216 28944 . + 0 ID=cds-WP_000219104.1;Parent=gene-CCO56_RS03395;Dbxref=GenBank:WP_000219104.1;Name=WP_000219104.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=CCO56_RS03395;product=murein tripeptide amidase MpaA;protein_id=WP_000219104.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 28919 29884 . - . ID=gene-CCO56_RS03400;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=CCO56_RS03400;old_locus_tag=CCO56_03400 NZ_NPMB01000002.1 Protein Homology CDS 28919 29884 . - 0 ID=cds-WP_001258076.1;Parent=gene-CCO56_RS03400;Dbxref=GenBank:WP_001258076.1;Name=WP_001258076.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=CCO56_RS03400;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258076.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 30000 30506 . + . ID=gene-CCO56_RS03405;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CCO56_RS03405;old_locus_tag=CCO56_03405 NZ_NPMB01000002.1 Protein Homology CDS 30000 30506 . + 0 ID=cds-WP_001629346.1;Parent=gene-CCO56_RS03405;Dbxref=GenBank:WP_001629346.1;Name=WP_001629346.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=CCO56_RS03405;product=thiol peroxidase;protein_id=WP_001629346.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 30596 32137 . - . ID=gene-CCO56_RS03410;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=CCO56_RS03410;old_locus_tag=CCO56_03410 NZ_NPMB01000002.1 Protein Homology CDS 30596 32137 . - 0 ID=cds-WP_001235493.1;Parent=gene-CCO56_RS03410;Dbxref=GenBank:WP_001235493.1;Name=WP_001235493.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=CCO56_RS03410;product=transcriptional regulator TyrR;protein_id=WP_001235493.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 32285 33346 . - . ID=gene-CCO56_RS03415;Name=CCO56_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03415;old_locus_tag=CCO56_03415 NZ_NPMB01000002.1 Protein Homology CDS 32285 33346 . - 0 ID=cds-WP_001294472.1;Parent=gene-CCO56_RS03415;Dbxref=GenBank:WP_001294472.1;Name=WP_001294472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=CCO56_RS03415;product=TIGR01620 family protein;protein_id=WP_001294472.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 33343 34740 . - . ID=gene-CCO56_RS03420;Name=CCO56_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03420;old_locus_tag=CCO56_03420 NZ_NPMB01000002.1 Protein Homology CDS 33343 34740 . - 0 ID=cds-WP_157958299.1;Parent=gene-CCO56_RS03420;Dbxref=GenBank:WP_157958299.1;Name=WP_157958299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=CCO56_RS03420;product=YcjX family protein;protein_id=WP_157958299.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 34889 35203 . - . ID=gene-CCO56_RS03425;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=CCO56_RS03425;old_locus_tag=CCO56_03425 NZ_NPMB01000002.1 Protein Homology CDS 34889 35203 . - 0 ID=cds-WP_000913432.1;Parent=gene-CCO56_RS03425;Dbxref=GenBank:WP_000913432.1;Name=WP_000913432.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=CCO56_RS03425;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913432.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 35279 35497 . - . ID=gene-CCO56_RS03430;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=CCO56_RS03430;old_locus_tag=CCO56_03430 NZ_NPMB01000002.1 Protein Homology CDS 35279 35497 . - 0 ID=cds-WP_001097607.1;Parent=gene-CCO56_RS03430;Dbxref=GenBank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=CCO56_RS03430;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 35520 35879 . - . ID=gene-CCO56_RS03435;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=CCO56_RS03435;old_locus_tag=CCO56_03435 NZ_NPMB01000002.1 Protein Homology CDS 35520 35879 . - 0 ID=cds-WP_000508941.1;Parent=gene-CCO56_RS03435;Dbxref=GenBank:WP_000508941.1;Name=WP_000508941.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=CCO56_RS03435;product=envelope stress response membrane protein PspC;protein_id=WP_000508941.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 35879 36103 . - . ID=gene-CCO56_RS03440;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=CCO56_RS03440;old_locus_tag=CCO56_03440 NZ_NPMB01000002.1 Protein Homology CDS 35879 36103 . - 0 ID=cds-WP_001274953.1;Parent=gene-CCO56_RS03440;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=CCO56_RS03440;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 36163 36831 . - . ID=gene-CCO56_RS03445;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=CCO56_RS03445;old_locus_tag=CCO56_03445 NZ_NPMB01000002.1 Protein Homology CDS 36163 36831 . - 0 ID=cds-WP_000511000.1;Parent=gene-CCO56_RS03445;Dbxref=GenBank:WP_000511000.1;Name=WP_000511000.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=CCO56_RS03445;product=phage shock protein PspA;protein_id=WP_000511000.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 37002 37982 . + . ID=gene-CCO56_RS03450;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=CCO56_RS03450;old_locus_tag=CCO56_03450 NZ_NPMB01000002.1 Protein Homology CDS 37002 37982 . + 0 ID=cds-WP_001543112.1;Parent=gene-CCO56_RS03450;Dbxref=GenBank:WP_001543112.1;Name=WP_001543112.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=CCO56_RS03450;product=phage shock protein operon transcriptional activator;protein_id=WP_001543112.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 38094 39743 . + . ID=gene-CCO56_RS03455;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=CCO56_RS03455;old_locus_tag=CCO56_03455 NZ_NPMB01000002.1 Protein Homology CDS 38094 39743 . + 0 ID=cds-WP_001241628.1;Parent=gene-CCO56_RS03455;Dbxref=GenBank:WP_001241628.1;Name=WP_001241628.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=CCO56_RS03455;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241628.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 39740 40705 . + . ID=gene-CCO56_RS03460;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=CCO56_RS03460;old_locus_tag=CCO56_03460 NZ_NPMB01000002.1 Protein Homology CDS 39740 40705 . + 0 ID=cds-WP_000583298.1;Parent=gene-CCO56_RS03460;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=CCO56_RS03460;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 40936 41238 . - . ID=gene-CCO56_RS03465;Name=CCO56_RS03465;end_range=41238,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS03465;old_locus_tag=CCO56_03465;partial=true;pseudo=true;start_range=.,40936 NZ_NPMB01000002.1 Protein Homology CDS 40936 41238 . - 0 ID=cds-CCO56_RS03465;Parent=gene-CCO56_RS03465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;end_range=41238,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461630.1;locus_tag=CCO56_RS03465;partial=true;product=recombinase family protein;pseudo=true;start_range=.,40936;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 41397 41567 . - . ID=gene-CCO56_RS24070;Name=CCO56_RS24070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24070;partial=true;pseudo=true;start_range=.,41397 NZ_NPMB01000002.1 Protein Homology CDS 41397 41567 . - 0 ID=cds-CCO56_RS24070;Parent=gene-CCO56_RS24070;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406273.1;locus_tag=CCO56_RS24070;partial=true;product=putative holin;pseudo=true;start_range=.,41397;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 41626 42051 . - . ID=gene-CCO56_RS03475;Name=CCO56_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03475;old_locus_tag=CCO56_03475 NZ_NPMB01000002.1 Protein Homology CDS 41626 42051 . - 0 ID=cds-WP_000727928.1;Parent=gene-CCO56_RS03475;Dbxref=GenBank:WP_000727928.1;Name=WP_000727928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727929.1;locus_tag=CCO56_RS03475;product=subtilase family AB5 toxin binding subunit;protein_id=WP_000727928.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 42071 42574 . - . ID=gene-CCO56_RS23655;Name=CCO56_RS23655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23655;partial=true;pseudo=true;start_range=.,42071 NZ_NPMB01000002.1 Protein Homology CDS 42071 42574 . - 0 ID=cds-CCO56_RS23655;Parent=gene-CCO56_RS23655;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_156015302.1;locus_tag=CCO56_RS23655;partial=true;product=pertussis toxin-like subunit ArtA;pseudo=true;start_range=.,42071;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 42706 42888 . - . ID=gene-CCO56_RS03490;Name=CCO56_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03490;old_locus_tag=CCO56_03490 NZ_NPMB01000002.1 Protein Homology CDS 42706 42888 . - 0 ID=cds-WP_001096568.1;Parent=gene-CCO56_RS03490;Dbxref=GenBank:WP_001096568.1;Name=WP_001096568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096568.1;locus_tag=CCO56_RS03490;product=recombination protein NinG;protein_id=WP_001096568.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 43359 44081 . + . ID=gene-CCO56_RS03495;Name=CCO56_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03495;old_locus_tag=CCO56_03495 NZ_NPMB01000002.1 GeneMarkS-2+ CDS 43359 44081 . + 0 ID=cds-WP_001605114.1;Parent=gene-CCO56_RS03495;Dbxref=GenBank:WP_001605114.1;Name=WP_001605114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS03495;product=hypothetical protein;protein_id=WP_001605114.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 44415 44769 . - . ID=gene-CCO56_RS03500;Name=CCO56_RS03500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS03500;old_locus_tag=CCO56_03500;partial=true;pseudo=true;start_range=.,44415 NZ_NPMB01000002.1 Protein Homology CDS 44415 44769 . - 0 ID=cds-CCO56_RS03500;Parent=gene-CCO56_RS03500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542039.1;locus_tag=CCO56_RS03500;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,44415;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 44904 45794 . + . ID=gene-CCO56_RS03505;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=CCO56_RS03505;old_locus_tag=CCO56_03505 NZ_NPMB01000002.1 Protein Homology CDS 44904 45794 . + 0 ID=cds-WP_001146139.1;Parent=gene-CCO56_RS03505;Dbxref=GenBank:WP_001146139.1;Name=WP_001146139.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=CCO56_RS03505;product=peptide ABC transporter permease SapC;protein_id=WP_001146139.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 45794 46786 . + . ID=gene-CCO56_RS03510;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=CCO56_RS03510;old_locus_tag=CCO56_03510 NZ_NPMB01000002.1 Protein Homology CDS 45794 46786 . + 0 ID=cds-WP_053258843.1;Parent=gene-CCO56_RS03510;Dbxref=GenBank:WP_053258843.1;Name=WP_053258843.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=CCO56_RS03510;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_053258843.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 46788 47594 . + . ID=gene-CCO56_RS03515;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=CCO56_RS03515;old_locus_tag=CCO56_03515 NZ_NPMB01000002.1 Protein Homology CDS 46788 47594 . + 0 ID=cds-WP_000230462.1;Parent=gene-CCO56_RS03515;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=CCO56_RS03515;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 47610 48317 . - . ID=gene-CCO56_RS03520;Name=CCO56_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03520;old_locus_tag=CCO56_03520 NZ_NPMB01000002.1 Protein Homology CDS 47610 48317 . - 0 ID=cds-WP_061377764.1;Parent=gene-CCO56_RS03520;Dbxref=GenBank:WP_061377764.1;Name=WP_061377764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=CCO56_RS03520;product=EAL domain-containing protein;protein_id=WP_061377764.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 48783 50156 . - . ID=gene-CCO56_RS03525;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=CCO56_RS03525;old_locus_tag=CCO56_03525 NZ_NPMB01000002.1 Protein Homology CDS 48783 50156 . - 0 ID=cds-WP_053258845.1;Parent=gene-CCO56_RS03525;Dbxref=GenBank:WP_053258845.1;Name=WP_053258845.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=CCO56_RS03525;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_053258845.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 50191 50331 . + . ID=gene-CCO56_RS03530;Name=CCO56_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03530;old_locus_tag=CCO56_03530 NZ_NPMB01000002.1 Protein Homology CDS 50191 50331 . + 0 ID=cds-WP_043942882.1;Parent=gene-CCO56_RS03530;Dbxref=GenBank:WP_043942882.1;Name=WP_043942882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=CCO56_RS03530;product=hypothetical protein;protein_id=WP_043942882.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 50345 50645 . + . ID=gene-CCO56_RS03535;Name=CCO56_RS03535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS03535;old_locus_tag=CCO56_03535;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 50345 50645 . + 0 ID=cds-CCO56_RS03535;Parent=gene-CCO56_RS03535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=CCO56_RS03535;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 50763 51551 . + . ID=gene-CCO56_RS03540;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CCO56_RS03540;old_locus_tag=CCO56_03540 NZ_NPMB01000002.1 Protein Homology CDS 50763 51551 . + 0 ID=cds-WP_000506501.1;Parent=gene-CCO56_RS03540;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=CCO56_RS03540;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 51751 52746 . + . ID=gene-CCO56_RS03545;Name=CCO56_RS03545;end_range=52746,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS03545;old_locus_tag=CCO56_03545;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 51751 52746 . + 0 ID=cds-CCO56_RS03545;Parent=gene-CCO56_RS03545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=52746,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=CCO56_RS03545;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 52991 54925 . + . ID=gene-CCO56_RS03550;Name=CCO56_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03550;old_locus_tag=CCO56_03550 NZ_NPMB01000002.1 Protein Homology CDS 52991 54925 . + 0 ID=cds-WP_061377765.1;Parent=gene-CCO56_RS03550;Dbxref=GenBank:WP_061377765.1;Name=WP_061377765.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=CCO56_RS03550;product=exoribonuclease II;protein_id=WP_061377765.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 55187 57169 . + . ID=gene-CCO56_RS03560;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=CCO56_RS03560;old_locus_tag=CCO56_03560 NZ_NPMB01000002.1 Protein Homology CDS 55187 57169 . + 0 ID=cds-WP_000977609.1;Parent=gene-CCO56_RS03560;Dbxref=GenBank:WP_000977609.1;Name=WP_000977609.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=CCO56_RS03560;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000977609.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 57291 57470 . + . ID=gene-CCO56_RS03565;Name=CCO56_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03565;old_locus_tag=CCO56_03565 NZ_NPMB01000002.1 Protein Homology CDS 57291 57470 . + 0 ID=cds-WP_001279854.1;Parent=gene-CCO56_RS03565;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=CCO56_RS03565;product=hypothetical protein;protein_id=WP_001279854.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 57557 58309 . + . ID=gene-CCO56_RS03570;Name=CCO56_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03570;old_locus_tag=CCO56_03570 NZ_NPMB01000002.1 Protein Homology CDS 57557 58309 . + 0 ID=cds-WP_001088593.1;Parent=gene-CCO56_RS03570;Dbxref=GenBank:WP_001088593.1;Name=WP_001088593.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=CCO56_RS03570;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088593.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 58568 58786 . + . ID=gene-CCO56_RS03575;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=CCO56_RS03575;old_locus_tag=CCO56_03575 NZ_NPMB01000002.1 Protein Homology CDS 58568 58786 . + 0 ID=cds-WP_000481166.1;Parent=gene-CCO56_RS03575;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=CCO56_RS03575;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 58906 59232 . - . ID=gene-CCO56_RS03580;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=CCO56_RS03580;old_locus_tag=CCO56_03580 NZ_NPMB01000002.1 Protein Homology CDS 58906 59232 . - 0 ID=cds-WP_001285203.1;Parent=gene-CCO56_RS03580;Dbxref=GenBank:WP_001285203.1;Name=WP_001285203.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=CCO56_RS03580;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285203.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 59232 59969 . - . ID=gene-CCO56_RS03585;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CCO56_RS03585;old_locus_tag=CCO56_03585 NZ_NPMB01000002.1 Protein Homology CDS 59232 59969 . - 0 ID=cds-WP_072275069.1;Parent=gene-CCO56_RS03585;Dbxref=GenBank:WP_072275069.1;Name=WP_072275069.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=CCO56_RS03585;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_072275069.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 60160 61329 . - . ID=gene-CCO56_RS03590;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=CCO56_RS03590;old_locus_tag=CCO56_03590 NZ_NPMB01000002.1 Protein Homology CDS 60160 61329 . - 0 ID=cds-WP_000891378.1;Parent=gene-CCO56_RS03590;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=CCO56_RS03590;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 61336 61644 . - . ID=gene-CCO56_RS03595;Name=CCO56_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03595;old_locus_tag=CCO56_03595 NZ_NPMB01000002.1 Protein Homology CDS 61336 61644 . - 0 ID=cds-WP_000876301.1;Parent=gene-CCO56_RS03595;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=CCO56_RS03595;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 61794 62558 . - . ID=gene-CCO56_RS03605;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=CCO56_RS03605;old_locus_tag=CCO56_03605 NZ_NPMB01000002.1 Protein Homology CDS 61794 62558 . - 0 ID=cds-WP_000948636.1;Parent=gene-CCO56_RS03605;Dbxref=GenBank:WP_000948636.1;Name=WP_000948636.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=CCO56_RS03605;product=phosphatidylglycerophosphatase B;protein_id=WP_000948636.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 62754 63344 . + . ID=gene-CCO56_RS03610;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=CCO56_RS03610;old_locus_tag=CCO56_03610 NZ_NPMB01000002.1 Protein Homology CDS 62754 63344 . + 0 ID=cds-WP_001176283.1;Parent=gene-CCO56_RS03610;Dbxref=GenBank:WP_001176283.1;Name=WP_001176283.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=CCO56_RS03610;product=GTP cyclohydrolase II;protein_id=WP_001176283.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 63400 66075 . - . ID=gene-CCO56_RS03615;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CCO56_RS03615;old_locus_tag=CCO56_03615 NZ_NPMB01000002.1 Protein Homology CDS 63400 66075 . - 0 ID=cds-WP_023207742.1;Parent=gene-CCO56_RS03615;Dbxref=GenBank:WP_023207742.1;Name=WP_023207742.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=CCO56_RS03615;product=aconitate hydratase AcnA;protein_id=WP_023207742.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 66258 66350 . - . ID=gene-CCO56_RS23660;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=CCO56_RS23660 NZ_NPMB01000002.1 Protein Homology CDS 66258 66350 . - 0 ID=cds-WP_223148964.1;Parent=gene-CCO56_RS23660;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=CCO56_RS23660;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 66460 66630 . - . ID=gene-CCO56_RS03625;Name=CCO56_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03625;old_locus_tag=CCO56_03625 NZ_NPMB01000002.1 Protein Homology CDS 66460 66630 . - 0 ID=cds-WP_000029025.1;Parent=gene-CCO56_RS03625;Dbxref=GenBank:WP_000029025.1;Name=WP_000029025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=CCO56_RS03625;product=hypothetical protein;protein_id=WP_000029025.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 66631 66771 . - . ID=gene-CCO56_RS03630;Name=CCO56_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03630;old_locus_tag=CCO56_03630 NZ_NPMB01000002.1 Protein Homology CDS 66631 66771 . - 0 ID=cds-WP_213083417.1;Parent=gene-CCO56_RS03630;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=CCO56_RS03630;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 67052 68026 . - . ID=gene-CCO56_RS03635;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=CCO56_RS03635;old_locus_tag=CCO56_03635 NZ_NPMB01000002.1 Protein Homology CDS 67052 68026 . - 0 ID=cds-WP_000776232.1;Parent=gene-CCO56_RS03635;Dbxref=GenBank:WP_000776232.1;Name=WP_000776232.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=CCO56_RS03635;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776232.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 68430 71027 . - . ID=gene-CCO56_RS03645;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CCO56_RS03645;old_locus_tag=CCO56_03645 NZ_NPMB01000002.1 Protein Homology CDS 68430 71027 . - 0 ID=cds-WP_000513593.1;Parent=gene-CCO56_RS03645;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=CCO56_RS03645;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 71430 71681 . + . ID=gene-CCO56_RS03655;Name=CCO56_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03655;old_locus_tag=CCO56_03655 NZ_NPMB01000002.1 Protein Homology CDS 71430 71681 . + 0 ID=cds-WP_000548616.1;Parent=gene-CCO56_RS03655;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=CCO56_RS03655;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 71723 72769 . - . ID=gene-CCO56_RS03660;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=CCO56_RS03660;old_locus_tag=CCO56_03660 NZ_NPMB01000002.1 Protein Homology CDS 71723 72769 . - 0 ID=cds-WP_000422082.1;Parent=gene-CCO56_RS03660;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=CCO56_RS03660;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 73007 73768 . + . ID=gene-CCO56_RS03665;Name=CCO56_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03665;old_locus_tag=CCO56_03665 NZ_NPMB01000002.1 Protein Homology CDS 73007 73768 . + 0 ID=cds-WP_000559310.1;Parent=gene-CCO56_RS03665;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=CCO56_RS03665;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 73765 74355 . + . ID=gene-CCO56_RS03670;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=CCO56_RS03670;old_locus_tag=CCO56_03670 NZ_NPMB01000002.1 Protein Homology CDS 73765 74355 . + 0 ID=cds-WP_001278862.1;Parent=gene-CCO56_RS03670;Dbxref=GenBank:WP_001278862.1;Name=WP_001278862.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=CCO56_RS03670;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278862.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 74442 75317 . - . ID=gene-CCO56_RS03675;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=CCO56_RS03675;old_locus_tag=CCO56_03675 NZ_NPMB01000002.1 Protein Homology CDS 74442 75317 . - 0 ID=cds-WP_001291233.1;Parent=gene-CCO56_RS03675;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=CCO56_RS03675;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 75418 76038 . - . ID=gene-CCO56_RS03680;Name=CCO56_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03680;old_locus_tag=CCO56_03680 NZ_NPMB01000002.1 Protein Homology CDS 75418 76038 . - 0 ID=cds-WP_000077250.1;Parent=gene-CCO56_RS03680;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=CCO56_RS03680;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 76046 76927 . - . ID=gene-CCO56_RS03685;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=CCO56_RS03685;old_locus_tag=CCO56_03685 NZ_NPMB01000002.1 Protein Homology CDS 76046 76927 . - 0 ID=cds-WP_058344208.1;Parent=gene-CCO56_RS03685;Dbxref=GenBank:WP_058344208.1;Name=WP_058344208.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=CCO56_RS03685;product=RNase RNM;protein_id=WP_058344208.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 77049 77093 . + . ID=gene-CCO56_RS03690;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=CCO56_RS03690;old_locus_tag=CCO56_03690 NZ_NPMB01000002.1 Protein Homology CDS 77049 77093 . + 0 ID=cds-WP_010989026.1;Parent=gene-CCO56_RS03690;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=CCO56_RS03690;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11 NZ_NPMB01000002.1 cmsearch sequence_feature 77070 77165 . + . ID=id-NZ_NPMB01000002.1:77070..77165;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMB01000002.1 RefSeq gene 77188 78750 . + . ID=gene-CCO56_RS03695;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=CCO56_RS03695;old_locus_tag=CCO56_03695 NZ_NPMB01000002.1 Protein Homology CDS 77188 78750 . + 0 ID=cds-WP_001194377.1;Parent=gene-CCO56_RS03695;Dbxref=GenBank:WP_001194377.1;Name=WP_001194377.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=CCO56_RS03695;product=anthranilate synthase component I;protein_id=WP_001194377.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 78750 80345 . + . ID=gene-CCO56_RS03700;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CCO56_RS03700;old_locus_tag=CCO56_03700 NZ_NPMB01000002.1 Protein Homology CDS 78750 80345 . + 0 ID=cds-WP_058344209.1;Parent=gene-CCO56_RS03700;Dbxref=GenBank:WP_058344209.1;Name=WP_058344209.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=CCO56_RS03700;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_058344209.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 80349 81707 . + . ID=gene-CCO56_RS03705;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=CCO56_RS03705;old_locus_tag=CCO56_03705 NZ_NPMB01000002.1 Protein Homology CDS 80349 81707 . + 0 ID=cds-WP_058344210.1;Parent=gene-CCO56_RS03705;Dbxref=GenBank:WP_058344210.1;Name=WP_058344210.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=CCO56_RS03705;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_058344210.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 81717 82910 . + . ID=gene-CCO56_RS03710;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CCO56_RS03710;old_locus_tag=CCO56_03710 NZ_NPMB01000002.1 Protein Homology CDS 81717 82910 . + 0 ID=cds-WP_000209485.1;Parent=gene-CCO56_RS03710;Dbxref=GenBank:WP_000209485.1;Name=WP_000209485.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=CCO56_RS03710;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 82910 83716 . + . ID=gene-CCO56_RS03715;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CCO56_RS03715;old_locus_tag=CCO56_03715 NZ_NPMB01000002.1 Protein Homology CDS 82910 83716 . + 0 ID=cds-WP_000443021.1;Parent=gene-CCO56_RS03715;Dbxref=GenBank:WP_000443021.1;Name=WP_000443021.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=CCO56_RS03715;product=tryptophan synthase subunit alpha;protein_id=WP_000443021.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 84195 84377 . + . ID=gene-CCO56_RS03720;Name=CCO56_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03720;old_locus_tag=CCO56_03720 NZ_NPMB01000002.1 Protein Homology CDS 84195 84377 . + 0 ID=cds-WP_000807657.1;Parent=gene-CCO56_RS03720;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=CCO56_RS03720;product=general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 84467 84970 . + . ID=gene-CCO56_RS03725;Name=CCO56_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03725;old_locus_tag=CCO56_03725 NZ_NPMB01000002.1 Protein Homology CDS 84467 84970 . + 0 ID=cds-WP_080177131.1;Parent=gene-CCO56_RS03725;Dbxref=GenBank:WP_080177131.1;Name=WP_080177131.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=CCO56_RS03725;product=ferritin-like domain-containing protein;protein_id=WP_080177131.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 85044 85550 . + . ID=gene-CCO56_RS03730;Name=CCO56_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03730;old_locus_tag=CCO56_03730 NZ_NPMB01000002.1 Protein Homology CDS 85044 85550 . + 0 ID=cds-WP_001109977.1;Parent=gene-CCO56_RS03730;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=CCO56_RS03730;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 85570 86448 . + . ID=gene-CCO56_RS03735;Name=CCO56_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03735;old_locus_tag=CCO56_03735 NZ_NPMB01000002.1 Protein Homology CDS 85570 86448 . + 0 ID=cds-WP_000488353.1;Parent=gene-CCO56_RS03735;Dbxref=GenBank:WP_000488353.1;Name=WP_000488353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=CCO56_RS03735;product=manganese catalase family protein;protein_id=WP_000488353.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 86530 87168 . - . ID=gene-CCO56_RS03740;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=CCO56_RS03740;old_locus_tag=CCO56_03740 NZ_NPMB01000002.1 Protein Homology CDS 86530 87168 . - 0 ID=cds-WP_000714799.1;Parent=gene-CCO56_RS03740;Dbxref=GenBank:WP_000714799.1;Name=WP_000714799.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=CCO56_RS03740;product=outer membrane protein OmpW;protein_id=WP_000714799.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 87505 87909 . + . ID=gene-CCO56_RS03745;Name=CCO56_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03745;old_locus_tag=CCO56_03745 NZ_NPMB01000002.1 Protein Homology CDS 87505 87909 . + 0 ID=cds-WP_000114955.1;Parent=gene-CCO56_RS03745;Dbxref=GenBank:WP_000114955.1;Name=WP_000114955.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=CCO56_RS03745;product=YkgJ family cysteine cluster protein;protein_id=WP_000114955.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 87935 88678 . + . ID=gene-CCO56_RS03750;Name=CCO56_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03750;old_locus_tag=CCO56_03750 NZ_NPMB01000002.1 Protein Homology CDS 87935 88678 . + 0 ID=cds-WP_000028507.1;Parent=gene-CCO56_RS03750;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=CCO56_RS03750;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 88735 89274 . + . ID=gene-CCO56_RS03755;Name=CCO56_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03755;old_locus_tag=CCO56_03755 NZ_NPMB01000002.1 Protein Homology CDS 88735 89274 . + 0 ID=cds-WP_000808683.1;Parent=gene-CCO56_RS03755;Dbxref=GenBank:WP_000808683.1;Name=WP_000808683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=CCO56_RS03755;product=septation protein A;protein_id=WP_000808683.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 89435 89836 . + . ID=gene-CCO56_RS03760;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=CCO56_RS03760;old_locus_tag=CCO56_03760 NZ_NPMB01000002.1 Protein Homology CDS 89435 89836 . + 0 ID=cds-WP_000210317.1;Parent=gene-CCO56_RS03760;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=CCO56_RS03760;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 89896 90624 . - . ID=gene-CCO56_RS03765;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=CCO56_RS03765;old_locus_tag=CCO56_03765 NZ_NPMB01000002.1 Protein Homology CDS 89896 90624 . - 0 ID=cds-WP_001525247.1;Parent=gene-CCO56_RS03765;Dbxref=GenBank:WP_001525247.1;Name=WP_001525247.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=CCO56_RS03765;product=TonB system transport protein TonB;protein_id=WP_001525247.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 90848 91144 . + . ID=gene-CCO56_RS03770;Name=CCO56_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03770;old_locus_tag=CCO56_03770 NZ_NPMB01000002.1 Protein Homology CDS 90848 91144 . + 0 ID=cds-WP_000967605.1;Parent=gene-CCO56_RS03770;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=CCO56_RS03770;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 91188 91361 . - . ID=gene-CCO56_RS03775;Name=CCO56_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03775;old_locus_tag=CCO56_03775 NZ_NPMB01000002.1 Protein Homology CDS 91188 91361 . - 0 ID=cds-WP_001531561.1;Parent=gene-CCO56_RS03775;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=CCO56_RS03775;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 91504 92964 . + . ID=gene-CCO56_RS03780;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CCO56_RS03780;old_locus_tag=CCO56_03780 NZ_NPMB01000002.1 Protein Homology CDS 91504 92964 . + 0 ID=cds-WP_000206886.1;Parent=gene-CCO56_RS03780;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=CCO56_RS03780;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 92998 93327 . + . ID=gene-CCO56_RS03785;Name=CCO56_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03785;old_locus_tag=CCO56_03785 NZ_NPMB01000002.1 Protein Homology CDS 92998 93327 . + 0 ID=cds-WP_000425070.1;Parent=gene-CCO56_RS03785;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=CCO56_RS03785;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 93375 94211 . - . ID=gene-CCO56_RS03790;Name=CCO56_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03790;old_locus_tag=CCO56_03790 NZ_NPMB01000002.1 Protein Homology CDS 93375 94211 . - 0 ID=cds-WP_080177130.1;Parent=gene-CCO56_RS03790;Dbxref=GenBank:WP_080177130.1;Name=WP_080177130.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=CCO56_RS03790;product=ion transporter;protein_id=WP_080177130.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 94259 95263 . - . ID=gene-CCO56_RS03795;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=CCO56_RS03795;old_locus_tag=CCO56_03795 NZ_NPMB01000002.1 Protein Homology CDS 94259 95263 . - 0 ID=cds-WP_000994698.1;Parent=gene-CCO56_RS03795;Dbxref=GenBank:WP_000994698.1;Name=WP_000994698.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=CCO56_RS03795;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994698.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 95260 96267 . - . ID=gene-CCO56_RS03800;Name=CCO56_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03800;old_locus_tag=CCO56_03800 NZ_NPMB01000002.1 Protein Homology CDS 95260 96267 . - 0 ID=cds-WP_000058861.1;Parent=gene-CCO56_RS03800;Dbxref=GenBank:WP_000058861.1;Name=WP_000058861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=CCO56_RS03800;product=ABC transporter ATP-binding protein;protein_id=WP_000058861.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 96279 97187 . - . ID=gene-CCO56_RS03805;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=CCO56_RS03805;old_locus_tag=CCO56_03805 NZ_NPMB01000002.1 Protein Homology CDS 96279 97187 . - 0 ID=cds-WP_000979653.1;Parent=gene-CCO56_RS03805;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=CCO56_RS03805;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 97202 98122 . - . ID=gene-CCO56_RS03810;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=CCO56_RS03810;old_locus_tag=CCO56_03810 NZ_NPMB01000002.1 Protein Homology CDS 97202 98122 . - 0 ID=cds-WP_000911097.1;Parent=gene-CCO56_RS03810;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=CCO56_RS03810;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 98245 99876 . - . ID=gene-CCO56_RS03815;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=CCO56_RS03815;old_locus_tag=CCO56_03815 NZ_NPMB01000002.1 Protein Homology CDS 98245 99876 . - 0 ID=cds-WP_058344212.1;Parent=gene-CCO56_RS03815;Dbxref=GenBank:WP_058344212.1;Name=WP_058344212.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=CCO56_RS03815;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_058344212.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 100653 101300 . - . ID=gene-CCO56_RS03825;Name=CCO56_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03825;old_locus_tag=CCO56_03825 NZ_NPMB01000002.1 Protein Homology CDS 100653 101300 . - 0 ID=cds-WP_000615840.1;Parent=gene-CCO56_RS03825;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=CCO56_RS03825;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 101777 104455 . + . ID=gene-CCO56_RS03830;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=CCO56_RS03830;old_locus_tag=CCO56_03830 NZ_NPMB01000002.1 Protein Homology CDS 101777 104455 . + 0 ID=cds-WP_000301679.1;Parent=gene-CCO56_RS03830;Dbxref=GenBank:WP_000301679.1;Name=WP_000301679.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=CCO56_RS03830;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301679.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 104652 105269 . - . ID=gene-CCO56_RS03835;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=CCO56_RS03835;old_locus_tag=CCO56_03835 NZ_NPMB01000002.1 Protein Homology CDS 104652 105269 . - 0 ID=cds-WP_000068097.1;Parent=gene-CCO56_RS03835;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=CCO56_RS03835;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 105932 106345 . + . ID=gene-CCO56_RS03840;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=CCO56_RS03840;old_locus_tag=CCO56_03840 NZ_NPMB01000002.1 Protein Homology CDS 105932 106345 . + 0 ID=cds-WP_001287383.1;Parent=gene-CCO56_RS03840;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=CCO56_RS03840;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 106477 107385 . - . ID=gene-CCO56_RS03845;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CCO56_RS03845;old_locus_tag=CCO56_03845 NZ_NPMB01000002.1 Protein Homology CDS 106477 107385 . - 0 ID=cds-WP_000729450.1;Parent=gene-CCO56_RS03845;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=CCO56_RS03845;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 107588 108601 . - . ID=gene-CCO56_RS03850;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=CCO56_RS03850;old_locus_tag=CCO56_03850 NZ_NPMB01000002.1 Protein Homology CDS 107588 108601 . - 0 ID=cds-WP_000193432.1;Parent=gene-CCO56_RS03850;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=CCO56_RS03850;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 108692 109597 . - . ID=gene-CCO56_RS03855;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=CCO56_RS03855;old_locus_tag=CCO56_03855 NZ_NPMB01000002.1 Protein Homology CDS 108692 109597 . - 0 ID=cds-WP_001230575.1;Parent=gene-CCO56_RS03855;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=CCO56_RS03855;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 109708 110166 . + . ID=gene-CCO56_RS03860;Name=CCO56_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03860;old_locus_tag=CCO56_03860 NZ_NPMB01000002.1 Protein Homology CDS 109708 110166 . + 0 ID=cds-WP_023257667.1;Parent=gene-CCO56_RS03860;Dbxref=GenBank:WP_023257667.1;Name=WP_023257667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=CCO56_RS03860;product=YchJ family protein;protein_id=WP_023257667.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 110217 111059 . + . ID=gene-CCO56_RS03865;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=CCO56_RS03865;old_locus_tag=CCO56_03865 NZ_NPMB01000002.1 Protein Homology CDS 110217 111059 . + 0 ID=cds-WP_001191156.1;Parent=gene-CCO56_RS03865;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=CCO56_RS03865;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 111230 111371 . + . ID=gene-CCO56_RS03870;Name=CCO56_RS03870;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO56_RS03870;old_locus_tag=CCO56_03870 NZ_NPMB01000002.1 cmsearch ncRNA 111230 111371 . + . ID=rna-CCO56_RS03870;Parent=gene-CCO56_RS03870;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS03870;product=RtT sRNA NZ_NPMB01000002.1 cmsearch exon 111230 111371 . + . ID=exon-CCO56_RS03870-1;Parent=rna-CCO56_RS03870;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS03870;product=RtT sRNA NZ_NPMB01000002.1 RefSeq gene 111400 111484 . + . ID=gene-CCO56_RS03875;Name=CCO56_RS03875;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS03875;old_locus_tag=CCO56_03875 NZ_NPMB01000002.1 tRNAscan-SE tRNA 111400 111484 . + . ID=rna-CCO56_RS03875;Parent=gene-CCO56_RS03875;anticodon=(pos:111434..111436);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS03875;product=tRNA-Tyr NZ_NPMB01000002.1 tRNAscan-SE exon 111400 111484 . + . ID=exon-CCO56_RS03875-1;Parent=rna-CCO56_RS03875;anticodon=(pos:111434..111436);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS03875;product=tRNA-Tyr NZ_NPMB01000002.1 RefSeq gene 111529 111660 . + . ID=gene-CCO56_RS03880;Name=CCO56_RS03880;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO56_RS03880;old_locus_tag=CCO56_03880 NZ_NPMB01000002.1 cmsearch ncRNA 111529 111660 . + . ID=rna-CCO56_RS03880;Parent=gene-CCO56_RS03880;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS03880;product=RtT sRNA NZ_NPMB01000002.1 cmsearch exon 111529 111660 . + . ID=exon-CCO56_RS03880-1;Parent=rna-CCO56_RS03880;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS03880;product=RtT sRNA NZ_NPMB01000002.1 RefSeq gene 111695 111779 . + . ID=gene-CCO56_RS03885;Name=CCO56_RS03885;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS03885;old_locus_tag=CCO56_03885 NZ_NPMB01000002.1 tRNAscan-SE tRNA 111695 111779 . + . ID=rna-CCO56_RS03885;Parent=gene-CCO56_RS03885;anticodon=(pos:111729..111731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS03885;product=tRNA-Tyr NZ_NPMB01000002.1 tRNAscan-SE exon 111695 111779 . + . ID=exon-CCO56_RS03885-1;Parent=rna-CCO56_RS03885;anticodon=(pos:111729..111731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS03885;product=tRNA-Tyr NZ_NPMB01000002.1 RefSeq gene 111824 111955 . + . ID=gene-CCO56_RS03890;Name=CCO56_RS03890;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO56_RS03890;old_locus_tag=CCO56_03890 NZ_NPMB01000002.1 cmsearch ncRNA 111824 111955 . + . ID=rna-CCO56_RS03890;Parent=gene-CCO56_RS03890;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS03890;product=RtT sRNA NZ_NPMB01000002.1 cmsearch exon 111824 111955 . + . ID=exon-CCO56_RS03890-1;Parent=rna-CCO56_RS03890;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS03890;product=RtT sRNA NZ_NPMB01000002.1 RefSeq gene 112072 112626 . + . ID=gene-CCO56_RS03895;Name=CCO56_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03895;old_locus_tag=CCO56_03895 NZ_NPMB01000002.1 Protein Homology CDS 112072 112626 . + 0 ID=cds-WP_001088482.1;Parent=gene-CCO56_RS03895;Dbxref=GenBank:WP_001088482.1;Name=WP_001088482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088482.1;locus_tag=CCO56_RS03895;product=AAA family ATPase;protein_id=WP_001088482.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 112794 113471 . - . ID=gene-CCO56_RS03900;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO56_RS03900;old_locus_tag=CCO56_03900 NZ_NPMB01000002.1 Protein Homology CDS 112794 113471 . - 0 ID=cds-WP_000545592.1;Parent=gene-CCO56_RS03900;Dbxref=GenBank:WP_000545592.1;Name=WP_000545592.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=CCO56_RS03900;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545592.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 113471 114181 . - . ID=gene-CCO56_RS03905;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=CCO56_RS03905;old_locus_tag=CCO56_03905 NZ_NPMB01000002.1 Protein Homology CDS 113471 114181 . - 0 ID=cds-WP_080177120.1;Parent=gene-CCO56_RS03905;Dbxref=GenBank:WP_080177120.1;Name=WP_080177120.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=CCO56_RS03905;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_080177120.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 114178 115713 . - . ID=gene-CCO56_RS03910;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO56_RS03910;old_locus_tag=CCO56_03910 NZ_NPMB01000002.1 Protein Homology CDS 114178 115713 . - 0 ID=cds-WP_000702629.1;Parent=gene-CCO56_RS03910;Dbxref=GenBank:WP_000702629.1;Name=WP_000702629.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=CCO56_RS03910;product=nitrate reductase subunit beta;protein_id=WP_000702629.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 115710 119453 . - . ID=gene-CCO56_RS03915;Name=CCO56_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03915;old_locus_tag=CCO56_03915 NZ_NPMB01000002.1 Protein Homology CDS 115710 119453 . - 0 ID=cds-WP_080177119.1;Parent=gene-CCO56_RS03915;Dbxref=GenBank:WP_080177119.1;Name=WP_080177119.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=CCO56_RS03915;product=nitrate reductase subunit alpha;protein_id=WP_080177119.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 119841 121238 . - . ID=gene-CCO56_RS03920;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=CCO56_RS03920;old_locus_tag=CCO56_03920 NZ_NPMB01000002.1 Protein Homology CDS 119841 121238 . - 0 ID=cds-WP_094882034.1;Parent=gene-CCO56_RS03920;Dbxref=GenBank:WP_094882034.1;Name=WP_094882034.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=CCO56_RS03920;product=nitrate transporter NarK;protein_id=WP_094882034.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 121577 123373 . + . ID=gene-CCO56_RS03930;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=CCO56_RS03930;old_locus_tag=CCO56_03930 NZ_NPMB01000002.1 Protein Homology CDS 121577 123373 . + 0 ID=cds-WP_080177117.1;Parent=gene-CCO56_RS03930;Dbxref=GenBank:WP_080177117.1;Name=WP_080177117.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=CCO56_RS03930;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_080177117.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 123366 124016 . + . ID=gene-CCO56_RS03935;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=CCO56_RS03935;old_locus_tag=CCO56_03935 NZ_NPMB01000002.1 Protein Homology CDS 123366 124016 . + 0 ID=cds-WP_001064598.1;Parent=gene-CCO56_RS03935;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=CCO56_RS03935;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 124017 125441 . - . ID=gene-CCO56_RS03940;Name=CCO56_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03940;old_locus_tag=CCO56_03940 NZ_NPMB01000002.1 Protein Homology CDS 124017 125441 . - 0 ID=cds-WP_024147017.1;Parent=gene-CCO56_RS03940;Dbxref=GenBank:WP_024147017.1;Name=WP_024147017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=CCO56_RS03940;product=YchO/YchP family invasin;protein_id=WP_024147017.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 125618 125971 . + . ID=gene-CCO56_RS03945;Name=CCO56_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS03945;old_locus_tag=CCO56_03945 NZ_NPMB01000002.1 Protein Homology CDS 125618 125971 . + 0 ID=cds-WP_001179795.1;Parent=gene-CCO56_RS03945;Dbxref=GenBank:WP_001179795.1;Name=WP_001179795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=CCO56_RS03945;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179795.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 126051 126281 . - . ID=gene-CCO56_RS03950;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=CCO56_RS03950;old_locus_tag=CCO56_03950 NZ_NPMB01000002.1 Protein Homology CDS 126051 126281 . - 0 ID=cds-WP_001146392.1;Parent=gene-CCO56_RS03950;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=CCO56_RS03950;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 126548 127648 . + . ID=gene-CCO56_RS03955;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=CCO56_RS03955;old_locus_tag=CCO56_03955 NZ_NPMB01000002.1 Protein Homology CDS 126548 127648 . + 0 ID=cds-WP_000148418.1;Parent=gene-CCO56_RS03955;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=CCO56_RS03955;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 127702 128556 . - . ID=gene-CCO56_RS03960;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CCO56_RS03960;old_locus_tag=CCO56_03960 NZ_NPMB01000002.1 Protein Homology CDS 127702 128556 . - 0 ID=cds-WP_000811046.1;Parent=gene-CCO56_RS03960;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=CCO56_RS03960;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 128594 129403 . - . ID=gene-CCO56_RS03965;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=CCO56_RS03965;old_locus_tag=CCO56_03965 NZ_NPMB01000002.1 Protein Homology CDS 128594 129403 . - 0 ID=cds-WP_001257065.1;Parent=gene-CCO56_RS03965;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=CCO56_RS03965;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 129407 129796 . - . ID=gene-CCO56_RS03970;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=CCO56_RS03970;old_locus_tag=CCO56_03970 NZ_NPMB01000002.1 Protein Homology CDS 129407 129796 . - 0 ID=cds-WP_000150667.1;Parent=gene-CCO56_RS03970;Dbxref=GenBank:WP_000150667.1;Name=WP_000150667.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=CCO56_RS03970;product=invasion regulator SirB2;protein_id=WP_000150667.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 129793 130626 . - . ID=gene-CCO56_RS03975;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CCO56_RS03975;old_locus_tag=CCO56_03975 NZ_NPMB01000002.1 Protein Homology CDS 129793 130626 . - 0 ID=cds-WP_023262493.1;Parent=gene-CCO56_RS03975;Dbxref=GenBank:WP_023262493.1;Name=WP_023262493.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=CCO56_RS03975;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_023262493.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 130626 131708 . - . ID=gene-CCO56_RS03980;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CCO56_RS03980;old_locus_tag=CCO56_03980 NZ_NPMB01000002.1 Protein Homology CDS 130626 131708 . - 0 ID=cds-WP_000804708.1;Parent=gene-CCO56_RS03980;Dbxref=GenBank:WP_000804708.1;Name=WP_000804708.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=CCO56_RS03980;product=peptide chain release factor 1;protein_id=WP_000804708.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 131749 133005 . - . ID=gene-CCO56_RS03985;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CCO56_RS03985;old_locus_tag=CCO56_03985 NZ_NPMB01000002.1 Protein Homology CDS 131749 133005 . - 0 ID=cds-WP_000173208.1;Parent=gene-CCO56_RS03985;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=CCO56_RS03985;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 133319 133942 . + . ID=gene-CCO56_RS03990;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=CCO56_RS03990;old_locus_tag=CCO56_03990 NZ_NPMB01000002.1 Protein Homology CDS 133319 133942 . + 0 ID=cds-WP_000174481.1;Parent=gene-CCO56_RS03990;Dbxref=GenBank:WP_000174481.1;Name=WP_000174481.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=CCO56_RS03990;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174481.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 133939 134790 . + . ID=gene-CCO56_RS03995;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CCO56_RS03995;old_locus_tag=CCO56_03995 NZ_NPMB01000002.1 Protein Homology CDS 133939 134790 . + 0 ID=cds-WP_000988253.1;Parent=gene-CCO56_RS03995;Dbxref=GenBank:WP_000988253.1;Name=WP_000988253.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=CCO56_RS03995;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988253.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 135056 136003 . + . ID=gene-CCO56_RS04000;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=CCO56_RS04000;old_locus_tag=CCO56_04000 NZ_NPMB01000002.1 Protein Homology CDS 135056 136003 . + 0 ID=cds-WP_001518537.1;Parent=gene-CCO56_RS04000;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=CCO56_RS04000;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 136128 137813 . + . ID=gene-CCO56_RS04005;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=CCO56_RS04005;old_locus_tag=CCO56_04005 NZ_NPMB01000002.1 Protein Homology CDS 136128 137813 . + 0 ID=cds-WP_001037188.1;Parent=gene-CCO56_RS04005;Dbxref=GenBank:WP_001037188.1;Name=WP_001037188.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=CCO56_RS04005;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037188.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 137858 138136 . - . ID=gene-CCO56_RS04010;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=CCO56_RS04010;old_locus_tag=CCO56_04010 NZ_NPMB01000002.1 Protein Homology CDS 137858 138136 . - 0 ID=cds-WP_000823878.1;Parent=gene-CCO56_RS04010;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=CCO56_RS04010;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 138412 138996 . + . ID=gene-CCO56_RS04015;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CCO56_RS04015;old_locus_tag=CCO56_04015 NZ_NPMB01000002.1 Protein Homology CDS 138412 138996 . + 0 ID=cds-WP_000985595.1;Parent=gene-CCO56_RS04015;Dbxref=GenBank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=CCO56_RS04015;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 139113 140204 . + . ID=gene-CCO56_RS04020;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CCO56_RS04020;old_locus_tag=CCO56_04020 NZ_NPMB01000002.1 Protein Homology CDS 139113 140204 . + 0 ID=cds-WP_000505850.1;Parent=gene-CCO56_RS04020;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=CCO56_RS04020;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 140363 141628 . - . ID=gene-CCO56_RS04025;Name=CCO56_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04025;old_locus_tag=CCO56_04025 NZ_NPMB01000002.1 Protein Homology CDS 140363 141628 . - 0 ID=cds-WP_080177116.1;Parent=gene-CCO56_RS04025;Dbxref=GenBank:WP_080177116.1;Name=WP_080177116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=CCO56_RS04025;product=DUF4427 domain-containing protein;protein_id=WP_080177116.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 142121 143239 . + . ID=gene-CCO56_RS04030;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=CCO56_RS04030;old_locus_tag=CCO56_04030 NZ_NPMB01000002.1 Protein Homology CDS 142121 143239 . + 0 ID=cds-WP_001058312.1;Parent=gene-CCO56_RS04030;Dbxref=GenBank:WP_001058312.1;Name=WP_001058312.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=CCO56_RS04030;product=hydrogenase 1 small subunit;protein_id=WP_001058312.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 143236 145029 . + . ID=gene-CCO56_RS04035;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=CCO56_RS04035;old_locus_tag=CCO56_04035 NZ_NPMB01000002.1 Protein Homology CDS 143236 145029 . + 0 ID=cds-WP_000070982.1;Parent=gene-CCO56_RS04035;Dbxref=GenBank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=CCO56_RS04035;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 145048 145779 . + . ID=gene-CCO56_RS04040;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=CCO56_RS04040;old_locus_tag=CCO56_04040 NZ_NPMB01000002.1 Protein Homology CDS 145048 145779 . + 0 ID=cds-WP_000147031.1;Parent=gene-CCO56_RS04040;Dbxref=GenBank:WP_000147031.1;Name=WP_000147031.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=CCO56_RS04040;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147031.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 145776 146372 . + . ID=gene-CCO56_RS04045;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=CCO56_RS04045;old_locus_tag=CCO56_04045 NZ_NPMB01000002.1 Protein Homology CDS 145776 146372 . + 0 ID=cds-WP_000993804.1;Parent=gene-CCO56_RS04045;Dbxref=GenBank:WP_000993804.1;Name=WP_000993804.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=CCO56_RS04045;product=hydrogenase 1 maturation protease;protein_id=WP_000993804.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 146362 146766 . + . ID=gene-CCO56_RS04050;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=CCO56_RS04050;old_locus_tag=CCO56_04050 NZ_NPMB01000002.1 Protein Homology CDS 146362 146766 . + 0 ID=cds-WP_001262570.1;Parent=gene-CCO56_RS04050;Dbxref=GenBank:WP_001262570.1;Name=WP_001262570.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=CCO56_RS04050;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262570.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 146763 147611 . + . ID=gene-CCO56_RS04055;Name=CCO56_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04055;old_locus_tag=CCO56_04055 NZ_NPMB01000002.1 Protein Homology CDS 146763 147611 . + 0 ID=cds-WP_094882035.1;Parent=gene-CCO56_RS04055;Dbxref=GenBank:WP_094882035.1;Name=WP_094882035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=CCO56_RS04055;product=hydrogenase expression/formation protein;protein_id=WP_094882035.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 147686 149230 . + . ID=gene-CCO56_RS04060;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=CCO56_RS04060;old_locus_tag=CCO56_04060 NZ_NPMB01000002.1 Protein Homology CDS 147686 149230 . + 0 ID=cds-WP_000263601.1;Parent=gene-CCO56_RS04060;Dbxref=GenBank:WP_000263601.1;Name=WP_000263601.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=CCO56_RS04060;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263601.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 149242 150378 . + . ID=gene-CCO56_RS04065;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=CCO56_RS04065;old_locus_tag=CCO56_04065 NZ_NPMB01000002.1 Protein Homology CDS 149242 150378 . + 0 ID=cds-WP_069722172.1;Parent=gene-CCO56_RS04065;Dbxref=GenBank:WP_069722172.1;Name=WP_069722172.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=CCO56_RS04065;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_069722172.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 150391 150480 . + . ID=gene-CCO56_RS04070;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=CCO56_RS04070;old_locus_tag=CCO56_04070 NZ_NPMB01000002.1 Protein Homology CDS 150391 150480 . + 0 ID=cds-WP_000270306.1;Parent=gene-CCO56_RS04070;Dbxref=GenBank:WP_000270306.1;Name=WP_000270306.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=CCO56_RS04070;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270306.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 150875 152149 . + . ID=gene-CCO56_RS04075;Name=CCO56_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04075;old_locus_tag=CCO56_04075 NZ_NPMB01000002.1 Protein Homology CDS 150875 152149 . + 0 ID=cds-WP_001519734.1;Parent=gene-CCO56_RS04075;Dbxref=GenBank:WP_001519734.1;Name=WP_001519734.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=CCO56_RS04075;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001519734.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 152363 154075 . + . ID=gene-CCO56_RS04080;Name=CCO56_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04080;old_locus_tag=CCO56_04080 NZ_NPMB01000002.1 Protein Homology CDS 152363 154075 . + 0 ID=cds-WP_023193320.1;Parent=gene-CCO56_RS04080;Dbxref=GenBank:WP_023193320.1;Name=WP_023193320.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=CCO56_RS04080;product=alpha%2Calpha-trehalase;protein_id=WP_023193320.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 154138 154392 . - . ID=gene-CCO56_RS04085;Name=CCO56_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04085;old_locus_tag=CCO56_04085 NZ_NPMB01000002.1 Protein Homology CDS 154138 154392 . - 0 ID=cds-WP_000511320.1;Parent=gene-CCO56_RS04085;Dbxref=GenBank:WP_000511320.1;Name=WP_000511320.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=CCO56_RS04085;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511320.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 154561 155295 . + . ID=gene-CCO56_RS04090;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=CCO56_RS04090;old_locus_tag=CCO56_04090 NZ_NPMB01000002.1 Protein Homology CDS 154561 155295 . + 0 ID=cds-WP_000017423.1;Parent=gene-CCO56_RS04090;Dbxref=GenBank:WP_000017423.1;Name=WP_000017423.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=CCO56_RS04090;product=flagellar brake protein YcgR;protein_id=WP_000017423.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 155309 155920 . - . ID=gene-CCO56_RS04095;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=CCO56_RS04095;old_locus_tag=CCO56_04095 NZ_NPMB01000002.1 Protein Homology CDS 155309 155920 . - 0 ID=cds-WP_000776974.1;Parent=gene-CCO56_RS04095;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=CCO56_RS04095;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 156091 157005 . + . ID=gene-CCO56_RS04100;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=CCO56_RS04100;old_locus_tag=CCO56_04100 NZ_NPMB01000002.1 Protein Homology CDS 156091 157005 . + 0 ID=cds-WP_023229562.1;Parent=gene-CCO56_RS04100;Dbxref=GenBank:WP_023229562.1;Name=WP_023229562.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=CCO56_RS04100;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_023229562.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 157102 158817 . + . ID=gene-CCO56_RS04105;Name=CCO56_RS04105;end_range=158817,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS04105;old_locus_tag=CCO56_04105;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 157102 158817 . + 0 ID=cds-CCO56_RS04105;Parent=gene-CCO56_RS04105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;end_range=158817,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=CCO56_RS04105;partial=true;product=potassium/proton antiporter;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 158773 158865 . - . ID=gene-CCO56_RS24075;Name=CCO56_RS24075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24075;partial=true;pseudo=true;start_range=.,158773 NZ_NPMB01000002.1 Protein Homology CDS 158773 158865 . - 0 ID=cds-CCO56_RS24075;Parent=gene-CCO56_RS24075;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=CCO56_RS24075;partial=true;product=hypothetical protein;pseudo=true;start_range=.,158773;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 158898 159968 . - . ID=gene-CCO56_RS04110;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=CCO56_RS04110;old_locus_tag=CCO56_04110 NZ_NPMB01000002.1 Protein Homology CDS 158898 159968 . - 0 ID=cds-WP_080177113.1;Parent=gene-CCO56_RS04110;Dbxref=GenBank:WP_080177113.1;Name=WP_080177113.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=CCO56_RS04110;product=catabolic alanine racemase DadX;protein_id=WP_080177113.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 159982 161280 . - . ID=gene-CCO56_RS04115;Name=CCO56_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04115;old_locus_tag=CCO56_04115 NZ_NPMB01000002.1 Protein Homology CDS 159982 161280 . - 0 ID=cds-WP_001266935.1;Parent=gene-CCO56_RS04115;Dbxref=GenBank:WP_001266935.1;Name=WP_001266935.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=CCO56_RS04115;product=D-amino acid dehydrogenase;protein_id=WP_001266935.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 161603 163135 . + . ID=gene-CCO56_RS04120;Name=CCO56_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04120;old_locus_tag=CCO56_04120 NZ_NPMB01000002.1 Protein Homology CDS 161603 163135 . + 0 ID=cds-WP_080177112.1;Parent=gene-CCO56_RS04120;Dbxref=GenBank:WP_080177112.1;Name=WP_080177112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=CCO56_RS04120;product=SpoVR family protein;protein_id=WP_080177112.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 163182 163901 . - . ID=gene-CCO56_RS04125;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=CCO56_RS04125;old_locus_tag=CCO56_04125 NZ_NPMB01000002.1 Protein Homology CDS 163182 163901 . - 0 ID=cds-WP_000234826.1;Parent=gene-CCO56_RS04125;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=CCO56_RS04125;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 164121 165665 . + . ID=gene-CCO56_RS04130;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=CCO56_RS04130;old_locus_tag=CCO56_04130 NZ_NPMB01000002.1 Protein Homology CDS 164121 165665 . + 0 ID=cds-WP_023137119.1;Parent=gene-CCO56_RS04130;Dbxref=GenBank:WP_023137119.1;Name=WP_023137119.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=CCO56_RS04130;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_023137119.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 165807 166337 . + . ID=gene-CCO56_RS04135;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=CCO56_RS04135;old_locus_tag=CCO56_04135 NZ_NPMB01000002.1 Protein Homology CDS 165807 166337 . + 0 ID=cds-WP_000943470.1;Parent=gene-CCO56_RS04135;Dbxref=GenBank:WP_000943470.1;Name=WP_000943470.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=CCO56_RS04135;product=disulfide bond formation protein DsbB;protein_id=WP_000943470.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 166446 166787 . + . ID=gene-CCO56_RS04140;Name=CCO56_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04140;old_locus_tag=CCO56_04140 NZ_NPMB01000002.1 Protein Homology CDS 166446 166787 . + 0 ID=cds-WP_000018967.1;Parent=gene-CCO56_RS04140;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=CCO56_RS04140;product=DUF1971 domain-containing protein;protein_id=WP_000018967.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 166859 167032 . - . ID=gene-CCO56_RS04145;Name=CCO56_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04145;old_locus_tag=CCO56_04145 NZ_NPMB01000002.1 Protein Homology CDS 166859 167032 . - 0 ID=cds-WP_001083582.1;Parent=gene-CCO56_RS04145;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=CCO56_RS04145;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 167225 167362 . - . ID=gene-CCO56_RS04150;Name=CCO56_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04150;old_locus_tag=CCO56_04150 NZ_NPMB01000002.1 Protein Homology CDS 167225 167362 . - 0 ID=cds-WP_001519337.1;Parent=gene-CCO56_RS04150;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=CCO56_RS04150;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 167714 168160 . - . ID=gene-CCO56_RS04155;Name=CCO56_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04155;old_locus_tag=CCO56_04155 NZ_NPMB01000002.1 Protein Homology CDS 167714 168160 . - 0 ID=cds-WP_001285703.1;Parent=gene-CCO56_RS04155;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=CCO56_RS04155;product=YcgN family cysteine cluster protein;protein_id=WP_001285703.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 168253 168912 . - . ID=gene-CCO56_RS04160;Name=CCO56_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04160;old_locus_tag=CCO56_04160 NZ_NPMB01000002.1 Protein Homology CDS 168253 168912 . - 0 ID=cds-WP_001519895.1;Parent=gene-CCO56_RS04160;Dbxref=GenBank:WP_001519895.1;Name=WP_001519895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=CCO56_RS04160;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001519895.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 168962 169255 . - . ID=gene-CCO56_RS04165;Name=CCO56_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04165;old_locus_tag=CCO56_04165 NZ_NPMB01000002.1 Protein Homology CDS 168962 169255 . - 0 ID=cds-WP_001537109.1;Parent=gene-CCO56_RS04165;Dbxref=GenBank:WP_001537109.1;Name=WP_001537109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=CCO56_RS04165;product=YcgL domain-containing protein;protein_id=WP_001537109.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 169381 170088 . + . ID=gene-CCO56_RS04170;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=CCO56_RS04170;old_locus_tag=CCO56_04170 NZ_NPMB01000002.1 Protein Homology CDS 169381 170088 . + 0 ID=cds-WP_000072527.1;Parent=gene-CCO56_RS04170;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=CCO56_RS04170;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 170112 170924 . + . ID=gene-CCO56_RS04175;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=CCO56_RS04175;old_locus_tag=CCO56_04175 NZ_NPMB01000002.1 Protein Homology CDS 170112 170924 . + 0 ID=cds-WP_000101047.1;Parent=gene-CCO56_RS04175;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=CCO56_RS04175;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 170928 171194 . + . ID=gene-CCO56_RS04180;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=CCO56_RS04180;old_locus_tag=CCO56_04180 NZ_NPMB01000002.1 Protein Homology CDS 170928 171194 . + 0 ID=cds-WP_001185666.1;Parent=gene-CCO56_RS04180;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=CCO56_RS04180;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 171316 172443 . - . ID=gene-CCO56_RS04185;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=CCO56_RS04185;old_locus_tag=CCO56_04185 NZ_NPMB01000002.1 Protein Homology CDS 171316 172443 . - 0 ID=cds-WP_001109128.1;Parent=gene-CCO56_RS04185;Dbxref=GenBank:WP_001109128.1;Name=WP_001109128.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=CCO56_RS04185;product=ribonuclease D;protein_id=WP_001109128.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 172516 174201 . - . ID=gene-CCO56_RS04190;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CCO56_RS04190;old_locus_tag=CCO56_04190 NZ_NPMB01000002.1 Protein Homology CDS 172516 174201 . - 0 ID=cds-WP_000758418.1;Parent=gene-CCO56_RS04190;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=CCO56_RS04190;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 174406 174987 . - . ID=gene-CCO56_RS04200;Name=CCO56_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04200;old_locus_tag=CCO56_04200 NZ_NPMB01000002.1 Protein Homology CDS 174406 174987 . - 0 ID=cds-WP_000290594.1;Parent=gene-CCO56_RS04200;Dbxref=GenBank:WP_000290594.1;Name=WP_000290594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=CCO56_RS04200;product=Slp family lipoprotein;protein_id=WP_000290594.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 175061 175756 . - . ID=gene-CCO56_RS04205;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CCO56_RS04205;old_locus_tag=CCO56_04205 NZ_NPMB01000002.1 Protein Homology CDS 175061 175756 . - 0 ID=cds-WP_001221017.1;Parent=gene-CCO56_RS04205;Dbxref=GenBank:WP_001221017.1;Name=WP_001221017.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=CCO56_RS04205;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221017.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 175814 177724 . - . ID=gene-CCO56_RS04210;Name=CCO56_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04210;old_locus_tag=CCO56_04210 NZ_NPMB01000002.1 Protein Homology CDS 175814 177724 . - 0 ID=cds-WP_000128807.1;Parent=gene-CCO56_RS04210;Dbxref=GenBank:WP_000128807.1;Name=WP_000128807.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=CCO56_RS04210;product=ATP-dependent DNA helicase;protein_id=WP_000128807.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 177856 178200 . + . ID=gene-CCO56_RS04215;Name=CCO56_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04215;old_locus_tag=CCO56_04215 NZ_NPMB01000002.1 Protein Homology CDS 177856 178200 . + 0 ID=cds-WP_000029550.1;Parent=gene-CCO56_RS04215;Dbxref=GenBank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=CCO56_RS04215;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 178206 178385 . - . ID=gene-CCO56_RS04220;Name=CCO56_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04220;old_locus_tag=CCO56_04220 NZ_NPMB01000002.1 Protein Homology CDS 178206 178385 . - 0 ID=cds-WP_000457328.1;Parent=gene-CCO56_RS04220;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=CCO56_RS04220;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 178466 179830 . + . ID=gene-CCO56_RS04225;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=CCO56_RS04225;old_locus_tag=CCO56_04225 NZ_NPMB01000002.1 Protein Homology CDS 178466 179830 . + 0 ID=cds-WP_072206315.1;Parent=gene-CCO56_RS04225;Dbxref=GenBank:WP_072206315.1;Name=WP_072206315.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=CCO56_RS04225;product=aminodeoxychorismate synthase component 1;protein_id=WP_072206315.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 179834 180412 . + . ID=gene-CCO56_RS04230;Name=CCO56_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04230;old_locus_tag=CCO56_04230 NZ_NPMB01000002.1 Protein Homology CDS 179834 180412 . + 0 ID=cds-WP_023196908.1;Parent=gene-CCO56_RS04230;Dbxref=GenBank:WP_023196908.1;Name=WP_023196908.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=CCO56_RS04230;product=CoA pyrophosphatase;protein_id=WP_023196908.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 180676 182040 . + . ID=gene-CCO56_RS04235;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=CCO56_RS04235;old_locus_tag=CCO56_04235 NZ_NPMB01000002.1 Protein Homology CDS 180676 182040 . + 0 ID=cds-WP_000624274.1;Parent=gene-CCO56_RS04235;Dbxref=GenBank:WP_000624274.1;Name=WP_000624274.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=CCO56_RS04235;product=L-serine ammonia-lyase;protein_id=WP_000624274.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 182178 183779 . + . ID=gene-CCO56_RS04240;Name=CCO56_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04240;old_locus_tag=CCO56_04240 NZ_NPMB01000002.1 Protein Homology CDS 182178 183779 . + 0 ID=cds-WP_001192522.1;Parent=gene-CCO56_RS04240;Dbxref=GenBank:WP_001192522.1;Name=WP_001192522.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=CCO56_RS04240;product=EAL domain-containing protein;protein_id=WP_001192522.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 183801 185360 . - . ID=gene-CCO56_RS04245;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=CCO56_RS04245;old_locus_tag=CCO56_04245 NZ_NPMB01000002.1 Protein Homology CDS 183801 185360 . - 0 ID=cds-WP_000421820.1;Parent=gene-CCO56_RS04245;Dbxref=GenBank:WP_000421820.1;Name=WP_000421820.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=CCO56_RS04245;product=CNNM family cation transport protein YoaE;protein_id=WP_000421820.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 185348 185680 . - . ID=gene-CCO56_RS24080;Name=CCO56_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24080;old_locus_tag=CCO56_04250 NZ_NPMB01000002.1 Protein Homology CDS 185348 185680 . - 0 ID=cds-WP_011233029.1;Parent=gene-CCO56_RS24080;Dbxref=GenBank:WP_011233029.1;Name=WP_011233029.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=CCO56_RS24080;product=protein YoaL;protein_id=WP_011233029.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 185833 186801 . + . ID=gene-CCO56_RS04255;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=CCO56_RS04255;old_locus_tag=CCO56_04255 NZ_NPMB01000002.1 Protein Homology CDS 185833 186801 . + 0 ID=cds-WP_000150523.1;Parent=gene-CCO56_RS04255;Dbxref=GenBank:WP_000150523.1;Name=WP_000150523.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=CCO56_RS04255;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150523.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 186854 187654 . + . ID=gene-CCO56_RS04260;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=CCO56_RS04260;old_locus_tag=CCO56_04260 NZ_NPMB01000002.1 Protein Homology CDS 186854 187654 . + 0 ID=cds-WP_000406918.1;Parent=gene-CCO56_RS04260;Dbxref=GenBank:WP_000406918.1;Name=WP_000406918.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=CCO56_RS04260;product=PTS mannose transporter subunit IIC;protein_id=WP_000406918.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 187667 188518 . + . ID=gene-CCO56_RS04265;Name=CCO56_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04265;old_locus_tag=CCO56_04265 NZ_NPMB01000002.1 Protein Homology CDS 187667 188518 . + 0 ID=cds-WP_001518647.1;Parent=gene-CCO56_RS04265;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=CCO56_RS04265;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 188577 189035 . + . ID=gene-CCO56_RS04270;Name=CCO56_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04270;old_locus_tag=CCO56_04270 NZ_NPMB01000002.1 Protein Homology CDS 188577 189035 . + 0 ID=cds-WP_000156279.1;Parent=gene-CCO56_RS04270;Dbxref=GenBank:WP_000156279.1;Name=WP_000156279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=CCO56_RS04270;product=DUF986 family protein;protein_id=WP_000156279.1;transl_table=11 NZ_NPMB01000002.1 cmsearch riboswitch 189232 189333 . + . ID=id-NZ_NPMB01000002.1:189232..189333;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMB01000002.1 RefSeq gene 189445 190011 . + . ID=gene-CCO56_RS04280;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=CCO56_RS04280;old_locus_tag=CCO56_04280 NZ_NPMB01000002.1 Protein Homology CDS 189445 190011 . + 0 ID=cds-WP_001518359.1;Parent=gene-CCO56_RS04280;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=CCO56_RS04280;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 190008 190817 . - . ID=gene-CCO56_RS04285;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=CCO56_RS04285;old_locus_tag=CCO56_04285 NZ_NPMB01000002.1 Protein Homology CDS 190008 190817 . - 0 ID=cds-WP_000010925.1;Parent=gene-CCO56_RS04285;Dbxref=GenBank:WP_000010925.1;Name=WP_000010925.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=CCO56_RS04285;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010925.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 190883 192628 . - . ID=gene-CCO56_RS04290;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO56_RS04290;old_locus_tag=CCO56_04290 NZ_NPMB01000002.1 Protein Homology CDS 190883 192628 . - 0 ID=cds-WP_000730318.1;Parent=gene-CCO56_RS04290;Dbxref=GenBank:WP_000730318.1;Name=WP_000730318.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=CCO56_RS04290;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730318.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 192848 193057 . - . ID=gene-CCO56_RS04295;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO56_RS04295;old_locus_tag=CCO56_04295 NZ_NPMB01000002.1 Protein Homology CDS 192848 193057 . - 0 ID=cds-WP_001062678.1;Parent=gene-CCO56_RS04295;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=CCO56_RS04295;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 193070 193213 . - . ID=gene-CCO56_RS04300;Name=CCO56_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04300;old_locus_tag=CCO56_04300 NZ_NPMB01000002.1 Protein Homology CDS 193070 193213 . - 0 ID=cds-WP_001537930.1;Parent=gene-CCO56_RS04300;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=CCO56_RS04300;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 193862 194149 . - . ID=gene-CCO56_RS04305;Name=CCO56_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04305;old_locus_tag=CCO56_04305 NZ_NPMB01000002.1 Protein Homology CDS 193862 194149 . - 0 ID=cds-WP_001000660.1;Parent=gene-CCO56_RS04305;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=CCO56_RS04305;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 194220 194363 . - . ID=gene-CCO56_RS04310;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=CCO56_RS04310;old_locus_tag=CCO56_04310 NZ_NPMB01000002.1 Protein Homology CDS 194220 194363 . - 0 ID=cds-WP_000714547.1;Parent=gene-CCO56_RS04310;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=CCO56_RS04310;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 194521 194760 . + . ID=gene-CCO56_RS04315;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=CCO56_RS04315;old_locus_tag=CCO56_04315 NZ_NPMB01000002.1 Protein Homology CDS 194521 194760 . + 0 ID=cds-WP_001236778.1;Parent=gene-CCO56_RS04315;Dbxref=GenBank:WP_001236778.1;Name=WP_001236778.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=CCO56_RS04315;product=invasion protein YobH;protein_id=WP_001236778.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 194972 195763 . - . ID=gene-CCO56_RS04320;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=CCO56_RS04320;old_locus_tag=CCO56_04320 NZ_NPMB01000002.1 Protein Homology CDS 194972 195763 . - 0 ID=cds-WP_001262196.1;Parent=gene-CCO56_RS04320;Dbxref=GenBank:WP_001262196.1;Name=WP_001262196.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=CCO56_RS04320;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262196.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 195939 197312 . + . ID=gene-CCO56_RS04325;Name=CCO56_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04325;old_locus_tag=CCO56_04325 NZ_NPMB01000002.1 Protein Homology CDS 195939 197312 . + 0 ID=cds-WP_000416142.1;Parent=gene-CCO56_RS04325;Dbxref=GenBank:WP_000416142.1;Name=WP_000416142.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=CCO56_RS04325;product=MFS transporter;protein_id=WP_000416142.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 197360 198241 . - . ID=gene-CCO56_RS04330;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=CCO56_RS04330;old_locus_tag=CCO56_04330 NZ_NPMB01000002.1 Protein Homology CDS 197360 198241 . - 0 ID=cds-WP_000984498.1;Parent=gene-CCO56_RS04330;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=CCO56_RS04330;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 198434 200482 . - . ID=gene-CCO56_RS04335;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=CCO56_RS04335;old_locus_tag=CCO56_04335 NZ_NPMB01000002.1 Protein Homology CDS 198434 200482 . - 0 ID=cds-WP_001091241.1;Parent=gene-CCO56_RS04335;Dbxref=GenBank:WP_001091241.1;Name=WP_001091241.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=CCO56_RS04335;product=carboxy terminal-processing peptidase;protein_id=WP_001091241.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 200502 201188 . - . ID=gene-CCO56_RS04340;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=CCO56_RS04340;old_locus_tag=CCO56_04340 NZ_NPMB01000002.1 Protein Homology CDS 200502 201188 . - 0 ID=cds-WP_023207867.1;Parent=gene-CCO56_RS04340;Dbxref=GenBank:WP_023207867.1;Name=WP_023207867.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=CCO56_RS04340;product=RNA chaperone ProQ;protein_id=WP_023207867.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 201286 201783 . - . ID=gene-CCO56_RS04345;Name=CCO56_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04345;old_locus_tag=CCO56_04345 NZ_NPMB01000002.1 Protein Homology CDS 201286 201783 . - 0 ID=cds-WP_001518229.1;Parent=gene-CCO56_RS04345;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=CCO56_RS04345;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 201912 203195 . + . ID=gene-CCO56_RS04350;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=CCO56_RS04350;old_locus_tag=CCO56_04350 NZ_NPMB01000002.1 Protein Homology CDS 201912 203195 . + 0 ID=cds-WP_001207293.1;Parent=gene-CCO56_RS04350;Dbxref=GenBank:WP_001207293.1;Name=WP_001207293.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=CCO56_RS04350;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207293.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 203164 205797 . + . ID=gene-CCO56_RS04355;Name=CCO56_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04355;old_locus_tag=CCO56_04355 NZ_NPMB01000002.1 Protein Homology CDS 203164 205797 . + 0 ID=cds-WP_058344222.1;Parent=gene-CCO56_RS04355;Dbxref=GenBank:WP_058344222.1;Name=WP_058344222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=CCO56_RS04355;product=PqiB family protein;protein_id=WP_058344222.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 205875 207314 . + . ID=gene-CCO56_RS04360;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=CCO56_RS04360;old_locus_tag=CCO56_04360 NZ_NPMB01000002.1 Protein Homology CDS 205875 207314 . + 0 ID=cds-WP_058344257.1;Parent=gene-CCO56_RS04360;Dbxref=GenBank:WP_058344257.1;Name=WP_058344257.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=CCO56_RS04360;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_058344257.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 207431 207667 . + . ID=gene-CCO56_RS04365;Name=CCO56_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04365;old_locus_tag=CCO56_04365 NZ_NPMB01000002.1 Protein Homology CDS 207431 207667 . + 0 ID=cds-WP_024131167.1;Parent=gene-CCO56_RS04365;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=CCO56_RS04365;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 207778 207969 . + . ID=gene-CCO56_RS04370;Name=CCO56_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04370;old_locus_tag=CCO56_04370 NZ_NPMB01000002.1 Protein Homology CDS 207778 207969 . + 0 ID=cds-WP_000457838.1;Parent=gene-CCO56_RS04370;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=CCO56_RS04370;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 207988 208638 . - . ID=gene-CCO56_RS04375;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=CCO56_RS04375;old_locus_tag=CCO56_04375 NZ_NPMB01000002.1 Protein Homology CDS 207988 208638 . - 0 ID=cds-WP_058344223.1;Parent=gene-CCO56_RS04375;Dbxref=GenBank:WP_058344223.1;Name=WP_058344223.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=CCO56_RS04375;product=protein-serine/threonine phosphatase;protein_id=WP_058344223.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 208655 208871 . - . ID=gene-CCO56_RS24000;Name=CCO56_RS24000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24000;old_locus_tag=CCO56_04380;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 208655 208871 . - 0 ID=cds-CCO56_RS24000;Parent=gene-CCO56_RS24000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529227.1;locus_tag=CCO56_RS24000;product=serine/threonine protein phosphatase;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 208862 209026 . - . ID=gene-CCO56_RS04385;Name=CCO56_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04385;old_locus_tag=CCO56_04385 NZ_NPMB01000002.1 Protein Homology CDS 208862 209026 . - 0 ID=cds-WP_001134850.1;Parent=gene-CCO56_RS04385;Dbxref=GenBank:WP_001134850.1;Name=WP_001134850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=CCO56_RS04385;product=hypothetical protein;protein_id=WP_001134850.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 209311 210033 . - . ID=gene-CCO56_RS04390;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=CCO56_RS04390;old_locus_tag=CCO56_04390 NZ_NPMB01000002.1 Protein Homology CDS 209311 210033 . - 0 ID=cds-WP_080177110.1;Parent=gene-CCO56_RS04390;Dbxref=GenBank:WP_080177110.1;Name=WP_080177110.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=CCO56_RS04390;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_080177110.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 210717 211112 . + . ID=gene-CCO56_RS04395;Name=CCO56_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04395;old_locus_tag=CCO56_04395 NZ_NPMB01000002.1 Protein Homology CDS 210717 211112 . + 0 ID=cds-WP_000422881.1;Parent=gene-CCO56_RS04395;Dbxref=GenBank:WP_000422881.1;Name=WP_000422881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=CCO56_RS04395;product=DUF1398 domain-containing protein;protein_id=WP_000422881.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 211441 211917 . + . ID=gene-CCO56_RS04400;Name=CCO56_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04400;old_locus_tag=CCO56_04400 NZ_NPMB01000002.1 Protein Homology CDS 211441 211917 . + 0 ID=cds-WP_001529212.1;Parent=gene-CCO56_RS04400;Dbxref=GenBank:WP_001529212.1;Name=WP_001529212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=CCO56_RS04400;product=hypothetical protein;protein_id=WP_001529212.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 212046 212465 . - . ID=gene-CCO56_RS04405;Name=CCO56_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04405;old_locus_tag=CCO56_04405 NZ_NPMB01000002.1 Protein Homology CDS 212046 212465 . - 0 ID=cds-WP_000354406.1;Parent=gene-CCO56_RS04405;Dbxref=GenBank:WP_000354406.1;Name=WP_000354406.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=CCO56_RS04405;product=GNAT family N-acetyltransferase;protein_id=WP_000354406.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 212834 213103 . + . ID=gene-CCO56_RS04415;Name=CCO56_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04415;old_locus_tag=CCO56_04415 NZ_NPMB01000002.1 Protein Homology CDS 212834 213103 . + 0 ID=cds-WP_077909932.1;Parent=gene-CCO56_RS04415;Dbxref=GenBank:WP_077909932.1;Name=WP_077909932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=CCO56_RS04415;product=hypothetical protein;protein_id=WP_077909932.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 213269 213409 . + . ID=gene-CCO56_RS04420;Name=CCO56_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04420;old_locus_tag=CCO56_04420 NZ_NPMB01000002.1 Protein Homology CDS 213269 213409 . + 0 ID=cds-WP_001576018.1;Parent=gene-CCO56_RS04420;Dbxref=GenBank:WP_001576018.1;Name=WP_001576018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=CCO56_RS04420;product=hypothetical protein;protein_id=WP_001576018.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 213555 214083 . - . ID=gene-CCO56_RS04425;Name=CCO56_RS04425;end_range=214083,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS04425;old_locus_tag=CCO56_04425;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 213555 214083 . - 0 ID=cds-CCO56_RS04425;Parent=gene-CCO56_RS04425;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=214083,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO56_RS04425;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 214093 214260 . - . ID=gene-CCO56_RS04430;Name=CCO56_RS04430;end_range=214260,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS04430;old_locus_tag=CCO56_04430;partial=true;pseudo=true;start_range=.,214093 NZ_NPMB01000002.1 Protein Homology CDS 214093 214260 . - 0 ID=cds-CCO56_RS04430;Parent=gene-CCO56_RS04430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=214260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO56_RS04430;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,214093;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 214250 214812 . + . ID=gene-CCO56_RS23300;Name=CCO56_RS23300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23300;old_locus_tag=CCO56_04435;partial=true;pseudo=true;start_range=.,214250 NZ_NPMB01000002.1 Protein Homology CDS 214250 214812 . + 0 ID=cds-CCO56_RS23300;Parent=gene-CCO56_RS23300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO56_RS23300;partial=true;product=fimbrial protein;pseudo=true;start_range=.,214250;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 215604 216518 . + . ID=gene-CCO56_RS04440;Name=CCO56_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04440;old_locus_tag=CCO56_04440 NZ_NPMB01000002.1 Protein Homology CDS 215604 216518 . + 0 ID=cds-WP_001233453.1;Parent=gene-CCO56_RS04440;Dbxref=GenBank:WP_001233453.1;Name=WP_001233453.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=CCO56_RS04440;product=DMT family transporter;protein_id=WP_001233453.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 216651 216809 . + . ID=gene-CCO56_RS04445;Name=CCO56_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04445;old_locus_tag=CCO56_04445 NZ_NPMB01000002.1 Protein Homology CDS 216651 216809 . + 0 ID=cds-WP_000480735.1;Parent=gene-CCO56_RS04445;Dbxref=GenBank:WP_000480735.1;Name=WP_000480735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=CCO56_RS04445;product=DUF5993 family protein;protein_id=WP_000480735.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 216819 217433 . + . ID=gene-CCO56_RS04450;Name=CCO56_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04450;old_locus_tag=CCO56_04450 NZ_NPMB01000002.1 Protein Homology CDS 216819 217433 . + 0 ID=cds-WP_058344224.1;Parent=gene-CCO56_RS04450;Dbxref=GenBank:WP_058344224.1;Name=WP_058344224.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=CCO56_RS04450;product=disulfide bond formation protein B;protein_id=WP_058344224.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 217760 217906 . - . ID=gene-CCO56_RS24085;Name=CCO56_RS24085;end_range=217906,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24085;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 217760 217906 . - 0 ID=cds-CCO56_RS24085;Parent=gene-CCO56_RS24085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=217906,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219268.1;locus_tag=CCO56_RS24085;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 217921 218067 . + . ID=gene-CCO56_RS24090;Name=CCO56_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24090 NZ_NPMB01000002.1 GeneMarkS-2+ CDS 217921 218067 . + 0 ID=cds-WP_000951652.1;Parent=gene-CCO56_RS24090;Dbxref=GenBank:WP_000951652.1;Name=WP_000951652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS24090;product=hypothetical protein;protein_id=WP_000951652.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 218581 218706 . - . ID=gene-CCO56_RS04465;Name=CCO56_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04465;old_locus_tag=CCO56_04465 NZ_NPMB01000002.1 Protein Homology CDS 218581 218706 . - 0 ID=cds-WP_072062146.1;Parent=gene-CCO56_RS04465;Dbxref=GenBank:WP_072062146.1;Name=WP_072062146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=CCO56_RS04465;product=arsenic transporter;protein_id=WP_072062146.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 218697 218898 . + . ID=gene-CCO56_RS23670;Name=CCO56_RS23670;end_range=218898,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23670;partial=true;pseudo=true;start_range=.,218697 NZ_NPMB01000002.1 Protein Homology CDS 218697 218898 . + 0 ID=cds-CCO56_RS23670;Parent=gene-CCO56_RS23670;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=218898,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=CCO56_RS23670;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,218697;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 219276 219476 . + . ID=gene-CCO56_RS04470;Name=CCO56_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04470;old_locus_tag=CCO56_04470 NZ_NPMB01000002.1 Protein Homology CDS 219276 219476 . + 0 ID=cds-WP_031615635.1;Parent=gene-CCO56_RS04470;Dbxref=GenBank:WP_031615635.1;Name=WP_031615635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=CCO56_RS04470;product=PagK family vesicle-borne virulence factor;protein_id=WP_031615635.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 219573 220874 . - . ID=gene-CCO56_RS04475;Name=CCO56_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04475;old_locus_tag=CCO56_04475 NZ_NPMB01000002.1 Protein Homology CDS 219573 220874 . - 0 ID=cds-WP_370805715.1;Parent=gene-CCO56_RS04475;Dbxref=GenBank:WP_370805715.1;Name=WP_370805715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274644.1;locus_tag=CCO56_RS04475;product=tail fiber assembly protein;protein_id=WP_370805715.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 220900 221467 . - . ID=gene-CCO56_RS04480;Name=CCO56_RS04480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS04480;old_locus_tag=CCO56_04480;partial=true;pseudo=true;start_range=.,220900 NZ_NPMB01000002.1 Protein Homology CDS 220900 221467 . - 0 ID=cds-CCO56_RS04480;Parent=gene-CCO56_RS04480;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459887.1;locus_tag=CCO56_RS04480;partial=true;product=phage terminase large subunit family protein;pseudo=true;start_range=.,220900;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 221454 221945 . - . ID=gene-CCO56_RS04485;Name=CCO56_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04485;old_locus_tag=CCO56_04485 NZ_NPMB01000002.1 Protein Homology CDS 221454 221945 . - 0 ID=cds-WP_001629197.1;Parent=gene-CCO56_RS04485;Dbxref=GenBank:WP_001629197.1;Name=WP_001629197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=CCO56_RS04485;product=DUF1441 family protein;protein_id=WP_001629197.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 222000 222182 . + . ID=gene-CCO56_RS04490;Name=CCO56_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04490;old_locus_tag=CCO56_04490 NZ_NPMB01000002.1 Protein Homology CDS 222000 222182 . + 0 ID=cds-WP_024134652.1;Parent=gene-CCO56_RS04490;Dbxref=GenBank:WP_024134652.1;Name=WP_024134652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537366.1;locus_tag=CCO56_RS04490;product=hypothetical protein;protein_id=WP_024134652.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 222247 222414 . + . ID=gene-CCO56_RS04495;Name=CCO56_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04495;old_locus_tag=CCO56_04495 NZ_NPMB01000002.1 Protein Homology CDS 222247 222414 . + 0 ID=cds-WP_000789530.1;Parent=gene-CCO56_RS04495;Dbxref=GenBank:WP_000789530.1;Name=WP_000789530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=CCO56_RS04495;product=lytic enzyme;protein_id=WP_000789530.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 222671 223204 . - . ID=gene-CCO56_RS04500;Name=CCO56_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04500;old_locus_tag=CCO56_04500 NZ_NPMB01000002.1 Protein Homology CDS 222671 223204 . - 0 ID=cds-WP_001633683.1;Parent=gene-CCO56_RS04500;Dbxref=GenBank:WP_001633683.1;Name=WP_001633683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=CCO56_RS04500;product=DUF2514 domain-containing protein;protein_id=WP_001633683.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 223201 223449 . - . ID=gene-CCO56_RS04505;Name=CCO56_RS04505;end_range=223449,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS04505;old_locus_tag=CCO56_04505;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 223201 223449 . - 0 ID=cds-CCO56_RS04505;Parent=gene-CCO56_RS04505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=223449,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=CCO56_RS04505;partial=true;product=glycoside hydrolase family 19 protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 223441 224592 . + . ID=gene-CCO56_RS04510;Name=CCO56_RS04510;end_range=224592,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS04510;old_locus_tag=CCO56_04510;partial=true;pseudo=true;start_range=.,223441 NZ_NPMB01000002.1 Protein Homology CDS 223441 224592 . + 0 ID=cds-CCO56_RS04510;Parent=gene-CCO56_RS04510;Note=The RecE (also known as exonuclease VIII) pathway is an alternative pathway for the initiation of homologous recombination in Escherichia coli. The RecE pathway is activated in recB%2C recC sbcA (suppressors of recB and recC) mutants. Activation of the RecE pathway results in the production of at least two phage proteins relevant for recombinational repair. RecE is a duplex DNA-specific exonuclease which produces 3' overhangs in duplex DNA by preferentially degrading the 5'-ending strands. Recombinational repair of E.coli chromosomal DNA involves as well other proteins: RecA%2C RecF%2C RecJ%2C RecO%2C RecR%2C and RuvC.%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=224592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=CCO56_RS04510;partial=true;product=exonuclease VIII;pseudo=true;start_range=.,223441;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 224622 225701 . + . ID=gene-CCO56_RS04515;Name=CCO56_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04515;old_locus_tag=CCO56_04515 NZ_NPMB01000002.1 Protein Homology CDS 224622 225701 . + 0 ID=cds-WP_001633682.1;Parent=gene-CCO56_RS04515;Dbxref=GenBank:WP_001633682.1;Name=WP_001633682.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=CCO56_RS04515;product=tyrosine-type recombinase/integrase;protein_id=WP_001633682.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 226084 226437 . - . ID=gene-CCO56_RS04525;Name=CCO56_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04525;old_locus_tag=CCO56_04525 NZ_NPMB01000002.1 Protein Homology CDS 226084 226437 . - 0 ID=cds-WP_000722368.1;Parent=gene-CCO56_RS04525;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=CCO56_RS04525;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 226454 227329 . - . ID=gene-CCO56_RS04530;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=CCO56_RS04530;old_locus_tag=CCO56_04530 NZ_NPMB01000002.1 Protein Homology CDS 226454 227329 . - 0 ID=cds-WP_080177187.1;Parent=gene-CCO56_RS04530;Dbxref=GenBank:WP_080177187.1;Name=WP_080177187.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=CCO56_RS04530;product=copper homeostasis membrane protein CopD;protein_id=WP_080177187.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 227330 227704 . - . ID=gene-CCO56_RS04535;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=CCO56_RS04535;old_locus_tag=CCO56_04535 NZ_NPMB01000002.1 Protein Homology CDS 227330 227704 . - 0 ID=cds-WP_000168393.1;Parent=gene-CCO56_RS04535;Dbxref=GenBank:WP_000168393.1;Name=WP_000168393.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=CCO56_RS04535;product=CopC domain-containing protein YobA;protein_id=WP_000168393.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 227842 228072 . + . ID=gene-CCO56_RS04540;Name=CCO56_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04540;old_locus_tag=CCO56_04540 NZ_NPMB01000002.1 Protein Homology CDS 227842 228072 . + 0 ID=cds-WP_000856224.1;Parent=gene-CCO56_RS04540;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=CCO56_RS04540;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 228180 228836 . + . ID=gene-CCO56_RS04545;Name=CCO56_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04545;old_locus_tag=CCO56_04545 NZ_NPMB01000002.1 Protein Homology CDS 228180 228836 . + 0 ID=cds-WP_000100257.1;Parent=gene-CCO56_RS04545;Dbxref=GenBank:WP_000100257.1;Name=WP_000100257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=CCO56_RS04545;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100257.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 228860 229558 . + . ID=gene-CCO56_RS04550;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=CCO56_RS04550;old_locus_tag=CCO56_04550 NZ_NPMB01000002.1 Protein Homology CDS 228860 229558 . + 0 ID=cds-WP_000944280.1;Parent=gene-CCO56_RS04550;Dbxref=GenBank:WP_000944280.1;Name=WP_000944280.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=CCO56_RS04550;product=exodeoxyribonuclease X;protein_id=WP_000944280.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 229595 231646 . - . ID=gene-CCO56_RS04555;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=CCO56_RS04555;old_locus_tag=CCO56_04555 NZ_NPMB01000002.1 Protein Homology CDS 229595 231646 . - 0 ID=cds-WP_000936990.1;Parent=gene-CCO56_RS04555;Dbxref=GenBank:WP_000936990.1;Name=WP_000936990.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=CCO56_RS04555;product=oligopeptidase B;protein_id=WP_000936990.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 231859 232518 . - . ID=gene-CCO56_RS04560;Name=CCO56_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04560;old_locus_tag=CCO56_04560 NZ_NPMB01000002.1 Protein Homology CDS 231859 232518 . - 0 ID=cds-WP_000024706.1;Parent=gene-CCO56_RS04560;Dbxref=GenBank:WP_000024706.1;Name=WP_000024706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=CCO56_RS04560;product=tellurite resistance TerB family protein;protein_id=WP_000024706.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 232612 232965 . - . ID=gene-CCO56_RS04565;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=CCO56_RS04565;old_locus_tag=CCO56_04565 NZ_NPMB01000002.1 Protein Homology CDS 232612 232965 . - 0 ID=cds-WP_001042123.1;Parent=gene-CCO56_RS04565;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=CCO56_RS04565;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 233033 233323 . - . ID=gene-CCO56_RS04570;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=CCO56_RS04570;old_locus_tag=CCO56_04570 NZ_NPMB01000002.1 Protein Homology CDS 233033 233323 . - 0 ID=cds-WP_000257723.1;Parent=gene-CCO56_RS04570;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=CCO56_RS04570;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 233454 234632 . + . ID=gene-CCO56_RS04575;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=CCO56_RS04575;old_locus_tag=CCO56_04575 NZ_NPMB01000002.1 Protein Homology CDS 233454 234632 . + 0 ID=cds-WP_000173436.1;Parent=gene-CCO56_RS04575;Dbxref=GenBank:WP_000173436.1;Name=WP_000173436.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=CCO56_RS04575;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173436.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 234732 235373 . - . ID=gene-CCO56_RS04580;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=CCO56_RS04580;old_locus_tag=CCO56_04580 NZ_NPMB01000002.1 Protein Homology CDS 234732 235373 . - 0 ID=cds-WP_000800494.1;Parent=gene-CCO56_RS04580;Dbxref=GenBank:WP_000800494.1;Name=WP_000800494.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=CCO56_RS04580;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800494.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 235411 237222 . - . ID=gene-CCO56_RS04585;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=CCO56_RS04585;old_locus_tag=CCO56_04585 NZ_NPMB01000002.1 Protein Homology CDS 235411 237222 . - 0 ID=cds-WP_001069118.1;Parent=gene-CCO56_RS04585;Dbxref=GenBank:WP_001069118.1;Name=WP_001069118.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=CCO56_RS04585;product=phosphogluconate dehydratase;protein_id=WP_001069118.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 237457 238932 . - . ID=gene-CCO56_RS04590;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CCO56_RS04590;old_locus_tag=CCO56_04590 NZ_NPMB01000002.1 Protein Homology CDS 237457 238932 . - 0 ID=cds-WP_000301711.1;Parent=gene-CCO56_RS04590;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=CCO56_RS04590;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 239274 240143 . + . ID=gene-CCO56_RS04600;Name=CCO56_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04600;old_locus_tag=CCO56_04600 NZ_NPMB01000002.1 Protein Homology CDS 239274 240143 . + 0 ID=cds-WP_001056719.1;Parent=gene-CCO56_RS04600;Dbxref=GenBank:WP_001056719.1;Name=WP_001056719.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=CCO56_RS04600;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001056719.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 240267 241709 . + . ID=gene-CCO56_RS04605;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CCO56_RS04605;old_locus_tag=CCO56_04605 NZ_NPMB01000002.1 Protein Homology CDS 240267 241709 . + 0 ID=cds-WP_000091156.1;Parent=gene-CCO56_RS04605;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=CCO56_RS04605;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 241782 242753 . - . ID=gene-CCO56_RS04610;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=CCO56_RS04610;old_locus_tag=CCO56_04610 NZ_NPMB01000002.1 Protein Homology CDS 241782 242753 . - 0 ID=cds-WP_080177188.1;Parent=gene-CCO56_RS04610;Dbxref=GenBank:WP_080177188.1;Name=WP_080177188.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=CCO56_RS04610;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_080177188.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 242870 244189 . - . ID=gene-CCO56_RS04620;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=CCO56_RS04620;old_locus_tag=CCO56_04620 NZ_NPMB01000002.1 Protein Homology CDS 242870 244189 . - 0 ID=cds-WP_001184030.1;Parent=gene-CCO56_RS04620;Dbxref=GenBank:WP_001184030.1;Name=WP_001184030.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=CCO56_RS04620;product=murein DD-endopeptidase MepM;protein_id=WP_001184030.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 244205 245149 . - . ID=gene-CCO56_RS04625;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=CCO56_RS04625;old_locus_tag=CCO56_04625 NZ_NPMB01000002.1 Protein Homology CDS 244205 245149 . - 0 ID=cds-WP_000939597.1;Parent=gene-CCO56_RS04625;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=CCO56_RS04625;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 245228 245983 . + . ID=gene-CCO56_RS04630;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=CCO56_RS04630;old_locus_tag=CCO56_04630 NZ_NPMB01000002.1 Protein Homology CDS 245228 245983 . + 0 ID=cds-WP_000203013.1;Parent=gene-CCO56_RS04630;Dbxref=GenBank:WP_000203013.1;Name=WP_000203013.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=CCO56_RS04630;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203013.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 245980 246765 . + . ID=gene-CCO56_RS04635;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=CCO56_RS04635;old_locus_tag=CCO56_04635 NZ_NPMB01000002.1 Protein Homology CDS 245980 246765 . + 0 ID=cds-WP_000571508.1;Parent=gene-CCO56_RS04635;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=CCO56_RS04635;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 246844 247854 . - . ID=gene-CCO56_RS04640;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CCO56_RS04640;old_locus_tag=CCO56_04640 NZ_NPMB01000002.1 Protein Homology CDS 246844 247854 . - 0 ID=cds-WP_000568508.1;Parent=gene-CCO56_RS04640;Dbxref=GenBank:WP_000568508.1;Name=WP_000568508.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=CCO56_RS04640;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568508.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 247863 248474 . - . ID=gene-CCO56_RS04645;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CCO56_RS04645;old_locus_tag=CCO56_04645 NZ_NPMB01000002.1 Protein Homology CDS 247863 248474 . - 0 ID=cds-WP_000580333.1;Parent=gene-CCO56_RS04645;Dbxref=GenBank:WP_000580333.1;Name=WP_000580333.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=CCO56_RS04645;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580333.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 248833 249525 . - . ID=gene-CCO56_RS04650;Name=CCO56_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04650;old_locus_tag=CCO56_04650 NZ_NPMB01000002.1 Protein Homology CDS 248833 249525 . - 0 ID=cds-WP_176207677.1;Parent=gene-CCO56_RS04650;Dbxref=GenBank:WP_176207677.1;Name=WP_176207677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=CCO56_RS04650;product=hypothetical protein;protein_id=WP_176207677.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 249734 250333 . + . ID=gene-CCO56_RS04655;Name=CCO56_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04655;old_locus_tag=CCO56_04655 NZ_NPMB01000002.1 Protein Homology CDS 249734 250333 . + 0 ID=cds-WP_000716750.1;Parent=gene-CCO56_RS04655;Dbxref=GenBank:WP_000716750.1;Name=WP_000716750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=CCO56_RS04655;product=YebB family permuted papain-like enzyme;protein_id=WP_000716750.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 250335 250856 . - . ID=gene-CCO56_RS04660;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=CCO56_RS04660;old_locus_tag=CCO56_04660 NZ_NPMB01000002.1 Protein Homology CDS 250335 250856 . - 0 ID=cds-WP_000022509.1;Parent=gene-CCO56_RS04660;Dbxref=GenBank:WP_000022509.1;Name=WP_000022509.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=CCO56_RS04660;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022509.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 250893 251633 . - . ID=gene-CCO56_RS04665;Name=CCO56_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04665;old_locus_tag=CCO56_04665 NZ_NPMB01000002.1 Protein Homology CDS 250893 251633 . - 0 ID=cds-WP_000907242.1;Parent=gene-CCO56_RS04665;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=CCO56_RS04665;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 251663 252115 . - . ID=gene-CCO56_RS04670;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=CCO56_RS04670;old_locus_tag=CCO56_04670 NZ_NPMB01000002.1 Protein Homology CDS 251663 252115 . - 0 ID=cds-WP_000653693.1;Parent=gene-CCO56_RS04670;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=CCO56_RS04670;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 252218 253990 . - . ID=gene-CCO56_RS04675;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CCO56_RS04675;old_locus_tag=CCO56_04675 NZ_NPMB01000002.1 Protein Homology CDS 252218 253990 . - 0 ID=cds-WP_001258629.1;Parent=gene-CCO56_RS04675;Dbxref=GenBank:WP_001258629.1;Name=WP_001258629.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=CCO56_RS04675;product=aspartate--tRNA ligase;protein_id=WP_001258629.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 254315 254881 . + . ID=gene-CCO56_RS04680;Name=CCO56_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04680;old_locus_tag=CCO56_04680 NZ_NPMB01000002.1 Protein Homology CDS 254315 254881 . + 0 ID=cds-WP_023197261.1;Parent=gene-CCO56_RS04680;Dbxref=GenBank:WP_023197261.1;Name=WP_023197261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=CCO56_RS04680;product=hydrolase;protein_id=WP_023197261.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 254878 255696 . + . ID=gene-CCO56_RS04685;Name=CCO56_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04685;old_locus_tag=CCO56_04685 NZ_NPMB01000002.1 Protein Homology CDS 254878 255696 . + 0 ID=cds-WP_000639235.1;Parent=gene-CCO56_RS04685;Dbxref=GenBank:WP_000639235.1;Name=WP_000639235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=CCO56_RS04685;product=DUF72 domain-containing protein;protein_id=WP_000639235.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 255749 256144 . + . ID=gene-CCO56_RS04690;Name=CCO56_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04690;old_locus_tag=CCO56_04690 NZ_NPMB01000002.1 Protein Homology CDS 255749 256144 . + 0 ID=cds-WP_000252975.1;Parent=gene-CCO56_RS04690;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=CCO56_RS04690;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 256185 256928 . + . ID=gene-CCO56_RS04695;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=CCO56_RS04695;old_locus_tag=CCO56_04695 NZ_NPMB01000002.1 Protein Homology CDS 256185 256928 . + 0 ID=cds-WP_080177190.1;Parent=gene-CCO56_RS04695;Dbxref=GenBank:WP_080177190.1;Name=WP_080177190.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=CCO56_RS04695;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_080177190.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 256925 257896 . + . ID=gene-CCO56_RS04700;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=CCO56_RS04700;old_locus_tag=CCO56_04700 NZ_NPMB01000002.1 Protein Homology CDS 256925 257896 . + 0 ID=cds-WP_000569026.1;Parent=gene-CCO56_RS04700;Dbxref=GenBank:WP_000569026.1;Name=WP_000569026.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=CCO56_RS04700;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000569026.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 258132 258878 . - . ID=gene-CCO56_RS04710;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=CCO56_RS04710;old_locus_tag=CCO56_04710 NZ_NPMB01000002.1 Protein Homology CDS 258132 258878 . - 0 ID=cds-WP_001185781.1;Parent=gene-CCO56_RS04710;Dbxref=GenBank:WP_001185781.1;Name=WP_001185781.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=CCO56_RS04710;product=copper homeostasis protein CutC;protein_id=WP_001185781.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 258898 259467 . - . ID=gene-CCO56_RS04715;Name=CCO56_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04715;old_locus_tag=CCO56_04715 NZ_NPMB01000002.1 Protein Homology CDS 258898 259467 . - 0 ID=cds-WP_000024794.1;Parent=gene-CCO56_RS04715;Dbxref=GenBank:WP_000024794.1;Name=WP_000024794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=CCO56_RS04715;product=VOC family protein;protein_id=WP_000024794.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 259704 261437 . + . ID=gene-CCO56_RS04720;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CCO56_RS04720;old_locus_tag=CCO56_04720 NZ_NPMB01000002.1 Protein Homology CDS 259704 261437 . + 0 ID=cds-WP_001025360.1;Parent=gene-CCO56_RS04720;Dbxref=GenBank:WP_001025360.1;Name=WP_001025360.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=CCO56_RS04720;product=arginine--tRNA ligase;protein_id=WP_001025360.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 261626 263497 . + . ID=gene-CCO56_RS04725;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO56_RS04725;old_locus_tag=CCO56_04725 NZ_NPMB01000002.1 Protein Homology CDS 261626 263497 . + 0 ID=cds-WP_000142857.1;Parent=gene-CCO56_RS04725;Dbxref=GenBank:WP_000142857.1;Name=WP_000142857.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=CCO56_RS04725;product=penicillin-binding protein 2;protein_id=WP_000142857.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 263551 264690 . - . ID=gene-CCO56_RS04730;Name=CCO56_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04730;old_locus_tag=CCO56_04730 NZ_NPMB01000002.1 Protein Homology CDS 263551 264690 . - 0 ID=cds-WP_000989908.1;Parent=gene-CCO56_RS04730;Dbxref=GenBank:WP_000989908.1;Name=WP_000989908.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=CCO56_RS04730;product=glycoside hydrolase family 88/105 protein;protein_id=WP_000989908.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 264927 265319 . - . ID=gene-CCO56_RS04735;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=CCO56_RS04735;old_locus_tag=CCO56_04735 NZ_NPMB01000002.1 Protein Homology CDS 264927 265319 . - 0 ID=cds-WP_001233619.1;Parent=gene-CCO56_RS04735;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=CCO56_RS04735;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 265319 267397 . - . ID=gene-CCO56_RS04740;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO56_RS04740;old_locus_tag=CCO56_04740 NZ_NPMB01000002.1 Protein Homology CDS 265319 267397 . - 0 ID=cds-WP_000002386.1;Parent=gene-CCO56_RS04740;Dbxref=GenBank:WP_000002386.1;Name=WP_000002386.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=CCO56_RS04740;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002386.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 267390 268541 . - . ID=gene-CCO56_RS04745;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=CCO56_RS04745;old_locus_tag=CCO56_04745 NZ_NPMB01000002.1 Protein Homology CDS 267390 268541 . - 0 ID=cds-WP_000797084.1;Parent=gene-CCO56_RS04745;Dbxref=GenBank:WP_000797084.1;Name=WP_000797084.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=CCO56_RS04745;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797084.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 268735 269379 . - . ID=gene-CCO56_RS04750;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=CCO56_RS04750;old_locus_tag=CCO56_04750 NZ_NPMB01000002.1 Protein Homology CDS 268735 269379 . - 0 ID=cds-WP_080177191.1;Parent=gene-CCO56_RS04750;Dbxref=GenBank:WP_080177191.1;Name=WP_080177191.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=CCO56_RS04750;product=protein phosphatase CheZ;protein_id=WP_080177191.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 269390 269779 . - . ID=gene-CCO56_RS04755;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=CCO56_RS04755;old_locus_tag=CCO56_04755 NZ_NPMB01000002.1 Protein Homology CDS 269390 269779 . - 0 ID=cds-WP_000763861.1;Parent=gene-CCO56_RS04755;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=CCO56_RS04755;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 269797 270846 . - . ID=gene-CCO56_RS04760;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=CCO56_RS04760;old_locus_tag=CCO56_04760 NZ_NPMB01000002.1 Protein Homology CDS 269797 270846 . - 0 ID=cds-WP_000036389.1;Parent=gene-CCO56_RS04760;Dbxref=GenBank:WP_000036389.1;Name=WP_000036389.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=CCO56_RS04760;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036389.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 270843 271709 . - . ID=gene-CCO56_RS04765;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=CCO56_RS04765;old_locus_tag=CCO56_04765 NZ_NPMB01000002.1 Protein Homology CDS 270843 271709 . - 0 ID=cds-WP_000204356.1;Parent=gene-CCO56_RS04765;Dbxref=GenBank:WP_000204356.1;Name=WP_000204356.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=CCO56_RS04765;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204356.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 271863 273524 . - . ID=gene-CCO56_RS04770;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=CCO56_RS04770;old_locus_tag=CCO56_04770 NZ_NPMB01000002.1 Protein Homology CDS 271863 273524 . - 0 ID=cds-WP_000483279.1;Parent=gene-CCO56_RS04770;Dbxref=GenBank:WP_000483279.1;Name=WP_000483279.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=CCO56_RS04770;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483279.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 273761 274264 . - . ID=gene-CCO56_RS04775;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=CCO56_RS04775;old_locus_tag=CCO56_04775 NZ_NPMB01000002.1 Protein Homology CDS 273761 274264 . - 0 ID=cds-WP_000147295.1;Parent=gene-CCO56_RS04775;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=CCO56_RS04775;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 274285 276300 . - . ID=gene-CCO56_RS04780;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=CCO56_RS04780;old_locus_tag=CCO56_04780 NZ_NPMB01000002.1 Protein Homology CDS 274285 276300 . - 0 ID=cds-WP_001643474.1;Parent=gene-CCO56_RS04780;Dbxref=GenBank:WP_001643474.1;Name=WP_001643474.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=CCO56_RS04780;product=chemotaxis protein CheA;protein_id=WP_001643474.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 276305 277234 . - . ID=gene-CCO56_RS04785;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=CCO56_RS04785;old_locus_tag=CCO56_04785 NZ_NPMB01000002.1 Protein Homology CDS 276305 277234 . - 0 ID=cds-WP_000795653.1;Parent=gene-CCO56_RS04785;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=CCO56_RS04785;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 277231 278118 . - . ID=gene-CCO56_RS04790;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=CCO56_RS04790;old_locus_tag=CCO56_04790 NZ_NPMB01000002.1 Protein Homology CDS 277231 278118 . - 0 ID=cds-WP_000906312.1;Parent=gene-CCO56_RS04790;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=CCO56_RS04790;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 278243 278827 . - . ID=gene-CCO56_RS04795;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=CCO56_RS04795;old_locus_tag=CCO56_04795 NZ_NPMB01000002.1 Protein Homology CDS 278243 278827 . - 0 ID=cds-WP_000605987.1;Parent=gene-CCO56_RS04795;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=CCO56_RS04795;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 278824 279165 . - . ID=gene-CCO56_RS04800;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=CCO56_RS04800;old_locus_tag=CCO56_04800 NZ_NPMB01000002.1 Protein Homology CDS 278824 279165 . - 0 ID=cds-WP_001518146.1;Parent=gene-CCO56_RS04800;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=CCO56_RS04800;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 279848 279964 . + . ID=gene-CCO56_RS04805;Name=CCO56_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04805;old_locus_tag=CCO56_04805 NZ_NPMB01000002.1 Protein Homology CDS 279848 279964 . + 0 ID=cds-WP_001604673.1;Parent=gene-CCO56_RS04805;Dbxref=GenBank:WP_001604673.1;Name=WP_001604673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=CCO56_RS04805;product=hypothetical protein;protein_id=WP_001604673.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 279961 280389 . + . ID=gene-CCO56_RS04810;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=CCO56_RS04810;old_locus_tag=CCO56_04810 NZ_NPMB01000002.1 Protein Homology CDS 279961 280389 . + 0 ID=cds-WP_000122606.1;Parent=gene-CCO56_RS04810;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=CCO56_RS04810;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 280407 281828 . - . ID=gene-CCO56_RS04815;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=CCO56_RS04815;old_locus_tag=CCO56_04815 NZ_NPMB01000002.1 Protein Homology CDS 280407 281828 . - 0 ID=cds-WP_000089042.1;Parent=gene-CCO56_RS04815;Dbxref=GenBank:WP_000089042.1;Name=WP_000089042.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=CCO56_RS04815;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 281803 282606 . - . ID=gene-CCO56_RS04820;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=CCO56_RS04820;old_locus_tag=CCO56_04820 NZ_NPMB01000002.1 Protein Homology CDS 281803 282606 . - 0 ID=cds-WP_000840114.1;Parent=gene-CCO56_RS04820;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=CCO56_RS04820;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 282829 283009 . - . ID=gene-CCO56_RS04825;Name=araH;end_range=283009,.;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=CCO56_RS04825;old_locus_tag=CCO56_04825;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 282829 283009 . - 0 ID=cds-CCO56_RS04825;Parent=gene-CCO56_RS04825;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=283009,.;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=CCO56_RS04825;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 283238 283795 . - . ID=gene-CCO56_RS04830;Name=CCO56_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04830;old_locus_tag=CCO56_04830 NZ_NPMB01000002.1 Protein Homology CDS 283238 283795 . - 0 ID=cds-WP_000754801.1;Parent=gene-CCO56_RS04830;Dbxref=GenBank:WP_000754801.1;Name=WP_000754801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=CCO56_RS04830;product=DJ-1/PfpI family protein;protein_id=WP_000754801.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 284353 284856 . + . ID=gene-CCO56_RS04835;Name=CCO56_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04835;old_locus_tag=CCO56_04835 NZ_NPMB01000002.1 Protein Homology CDS 284353 284856 . + 0 ID=cds-WP_000741707.1;Parent=gene-CCO56_RS04835;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=CCO56_RS04835;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 285035 285673 . - . ID=gene-CCO56_RS04840;Name=CCO56_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04840;old_locus_tag=CCO56_04840 NZ_NPMB01000002.1 Protein Homology CDS 285035 285673 . - 0 ID=cds-WP_000684804.1;Parent=gene-CCO56_RS04840;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=CCO56_RS04840;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 285928 286263 . + . ID=gene-CCO56_RS04845;Name=CCO56_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04845;old_locus_tag=CCO56_04845 NZ_NPMB01000002.1 Protein Homology CDS 285928 286263 . + 0 ID=cds-WP_094882036.1;Parent=gene-CCO56_RS04845;Dbxref=GenBank:WP_094882036.1;Name=WP_094882036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=CCO56_RS04845;product=YecR-like lipofamily protein;protein_id=WP_094882036.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 286503 287000 . + . ID=gene-CCO56_RS04850;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=CCO56_RS04850;old_locus_tag=CCO56_04850 NZ_NPMB01000002.1 Protein Homology CDS 286503 287000 . + 0 ID=cds-WP_000920619.1;Parent=gene-CCO56_RS04850;Dbxref=GenBank:WP_000920619.1;Name=WP_000920619.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=CCO56_RS04850;product=non-heme ferritin;protein_id=WP_000920619.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 287046 287285 . - . ID=gene-CCO56_RS04855;Name=CCO56_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04855;old_locus_tag=CCO56_04855 NZ_NPMB01000002.1 Protein Homology CDS 287046 287285 . - 0 ID=cds-WP_000377238.1;Parent=gene-CCO56_RS04855;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=CCO56_RS04855;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 287512 288723 . + . ID=gene-CCO56_RS04860;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=CCO56_RS04860;old_locus_tag=CCO56_04860 NZ_NPMB01000002.1 Protein Homology CDS 287512 288723 . + 0 ID=cds-WP_001562965.1;Parent=gene-CCO56_RS04860;Dbxref=GenBank:WP_001562965.1;Name=WP_001562965.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=CCO56_RS04860;product=tyrosine transporter TyrP;protein_id=WP_001562965.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 288798 289463 . - . ID=gene-CCO56_RS04865;Name=CCO56_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04865;old_locus_tag=CCO56_04865 NZ_NPMB01000002.1 Protein Homology CDS 288798 289463 . - 0 ID=cds-WP_000781521.1;Parent=gene-CCO56_RS04865;Dbxref=GenBank:WP_000781521.1;Name=WP_000781521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=CCO56_RS04865;product=YecA family protein;protein_id=WP_000781521.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 289702 290028 . - . ID=gene-CCO56_RS04870;Name=CCO56_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04870;old_locus_tag=CCO56_04870 NZ_NPMB01000002.1 Protein Homology CDS 289702 290028 . - 0 ID=cds-WP_000240837.1;Parent=gene-CCO56_RS04870;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=CCO56_RS04870;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 290241 291680 . - . ID=gene-CCO56_RS04875;Name=CCO56_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04875;old_locus_tag=CCO56_04875 NZ_NPMB01000002.1 Protein Homology CDS 290241 291680 . - 0 ID=cds-WP_080177192.1;Parent=gene-CCO56_RS04875;Dbxref=GenBank:WP_080177192.1;Name=WP_080177192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=CCO56_RS04875;product=SH3 domain-containing C40 family peptidase;protein_id=WP_080177192.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 291894 292225 . - . ID=gene-CCO56_RS04880;Name=CCO56_RS04880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS04880;old_locus_tag=CCO56_04880;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 291894 292225 . - 0 ID=cds-CCO56_RS04880;Parent=gene-CCO56_RS04880;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=CCO56_RS04880;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 292476 292562 . - . ID=gene-CCO56_RS04885;Name=CCO56_RS04885;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS04885;old_locus_tag=CCO56_04885 NZ_NPMB01000002.1 tRNAscan-SE tRNA 292476 292562 . - . ID=rna-CCO56_RS04885;Parent=gene-CCO56_RS04885;anticodon=(pos:complement(292526..292528));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS04885;product=tRNA-Leu NZ_NPMB01000002.1 tRNAscan-SE exon 292476 292562 . - . ID=exon-CCO56_RS04885-1;Parent=rna-CCO56_RS04885;anticodon=(pos:complement(292526..292528));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS04885;product=tRNA-Leu NZ_NPMB01000002.1 RefSeq gene 292574 292647 . - . ID=gene-CCO56_RS04890;Name=CCO56_RS04890;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS04890;old_locus_tag=CCO56_04890 NZ_NPMB01000002.1 tRNAscan-SE tRNA 292574 292647 . - . ID=rna-CCO56_RS04890;Parent=gene-CCO56_RS04890;anticodon=(pos:complement(292613..292615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS04890;product=tRNA-Cys NZ_NPMB01000002.1 tRNAscan-SE exon 292574 292647 . - . ID=exon-CCO56_RS04890-1;Parent=rna-CCO56_RS04890;anticodon=(pos:complement(292613..292615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS04890;product=tRNA-Cys NZ_NPMB01000002.1 RefSeq gene 292699 292774 . - . ID=gene-CCO56_RS04895;Name=CCO56_RS04895;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS04895;old_locus_tag=CCO56_04895 NZ_NPMB01000002.1 tRNAscan-SE tRNA 292699 292774 . - . ID=rna-CCO56_RS04895;Parent=gene-CCO56_RS04895;anticodon=(pos:complement(292739..292741));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS04895;product=tRNA-Gly NZ_NPMB01000002.1 tRNAscan-SE exon 292699 292774 . - . ID=exon-CCO56_RS04895-1;Parent=rna-CCO56_RS04895;anticodon=(pos:complement(292739..292741));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS04895;product=tRNA-Gly NZ_NPMB01000002.1 RefSeq gene 292926 293474 . - . ID=gene-CCO56_RS04900;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CCO56_RS04900;old_locus_tag=CCO56_04900 NZ_NPMB01000002.1 Protein Homology CDS 292926 293474 . - 0 ID=cds-WP_001160192.1;Parent=gene-CCO56_RS04900;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=CCO56_RS04900;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 293531 295363 . - . ID=gene-CCO56_RS04905;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CCO56_RS04905;old_locus_tag=CCO56_04905 NZ_NPMB01000002.1 Protein Homology CDS 293531 295363 . - 0 ID=cds-WP_080177193.1;Parent=gene-CCO56_RS04905;Dbxref=GenBank:WP_080177193.1;Name=WP_080177193.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=CCO56_RS04905;product=excinuclease ABC subunit UvrC;protein_id=WP_080177193.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 295360 296016 . - . ID=gene-CCO56_RS04910;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=CCO56_RS04910;old_locus_tag=CCO56_04910 NZ_NPMB01000002.1 Protein Homology CDS 295360 296016 . - 0 ID=cds-WP_000611323.1;Parent=gene-CCO56_RS04910;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=CCO56_RS04910;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 296328 296441 . + . ID=gene-CCO56_RS04915;Name=CCO56_RS04915;end_range=296441,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS04915;old_locus_tag=CCO56_04915;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 296328 296441 . + 0 ID=cds-CCO56_RS04915;Parent=gene-CCO56_RS04915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=296441,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=CCO56_RS04915;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 296480 296704 . + . ID=gene-CCO56_RS04920;Name=CCO56_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04920;old_locus_tag=CCO56_04920 NZ_NPMB01000002.1 Protein Homology CDS 296480 296704 . + 0 ID=cds-WP_000106483.1;Parent=gene-CCO56_RS04920;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=CCO56_RS04920;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 296771 297493 . - . ID=gene-CCO56_RS04925;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=CCO56_RS04925;old_locus_tag=CCO56_04925 NZ_NPMB01000002.1 Protein Homology CDS 296771 297493 . - 0 ID=cds-WP_001157165.1;Parent=gene-CCO56_RS04925;Dbxref=GenBank:WP_001157165.1;Name=WP_001157165.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=CCO56_RS04925;product=transcriptional regulator SdiA;protein_id=WP_001157165.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 297726 298478 . - . ID=gene-CCO56_RS04930;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=CCO56_RS04930;old_locus_tag=CCO56_04930 NZ_NPMB01000002.1 Protein Homology CDS 297726 298478 . - 0 ID=cds-WP_001273033.1;Parent=gene-CCO56_RS04930;Dbxref=GenBank:WP_001273033.1;Name=WP_001273033.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=CCO56_RS04930;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273033.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 298475 299143 . - . ID=gene-CCO56_RS04935;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=CCO56_RS04935;old_locus_tag=CCO56_04935 NZ_NPMB01000002.1 Protein Homology CDS 298475 299143 . - 0 ID=cds-WP_001158238.1;Parent=gene-CCO56_RS04935;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=CCO56_RS04935;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 299164 300150 . - . ID=gene-CCO56_RS04940;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=CCO56_RS04940;old_locus_tag=CCO56_04940 NZ_NPMB01000002.1 Protein Homology CDS 299164 300150 . - 0 ID=cds-WP_001128188.1;Parent=gene-CCO56_RS04940;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=CCO56_RS04940;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 300304 301104 . - . ID=gene-CCO56_RS04945;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=CCO56_RS04945;old_locus_tag=CCO56_04945 NZ_NPMB01000002.1 Protein Homology CDS 300304 301104 . - 0 ID=cds-WP_000761634.1;Parent=gene-CCO56_RS04945;Dbxref=GenBank:WP_000761634.1;Name=WP_000761634.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=CCO56_RS04945;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761634.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 301251 301802 . - . ID=gene-CCO56_RS04950;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=CCO56_RS04950;old_locus_tag=CCO56_04950 NZ_NPMB01000002.1 Protein Homology CDS 301251 301802 . - 0 ID=cds-WP_000218080.1;Parent=gene-CCO56_RS04950;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=CCO56_RS04950;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 301861 302580 . - . ID=gene-CCO56_RS04955;Name=CCO56_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04955;old_locus_tag=CCO56_04955 NZ_NPMB01000002.1 Protein Homology CDS 301861 302580 . - 0 ID=cds-WP_001087453.1;Parent=gene-CCO56_RS04955;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=CCO56_RS04955;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 302777 303982 . - . ID=gene-CCO56_RS04960;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=CCO56_RS04960;old_locus_tag=CCO56_04960 NZ_NPMB01000002.1 Protein Homology CDS 302777 303982 . - 0 ID=cds-WP_023213146.1;Parent=gene-CCO56_RS04960;Dbxref=GenBank:WP_023213146.1;Name=WP_023213146.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=CCO56_RS04960;product=flagellin lysine-N-methylase;protein_id=WP_023213146.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 304061 305560 . - . ID=gene-CCO56_RS04965;Name=CCO56_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS04965;old_locus_tag=CCO56_04965 NZ_NPMB01000002.1 Protein Homology CDS 304061 305560 . - 0 ID=cds-WP_061383439.1;Parent=gene-CCO56_RS04965;Dbxref=GenBank:WP_061383439.1;Name=WP_061383439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460912.1;locus_tag=CCO56_RS04965;product=FliC/FljB family flagellin;protein_id=WP_061383439.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 305817 307220 . + . ID=gene-CCO56_RS04970;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=CCO56_RS04970;old_locus_tag=CCO56_04970 NZ_NPMB01000002.1 Protein Homology CDS 305817 307220 . + 0 ID=cds-WP_000146806.1;Parent=gene-CCO56_RS04970;Dbxref=GenBank:WP_000146806.1;Name=WP_000146806.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=CCO56_RS04970;product=flagellar filament capping protein FliD;protein_id=WP_000146806.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 307235 307642 . + . ID=gene-CCO56_RS04975;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=CCO56_RS04975;old_locus_tag=CCO56_04975 NZ_NPMB01000002.1 Protein Homology CDS 307235 307642 . + 0 ID=cds-WP_000287764.1;Parent=gene-CCO56_RS04975;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=CCO56_RS04975;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 307642 308010 . + . ID=gene-CCO56_RS04980;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=CCO56_RS04980;old_locus_tag=CCO56_04980 NZ_NPMB01000002.1 Protein Homology CDS 307642 308010 . + 0 ID=cds-WP_000204899.1;Parent=gene-CCO56_RS04980;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=CCO56_RS04980;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 308082 309566 . + . ID=gene-CCO56_RS04985;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=CCO56_RS04985;old_locus_tag=CCO56_04985 NZ_NPMB01000002.1 Protein Homology CDS 308082 309566 . + 0 ID=cds-WP_023204182.1;Parent=gene-CCO56_RS04985;Dbxref=GenBank:WP_023204182.1;Name=WP_023204182.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=CCO56_RS04985;product=alpha-amylase;protein_id=WP_023204182.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 309606 310019 . - . ID=gene-CCO56_RS04990;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=CCO56_RS04990;old_locus_tag=CCO56_04990 NZ_NPMB01000002.1 Protein Homology CDS 309606 310019 . - 0 ID=cds-WP_000754694.1;Parent=gene-CCO56_RS04990;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=CCO56_RS04990;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 310205 311410 . + . ID=gene-CCO56_RS04995;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=CCO56_RS04995;old_locus_tag=CCO56_04995 NZ_NPMB01000002.1 Protein Homology CDS 310205 311410 . + 0 ID=cds-WP_023212509.1;Parent=gene-CCO56_RS04995;Dbxref=GenBank:WP_023212509.1;Name=WP_023212509.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=CCO56_RS04995;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_023212509.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 311407 311640 . + . ID=gene-CCO56_RS05000;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=CCO56_RS05000;old_locus_tag=CCO56_05000 NZ_NPMB01000002.1 Protein Homology CDS 311407 311640 . + 0 ID=cds-WP_000790504.1;Parent=gene-CCO56_RS05000;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=CCO56_RS05000;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 311905 312291 . + . ID=gene-CCO56_RS05005;Name=CCO56_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05005;old_locus_tag=CCO56_05005 NZ_NPMB01000002.1 Protein Homology CDS 311905 312291 . + 0 ID=cds-WP_077908838.1;Parent=gene-CCO56_RS05005;Dbxref=GenBank:WP_077908838.1;Name=WP_077908838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=CCO56_RS05005;product=hypothetical protein;protein_id=WP_077908838.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 312412 312726 . - . ID=gene-CCO56_RS05010;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=CCO56_RS05010;old_locus_tag=CCO56_05010 NZ_NPMB01000002.1 Protein Homology CDS 312412 312726 . - 0 ID=cds-WP_000719037.1;Parent=gene-CCO56_RS05010;Dbxref=GenBank:WP_000719037.1;Name=WP_000719037.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=CCO56_RS05010;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719037.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 312943 314625 . + . ID=gene-CCO56_RS05015;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=CCO56_RS05015;old_locus_tag=CCO56_05015 NZ_NPMB01000002.1 Protein Homology CDS 312943 314625 . + 0 ID=cds-WP_001276832.1;Parent=gene-CCO56_RS05015;Dbxref=GenBank:WP_001276832.1;Name=WP_001276832.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=CCO56_RS05015;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_001276832.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 314618 315613 . + . ID=gene-CCO56_RS05020;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=CCO56_RS05020;old_locus_tag=CCO56_05020 NZ_NPMB01000002.1 Protein Homology CDS 314618 315613 . + 0 ID=cds-WP_000067735.1;Parent=gene-CCO56_RS05020;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=CCO56_RS05020;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 315606 316313 . + . ID=gene-CCO56_RS05025;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=CCO56_RS05025;old_locus_tag=CCO56_05025 NZ_NPMB01000002.1 Protein Homology CDS 315606 316313 . + 0 ID=cds-WP_000064158.1;Parent=gene-CCO56_RS05025;Dbxref=GenBank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=CCO56_RS05025;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 316313 317683 . + . ID=gene-CCO56_RS05030;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=CCO56_RS05030;old_locus_tag=CCO56_05030 NZ_NPMB01000002.1 Protein Homology CDS 316313 317683 . + 0 ID=cds-WP_000213257.1;Parent=gene-CCO56_RS05030;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=CCO56_RS05030;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 317705 318148 . + . ID=gene-CCO56_RS05035;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=CCO56_RS05035;old_locus_tag=CCO56_05035 NZ_NPMB01000002.1 Protein Homology CDS 317705 318148 . + 0 ID=cds-WP_000046981.1;Parent=gene-CCO56_RS05035;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=CCO56_RS05035;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 318145 319368 . + . ID=gene-CCO56_RS05040;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=CCO56_RS05040;old_locus_tag=CCO56_05040 NZ_NPMB01000002.1 Protein Homology CDS 318145 319368 . + 0 ID=cds-WP_023217298.1;Parent=gene-CCO56_RS05040;Dbxref=GenBank:WP_023217298.1;Name=WP_023217298.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=CCO56_RS05040;product=flagellar hook length control protein FliK;protein_id=WP_023217298.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 319473 319940 . + . ID=gene-CCO56_RS05045;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=CCO56_RS05045;old_locus_tag=CCO56_05045 NZ_NPMB01000002.1 Protein Homology CDS 319473 319940 . + 0 ID=cds-WP_000132169.1;Parent=gene-CCO56_RS05045;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=CCO56_RS05045;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 319945 320949 . + . ID=gene-CCO56_RS05050;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=CCO56_RS05050;old_locus_tag=CCO56_05050 NZ_NPMB01000002.1 Protein Homology CDS 319945 320949 . + 0 ID=cds-WP_080177311.1;Parent=gene-CCO56_RS05050;Dbxref=GenBank:WP_080177311.1;Name=WP_080177311.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=CCO56_RS05050;product=flagellar motor switch protein FliM;protein_id=WP_080177311.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 320946 321359 . + . ID=gene-CCO56_RS05055;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=CCO56_RS05055;old_locus_tag=CCO56_05055 NZ_NPMB01000002.1 Protein Homology CDS 320946 321359 . + 0 ID=cds-WP_001282111.1;Parent=gene-CCO56_RS05055;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=CCO56_RS05055;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 321359 321736 . + . ID=gene-CCO56_RS05060;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=CCO56_RS05060;old_locus_tag=CCO56_05060 NZ_NPMB01000002.1 Protein Homology CDS 321359 321736 . + 0 ID=cds-WP_000978275.1;Parent=gene-CCO56_RS05060;Dbxref=GenBank:WP_000978275.1;Name=WP_000978275.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=CCO56_RS05060;product=flagellar biosynthetic protein FliO;protein_id=WP_000978275.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 321736 322473 . + . ID=gene-CCO56_RS05065;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=CCO56_RS05065;old_locus_tag=CCO56_05065 NZ_NPMB01000002.1 Protein Homology CDS 321736 322473 . + 0 ID=cds-WP_001253411.1;Parent=gene-CCO56_RS05065;Dbxref=GenBank:WP_001253411.1;Name=WP_001253411.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=CCO56_RS05065;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253411.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 322483 322752 . + . ID=gene-CCO56_RS05070;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=CCO56_RS05070;old_locus_tag=CCO56_05070 NZ_NPMB01000002.1 Protein Homology CDS 322483 322752 . + 0 ID=cds-WP_000187355.1;Parent=gene-CCO56_RS05070;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=CCO56_RS05070;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 322761 323555 . + . ID=gene-CCO56_RS05075;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=CCO56_RS05075;old_locus_tag=CCO56_05075 NZ_NPMB01000002.1 Protein Homology CDS 322761 323555 . + 0 ID=cds-WP_000616953.1;Parent=gene-CCO56_RS05075;Dbxref=GenBank:WP_000616953.1;Name=WP_000616953.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=CCO56_RS05075;product=flagellar biosynthetic protein FliR;protein_id=WP_000616953.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 323837 324460 . + . ID=gene-CCO56_RS05080;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=CCO56_RS05080;old_locus_tag=CCO56_05080 NZ_NPMB01000002.1 Protein Homology CDS 323837 324460 . + 0 ID=cds-WP_000103974.1;Parent=gene-CCO56_RS05080;Dbxref=GenBank:WP_000103974.1;Name=WP_000103974.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=CCO56_RS05080;product=transcriptional regulator RcsA;protein_id=WP_000103974.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 324499 324693 . - . ID=gene-CCO56_RS05085;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=CCO56_RS05085;old_locus_tag=CCO56_05085 NZ_NPMB01000002.1 Protein Homology CDS 324499 324693 . - 0 ID=cds-WP_000867218.1;Parent=gene-CCO56_RS05085;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=CCO56_RS05085;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 324822 325049 . + . ID=gene-CCO56_RS05090;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=CCO56_RS05090;old_locus_tag=CCO56_05090 NZ_NPMB01000002.1 Protein Homology CDS 324822 325049 . + 0 ID=cds-WP_000844798.1;Parent=gene-CCO56_RS05090;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=CCO56_RS05090;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 325359 326174 . + . ID=gene-CCO56_RS05095;Name=CCO56_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05095;old_locus_tag=CCO56_05095 NZ_NPMB01000002.1 Protein Homology CDS 325359 326174 . + 0 ID=cds-WP_000948794.1;Parent=gene-CCO56_RS05095;Dbxref=GenBank:WP_000948794.1;Name=WP_000948794.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=CCO56_RS05095;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948794.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 326153 327865 . - . ID=gene-CCO56_RS05100;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=CCO56_RS05100;old_locus_tag=CCO56_05100 NZ_NPMB01000002.1 Protein Homology CDS 326153 327865 . - 0 ID=cds-WP_001119828.1;Parent=gene-CCO56_RS05100;Dbxref=GenBank:WP_001119828.1;Name=WP_001119828.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=CCO56_RS05100;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119828.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 328030 328215 . - . ID=gene-CCO56_RS05105;Name=CCO56_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05105;old_locus_tag=CCO56_05105 NZ_NPMB01000002.1 Protein Homology CDS 328030 328215 . - 0 ID=cds-WP_000232161.1;Parent=gene-CCO56_RS05105;Dbxref=GenBank:WP_000232161.1;Name=WP_000232161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=CCO56_RS05105;product=YodC family protein;protein_id=WP_000232161.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 328292 329209 . - . ID=gene-CCO56_RS05110;Name=CCO56_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05110;old_locus_tag=CCO56_05110 NZ_NPMB01000002.1 Protein Homology CDS 328292 329209 . - 0 ID=cds-WP_085920526.1;Parent=gene-CCO56_RS05110;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=CCO56_RS05110;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 329379 330299 . + . ID=gene-CCO56_RS05115;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=CCO56_RS05115;old_locus_tag=CCO56_05115 NZ_NPMB01000002.1 Protein Homology CDS 329379 330299 . + 0 ID=cds-WP_001212264.1;Parent=gene-CCO56_RS05115;Dbxref=GenBank:WP_001212264.1;Name=WP_001212264.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=CCO56_RS05115;product=drug/metabolite exporter YedA;protein_id=WP_001212264.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 330288 330758 . - . ID=gene-CCO56_RS05120;Name=CCO56_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05120;old_locus_tag=CCO56_05120 NZ_NPMB01000002.1 Protein Homology CDS 330288 330758 . - 0 ID=cds-WP_000785978.1;Parent=gene-CCO56_RS05120;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=CCO56_RS05120;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 330739 332169 . - . ID=gene-CCO56_RS05125;Name=CCO56_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05125;old_locus_tag=CCO56_05125 NZ_NPMB01000002.1 Protein Homology CDS 330739 332169 . - 0 ID=cds-WP_080177313.1;Parent=gene-CCO56_RS05125;Dbxref=GenBank:WP_080177313.1;Name=WP_080177313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=CCO56_RS05125;product=DNA cytosine methyltransferase;protein_id=WP_080177313.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 332243 332938 . - . ID=gene-CCO56_RS05130;Name=CCO56_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05130;old_locus_tag=CCO56_05130 NZ_NPMB01000002.1 Protein Homology CDS 332243 332938 . - 0 ID=cds-WP_080177314.1;Parent=gene-CCO56_RS05130;Dbxref=GenBank:WP_080177314.1;Name=WP_080177314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=CCO56_RS05130;product=phosphohydrolase;protein_id=WP_080177314.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 333030 333329 . - . ID=gene-CCO56_RS05135;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=CCO56_RS05135;old_locus_tag=CCO56_05135 NZ_NPMB01000002.1 Protein Homology CDS 333030 333329 . - 0 ID=cds-WP_000107430.1;Parent=gene-CCO56_RS05135;Dbxref=GenBank:WP_000107430.1;Name=WP_000107430.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=CCO56_RS05135;product=cell division protein DrpB;protein_id=WP_000107430.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 333979 335157 . + . ID=gene-CCO56_RS05140;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=CCO56_RS05140;old_locus_tag=CCO56_05140 NZ_NPMB01000002.1 Protein Homology CDS 333979 335157 . + 0 ID=cds-WP_015405879.1;Parent=gene-CCO56_RS05140;Dbxref=GenBank:WP_015405879.1;Name=WP_015405879.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=CCO56_RS05140;product=porin OmpS1;protein_id=WP_015405879.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 335418 335606 . - . ID=gene-CCO56_RS05145;Name=CCO56_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05145;old_locus_tag=CCO56_05145 NZ_NPMB01000002.1 Protein Homology CDS 335418 335606 . - 0 ID=cds-WP_024131109.1;Parent=gene-CCO56_RS05145;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=CCO56_RS05145;product=hypothetical protein;protein_id=WP_024131109.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 335617 335829 . - . ID=gene-CCO56_RS05150;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO56_RS05150;old_locus_tag=CCO56_05150 NZ_NPMB01000002.1 Protein Homology CDS 335617 335829 . - 0 ID=cds-WP_000208509.1;Parent=gene-CCO56_RS05150;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=CCO56_RS05150;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 336284 337552 . - . ID=gene-CCO56_RS05155;Name=CCO56_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05155;old_locus_tag=CCO56_05155 NZ_NPMB01000002.1 Protein Homology CDS 336284 337552 . - 0 ID=cds-WP_023207907.1;Parent=gene-CCO56_RS05155;Dbxref=GenBank:WP_023207907.1;Name=WP_023207907.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO56_RS05155;product=Y-family DNA polymerase;protein_id=WP_023207907.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 337555 337974 . - . ID=gene-CCO56_RS05160;Name=CCO56_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05160;old_locus_tag=CCO56_05160 NZ_NPMB01000002.1 Protein Homology CDS 337555 337974 . - 0 ID=cds-WP_000394197.1;Parent=gene-CCO56_RS05160;Dbxref=GenBank:WP_000394197.1;Name=WP_000394197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=CCO56_RS05160;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000394197.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 338565 338654 . - . ID=gene-CCO56_RS05175;Name=CCO56_RS05175;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS05175;old_locus_tag=CCO56_05175 NZ_NPMB01000002.1 tRNAscan-SE tRNA 338565 338654 . - . ID=rna-CCO56_RS05175;Parent=gene-CCO56_RS05175;anticodon=(pos:complement(338618..338620));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS05175;product=tRNA-Ser NZ_NPMB01000002.1 tRNAscan-SE exon 338565 338654 . - . ID=exon-CCO56_RS05175-1;Parent=rna-CCO56_RS05175;anticodon=(pos:complement(338618..338620));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS05175;product=tRNA-Ser NZ_NPMB01000002.1 RefSeq gene 338743 339540 . + . ID=gene-CCO56_RS05180;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=CCO56_RS05180;old_locus_tag=CCO56_05180 NZ_NPMB01000002.1 Protein Homology CDS 338743 339540 . + 0 ID=cds-WP_000598926.1;Parent=gene-CCO56_RS05180;Dbxref=GenBank:WP_000598926.1;Name=WP_000598926.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=CCO56_RS05180;product=DgsA anti-repressor MtfA;protein_id=WP_000598926.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 339641 339716 . + . ID=gene-CCO56_RS05185;Name=CCO56_RS05185;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS05185;old_locus_tag=CCO56_05185 NZ_NPMB01000002.1 tRNAscan-SE tRNA 339641 339716 . + . ID=rna-CCO56_RS05185;Parent=gene-CCO56_RS05185;anticodon=(pos:339674..339676);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS05185;product=tRNA-Asn NZ_NPMB01000002.1 tRNAscan-SE exon 339641 339716 . + . ID=exon-CCO56_RS05185-1;Parent=rna-CCO56_RS05185;anticodon=(pos:339674..339676);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS05185;product=tRNA-Asn NZ_NPMB01000002.1 RefSeq pseudogene 339884 340148 . + . ID=gene-CCO56_RS23680;Name=CCO56_RS23680;end_range=340148,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23680;old_locus_tag=CCO56_05190;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 339884 340148 . + 0 ID=cds-CCO56_RS23680;Parent=gene-CCO56_RS23680;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=340148,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743378.1;locus_tag=CCO56_RS23680;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 340317 340392 . + . ID=gene-CCO56_RS05195;Name=CCO56_RS05195;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS05195;old_locus_tag=CCO56_05195 NZ_NPMB01000002.1 tRNAscan-SE tRNA 340317 340392 . + . ID=rna-CCO56_RS05195;Parent=gene-CCO56_RS05195;anticodon=(pos:340350..340352);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS05195;product=tRNA-Asn NZ_NPMB01000002.1 tRNAscan-SE exon 340317 340392 . + . ID=exon-CCO56_RS05195-1;Parent=rna-CCO56_RS05195;anticodon=(pos:340350..340352);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS05195;product=tRNA-Asn NZ_NPMB01000002.1 RefSeq gene 340895 342349 . - . ID=gene-CCO56_RS05205;Name=CCO56_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05205;old_locus_tag=CCO56_05205 NZ_NPMB01000002.1 Protein Homology CDS 340895 342349 . - 0 ID=cds-WP_000428191.1;Parent=gene-CCO56_RS05205;Dbxref=GenBank:WP_000428191.1;Name=WP_000428191.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=CCO56_RS05205;product=AMP nucleosidase;protein_id=WP_000428191.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 342395 342556 . + . ID=gene-CCO56_RS05210;Name=CCO56_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05210;old_locus_tag=CCO56_05210 NZ_NPMB01000002.1 Protein Homology CDS 342395 342556 . + 0 ID=cds-WP_001531298.1;Parent=gene-CCO56_RS05210;Dbxref=GenBank:WP_001531298.1;Name=WP_001531298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=CCO56_RS05210;product=hypothetical protein;protein_id=WP_001531298.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 342545 342871 . - . ID=gene-CCO56_RS05215;Name=CCO56_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05215;old_locus_tag=CCO56_05215 NZ_NPMB01000002.1 Protein Homology CDS 342545 342871 . - 0 ID=cds-WP_000228161.1;Parent=gene-CCO56_RS05215;Dbxref=GenBank:WP_000228161.1;Name=WP_000228161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=CCO56_RS05215;product=DUF1493 family protein;protein_id=WP_000228161.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 342865 343330 . - . ID=gene-CCO56_RS05220;Name=CCO56_RS05220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS05220;old_locus_tag=CCO56_05220;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 342865 343330 . - 0 ID=cds-CCO56_RS05220;Parent=gene-CCO56_RS05220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=CCO56_RS05220;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 343752 343827 . - . ID=gene-CCO56_RS05230;Name=CCO56_RS05230;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS05230;old_locus_tag=CCO56_05230 NZ_NPMB01000002.1 tRNAscan-SE tRNA 343752 343827 . - . ID=rna-CCO56_RS05230;Parent=gene-CCO56_RS05230;anticodon=(pos:complement(343792..343794));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS05230;product=tRNA-Asn NZ_NPMB01000002.1 tRNAscan-SE exon 343752 343827 . - . ID=exon-CCO56_RS05230-1;Parent=rna-CCO56_RS05230;anticodon=(pos:complement(343792..343794));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS05230;product=tRNA-Asn NZ_NPMB01000002.1 RefSeq gene 343968 345425 . - . ID=gene-CCO56_RS05235;Name=CCO56_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05235;old_locus_tag=CCO56_05235 NZ_NPMB01000002.1 Protein Homology CDS 343968 345425 . - 0 ID=cds-WP_058111844.1;Parent=gene-CCO56_RS05235;Dbxref=GenBank:WP_058111844.1;Name=WP_058111844.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=CCO56_RS05235;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_058111844.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 345585 345660 . + . ID=gene-CCO56_RS05240;Name=CCO56_RS05240;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS05240;old_locus_tag=CCO56_05240 NZ_NPMB01000002.1 tRNAscan-SE tRNA 345585 345660 . + . ID=rna-CCO56_RS05240;Parent=gene-CCO56_RS05240;anticodon=(pos:345618..345620);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS05240;product=tRNA-Asn NZ_NPMB01000002.1 tRNAscan-SE exon 345585 345660 . + . ID=exon-CCO56_RS05240-1;Parent=rna-CCO56_RS05240;anticodon=(pos:345618..345620);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS05240;product=tRNA-Asn NZ_NPMB01000002.1 RefSeq pseudogene 345822 347077 . + . ID=gene-CCO56_RS05245;Name=CCO56_RS05245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS05245;old_locus_tag=CCO56_05245;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 345822 347077 . + 0 ID=cds-CCO56_RS05245;Parent=gene-CCO56_RS05245;Note=frameshifted%3B internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899245.1;locus_tag=CCO56_RS05245;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 347778 347975 . + . ID=gene-CCO56_RS23690;Name=CCO56_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23690 NZ_NPMB01000002.1 Protein Homology CDS 347778 347975 . + 0 ID=cds-WP_228012300.1;Parent=gene-CCO56_RS23690;Dbxref=GenBank:WP_228012300.1;Name=WP_228012300.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012354.6;locus_tag=CCO56_RS23690;product=LysR family transcriptional regulator;protein_id=WP_228012300.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 348115 348657 . + . ID=gene-CCO56_RS23695;Name=CCO56_RS23695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23695;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 348115 348657 . + 0 ID=cds-CCO56_RS23695;Parent=gene-CCO56_RS23695;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=CCO56_RS23695;product=LysR family transcriptional regulator substrate-binding protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 348807 349802 . - . ID=gene-CCO56_RS05255;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=CCO56_RS05255;old_locus_tag=CCO56_05255 NZ_NPMB01000002.1 Protein Homology CDS 348807 349802 . - 0 ID=cds-WP_080177266.1;Parent=gene-CCO56_RS05255;Dbxref=GenBank:WP_080177266.1;Name=WP_080177266.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=CCO56_RS05255;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_080177266.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 349890 350852 . - . ID=gene-CCO56_RS05260;Name=CCO56_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05260;old_locus_tag=CCO56_05260 NZ_NPMB01000002.1 Protein Homology CDS 349890 350852 . - 0 ID=cds-WP_001530996.1;Parent=gene-CCO56_RS05260;Dbxref=GenBank:WP_001530996.1;Name=WP_001530996.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530996.1;locus_tag=CCO56_RS05260;product=DMT family transporter;protein_id=WP_001530996.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 350975 352471 . - . ID=gene-CCO56_RS05265;Name=CCO56_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05265;old_locus_tag=CCO56_05265 NZ_NPMB01000002.1 Protein Homology CDS 350975 352471 . - 0 ID=cds-WP_000631806.1;Parent=gene-CCO56_RS05265;Dbxref=GenBank:WP_000631806.1;Name=WP_000631806.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631807.1;locus_tag=CCO56_RS05265;product=class I adenylate-forming enzyme family protein;protein_id=WP_000631806.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 352506 353105 . - . ID=gene-CCO56_RS23955;Name=CCO56_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23955 NZ_NPMB01000002.1 GeneMarkS-2+ CDS 352506 353105 . - 0 ID=cds-WP_254893339.1;Parent=gene-CCO56_RS23955;Dbxref=GenBank:WP_254893339.1;Name=WP_254893339.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS23955;product=hypothetical protein;protein_id=WP_254893339.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 353084 353887 . - . ID=gene-CCO56_RS23960;Name=CCO56_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23960 NZ_NPMB01000002.1 Protein Homology CDS 353084 353887 . - 0 ID=cds-WP_254893340.1;Parent=gene-CCO56_RS23960;Dbxref=GenBank:WP_254893340.1;Name=WP_254893340.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF013444.6;locus_tag=CCO56_RS23960;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_254893340.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 354344 354607 . - . ID=gene-CCO56_RS05275;Name=CCO56_RS05275;end_range=354607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS05275;old_locus_tag=CCO56_05275;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 354344 354607 . - 0 ID=cds-CCO56_RS05275;Parent=gene-CCO56_RS05275;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=354607,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511771.1;locus_tag=CCO56_RS05275;partial=true;product=integrase domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 354739 354852 . + . ID=gene-CCO56_RS24095;Name=CCO56_RS24095;end_range=354852,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24095;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 354739 354852 . + 0 ID=cds-CCO56_RS24095;Parent=gene-CCO56_RS24095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=354852,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001560542.1;locus_tag=CCO56_RS24095;partial=true;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 355044 355973 . - . ID=gene-CCO56_RS05280;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=CCO56_RS05280;old_locus_tag=CCO56_05280 NZ_NPMB01000002.1 Protein Homology CDS 355044 355973 . - 0 ID=cds-WP_080177267.1;Parent=gene-CCO56_RS05280;Dbxref=GenBank:WP_080177267.1;Name=WP_080177267.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=CCO56_RS05280;product=L%2CD-transpeptidase;protein_id=WP_080177267.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 356051 357121 . - . ID=gene-CCO56_RS05285;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CCO56_RS05285;old_locus_tag=CCO56_05285 NZ_NPMB01000002.1 Protein Homology CDS 356051 357121 . - 0 ID=cds-WP_024155260.1;Parent=gene-CCO56_RS05285;Dbxref=GenBank:WP_024155260.1;Name=WP_024155260.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=CCO56_RS05285;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_024155260.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 357148 357891 . - . ID=gene-CCO56_RS05290;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=CCO56_RS05290;old_locus_tag=CCO56_05290 NZ_NPMB01000002.1 Protein Homology CDS 357148 357891 . - 0 ID=cds-WP_024155261.1;Parent=gene-CCO56_RS05290;Dbxref=GenBank:WP_024155261.1;Name=WP_024155261.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=CCO56_RS05290;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_024155261.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 357888 358433 . - . ID=gene-CCO56_RS05295;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=CCO56_RS05295;old_locus_tag=CCO56_05295 NZ_NPMB01000002.1 Protein Homology CDS 357888 358433 . - 0 ID=cds-WP_000973188.1;Parent=gene-CCO56_RS05295;Dbxref=GenBank:WP_000973188.1;Name=WP_000973188.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=CCO56_RS05295;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973188.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 358430 359950 . - . ID=gene-CCO56_RS05300;Name=CCO56_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05300;old_locus_tag=CCO56_05300 NZ_NPMB01000002.1 Protein Homology CDS 358430 359950 . - 0 ID=cds-WP_080177268.1;Parent=gene-CCO56_RS05300;Dbxref=GenBank:WP_080177268.1;Name=WP_080177268.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=CCO56_RS05300;product=cobyric acid synthase;protein_id=WP_080177268.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 359947 360762 . - . ID=gene-CCO56_RS05305;Name=CCO56_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05305;old_locus_tag=CCO56_05305 NZ_NPMB01000002.1 Protein Homology CDS 359947 360762 . - 0 ID=cds-WP_000881544.1;Parent=gene-CCO56_RS05305;Dbxref=GenBank:WP_000881544.1;Name=WP_000881544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=CCO56_RS05305;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881544.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 360771 361448 . - . ID=gene-CCO56_RS05310;Name=CCO56_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05310;old_locus_tag=CCO56_05310 NZ_NPMB01000002.1 Protein Homology CDS 360771 361448 . - 0 ID=cds-WP_000147135.1;Parent=gene-CCO56_RS05310;Dbxref=GenBank:WP_000147135.1;Name=WP_000147135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=CCO56_RS05310;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_000147135.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 361435 361716 . - . ID=gene-CCO56_RS05315;Name=CCO56_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05315;old_locus_tag=CCO56_05315 NZ_NPMB01000002.1 Protein Homology CDS 361435 361716 . - 0 ID=cds-WP_000753212.1;Parent=gene-CCO56_RS05315;Dbxref=GenBank:WP_000753212.1;Name=WP_000753212.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=CCO56_RS05315;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753212.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 361718 362455 . - . ID=gene-CCO56_RS05320;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=CCO56_RS05320;old_locus_tag=CCO56_05320 NZ_NPMB01000002.1 Protein Homology CDS 361718 362455 . - 0 ID=cds-WP_000764336.1;Parent=gene-CCO56_RS05320;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=CCO56_RS05320;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 362452 363165 . - . ID=gene-CCO56_RS05325;Name=CCO56_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05325;old_locus_tag=CCO56_05325 NZ_NPMB01000002.1 Protein Homology CDS 362452 363165 . - 0 ID=cds-WP_001013552.1;Parent=gene-CCO56_RS05325;Dbxref=GenBank:WP_001013552.1;Name=WP_001013552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=CCO56_RS05325;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013552.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 363162 363956 . - . ID=gene-CCO56_RS05330;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=CCO56_RS05330;old_locus_tag=CCO56_05330 NZ_NPMB01000002.1 Protein Homology CDS 363162 363956 . - 0 ID=cds-WP_000709789.1;Parent=gene-CCO56_RS05330;Dbxref=GenBank:WP_000709789.1;Name=WP_000709789.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=CCO56_RS05330;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709789.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 363959 364750 . - . ID=gene-CCO56_RS05335;Name=CCO56_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05335;old_locus_tag=CCO56_05335 NZ_NPMB01000002.1 Protein Homology CDS 363959 364750 . - 0 ID=cds-WP_080177269.1;Parent=gene-CCO56_RS05335;Dbxref=GenBank:WP_080177269.1;Name=WP_080177269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=CCO56_RS05335;product=cobalt-precorrin-6A reductase;protein_id=WP_080177269.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 364747 365472 . - . ID=gene-CCO56_RS05340;Name=CCO56_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05340;old_locus_tag=CCO56_05340 NZ_NPMB01000002.1 Protein Homology CDS 364747 365472 . - 0 ID=cds-WP_000953637.1;Parent=gene-CCO56_RS05340;Dbxref=GenBank:WP_000953637.1;Name=WP_000953637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=CCO56_RS05340;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953637.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 365472 366527 . - . ID=gene-CCO56_RS05345;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=CCO56_RS05345;old_locus_tag=CCO56_05345 NZ_NPMB01000002.1 Protein Homology CDS 365472 366527 . - 0 ID=cds-WP_080177270.1;Parent=gene-CCO56_RS05345;Dbxref=GenBank:WP_080177270.1;Name=WP_080177270.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=CCO56_RS05345;product=cobalt-precorrin 5A hydrolase;protein_id=WP_080177270.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 366508 367281 . - . ID=gene-CCO56_RS05350;Name=CCO56_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05350;old_locus_tag=CCO56_05350 NZ_NPMB01000002.1 Protein Homology CDS 366508 367281 . - 0 ID=cds-WP_000004858.1;Parent=gene-CCO56_RS05350;Dbxref=GenBank:WP_000004858.1;Name=WP_000004858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=CCO56_RS05350;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_000004858.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 367265 367843 . - . ID=gene-CCO56_RS05355;Name=CCO56_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05355;old_locus_tag=CCO56_05355 NZ_NPMB01000002.1 Protein Homology CDS 367265 367843 . - 0 ID=cds-WP_000650985.1;Parent=gene-CCO56_RS05355;Dbxref=GenBank:WP_000650985.1;Name=WP_000650985.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=CCO56_RS05355;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650985.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 367833 368438 . - . ID=gene-CCO56_RS05360;Name=CCO56_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05360;old_locus_tag=CCO56_05360 NZ_NPMB01000002.1 Protein Homology CDS 367833 368438 . - 0 ID=cds-WP_080177271.1;Parent=gene-CCO56_RS05360;Dbxref=GenBank:WP_080177271.1;Name=WP_080177271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=CCO56_RS05360;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_080177271.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 368432 369571 . - . ID=gene-CCO56_RS05365;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=CCO56_RS05365;old_locus_tag=CCO56_05365 NZ_NPMB01000002.1 Protein Homology CDS 368432 369571 . - 0 ID=cds-WP_061383542.1;Parent=gene-CCO56_RS05365;Dbxref=GenBank:WP_061383542.1;Name=WP_061383542.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=CCO56_RS05365;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_061383542.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 369571 370203 . - . ID=gene-CCO56_RS05370;Name=CCO56_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05370;old_locus_tag=CCO56_05370 NZ_NPMB01000002.1 Protein Homology CDS 369571 370203 . - 0 ID=cds-WP_000558993.1;Parent=gene-CCO56_RS05370;Dbxref=GenBank:WP_000558993.1;Name=WP_000558993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=CCO56_RS05370;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558993.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 370214 371173 . - . ID=gene-CCO56_RS05375;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=CCO56_RS05375;old_locus_tag=CCO56_05375 NZ_NPMB01000002.1 Protein Homology CDS 370214 371173 . - 0 ID=cds-WP_000153660.1;Parent=gene-CCO56_RS05375;Dbxref=GenBank:WP_000153660.1;Name=WP_000153660.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=CCO56_RS05375;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153660.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 371170 372549 . - . ID=gene-CCO56_RS05380;Name=CCO56_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05380;old_locus_tag=CCO56_05380 NZ_NPMB01000002.1 Protein Homology CDS 371170 372549 . - 0 ID=cds-WP_080177272.1;Parent=gene-CCO56_RS05380;Dbxref=GenBank:WP_080177272.1;Name=WP_080177272.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=CCO56_RS05380;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_080177272.1;transl_table=11 NZ_NPMB01000002.1 cmsearch riboswitch 372647 372821 . - . ID=id-NZ_NPMB01000002.1:372647..372821;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMB01000002.1 RefSeq gene 373147 374058 . - . ID=gene-CCO56_RS05385;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=CCO56_RS05385;old_locus_tag=CCO56_05385 NZ_NPMB01000002.1 Protein Homology CDS 373147 374058 . - 0 ID=cds-WP_000622326.1;Parent=gene-CCO56_RS05385;Dbxref=GenBank:WP_000622326.1;Name=WP_000622326.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=CCO56_RS05385;product=transcriptional regulator PocR;protein_id=WP_000622326.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 374275 375069 . - . ID=gene-CCO56_RS05390;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=CCO56_RS05390;old_locus_tag=CCO56_05390 NZ_NPMB01000002.1 Protein Homology CDS 374275 375069 . - 0 ID=cds-WP_001645027.1;Parent=gene-CCO56_RS05390;Dbxref=GenBank:WP_001645027.1;Name=WP_001645027.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=CCO56_RS05390;product=propanediol diffusion facilitator PduF;protein_id=WP_001645027.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 375594 375878 . + . ID=gene-CCO56_RS05395;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=CCO56_RS05395;old_locus_tag=CCO56_05395 NZ_NPMB01000002.1 Protein Homology CDS 375594 375878 . + 0 ID=cds-WP_001183618.1;Parent=gene-CCO56_RS05395;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=CCO56_RS05395;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 375875 376687 . + . ID=gene-CCO56_RS05400;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=CCO56_RS05400;old_locus_tag=CCO56_05400 NZ_NPMB01000002.1 Protein Homology CDS 375875 376687 . + 0 ID=cds-WP_000097497.1;Parent=gene-CCO56_RS05400;Dbxref=GenBank:WP_000097497.1;Name=WP_000097497.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=CCO56_RS05400;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097497.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 376706 378370 . + . ID=gene-CCO56_RS05405;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=CCO56_RS05405;old_locus_tag=CCO56_05405 NZ_NPMB01000002.1 Protein Homology CDS 376706 378370 . + 0 ID=cds-WP_001256896.1;Parent=gene-CCO56_RS05405;Dbxref=GenBank:WP_001256896.1;Name=WP_001256896.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=CCO56_RS05405;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256896.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 378381 379055 . + . ID=gene-CCO56_RS05410;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=CCO56_RS05410;old_locus_tag=CCO56_05410 NZ_NPMB01000002.1 Protein Homology CDS 378381 379055 . + 0 ID=cds-WP_000405048.1;Parent=gene-CCO56_RS05410;Dbxref=GenBank:WP_000405048.1;Name=WP_000405048.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=CCO56_RS05410;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405048.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 379070 379591 . + . ID=gene-CCO56_RS05415;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=CCO56_RS05415;old_locus_tag=CCO56_05415 NZ_NPMB01000002.1 Protein Homology CDS 379070 379591 . + 0 ID=cds-WP_001090597.1;Parent=gene-CCO56_RS05415;Dbxref=GenBank:WP_001090597.1;Name=WP_001090597.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=CCO56_RS05415;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090597.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 379601 381433 . + . ID=gene-CCO56_RS05420;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=CCO56_RS05420;old_locus_tag=CCO56_05420 NZ_NPMB01000002.1 Protein Homology CDS 379601 381433 . + 0 ID=cds-WP_023213493.1;Parent=gene-CCO56_RS05420;Dbxref=GenBank:WP_023213493.1;Name=WP_023213493.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=CCO56_RS05420;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_023213493.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 381423 381773 . + . ID=gene-CCO56_RS05425;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=CCO56_RS05425;old_locus_tag=CCO56_05425 NZ_NPMB01000002.1 Protein Homology CDS 381423 381773 . + 0 ID=cds-WP_000377980.1;Parent=gene-CCO56_RS05425;Dbxref=GenBank:WP_000377980.1;Name=WP_000377980.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=CCO56_RS05425;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377980.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 381792 382067 . + . ID=gene-CCO56_RS05430;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=CCO56_RS05430;old_locus_tag=CCO56_05430 NZ_NPMB01000002.1 Protein Homology CDS 381792 382067 . + 0 ID=cds-WP_001057755.1;Parent=gene-CCO56_RS05430;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=CCO56_RS05430;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 382071 382553 . + . ID=gene-CCO56_RS05435;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=CCO56_RS05435;old_locus_tag=CCO56_05435 NZ_NPMB01000002.1 Protein Homology CDS 382071 382553 . + 0 ID=cds-WP_077948951.1;Parent=gene-CCO56_RS05435;Dbxref=GenBank:WP_077948951.1;Name=WP_077948951.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=CCO56_RS05435;product=propanediol utilization microcompartment protein PduK;protein_id=WP_077948951.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 382553 383185 . + . ID=gene-CCO56_RS05440;Name=CCO56_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05440;old_locus_tag=CCO56_05440 NZ_NPMB01000002.1 Protein Homology CDS 382553 383185 . + 0 ID=cds-WP_061377774.1;Parent=gene-CCO56_RS05440;Dbxref=GenBank:WP_061377774.1;Name=WP_061377774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=CCO56_RS05440;product=phosphate propanoyltransferase;protein_id=WP_061377774.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 383182 383673 . + . ID=gene-CCO56_RS05445;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=CCO56_RS05445;old_locus_tag=CCO56_05445 NZ_NPMB01000002.1 Protein Homology CDS 383182 383673 . + 0 ID=cds-WP_001012959.1;Parent=gene-CCO56_RS05445;Dbxref=GenBank:WP_001012959.1;Name=WP_001012959.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=CCO56_RS05445;product=propanediol utilization microcompartment protein PduM;protein_id=WP_001012959.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 383677 383952 . + . ID=gene-CCO56_RS05450;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=CCO56_RS05450;old_locus_tag=CCO56_05450 NZ_NPMB01000002.1 Protein Homology CDS 383677 383952 . + 0 ID=cds-WP_000549823.1;Parent=gene-CCO56_RS05450;Dbxref=GenBank:WP_000549823.1;Name=WP_000549823.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=CCO56_RS05450;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549823.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 383962 384972 . + . ID=gene-CCO56_RS05455;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=CCO56_RS05455;old_locus_tag=CCO56_05455 NZ_NPMB01000002.1 Protein Homology CDS 383962 384972 . + 0 ID=cds-WP_001029478.1;Parent=gene-CCO56_RS05455;Dbxref=GenBank:WP_001029478.1;Name=WP_001029478.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=CCO56_RS05455;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_001029478.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 384969 386363 . + . ID=gene-CCO56_RS05460;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=CCO56_RS05460;old_locus_tag=CCO56_05460 NZ_NPMB01000002.1 Protein Homology CDS 384969 386363 . + 0 ID=cds-WP_001097675.1;Parent=gene-CCO56_RS05460;Dbxref=GenBank:WP_001097675.1;Name=WP_001097675.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=CCO56_RS05460;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_001097675.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 386375 387487 . + . ID=gene-CCO56_RS05465;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=CCO56_RS05465;old_locus_tag=CCO56_05465 NZ_NPMB01000002.1 Protein Homology CDS 386375 387487 . + 0 ID=cds-WP_001091458.1;Parent=gene-CCO56_RS05465;Dbxref=GenBank:WP_001091458.1;Name=WP_001091458.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=CCO56_RS05465;product=1-propanol dehydrogenase PduQ;protein_id=WP_001091458.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 387484 388839 . + . ID=gene-CCO56_RS05470;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=CCO56_RS05470;old_locus_tag=CCO56_05470 NZ_NPMB01000002.1 Protein Homology CDS 387484 388839 . + 0 ID=cds-WP_001271296.1;Parent=gene-CCO56_RS05470;Dbxref=GenBank:WP_001271296.1;Name=WP_001271296.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=CCO56_RS05470;product=cobalamin reductase PduS;protein_id=WP_001271296.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 388842 389396 . + . ID=gene-CCO56_RS05475;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=CCO56_RS05475;old_locus_tag=CCO56_05475 NZ_NPMB01000002.1 Protein Homology CDS 388842 389396 . + 0 ID=cds-WP_000075777.1;Parent=gene-CCO56_RS05475;Dbxref=GenBank:WP_000075777.1;Name=WP_000075777.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=CCO56_RS05475;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075777.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 389396 389746 . + . ID=gene-CCO56_RS05480;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=CCO56_RS05480;old_locus_tag=CCO56_05480 NZ_NPMB01000002.1 Protein Homology CDS 389396 389746 . + 0 ID=cds-WP_000441103.1;Parent=gene-CCO56_RS05480;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=CCO56_RS05480;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 389751 390203 . + . ID=gene-CCO56_RS05485;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=CCO56_RS05485;old_locus_tag=CCO56_05485 NZ_NPMB01000002.1 Protein Homology CDS 389751 390203 . + 0 ID=cds-WP_000826270.1;Parent=gene-CCO56_RS05485;Dbxref=GenBank:WP_000826270.1;Name=WP_000826270.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=CCO56_RS05485;product=propanediol utilization protein PduV;protein_id=WP_000826270.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 390188 391402 . + . ID=gene-CCO56_RS05490;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=CCO56_RS05490;old_locus_tag=CCO56_05490 NZ_NPMB01000002.1 Protein Homology CDS 390188 391402 . + 0 ID=cds-WP_000120646.1;Parent=gene-CCO56_RS05490;Dbxref=GenBank:WP_000120646.1;Name=WP_000120646.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=CCO56_RS05490;product=propanediol utilization propionate kinase PduW;protein_id=WP_000120646.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 391496 392362 . + . ID=gene-CCO56_RS05495;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=CCO56_RS05495;old_locus_tag=CCO56_05495 NZ_NPMB01000002.1 Protein Homology CDS 391496 392362 . + 0 ID=cds-WP_001518728.1;Parent=gene-CCO56_RS05495;Dbxref=GenBank:WP_001518728.1;Name=WP_001518728.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=CCO56_RS05495;product=L-threonine kinase PduX;protein_id=WP_001518728.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 392396 392731 . - . ID=gene-CCO56_RS05500;Name=CCO56_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05500;old_locus_tag=CCO56_05500 NZ_NPMB01000002.1 Protein Homology CDS 392396 392731 . - 0 ID=cds-WP_000450405.1;Parent=gene-CCO56_RS05500;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=CCO56_RS05500;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 392976 394034 . - . ID=gene-CCO56_RS05505;Name=CCO56_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05505;old_locus_tag=CCO56_05505 NZ_NPMB01000002.1 Protein Homology CDS 392976 394034 . - 0 ID=cds-WP_023217287.1;Parent=gene-CCO56_RS05505;Dbxref=GenBank:WP_023217287.1;Name=WP_023217287.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=CCO56_RS05505;product=FUSC family protein;protein_id=WP_023217287.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 394153 394620 . - . ID=gene-CCO56_RS05515;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=CCO56_RS05515;old_locus_tag=CCO56_05515 NZ_NPMB01000002.1 Protein Homology CDS 394153 394620 . - 0 ID=cds-WP_000384326.1;Parent=gene-CCO56_RS05515;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=CCO56_RS05515;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 394771 395943 . - . ID=gene-CCO56_RS05520;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=CCO56_RS05520;old_locus_tag=CCO56_05520 NZ_NPMB01000002.1 Protein Homology CDS 394771 395943 . - 0 ID=cds-WP_000925038.1;Parent=gene-CCO56_RS05520;Dbxref=GenBank:WP_000925038.1;Name=WP_000925038.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=CCO56_RS05520;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000925038.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 396067 396831 . - . ID=gene-CCO56_RS05525;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=CCO56_RS05525;old_locus_tag=CCO56_05525 NZ_NPMB01000002.1 Protein Homology CDS 396067 396831 . - 0 ID=cds-WP_001092558.1;Parent=gene-CCO56_RS05525;Dbxref=GenBank:WP_001092558.1;Name=WP_001092558.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=CCO56_RS05525;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092558.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 396828 397406 . - . ID=gene-CCO56_RS05530;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=CCO56_RS05530;old_locus_tag=CCO56_05530 NZ_NPMB01000002.1 Protein Homology CDS 396828 397406 . - 0 ID=cds-WP_001016236.1;Parent=gene-CCO56_RS05530;Dbxref=GenBank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=CCO56_RS05530;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 397421 399697 . - . ID=gene-CCO56_RS05535;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=CCO56_RS05535;old_locus_tag=CCO56_05535 NZ_NPMB01000002.1 Protein Homology CDS 397421 399697 . - 0 ID=cds-WP_080177185.1;Parent=gene-CCO56_RS05535;Dbxref=GenBank:WP_080177185.1;Name=WP_080177185.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=CCO56_RS05535;product=thiosulfate reductase PhsA;protein_id=WP_080177185.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 399956 400049 . - . ID=gene-CCO56_RS23530;Name=CCO56_RS23530;end_range=400049,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23530;partial=true;pseudo=true;start_range=.,399956 NZ_NPMB01000002.1 Protein Homology CDS 399956 400049 . - 0 ID=cds-CCO56_RS23530;Parent=gene-CCO56_RS23530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=400049,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO56_RS23530;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,399956;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 400317 402665 . + . ID=gene-CCO56_RS05545;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=CCO56_RS05545;old_locus_tag=CCO56_05545 NZ_NPMB01000002.1 Protein Homology CDS 400317 402665 . + 0 ID=cds-WP_000704007.1;Parent=gene-CCO56_RS05545;Dbxref=GenBank:WP_000704007.1;Name=WP_000704007.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=CCO56_RS05545;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_000704007.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 402795 402872 . - . ID=gene-CCO56_RS23700;Name=CCO56_RS23700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23700;partial=true;pseudo=true;start_range=.,402795 NZ_NPMB01000002.1 Protein Homology CDS 402795 402872 . - 0 ID=cds-CCO56_RS23700;Parent=gene-CCO56_RS23700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=CCO56_RS23700;partial=true;product=hypothetical protein;pseudo=true;start_range=.,402795;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 403008 404438 . + . ID=gene-CCO56_RS05550;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=CCO56_RS05550;old_locus_tag=CCO56_05550 NZ_NPMB01000002.1 Protein Homology CDS 403008 404438 . + 0 ID=cds-WP_000216699.1;Parent=gene-CCO56_RS05550;Dbxref=GenBank:WP_000216699.1;Name=WP_000216699.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=CCO56_RS05550;product=exodeoxyribonuclease I;protein_id=WP_000216699.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 404574 405932 . - . ID=gene-CCO56_RS05555;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=CCO56_RS05555;old_locus_tag=CCO56_05555 NZ_NPMB01000002.1 Protein Homology CDS 404574 405932 . - 0 ID=cds-WP_001519005.1;Parent=gene-CCO56_RS05555;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=CCO56_RS05555;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 405922 405984 . - . ID=gene-CCO56_RS23320;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=CCO56_RS23320 NZ_NPMB01000002.1 Protein Homology CDS 405922 405984 . - 0 ID=cds-WP_096335044.1;Parent=gene-CCO56_RS23320;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=CCO56_RS23320;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 406218 407132 . - . ID=gene-CCO56_RS05560;Name=CCO56_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05560;old_locus_tag=CCO56_05560 NZ_NPMB01000002.1 Protein Homology CDS 406218 407132 . - 0 ID=cds-WP_000803384.1;Parent=gene-CCO56_RS05560;Dbxref=GenBank:WP_000803384.1;Name=WP_000803384.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=CCO56_RS05560;product=LysR family transcriptional regulator;protein_id=WP_000803384.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 407178 408002 . - . ID=gene-CCO56_RS05565;Name=CCO56_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05565;old_locus_tag=CCO56_05565 NZ_NPMB01000002.1 Protein Homology CDS 407178 408002 . - 0 ID=cds-WP_000754712.1;Parent=gene-CCO56_RS05565;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=CCO56_RS05565;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 408165 408215 . + . ID=gene-CCO56_RS05570;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=CCO56_RS05570;old_locus_tag=CCO56_05570 NZ_NPMB01000002.1 Protein Homology CDS 408165 408215 . + 0 ID=cds-WP_001364200.1;Parent=gene-CCO56_RS05570;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=CCO56_RS05570;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_NPMB01000002.1 cmsearch sequence_feature 408191 408314 . + . ID=id-NZ_NPMB01000002.1:408191..408314;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMB01000002.1 RefSeq gene 408361 409260 . + . ID=gene-CCO56_RS05575;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CCO56_RS05575;old_locus_tag=CCO56_05575 NZ_NPMB01000002.1 Protein Homology CDS 408361 409260 . + 0 ID=cds-WP_000886599.1;Parent=gene-CCO56_RS05575;Dbxref=GenBank:WP_000886599.1;Name=WP_000886599.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=CCO56_RS05575;product=ATP phosphoribosyltransferase;protein_id=WP_000886599.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 409363 410667 . + . ID=gene-CCO56_RS05580;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CCO56_RS05580;old_locus_tag=CCO56_05580 NZ_NPMB01000002.1 Protein Homology CDS 409363 410667 . + 0 ID=cds-WP_000009617.1;Parent=gene-CCO56_RS05580;Dbxref=GenBank:WP_000009617.1;Name=WP_000009617.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=CCO56_RS05580;product=histidinol dehydrogenase;protein_id=WP_000009617.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 410664 411743 . + . ID=gene-CCO56_RS05585;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CCO56_RS05585;old_locus_tag=CCO56_05585 NZ_NPMB01000002.1 Protein Homology CDS 410664 411743 . + 0 ID=cds-WP_000102715.1;Parent=gene-CCO56_RS05585;Dbxref=GenBank:WP_000102715.1;Name=WP_000102715.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=CCO56_RS05585;product=histidinol-phosphate transaminase;protein_id=WP_000102715.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 411740 412807 . + . ID=gene-CCO56_RS05590;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CCO56_RS05590;old_locus_tag=CCO56_05590 NZ_NPMB01000002.1 Protein Homology CDS 411740 412807 . + 0 ID=cds-WP_000080051.1;Parent=gene-CCO56_RS05590;Dbxref=GenBank:WP_000080051.1;Name=WP_000080051.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=CCO56_RS05590;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080051.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 412807 413397 . + . ID=gene-CCO56_RS05595;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CCO56_RS05595;old_locus_tag=CCO56_05595 NZ_NPMB01000002.1 Protein Homology CDS 412807 413397 . + 0 ID=cds-WP_001103591.1;Parent=gene-CCO56_RS05595;Dbxref=GenBank:WP_001103591.1;Name=WP_001103591.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=CCO56_RS05595;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103591.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 413397 414134 . + . ID=gene-CCO56_RS05600;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CCO56_RS05600;old_locus_tag=CCO56_05600 NZ_NPMB01000002.1 Protein Homology CDS 413397 414134 . + 0 ID=cds-WP_000586408.1;Parent=gene-CCO56_RS05600;Dbxref=GenBank:WP_000586408.1;Name=WP_000586408.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=CCO56_RS05600;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586408.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 414116 414892 . + . ID=gene-CCO56_RS05605;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CCO56_RS05605;old_locus_tag=CCO56_05605 NZ_NPMB01000002.1 Protein Homology CDS 414116 414892 . + 0 ID=cds-WP_000880125.1;Parent=gene-CCO56_RS05605;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=CCO56_RS05605;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 414886 415497 . + . ID=gene-CCO56_RS05610;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CCO56_RS05610;old_locus_tag=CCO56_05610 NZ_NPMB01000002.1 Protein Homology CDS 414886 415497 . + 0 ID=cds-WP_080177184.1;Parent=gene-CCO56_RS05610;Dbxref=GenBank:WP_080177184.1;Name=WP_080177184.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=CCO56_RS05610;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_080177184.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 415579 416562 . - . ID=gene-CCO56_RS05615;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=CCO56_RS05615;old_locus_tag=CCO56_05615 NZ_NPMB01000002.1 Protein Homology CDS 415579 416562 . - 0 ID=cds-WP_000215265.1;Parent=gene-CCO56_RS05615;Dbxref=GenBank:WP_000215265.1;Name=WP_000215265.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=CCO56_RS05615;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_000215265.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 416705 417871 . - . ID=gene-CCO56_RS05620;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=CCO56_RS05620;old_locus_tag=CCO56_05620 NZ_NPMB01000002.1 Protein Homology CDS 416705 417871 . - 0 ID=cds-WP_000704821.1;Parent=gene-CCO56_RS05620;Dbxref=GenBank:WP_000704821.1;Name=WP_000704821.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=CCO56_RS05620;product=UDP-glucose 6-dehydrogenase;protein_id=WP_000704821.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 418107 419513 . - . ID=gene-CCO56_RS05630;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=CCO56_RS05630;old_locus_tag=CCO56_05630 NZ_NPMB01000002.1 Protein Homology CDS 418107 419513 . - 0 ID=cds-WP_000043533.1;Parent=gene-CCO56_RS05630;Dbxref=GenBank:WP_000043533.1;Name=WP_000043533.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=CCO56_RS05630;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043533.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 419726 419980 . - . ID=gene-CCO56_RS05635;Name=CCO56_RS05635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS05635;old_locus_tag=CCO56_05635;partial=true;pseudo=true;start_range=.,419726 NZ_NPMB01000002.1 Protein Homology CDS 419726 419980 . - 0 ID=cds-CCO56_RS05635;Parent=gene-CCO56_RS05635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146066.1;locus_tag=CCO56_RS05635;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,419726;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 420023 421276 . - . ID=gene-CCO56_RS05640;Name=CCO56_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05640;old_locus_tag=CCO56_05640 NZ_NPMB01000002.1 Protein Homology CDS 420023 421276 . - 0 ID=cds-WP_080177183.1;Parent=gene-CCO56_RS05640;Dbxref=GenBank:WP_080177183.1;Name=WP_080177183.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001544688.1;locus_tag=CCO56_RS05640;product=lipopolysaccharide biosynthesis protein;protein_id=WP_080177183.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 421273 422616 . - . ID=gene-CCO56_RS05645;Name=CCO56_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05645;old_locus_tag=CCO56_05645 NZ_NPMB01000002.1 Protein Homology CDS 421273 422616 . - 0 ID=cds-WP_080177182.1;Parent=gene-CCO56_RS05645;Dbxref=GenBank:WP_080177182.1;Name=WP_080177182.1;Ontology_term=GO:0008755,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=O antigen polymerase activity|0008755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000549529.1;locus_tag=CCO56_RS05645;product=O-antigen polymerase;protein_id=WP_080177182.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 422772 424199 . - . ID=gene-CCO56_RS05650;Name=CCO56_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05650;old_locus_tag=CCO56_05650 NZ_NPMB01000002.1 Protein Homology CDS 422772 424199 . - 0 ID=cds-WP_080177186.1;Parent=gene-CCO56_RS05650;Dbxref=GenBank:WP_080177186.1;Name=WP_080177186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001027883.1;locus_tag=CCO56_RS05650;product=phosphomannomutase;protein_id=WP_080177186.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 424204 425619 . - . ID=gene-CCO56_RS05655;Name=CCO56_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05655;old_locus_tag=CCO56_05655 NZ_NPMB01000002.1 Protein Homology CDS 424204 425619 . - 0 ID=cds-WP_080177181.1;Parent=gene-CCO56_RS05655;Dbxref=GenBank:WP_080177181.1;Name=WP_080177181.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586530.1;locus_tag=CCO56_RS05655;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_080177181.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 425621 426823 . - . ID=gene-CCO56_RS05660;Name=CCO56_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05660;old_locus_tag=CCO56_05660 NZ_NPMB01000002.1 Protein Homology CDS 425621 426823 . - 0 ID=cds-WP_080177180.1;Parent=gene-CCO56_RS05660;Dbxref=GenBank:WP_080177180.1;Name=WP_080177180.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065080.1;locus_tag=CCO56_RS05660;product=glycosyltransferase family 4 protein;protein_id=WP_080177180.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 426816 427820 . - . ID=gene-CCO56_RS05665;Name=CCO56_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05665;old_locus_tag=CCO56_05665 NZ_NPMB01000002.1 Protein Homology CDS 426816 427820 . - 0 ID=cds-WP_080177179.1;Parent=gene-CCO56_RS05665;Dbxref=GenBank:WP_080177179.1;Name=WP_080177179.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864846.1;locus_tag=CCO56_RS05665;product=glycosyltransferase;protein_id=WP_080177179.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 428221 429114 . - . ID=gene-CCO56_RS05670;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=CCO56_RS05670;old_locus_tag=CCO56_05670 NZ_NPMB01000002.1 Protein Homology CDS 428221 429114 . - 0 ID=cds-WP_000981469.1;Parent=gene-CCO56_RS05670;Dbxref=GenBank:WP_000981469.1;Name=WP_000981469.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=CCO56_RS05670;product=GalU regulator GalF;protein_id=WP_000981469.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 429292 430695 . - . ID=gene-CCO56_RS05675;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=CCO56_RS05675;old_locus_tag=CCO56_05675 NZ_NPMB01000002.1 Protein Homology CDS 429292 430695 . - 0 ID=cds-WP_076166218.1;Parent=gene-CCO56_RS05675;Dbxref=GenBank:WP_076166218.1;Name=WP_076166218.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=CCO56_RS05675;product=colanic acid biosynthesis protein WcaM;protein_id=WP_076166218.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 430706 431926 . - . ID=gene-CCO56_RS05680;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=CCO56_RS05680;old_locus_tag=CCO56_05680 NZ_NPMB01000002.1 Protein Homology CDS 430706 431926 . - 0 ID=cds-WP_000868524.1;Parent=gene-CCO56_RS05680;Dbxref=GenBank:WP_000868524.1;Name=WP_000868524.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=CCO56_RS05680;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_000868524.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 431923 433203 . - . ID=gene-CCO56_RS05685;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=CCO56_RS05685;old_locus_tag=CCO56_05685 NZ_NPMB01000002.1 Protein Homology CDS 431923 433203 . - 0 ID=cds-WP_000770901.1;Parent=gene-CCO56_RS05685;Dbxref=GenBank:WP_000770901.1;Name=WP_000770901.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=CCO56_RS05685;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_000770901.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 433225 434703 . - . ID=gene-CCO56_RS05690;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=CCO56_RS05690;old_locus_tag=CCO56_05690 NZ_NPMB01000002.1 Protein Homology CDS 433225 434703 . - 0 ID=cds-WP_000058685.1;Parent=gene-CCO56_RS05690;Dbxref=GenBank:WP_000058685.1;Name=WP_000058685.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=CCO56_RS05690;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_000058685.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 434836 436230 . - . ID=gene-CCO56_RS05695;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=CCO56_RS05695;old_locus_tag=CCO56_05695 NZ_NPMB01000002.1 Protein Homology CDS 434836 436230 . - 0 ID=cds-WP_000183165.1;Parent=gene-CCO56_RS05695;Dbxref=GenBank:WP_000183165.1;Name=WP_000183165.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=CCO56_RS05695;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183165.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 436284 437654 . - . ID=gene-CCO56_RS05700;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=CCO56_RS05700;old_locus_tag=CCO56_05700 NZ_NPMB01000002.1 Protein Homology CDS 436284 437654 . - 0 ID=cds-WP_080177178.1;Parent=gene-CCO56_RS05700;Dbxref=GenBank:WP_080177178.1;Name=WP_080177178.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=CCO56_RS05700;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_080177178.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 437765 439207 . - . ID=gene-CCO56_RS05705;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=CCO56_RS05705;old_locus_tag=CCO56_05705 NZ_NPMB01000002.1 Protein Homology CDS 437765 439207 . - 0 ID=cds-WP_000605943.1;Parent=gene-CCO56_RS05705;Dbxref=GenBank:WP_000605943.1;Name=WP_000605943.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=CCO56_RS05705;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605943.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 439204 440427 . - . ID=gene-CCO56_RS05710;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=CCO56_RS05710;old_locus_tag=CCO56_05710 NZ_NPMB01000002.1 Protein Homology CDS 439204 440427 . - 0 ID=cds-WP_094882037.1;Parent=gene-CCO56_RS05710;Dbxref=GenBank:WP_094882037.1;Name=WP_094882037.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=CCO56_RS05710;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_094882037.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 440424 440897 . - . ID=gene-CCO56_RS05715;Name=CCO56_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05715;old_locus_tag=CCO56_05715 NZ_NPMB01000002.1 Protein Homology CDS 440424 440897 . - 0 ID=cds-WP_023212545.1;Parent=gene-CCO56_RS05715;Dbxref=GenBank:WP_023212545.1;Name=WP_023212545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=CCO56_RS05715;product=GDP-mannose mannosyl hydrolase;protein_id=WP_023212545.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 440900 441865 . - . ID=gene-CCO56_RS05720;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=CCO56_RS05720;old_locus_tag=CCO56_05720 NZ_NPMB01000002.1 Protein Homology CDS 440900 441865 . - 0 ID=cds-WP_080177177.1;Parent=gene-CCO56_RS05720;Dbxref=GenBank:WP_080177177.1;Name=WP_080177177.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=CCO56_RS05720;product=GDP-L-fucose synthase;protein_id=WP_080177177.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 441868 442989 . - . ID=gene-CCO56_RS05725;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CCO56_RS05725;old_locus_tag=CCO56_05725 NZ_NPMB01000002.1 Protein Homology CDS 441868 442989 . - 0 ID=cds-WP_000048160.1;Parent=gene-CCO56_RS05725;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=CCO56_RS05725;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 443013 443567 . - . ID=gene-CCO56_RS05730;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=CCO56_RS05730;old_locus_tag=CCO56_05730 NZ_NPMB01000002.1 Protein Homology CDS 443013 443567 . - 0 ID=cds-WP_001153603.1;Parent=gene-CCO56_RS05730;Dbxref=GenBank:WP_001153603.1;Name=WP_001153603.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=CCO56_RS05730;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153603.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 443583 444329 . - . ID=gene-CCO56_RS05735;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=CCO56_RS05735;old_locus_tag=CCO56_05735 NZ_NPMB01000002.1 Protein Homology CDS 443583 444329 . - 0 ID=cds-WP_000480132.1;Parent=gene-CCO56_RS05735;Dbxref=GenBank:WP_000480132.1;Name=WP_000480132.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=CCO56_RS05735;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000480132.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 444342 445556 . - . ID=gene-CCO56_RS05740;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=CCO56_RS05740;old_locus_tag=CCO56_05740 NZ_NPMB01000002.1 Protein Homology CDS 444342 445556 . - 0 ID=cds-WP_000091402.1;Parent=gene-CCO56_RS05740;Dbxref=GenBank:WP_000091402.1;Name=WP_000091402.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=CCO56_RS05740;product=colanic acid polymerase WcaD;protein_id=WP_000091402.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 445531 446748 . - . ID=gene-CCO56_RS05745;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=CCO56_RS05745;old_locus_tag=CCO56_05745 NZ_NPMB01000002.1 Protein Homology CDS 445531 446748 . - 0 ID=cds-WP_001023832.1;Parent=gene-CCO56_RS05745;Dbxref=GenBank:WP_001023832.1;Name=WP_001023832.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=CCO56_RS05745;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023832.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 446745 447233 . - . ID=gene-CCO56_RS05750;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=CCO56_RS05750;old_locus_tag=CCO56_05750 NZ_NPMB01000002.1 Protein Homology CDS 446745 447233 . - 0 ID=cds-WP_079781374.1;Parent=gene-CCO56_RS05750;Dbxref=GenBank:WP_079781374.1;Name=WP_079781374.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=CCO56_RS05750;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_079781374.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 447236 448078 . - . ID=gene-CCO56_RS05755;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=CCO56_RS05755;old_locus_tag=CCO56_05755 NZ_NPMB01000002.1 Protein Homology CDS 447236 448078 . - 0 ID=cds-WP_000205692.1;Parent=gene-CCO56_RS05755;Dbxref=GenBank:WP_000205692.1;Name=WP_000205692.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=CCO56_RS05755;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205692.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 448165 450324 . - . ID=gene-CCO56_RS05760;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=CCO56_RS05760;old_locus_tag=CCO56_05760 NZ_NPMB01000002.1 Protein Homology CDS 448165 450324 . - 0 ID=cds-WP_080177176.1;Parent=gene-CCO56_RS05760;Dbxref=GenBank:WP_080177176.1;Name=WP_080177176.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=CCO56_RS05760;product=tyrosine-protein kinase Wzc;protein_id=WP_080177176.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 450321 450770 . - . ID=gene-CCO56_RS05765;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=CCO56_RS05765;old_locus_tag=CCO56_05765 NZ_NPMB01000002.1 Protein Homology CDS 450321 450770 . - 0 ID=cds-WP_000482224.1;Parent=gene-CCO56_RS05765;Dbxref=GenBank:WP_000482224.1;Name=WP_000482224.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=CCO56_RS05765;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482224.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 450776 451915 . - . ID=gene-CCO56_RS05770;Name=CCO56_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05770;old_locus_tag=CCO56_05770 NZ_NPMB01000002.1 Protein Homology CDS 450776 451915 . - 0 ID=cds-WP_000978077.1;Parent=gene-CCO56_RS05770;Dbxref=GenBank:WP_000978077.1;Name=WP_000978077.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=CCO56_RS05770;product=polysaccharide export protein;protein_id=WP_000978077.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 452590 454170 . + . ID=gene-CCO56_RS05780;Name=CCO56_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05780;old_locus_tag=CCO56_05780 NZ_NPMB01000002.1 Protein Homology CDS 452590 454170 . + 0 ID=cds-WP_000454712.1;Parent=gene-CCO56_RS05780;Dbxref=GenBank:WP_000454712.1;Name=WP_000454712.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=CCO56_RS05780;product=TerC family protein;protein_id=WP_000454712.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 454256 456112 . - . ID=gene-CCO56_RS05785;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=CCO56_RS05785;old_locus_tag=CCO56_05785 NZ_NPMB01000002.1 Protein Homology CDS 454256 456112 . - 0 ID=cds-WP_001252264.1;Parent=gene-CCO56_RS05785;Dbxref=GenBank:WP_001252264.1;Name=WP_001252264.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=CCO56_RS05785;product=outer membrane assembly protein AsmA;protein_id=WP_001252264.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 456151 456732 . - . ID=gene-CCO56_RS05790;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CCO56_RS05790;old_locus_tag=CCO56_05790 NZ_NPMB01000002.1 Protein Homology CDS 456151 456732 . - 0 ID=cds-WP_001234783.1;Parent=gene-CCO56_RS05790;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=CCO56_RS05790;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 456823 457464 . - . ID=gene-CCO56_RS05795;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CCO56_RS05795;old_locus_tag=CCO56_05795 NZ_NPMB01000002.1 Protein Homology CDS 456823 457464 . - 0 ID=cds-WP_000132082.1;Parent=gene-CCO56_RS05795;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=CCO56_RS05795;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 457795 460785 . + . ID=gene-CCO56_RS05800;Name=CCO56_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05800;old_locus_tag=CCO56_05800 NZ_NPMB01000002.1 Protein Homology CDS 457795 460785 . + 0 ID=cds-WP_079915249.1;Parent=gene-CCO56_RS05800;Dbxref=GenBank:WP_079915249.1;Name=WP_079915249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=CCO56_RS05800;product=MASE1 domain-containing protein;protein_id=WP_079915249.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 460753 461622 . - . ID=gene-CCO56_RS05805;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=CCO56_RS05805;old_locus_tag=CCO56_05805 NZ_NPMB01000002.1 Protein Homology CDS 460753 461622 . - 0 ID=cds-WP_023217263.1;Parent=gene-CCO56_RS05805;Dbxref=GenBank:WP_023217263.1;Name=WP_023217263.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=CCO56_RS05805;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_023217263.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 461756 463108 . + . ID=gene-CCO56_RS05815;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=CCO56_RS05815;old_locus_tag=CCO56_05815 NZ_NPMB01000002.1 Protein Homology CDS 461756 463108 . + 0 ID=cds-WP_000469626.1;Parent=gene-CCO56_RS05815;Dbxref=GenBank:WP_000469626.1;Name=WP_000469626.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=CCO56_RS05815;product=molecular chaperone;protein_id=WP_000469626.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 463207 463266 . - . ID=gene-CCO56_RS23325;Name=CCO56_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23325 NZ_NPMB01000002.1 Protein Homology CDS 463207 463266 . - 0 ID=cds-WP_105887528.1;Parent=gene-CCO56_RS23325;Dbxref=GenBank:WP_105887528.1;Name=WP_105887528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=CCO56_RS23325;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_105887528.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 463549 464790 . + . ID=gene-CCO56_RS05820;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=CCO56_RS05820;old_locus_tag=CCO56_05820 NZ_NPMB01000002.1 Protein Homology CDS 463549 464790 . + 0 ID=cds-WP_000678803.1;Parent=gene-CCO56_RS05820;Dbxref=GenBank:WP_000678803.1;Name=WP_000678803.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=CCO56_RS05820;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678803.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 464790 467912 . + . ID=gene-CCO56_RS05825;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=CCO56_RS05825;old_locus_tag=CCO56_05825 NZ_NPMB01000002.1 Protein Homology CDS 464790 467912 . + 0 ID=cds-WP_023137012.1;Parent=gene-CCO56_RS05825;Dbxref=GenBank:WP_023137012.1;Name=WP_023137012.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=CCO56_RS05825;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_023137012.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 467913 470993 . + . ID=gene-CCO56_RS05830;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=CCO56_RS05830;old_locus_tag=CCO56_05830 NZ_NPMB01000002.1 Protein Homology CDS 467913 470993 . + 0 ID=cds-WP_080177175.1;Parent=gene-CCO56_RS05830;Dbxref=GenBank:WP_080177175.1;Name=WP_080177175.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=CCO56_RS05830;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_080177175.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 470990 472402 . + . ID=gene-CCO56_RS05835;Name=CCO56_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05835;old_locus_tag=CCO56_05835 NZ_NPMB01000002.1 Protein Homology CDS 470990 472402 . + 0 ID=cds-WP_058344246.1;Parent=gene-CCO56_RS05835;Dbxref=GenBank:WP_058344246.1;Name=WP_058344246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=CCO56_RS05835;product=MFS transporter;protein_id=WP_058344246.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 472402 473805 . + . ID=gene-CCO56_RS05840;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=CCO56_RS05840;old_locus_tag=CCO56_05840 NZ_NPMB01000002.1 Protein Homology CDS 472402 473805 . + 0 ID=cds-WP_000870081.1;Parent=gene-CCO56_RS05840;Dbxref=GenBank:WP_000870081.1;Name=WP_000870081.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=CCO56_RS05840;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000870081.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 473802 474524 . + . ID=gene-CCO56_RS05845;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=CCO56_RS05845;old_locus_tag=CCO56_05845 NZ_NPMB01000002.1 Protein Homology CDS 473802 474524 . + 0 ID=cds-WP_000137854.1;Parent=gene-CCO56_RS05845;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=CCO56_RS05845;product=two-component system response regulator BaeR;protein_id=WP_000137854.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 474793 475995 . + . ID=gene-CCO56_RS05855;Name=CCO56_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05855;old_locus_tag=CCO56_05855 NZ_NPMB01000002.1 Protein Homology CDS 474793 475995 . + 0 ID=cds-WP_000141060.1;Parent=gene-CCO56_RS05855;Dbxref=GenBank:WP_000141060.1;Name=WP_000141060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=CCO56_RS05855;product=hypothetical protein;protein_id=WP_000141060.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 475995 476711 . + . ID=gene-CCO56_RS05860;Name=CCO56_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05860;old_locus_tag=CCO56_05860 NZ_NPMB01000002.1 Protein Homology CDS 475995 476711 . + 0 ID=cds-WP_080177174.1;Parent=gene-CCO56_RS05860;Dbxref=GenBank:WP_080177174.1;Name=WP_080177174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=CCO56_RS05860;product=DUF1266 domain-containing protein;protein_id=WP_080177174.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 476722 478833 . + . ID=gene-CCO56_RS05865;Name=CCO56_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05865;old_locus_tag=CCO56_05865 NZ_NPMB01000002.1 Protein Homology CDS 476722 478833 . + 0 ID=cds-WP_080177173.1;Parent=gene-CCO56_RS05865;Dbxref=GenBank:WP_080177173.1;Name=WP_080177173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=CCO56_RS05865;product=DUF4034 domain-containing protein;protein_id=WP_080177173.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 478949 480310 . + . ID=gene-CCO56_RS05870;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=CCO56_RS05870;old_locus_tag=CCO56_05870 NZ_NPMB01000002.1 Protein Homology CDS 478949 480310 . + 0 ID=cds-WP_001517981.1;Parent=gene-CCO56_RS05870;Dbxref=GenBank:WP_001517981.1;Name=WP_001517981.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=CCO56_RS05870;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_001517981.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 480761 480940 . + . ID=gene-CCO56_RS05875;Name=CCO56_RS05875;end_range=480940,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS05875;old_locus_tag=CCO56_05875;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 480761 480940 . + 0 ID=cds-CCO56_RS05875;Parent=gene-CCO56_RS05875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=480940,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=CCO56_RS05875;partial=true;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 480950 481366 . - . ID=gene-CCO56_RS05880;Name=CCO56_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05880;old_locus_tag=CCO56_05880 NZ_NPMB01000002.1 Protein Homology CDS 480950 481366 . - 0 ID=cds-WP_001555792.1;Parent=gene-CCO56_RS05880;Dbxref=GenBank:WP_001555792.1;Name=WP_001555792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=CCO56_RS05880;product=CesT family type III secretion system chaperone;protein_id=WP_001555792.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 481488 481823 . - . ID=gene-CCO56_RS05885;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=CCO56_RS05885;old_locus_tag=CCO56_05885 NZ_NPMB01000002.1 Protein Homology CDS 481488 481823 . - 0 ID=cds-WP_031602137.1;Parent=gene-CCO56_RS05885;Dbxref=GenBank:WP_031602137.1;Name=WP_031602137.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=CCO56_RS05885;product=type III secretion system effector SteD;protein_id=WP_031602137.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 482382 483281 . + . ID=gene-CCO56_RS05890;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=CCO56_RS05890;old_locus_tag=CCO56_05890 NZ_NPMB01000002.1 Protein Homology CDS 482382 483281 . + 0 ID=cds-WP_001273393.1;Parent=gene-CCO56_RS05890;Dbxref=GenBank:WP_001273393.1;Name=WP_001273393.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=CCO56_RS05890;product=lipid kinase YegS;protein_id=WP_001273393.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 483334 484386 . - . ID=gene-CCO56_RS05895;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=CCO56_RS05895;old_locus_tag=CCO56_05895 NZ_NPMB01000002.1 Protein Homology CDS 483334 484386 . - 0 ID=cds-WP_000129590.1;Parent=gene-CCO56_RS05895;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=CCO56_RS05895;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 484640 485911 . + . ID=gene-CCO56_RS05900;Name=CCO56_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05900;old_locus_tag=CCO56_05900 NZ_NPMB01000002.1 Protein Homology CDS 484640 485911 . + 0 ID=cds-WP_080177247.1;Parent=gene-CCO56_RS05900;Dbxref=GenBank:WP_080177247.1;Name=WP_080177247.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=CCO56_RS05900;product=nucleoside permease;protein_id=WP_080177247.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 485908 486912 . + . ID=gene-CCO56_RS05905;Name=CCO56_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05905;old_locus_tag=CCO56_05905 NZ_NPMB01000002.1 Protein Homology CDS 485908 486912 . + 0 ID=cds-WP_000642793.1;Parent=gene-CCO56_RS05905;Dbxref=GenBank:WP_000642793.1;Name=WP_000642793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=CCO56_RS05905;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642793.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 486909 487874 . + . ID=gene-CCO56_RS05910;Name=CCO56_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05910;old_locus_tag=CCO56_05910 NZ_NPMB01000002.1 Protein Homology CDS 486909 487874 . + 0 ID=cds-WP_080177246.1;Parent=gene-CCO56_RS05910;Dbxref=GenBank:WP_080177246.1;Name=WP_080177246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=CCO56_RS05910;product=PfkB family carbohydrate kinase;protein_id=WP_080177246.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 487848 488594 . - . ID=gene-CCO56_RS05915;Name=CCO56_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05915;old_locus_tag=CCO56_05915 NZ_NPMB01000002.1 Protein Homology CDS 487848 488594 . - 0 ID=cds-WP_000434059.1;Parent=gene-CCO56_RS05915;Dbxref=GenBank:WP_000434059.1;Name=WP_000434059.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=CCO56_RS05915;product=GntR family transcriptional regulator;protein_id=WP_000434059.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 488631 489431 . - . ID=gene-CCO56_RS05920;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CCO56_RS05920;old_locus_tag=CCO56_05920 NZ_NPMB01000002.1 Protein Homology CDS 488631 489431 . - 0 ID=cds-WP_080177245.1;Parent=gene-CCO56_RS05920;Dbxref=GenBank:WP_080177245.1;Name=WP_080177245.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=CCO56_RS05920;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_080177245.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 489418 490215 . - . ID=gene-CCO56_RS05925;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CCO56_RS05925;old_locus_tag=CCO56_05925 NZ_NPMB01000002.1 Protein Homology CDS 489418 490215 . - 0 ID=cds-WP_080177244.1;Parent=gene-CCO56_RS05925;Dbxref=GenBank:WP_080177244.1;Name=WP_080177244.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=CCO56_RS05925;product=hydroxyethylthiazole kinase;protein_id=WP_080177244.1;transl_table=11 NZ_NPMB01000002.1 cmsearch riboswitch 490247 490343 . - . ID=id-NZ_NPMB01000002.1:490247..490343;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMB01000002.1 RefSeq gene 490625 490939 . + . ID=gene-CCO56_RS05930;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=CCO56_RS05930;old_locus_tag=CCO56_05930 NZ_NPMB01000002.1 Protein Homology CDS 490625 490939 . + 0 ID=cds-WP_000837534.1;Parent=gene-CCO56_RS05930;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=CCO56_RS05930;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 490981 491988 . - . ID=gene-CCO56_RS05935;Name=CCO56_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05935;old_locus_tag=CCO56_05935 NZ_NPMB01000002.1 Protein Homology CDS 490981 491988 . - 0 ID=cds-WP_080177243.1;Parent=gene-CCO56_RS05935;Dbxref=GenBank:WP_080177243.1;Name=WP_080177243.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269814.1;locus_tag=CCO56_RS05935;product=fimbrial protein;protein_id=WP_080177243.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 491997 494477 . - . ID=gene-CCO56_RS05940;Name=CCO56_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05940;old_locus_tag=CCO56_05940 NZ_NPMB01000002.1 Protein Homology CDS 491997 494477 . - 0 ID=cds-WP_000945356.1;Parent=gene-CCO56_RS05940;Dbxref=GenBank:WP_000945356.1;Name=WP_000945356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310942.1;locus_tag=CCO56_RS05940;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945356.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 494490 495173 . - . ID=gene-CCO56_RS05945;Name=CCO56_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05945;old_locus_tag=CCO56_05945 NZ_NPMB01000002.1 Protein Homology CDS 494490 495173 . - 0 ID=cds-WP_000675776.1;Parent=gene-CCO56_RS05945;Dbxref=GenBank:WP_000675776.1;Name=WP_000675776.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675777.1;locus_tag=CCO56_RS05945;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000675776.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 495225 495767 . - . ID=gene-CCO56_RS05950;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=CCO56_RS05950;old_locus_tag=CCO56_05950 NZ_NPMB01000002.1 Protein Homology CDS 495225 495767 . - 0 ID=cds-WP_080177242.1;Parent=gene-CCO56_RS05950;Dbxref=GenBank:WP_080177242.1;Name=WP_080177242.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683844.1;locus_tag=CCO56_RS05950;product=fimbrial protein YehD;protein_id=WP_080177242.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 496046 496327 . - . ID=gene-CCO56_RS05955;Name=CCO56_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05955;old_locus_tag=CCO56_05955 NZ_NPMB01000002.1 Protein Homology CDS 496046 496327 . - 0 ID=cds-WP_001543027.1;Parent=gene-CCO56_RS05955;Dbxref=GenBank:WP_001543027.1;Name=WP_001543027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760407.1;locus_tag=CCO56_RS05955;product=DUF2574 family protein;protein_id=WP_001543027.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 496594 497703 . - . ID=gene-CCO56_RS05960;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=CCO56_RS05960;old_locus_tag=CCO56_05960 NZ_NPMB01000002.1 Protein Homology CDS 496594 497703 . - 0 ID=cds-WP_001005424.1;Parent=gene-CCO56_RS05960;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=CCO56_RS05960;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 497868 499901 . + . ID=gene-CCO56_RS05965;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CCO56_RS05965;old_locus_tag=CCO56_05965 NZ_NPMB01000002.1 Protein Homology CDS 497868 499901 . + 0 ID=cds-WP_080177241.1;Parent=gene-CCO56_RS05965;Dbxref=GenBank:WP_080177241.1;Name=WP_080177241.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=CCO56_RS05965;product=methionine--tRNA ligase;protein_id=WP_080177241.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 500143 500601 . + . ID=gene-CCO56_RS05970;Name=CCO56_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05970;old_locus_tag=CCO56_05970 NZ_NPMB01000002.1 Protein Homology CDS 500143 500601 . + 0 ID=cds-WP_000703136.1;Parent=gene-CCO56_RS05970;Dbxref=GenBank:WP_000703136.1;Name=WP_000703136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=CCO56_RS05970;product=YehR family lipoprotein;protein_id=WP_000703136.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 500773 501303 . + . ID=gene-CCO56_RS05975;Name=CCO56_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05975;old_locus_tag=CCO56_05975 NZ_NPMB01000002.1 Protein Homology CDS 500773 501303 . + 0 ID=cds-WP_069721497.1;Parent=gene-CCO56_RS05975;Dbxref=GenBank:WP_069721497.1;Name=WP_069721497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=CCO56_RS05975;product=YehR family lipoprotein;protein_id=WP_069721497.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 501360 501827 . - . ID=gene-CCO56_RS05980;Name=CCO56_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05980;old_locus_tag=CCO56_05980 NZ_NPMB01000002.1 Protein Homology CDS 501360 501827 . - 0 ID=cds-WP_076166251.1;Parent=gene-CCO56_RS05980;Dbxref=GenBank:WP_076166251.1;Name=WP_076166251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=CCO56_RS05980;product=DUF1456 family protein;protein_id=WP_076166251.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 501874 502593 . - . ID=gene-CCO56_RS05985;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=CCO56_RS05985;old_locus_tag=CCO56_05985 NZ_NPMB01000002.1 Protein Homology CDS 501874 502593 . - 0 ID=cds-WP_000598637.1;Parent=gene-CCO56_RS05985;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=CCO56_RS05985;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 502590 504275 . - . ID=gene-CCO56_RS05990;Name=CCO56_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS05990;old_locus_tag=CCO56_05990 NZ_NPMB01000002.1 Protein Homology CDS 502590 504275 . - 0 ID=cds-WP_000272850.1;Parent=gene-CCO56_RS05990;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=CCO56_RS05990;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 504498 505229 . + . ID=gene-CCO56_RS05995;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=CCO56_RS05995;old_locus_tag=CCO56_05995 NZ_NPMB01000002.1 Protein Homology CDS 504498 505229 . + 0 ID=cds-WP_076166254.1;Parent=gene-CCO56_RS05995;Dbxref=GenBank:WP_076166254.1;Name=WP_076166254.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=CCO56_RS05995;product=HTH-type transcriptional regulator MlrA;protein_id=WP_076166254.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 505289 505396 . + . ID=gene-CCO56_RS06000;Name=CCO56_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06000;old_locus_tag=CCO56_06000 NZ_NPMB01000002.1 Protein Homology CDS 505289 505396 . + 0 ID=cds-WP_001261696.1;Parent=gene-CCO56_RS06000;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=CCO56_RS06000;product=protein YohO;protein_id=WP_001261696.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 505377 506108 . - . ID=gene-CCO56_RS06005;Name=CCO56_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06005;old_locus_tag=CCO56_06005 NZ_NPMB01000002.1 Protein Homology CDS 505377 506108 . - 0 ID=cds-WP_080177240.1;Parent=gene-CCO56_RS06005;Dbxref=GenBank:WP_080177240.1;Name=WP_080177240.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=CCO56_RS06005;product=ABC transporter permease;protein_id=WP_080177240.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 506092 507039 . - . ID=gene-CCO56_RS06010;Name=CCO56_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06010;old_locus_tag=CCO56_06010 NZ_NPMB01000002.1 Protein Homology CDS 506092 507039 . - 0 ID=cds-WP_052942727.1;Parent=gene-CCO56_RS06010;Dbxref=GenBank:WP_052942727.1;Name=WP_052942727.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=CCO56_RS06010;product=ABC transporter ATP-binding protein;protein_id=WP_052942727.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 507032 508201 . - . ID=gene-CCO56_RS06015;Name=CCO56_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06015;old_locus_tag=CCO56_06015 NZ_NPMB01000002.1 Protein Homology CDS 507032 508201 . - 0 ID=cds-WP_080177239.1;Parent=gene-CCO56_RS06015;Dbxref=GenBank:WP_080177239.1;Name=WP_080177239.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=CCO56_RS06015;product=ABC transporter permease;protein_id=WP_080177239.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 508205 509122 . - . ID=gene-CCO56_RS06020;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=CCO56_RS06020;old_locus_tag=CCO56_06020 NZ_NPMB01000002.1 Protein Homology CDS 508205 509122 . - 0 ID=cds-WP_000155876.1;Parent=gene-CCO56_RS06020;Dbxref=GenBank:WP_000155876.1;Name=WP_000155876.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=CCO56_RS06020;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155876.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 509302 511599 . - . ID=gene-CCO56_RS06025;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=CCO56_RS06025;old_locus_tag=CCO56_06025 NZ_NPMB01000002.1 Protein Homology CDS 509302 511599 . - 0 ID=cds-WP_080177238.1;Parent=gene-CCO56_RS06025;Dbxref=GenBank:WP_080177238.1;Name=WP_080177238.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=CCO56_RS06025;product=beta-glucosidase BglX;protein_id=WP_080177238.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 511866 513596 . + . ID=gene-CCO56_RS06030;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=CCO56_RS06030;old_locus_tag=CCO56_06030 NZ_NPMB01000002.1 Protein Homology CDS 511866 513596 . + 0 ID=cds-WP_000095235.1;Parent=gene-CCO56_RS06030;Dbxref=GenBank:WP_000095235.1;Name=WP_000095235.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=CCO56_RS06030;product=D-lactate dehydrogenase;protein_id=WP_000095235.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 513655 514602 . - . ID=gene-CCO56_RS06035;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=CCO56_RS06035;old_locus_tag=CCO56_06035 NZ_NPMB01000002.1 Protein Homology CDS 513655 514602 . - 0 ID=cds-WP_000911551.1;Parent=gene-CCO56_RS06035;Dbxref=GenBank:WP_000911551.1;Name=WP_000911551.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=CCO56_RS06035;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911551.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 514768 515355 . - . ID=gene-CCO56_RS06045;Name=CCO56_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06045;old_locus_tag=CCO56_06045 NZ_NPMB01000002.1 Protein Homology CDS 514768 515355 . - 0 ID=cds-WP_001017057.1;Parent=gene-CCO56_RS06045;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=CCO56_RS06045;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 515514 516083 . + . ID=gene-CCO56_RS06050;Name=CCO56_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06050;old_locus_tag=CCO56_06050 NZ_NPMB01000002.1 Protein Homology CDS 515514 516083 . + 0 ID=cds-WP_001530335.1;Parent=gene-CCO56_RS06050;Dbxref=GenBank:WP_001530335.1;Name=WP_001530335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=CCO56_RS06050;product=DedA family protein;protein_id=WP_001530335.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 516131 516892 . - . ID=gene-CCO56_RS06055;Name=CCO56_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06055;old_locus_tag=CCO56_06055 NZ_NPMB01000002.1 Protein Homology CDS 516131 516892 . - 0 ID=cds-WP_000169617.1;Parent=gene-CCO56_RS06055;Dbxref=GenBank:WP_000169617.1;Name=WP_000169617.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=CCO56_RS06055;product=SDR family oxidoreductase;protein_id=WP_000169617.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 516958 518394 . - . ID=gene-CCO56_RS06060;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=CCO56_RS06060;old_locus_tag=CCO56_06060 NZ_NPMB01000002.1 Protein Homology CDS 516958 518394 . - 0 ID=cds-WP_001081457.1;Parent=gene-CCO56_RS06060;Dbxref=GenBank:WP_001081457.1;Name=WP_001081457.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=CCO56_RS06060;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081457.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 518712 518795 . + . ID=gene-CCO56_RS06065;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=CCO56_RS06065;old_locus_tag=CCO56_06065 NZ_NPMB01000002.1 Protein Homology CDS 518712 518795 . + 0 ID=cds-WP_000698460.1;Parent=gene-CCO56_RS06065;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=CCO56_RS06065;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 518853 519791 . - . ID=gene-CCO56_RS06070;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=CCO56_RS06070;old_locus_tag=CCO56_06070 NZ_NPMB01000002.1 Protein Homology CDS 518853 519791 . - 0 ID=cds-WP_001264834.1;Parent=gene-CCO56_RS06070;Dbxref=GenBank:WP_001264834.1;Name=WP_001264834.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=CCO56_RS06070;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264834.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 519900 521093 . - . ID=gene-CCO56_RS06075;Name=CCO56_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06075;old_locus_tag=CCO56_06075 NZ_NPMB01000002.1 Protein Homology CDS 519900 521093 . - 0 ID=cds-WP_000150099.1;Parent=gene-CCO56_RS06075;Dbxref=GenBank:WP_000150099.1;Name=WP_000150099.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=CCO56_RS06075;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150099.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 521108 521752 . - . ID=gene-CCO56_RS06080;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=CCO56_RS06080;old_locus_tag=CCO56_06080 NZ_NPMB01000002.1 Protein Homology CDS 521108 521752 . - 0 ID=cds-WP_000781183.1;Parent=gene-CCO56_RS06080;Dbxref=GenBank:WP_000781183.1;Name=WP_000781183.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=CCO56_RS06080;product=maleylacetoacetate isomerase;protein_id=WP_000781183.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 521761 522462 . - . ID=gene-CCO56_RS06085;Name=CCO56_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06085;old_locus_tag=CCO56_06085 NZ_NPMB01000002.1 Protein Homology CDS 521761 522462 . - 0 ID=cds-WP_000170627.1;Parent=gene-CCO56_RS06085;Dbxref=GenBank:WP_000170627.1;Name=WP_000170627.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=CCO56_RS06085;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170627.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 522478 523515 . - . ID=gene-CCO56_RS06090;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=CCO56_RS06090;old_locus_tag=CCO56_06090 NZ_NPMB01000002.1 Protein Homology CDS 522478 523515 . - 0 ID=cds-WP_001289857.1;Parent=gene-CCO56_RS06090;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=CCO56_RS06090;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 523527 524885 . - . ID=gene-CCO56_RS06095;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=CCO56_RS06095;old_locus_tag=CCO56_06095 NZ_NPMB01000002.1 Protein Homology CDS 523527 524885 . - 0 ID=cds-WP_079823429.1;Parent=gene-CCO56_RS06095;Dbxref=GenBank:WP_079823429.1;Name=WP_079823429.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=CCO56_RS06095;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_079823429.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 525011 525919 . + . ID=gene-CCO56_RS06100;Name=CCO56_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06100;old_locus_tag=CCO56_06100 NZ_NPMB01000002.1 Protein Homology CDS 525011 525919 . + 0 ID=cds-WP_000024662.1;Parent=gene-CCO56_RS06100;Dbxref=GenBank:WP_000024662.1;Name=WP_000024662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=CCO56_RS06100;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024662.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 526051 526449 . + . ID=gene-CCO56_RS06105;Name=CCO56_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06105;old_locus_tag=CCO56_06105 NZ_NPMB01000002.1 Protein Homology CDS 526051 526449 . + 0 ID=cds-WP_000045719.1;Parent=gene-CCO56_RS06105;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=CCO56_RS06105;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 526446 527141 . + . ID=gene-CCO56_RS06110;Name=CCO56_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06110;old_locus_tag=CCO56_06110 NZ_NPMB01000002.1 Protein Homology CDS 526446 527141 . + 0 ID=cds-WP_000989296.1;Parent=gene-CCO56_RS06110;Dbxref=GenBank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=CCO56_RS06110;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 527295 528179 . + . ID=gene-CCO56_RS06115;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CCO56_RS06115;old_locus_tag=CCO56_06115 NZ_NPMB01000002.1 Protein Homology CDS 527295 528179 . + 0 ID=cds-WP_000553526.1;Parent=gene-CCO56_RS06115;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=CCO56_RS06115;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 528356 529075 . + . ID=gene-CCO56_RS06120;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=CCO56_RS06120;old_locus_tag=CCO56_06120 NZ_NPMB01000002.1 Protein Homology CDS 528356 529075 . + 0 ID=cds-WP_000920081.1;Parent=gene-CCO56_RS06120;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=CCO56_RS06120;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 529072 529317 . + . ID=gene-CCO56_RS06125;Name=CCO56_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06125;old_locus_tag=CCO56_06125 NZ_NPMB01000002.1 Protein Homology CDS 529072 529317 . + 0 ID=cds-WP_000605187.1;Parent=gene-CCO56_RS06125;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=CCO56_RS06125;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 529522 530763 . + . ID=gene-CCO56_RS06130;Name=CCO56_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06130;old_locus_tag=CCO56_06130 NZ_NPMB01000002.1 Protein Homology CDS 529522 530763 . + 0 ID=cds-WP_001136411.1;Parent=gene-CCO56_RS06130;Dbxref=GenBank:WP_001136411.1;Name=WP_001136411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=CCO56_RS06130;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001136411.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 530757 531992 . + . ID=gene-CCO56_RS06135;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=CCO56_RS06135;old_locus_tag=CCO56_06135 NZ_NPMB01000002.1 Protein Homology CDS 530757 531992 . + 0 ID=cds-WP_000956095.1;Parent=gene-CCO56_RS06135;Dbxref=GenBank:WP_000956095.1;Name=WP_000956095.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=CCO56_RS06135;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956095.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 532067 533077 . - . ID=gene-CCO56_RS06140;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=CCO56_RS06140;old_locus_tag=CCO56_06140 NZ_NPMB01000002.1 Protein Homology CDS 532067 533077 . - 0 ID=cds-WP_001275101.1;Parent=gene-CCO56_RS06140;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=CCO56_RS06140;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 533093 534613 . - . ID=gene-CCO56_RS06145;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=CCO56_RS06145;old_locus_tag=CCO56_06145 NZ_NPMB01000002.1 Protein Homology CDS 533093 534613 . - 0 ID=cds-WP_023215249.1;Parent=gene-CCO56_RS06145;Dbxref=GenBank:WP_023215249.1;Name=WP_023215249.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=CCO56_RS06145;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_023215249.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 534747 535745 . - . ID=gene-CCO56_RS06150;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=CCO56_RS06150;old_locus_tag=CCO56_06150 NZ_NPMB01000002.1 Protein Homology CDS 534747 535745 . - 0 ID=cds-WP_001036937.1;Parent=gene-CCO56_RS06150;Dbxref=GenBank:WP_001036937.1;Name=WP_001036937.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=CCO56_RS06150;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036937.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 536244 537266 . - . ID=gene-CCO56_RS06155;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=CCO56_RS06155;old_locus_tag=CCO56_06155 NZ_NPMB01000002.1 Protein Homology CDS 536244 537266 . - 0 ID=cds-WP_000628634.1;Parent=gene-CCO56_RS06155;Dbxref=GenBank:WP_000628634.1;Name=WP_000628634.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=CCO56_RS06155;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628634.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 537416 538558 . - . ID=gene-CCO56_RS06160;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=CCO56_RS06160;old_locus_tag=CCO56_06160 NZ_NPMB01000002.1 Protein Homology CDS 537416 538558 . - 0 ID=cds-WP_080177326.1;Parent=gene-CCO56_RS06160;Dbxref=GenBank:WP_080177326.1;Name=WP_080177326.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=CCO56_RS06160;product=DUF418 domain-containing protein YeiB;protein_id=WP_080177326.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 538573 539241 . - . ID=gene-CCO56_RS06165;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CCO56_RS06165;old_locus_tag=CCO56_06165 NZ_NPMB01000002.1 Protein Homology CDS 538573 539241 . - 0 ID=cds-WP_001139611.1;Parent=gene-CCO56_RS06165;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=CCO56_RS06165;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 539571 540428 . + . ID=gene-CCO56_RS06175;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=CCO56_RS06175;old_locus_tag=CCO56_06175 NZ_NPMB01000002.1 Protein Homology CDS 539571 540428 . + 0 ID=cds-WP_000425497.1;Parent=gene-CCO56_RS06175;Dbxref=GenBank:WP_000425497.1;Name=WP_000425497.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=CCO56_RS06175;product=S-formylglutathione hydrolase;protein_id=WP_000425497.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 540417 540806 . - . ID=gene-CCO56_RS06180;Name=CCO56_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06180;old_locus_tag=CCO56_06180 NZ_NPMB01000002.1 Protein Homology CDS 540417 540806 . - 0 ID=cds-WP_000876817.1;Parent=gene-CCO56_RS06180;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=CCO56_RS06180;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 540811 542178 . - . ID=gene-CCO56_RS06185;Name=CCO56_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06185;old_locus_tag=CCO56_06185 NZ_NPMB01000002.1 Protein Homology CDS 540811 542178 . - 0 ID=cds-WP_001543035.1;Parent=gene-CCO56_RS06185;Dbxref=GenBank:WP_001543035.1;Name=WP_001543035.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=CCO56_RS06185;product=L-serine ammonia-lyase;protein_id=WP_001543035.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 542395 543282 . + . ID=gene-CCO56_RS06190;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO56_RS06190;old_locus_tag=CCO56_06190 NZ_NPMB01000002.1 Protein Homology CDS 542395 543282 . + 0 ID=cds-WP_000022904.1;Parent=gene-CCO56_RS06190;Dbxref=GenBank:WP_000022904.1;Name=WP_000022904.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=CCO56_RS06190;product=phosphoserine phosphatase SerB;protein_id=WP_000022904.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 543315 544637 . + . ID=gene-CCO56_RS06195;Name=CCO56_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06195;old_locus_tag=CCO56_06195 NZ_NPMB01000002.1 Protein Homology CDS 543315 544637 . + 0 ID=cds-WP_061377785.1;Parent=gene-CCO56_RS06195;Dbxref=GenBank:WP_061377785.1;Name=WP_061377785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=CCO56_RS06195;product=MFS transporter;protein_id=WP_061377785.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 544681 546672 . - . ID=gene-CCO56_RS06200;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=CCO56_RS06200;old_locus_tag=CCO56_06200 NZ_NPMB01000002.1 Protein Homology CDS 544681 546672 . - 0 ID=cds-WP_000488258.1;Parent=gene-CCO56_RS06200;Dbxref=GenBank:WP_000488258.1;Name=WP_000488258.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=CCO56_RS06200;product=catecholate siderophore receptor CirA;protein_id=WP_000488258.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 547017 548486 . - . ID=gene-CCO56_RS06210;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=CCO56_RS06210;old_locus_tag=CCO56_06210 NZ_NPMB01000002.1 Protein Homology CDS 547017 548486 . - 0 ID=cds-WP_000534999.1;Parent=gene-CCO56_RS06210;Dbxref=GenBank:WP_000534999.1;Name=WP_000534999.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=CCO56_RS06210;product=lysine-specific permease;protein_id=WP_000534999.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 548676 549539 . - . ID=gene-CCO56_RS06215;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=CCO56_RS06215;old_locus_tag=CCO56_06215 NZ_NPMB01000002.1 Protein Homology CDS 548676 549539 . - 0 ID=cds-WP_000548316.1;Parent=gene-CCO56_RS06215;Dbxref=GenBank:WP_000548316.1;Name=WP_000548316.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=CCO56_RS06215;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548316.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 549660 550709 . + . ID=gene-CCO56_RS06220;Name=CCO56_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06220;old_locus_tag=CCO56_06220 NZ_NPMB01000002.1 Protein Homology CDS 549660 550709 . + 0 ID=cds-WP_000137966.1;Parent=gene-CCO56_RS06220;Dbxref=GenBank:WP_000137966.1;Name=WP_000137966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=CCO56_RS06220;product=YeiH family protein;protein_id=WP_000137966.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 550788 551645 . + . ID=gene-CCO56_RS06225;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=CCO56_RS06225;old_locus_tag=CCO56_06225 NZ_NPMB01000002.1 Protein Homology CDS 550788 551645 . + 0 ID=cds-WP_000873906.1;Parent=gene-CCO56_RS06225;Dbxref=GenBank:WP_000873906.1;Name=WP_000873906.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=CCO56_RS06225;product=deoxyribonuclease IV;protein_id=WP_000873906.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 551710 553398 . - . ID=gene-CCO56_RS06230;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=CCO56_RS06230;old_locus_tag=CCO56_06230 NZ_NPMB01000002.1 Protein Homology CDS 551710 553398 . - 0 ID=cds-WP_024154939.1;Parent=gene-CCO56_RS06230;Dbxref=GenBank:WP_024154939.1;Name=WP_024154939.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=CCO56_RS06230;product=PTS fructose transporter subunit IIBC;protein_id=WP_024154939.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 553415 554353 . - . ID=gene-CCO56_RS06235;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=CCO56_RS06235;old_locus_tag=CCO56_06235 NZ_NPMB01000002.1 Protein Homology CDS 553415 554353 . - 0 ID=cds-WP_000091249.1;Parent=gene-CCO56_RS06235;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=CCO56_RS06235;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 554353 555483 . - . ID=gene-CCO56_RS06240;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=CCO56_RS06240;old_locus_tag=CCO56_06240 NZ_NPMB01000002.1 Protein Homology CDS 554353 555483 . - 0 ID=cds-WP_000487284.1;Parent=gene-CCO56_RS06240;Dbxref=GenBank:WP_000487284.1;Name=WP_000487284.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=CCO56_RS06240;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487284.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 555852 557033 . + . ID=gene-CCO56_RS06245;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=CCO56_RS06245;old_locus_tag=CCO56_06245 NZ_NPMB01000002.1 Protein Homology CDS 555852 557033 . + 0 ID=cds-WP_000551934.1;Parent=gene-CCO56_RS06245;Dbxref=GenBank:WP_000551934.1;Name=WP_000551934.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=CCO56_RS06245;product=sugar efflux transporter SetB;protein_id=WP_000551934.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 557098 557763 . - . ID=gene-CCO56_RS06250;Name=CCO56_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06250;old_locus_tag=CCO56_06250 NZ_NPMB01000002.1 Protein Homology CDS 557098 557763 . - 0 ID=cds-WP_023136830.1;Parent=gene-CCO56_RS06250;Dbxref=GenBank:WP_023136830.1;Name=WP_023136830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=CCO56_RS06250;product=GNVR domain-containing protein;protein_id=WP_023136830.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 557765 557887 . - . ID=gene-CCO56_RS06255;Name=CCO56_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06255;old_locus_tag=CCO56_06255 NZ_NPMB01000002.1 Protein Homology CDS 557765 557887 . - 0 ID=cds-WP_001519564.1;Parent=gene-CCO56_RS06255;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=CCO56_RS06255;product=membrane protein;protein_id=WP_001519564.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 558275 558529 . - . ID=gene-CCO56_RS06260;Name=CCO56_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06260;old_locus_tag=CCO56_06260 NZ_NPMB01000002.1 Protein Homology CDS 558275 558529 . - 0 ID=cds-WP_001528509.1;Parent=gene-CCO56_RS06260;Dbxref=GenBank:WP_001528509.1;Name=WP_001528509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=CCO56_RS06260;product=YkgJ family cysteine cluster protein;protein_id=WP_001528509.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 558854 559426 . + . ID=gene-CCO56_RS06270;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=CCO56_RS06270;old_locus_tag=CCO56_06270 NZ_NPMB01000002.1 Protein Homology CDS 558854 559426 . + 0 ID=cds-WP_001136822.1;Parent=gene-CCO56_RS06270;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=CCO56_RS06270;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 559638 560624 . + . ID=gene-CCO56_RS06275;Name=CCO56_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06275;old_locus_tag=CCO56_06275 NZ_NPMB01000002.1 Protein Homology CDS 559638 560624 . + 0 ID=cds-WP_000169351.1;Parent=gene-CCO56_RS06275;Dbxref=GenBank:WP_000169351.1;Name=WP_000169351.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=CCO56_RS06275;product=CobW family GTP-binding protein;protein_id=WP_000169351.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 560654 561373 . + . ID=gene-CCO56_RS06280;Name=CCO56_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06280;old_locus_tag=CCO56_06280 NZ_NPMB01000002.1 Protein Homology CDS 560654 561373 . + 0 ID=cds-WP_000178091.1;Parent=gene-CCO56_RS06280;Dbxref=GenBank:WP_000178091.1;Name=WP_000178091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=CCO56_RS06280;product=phosphatase PAP2 family protein;protein_id=WP_000178091.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 561787 562359 . + . ID=gene-CCO56_RS06290;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=CCO56_RS06290;old_locus_tag=CCO56_06290 NZ_NPMB01000002.1 Protein Homology CDS 561787 562359 . + 0 ID=cds-WP_000241015.1;Parent=gene-CCO56_RS06290;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=CCO56_RS06290;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 562685 564241 . + . ID=gene-CCO56_RS06300;Name=CCO56_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06300;old_locus_tag=CCO56_06300 NZ_NPMB01000002.1 Protein Homology CDS 562685 564241 . + 0 ID=cds-WP_000957762.1;Parent=gene-CCO56_RS06300;Dbxref=GenBank:WP_000957762.1;Name=WP_000957762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=CCO56_RS06300;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000957762.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 564348 566153 . + . ID=gene-CCO56_RS06305;Name=CCO56_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06305;old_locus_tag=CCO56_06305 NZ_NPMB01000002.1 Protein Homology CDS 564348 566153 . + 0 ID=cds-WP_079982658.1;Parent=gene-CCO56_RS06305;Dbxref=GenBank:WP_079982658.1;Name=WP_079982658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=CCO56_RS06305;product=extracellular solute-binding protein;protein_id=WP_079982658.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 566163 567257 . + . ID=gene-CCO56_RS06310;Name=CCO56_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06310;old_locus_tag=CCO56_06310 NZ_NPMB01000002.1 Protein Homology CDS 566163 567257 . + 0 ID=cds-WP_000501625.1;Parent=gene-CCO56_RS06310;Dbxref=GenBank:WP_000501625.1;Name=WP_000501625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=CCO56_RS06310;product=microcin C ABC transporter permease YejB;protein_id=WP_000501625.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 567257 568282 . + . ID=gene-CCO56_RS06315;Name=CCO56_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06315;old_locus_tag=CCO56_06315 NZ_NPMB01000002.1 Protein Homology CDS 567257 568282 . + 0 ID=cds-WP_001137761.1;Parent=gene-CCO56_RS06315;Dbxref=GenBank:WP_001137761.1;Name=WP_001137761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=CCO56_RS06315;product=ABC transporter permease;protein_id=WP_001137761.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 568284 569873 . + . ID=gene-CCO56_RS06320;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=CCO56_RS06320;old_locus_tag=CCO56_06320 NZ_NPMB01000002.1 Protein Homology CDS 568284 569873 . + 0 ID=cds-WP_058214846.1;Parent=gene-CCO56_RS06320;Dbxref=GenBank:WP_058214846.1;Name=WP_058214846.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=CCO56_RS06320;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_058214846.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 569877 570221 . - . ID=gene-CCO56_RS06325;Name=CCO56_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06325;old_locus_tag=CCO56_06325 NZ_NPMB01000002.1 Protein Homology CDS 569877 570221 . - 0 ID=cds-WP_001094639.1;Parent=gene-CCO56_RS06325;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=CCO56_RS06325;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 570612 571802 . - . ID=gene-CCO56_RS06335;Name=CCO56_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06335;old_locus_tag=CCO56_06335 NZ_NPMB01000002.1 Protein Homology CDS 570612 571802 . - 0 ID=cds-WP_000213349.1;Parent=gene-CCO56_RS06335;Dbxref=GenBank:WP_000213349.1;Name=WP_000213349.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=CCO56_RS06335;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213349.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 571830 572525 . - . ID=gene-CCO56_RS06340;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=CCO56_RS06340;old_locus_tag=CCO56_06340 NZ_NPMB01000002.1 Protein Homology CDS 571830 572525 . - 0 ID=cds-WP_001234836.1;Parent=gene-CCO56_RS06340;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=CCO56_RS06340;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 572677 574437 . + . ID=gene-CCO56_RS06345;Name=CCO56_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06345;old_locus_tag=CCO56_06345 NZ_NPMB01000002.1 Protein Homology CDS 572677 574437 . + 0 ID=cds-WP_023217331.1;Parent=gene-CCO56_RS06345;Dbxref=GenBank:WP_023217331.1;Name=WP_023217331.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=CCO56_RS06345;product=DEAD/DEAH box helicase;protein_id=WP_023217331.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 574562 574846 . + . ID=gene-CCO56_RS06350;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=CCO56_RS06350;old_locus_tag=CCO56_06350 NZ_NPMB01000002.1 Protein Homology CDS 574562 574846 . + 0 ID=cds-WP_000494192.1;Parent=gene-CCO56_RS06350;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=CCO56_RS06350;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 574967 575974 . - . ID=gene-CCO56_RS06355;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=CCO56_RS06355;old_locus_tag=CCO56_06355 NZ_NPMB01000002.1 Protein Homology CDS 574967 575974 . - 0 ID=cds-WP_000050806.1;Parent=gene-CCO56_RS06355;Dbxref=GenBank:WP_000050806.1;Name=WP_000050806.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=CCO56_RS06355;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 576154 576381 . + . ID=gene-CCO56_RS06360;Name=CCO56_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06360;old_locus_tag=CCO56_06360 NZ_NPMB01000002.1 Protein Homology CDS 576154 576381 . + 0 ID=cds-WP_001135904.1;Parent=gene-CCO56_RS06360;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=CCO56_RS06360;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 576413 578173 . + . ID=gene-CCO56_RS06365;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=CCO56_RS06365;old_locus_tag=CCO56_06365 NZ_NPMB01000002.1 Protein Homology CDS 576413 578173 . + 0 ID=cds-WP_001645270.1;Parent=gene-CCO56_RS06365;Dbxref=GenBank:WP_001645270.1;Name=WP_001645270.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=CCO56_RS06365;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_001645270.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 578247 578323 . + . ID=gene-CCO56_RS06370;Name=CCO56_RS06370;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS06370;old_locus_tag=CCO56_06370 NZ_NPMB01000002.1 tRNAscan-SE tRNA 578247 578323 . + . ID=rna-CCO56_RS06370;Parent=gene-CCO56_RS06370;anticodon=(pos:578281..578283);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS06370;product=tRNA-Pro NZ_NPMB01000002.1 tRNAscan-SE exon 578247 578323 . + . ID=exon-CCO56_RS06370-1;Parent=rna-CCO56_RS06370;anticodon=(pos:578281..578283);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS06370;product=tRNA-Pro NZ_NPMB01000002.1 RefSeq pseudogene 578279 578371 . + . ID=gene-CCO56_RS23705;Name=CCO56_RS23705;end_range=578371,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23705;old_locus_tag=CCO56_06375;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 578279 578371 . + 0 ID=cds-CCO56_RS23705;Parent=gene-CCO56_RS23705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=578371,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=CCO56_RS23705;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 578365 578568 . + . ID=gene-CCO56_RS06380;Name=CCO56_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06380;old_locus_tag=CCO56_06380 NZ_NPMB01000002.1 Protein Homology CDS 578365 578568 . + 0 ID=cds-WP_023213884.1;Parent=gene-CCO56_RS06380;Dbxref=GenBank:WP_023213884.1;Name=WP_023213884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=CCO56_RS06380;product=MsgA-like virulence protein;protein_id=WP_023213884.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 578761 579324 . - . ID=gene-CCO56_RS06385;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=CCO56_RS06385;old_locus_tag=CCO56_06385 NZ_NPMB01000002.1 Protein Homology CDS 578761 579324 . - 0 ID=cds-WP_000281869.1;Parent=gene-CCO56_RS06385;Dbxref=GenBank:WP_000281869.1;Name=WP_000281869.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=CCO56_RS06385;product=lipid A 3-O-deacylase PagL;protein_id=WP_000281869.1;transl_table=11 NZ_NPMB01000002.1 RefSeq gene 580141 580788 . + . ID=gene-CCO56_RS06400;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=CCO56_RS06400;old_locus_tag=CCO56_06400 NZ_NPMB01000002.1 Protein Homology CDS 580141 580788 . + 0 ID=cds-WP_001115500.1;Parent=gene-CCO56_RS06400;Dbxref=GenBank:WP_001115500.1;Name=WP_001115500.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=CCO56_RS06400;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115500.1;transl_table=11 NZ_NPMB01000002.1 RefSeq pseudogene 580832 580917 . - . ID=gene-CCO56_RS23710;Name=CCO56_RS23710;end_range=580917,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23710;partial=true;pseudo=true NZ_NPMB01000002.1 Protein Homology CDS 580832 580917 . - 2 ID=cds-CCO56_RS23710;Parent=gene-CCO56_RS23710;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=580917,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO56_RS23710;partial=true;product=heme lyase subunit;pseudo=true;transl_table=11 ##sequence-region NZ_NPMB01000020.1 1 6311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000020.1 RefSeq region 1 6311 . + . ID=NZ_NPMB01000020.1:1..6311;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000020.1 RefSeq gene 42 1085 . - . ID=gene-CCO56_RS23050;Name=CCO56_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23050;old_locus_tag=CCO56_23035 NZ_NPMB01000020.1 Protein Homology CDS 42 1085 . - 0 ID=cds-WP_080177099.1;Parent=gene-CCO56_RS23050;Dbxref=GenBank:WP_080177099.1;Name=WP_080177099.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=CCO56_RS23050;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_080177099.1;transl_table=11 NZ_NPMB01000020.1 RefSeq gene 1082 1639 . - . ID=gene-CCO56_RS23055;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=CCO56_RS23055;old_locus_tag=CCO56_23040 NZ_NPMB01000020.1 Protein Homology CDS 1082 1639 . - 0 ID=cds-WP_000828299.1;Parent=gene-CCO56_RS23055;Dbxref=GenBank:WP_000828299.1;Name=WP_000828299.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=CCO56_RS23055;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828299.1;transl_table=11 NZ_NPMB01000020.1 RefSeq gene 1636 3567 . - . ID=gene-CCO56_RS23060;Name=CCO56_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23060;old_locus_tag=CCO56_23045 NZ_NPMB01000020.1 Protein Homology CDS 1636 3567 . - 0 ID=cds-WP_000982525.1;Parent=gene-CCO56_RS23060;Dbxref=GenBank:WP_000982525.1;Name=WP_000982525.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=CCO56_RS23060;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_000982525.1;transl_table=11 NZ_NPMB01000020.1 RefSeq gene 3564 4043 . - . ID=gene-CCO56_RS23065;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=CCO56_RS23065;old_locus_tag=CCO56_23050 NZ_NPMB01000020.1 Protein Homology CDS 3564 4043 . - 0 ID=cds-WP_001053598.1;Parent=gene-CCO56_RS23065;Dbxref=GenBank:WP_001053598.1;Name=WP_001053598.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=CCO56_RS23065;product=cytochrome c maturation protein CcmE;protein_id=WP_001053598.1;transl_table=11 NZ_NPMB01000020.1 RefSeq gene 4040 4252 . - . ID=gene-CCO56_RS23070;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=CCO56_RS23070;old_locus_tag=CCO56_23055 NZ_NPMB01000020.1 Protein Homology CDS 4040 4252 . - 0 ID=cds-WP_000074110.1;Parent=gene-CCO56_RS23070;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=CCO56_RS23070;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11 NZ_NPMB01000020.1 RefSeq gene 4249 4986 . - . ID=gene-CCO56_RS23075;Name=CCO56_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23075;old_locus_tag=CCO56_23060 NZ_NPMB01000020.1 Protein Homology CDS 4249 4986 . - 0 ID=cds-WP_000265994.1;Parent=gene-CCO56_RS23075;Dbxref=GenBank:WP_000265994.1;Name=WP_000265994.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO56_RS23075;product=heme ABC transporter permease;protein_id=WP_000265994.1;transl_table=11 NZ_NPMB01000020.1 RefSeq gene 5038 5697 . - . ID=gene-CCO56_RS23080;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO56_RS23080;old_locus_tag=CCO56_23065 NZ_NPMB01000020.1 Protein Homology CDS 5038 5697 . - 0 ID=cds-WP_000990033.1;Parent=gene-CCO56_RS23080;Dbxref=GenBank:WP_000990033.1;Name=WP_000990033.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO56_RS23080;product=heme exporter protein CcmB;protein_id=WP_000990033.1;transl_table=11 NZ_NPMB01000020.1 RefSeq gene 5694 6311 . - . ID=gene-CCO56_RS23085;Name=ccmA;end_range=6311,.;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO56_RS23085;old_locus_tag=CCO56_23070;partial=true NZ_NPMB01000020.1 Protein Homology CDS 5694 6311 . - 0 ID=cds-WP_080177108.1;Parent=gene-CCO56_RS23085;Dbxref=GenBank:WP_080177108.1;Name=WP_080177108.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;end_range=6311,.;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO56_RS23085;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_080177108.1;transl_table=11 ##sequence-region NZ_NPMB01000021.1 1 4518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000021.1 RefSeq region 1 4518 . + . ID=NZ_NPMB01000021.1:1..4518;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000021.1 RefSeq gene 5 120 . + . ID=gene-CCO56_RS23090;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO56_RS23090;old_locus_tag=CCO56_23075 NZ_NPMB01000021.1 cmsearch rRNA 5 120 . + . ID=rna-CCO56_RS23090;Parent=gene-CCO56_RS23090;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23090;product=5S ribosomal RNA NZ_NPMB01000021.1 cmsearch exon 5 120 . + . ID=exon-CCO56_RS23090-1;Parent=rna-CCO56_RS23090;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23090;product=5S ribosomal RNA NZ_NPMB01000021.1 RefSeq gene 302 1330 . + . ID=gene-CCO56_RS23095;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CCO56_RS23095;old_locus_tag=CCO56_23080 NZ_NPMB01000021.1 Protein Homology CDS 302 1330 . + 0 ID=cds-WP_000149798.1;Parent=gene-CCO56_RS23095;Dbxref=GenBank:WP_000149798.1;Name=WP_000149798.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=CCO56_RS23095;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149798.1;transl_table=11 NZ_NPMB01000021.1 RefSeq gene 1327 2289 . + . ID=gene-CCO56_RS23100;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=CCO56_RS23100;old_locus_tag=CCO56_23085 NZ_NPMB01000021.1 Protein Homology CDS 1327 2289 . + 0 ID=cds-WP_000655746.1;Parent=gene-CCO56_RS23100;Dbxref=GenBank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=CCO56_RS23100;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11 NZ_NPMB01000021.1 RefSeq gene 2324 3274 . - . ID=gene-CCO56_RS23105;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=CCO56_RS23105;old_locus_tag=CCO56_23090 NZ_NPMB01000021.1 Protein Homology CDS 2324 3274 . - 0 ID=cds-WP_000023068.1;Parent=gene-CCO56_RS23105;Dbxref=GenBank:WP_000023068.1;Name=WP_000023068.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=CCO56_RS23105;product=type I pantothenate kinase;protein_id=WP_000023068.1;transl_table=11 NZ_NPMB01000021.1 RefSeq gene 3483 3656 . - . ID=gene-CCO56_RS23115;Name=CCO56_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23115;old_locus_tag=CCO56_23100 NZ_NPMB01000021.1 Protein Homology CDS 3483 3656 . - 0 ID=cds-WP_001541267.1;Parent=gene-CCO56_RS23115;Dbxref=GenBank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=CCO56_RS23115;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11 NZ_NPMB01000021.1 RefSeq gene 3676 3751 . + . ID=gene-CCO56_RS23120;Name=CCO56_RS23120;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS23120;old_locus_tag=CCO56_23105 NZ_NPMB01000021.1 tRNAscan-SE tRNA 3676 3751 . + . ID=rna-CCO56_RS23120;Parent=gene-CCO56_RS23120;anticodon=(pos:3709..3711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23120;product=tRNA-Thr NZ_NPMB01000021.1 tRNAscan-SE exon 3676 3751 . + . ID=exon-CCO56_RS23120-1;Parent=rna-CCO56_RS23120;anticodon=(pos:3709..3711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23120;product=tRNA-Thr NZ_NPMB01000021.1 RefSeq gene 3760 3844 . + . ID=gene-CCO56_RS23125;Name=CCO56_RS23125;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS23125;old_locus_tag=CCO56_23110 NZ_NPMB01000021.1 tRNAscan-SE tRNA 3760 3844 . + . ID=rna-CCO56_RS23125;Parent=gene-CCO56_RS23125;anticodon=(pos:3794..3796);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23125;product=tRNA-Tyr NZ_NPMB01000021.1 tRNAscan-SE exon 3760 3844 . + . ID=exon-CCO56_RS23125-1;Parent=rna-CCO56_RS23125;anticodon=(pos:3794..3796);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23125;product=tRNA-Tyr NZ_NPMB01000021.1 RefSeq gene 3961 4035 . + . ID=gene-CCO56_RS23130;Name=CCO56_RS23130;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS23130;old_locus_tag=CCO56_23115 NZ_NPMB01000021.1 tRNAscan-SE tRNA 3961 4035 . + . ID=rna-CCO56_RS23130;Parent=gene-CCO56_RS23130;anticodon=(pos:3994..3996);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23130;product=tRNA-Gly NZ_NPMB01000021.1 tRNAscan-SE exon 3961 4035 . + . ID=exon-CCO56_RS23130-1;Parent=rna-CCO56_RS23130;anticodon=(pos:3994..3996);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23130;product=tRNA-Gly NZ_NPMB01000021.1 RefSeq gene 4042 4117 . + . ID=gene-CCO56_RS23135;Name=CCO56_RS23135;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS23135;old_locus_tag=CCO56_23120 NZ_NPMB01000021.1 tRNAscan-SE tRNA 4042 4117 . + . ID=rna-CCO56_RS23135;Parent=gene-CCO56_RS23135;anticodon=(pos:4075..4077);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23135;product=tRNA-Thr NZ_NPMB01000021.1 tRNAscan-SE exon 4042 4117 . + . ID=exon-CCO56_RS23135-1;Parent=rna-CCO56_RS23135;anticodon=(pos:4075..4077);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23135;product=tRNA-Thr NZ_NPMB01000021.1 RefSeq gene 4233 4518 . + . ID=gene-CCO56_RS23140;Name=CCO56_RS23140;end_range=4518,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23140;old_locus_tag=CCO56_23125;partial=true NZ_NPMB01000021.1 Protein Homology CDS 4233 4518 . + 0 ID=cds-WP_000031682.1;Parent=gene-CCO56_RS23140;Dbxref=GenBank:WP_000031682.1;Name=WP_000031682.1;Ontology_term=GO:0003924,GO:0005525;end_range=4518,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO56_RS23140;partial=true;product=GTP-binding protein;protein_id=WP_000031682.1;transl_table=11 ##sequence-region NZ_NPMB01000022.1 1 1946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000022.1 RefSeq region 1 1946 . + . ID=NZ_NPMB01000022.1:1..1946;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000022.1 RefSeq gene 1 1151 . - . ID=gene-CCO56_RS23145;Name=CCO56_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23145;old_locus_tag=CCO56_23130;partial=true;start_range=.,1 NZ_NPMB01000022.1 Protein Homology CDS 1 1151 . - 0 ID=cds-WP_094882075.1;Parent=gene-CCO56_RS23145;Dbxref=GenBank:WP_094882075.1;Name=WP_094882075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO56_RS23145;partial=true;product=oxaloacetate decarboxylase subunit beta;protein_id=WP_094882075.1;start_range=.,1;transl_table=11 NZ_NPMB01000022.1 RefSeq gene 1164 1946 . - . ID=gene-CCO56_RS23150;Name=CCO56_RS23150;end_range=1946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23150;old_locus_tag=CCO56_23135;partial=true NZ_NPMB01000022.1 Protein Homology CDS 1164 1946 . - 0 ID=cds-WP_141034759.1;Parent=gene-CCO56_RS23150;Dbxref=GenBank:WP_141034759.1;Name=WP_141034759.1;end_range=1946,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO56_RS23150;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_141034759.1;transl_table=11 ##sequence-region NZ_NPMB01000023.1 1 1887 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000023.1 RefSeq region 1 1887 . + . ID=NZ_NPMB01000023.1:1..1887;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000023.1 RefSeq gene 1 512 . + . ID=gene-CCO56_RS23155;Name=CCO56_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23155;old_locus_tag=CCO56_23140;partial=true;start_range=.,1 NZ_NPMB01000023.1 Protein Homology CDS 1 512 . + 2 ID=cds-WP_001598101.1;Parent=gene-CCO56_RS23155;Dbxref=GenBank:WP_001598101.1;Name=WP_001598101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243576.1;locus_tag=CCO56_RS23155;partial=true;product=phage tail protein;protein_id=WP_001598101.1;start_range=.,1;transl_table=11 NZ_NPMB01000023.1 RefSeq gene 512 1114 . + . ID=gene-CCO56_RS23160;Name=CCO56_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23160;old_locus_tag=CCO56_23145 NZ_NPMB01000023.1 Protein Homology CDS 512 1114 . + 0 ID=cds-WP_080177007.1;Parent=gene-CCO56_RS23160;Dbxref=GenBank:WP_080177007.1;Name=WP_080177007.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415674.1;locus_tag=CCO56_RS23160;product=tail fiber assembly protein;protein_id=WP_080177007.1;transl_table=11 NZ_NPMB01000023.1 RefSeq gene 1086 1526 . - . ID=gene-CCO56_RS23165;Name=CCO56_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23165;old_locus_tag=CCO56_23150 NZ_NPMB01000023.1 Protein Homology CDS 1086 1526 . - 0 ID=cds-WP_053530364.1;Parent=gene-CCO56_RS23165;Dbxref=GenBank:WP_053530364.1;Name=WP_053530364.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748181.1;locus_tag=CCO56_RS23165;product=tail fiber assembly protein;protein_id=WP_053530364.1;transl_table=11 NZ_NPMB01000023.1 RefSeq gene 1529 1887 . - . ID=gene-CCO56_RS23920;Name=CCO56_RS23920;end_range=1887,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23920;old_locus_tag=CCO56_23155;partial=true NZ_NPMB01000023.1 Protein Homology CDS 1529 1887 . - 2 ID=cds-WP_087892816.1;Parent=gene-CCO56_RS23920;Dbxref=GenBank:WP_087892816.1;Name=WP_087892816.1;end_range=1887,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164526.1;locus_tag=CCO56_RS23920;partial=true;product=gp53-like domain-containing protein;protein_id=WP_087892816.1;transl_table=11 ##sequence-region NZ_NPMB01000024.1 1 1623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000024.1 RefSeq region 1 1623 . + . ID=NZ_NPMB01000024.1:1..1623;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000024.1 RefSeq gene 79 1620 . + . ID=gene-CCO56_RS23175;Name=CCO56_RS23175;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS23175;old_locus_tag=CCO56_23160 NZ_NPMB01000024.1 cmsearch rRNA 79 1620 . + . ID=rna-CCO56_RS23175;Parent=gene-CCO56_RS23175;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23175;product=16S ribosomal RNA NZ_NPMB01000024.1 cmsearch exon 79 1620 . + . ID=exon-CCO56_RS23175-1;Parent=rna-CCO56_RS23175;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23175;product=16S ribosomal RNA ##sequence-region NZ_NPMB01000025.1 1 1618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000025.1 RefSeq region 1 1618 . + . ID=NZ_NPMB01000025.1:1..1618;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000025.1 RefSeq gene 1 1618 . - . ID=gene-CCO56_RS23180;Name=CCO56_RS23180;end_range=1618,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS23180;old_locus_tag=CCO56_23165;partial=true;start_range=.,1 NZ_NPMB01000025.1 cmsearch rRNA 1 1618 . - . ID=rna-CCO56_RS23180;Parent=gene-CCO56_RS23180;Dbxref=RFAM:RF02541;end_range=1618,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23180;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000025.1 cmsearch exon 1 1618 . - . ID=exon-CCO56_RS23180-1;Parent=rna-CCO56_RS23180;Dbxref=RFAM:RF02541;end_range=1618,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23180;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPMB01000026.1 1 1312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000026.1 RefSeq region 1 1312 . + . ID=NZ_NPMB01000026.1:1..1312;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000026.1 RefSeq gene 54 1309 . + . ID=gene-CCO56_RS23185;Name=CCO56_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23185;old_locus_tag=CCO56_23170 NZ_NPMB01000026.1 Protein Homology CDS 54 405 . + 0 ID=cds-WP_094742629.1;Parent=gene-CCO56_RS23185;Dbxref=GenBank:WP_094742629.1;Name=WP_094742629.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO56_RS23185;product=IS3-like element ISSen1 family transposase;protein_id=WP_094742629.1;transl_table=11 NZ_NPMB01000026.1 Protein Homology CDS 405 1309 . + 2 ID=cds-WP_094742629.1;Parent=gene-CCO56_RS23185;Dbxref=GenBank:WP_094742629.1;Name=WP_094742629.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=CCO56_RS23185;product=IS3-like element ISSen1 family transposase;protein_id=WP_094742629.1;transl_table=11 ##sequence-region NZ_NPMB01000027.1 1 1019 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000027.1 RefSeq region 1 1019 . + . ID=NZ_NPMB01000027.1:1..1019;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000027.1 RefSeq gene 1 1019 . + . ID=gene-CCO56_RS23190;Name=tuf;end_range=1019,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CCO56_RS23190;old_locus_tag=CCO56_23175;partial=true;start_range=.,1 NZ_NPMB01000027.1 Protein Homology CDS 1 1019 . + 0 ID=cds-WP_001543627.1;Parent=gene-CCO56_RS23190;Dbxref=GenBank:WP_001543627.1;Name=WP_001543627.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=1019,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=CCO56_RS23190;partial=true;product=elongation factor Tu;protein_id=WP_001543627.1;start_range=.,1;transl_table=11 ##sequence-region NZ_NPMB01000028.1 1 880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000028.1 RefSeq region 1 880 . + . ID=NZ_NPMB01000028.1:1..880;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000028.1 RefSeq gene 1 241 . - . ID=gene-CCO56_RS23195;Name=CCO56_RS23195;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS23195;old_locus_tag=CCO56_23180;partial=true;start_range=.,1 NZ_NPMB01000028.1 cmsearch rRNA 1 241 . - . ID=rna-CCO56_RS23195;Parent=gene-CCO56_RS23195;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23195;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000028.1 cmsearch exon 1 241 . - . ID=exon-CCO56_RS23195-1;Parent=rna-CCO56_RS23195;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23195;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000028.1 RefSeq gene 424 499 . - . ID=gene-CCO56_RS23200;Name=CCO56_RS23200;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS23200;old_locus_tag=CCO56_23185 NZ_NPMB01000028.1 tRNAscan-SE tRNA 424 499 . - . ID=rna-CCO56_RS23200;Parent=gene-CCO56_RS23200;anticodon=(pos:complement(464..466));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23200;product=tRNA-Ala NZ_NPMB01000028.1 tRNAscan-SE exon 424 499 . - . ID=exon-CCO56_RS23200-1;Parent=rna-CCO56_RS23200;anticodon=(pos:complement(464..466));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23200;product=tRNA-Ala NZ_NPMB01000028.1 RefSeq gene 611 687 . - . ID=gene-CCO56_RS23205;Name=CCO56_RS23205;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS23205;old_locus_tag=CCO56_23190 NZ_NPMB01000028.1 tRNAscan-SE tRNA 611 687 . - . ID=rna-CCO56_RS23205;Parent=gene-CCO56_RS23205;anticodon=(pos:complement(651..653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23205;product=tRNA-Ile NZ_NPMB01000028.1 tRNAscan-SE exon 611 687 . - . ID=exon-CCO56_RS23205-1;Parent=rna-CCO56_RS23205;anticodon=(pos:complement(651..653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23205;product=tRNA-Ile NZ_NPMB01000028.1 RefSeq gene 757 880 . - . ID=gene-CCO56_RS23210;Name=CCO56_RS23210;end_range=880,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS23210;old_locus_tag=CCO56_23195;partial=true NZ_NPMB01000028.1 cmsearch rRNA 757 880 . - . ID=rna-CCO56_RS23210;Parent=gene-CCO56_RS23210;Dbxref=RFAM:RF00177;end_range=880,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23210;partial=true;product=16S ribosomal RNA NZ_NPMB01000028.1 cmsearch exon 757 880 . - . ID=exon-CCO56_RS23210-1;Parent=rna-CCO56_RS23210;Dbxref=RFAM:RF00177;end_range=880,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23210;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPMB01000029.1 1 758 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000029.1 RefSeq region 1 758 . + . ID=NZ_NPMB01000029.1:1..758;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000029.1 RefSeq gene 1 124 . + . ID=gene-CCO56_RS23215;Name=CCO56_RS23215;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS23215;old_locus_tag=CCO56_23200;partial=true;start_range=.,1 NZ_NPMB01000029.1 cmsearch rRNA 1 124 . + . ID=rna-CCO56_RS23215;Parent=gene-CCO56_RS23215;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23215;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPMB01000029.1 cmsearch exon 1 124 . + . ID=exon-CCO56_RS23215-1;Parent=rna-CCO56_RS23215;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23215;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_NPMB01000029.1 RefSeq gene 210 285 . + . ID=gene-CCO56_RS23220;Name=CCO56_RS23220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS23220;old_locus_tag=CCO56_23205 NZ_NPMB01000029.1 tRNAscan-SE tRNA 210 285 . + . ID=rna-CCO56_RS23220;Parent=gene-CCO56_RS23220;anticodon=(pos:244..246);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23220;product=tRNA-Glu NZ_NPMB01000029.1 tRNAscan-SE exon 210 285 . + . ID=exon-CCO56_RS23220-1;Parent=rna-CCO56_RS23220;anticodon=(pos:244..246);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23220;product=tRNA-Glu NZ_NPMB01000029.1 RefSeq gene 518 758 . + . ID=gene-CCO56_RS23225;Name=CCO56_RS23225;end_range=758,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS23225;old_locus_tag=CCO56_23210;partial=true NZ_NPMB01000029.1 cmsearch rRNA 518 758 . + . ID=rna-CCO56_RS23225;Parent=gene-CCO56_RS23225;Dbxref=RFAM:RF02541;end_range=758,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23225;partial=true;product=23S ribosomal RNA NZ_NPMB01000029.1 cmsearch exon 518 758 . + . ID=exon-CCO56_RS23225-1;Parent=rna-CCO56_RS23225;Dbxref=RFAM:RF02541;end_range=758,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23225;partial=true;product=23S ribosomal RNA ##sequence-region NZ_NPMB01000003.1 1 473075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000003.1 RefSeq region 1 473075 . + . ID=NZ_NPMB01000003.1:1..473075;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000003.1 RefSeq gene 1 278 . + . ID=gene-CCO56_RS06405;Name=CCO56_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06405;old_locus_tag=CCO56_06405;partial=true;start_range=.,1 NZ_NPMB01000003.1 Protein Homology CDS 1 278 . + 2 ID=cds-WP_141034753.1;Parent=gene-CCO56_RS06405;Dbxref=GenBank:WP_141034753.1;Name=WP_141034753.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO56_RS06405;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_141034753.1;start_range=.,1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 413 2032 . + . ID=gene-CCO56_RS06410;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=CCO56_RS06410;old_locus_tag=CCO56_06410 NZ_NPMB01000003.1 Protein Homology CDS 413 2032 . + 0 ID=cds-WP_001563099.1;Parent=gene-CCO56_RS06410;Dbxref=GenBank:WP_001563099.1;Name=WP_001563099.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=CCO56_RS06410;product=citrate sensor histidine kinase CitA;protein_id=WP_001563099.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 2034 2720 . + . ID=gene-CCO56_RS06415;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=CCO56_RS06415;old_locus_tag=CCO56_06415 NZ_NPMB01000003.1 Protein Homology CDS 2034 2720 . + 0 ID=cds-WP_000377415.1;Parent=gene-CCO56_RS06415;Dbxref=GenBank:WP_000377415.1;Name=WP_000377415.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=CCO56_RS06415;product=citrate response regulator transcription factor CitB;protein_id=WP_000377415.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 2742 3662 . - . ID=gene-CCO56_RS06420;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CCO56_RS06420;old_locus_tag=CCO56_06420 NZ_NPMB01000003.1 Protein Homology CDS 2742 3662 . - 0 ID=cds-WP_000741408.1;Parent=gene-CCO56_RS06420;Dbxref=GenBank:WP_000741408.1;Name=WP_000741408.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=CCO56_RS06420;product=ribonucleoside hydrolase RihC;protein_id=WP_000741408.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 3678 4880 . - . ID=gene-CCO56_RS06425;Name=CCO56_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06425;old_locus_tag=CCO56_06425 NZ_NPMB01000003.1 Protein Homology CDS 3678 4880 . - 0 ID=cds-WP_000516311.1;Parent=gene-CCO56_RS06425;Dbxref=GenBank:WP_000516311.1;Name=WP_000516311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=CCO56_RS06425;product=XAC2610-related protein;protein_id=WP_000516311.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 5080 6030 . - . ID=gene-CCO56_RS06430;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=CCO56_RS06430;old_locus_tag=CCO56_06430 NZ_NPMB01000003.1 Protein Homology CDS 5080 6030 . - 0 ID=cds-WP_001166422.1;Parent=gene-CCO56_RS06430;Dbxref=GenBank:WP_001166422.1;Name=WP_001166422.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=CCO56_RS06430;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166422.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 6033 6482 . - . ID=gene-CCO56_RS06435;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=CCO56_RS06435;old_locus_tag=CCO56_06435 NZ_NPMB01000003.1 Protein Homology CDS 6033 6482 . - 0 ID=cds-WP_000047269.1;Parent=gene-CCO56_RS06435;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=CCO56_RS06435;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 6637 7137 . - . ID=gene-CCO56_RS06440;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CCO56_RS06440;old_locus_tag=CCO56_06440 NZ_NPMB01000003.1 Protein Homology CDS 6637 7137 . - 0 ID=cds-WP_000042736.1;Parent=gene-CCO56_RS06440;Dbxref=GenBank:WP_000042736.1;Name=WP_000042736.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=CCO56_RS06440;product=signal peptidase II;protein_id=WP_000042736.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 7137 9971 . - . ID=gene-CCO56_RS06445;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CCO56_RS06445;old_locus_tag=CCO56_06445 NZ_NPMB01000003.1 Protein Homology CDS 7137 9971 . - 0 ID=cds-WP_001563101.1;Parent=gene-CCO56_RS06445;Dbxref=GenBank:WP_001563101.1;Name=WP_001563101.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=CCO56_RS06445;product=isoleucine--tRNA ligase;protein_id=WP_001563101.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 10016 10954 . - . ID=gene-CCO56_RS06450;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=CCO56_RS06450;old_locus_tag=CCO56_06450 NZ_NPMB01000003.1 Protein Homology CDS 10016 10954 . - 0 ID=cds-WP_000767311.1;Parent=gene-CCO56_RS06450;Dbxref=GenBank:WP_000767311.1;Name=WP_000767311.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=CCO56_RS06450;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 10962 11177 . - . ID=gene-CCO56_RS06455;Name=CCO56_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06455;old_locus_tag=CCO56_06455 NZ_NPMB01000003.1 Protein Homology CDS 10962 11177 . - 0 ID=cds-WP_001538903.1;Parent=gene-CCO56_RS06455;Dbxref=GenBank:WP_001538903.1;Name=WP_001538903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=CCO56_RS06455;product=DUF2575 family protein;protein_id=WP_001538903.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 11283 11546 . + . ID=gene-CCO56_RS06460;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CCO56_RS06460;old_locus_tag=CCO56_06460 NZ_NPMB01000003.1 Protein Homology CDS 11283 11546 . + 0 ID=cds-WP_001518655.1;Parent=gene-CCO56_RS06460;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=CCO56_RS06460;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 12007 13380 . + . ID=gene-CCO56_RS06465;Name=CCO56_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06465;old_locus_tag=CCO56_06465 NZ_NPMB01000003.1 Protein Homology CDS 12007 13380 . + 0 ID=cds-WP_000099988.1;Parent=gene-CCO56_RS06465;Dbxref=GenBank:WP_000099988.1;Name=WP_000099988.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=CCO56_RS06465;product=MFS transporter;protein_id=WP_000099988.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 13420 15459 . + . ID=gene-CCO56_RS06470;Name=CCO56_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06470;old_locus_tag=CCO56_06470 NZ_NPMB01000003.1 Protein Homology CDS 13420 15459 . + 0 ID=cds-WP_080177035.1;Parent=gene-CCO56_RS06470;Dbxref=GenBank:WP_080177035.1;Name=WP_080177035.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=CCO56_RS06470;product=glycoside hydrolase family 31 protein;protein_id=WP_080177035.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 15514 16413 . - . ID=gene-CCO56_RS06475;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=CCO56_RS06475;old_locus_tag=CCO56_06475 NZ_NPMB01000003.1 Protein Homology CDS 15514 16413 . - 0 ID=cds-WP_000062872.1;Parent=gene-CCO56_RS06475;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=CCO56_RS06475;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 16475 17641 . - . ID=gene-CCO56_RS06480;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CCO56_RS06480;old_locus_tag=CCO56_06480 NZ_NPMB01000003.1 Protein Homology CDS 16475 17641 . - 0 ID=cds-WP_000681340.1;Parent=gene-CCO56_RS06480;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=CCO56_RS06480;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 17804 18031 . - . ID=gene-CCO56_RS24100;Name=CCO56_RS24100;end_range=18031,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24100;old_locus_tag=CCO56_06485;partial=true;pseudo=true NZ_NPMB01000003.1 Protein Homology CDS 17804 18031 . - 0 ID=cds-CCO56_RS24100;Parent=gene-CCO56_RS24100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18031,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=CCO56_RS24100;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 17953 18210 . - . ID=gene-CCO56_RS24105;Name=CCO56_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24105;old_locus_tag=CCO56_06490 NZ_NPMB01000003.1 Protein Homology CDS 17953 18210 . - 0 ID=cds-WP_000528978.1;Parent=gene-CCO56_RS24105;Dbxref=GenBank:WP_000528978.1;Name=WP_000528978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=CCO56_RS24105;product=hypothetical protein;protein_id=WP_000528978.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 18329 19582 . - . ID=gene-CCO56_RS06495;Name=CCO56_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06495;old_locus_tag=CCO56_06495 NZ_NPMB01000003.1 Protein Homology CDS 18329 19582 . - 0 ID=cds-WP_000457885.1;Parent=gene-CCO56_RS06495;Dbxref=GenBank:WP_000457885.1;Name=WP_000457885.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=CCO56_RS06495;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_000457885.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 19600 20796 . - . ID=gene-CCO56_RS06500;Name=CCO56_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06500;old_locus_tag=CCO56_06500 NZ_NPMB01000003.1 Protein Homology CDS 19600 20796 . - 0 ID=cds-WP_001189142.1;Parent=gene-CCO56_RS06500;Dbxref=GenBank:WP_001189142.1;Name=WP_001189142.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=CCO56_RS06500;product=anaerobic sulfatase maturase;protein_id=WP_001189142.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 20900 22393 . - . ID=gene-CCO56_RS06505;Name=CCO56_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06505;old_locus_tag=CCO56_06505 NZ_NPMB01000003.1 Protein Homology CDS 20900 22393 . - 0 ID=cds-WP_000754364.1;Parent=gene-CCO56_RS06505;Dbxref=GenBank:WP_000754364.1;Name=WP_000754364.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=CCO56_RS06505;product=sulfatase family protein;protein_id=WP_000754364.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 22414 23178 . - . ID=gene-CCO56_RS06510;Name=CCO56_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06510;old_locus_tag=CCO56_06510 NZ_NPMB01000003.1 Protein Homology CDS 22414 23178 . - 0 ID=cds-WP_000052612.1;Parent=gene-CCO56_RS06510;Dbxref=GenBank:WP_000052612.1;Name=WP_000052612.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052612.1;locus_tag=CCO56_RS06510;product=outer membrane protein OmpK;protein_id=WP_000052612.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 23634 23930 . + . ID=gene-CCO56_RS06515;Name=CCO56_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06515;old_locus_tag=CCO56_06515 NZ_NPMB01000003.1 Protein Homology CDS 23634 23930 . + 0 ID=cds-WP_001542932.1;Parent=gene-CCO56_RS06515;Dbxref=GenBank:WP_001542932.1;Name=WP_001542932.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542932.1;locus_tag=CCO56_RS06515;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_001542932.1;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 24138 24317 . - . ID=gene-CCO56_RS06520;Name=CCO56_RS06520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS06520;old_locus_tag=CCO56_06520;partial=true;pseudo=true;start_range=.,24138 NZ_NPMB01000003.1 Protein Homology CDS 24138 24317 . - 0 ID=cds-CCO56_RS06520;Parent=gene-CCO56_RS06520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007726487.1;locus_tag=CCO56_RS06520;partial=true;product=arylsulfatase;pseudo=true;start_range=.,24138;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 25139 25532 . + . ID=gene-CCO56_RS24110;Name=CCO56_RS24110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24110;old_locus_tag=CCO56_06525;pseudo=true NZ_NPMB01000003.1 Protein Homology CDS 25139 25532 . + 0 ID=cds-CCO56_RS24110;Parent=gene-CCO56_RS24110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248824.1;locus_tag=CCO56_RS24110;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 25654 25938 . - . ID=gene-CCO56_RS06530;Name=CCO56_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06530;old_locus_tag=CCO56_06530 NZ_NPMB01000003.1 Protein Homology CDS 25654 25938 . - 0 ID=cds-WP_000558466.1;Parent=gene-CCO56_RS06530;Dbxref=GenBank:WP_000558466.1;Name=WP_000558466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000558466.1;locus_tag=CCO56_RS06530;product=hypothetical protein;protein_id=WP_000558466.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 26006 26851 . - . ID=gene-CCO56_RS06535;Name=CCO56_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06535;old_locus_tag=CCO56_06535 NZ_NPMB01000003.1 Protein Homology CDS 26006 26851 . - 0 ID=cds-WP_023214082.1;Parent=gene-CCO56_RS06535;Dbxref=GenBank:WP_023214082.1;Name=WP_023214082.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=CCO56_RS06535;product=DsbA family protein;protein_id=WP_023214082.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 26916 27647 . - . ID=gene-CCO56_RS06540;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=CCO56_RS06540;old_locus_tag=CCO56_06540 NZ_NPMB01000003.1 Protein Homology CDS 26916 27647 . - 0 ID=cds-WP_077909935.1;Parent=gene-CCO56_RS06540;Dbxref=GenBank:WP_077909935.1;Name=WP_077909935.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=CCO56_RS06540;product=fimbrial chaperone BcfG;protein_id=WP_077909935.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 27613 28131 . - . ID=gene-CCO56_RS06545;Name=CCO56_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06545;old_locus_tag=CCO56_06545 NZ_NPMB01000003.1 Protein Homology CDS 27613 28131 . - 0 ID=cds-WP_001632109.1;Parent=gene-CCO56_RS06545;Dbxref=GenBank:WP_001632109.1;Name=WP_001632109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=CCO56_RS06545;product=fimbrial protein BcfF;protein_id=WP_001632109.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 28147 28692 . - . ID=gene-CCO56_RS06550;Name=CCO56_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06550;old_locus_tag=CCO56_06550 NZ_NPMB01000003.1 Protein Homology CDS 28147 28692 . - 0 ID=cds-WP_001082038.1;Parent=gene-CCO56_RS06550;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=CCO56_RS06550;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 28693 29700 . - . ID=gene-CCO56_RS06555;Name=CCO56_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06555;old_locus_tag=CCO56_06555 NZ_NPMB01000003.1 Protein Homology CDS 28693 29700 . - 0 ID=cds-WP_000701256.1;Parent=gene-CCO56_RS06555;Dbxref=GenBank:WP_000701256.1;Name=WP_000701256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=CCO56_RS06555;product=fimbrial protein BcfD;protein_id=WP_000701256.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 29701 32322 . - . ID=gene-CCO56_RS06560;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=CCO56_RS06560;old_locus_tag=CCO56_06560 NZ_NPMB01000003.1 Protein Homology CDS 29701 32322 . - 0 ID=cds-WP_080177038.1;Parent=gene-CCO56_RS06560;Dbxref=GenBank:WP_080177038.1;Name=WP_080177038.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=CCO56_RS06560;product=fimbrial usher BcfC;protein_id=WP_080177038.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 32327 33013 . - . ID=gene-CCO56_RS06565;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=CCO56_RS06565;old_locus_tag=CCO56_06565 NZ_NPMB01000003.1 Protein Homology CDS 32327 33013 . - 0 ID=cds-WP_000742551.1;Parent=gene-CCO56_RS06565;Dbxref=GenBank:WP_000742551.1;Name=WP_000742551.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=CCO56_RS06565;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000742551.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 33114 33656 . - . ID=gene-CCO56_RS06570;Name=CCO56_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06570;old_locus_tag=CCO56_06570 NZ_NPMB01000003.1 Protein Homology CDS 33114 33656 . - 0 ID=cds-WP_000743356.1;Parent=gene-CCO56_RS06570;Dbxref=GenBank:WP_000743356.1;Name=WP_000743356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=CCO56_RS06570;product=fimbrial protein BcfA;protein_id=WP_000743356.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 34086 34790 . - . ID=gene-CCO56_RS06575;Name=CCO56_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06575;old_locus_tag=CCO56_06575 NZ_NPMB01000003.1 Protein Homology CDS 34086 34790 . - 0 ID=cds-WP_000738619.1;Parent=gene-CCO56_RS06575;Dbxref=GenBank:WP_000738619.1;Name=WP_000738619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=CCO56_RS06575;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000738619.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 35071 38067 . - . ID=gene-CCO56_RS06580;Name=CCO56_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06580;old_locus_tag=CCO56_06580 NZ_NPMB01000003.1 Protein Homology CDS 35071 38067 . - 0 ID=cds-WP_080177039.1;Parent=gene-CCO56_RS06580;Dbxref=GenBank:WP_080177039.1;Name=WP_080177039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=CCO56_RS06580;product=chitinase;protein_id=WP_080177039.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 38160 40259 . - . ID=gene-CCO56_RS06585;Name=CCO56_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06585;old_locus_tag=CCO56_06585 NZ_NPMB01000003.1 Protein Homology CDS 38160 40259 . - 0 ID=cds-WP_000235807.1;Parent=gene-CCO56_RS06585;Dbxref=GenBank:WP_000235807.1;Name=WP_000235807.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=CCO56_RS06585;product=glycosyl hydrolase family 18 protein;protein_id=WP_000235807.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 40640 41083 . + . ID=gene-CCO56_RS06590;Name=CCO56_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06590;old_locus_tag=CCO56_06590 NZ_NPMB01000003.1 Protein Homology CDS 40640 41083 . + 0 ID=cds-WP_000860681.1;Parent=gene-CCO56_RS06590;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=CCO56_RS06590;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 41100 41633 . + . ID=gene-CCO56_RS06595;Name=CCO56_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06595;old_locus_tag=CCO56_06595 NZ_NPMB01000003.1 Protein Homology CDS 41100 41633 . + 0 ID=cds-WP_023214086.1;Parent=gene-CCO56_RS06595;Dbxref=GenBank:WP_023214086.1;Name=WP_023214086.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=CCO56_RS06595;product=glycoside hydrolase family 108 protein;protein_id=WP_023214086.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 41694 42038 . - . ID=gene-CCO56_RS06600;Name=CCO56_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06600;old_locus_tag=CCO56_06600 NZ_NPMB01000003.1 Protein Homology CDS 41694 42038 . - 0 ID=cds-WP_023208244.1;Parent=gene-CCO56_RS06600;Dbxref=GenBank:WP_023208244.1;Name=WP_023208244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=CCO56_RS06600;product=phage holin family protein;protein_id=WP_023208244.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 42165 43112 . - . ID=gene-CCO56_RS06605;Name=CCO56_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06605;old_locus_tag=CCO56_06605 NZ_NPMB01000003.1 Protein Homology CDS 42165 43112 . - 0 ID=cds-WP_023214087.1;Parent=gene-CCO56_RS06605;Dbxref=GenBank:WP_023214087.1;Name=WP_023214087.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=CCO56_RS06605;product=LysR family transcriptional regulator;protein_id=WP_023214087.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 43393 44532 . - . ID=gene-CCO56_RS06610;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CCO56_RS06610;old_locus_tag=CCO56_06610 NZ_NPMB01000003.1 Protein Homology CDS 43393 44532 . - 0 ID=cds-WP_001119009.1;Parent=gene-CCO56_RS06610;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=CCO56_RS06610;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 44618 46534 . - . ID=gene-CCO56_RS06615;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CCO56_RS06615;old_locus_tag=CCO56_06615 NZ_NPMB01000003.1 Protein Homology CDS 44618 46534 . - 0 ID=cds-WP_000516126.1;Parent=gene-CCO56_RS06615;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=CCO56_RS06615;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 46883 47287 . + . ID=gene-CCO56_RS06620;Name=CCO56_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06620;old_locus_tag=CCO56_06620 NZ_NPMB01000003.1 Protein Homology CDS 46883 47287 . + 0 ID=cds-WP_001258082.1;Parent=gene-CCO56_RS06620;Dbxref=GenBank:WP_001258082.1;Name=WP_001258082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=CCO56_RS06620;product=DUF2541 family protein;protein_id=WP_001258082.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 47323 48036 . + . ID=gene-CCO56_RS06625;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=CCO56_RS06625;old_locus_tag=CCO56_06625 NZ_NPMB01000003.1 Protein Homology CDS 47323 48036 . + 0 ID=cds-WP_001103472.1;Parent=gene-CCO56_RS06625;Dbxref=GenBank:WP_001103472.1;Name=WP_001103472.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=CCO56_RS06625;product=acidic protein MsyB;protein_id=WP_001103472.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 48186 48752 . + . ID=gene-CCO56_RS06630;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=CCO56_RS06630;old_locus_tag=CCO56_06630 NZ_NPMB01000003.1 Protein Homology CDS 48186 48752 . + 0 ID=cds-WP_000528525.1;Parent=gene-CCO56_RS06630;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=CCO56_RS06630;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 48809 49399 . - . ID=gene-CCO56_RS06635;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=CCO56_RS06635;old_locus_tag=CCO56_06635 NZ_NPMB01000003.1 Protein Homology CDS 48809 49399 . - 0 ID=cds-WP_000380373.1;Parent=gene-CCO56_RS06635;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=CCO56_RS06635;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 49510 50463 . - . ID=gene-CCO56_RS06640;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO56_RS06640;old_locus_tag=CCO56_06640 NZ_NPMB01000003.1 Protein Homology CDS 49510 50463 . - 0 ID=cds-WP_000130179.1;Parent=gene-CCO56_RS06640;Dbxref=GenBank:WP_000130179.1;Name=WP_000130179.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=CCO56_RS06640;product=transaldolase;protein_id=WP_000130179.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 50732 52162 . + . ID=gene-CCO56_RS06645;Name=CCO56_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06645;old_locus_tag=CCO56_06645 NZ_NPMB01000003.1 Protein Homology CDS 50732 52162 . + 0 ID=cds-WP_001113801.1;Parent=gene-CCO56_RS06645;Dbxref=GenBank:WP_001113801.1;Name=WP_001113801.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=CCO56_RS06645;product=alanine/glycine:cation symporter family protein;protein_id=WP_001113801.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 52241 53014 . + . ID=gene-CCO56_RS06650;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=CCO56_RS06650;old_locus_tag=CCO56_06650 NZ_NPMB01000003.1 Protein Homology CDS 52241 53014 . + 0 ID=cds-WP_080177040.1;Parent=gene-CCO56_RS06650;Dbxref=GenBank:WP_080177040.1;Name=WP_080177040.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=CCO56_RS06650;product=peroxide stress protein YaaA;protein_id=WP_080177040.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 53108 54394 . - . ID=gene-CCO56_RS06655;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CCO56_RS06655;old_locus_tag=CCO56_06655 NZ_NPMB01000003.1 Protein Homology CDS 53108 54394 . - 0 ID=cds-WP_000781100.1;Parent=gene-CCO56_RS06655;Dbxref=GenBank:WP_000781100.1;Name=WP_000781100.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=CCO56_RS06655;product=threonine synthase;protein_id=WP_000781100.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 54398 55327 . - . ID=gene-CCO56_RS06660;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CCO56_RS06660;old_locus_tag=CCO56_06660 NZ_NPMB01000003.1 Protein Homology CDS 54398 55327 . - 0 ID=cds-WP_000241685.1;Parent=gene-CCO56_RS06660;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=CCO56_RS06660;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 55329 57791 . - . ID=gene-CCO56_RS06665;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=CCO56_RS06665;old_locus_tag=CCO56_06665 NZ_NPMB01000003.1 Protein Homology CDS 55329 57791 . - 0 ID=cds-WP_080177041.1;Parent=gene-CCO56_RS06665;Dbxref=GenBank:WP_080177041.1;Name=WP_080177041.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=CCO56_RS06665;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_080177041.1;transl_table=11 NZ_NPMB01000003.1 cmsearch sequence_feature 57817 57937 . - . ID=id-NZ_NPMB01000003.1:57817..57937;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMB01000003.1 RefSeq gene 57873 57938 . - . ID=gene-CCO56_RS06670;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=CCO56_RS06670;old_locus_tag=CCO56_06670 NZ_NPMB01000003.1 Protein Homology CDS 57873 57938 . - 0 ID=cds-WP_001575544.1;Parent=gene-CCO56_RS06670;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=CCO56_RS06670;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 58152 58838 . - . ID=gene-CCO56_RS06675;Name=CCO56_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06675;old_locus_tag=CCO56_06675 NZ_NPMB01000003.1 Protein Homology CDS 58152 58838 . - 0 ID=cds-WP_001266769.1;Parent=gene-CCO56_RS06675;Dbxref=GenBank:WP_001266769.1;Name=WP_001266769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=CCO56_RS06675;product=tRNA/rRNA methyltransferase;protein_id=WP_001266769.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 59238 59378 . - . ID=gene-CCO56_RS06680;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=CCO56_RS06680;old_locus_tag=CCO56_06680 NZ_NPMB01000003.1 Protein Homology CDS 59238 59378 . - 0 ID=cds-WP_001541509.1;Parent=gene-CCO56_RS06680;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=CCO56_RS06680;product=protein YjjY;protein_id=WP_001541509.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 59474 60190 . + . ID=gene-CCO56_RS06685;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO56_RS06685;old_locus_tag=CCO56_06685 NZ_NPMB01000003.1 Protein Homology CDS 59474 60190 . + 0 ID=cds-WP_001194359.1;Parent=gene-CCO56_RS06685;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=CCO56_RS06685;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 60457 60771 . + . ID=gene-CCO56_RS06690;Name=CCO56_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06690;old_locus_tag=CCO56_06690 NZ_NPMB01000003.1 Protein Homology CDS 60457 60771 . + 0 ID=cds-WP_000749515.1;Parent=gene-CCO56_RS06690;Dbxref=GenBank:WP_000749515.1;Name=WP_000749515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=CCO56_RS06690;product=hypothetical protein;protein_id=WP_000749515.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 61156 61827 . + . ID=gene-CCO56_RS06695;Name=CCO56_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06695;old_locus_tag=CCO56_06695 NZ_NPMB01000003.1 Protein Homology CDS 61156 61827 . + 0 ID=cds-WP_000811635.1;Parent=gene-CCO56_RS06695;Dbxref=GenBank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=CCO56_RS06695;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 62166 62711 . + . ID=gene-CCO56_RS06700;Name=CCO56_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06700;old_locus_tag=CCO56_06700 NZ_NPMB01000003.1 Protein Homology CDS 62166 62711 . + 0 ID=cds-WP_001628055.1;Parent=gene-CCO56_RS06700;Dbxref=GenBank:WP_001628055.1;Name=WP_001628055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=CCO56_RS06700;product=fimbrial protein;protein_id=WP_001628055.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 62782 63465 . + . ID=gene-CCO56_RS06705;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO56_RS06705;old_locus_tag=CCO56_06705 NZ_NPMB01000003.1 Protein Homology CDS 62782 63465 . + 0 ID=cds-WP_080177042.1;Parent=gene-CCO56_RS06705;Dbxref=GenBank:WP_080177042.1;Name=WP_080177042.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=CCO56_RS06705;product=fimbrial biogenesis chaperone SthA;protein_id=WP_080177042.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 63511 66048 . + . ID=gene-CCO56_RS06710;Name=CCO56_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06710;old_locus_tag=CCO56_06710 NZ_NPMB01000003.1 Protein Homology CDS 63511 66048 . + 0 ID=cds-WP_080177043.1;Parent=gene-CCO56_RS06710;Dbxref=GenBank:WP_080177043.1;Name=WP_080177043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=CCO56_RS06710;product=fimbrial outer membrane usher protein;protein_id=WP_080177043.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 66066 66623 . + . ID=gene-CCO56_RS06715;Name=CCO56_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06715;old_locus_tag=CCO56_06715 NZ_NPMB01000003.1 Protein Homology CDS 66066 66623 . + 0 ID=cds-WP_001056984.1;Parent=gene-CCO56_RS06715;Dbxref=GenBank:WP_001056984.1;Name=WP_001056984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=CCO56_RS06715;product=fimbrial protein;protein_id=WP_001056984.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 66664 67749 . + . ID=gene-CCO56_RS06720;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=CCO56_RS06720;old_locus_tag=CCO56_06720 NZ_NPMB01000003.1 Protein Homology CDS 66664 67749 . + 0 ID=cds-WP_058344003.1;Parent=gene-CCO56_RS06720;Dbxref=GenBank:WP_058344003.1;Name=WP_058344003.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=CCO56_RS06720;product=fimbrial major subunit SthE;protein_id=WP_058344003.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 67807 69156 . - . ID=gene-CCO56_RS06725;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=CCO56_RS06725;old_locus_tag=CCO56_06725 NZ_NPMB01000003.1 Protein Homology CDS 67807 69156 . - 0 ID=cds-WP_000920387.1;Parent=gene-CCO56_RS06725;Dbxref=GenBank:WP_000920387.1;Name=WP_000920387.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=CCO56_RS06725;product=cell envelope integrity protein CreD;protein_id=WP_000920387.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 69214 70638 . - . ID=gene-CCO56_RS06730;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=CCO56_RS06730;old_locus_tag=CCO56_06730 NZ_NPMB01000003.1 Protein Homology CDS 69214 70638 . - 0 ID=cds-WP_023214091.1;Parent=gene-CCO56_RS06730;Dbxref=GenBank:WP_023214091.1;Name=WP_023214091.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=CCO56_RS06730;product=two-component system sensor histidine kinase CreC;protein_id=WP_023214091.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 70638 71327 . - . ID=gene-CCO56_RS06735;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=CCO56_RS06735;old_locus_tag=CCO56_06735 NZ_NPMB01000003.1 Protein Homology CDS 70638 71327 . - 0 ID=cds-WP_001187050.1;Parent=gene-CCO56_RS06735;Dbxref=GenBank:WP_001187050.1;Name=WP_001187050.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=CCO56_RS06735;product=two-component system response regulator CreB;protein_id=WP_001187050.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 71340 71813 . - . ID=gene-CCO56_RS06740;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=CCO56_RS06740;old_locus_tag=CCO56_06740 NZ_NPMB01000003.1 Protein Homology CDS 71340 71813 . - 0 ID=cds-WP_000875811.1;Parent=gene-CCO56_RS06740;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=CCO56_RS06740;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 72025 72894 . + . ID=gene-CCO56_RS06745;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=CCO56_RS06745;old_locus_tag=CCO56_06745 NZ_NPMB01000003.1 Protein Homology CDS 72025 72894 . + 0 ID=cds-WP_000371685.1;Parent=gene-CCO56_RS06745;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=CCO56_RS06745;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 72891 73538 . - . ID=gene-CCO56_RS06750;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=CCO56_RS06750;old_locus_tag=CCO56_06750 NZ_NPMB01000003.1 Protein Homology CDS 72891 73538 . - 0 ID=cds-WP_000942358.1;Parent=gene-CCO56_RS06750;Dbxref=GenBank:WP_000942358.1;Name=WP_000942358.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=CCO56_RS06750;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942358.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 73587 74102 . + . ID=gene-CCO56_RS06755;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=CCO56_RS06755;old_locus_tag=CCO56_06755 NZ_NPMB01000003.1 Protein Homology CDS 73587 74102 . + 0 ID=cds-WP_000554310.1;Parent=gene-CCO56_RS06755;Dbxref=GenBank:WP_000554310.1;Name=WP_000554310.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=CCO56_RS06755;product=inosine/xanthosine triphosphatase;protein_id=WP_000554310.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 74204 74530 . - . ID=gene-CCO56_RS06760;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=CCO56_RS06760;old_locus_tag=CCO56_06760 NZ_NPMB01000003.1 Protein Homology CDS 74204 74530 . - 0 ID=cds-WP_000192005.1;Parent=gene-CCO56_RS06760;Dbxref=GenBank:WP_000192005.1;Name=WP_000192005.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=CCO56_RS06760;product=trp operon repressor;protein_id=WP_000192005.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 74588 76525 . - . ID=gene-CCO56_RS06765;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=CCO56_RS06765;old_locus_tag=CCO56_06765 NZ_NPMB01000003.1 Protein Homology CDS 74588 76525 . - 0 ID=cds-WP_000373272.1;Parent=gene-CCO56_RS06765;Dbxref=GenBank:WP_000373272.1;Name=WP_000373272.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=CCO56_RS06765;product=murein transglycosylase;protein_id=WP_000373272.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 76734 78401 . + . ID=gene-CCO56_RS06775;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=CCO56_RS06775;old_locus_tag=CCO56_06775 NZ_NPMB01000003.1 Protein Homology CDS 76734 78401 . + 0 ID=cds-WP_000046773.1;Parent=gene-CCO56_RS06775;Dbxref=GenBank:WP_000046773.1;Name=WP_000046773.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=CCO56_RS06775;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046773.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 78519 79751 . - . ID=gene-CCO56_RS06780;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=CCO56_RS06780;old_locus_tag=CCO56_06780 NZ_NPMB01000003.1 Protein Homology CDS 78519 79751 . - 0 ID=cds-WP_001532645.1;Parent=gene-CCO56_RS06780;Dbxref=GenBank:WP_001532645.1;Name=WP_001532645.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=CCO56_RS06780;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_001532645.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 79902 81284 . - . ID=gene-CCO56_RS06785;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CCO56_RS06785;old_locus_tag=CCO56_06785 NZ_NPMB01000003.1 Protein Homology CDS 79902 81284 . - 0 ID=cds-WP_001029710.1;Parent=gene-CCO56_RS06785;Dbxref=GenBank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=CCO56_RS06785;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 81368 82336 . - . ID=gene-CCO56_RS06790;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO56_RS06790;old_locus_tag=CCO56_06790 NZ_NPMB01000003.1 Protein Homology CDS 81368 82336 . - 0 ID=cds-WP_001132983.1;Parent=gene-CCO56_RS06790;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=CCO56_RS06790;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 82453 83097 . + . ID=gene-CCO56_RS06800;Name=CCO56_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06800;old_locus_tag=CCO56_06800 NZ_NPMB01000003.1 Protein Homology CDS 82453 83097 . + 0 ID=cds-WP_000090067.1;Parent=gene-CCO56_RS06800;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=CCO56_RS06800;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 83131 84147 . + . ID=gene-CCO56_RS06805;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=CCO56_RS06805;old_locus_tag=CCO56_06805 NZ_NPMB01000003.1 Protein Homology CDS 83131 84147 . + 0 ID=cds-WP_001647421.1;Parent=gene-CCO56_RS06805;Dbxref=GenBank:WP_001647421.1;Name=WP_001647421.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=CCO56_RS06805;product=lipoate--protein ligase LplA;protein_id=WP_001647421.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 84458 85147 . + . ID=gene-CCO56_RS06815;Name=CCO56_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06815;old_locus_tag=CCO56_06815 NZ_NPMB01000003.1 Protein Homology CDS 84458 85147 . + 0 ID=cds-WP_080177044.1;Parent=gene-CCO56_RS06815;Dbxref=GenBank:WP_080177044.1;Name=WP_080177044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463431.1;locus_tag=CCO56_RS06815;product=DUF1120 domain-containing protein;protein_id=WP_080177044.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 85195 85884 . + . ID=gene-CCO56_RS06820;Name=CCO56_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06820;old_locus_tag=CCO56_06820 NZ_NPMB01000003.1 Protein Homology CDS 85195 85884 . + 0 ID=cds-WP_000722272.1;Parent=gene-CCO56_RS06820;Dbxref=GenBank:WP_000722272.1;Name=WP_000722272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463430.1;locus_tag=CCO56_RS06820;product=DUF1120 domain-containing protein;protein_id=WP_000722272.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 85962 86669 . + . ID=gene-CCO56_RS06825;Name=stjC;gbkey=Gene;gene=stjC;gene_biotype=protein_coding;locus_tag=CCO56_RS06825;old_locus_tag=CCO56_06825 NZ_NPMB01000003.1 Protein Homology CDS 85962 86669 . + 0 ID=cds-WP_001112028.1;Parent=gene-CCO56_RS06825;Dbxref=GenBank:WP_001112028.1;Name=WP_001112028.1;gbkey=CDS;gene=stjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463429.1;locus_tag=CCO56_RS06825;product=fimbrial biogenesis chaperone StjC;protein_id=WP_001112028.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 86683 89091 . + . ID=gene-CCO56_RS06830;Name=CCO56_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06830;old_locus_tag=CCO56_06830 NZ_NPMB01000003.1 Protein Homology CDS 86683 89091 . + 0 ID=cds-WP_080177045.1;Parent=gene-CCO56_RS06830;Dbxref=GenBank:WP_080177045.1;Name=WP_080177045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463428.1;locus_tag=CCO56_RS06830;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_080177045.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 89088 89660 . + . ID=gene-CCO56_RS06835;Name=CCO56_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06835;old_locus_tag=CCO56_06835 NZ_NPMB01000003.1 Protein Homology CDS 89088 89660 . + 0 ID=cds-WP_023212762.1;Parent=gene-CCO56_RS06835;Dbxref=GenBank:WP_023212762.1;Name=WP_023212762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463427.1;locus_tag=CCO56_RS06835;product=hypothetical protein;protein_id=WP_023212762.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 89698 90417 . - . ID=gene-CCO56_RS06840;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CCO56_RS06840;old_locus_tag=CCO56_06840 NZ_NPMB01000003.1 Protein Homology CDS 89698 90417 . - 0 ID=cds-WP_000224864.1;Parent=gene-CCO56_RS06840;Dbxref=GenBank:WP_000224864.1;Name=WP_000224864.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=CCO56_RS06840;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 90627 91850 . - . ID=gene-CCO56_RS06845;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CCO56_RS06845;old_locus_tag=CCO56_06845 NZ_NPMB01000003.1 Protein Homology CDS 90627 91850 . - 0 ID=cds-WP_000816454.1;Parent=gene-CCO56_RS06845;Dbxref=GenBank:WP_000816454.1;Name=WP_000816454.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=CCO56_RS06845;product=phosphopentomutase;protein_id=WP_000816454.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 91902 93224 . - . ID=gene-CCO56_RS06850;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=CCO56_RS06850;old_locus_tag=CCO56_06850 NZ_NPMB01000003.1 Protein Homology CDS 91902 93224 . - 0 ID=cds-WP_000477840.1;Parent=gene-CCO56_RS06850;Dbxref=GenBank:WP_000477840.1;Name=WP_000477840.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=CCO56_RS06850;product=thymidine phosphorylase;protein_id=WP_000477840.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 93348 94127 . - . ID=gene-CCO56_RS06855;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CCO56_RS06855;old_locus_tag=CCO56_06855 NZ_NPMB01000003.1 Protein Homology CDS 93348 94127 . - 0 ID=cds-WP_001519713.1;Parent=gene-CCO56_RS06855;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=CCO56_RS06855;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 94387 95937 . + . ID=gene-CCO56_RS06860;Name=CCO56_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06860;old_locus_tag=CCO56_06860 NZ_NPMB01000003.1 Protein Homology CDS 94387 95937 . + 0 ID=cds-WP_001111686.1;Parent=gene-CCO56_RS06860;Dbxref=GenBank:WP_001111686.1;Name=WP_001111686.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=CCO56_RS06860;product=YjjI family glycine radical enzyme;protein_id=WP_001111686.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 95909 96772 . + . ID=gene-CCO56_RS06865;Name=CCO56_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06865;old_locus_tag=CCO56_06865 NZ_NPMB01000003.1 Protein Homology CDS 95909 96772 . + 0 ID=cds-WP_080177046.1;Parent=gene-CCO56_RS06865;Dbxref=GenBank:WP_080177046.1;Name=WP_080177046.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=CCO56_RS06865;product=YjjW family glycine radical enzyme activase;protein_id=WP_080177046.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 96805 97578 . - . ID=gene-CCO56_RS06870;Name=CCO56_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06870;old_locus_tag=CCO56_06870 NZ_NPMB01000003.1 Protein Homology CDS 96805 97578 . - 0 ID=cds-WP_023212765.1;Parent=gene-CCO56_RS06870;Dbxref=GenBank:WP_023212765.1;Name=WP_023212765.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=CCO56_RS06870;product=metal-dependent hydrolase;protein_id=WP_023212765.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 97575 98648 . - . ID=gene-CCO56_RS06875;Name=CCO56_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06875;old_locus_tag=CCO56_06875 NZ_NPMB01000003.1 Protein Homology CDS 97575 98648 . - 0 ID=cds-WP_000531540.1;Parent=gene-CCO56_RS06875;Dbxref=GenBank:WP_000531540.1;Name=WP_000531540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=CCO56_RS06875;product=patatin-like phospholipase family protein;protein_id=WP_000531540.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 98772 98933 . - . ID=gene-CCO56_RS06880;Name=CCO56_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06880;old_locus_tag=CCO56_06880 NZ_NPMB01000003.1 Protein Homology CDS 98772 98933 . - 0 ID=cds-WP_000490276.1;Parent=gene-CCO56_RS06880;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=CCO56_RS06880;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 99062 99679 . - . ID=gene-CCO56_RS06885;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO56_RS06885;old_locus_tag=CCO56_06885 NZ_NPMB01000003.1 Protein Homology CDS 99062 99679 . - 0 ID=cds-WP_000178963.1;Parent=gene-CCO56_RS06885;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=CCO56_RS06885;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 100081 101670 . - . ID=gene-CCO56_RS06890;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=CCO56_RS06890;old_locus_tag=CCO56_06890 NZ_NPMB01000003.1 Protein Homology CDS 100081 101670 . - 0 ID=cds-WP_000175965.1;Parent=gene-CCO56_RS06890;Dbxref=GenBank:WP_000175965.1;Name=WP_000175965.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=CCO56_RS06890;product=peptide chain release factor 3;protein_id=WP_000175965.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 101762 102439 . - . ID=gene-CCO56_RS06895;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=CCO56_RS06895;old_locus_tag=CCO56_06895 NZ_NPMB01000003.1 Protein Homology CDS 101762 102439 . - 0 ID=cds-WP_000870686.1;Parent=gene-CCO56_RS06895;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=CCO56_RS06895;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 102461 102907 . - . ID=gene-CCO56_RS06900;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CCO56_RS06900;old_locus_tag=CCO56_06900 NZ_NPMB01000003.1 Protein Homology CDS 102461 102907 . - 0 ID=cds-WP_001092434.1;Parent=gene-CCO56_RS06900;Dbxref=GenBank:WP_001092434.1;Name=WP_001092434.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=CCO56_RS06900;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092434.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 102852 103289 . - . ID=gene-CCO56_RS06905;Name=CCO56_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06905;old_locus_tag=CCO56_06905 NZ_NPMB01000003.1 Protein Homology CDS 102852 103289 . - 0 ID=cds-WP_000204003.1;Parent=gene-CCO56_RS06905;Dbxref=GenBank:WP_000204003.1;Name=WP_000204003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=CCO56_RS06905;product=DNA polymerase III subunit psi;protein_id=WP_000204003.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 103392 104420 . + . ID=gene-CCO56_RS06910;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=CCO56_RS06910;old_locus_tag=CCO56_06910 NZ_NPMB01000003.1 Protein Homology CDS 103392 104420 . + 0 ID=cds-WP_001272266.1;Parent=gene-CCO56_RS06910;Dbxref=GenBank:WP_001272266.1;Name=WP_001272266.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=CCO56_RS06910;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272266.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 104611 104697 . + . ID=gene-CCO56_RS06915;Name=CCO56_RS06915;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS06915;old_locus_tag=CCO56_06915 NZ_NPMB01000003.1 tRNAscan-SE tRNA 104611 104697 . + . ID=rna-CCO56_RS06915;Parent=gene-CCO56_RS06915;anticodon=(pos:104645..104647);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS06915;product=tRNA-Leu NZ_NPMB01000003.1 tRNAscan-SE exon 104611 104697 . + . ID=exon-CCO56_RS06915-1;Parent=rna-CCO56_RS06915;anticodon=(pos:104645..104647);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS06915;product=tRNA-Leu NZ_NPMB01000003.1 RefSeq gene 104725 104811 . + . ID=gene-CCO56_RS06920;Name=CCO56_RS06920;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS06920;old_locus_tag=CCO56_06920 NZ_NPMB01000003.1 tRNAscan-SE tRNA 104725 104811 . + . ID=rna-CCO56_RS06920;Parent=gene-CCO56_RS06920;anticodon=(pos:104759..104761);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS06920;product=tRNA-Leu NZ_NPMB01000003.1 tRNAscan-SE exon 104725 104811 . + . ID=exon-CCO56_RS06920-1;Parent=rna-CCO56_RS06920;anticodon=(pos:104759..104761);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS06920;product=tRNA-Leu NZ_NPMB01000003.1 RefSeq gene 104843 104929 . + . ID=gene-CCO56_RS06925;Name=CCO56_RS06925;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS06925;old_locus_tag=CCO56_06925 NZ_NPMB01000003.1 tRNAscan-SE tRNA 104843 104929 . + . ID=rna-CCO56_RS06925;Parent=gene-CCO56_RS06925;anticodon=(pos:104877..104879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS06925;product=tRNA-Leu NZ_NPMB01000003.1 tRNAscan-SE exon 104843 104929 . + . ID=exon-CCO56_RS06925-1;Parent=rna-CCO56_RS06925;anticodon=(pos:104877..104879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS06925;product=tRNA-Leu NZ_NPMB01000003.1 RefSeq gene 104961 105197 . - . ID=gene-CCO56_RS06930;Name=CCO56_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06930;old_locus_tag=CCO56_06930 NZ_NPMB01000003.1 Protein Homology CDS 104961 105197 . - 0 ID=cds-WP_000941879.1;Parent=gene-CCO56_RS06930;Dbxref=GenBank:WP_000941879.1;Name=WP_000941879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=CCO56_RS06930;product=DUF1435 domain-containing protein;protein_id=WP_000941879.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 105448 106512 . + . ID=gene-CCO56_RS06935;Name=CCO56_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06935;old_locus_tag=CCO56_06935 NZ_NPMB01000003.1 Protein Homology CDS 105448 106512 . + 0 ID=cds-WP_080177047.1;Parent=gene-CCO56_RS06935;Dbxref=GenBank:WP_080177047.1;Name=WP_080177047.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=CCO56_RS06935;product=GGDEF domain-containing protein;protein_id=WP_080177047.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 106633 107421 . + . ID=gene-CCO56_RS06940;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=CCO56_RS06940;old_locus_tag=CCO56_06940 NZ_NPMB01000003.1 Protein Homology CDS 106633 107421 . + 0 ID=cds-WP_000331528.1;Parent=gene-CCO56_RS06940;Dbxref=GenBank:WP_000331528.1;Name=WP_000331528.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=CCO56_RS06940;product=siderophore-iron reductase FhuF;protein_id=WP_000331528.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 107572 108030 . + . ID=gene-CCO56_RS06945;Name=CCO56_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06945;old_locus_tag=CCO56_06945 NZ_NPMB01000003.1 Protein Homology CDS 107572 108030 . + 0 ID=cds-WP_000058269.1;Parent=gene-CCO56_RS06945;Dbxref=GenBank:WP_000058269.1;Name=WP_000058269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=CCO56_RS06945;product=YbaK/EbsC family protein;protein_id=WP_000058269.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 108081 108755 . - . ID=gene-CCO56_RS06950;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=CCO56_RS06950;old_locus_tag=CCO56_06950 NZ_NPMB01000003.1 Protein Homology CDS 108081 108755 . - 0 ID=cds-WP_000431546.1;Parent=gene-CCO56_RS06950;Dbxref=GenBank:WP_000431546.1;Name=WP_000431546.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=CCO56_RS06950;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 108716 109441 . - . ID=gene-CCO56_RS06955;Name=CCO56_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06955;old_locus_tag=CCO56_06955 NZ_NPMB01000003.1 Protein Homology CDS 108716 109441 . - 0 ID=cds-WP_000936659.1;Parent=gene-CCO56_RS06955;Dbxref=GenBank:WP_000936659.1;Name=WP_000936659.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=CCO56_RS06955;product=response regulator transcription factor;protein_id=WP_000936659.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 110153 110929 . + . ID=gene-CCO56_RS06960;Name=CCO56_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06960;old_locus_tag=CCO56_06960 NZ_NPMB01000003.1 Protein Homology CDS 110153 110929 . + 0 ID=cds-WP_001674846.1;Parent=gene-CCO56_RS06960;Dbxref=GenBank:WP_001674846.1;Name=WP_001674846.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=CCO56_RS06960;product=threonine/serine ThrE exporter family protein;protein_id=WP_001674846.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 110920 111393 . + . ID=gene-CCO56_RS06965;Name=CCO56_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06965;old_locus_tag=CCO56_06965 NZ_NPMB01000003.1 Protein Homology CDS 110920 111393 . + 0 ID=cds-WP_000511329.1;Parent=gene-CCO56_RS06965;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=CCO56_RS06965;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 111486 112025 . + . ID=gene-CCO56_RS06970;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=CCO56_RS06970;old_locus_tag=CCO56_06970 NZ_NPMB01000003.1 Protein Homology CDS 111486 112025 . + 0 ID=cds-WP_000098573.1;Parent=gene-CCO56_RS06970;Dbxref=GenBank:WP_000098573.1;Name=WP_000098573.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=CCO56_RS06970;product=primosomal protein DnaT;protein_id=WP_000098573.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 112028 112765 . + . ID=gene-CCO56_RS06975;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=CCO56_RS06975;old_locus_tag=CCO56_06975 NZ_NPMB01000003.1 Protein Homology CDS 112028 112765 . + 0 ID=cds-WP_000799924.1;Parent=gene-CCO56_RS06975;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=CCO56_RS06975;product=DNA replication protein DnaC;protein_id=WP_000799924.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 112823 113314 . + . ID=gene-CCO56_RS06980;Name=CCO56_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06980;old_locus_tag=CCO56_06980 NZ_NPMB01000003.1 Protein Homology CDS 112823 113314 . + 0 ID=cds-WP_080177048.1;Parent=gene-CCO56_RS06980;Dbxref=GenBank:WP_080177048.1;Name=WP_080177048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=CCO56_RS06980;product=DUF2501 domain-containing protein;protein_id=WP_080177048.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 113597 115888 . + . ID=gene-CCO56_RS06985;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=CCO56_RS06985;old_locus_tag=CCO56_06985 NZ_NPMB01000003.1 Protein Homology CDS 113597 115888 . + 0 ID=cds-WP_080177049.1;Parent=gene-CCO56_RS06985;Dbxref=GenBank:WP_080177049.1;Name=WP_080177049.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=CCO56_RS06985;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_080177049.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 116022 117032 . - . ID=gene-CCO56_RS06990;Name=CCO56_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06990;old_locus_tag=CCO56_06990 NZ_NPMB01000003.1 Protein Homology CDS 116022 117032 . - 0 ID=cds-WP_176207675.1;Parent=gene-CCO56_RS06990;Dbxref=GenBank:WP_176207675.1;Name=WP_176207675.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=CCO56_RS06990;product=SIS domain-containing protein;protein_id=WP_176207675.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 117050 118111 . - . ID=gene-CCO56_RS06995;Name=CCO56_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS06995;old_locus_tag=CCO56_06995 NZ_NPMB01000003.1 Protein Homology CDS 117050 118111 . - 0 ID=cds-WP_080177051.1;Parent=gene-CCO56_RS06995;Dbxref=GenBank:WP_080177051.1;Name=WP_080177051.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=CCO56_RS06995;product=SIS domain-containing protein;protein_id=WP_080177051.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 118124 118972 . - . ID=gene-CCO56_RS07000;Name=CCO56_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07000;old_locus_tag=CCO56_07000 NZ_NPMB01000003.1 Protein Homology CDS 118124 118972 . - 0 ID=cds-WP_000178065.1;Parent=gene-CCO56_RS07000;Dbxref=GenBank:WP_000178065.1;Name=WP_000178065.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=CCO56_RS07000;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178065.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 118950 119729 . - . ID=gene-CCO56_RS07005;Name=CCO56_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07005;old_locus_tag=CCO56_07005 NZ_NPMB01000003.1 Protein Homology CDS 118950 119729 . - 0 ID=cds-WP_000228866.1;Parent=gene-CCO56_RS07005;Dbxref=GenBank:WP_000228866.1;Name=WP_000228866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=CCO56_RS07005;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228866.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 119755 120216 . - . ID=gene-CCO56_RS07010;Name=CCO56_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07010;old_locus_tag=CCO56_07010 NZ_NPMB01000003.1 Protein Homology CDS 119755 120216 . - 0 ID=cds-WP_000634729.1;Parent=gene-CCO56_RS07010;Dbxref=GenBank:WP_000634729.1;Name=WP_000634729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=CCO56_RS07010;product=PTS sugar transporter subunit IIB;protein_id=WP_000634729.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 120231 120653 . - . ID=gene-CCO56_RS07015;Name=CCO56_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07015;old_locus_tag=CCO56_07015 NZ_NPMB01000003.1 Protein Homology CDS 120231 120653 . - 0 ID=cds-WP_000820693.1;Parent=gene-CCO56_RS07015;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=CCO56_RS07015;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 120755 123520 . - . ID=gene-CCO56_RS07020;Name=CCO56_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07020;old_locus_tag=CCO56_07020 NZ_NPMB01000003.1 Protein Homology CDS 120755 123520 . - 0 ID=cds-WP_079826868.1;Parent=gene-CCO56_RS07020;Dbxref=GenBank:WP_079826868.1;Name=WP_079826868.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=CCO56_RS07020;product=sigma 54-interacting transcriptional regulator;protein_id=WP_079826868.1;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 123657 123731 . + . ID=gene-CCO56_RS23720;Name=CCO56_RS23720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23720;partial=true;pseudo=true;start_range=.,123657 NZ_NPMB01000003.1 Protein Homology CDS 123657 123731 . + 0 ID=cds-CCO56_RS23720;Parent=gene-CCO56_RS23720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134222.1;locus_tag=CCO56_RS23720;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,123657;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 123843 125504 . - . ID=gene-CCO56_RS07025;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=CCO56_RS07025;old_locus_tag=CCO56_07025 NZ_NPMB01000003.1 Protein Homology CDS 123843 125504 . - 0 ID=cds-WP_000919521.1;Parent=gene-CCO56_RS07025;Dbxref=GenBank:WP_000919521.1;Name=WP_000919521.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=CCO56_RS07025;product=methyl-accepting chemotaxis protein;protein_id=WP_000919521.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 125871 128021 . + . ID=gene-CCO56_RS07030;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=CCO56_RS07030;old_locus_tag=CCO56_07030 NZ_NPMB01000003.1 Protein Homology CDS 125871 128021 . + 0 ID=cds-WP_000379929.1;Parent=gene-CCO56_RS07030;Dbxref=GenBank:WP_000379929.1;Name=WP_000379929.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=CCO56_RS07030;product=pyruvate/proton symporter BtsT;protein_id=WP_000379929.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 128116 128319 . + . ID=gene-CCO56_RS07035;Name=CCO56_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07035;old_locus_tag=CCO56_07035 NZ_NPMB01000003.1 Protein Homology CDS 128116 128319 . + 0 ID=cds-WP_000460616.1;Parent=gene-CCO56_RS07035;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=CCO56_RS07035;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 128330 129286 . + . ID=gene-CCO56_RS07040;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=CCO56_RS07040;old_locus_tag=CCO56_07040 NZ_NPMB01000003.1 Protein Homology CDS 128330 129286 . + 0 ID=cds-WP_000187840.1;Parent=gene-CCO56_RS07040;Dbxref=GenBank:WP_000187840.1;Name=WP_000187840.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=CCO56_RS07040;product=GTPase;protein_id=WP_000187840.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 129323 130138 . + . ID=gene-CCO56_RS07045;Name=CCO56_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07045;old_locus_tag=CCO56_07045 NZ_NPMB01000003.1 Protein Homology CDS 129323 130138 . + 0 ID=cds-WP_001647390.1;Parent=gene-CCO56_RS07045;Dbxref=GenBank:WP_001647390.1;Name=WP_001647390.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001128428.1;locus_tag=CCO56_RS07045;product=AraC family transcriptional regulator;protein_id=WP_001647390.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 130186 130827 . + . ID=gene-CCO56_RS07050;Name=CCO56_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07050;old_locus_tag=CCO56_07050 NZ_NPMB01000003.1 Protein Homology CDS 130186 130827 . + 0 ID=cds-WP_080177052.1;Parent=gene-CCO56_RS07050;Dbxref=GenBank:WP_080177052.1;Name=WP_080177052.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727645.1;locus_tag=CCO56_RS07050;product=LysE family translocator;protein_id=WP_080177052.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 131122 131454 . + . ID=gene-CCO56_RS07055;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=CCO56_RS07055;old_locus_tag=CCO56_07055 NZ_NPMB01000003.1 Protein Homology CDS 131122 131454 . + 0 ID=cds-WP_001647389.1;Parent=gene-CCO56_RS07055;Dbxref=GenBank:WP_001647389.1;Name=WP_001647389.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463382.1;locus_tag=CCO56_RS07055;product=endoribonuclease SymE;protein_id=WP_001647389.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 131528 132229 . + . ID=gene-CCO56_RS07060;Name=CCO56_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07060;old_locus_tag=CCO56_07060 NZ_NPMB01000003.1 Protein Homology CDS 131528 132229 . + 0 ID=cds-WP_023197696.1;Parent=gene-CCO56_RS07060;Dbxref=GenBank:WP_023197696.1;Name=WP_023197696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463381.1;locus_tag=CCO56_RS07060;product=hypothetical protein;protein_id=WP_023197696.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 132304 132468 . - . ID=gene-CCO56_RS07065;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=CCO56_RS07065;old_locus_tag=CCO56_07065 NZ_NPMB01000003.1 Protein Homology CDS 132304 132468 . - 0 ID=cds-WP_000397917.1;Parent=gene-CCO56_RS07065;Dbxref=GenBank:WP_000397917.1;Name=WP_000397917.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=CCO56_RS07065;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397917.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 132435 132578 . + . ID=gene-CCO56_RS07070;Name=CCO56_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07070;old_locus_tag=CCO56_07070 NZ_NPMB01000003.1 Protein Homology CDS 132435 132578 . + 0 ID=cds-WP_001647387.1;Parent=gene-CCO56_RS07070;Dbxref=GenBank:WP_001647387.1;Name=WP_001647387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=CCO56_RS07070;product=hypothetical protein;protein_id=WP_001647387.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 132674 134044 . - . ID=gene-CCO56_RS07075;Name=CCO56_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07075;old_locus_tag=CCO56_07075 NZ_NPMB01000003.1 Protein Homology CDS 132674 134044 . - 0 ID=cds-WP_080177053.1;Parent=gene-CCO56_RS07075;Dbxref=GenBank:WP_080177053.1;Name=WP_080177053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=CCO56_RS07075;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_080177053.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 134225 135178 . - . ID=gene-CCO56_RS07080;Name=CCO56_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07080;old_locus_tag=CCO56_07080 NZ_NPMB01000003.1 Protein Homology CDS 134225 135178 . - 0 ID=cds-WP_080177054.1;Parent=gene-CCO56_RS07080;Dbxref=GenBank:WP_080177054.1;Name=WP_080177054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=CCO56_RS07080;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_080177054.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 135657 136898 . + . ID=gene-CCO56_RS07085;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=CCO56_RS07085;old_locus_tag=CCO56_07085 NZ_NPMB01000003.1 Protein Homology CDS 135657 136898 . + 0 ID=cds-WP_001188918.1;Parent=gene-CCO56_RS07085;Dbxref=GenBank:WP_001188918.1;Name=WP_001188918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=CCO56_RS07085;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 136985 138256 . + . ID=gene-CCO56_RS07090;Name=CCO56_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07090;old_locus_tag=CCO56_07090 NZ_NPMB01000003.1 Protein Homology CDS 136985 138256 . + 0 ID=cds-WP_023233296.1;Parent=gene-CCO56_RS07090;Dbxref=GenBank:WP_023233296.1;Name=WP_023233296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=CCO56_RS07090;product=DUF445 domain-containing protein;protein_id=WP_023233296.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 138476 139660 . + . ID=gene-CCO56_RS07095;Name=CCO56_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07095;old_locus_tag=CCO56_07095 NZ_NPMB01000003.1 Protein Homology CDS 138476 139660 . + 0 ID=cds-WP_000233266.1;Parent=gene-CCO56_RS07095;Dbxref=GenBank:WP_000233266.1;Name=WP_000233266.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=CCO56_RS07095;product=MFS transporter;protein_id=WP_000233266.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 140532 141203 . + . ID=gene-CCO56_RS07100;Name=CCO56_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07100;old_locus_tag=CCO56_07100 NZ_NPMB01000003.1 Protein Homology CDS 140532 141203 . + 0 ID=cds-WP_000068750.1;Parent=gene-CCO56_RS07100;Dbxref=GenBank:WP_000068750.1;Name=WP_000068750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=CCO56_RS07100;product=nucleoside recognition domain-containing protein;protein_id=WP_000068750.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 141200 141661 . + . ID=gene-CCO56_RS07105;Name=CCO56_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07105;old_locus_tag=CCO56_07105 NZ_NPMB01000003.1 Protein Homology CDS 141200 141661 . + 0 ID=cds-WP_000211979.1;Parent=gene-CCO56_RS07105;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=CCO56_RS07105;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 141674 142846 . + . ID=gene-CCO56_RS07110;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=CCO56_RS07110;old_locus_tag=CCO56_07110 NZ_NPMB01000003.1 Protein Homology CDS 141674 142846 . + 0 ID=cds-WP_001113064.1;Parent=gene-CCO56_RS07110;Dbxref=GenBank:WP_001113064.1;Name=WP_001113064.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=CCO56_RS07110;product=beta-aspartyl-peptidase;protein_id=WP_001113064.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 142965 143873 . + . ID=gene-CCO56_RS07115;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=CCO56_RS07115;old_locus_tag=CCO56_07115 NZ_NPMB01000003.1 Protein Homology CDS 142965 143873 . + 0 ID=cds-WP_000383509.1;Parent=gene-CCO56_RS07115;Dbxref=GenBank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=CCO56_RS07115;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 143879 144613 . - . ID=gene-CCO56_RS07120;Name=CCO56_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07120;old_locus_tag=CCO56_07120 NZ_NPMB01000003.1 Protein Homology CDS 143879 144613 . - 0 ID=cds-WP_000683247.1;Parent=gene-CCO56_RS07120;Dbxref=GenBank:WP_000683247.1;Name=WP_000683247.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=CCO56_RS07120;product=aspartate/glutamate racemase family protein;protein_id=WP_000683247.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 144852 145382 . - . ID=gene-CCO56_RS07130;Name=CCO56_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07130;old_locus_tag=CCO56_07130 NZ_NPMB01000003.1 Protein Homology CDS 144852 145382 . - 0 ID=cds-WP_000907671.1;Parent=gene-CCO56_RS07130;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=CCO56_RS07130;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 146100 147113 . + . ID=gene-CCO56_RS07135;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO56_RS07135;old_locus_tag=CCO56_07135 NZ_NPMB01000003.1 Protein Homology CDS 146100 147113 . + 0 ID=cds-WP_001094612.1;Parent=gene-CCO56_RS07135;Dbxref=GenBank:WP_001094612.1;Name=WP_001094612.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=CCO56_RS07135;product=tryptophan--tRNA ligase;protein_id=WP_001094612.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 147114 147887 . - . ID=gene-CCO56_RS07140;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=CCO56_RS07140;old_locus_tag=CCO56_07140 NZ_NPMB01000003.1 Protein Homology CDS 147114 147887 . - 0 ID=cds-WP_000841654.1;Parent=gene-CCO56_RS07140;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=CCO56_RS07140;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 148237 148902 . + . ID=gene-CCO56_RS07150;Name=CCO56_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07150;old_locus_tag=CCO56_07150 NZ_NPMB01000003.1 Protein Homology CDS 148237 148902 . + 0 ID=cds-WP_080177055.1;Parent=gene-CCO56_RS07150;Dbxref=GenBank:WP_080177055.1;Name=WP_080177055.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588696.1;locus_tag=CCO56_RS07150;product=dienelactone hydrolase family protein;protein_id=WP_080177055.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 148919 149380 . - . ID=gene-CCO56_RS07155;Name=CCO56_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07155;old_locus_tag=CCO56_07155 NZ_NPMB01000003.1 Protein Homology CDS 148919 149380 . - 0 ID=cds-WP_001654330.1;Parent=gene-CCO56_RS07155;Dbxref=GenBank:WP_001654330.1;Name=WP_001654330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=CCO56_RS07155;product=DUF302 domain-containing protein;protein_id=WP_001654330.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 149585 150496 . - . ID=gene-CCO56_RS07160;Name=CCO56_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07160;old_locus_tag=CCO56_07160 NZ_NPMB01000003.1 Protein Homology CDS 149585 150496 . - 0 ID=cds-WP_001647363.1;Parent=gene-CCO56_RS07160;Dbxref=GenBank:WP_001647363.1;Name=WP_001647363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=CCO56_RS07160;product=STM4504/CBY_0614 family protein;protein_id=WP_001647363.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 150848 151456 . - . ID=gene-CCO56_RS07165;Name=CCO56_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07165;old_locus_tag=CCO56_07165 NZ_NPMB01000003.1 Protein Homology CDS 150848 151456 . - 0 ID=cds-WP_000864858.1;Parent=gene-CCO56_RS07165;Dbxref=GenBank:WP_000864858.1;Name=WP_000864858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=CCO56_RS07165;product=DUF1062 domain-containing protein;protein_id=WP_000864858.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 151944 152201 . + . ID=gene-CCO56_RS07175;Name=CCO56_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07175;old_locus_tag=CCO56_07175 NZ_NPMB01000003.1 Protein Homology CDS 151944 152201 . + 0 ID=cds-WP_001054380.1;Parent=gene-CCO56_RS07175;Dbxref=GenBank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=CCO56_RS07175;product=YjhX family toxin;protein_id=WP_001054380.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 152206 153837 . + . ID=gene-CCO56_RS07180;Name=CCO56_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07180;old_locus_tag=CCO56_07180 NZ_NPMB01000003.1 Protein Homology CDS 152206 153837 . + 0 ID=cds-WP_077909915.1;Parent=gene-CCO56_RS07180;Dbxref=GenBank:WP_077909915.1;Name=WP_077909915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=CCO56_RS07180;product=class I SAM-dependent methyltransferase;protein_id=WP_077909915.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 154397 155113 . + . ID=gene-CCO56_RS07190;Name=CCO56_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07190;old_locus_tag=CCO56_07190 NZ_NPMB01000003.1 Protein Homology CDS 154397 155113 . + 0 ID=cds-WP_000532939.1;Parent=gene-CCO56_RS07190;Dbxref=GenBank:WP_000532939.1;Name=WP_000532939.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=CCO56_RS07190;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532939.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 155594 156469 . - . ID=gene-CCO56_RS07195;Name=CCO56_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07195;old_locus_tag=CCO56_07195 NZ_NPMB01000003.1 Protein Homology CDS 155594 156469 . - 0 ID=cds-WP_080177079.1;Parent=gene-CCO56_RS07195;Dbxref=GenBank:WP_080177079.1;Name=WP_080177079.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=CCO56_RS07195;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_080177079.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 157083 160232 . - . ID=gene-CCO56_RS07200;Name=CCO56_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07200;old_locus_tag=CCO56_07200 NZ_NPMB01000003.1 Protein Homology CDS 157083 160232 . - 0 ID=cds-WP_080177078.1;Parent=gene-CCO56_RS07200;Dbxref=GenBank:WP_080177078.1;Name=WP_080177078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763887.1;locus_tag=CCO56_RS07200;product=helicase-related protein;protein_id=WP_080177078.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 160222 162018 . - . ID=gene-CCO56_RS07205;Name=CCO56_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07205;old_locus_tag=CCO56_07205 NZ_NPMB01000003.1 Protein Homology CDS 160222 162018 . - 0 ID=cds-WP_069721128.1;Parent=gene-CCO56_RS07205;Dbxref=GenBank:WP_069721128.1;Name=WP_069721128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933952.1;locus_tag=CCO56_RS07205;product=phospholipase D family protein;protein_id=WP_069721128.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 162012 163241 . - . ID=gene-CCO56_RS07210;Name=CCO56_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07210;old_locus_tag=CCO56_07210 NZ_NPMB01000003.1 Protein Homology CDS 162012 163241 . - 0 ID=cds-WP_024146610.1;Parent=gene-CCO56_RS07210;Dbxref=GenBank:WP_024146610.1;Name=WP_024146610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000252893.1;locus_tag=CCO56_RS07210;product=DUF6361 family protein;protein_id=WP_024146610.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 163422 165152 . - . ID=gene-CCO56_RS07215;Name=CCO56_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07215;old_locus_tag=CCO56_07215 NZ_NPMB01000003.1 Protein Homology CDS 163422 165152 . - 0 ID=cds-WP_000434625.1;Parent=gene-CCO56_RS07215;Dbxref=GenBank:WP_000434625.1;Name=WP_000434625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000434625.1;locus_tag=CCO56_RS07215;product=LeoA/HP0731 family dynamin-like GTPase;protein_id=WP_000434625.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 165124 166827 . - . ID=gene-CCO56_RS07220;Name=CCO56_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07220;old_locus_tag=CCO56_07220 NZ_NPMB01000003.1 Protein Homology CDS 165124 166827 . - 0 ID=cds-WP_167851779.1;Parent=gene-CCO56_RS07220;Dbxref=GenBank:WP_167851779.1;Name=WP_167851779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285945.1;locus_tag=CCO56_RS07220;product=DUF1269 domain-containing protein;protein_id=WP_167851779.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 166830 167657 . - . ID=gene-CCO56_RS07225;Name=CCO56_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07225;old_locus_tag=CCO56_07225 NZ_NPMB01000003.1 GeneMarkS-2+ CDS 166830 167657 . - 0 ID=cds-WP_223617493.1;Parent=gene-CCO56_RS07225;Dbxref=GenBank:WP_223617493.1;Name=WP_223617493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS07225;product=hypothetical protein;protein_id=WP_223617493.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 167833 170724 . + . ID=gene-CCO56_RS07230;Name=CCO56_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07230;old_locus_tag=CCO56_07230 NZ_NPMB01000003.1 Protein Homology CDS 167833 170724 . + 0 ID=cds-WP_080177077.1;Parent=gene-CCO56_RS07230;Dbxref=GenBank:WP_080177077.1;Name=WP_080177077.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230790.1;locus_tag=CCO56_RS07230;product=SNF2-related protein;protein_id=WP_080177077.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 170745 173846 . + . ID=gene-CCO56_RS07235;Name=CCO56_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07235;old_locus_tag=CCO56_07235 NZ_NPMB01000003.1 Protein Homology CDS 170745 173846 . + 0 ID=cds-WP_063917017.1;Parent=gene-CCO56_RS07235;Dbxref=GenBank:WP_063917017.1;Name=WP_063917017.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049830.1;locus_tag=CCO56_RS07235;product=DNA methyltransferase;protein_id=WP_063917017.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 173849 177226 . + . ID=gene-CCO56_RS07240;Name=CCO56_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07240;old_locus_tag=CCO56_07240 NZ_NPMB01000003.1 Protein Homology CDS 173849 177226 . + 0 ID=cds-WP_063917018.1;Parent=gene-CCO56_RS07240;Dbxref=GenBank:WP_063917018.1;Name=WP_063917018.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395336.1;locus_tag=CCO56_RS07240;product=DEAD/DEAH box helicase family protein;protein_id=WP_063917018.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 177274 177576 . - . ID=gene-CCO56_RS07245;Name=CCO56_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07245;old_locus_tag=CCO56_07245 NZ_NPMB01000003.1 Protein Homology CDS 177274 177576 . - 0 ID=cds-WP_024146607.1;Parent=gene-CCO56_RS07245;Dbxref=GenBank:WP_024146607.1;Name=WP_024146607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616541.1;locus_tag=CCO56_RS07245;product=hypothetical protein;protein_id=WP_024146607.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 177717 181232 . - . ID=gene-CCO56_RS07250;Name=CCO56_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07250;old_locus_tag=CCO56_07250 NZ_NPMB01000003.1 Protein Homology CDS 177717 181232 . - 0 ID=cds-WP_063917019.1;Parent=gene-CCO56_RS07250;Dbxref=GenBank:WP_063917019.1;Name=WP_063917019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463348.1;locus_tag=CCO56_RS07250;product=AAA domain-containing protein;protein_id=WP_063917019.1;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 181594 181895 . - . ID=gene-CCO56_RS23725;Name=CCO56_RS23725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23725;partial=true;pseudo=true;start_range=.,181594 NZ_NPMB01000003.1 Protein Homology CDS 181594 181895 . - 0 ID=cds-CCO56_RS23725;Parent=gene-CCO56_RS23725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=CCO56_RS23725;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,181594;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 182317 182625 . - . ID=gene-CCO56_RS07260;Name=CCO56_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07260;old_locus_tag=CCO56_07260 NZ_NPMB01000003.1 Protein Homology CDS 182317 182625 . - 0 ID=cds-WP_001199743.1;Parent=gene-CCO56_RS07260;Dbxref=GenBank:WP_001199743.1;Name=WP_001199743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=CCO56_RS07260;product=CcdB family protein;protein_id=WP_001199743.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 182628 182867 . - . ID=gene-CCO56_RS07265;Name=CCO56_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07265;old_locus_tag=CCO56_07265 NZ_NPMB01000003.1 Protein Homology CDS 182628 182867 . - 0 ID=cds-WP_000016244.1;Parent=gene-CCO56_RS07265;Dbxref=GenBank:WP_000016244.1;Name=WP_000016244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=CCO56_RS07265;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_000016244.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 182976 183200 . - . ID=gene-CCO56_RS07270;Name=CCO56_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07270;old_locus_tag=CCO56_07270 NZ_NPMB01000003.1 Protein Homology CDS 182976 183200 . - 0 ID=cds-WP_031233173.1;Parent=gene-CCO56_RS07270;Dbxref=GenBank:WP_031233173.1;Name=WP_031233173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155191.1;locus_tag=CCO56_RS07270;product=CopG family ribbon-helix-helix protein;protein_id=WP_031233173.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 183678 183762 . - . ID=gene-CCO56_RS07280;Name=CCO56_RS07280;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS07280;old_locus_tag=CCO56_07280 NZ_NPMB01000003.1 tRNAscan-SE tRNA 183678 183762 . - . ID=rna-CCO56_RS07280;Parent=gene-CCO56_RS07280;anticodon=(pos:complement(183726..183728));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS07280;product=tRNA-Leu NZ_NPMB01000003.1 tRNAscan-SE exon 183678 183762 . - . ID=exon-CCO56_RS07280-1;Parent=rna-CCO56_RS07280;anticodon=(pos:complement(183726..183728));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS07280;product=tRNA-Leu NZ_NPMB01000003.1 RefSeq gene 183985 185004 . + . ID=gene-CCO56_RS07285;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=CCO56_RS07285;old_locus_tag=CCO56_07285 NZ_NPMB01000003.1 Protein Homology CDS 183985 185004 . + 0 ID=cds-WP_080177076.1;Parent=gene-CCO56_RS07285;Dbxref=GenBank:WP_080177076.1;Name=WP_080177076.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=CCO56_RS07285;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_080177076.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 185032 185562 . - . ID=gene-CCO56_RS07290;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=CCO56_RS07290;old_locus_tag=CCO56_07290 NZ_NPMB01000003.1 Protein Homology CDS 185032 185562 . - 0 ID=cds-WP_023213568.1;Parent=gene-CCO56_RS07290;Dbxref=GenBank:WP_023213568.1;Name=WP_023213568.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=CCO56_RS07290;product=gluconokinase;protein_id=WP_023213568.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 185779 186810 . + . ID=gene-CCO56_RS07295;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=CCO56_RS07295;old_locus_tag=CCO56_07295 NZ_NPMB01000003.1 Protein Homology CDS 185779 186810 . + 0 ID=cds-WP_079826787.1;Parent=gene-CCO56_RS07295;Dbxref=GenBank:WP_079826787.1;Name=WP_079826787.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=CCO56_RS07295;product=L-idonate 5-dehydrogenase;protein_id=WP_079826787.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 186835 187599 . + . ID=gene-CCO56_RS07300;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=CCO56_RS07300;old_locus_tag=CCO56_07300 NZ_NPMB01000003.1 Protein Homology CDS 186835 187599 . + 0 ID=cds-WP_000998688.1;Parent=gene-CCO56_RS07300;Dbxref=GenBank:WP_000998688.1;Name=WP_000998688.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=CCO56_RS07300;product=gluconate 5-dehydrogenase;protein_id=WP_000998688.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 187661 188980 . + . ID=gene-CCO56_RS07305;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=CCO56_RS07305;old_locus_tag=CCO56_07305 NZ_NPMB01000003.1 Protein Homology CDS 187661 188980 . + 0 ID=cds-WP_001128356.1;Parent=gene-CCO56_RS07305;Dbxref=GenBank:WP_001128356.1;Name=WP_001128356.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=CCO56_RS07305;product=gnt-II system L-idonate transporter;protein_id=WP_001128356.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 189044 190042 . + . ID=gene-CCO56_RS07310;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=CCO56_RS07310;old_locus_tag=CCO56_07310 NZ_NPMB01000003.1 Protein Homology CDS 189044 190042 . + 0 ID=cds-WP_001244061.1;Parent=gene-CCO56_RS07310;Dbxref=GenBank:WP_001244061.1;Name=WP_001244061.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=CCO56_RS07310;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244061.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 190269 191351 . - . ID=gene-CCO56_RS07315;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=CCO56_RS07315;old_locus_tag=CCO56_07315 NZ_NPMB01000003.1 Protein Homology CDS 190269 191351 . - 0 ID=cds-WP_001182242.1;Parent=gene-CCO56_RS07315;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=CCO56_RS07315;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 191351 192451 . - . ID=gene-CCO56_RS07320;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=CCO56_RS07320;old_locus_tag=CCO56_07320 NZ_NPMB01000003.1 Protein Homology CDS 191351 192451 . - 0 ID=cds-WP_000584132.1;Parent=gene-CCO56_RS07320;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=CCO56_RS07320;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 192515 192565 . - . ID=gene-CCO56_RS23735;Name=CCO56_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23735 NZ_NPMB01000003.1 Protein Homology CDS 192515 192565 . - 0 ID=cds-WP_212724070.1;Parent=gene-CCO56_RS23735;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=CCO56_RS23735;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 192846 194357 . + . ID=gene-CCO56_RS07335;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=CCO56_RS07335;old_locus_tag=CCO56_07335 NZ_NPMB01000003.1 Protein Homology CDS 192846 194357 . + 0 ID=cds-WP_000397158.1;Parent=gene-CCO56_RS07335;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=CCO56_RS07335;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 194477 194920 . + . ID=gene-CCO56_RS07340;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=CCO56_RS07340;old_locus_tag=CCO56_07340 NZ_NPMB01000003.1 Protein Homology CDS 194477 194920 . + 0 ID=cds-WP_023251496.1;Parent=gene-CCO56_RS07340;Dbxref=GenBank:WP_023251496.1;Name=WP_023251496.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=CCO56_RS07340;product=DNA polymerase III subunit chi;protein_id=WP_023251496.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 194920 197775 . + . ID=gene-CCO56_RS07345;Name=CCO56_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07345;old_locus_tag=CCO56_07345 NZ_NPMB01000003.1 Protein Homology CDS 194920 197775 . + 0 ID=cds-WP_061377940.1;Parent=gene-CCO56_RS07345;Dbxref=GenBank:WP_061377940.1;Name=WP_061377940.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=CCO56_RS07345;product=valine--tRNA ligase;protein_id=WP_061377940.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 197917 199104 . - . ID=gene-CCO56_RS07350;Name=CCO56_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07350;old_locus_tag=CCO56_07350 NZ_NPMB01000003.1 Protein Homology CDS 197917 199104 . - 0 ID=cds-WP_061377941.1;Parent=gene-CCO56_RS07350;Dbxref=GenBank:WP_061377941.1;Name=WP_061377941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=CCO56_RS07350;product=YjgN family protein;protein_id=WP_061377941.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 199299 199802 . + . ID=gene-CCO56_RS07355;Name=CCO56_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07355;old_locus_tag=CCO56_07355 NZ_NPMB01000003.1 Protein Homology CDS 199299 199802 . + 0 ID=cds-WP_001519079.1;Parent=gene-CCO56_RS07355;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=CCO56_RS07355;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 199909 200397 . + . ID=gene-CCO56_RS07360;Name=CCO56_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07360;old_locus_tag=CCO56_07360 NZ_NPMB01000003.1 Protein Homology CDS 199909 200397 . + 0 ID=cds-WP_061377942.1;Parent=gene-CCO56_RS07360;Dbxref=GenBank:WP_061377942.1;Name=WP_061377942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=CCO56_RS07360;product=DUF3617 domain-containing protein;protein_id=WP_061377942.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 200632 201444 . - . ID=gene-CCO56_RS07365;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=CCO56_RS07365;old_locus_tag=CCO56_07365 NZ_NPMB01000003.1 Protein Homology CDS 200632 201444 . - 0 ID=cds-WP_000218453.1;Parent=gene-CCO56_RS07365;Dbxref=GenBank:WP_000218453.1;Name=WP_000218453.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=CCO56_RS07365;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218453.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 201456 201872 . - . ID=gene-CCO56_RS07370;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=CCO56_RS07370;old_locus_tag=CCO56_07370 NZ_NPMB01000003.1 Protein Homology CDS 201456 201872 . - 0 ID=cds-WP_000002940.1;Parent=gene-CCO56_RS07370;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=CCO56_RS07370;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 201973 202068 . + . ID=gene-CCO56_RS24115;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=CCO56_RS24115 NZ_NPMB01000003.1 Protein Homology CDS 201973 202068 . + 0 ID=cds-WP_223148976.1;Parent=gene-CCO56_RS24115;Dbxref=GenBank:WP_223148976.1;Name=WP_223148976.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=CCO56_RS24115;product=putative translational regulatory protein ArgL;protein_id=WP_223148976.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 202038 203042 . + . ID=gene-CCO56_RS07375;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO56_RS07375;old_locus_tag=CCO56_07375 NZ_NPMB01000003.1 Protein Homology CDS 202038 203042 . + 0 ID=cds-WP_000103041.1;Parent=gene-CCO56_RS07375;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=CCO56_RS07375;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 203116 203568 . - . ID=gene-CCO56_RS07380;Name=CCO56_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07380;old_locus_tag=CCO56_07380 NZ_NPMB01000003.1 Protein Homology CDS 203116 203568 . - 0 ID=cds-WP_001647361.1;Parent=gene-CCO56_RS07380;Dbxref=GenBank:WP_001647361.1;Name=WP_001647361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=CCO56_RS07380;product=YhcH/YjgK/YiaL family protein;protein_id=WP_001647361.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 204245 205465 . + . ID=gene-CCO56_RS07390;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO56_RS07390;old_locus_tag=CCO56_07390 NZ_NPMB01000003.1 Protein Homology CDS 204245 205465 . + 0 ID=cds-WP_061377943.1;Parent=gene-CCO56_RS07390;Dbxref=GenBank:WP_061377943.1;Name=WP_061377943.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=CCO56_RS07390;product=arginine deiminase;protein_id=WP_061377943.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 205476 206408 . + . ID=gene-CCO56_RS07395;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CCO56_RS07395;old_locus_tag=CCO56_07395 NZ_NPMB01000003.1 Protein Homology CDS 205476 206408 . + 0 ID=cds-WP_000428751.1;Parent=gene-CCO56_RS07395;Dbxref=GenBank:WP_000428751.1;Name=WP_000428751.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=CCO56_RS07395;product=carbamate kinase;protein_id=WP_000428751.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 206520 207524 . + . ID=gene-CCO56_RS07400;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO56_RS07400;old_locus_tag=CCO56_07400 NZ_NPMB01000003.1 Protein Homology CDS 206520 207524 . + 0 ID=cds-WP_000237031.1;Parent=gene-CCO56_RS07400;Dbxref=GenBank:WP_000237031.1;Name=WP_000237031.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=CCO56_RS07400;product=ornithine carbamoyltransferase;protein_id=WP_000237031.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 207580 208983 . + . ID=gene-CCO56_RS07405;Name=CCO56_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07405;old_locus_tag=CCO56_07405 NZ_NPMB01000003.1 Protein Homology CDS 207580 208983 . + 0 ID=cds-WP_000514424.1;Parent=gene-CCO56_RS07405;Dbxref=GenBank:WP_000514424.1;Name=WP_000514424.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=CCO56_RS07405;product=YfcC family protein;protein_id=WP_000514424.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 209170 209658 . + . ID=gene-CCO56_RS07410;Name=CCO56_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07410;old_locus_tag=CCO56_07410 NZ_NPMB01000003.1 Protein Homology CDS 209170 209658 . + 0 ID=cds-WP_000666051.1;Parent=gene-CCO56_RS07410;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=CCO56_RS07410;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 209628 209768 . - . ID=gene-CCO56_RS07415;Name=CCO56_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07415;old_locus_tag=CCO56_07415 NZ_NPMB01000003.1 Protein Homology CDS 209628 209768 . - 0 ID=cds-WP_077905461.1;Parent=gene-CCO56_RS07415;Dbxref=GenBank:WP_077905461.1;Name=WP_077905461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=CCO56_RS07415;product=hypothetical protein;protein_id=WP_077905461.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 209748 209849 . + . ID=gene-CCO56_RS07420;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=CCO56_RS07420;old_locus_tag=CCO56_07420 NZ_NPMB01000003.1 Protein Homology CDS 209748 209849 . + 0 ID=cds-WP_000249504.1;Parent=gene-CCO56_RS07420;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=CCO56_RS07420;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 209885 210820 . + . ID=gene-CCO56_RS07425;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=CCO56_RS07425;old_locus_tag=CCO56_07425 NZ_NPMB01000003.1 Protein Homology CDS 209885 210820 . + 0 ID=cds-WP_000013055.1;Parent=gene-CCO56_RS07425;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=CCO56_RS07425;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 210833 211294 . + . ID=gene-CCO56_RS07430;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=CCO56_RS07430;old_locus_tag=CCO56_07430 NZ_NPMB01000003.1 Protein Homology CDS 210833 211294 . + 0 ID=cds-WP_000148566.1;Parent=gene-CCO56_RS07430;Dbxref=GenBank:WP_000148566.1;Name=WP_000148566.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=CCO56_RS07430;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148566.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 211371 211757 . + . ID=gene-CCO56_RS07435;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=CCO56_RS07435;old_locus_tag=CCO56_07435 NZ_NPMB01000003.1 Protein Homology CDS 211371 211757 . + 0 ID=cds-WP_000047544.1;Parent=gene-CCO56_RS07435;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=CCO56_RS07435;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 211846 214554 . - . ID=gene-CCO56_RS07440;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO56_RS07440;old_locus_tag=CCO56_07440 NZ_NPMB01000003.1 Protein Homology CDS 211846 214554 . - 0 ID=cds-WP_023233272.1;Parent=gene-CCO56_RS07440;Dbxref=GenBank:WP_023233272.1;Name=WP_023233272.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=CCO56_RS07440;product=magnesium-translocating P-type ATPase;protein_id=WP_023233272.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 214695 214793 . - . ID=gene-CCO56_RS24120;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=CCO56_RS24120 NZ_NPMB01000003.1 Protein Homology CDS 214695 214793 . - 0 ID=cds-WP_107320725.1;Parent=gene-CCO56_RS24120;Dbxref=GenBank:WP_107320725.1;Name=WP_107320725.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=CCO56_RS24120;product=mgtA regulatory leader peptide MgtL;protein_id=WP_107320725.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 214938 215885 . + . ID=gene-CCO56_RS07445;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CCO56_RS07445;old_locus_tag=CCO56_07445 NZ_NPMB01000003.1 Protein Homology CDS 214938 215885 . + 0 ID=cds-WP_001181297.1;Parent=gene-CCO56_RS07445;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=CCO56_RS07445;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 216023 217441 . + . ID=gene-CCO56_RS07450;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=CCO56_RS07450;old_locus_tag=CCO56_07450 NZ_NPMB01000003.1 Protein Homology CDS 216023 217441 . + 0 ID=cds-WP_001631984.1;Parent=gene-CCO56_RS07450;Dbxref=GenBank:WP_001631984.1;Name=WP_001631984.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=CCO56_RS07450;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001631984.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 217491 219143 . + . ID=gene-CCO56_RS07455;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CCO56_RS07455;old_locus_tag=CCO56_07455 NZ_NPMB01000003.1 Protein Homology CDS 217491 219143 . + 0 ID=cds-WP_023217642.1;Parent=gene-CCO56_RS07455;Dbxref=GenBank:WP_023217642.1;Name=WP_023217642.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=CCO56_RS07455;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_023217642.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 219552 221690 . + . ID=gene-CCO56_RS07460;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CCO56_RS07460;old_locus_tag=CCO56_07460 NZ_NPMB01000003.1 Protein Homology CDS 219552 221690 . + 0 ID=cds-WP_000187815.1;Parent=gene-CCO56_RS07460;Dbxref=GenBank:WP_000187815.1;Name=WP_000187815.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=CCO56_RS07460;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187815.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 221907 222371 . + . ID=gene-CCO56_RS07465;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CCO56_RS07465;old_locus_tag=CCO56_07465 NZ_NPMB01000003.1 Protein Homology CDS 221907 222371 . + 0 ID=cds-WP_001009178.1;Parent=gene-CCO56_RS07465;Dbxref=GenBank:WP_001009178.1;Name=WP_001009178.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=CCO56_RS07465;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001009178.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 222375 222659 . - . ID=gene-CCO56_RS07470;Name=CCO56_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07470;old_locus_tag=CCO56_07470 NZ_NPMB01000003.1 Protein Homology CDS 222375 222659 . - 0 ID=cds-WP_000220578.1;Parent=gene-CCO56_RS07470;Dbxref=GenBank:WP_000220578.1;Name=WP_000220578.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=CCO56_RS07470;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220578.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 222649 222891 . - . ID=gene-CCO56_RS07475;Name=CCO56_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07475;old_locus_tag=CCO56_07475 NZ_NPMB01000003.1 Protein Homology CDS 222649 222891 . - 0 ID=cds-WP_000212724.1;Parent=gene-CCO56_RS07475;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=CCO56_RS07475;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 222969 224882 . - . ID=gene-CCO56_RS07480;Name=CCO56_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07480;old_locus_tag=CCO56_07480 NZ_NPMB01000003.1 Protein Homology CDS 222969 224882 . - 0 ID=cds-WP_061377944.1;Parent=gene-CCO56_RS07480;Dbxref=GenBank:WP_061377944.1;Name=WP_061377944.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=CCO56_RS07480;product=BglG family transcription antiterminator;protein_id=WP_061377944.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 224899 225639 . - . ID=gene-CCO56_RS07485;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO56_RS07485;old_locus_tag=CCO56_07485 NZ_NPMB01000003.1 Protein Homology CDS 224899 225639 . - 0 ID=cds-WP_024797427.1;Parent=gene-CCO56_RS07485;Dbxref=GenBank:WP_024797427.1;Name=WP_024797427.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=CCO56_RS07485;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_024797427.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 225636 226754 . - . ID=gene-CCO56_RS07490;Name=CCO56_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07490;old_locus_tag=CCO56_07490 NZ_NPMB01000003.1 Protein Homology CDS 225636 226754 . - 0 ID=cds-WP_061377945.1;Parent=gene-CCO56_RS07490;Dbxref=GenBank:WP_061377945.1;Name=WP_061377945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=CCO56_RS07490;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_061377945.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 226738 227871 . - . ID=gene-CCO56_RS07495;Name=CCO56_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07495;old_locus_tag=CCO56_07495 NZ_NPMB01000003.1 Protein Homology CDS 226738 227871 . - 0 ID=cds-WP_061377946.1;Parent=gene-CCO56_RS07495;Dbxref=GenBank:WP_061377946.1;Name=WP_061377946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=CCO56_RS07495;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_061377946.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 227930 228574 . - . ID=gene-CCO56_RS07500;Name=CCO56_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07500;old_locus_tag=CCO56_07500 NZ_NPMB01000003.1 Protein Homology CDS 227930 228574 . - 0 ID=cds-WP_000392127.1;Parent=gene-CCO56_RS07500;Dbxref=GenBank:WP_000392127.1;Name=WP_000392127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=CCO56_RS07500;product=DUF4310 family protein;protein_id=WP_000392127.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 228586 229362 . - . ID=gene-CCO56_RS07505;Name=CCO56_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07505;old_locus_tag=CCO56_07505 NZ_NPMB01000003.1 Protein Homology CDS 228586 229362 . - 0 ID=cds-WP_000478578.1;Parent=gene-CCO56_RS07505;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=CCO56_RS07505;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 229385 229687 . - . ID=gene-CCO56_RS07510;Name=CCO56_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07510;old_locus_tag=CCO56_07510 NZ_NPMB01000003.1 Protein Homology CDS 229385 229687 . - 0 ID=cds-WP_000975187.1;Parent=gene-CCO56_RS07510;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=CCO56_RS07510;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 229687 230049 . - . ID=gene-CCO56_RS07515;Name=CCO56_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07515;old_locus_tag=CCO56_07515 NZ_NPMB01000003.1 Protein Homology CDS 229687 230049 . - 0 ID=cds-WP_000435393.1;Parent=gene-CCO56_RS07515;Dbxref=GenBank:WP_000435393.1;Name=WP_000435393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=CCO56_RS07515;product=SFCGS family glycine-rich protein;protein_id=WP_000435393.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 230060 230398 . - . ID=gene-CCO56_RS07520;Name=CCO56_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07520;old_locus_tag=CCO56_07520 NZ_NPMB01000003.1 Protein Homology CDS 230060 230398 . - 0 ID=cds-WP_001255103.1;Parent=gene-CCO56_RS07520;Dbxref=GenBank:WP_001255103.1;Name=WP_001255103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=CCO56_RS07520;product=glycine dehydrogenase;protein_id=WP_001255103.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 230676 231062 . - . ID=gene-CCO56_RS07525;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=CCO56_RS07525;old_locus_tag=CCO56_07525 NZ_NPMB01000003.1 Protein Homology CDS 230676 231062 . - 0 ID=cds-WP_001232231.1;Parent=gene-CCO56_RS07525;Dbxref=GenBank:WP_001232231.1;Name=WP_001232231.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=CCO56_RS07525;product=cytochrome b562;protein_id=WP_001232231.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 231161 232513 . - . ID=gene-CCO56_RS07530;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=CCO56_RS07530;old_locus_tag=CCO56_07530 NZ_NPMB01000003.1 Protein Homology CDS 231161 232513 . - 0 ID=cds-WP_000852997.1;Parent=gene-CCO56_RS07530;Dbxref=GenBank:WP_000852997.1;Name=WP_000852997.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=CCO56_RS07530;product=metalloprotease PmbA;protein_id=WP_000852997.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 232609 233160 . + . ID=gene-CCO56_RS07535;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=CCO56_RS07535;old_locus_tag=CCO56_07535 NZ_NPMB01000003.1 Protein Homology CDS 232609 233160 . + 0 ID=cds-WP_000166287.1;Parent=gene-CCO56_RS07535;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=CCO56_RS07535;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 233267 234640 . - . ID=gene-CCO56_RS07540;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=CCO56_RS07540;old_locus_tag=CCO56_07540 NZ_NPMB01000003.1 Protein Homology CDS 233267 234640 . - 0 ID=cds-WP_001219832.1;Parent=gene-CCO56_RS07540;Dbxref=GenBank:WP_001219832.1;Name=WP_001219832.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=CCO56_RS07540;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219832.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 234815 235813 . + . ID=gene-CCO56_RS07545;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=CCO56_RS07545;old_locus_tag=CCO56_07545 NZ_NPMB01000003.1 Protein Homology CDS 234815 235813 . + 0 ID=cds-WP_000853764.1;Parent=gene-CCO56_RS07545;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=CCO56_RS07545;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 236040 236570 . + . ID=gene-CCO56_RS07550;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=CCO56_RS07550;old_locus_tag=CCO56_07550 NZ_NPMB01000003.1 Protein Homology CDS 236040 236570 . + 0 ID=cds-WP_080177075.1;Parent=gene-CCO56_RS07550;Dbxref=GenBank:WP_080177075.1;Name=WP_080177075.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=CCO56_RS07550;product=inorganic diphosphatase;protein_id=WP_080177075.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 236980 238143 . + . ID=gene-CCO56_RS07555;Name=CCO56_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07555;old_locus_tag=CCO56_07555 NZ_NPMB01000003.1 Protein Homology CDS 236980 238143 . + 0 ID=cds-WP_000977212.1;Parent=gene-CCO56_RS07555;Dbxref=GenBank:WP_000977212.1;Name=WP_000977212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=CCO56_RS07555;product=metallo-dependent hydrolase;protein_id=WP_000977212.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 238140 239348 . + . ID=gene-CCO56_RS07560;Name=CCO56_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07560;old_locus_tag=CCO56_07560 NZ_NPMB01000003.1 Protein Homology CDS 238140 239348 . + 0 ID=cds-WP_000203125.1;Parent=gene-CCO56_RS07560;Dbxref=GenBank:WP_000203125.1;Name=WP_000203125.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=CCO56_RS07560;product=MFS transporter;protein_id=WP_000203125.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 239402 239746 . - . ID=gene-CCO56_RS07565;Name=CCO56_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07565;old_locus_tag=CCO56_07565 NZ_NPMB01000003.1 Protein Homology CDS 239402 239746 . - 0 ID=cds-WP_001219167.1;Parent=gene-CCO56_RS07565;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=CCO56_RS07565;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 239749 243528 . - . ID=gene-CCO56_RS07570;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=CCO56_RS07570;old_locus_tag=CCO56_07570 NZ_NPMB01000003.1 Protein Homology CDS 239749 243528 . - 0 ID=cds-WP_058108863.1;Parent=gene-CCO56_RS07570;Dbxref=GenBank:WP_058108863.1;Name=WP_058108863.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=CCO56_RS07570;product=autotransporter assembly complex protein TamB;protein_id=WP_058108863.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 243525 245258 . - . ID=gene-CCO56_RS07575;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=CCO56_RS07575;old_locus_tag=CCO56_07575 NZ_NPMB01000003.1 Protein Homology CDS 243525 245258 . - 0 ID=cds-WP_001120237.1;Parent=gene-CCO56_RS07575;Dbxref=GenBank:WP_001120237.1;Name=WP_001120237.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=CCO56_RS07575;product=autotransporter assembly complex protein TamA;protein_id=WP_001120237.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 245471 246109 . + . ID=gene-CCO56_RS07580;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CCO56_RS07580;old_locus_tag=CCO56_07580 NZ_NPMB01000003.1 Protein Homology CDS 245471 246109 . + 0 ID=cds-WP_080177074.1;Parent=gene-CCO56_RS07580;Dbxref=GenBank:WP_080177074.1;Name=WP_080177074.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=CCO56_RS07580;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_080177074.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 246292 247635 . + . ID=gene-CCO56_RS07585;Name=CCO56_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07585;old_locus_tag=CCO56_07585 NZ_NPMB01000003.1 Protein Homology CDS 246292 247635 . + 0 ID=cds-WP_000934970.1;Parent=gene-CCO56_RS07585;Dbxref=GenBank:WP_000934970.1;Name=WP_000934970.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=CCO56_RS07585;product=hemolysin family protein;protein_id=WP_000934970.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 247719 247925 . - . ID=gene-CCO56_RS07590;Name=CCO56_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07590;old_locus_tag=CCO56_07590 NZ_NPMB01000003.1 Protein Homology CDS 247719 247925 . - 0 ID=cds-WP_000689229.1;Parent=gene-CCO56_RS07590;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=CCO56_RS07590;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 248252 248809 . + . ID=gene-CCO56_RS07600;Name=CCO56_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07600;old_locus_tag=CCO56_07600 NZ_NPMB01000003.1 Protein Homology CDS 248252 248809 . + 0 ID=cds-WP_000175305.1;Parent=gene-CCO56_RS07600;Dbxref=GenBank:WP_000175305.1;Name=WP_000175305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=CCO56_RS07600;product=YtfJ family protein;protein_id=WP_000175305.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 248799 249539 . - . ID=gene-CCO56_RS07605;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=CCO56_RS07605;old_locus_tag=CCO56_07605 NZ_NPMB01000003.1 Protein Homology CDS 248799 249539 . - 0 ID=cds-WP_000893398.1;Parent=gene-CCO56_RS07605;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=CCO56_RS07605;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 249807 251750 . + . ID=gene-CCO56_RS07615;Name=CCO56_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07615;old_locus_tag=CCO56_07615 NZ_NPMB01000003.1 Protein Homology CDS 249807 251750 . + 0 ID=cds-WP_080177073.1;Parent=gene-CCO56_RS07615;Dbxref=GenBank:WP_080177073.1;Name=WP_080177073.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=CCO56_RS07615;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_080177073.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 251808 252194 . - . ID=gene-CCO56_RS07620;Name=CCO56_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07620;old_locus_tag=CCO56_07620 NZ_NPMB01000003.1 Protein Homology CDS 251808 252194 . - 0 ID=cds-WP_001201295.1;Parent=gene-CCO56_RS07620;Dbxref=GenBank:WP_001201295.1;Name=WP_001201295.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=CCO56_RS07620;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201295.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 252282 253130 . + . ID=gene-CCO56_RS07625;Name=CCO56_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07625;old_locus_tag=CCO56_07625 NZ_NPMB01000003.1 Protein Homology CDS 252282 253130 . + 0 ID=cds-WP_000560619.1;Parent=gene-CCO56_RS07625;Dbxref=GenBank:WP_000560619.1;Name=WP_000560619.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=CCO56_RS07625;product=SDR family oxidoreductase;protein_id=WP_000560619.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 253211 254176 . + . ID=gene-CCO56_RS07630;Name=CCO56_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07630;old_locus_tag=CCO56_07630 NZ_NPMB01000003.1 Protein Homology CDS 253211 254176 . + 0 ID=cds-WP_000623290.1;Parent=gene-CCO56_RS07630;Dbxref=GenBank:WP_000623290.1;Name=WP_000623290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=CCO56_RS07630;product=DMT family transporter;protein_id=WP_000623290.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 254279 254941 . + . ID=gene-CCO56_RS07635;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=CCO56_RS07635;old_locus_tag=CCO56_07635 NZ_NPMB01000003.1 Protein Homology CDS 254279 254941 . + 0 ID=cds-WP_000331471.1;Parent=gene-CCO56_RS07635;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=CCO56_RS07635;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 255053 256462 . - . ID=gene-CCO56_RS07640;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=CCO56_RS07640;old_locus_tag=CCO56_07640 NZ_NPMB01000003.1 Protein Homology CDS 255053 256462 . - 0 ID=cds-WP_000228323.1;Parent=gene-CCO56_RS07640;Dbxref=GenBank:WP_000228323.1;Name=WP_000228323.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=CCO56_RS07640;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228323.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 256758 257378 . - . ID=gene-CCO56_RS07645;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=CCO56_RS07645;old_locus_tag=CCO56_07645 NZ_NPMB01000003.1 Protein Homology CDS 256758 257378 . - 0 ID=cds-WP_000235161.1;Parent=gene-CCO56_RS07645;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=CCO56_RS07645;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000235161.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 257598 258233 . + . ID=gene-CCO56_RS07650;Name=CCO56_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07650;old_locus_tag=CCO56_07650 NZ_NPMB01000003.1 Protein Homology CDS 257598 258233 . + 0 ID=cds-WP_001119444.1;Parent=gene-CCO56_RS07650;Dbxref=GenBank:WP_001119444.1;Name=WP_001119444.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=CCO56_RS07650;product=OapA family protein;protein_id=WP_001119444.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 258283 259209 . - . ID=gene-CCO56_RS07655;Name=CCO56_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07655;old_locus_tag=CCO56_07655 NZ_NPMB01000003.1 Protein Homology CDS 258283 259209 . - 0 ID=cds-WP_000381075.1;Parent=gene-CCO56_RS07655;Dbxref=GenBank:WP_000381075.1;Name=WP_000381075.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=CCO56_RS07655;product=DMT family transporter;protein_id=WP_000381075.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 259357 259806 . - . ID=gene-CCO56_RS07660;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CCO56_RS07660;old_locus_tag=CCO56_07660 NZ_NPMB01000003.1 Protein Homology CDS 259357 259806 . - 0 ID=cds-WP_001196065.1;Parent=gene-CCO56_RS07660;Dbxref=GenBank:WP_001196065.1;Name=WP_001196065.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=CCO56_RS07660;product=50S ribosomal protein L9;protein_id=WP_001196065.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 259848 260075 . - . ID=gene-CCO56_RS07665;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CCO56_RS07665;old_locus_tag=CCO56_07665 NZ_NPMB01000003.1 Protein Homology CDS 259848 260075 . - 0 ID=cds-WP_000135199.1;Parent=gene-CCO56_RS07665;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=CCO56_RS07665;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 260080 260394 . - . ID=gene-CCO56_RS07670;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=CCO56_RS07670;old_locus_tag=CCO56_07670 NZ_NPMB01000003.1 Protein Homology CDS 260080 260394 . - 0 ID=cds-WP_001747015.1;Parent=gene-CCO56_RS07670;Dbxref=GenBank:WP_001747015.1;Name=WP_001747015.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=CCO56_RS07670;product=primosomal replication protein N;protein_id=WP_001747015.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 260401 260796 . - . ID=gene-CCO56_RS07675;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CCO56_RS07675;old_locus_tag=CCO56_07675 NZ_NPMB01000003.1 Protein Homology CDS 260401 260796 . - 0 ID=cds-WP_001216673.1;Parent=gene-CCO56_RS07675;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=CCO56_RS07675;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 261183 261458 . + . ID=gene-CCO56_RS07685;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=CCO56_RS07685;old_locus_tag=CCO56_07685 NZ_NPMB01000003.1 Protein Homology CDS 261183 261458 . + 0 ID=cds-WP_000466076.1;Parent=gene-CCO56_RS07685;Dbxref=GenBank:WP_000466076.1;Name=WP_000466076.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=CCO56_RS07685;product=DUF1471 family protein YjfY;protein_id=WP_000466076.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 261511 262068 . - . ID=gene-CCO56_RS07690;Name=CCO56_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07690;old_locus_tag=CCO56_07690 NZ_NPMB01000003.1 Protein Homology CDS 261511 262068 . - 0 ID=cds-WP_000026294.1;Parent=gene-CCO56_RS07690;Dbxref=GenBank:WP_000026294.1;Name=WP_000026294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=CCO56_RS07690;product=YagU family protein;protein_id=WP_000026294.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 262156 262842 . - . ID=gene-CCO56_RS07695;Name=CCO56_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07695;old_locus_tag=CCO56_07695 NZ_NPMB01000003.1 Protein Homology CDS 262156 262842 . - 0 ID=cds-WP_001170774.1;Parent=gene-CCO56_RS07695;Dbxref=GenBank:WP_001170774.1;Name=WP_001170774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=CCO56_RS07695;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170774.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 262842 263696 . - . ID=gene-CCO56_RS07700;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=CCO56_RS07700;old_locus_tag=CCO56_07700 NZ_NPMB01000003.1 Protein Homology CDS 262842 263696 . - 0 ID=cds-WP_000949530.1;Parent=gene-CCO56_RS07700;Dbxref=GenBank:WP_000949530.1;Name=WP_000949530.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=CCO56_RS07700;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949530.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 263706 264356 . - . ID=gene-CCO56_RS07705;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO56_RS07705;old_locus_tag=CCO56_07705 NZ_NPMB01000003.1 Protein Homology CDS 263706 264356 . - 0 ID=cds-WP_000056761.1;Parent=gene-CCO56_RS07705;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=CCO56_RS07705;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 264370 264834 . - . ID=gene-CCO56_RS07710;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=CCO56_RS07710;old_locus_tag=CCO56_07710 NZ_NPMB01000003.1 Protein Homology CDS 264370 264834 . - 0 ID=cds-WP_000776537.1;Parent=gene-CCO56_RS07710;Dbxref=GenBank:WP_000776537.1;Name=WP_000776537.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=CCO56_RS07710;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776537.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 264844 265149 . - . ID=gene-CCO56_RS07715;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=CCO56_RS07715;old_locus_tag=CCO56_07715 NZ_NPMB01000003.1 Protein Homology CDS 264844 265149 . - 0 ID=cds-WP_000218358.1;Parent=gene-CCO56_RS07715;Dbxref=GenBank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=CCO56_RS07715;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 265165 266562 . - . ID=gene-CCO56_RS07720;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=CCO56_RS07720;old_locus_tag=CCO56_07720 NZ_NPMB01000003.1 Protein Homology CDS 265165 266562 . - 0 ID=cds-WP_000404876.1;Parent=gene-CCO56_RS07720;Dbxref=GenBank:WP_000404876.1;Name=WP_000404876.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=CCO56_RS07720;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404876.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 266925 267989 . + . ID=gene-CCO56_RS07725;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CCO56_RS07725;old_locus_tag=CCO56_07725 NZ_NPMB01000003.1 Protein Homology CDS 266925 267989 . + 0 ID=cds-WP_000049161.1;Parent=gene-CCO56_RS07725;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=CCO56_RS07725;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 268094 268849 . + . ID=gene-CCO56_RS07730;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=CCO56_RS07730;old_locus_tag=CCO56_07730 NZ_NPMB01000003.1 Protein Homology CDS 268094 268849 . + 0 ID=cds-WP_000133618.1;Parent=gene-CCO56_RS07730;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=CCO56_RS07730;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 268846 269595 . - . ID=gene-CCO56_RS07735;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=CCO56_RS07735;old_locus_tag=CCO56_07735 NZ_NPMB01000003.1 Protein Homology CDS 268846 269595 . - 0 ID=cds-WP_000560303.1;Parent=gene-CCO56_RS07735;Dbxref=GenBank:WP_000560303.1;Name=WP_000560303.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=CCO56_RS07735;product=esterase;protein_id=WP_000560303.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 269779 270108 . + . ID=gene-CCO56_RS07740;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=CCO56_RS07740;old_locus_tag=CCO56_07740 NZ_NPMB01000003.1 Protein Homology CDS 269779 270108 . + 0 ID=cds-WP_000586836.1;Parent=gene-CCO56_RS07740;Dbxref=GenBank:WP_000586836.1;Name=WP_000586836.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=CCO56_RS07740;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586836.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 270239 270514 . + . ID=gene-CCO56_RS07745;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=CCO56_RS07745;old_locus_tag=CCO56_07745 NZ_NPMB01000003.1 Protein Homology CDS 270239 270514 . + 0 ID=cds-WP_001518964.1;Parent=gene-CCO56_RS07745;Dbxref=GenBank:WP_001518964.1;Name=WP_001518964.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=CCO56_RS07745;product=DUF1471 family protease activator YjfN;protein_id=WP_001518964.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 270592 272214 . - . ID=gene-CCO56_RS07750;Name=CCO56_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07750;old_locus_tag=CCO56_07750 NZ_NPMB01000003.1 Protein Homology CDS 270592 272214 . - 0 ID=cds-WP_000118970.1;Parent=gene-CCO56_RS07750;Dbxref=GenBank:WP_000118970.1;Name=WP_000118970.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=CCO56_RS07750;product=isovaleryl-CoA dehydrogenase;protein_id=WP_000118970.1;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 272299 273462 . - . ID=gene-CCO56_RS07755;Name=CCO56_RS07755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS07755;old_locus_tag=CCO56_07755;pseudo=true NZ_NPMB01000003.1 Protein Homology CDS 272299 273462 . - 0 ID=cds-CCO56_RS07755;Parent=gene-CCO56_RS07755;Note=internal stop;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=CCO56_RS07755;product=glutathionylspermidine synthase family protein;pseudo=true;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 273465 274103 . - . ID=gene-CCO56_RS07760;Name=CCO56_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07760;old_locus_tag=CCO56_07760 NZ_NPMB01000003.1 Protein Homology CDS 273465 274103 . - 0 ID=cds-WP_080177072.1;Parent=gene-CCO56_RS07760;Dbxref=GenBank:WP_080177072.1;Name=WP_080177072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=CCO56_RS07760;product=DUF1190 domain-containing protein;protein_id=WP_080177072.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 274113 274511 . - . ID=gene-CCO56_RS07765;Name=CCO56_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07765;old_locus_tag=CCO56_07765 NZ_NPMB01000003.1 Protein Homology CDS 274113 274511 . - 0 ID=cds-WP_000547736.1;Parent=gene-CCO56_RS07765;Dbxref=GenBank:WP_000547736.1;Name=WP_000547736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=CCO56_RS07765;product=DUF350 domain-containing protein;protein_id=WP_000547736.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 274529 275212 . - . ID=gene-CCO56_RS07770;Name=CCO56_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07770;old_locus_tag=CCO56_07770 NZ_NPMB01000003.1 Protein Homology CDS 274529 275212 . - 0 ID=cds-WP_000090295.1;Parent=gene-CCO56_RS07770;Dbxref=GenBank:WP_000090295.1;Name=WP_000090295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=CCO56_RS07770;product=YjfK family protein;protein_id=WP_000090295.1;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 275334 275421 . - . ID=gene-CCO56_RS23745;Name=CCO56_RS23745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23745;partial=true;pseudo=true;start_range=.,275334 NZ_NPMB01000003.1 Protein Homology CDS 275334 275421 . - 0 ID=cds-CCO56_RS23745;Parent=gene-CCO56_RS23745;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=CCO56_RS23745;partial=true;product=hypothetical protein;pseudo=true;start_range=.,275334;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 275421 276119 . - . ID=gene-CCO56_RS07775;Name=CCO56_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07775;old_locus_tag=CCO56_07775 NZ_NPMB01000003.1 Protein Homology CDS 275421 276119 . - 0 ID=cds-WP_000511981.1;Parent=gene-CCO56_RS07775;Dbxref=GenBank:WP_000511981.1;Name=WP_000511981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=CCO56_RS07775;product=PspA/IM30 family protein;protein_id=WP_000511981.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 276134 276538 . - . ID=gene-CCO56_RS07780;Name=CCO56_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07780;old_locus_tag=CCO56_07780 NZ_NPMB01000003.1 Protein Homology CDS 276134 276538 . - 0 ID=cds-WP_000312605.1;Parent=gene-CCO56_RS07780;Dbxref=GenBank:WP_000312605.1;Name=WP_000312605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=CCO56_RS07780;product=YjfI family protein;protein_id=WP_000312605.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 276671 277402 . - . ID=gene-CCO56_RS07785;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CCO56_RS07785;old_locus_tag=CCO56_07785 NZ_NPMB01000003.1 Protein Homology CDS 276671 277402 . - 0 ID=cds-WP_001293288.1;Parent=gene-CCO56_RS07785;Dbxref=GenBank:WP_001293288.1;Name=WP_001293288.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=CCO56_RS07785;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293288.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 277493 279931 . - . ID=gene-CCO56_RS07790;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CCO56_RS07790;old_locus_tag=CCO56_07790 NZ_NPMB01000003.1 Protein Homology CDS 277493 279931 . - 0 ID=cds-WP_000076351.1;Parent=gene-CCO56_RS07790;Dbxref=GenBank:WP_000076351.1;Name=WP_000076351.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=CCO56_RS07790;product=ribonuclease R;protein_id=WP_000076351.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 279969 280394 . - . ID=gene-CCO56_RS07795;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=CCO56_RS07795;old_locus_tag=CCO56_07795 NZ_NPMB01000003.1 Protein Homology CDS 279969 280394 . - 0 ID=cds-WP_001177632.1;Parent=gene-CCO56_RS07795;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=CCO56_RS07795;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 280614 281912 . - . ID=gene-CCO56_RS07805;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=CCO56_RS07805;old_locus_tag=CCO56_07805 NZ_NPMB01000003.1 Protein Homology CDS 280614 281912 . - 0 ID=cds-WP_000527972.1;Parent=gene-CCO56_RS07805;Dbxref=GenBank:WP_000527972.1;Name=WP_000527972.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=CCO56_RS07805;product=adenylosuccinate synthase;protein_id=WP_000527972.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 282015 282212 . - . ID=gene-CCO56_RS07810;Name=CCO56_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07810;old_locus_tag=CCO56_07810 NZ_NPMB01000003.1 Protein Homology CDS 282015 282212 . - 0 ID=cds-WP_001089290.1;Parent=gene-CCO56_RS07810;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=CCO56_RS07810;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 282291 283295 . - . ID=gene-CCO56_RS07815;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=CCO56_RS07815;old_locus_tag=CCO56_07815 NZ_NPMB01000003.1 Protein Homology CDS 282291 283295 . - 0 ID=cds-WP_001232417.1;Parent=gene-CCO56_RS07815;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=CCO56_RS07815;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 283298 284557 . - . ID=gene-CCO56_RS07820;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=CCO56_RS07820;old_locus_tag=CCO56_07820 NZ_NPMB01000003.1 Protein Homology CDS 283298 284557 . - 0 ID=cds-WP_023231120.1;Parent=gene-CCO56_RS07820;Dbxref=GenBank:WP_023231120.1;Name=WP_023231120.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=CCO56_RS07820;product=FtsH protease activity modulator HflK;protein_id=WP_023231120.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 284772 286052 . - . ID=gene-CCO56_RS07825;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CCO56_RS07825;old_locus_tag=CCO56_07825 NZ_NPMB01000003.1 Protein Homology CDS 284772 286052 . - 0 ID=cds-WP_023223752.1;Parent=gene-CCO56_RS07825;Dbxref=GenBank:WP_023223752.1;Name=WP_023223752.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=CCO56_RS07825;product=ribosome rescue GTPase HflX;protein_id=WP_023223752.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 286124 286432 . - . ID=gene-CCO56_RS07830;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CCO56_RS07830;old_locus_tag=CCO56_07830 NZ_NPMB01000003.1 Protein Homology CDS 286124 286432 . - 0 ID=cds-WP_001051875.1;Parent=gene-CCO56_RS07830;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=CCO56_RS07830;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 286515 287465 . - . ID=gene-CCO56_RS07835;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CCO56_RS07835;old_locus_tag=CCO56_07835 NZ_NPMB01000003.1 Protein Homology CDS 286515 287465 . - 0 ID=cds-WP_001000734.1;Parent=gene-CCO56_RS07835;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=CCO56_RS07835;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 287458 289314 . - . ID=gene-CCO56_RS07840;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CCO56_RS07840;old_locus_tag=CCO56_07840 NZ_NPMB01000003.1 Protein Homology CDS 287458 289314 . - 0 ID=cds-WP_058111665.1;Parent=gene-CCO56_RS07840;Dbxref=GenBank:WP_058111665.1;Name=WP_058111665.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=CCO56_RS07840;product=DNA mismatch repair endonuclease MutL;protein_id=WP_058111665.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 289324 290643 . - . ID=gene-CCO56_RS07845;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=CCO56_RS07845;old_locus_tag=CCO56_07845 NZ_NPMB01000003.1 Protein Homology CDS 289324 290643 . - 0 ID=cds-WP_000640350.1;Parent=gene-CCO56_RS07845;Dbxref=GenBank:WP_000640350.1;Name=WP_000640350.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=CCO56_RS07845;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640350.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 290660 291121 . - . ID=gene-CCO56_RS07850;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CCO56_RS07850;old_locus_tag=CCO56_07850 NZ_NPMB01000003.1 Protein Homology CDS 290660 291121 . - 0 ID=cds-WP_000981984.1;Parent=gene-CCO56_RS07850;Dbxref=GenBank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=CCO56_RS07850;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 291093 292640 . - . ID=gene-CCO56_RS07855;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=CCO56_RS07855;old_locus_tag=CCO56_07855 NZ_NPMB01000003.1 Protein Homology CDS 291093 292640 . - 0 ID=cds-WP_000968675.1;Parent=gene-CCO56_RS07855;Dbxref=GenBank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=CCO56_RS07855;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 292639 293778 . + . ID=gene-CCO56_RS07860;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CCO56_RS07860;old_locus_tag=CCO56_07860 NZ_NPMB01000003.1 Protein Homology CDS 292639 293778 . + 0 ID=cds-WP_001670426.1;Parent=gene-CCO56_RS07860;Dbxref=GenBank:WP_001670426.1;Name=WP_001670426.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=CCO56_RS07860;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001670426.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 294048 294123 . - . ID=gene-CCO56_RS07865;Name=CCO56_RS07865;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS07865;old_locus_tag=CCO56_07865 NZ_NPMB01000003.1 tRNAscan-SE tRNA 294048 294123 . - . ID=rna-CCO56_RS07865;Parent=gene-CCO56_RS07865;anticodon=(pos:complement(294088..294090));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS07865;product=tRNA-Gly NZ_NPMB01000003.1 tRNAscan-SE exon 294048 294123 . - . ID=exon-CCO56_RS07865-1;Parent=rna-CCO56_RS07865;anticodon=(pos:complement(294088..294090));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS07865;product=tRNA-Gly NZ_NPMB01000003.1 RefSeq gene 294280 294355 . - . ID=gene-CCO56_RS07870;Name=CCO56_RS07870;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS07870;old_locus_tag=CCO56_07870 NZ_NPMB01000003.1 tRNAscan-SE tRNA 294280 294355 . - . ID=rna-CCO56_RS07870;Parent=gene-CCO56_RS07870;anticodon=(pos:complement(294320..294322));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS07870;product=tRNA-Gly NZ_NPMB01000003.1 tRNAscan-SE exon 294280 294355 . - . ID=exon-CCO56_RS07870-1;Parent=rna-CCO56_RS07870;anticodon=(pos:complement(294320..294322));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS07870;product=tRNA-Gly NZ_NPMB01000003.1 RefSeq gene 294393 294468 . - . ID=gene-CCO56_RS07875;Name=CCO56_RS07875;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS07875;old_locus_tag=CCO56_07875 NZ_NPMB01000003.1 tRNAscan-SE tRNA 294393 294468 . - . ID=rna-CCO56_RS07875;Parent=gene-CCO56_RS07875;anticodon=(pos:complement(294433..294435));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS07875;product=tRNA-Gly NZ_NPMB01000003.1 tRNAscan-SE exon 294393 294468 . - . ID=exon-CCO56_RS07875-1;Parent=rna-CCO56_RS07875;anticodon=(pos:complement(294433..294435));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS07875;product=tRNA-Gly NZ_NPMB01000003.1 RefSeq gene 294744 295484 . + . ID=gene-CCO56_RS07880;Name=CCO56_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07880;old_locus_tag=CCO56_07880 NZ_NPMB01000003.1 Protein Homology CDS 294744 295484 . + 0 ID=cds-WP_000727892.1;Parent=gene-CCO56_RS07880;Dbxref=GenBank:WP_000727892.1;Name=WP_000727892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=CCO56_RS07880;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727892.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 295546 296091 . - . ID=gene-CCO56_RS07885;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=CCO56_RS07885;old_locus_tag=CCO56_07885 NZ_NPMB01000003.1 Protein Homology CDS 295546 296091 . - 0 ID=cds-WP_094882039.1;Parent=gene-CCO56_RS07885;Dbxref=GenBank:WP_094882039.1;Name=WP_094882039.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=CCO56_RS07885;product=oligoribonuclease;protein_id=WP_094882039.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 296198 297250 . + . ID=gene-CCO56_RS07890;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CCO56_RS07890;old_locus_tag=CCO56_07890 NZ_NPMB01000003.1 Protein Homology CDS 296198 297250 . + 0 ID=cds-WP_000041945.1;Parent=gene-CCO56_RS07890;Dbxref=GenBank:WP_000041945.1;Name=WP_000041945.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=CCO56_RS07890;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041945.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 297342 298310 . + . ID=gene-CCO56_RS07895;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO56_RS07895;old_locus_tag=CCO56_07895 NZ_NPMB01000003.1 Protein Homology CDS 297342 298310 . + 0 ID=cds-WP_000934949.1;Parent=gene-CCO56_RS07895;Dbxref=GenBank:WP_000934949.1;Name=WP_000934949.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=CCO56_RS07895;product=archaetidylserine decarboxylase;protein_id=WP_000934949.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 298329 301655 . + . ID=gene-CCO56_RS07900;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=CCO56_RS07900;old_locus_tag=CCO56_07900 NZ_NPMB01000003.1 Protein Homology CDS 298329 301655 . + 0 ID=cds-WP_001236749.1;Parent=gene-CCO56_RS07900;Dbxref=GenBank:WP_001236749.1;Name=WP_001236749.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=CCO56_RS07900;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236749.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 301717 303219 . - . ID=gene-CCO56_RS07905;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=CCO56_RS07905;old_locus_tag=CCO56_07905 NZ_NPMB01000003.1 Protein Homology CDS 301717 303219 . - 0 ID=cds-WP_000149872.1;Parent=gene-CCO56_RS07905;Dbxref=GenBank:WP_000149872.1;Name=WP_000149872.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=CCO56_RS07905;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149872.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 303445 304422 . - . ID=gene-CCO56_RS07910;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=CCO56_RS07910;old_locus_tag=CCO56_07910 NZ_NPMB01000003.1 Protein Homology CDS 303445 304422 . - 0 ID=cds-WP_000004797.1;Parent=gene-CCO56_RS07910;Dbxref=GenBank:WP_000004797.1;Name=WP_000004797.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=CCO56_RS07910;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004797.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 304745 306535 . + . ID=gene-CCO56_RS07915;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=CCO56_RS07915;old_locus_tag=CCO56_07915 NZ_NPMB01000003.1 Protein Homology CDS 304745 306535 . + 0 ID=cds-WP_001192952.1;Parent=gene-CCO56_RS07915;Dbxref=GenBank:WP_001192952.1;Name=WP_001192952.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=CCO56_RS07915;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192952.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 306528 307262 . + . ID=gene-CCO56_RS07920;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=CCO56_RS07920;old_locus_tag=CCO56_07920 NZ_NPMB01000003.1 Protein Homology CDS 306528 307262 . + 0 ID=cds-WP_000829509.1;Parent=gene-CCO56_RS07920;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=CCO56_RS07920;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 307273 307668 . + . ID=gene-CCO56_RS07925;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=CCO56_RS07925;old_locus_tag=CCO56_07925 NZ_NPMB01000003.1 Protein Homology CDS 307273 307668 . + 0 ID=cds-WP_000208749.1;Parent=gene-CCO56_RS07925;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=CCO56_RS07925;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 307679 308038 . + . ID=gene-CCO56_RS07930;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=CCO56_RS07930;old_locus_tag=CCO56_07930 NZ_NPMB01000003.1 Protein Homology CDS 307679 308038 . + 0 ID=cds-WP_000609650.1;Parent=gene-CCO56_RS07930;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=CCO56_RS07930;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 308149 308682 . + . ID=gene-CCO56_RS07935;Name=CCO56_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07935;old_locus_tag=CCO56_07935 NZ_NPMB01000003.1 Protein Homology CDS 308149 308682 . + 0 ID=cds-WP_001221670.1;Parent=gene-CCO56_RS07935;Dbxref=GenBank:WP_001221670.1;Name=WP_001221670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=CCO56_RS07935;product=lipocalin family protein;protein_id=WP_001221670.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 308699 309016 . - . ID=gene-CCO56_RS07940;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=CCO56_RS07940;old_locus_tag=CCO56_07940 NZ_NPMB01000003.1 Protein Homology CDS 308699 309016 . - 0 ID=cds-WP_000118469.1;Parent=gene-CCO56_RS07940;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=CCO56_RS07940;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 309273 309860 . + . ID=gene-CCO56_RS07945;Name=CCO56_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07945;old_locus_tag=CCO56_07945 NZ_NPMB01000003.1 Protein Homology CDS 309273 309860 . + 0 ID=cds-WP_000912959.1;Parent=gene-CCO56_RS07945;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=CCO56_RS07945;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 309891 310037 . - . ID=gene-CCO56_RS07950;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=CCO56_RS07950;old_locus_tag=CCO56_07950 NZ_NPMB01000003.1 Protein Homology CDS 309891 310037 . - 0 ID=cds-WP_000239598.1;Parent=gene-CCO56_RS07950;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=CCO56_RS07950;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 310145 310279 . - . ID=gene-CCO56_RS07955;Name=CCO56_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07955;old_locus_tag=CCO56_07955 NZ_NPMB01000003.1 Protein Homology CDS 310145 310279 . - 0 ID=cds-WP_000977687.1;Parent=gene-CCO56_RS07955;Dbxref=GenBank:WP_000977687.1;Name=WP_000977687.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=CCO56_RS07955;product=entericidin A/B family lipoprotein;protein_id=WP_000977687.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 310340 310906 . - . ID=gene-CCO56_RS07960;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CCO56_RS07960;old_locus_tag=CCO56_07960 NZ_NPMB01000003.1 Protein Homology CDS 310340 310906 . - 0 ID=cds-WP_000257282.1;Parent=gene-CCO56_RS07960;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=CCO56_RS07960;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 310947 311975 . + . ID=gene-CCO56_RS07965;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=CCO56_RS07965;old_locus_tag=CCO56_07965 NZ_NPMB01000003.1 Protein Homology CDS 310947 311975 . + 0 ID=cds-WP_000940477.1;Parent=gene-CCO56_RS07965;Dbxref=GenBank:WP_000940477.1;Name=WP_000940477.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=CCO56_RS07965;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940477.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 312257 313114 . + . ID=gene-CCO56_RS07970;Name=CCO56_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07970;old_locus_tag=CCO56_07970 NZ_NPMB01000003.1 Protein Homology CDS 312257 313114 . + 0 ID=cds-WP_023229105.1;Parent=gene-CCO56_RS07970;Dbxref=GenBank:WP_023229105.1;Name=WP_023229105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=CCO56_RS07970;product=YjeJ family protein;protein_id=WP_023229105.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 313162 313515 . - . ID=gene-CCO56_RS07975;Name=CCO56_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07975;old_locus_tag=CCO56_07975 NZ_NPMB01000003.1 Protein Homology CDS 313162 313515 . - 0 ID=cds-WP_000558210.1;Parent=gene-CCO56_RS07975;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=CCO56_RS07975;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 313759 315405 . - . ID=gene-CCO56_RS07980;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CCO56_RS07980;old_locus_tag=CCO56_07980 NZ_NPMB01000003.1 Protein Homology CDS 313759 315405 . - 0 ID=cds-WP_000729126.1;Parent=gene-CCO56_RS07980;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=CCO56_RS07980;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 315449 315742 . - . ID=gene-CCO56_RS07985;Name=CCO56_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07985;old_locus_tag=CCO56_07985 NZ_NPMB01000003.1 Protein Homology CDS 315449 315742 . - 0 ID=cds-WP_000027827.1;Parent=gene-CCO56_RS07985;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=CCO56_RS07985;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 316018 317259 . + . ID=gene-CCO56_RS07990;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=CCO56_RS07990;old_locus_tag=CCO56_07990 NZ_NPMB01000003.1 Protein Homology CDS 316018 317259 . + 0 ID=cds-WP_023136358.1;Parent=gene-CCO56_RS07990;Dbxref=GenBank:WP_023136358.1;Name=WP_023136358.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=CCO56_RS07990;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_023136358.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 317318 317794 . - . ID=gene-CCO56_RS07995;Name=CCO56_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS07995;old_locus_tag=CCO56_07995 NZ_NPMB01000003.1 Protein Homology CDS 317318 317794 . - 0 ID=cds-WP_001267291.1;Parent=gene-CCO56_RS07995;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=CCO56_RS07995;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 318135 319571 . + . ID=gene-CCO56_RS08000;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=CCO56_RS08000;old_locus_tag=CCO56_08000 NZ_NPMB01000003.1 Protein Homology CDS 318135 319571 . + 0 ID=cds-WP_000069440.1;Parent=gene-CCO56_RS08000;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=CCO56_RS08000;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 319686 320987 . + . ID=gene-CCO56_RS08005;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=CCO56_RS08005;old_locus_tag=CCO56_08005 NZ_NPMB01000003.1 Protein Homology CDS 319686 320987 . + 0 ID=cds-WP_000637595.1;Parent=gene-CCO56_RS08005;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=CCO56_RS08005;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 321108 321455 . + . ID=gene-CCO56_RS08010;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=CCO56_RS08010;old_locus_tag=CCO56_08010 NZ_NPMB01000003.1 Protein Homology CDS 321108 321455 . + 0 ID=cds-WP_000887832.1;Parent=gene-CCO56_RS08010;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=CCO56_RS08010;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 321431 323134 . + . ID=gene-CCO56_RS08015;Name=CCO56_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08015;old_locus_tag=CCO56_08015 NZ_NPMB01000003.1 Protein Homology CDS 321431 323134 . + 0 ID=cds-WP_000068895.1;Parent=gene-CCO56_RS08015;Dbxref=GenBank:WP_000068895.1;Name=WP_000068895.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=CCO56_RS08015;product=protein-disulfide reductase DsbD;protein_id=WP_000068895.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 323171 323746 . + . ID=gene-CCO56_RS08020;Name=CCO56_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08020;old_locus_tag=CCO56_08020 NZ_NPMB01000003.1 Protein Homology CDS 323171 323746 . + 0 ID=cds-WP_001188511.1;Parent=gene-CCO56_RS08020;Dbxref=GenBank:WP_001188511.1;Name=WP_001188511.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=CCO56_RS08020;product=transcriptional regulator;protein_id=WP_001188511.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 323863 323938 . + . ID=gene-CCO56_RS08025;Name=CCO56_RS08025;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS08025;old_locus_tag=CCO56_08025 NZ_NPMB01000003.1 tRNAscan-SE tRNA 323863 323938 . + . ID=rna-CCO56_RS08025;Parent=gene-CCO56_RS08025;anticodon=(pos:323896..323898);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS08025;product=tRNA-Phe NZ_NPMB01000003.1 tRNAscan-SE exon 323863 323938 . + . ID=exon-CCO56_RS08025-1;Parent=rna-CCO56_RS08025;anticodon=(pos:323896..323898);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS08025;product=tRNA-Phe NZ_NPMB01000003.1 RefSeq gene 324018 324077 . - . ID=gene-CCO56_RS24125;Name=CCO56_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24125;old_locus_tag=CCO56_08030 NZ_NPMB01000003.1 Protein Homology CDS 324018 324077 . - 0 ID=cds-WP_071527099.1;Parent=gene-CCO56_RS24125;Dbxref=GenBank:WP_071527099.1;Name=WP_071527099.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025073.6;locus_tag=CCO56_RS24125;product=helix-turn-helix domain-containing protein;protein_id=WP_071527099.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 324649 325401 . + . ID=gene-CCO56_RS08035;Name=CCO56_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08035;old_locus_tag=CCO56_08035 NZ_NPMB01000003.1 Protein Homology CDS 324649 325401 . + 0 ID=cds-WP_000842407.1;Parent=gene-CCO56_RS08035;Dbxref=GenBank:WP_000842407.1;Name=WP_000842407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=CCO56_RS08035;product=non-specific acid phosphatase;protein_id=WP_000842407.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 325685 326176 . - . ID=gene-CCO56_RS08040;Name=CCO56_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08040;old_locus_tag=CCO56_08040 NZ_NPMB01000003.1 Protein Homology CDS 325685 326176 . - 0 ID=cds-WP_001609688.1;Parent=gene-CCO56_RS08040;Dbxref=GenBank:WP_001609688.1;Name=WP_001609688.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=CCO56_RS08040;product=GNAT family N-acetyltransferase;protein_id=WP_001609688.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 326173 326466 . - . ID=gene-CCO56_RS08045;Name=CCO56_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08045;old_locus_tag=CCO56_08045 NZ_NPMB01000003.1 Protein Homology CDS 326173 326466 . - 0 ID=cds-WP_001110453.1;Parent=gene-CCO56_RS08045;Dbxref=GenBank:WP_001110453.1;Name=WP_001110453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=CCO56_RS08045;product=DUF1778 domain-containing protein;protein_id=WP_001110453.1;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 326784 327006 . + . ID=gene-CCO56_RS23755;Name=CCO56_RS23755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23755;pseudo=true NZ_NPMB01000003.1 Protein Homology CDS 326784 327006 . + 0 ID=cds-CCO56_RS23755;Parent=gene-CCO56_RS23755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=CCO56_RS23755;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 327270 328145 . + . ID=gene-CCO56_RS08050;Name=CCO56_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08050;old_locus_tag=CCO56_08050 NZ_NPMB01000003.1 Protein Homology CDS 327270 328145 . + 0 ID=cds-WP_000921676.1;Parent=gene-CCO56_RS08050;Dbxref=GenBank:WP_000921676.1;Name=WP_000921676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=CCO56_RS08050;product=AraC family transcriptional regulator;protein_id=WP_000921676.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 328142 328429 . + . ID=gene-CCO56_RS08055;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=CCO56_RS08055;old_locus_tag=CCO56_08055 NZ_NPMB01000003.1 Protein Homology CDS 328142 328429 . + 0 ID=cds-WP_001269916.1;Parent=gene-CCO56_RS08055;Dbxref=GenBank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=CCO56_RS08055;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 328422 328604 . - . ID=gene-CCO56_RS23760;Name=CCO56_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23760;old_locus_tag=CCO56_08060 NZ_NPMB01000003.1 Protein Homology CDS 328422 328604 . - 0 ID=cds-WP_001527266.1;Parent=gene-CCO56_RS23760;Dbxref=GenBank:WP_001527266.1;Name=WP_001527266.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=CCO56_RS23760;product=ATP-binding cassette domain-containing protein;protein_id=WP_001527266.1;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 328624 328723 . + . ID=gene-CCO56_RS23765;Name=CCO56_RS23765;end_range=328723,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23765;partial=true;pseudo=true NZ_NPMB01000003.1 Protein Homology CDS 328624 328723 . + 0 ID=cds-CCO56_RS23765;Parent=gene-CCO56_RS23765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=328723,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=CCO56_RS23765;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 328834 328968 . + . ID=gene-CCO56_RS23770;Name=CCO56_RS23770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23770;partial=true;pseudo=true;start_range=.,328834 NZ_NPMB01000003.1 Protein Homology CDS 328834 328968 . + 0 ID=cds-CCO56_RS23770;Parent=gene-CCO56_RS23770;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=CCO56_RS23770;partial=true;product=hypothetical protein;pseudo=true;start_range=.,328834;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 329263 330168 . - . ID=gene-CCO56_RS08070;Name=CCO56_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08070;old_locus_tag=CCO56_08070 NZ_NPMB01000003.1 Protein Homology CDS 329263 330168 . - 0 ID=cds-WP_001268209.1;Parent=gene-CCO56_RS08070;Dbxref=GenBank:WP_001268209.1;Name=WP_001268209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=CCO56_RS08070;product=SdiA-regulated domain-containing protein;protein_id=WP_001268209.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 330472 331872 . + . ID=gene-CCO56_RS08075;Name=CCO56_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08075;old_locus_tag=CCO56_08075 NZ_NPMB01000003.1 Protein Homology CDS 330472 331872 . + 0 ID=cds-WP_061377174.1;Parent=gene-CCO56_RS08075;Dbxref=GenBank:WP_061377174.1;Name=WP_061377174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=CCO56_RS08075;product=DUF7594 domain-containing protein;protein_id=WP_061377174.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 331956 332549 . - . ID=gene-CCO56_RS08080;Name=CCO56_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08080;old_locus_tag=CCO56_08080 NZ_NPMB01000003.1 Protein Homology CDS 331956 332549 . - 0 ID=cds-WP_001542855.1;Parent=gene-CCO56_RS08080;Dbxref=GenBank:WP_001542855.1;Name=WP_001542855.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=CCO56_RS08080;product=TorD/DmsD family molecular chaperone;protein_id=WP_001542855.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 332625 333398 . - . ID=gene-CCO56_RS08085;Name=CCO56_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08085;old_locus_tag=CCO56_08085 NZ_NPMB01000003.1 Protein Homology CDS 332625 333398 . - 0 ID=cds-WP_061377175.1;Parent=gene-CCO56_RS08085;Dbxref=GenBank:WP_061377175.1;Name=WP_061377175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=CCO56_RS08085;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_061377175.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 333391 334017 . - . ID=gene-CCO56_RS08090;Name=CCO56_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08090;old_locus_tag=CCO56_08090 NZ_NPMB01000003.1 Protein Homology CDS 333391 334017 . - 0 ID=cds-WP_000816143.1;Parent=gene-CCO56_RS08090;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=CCO56_RS08090;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 334031 336460 . - . ID=gene-CCO56_RS08095;Name=CCO56_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08095;old_locus_tag=CCO56_08095 NZ_NPMB01000003.1 Protein Homology CDS 334031 336460 . - 0 ID=cds-WP_061377955.1;Parent=gene-CCO56_RS08095;Dbxref=GenBank:WP_061377955.1;Name=WP_061377955.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=CCO56_RS08095;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_061377955.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 336835 338466 . + . ID=gene-CCO56_RS08100;Name=CCO56_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08100;old_locus_tag=CCO56_08100 NZ_NPMB01000003.1 Protein Homology CDS 336835 338466 . + 0 ID=cds-WP_061377177.1;Parent=gene-CCO56_RS08100;Dbxref=GenBank:WP_061377177.1;Name=WP_061377177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=CCO56_RS08100;product=sensor histidine kinase;protein_id=WP_061377177.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 338463 339182 . + . ID=gene-CCO56_RS08105;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=CCO56_RS08105;old_locus_tag=CCO56_08105 NZ_NPMB01000003.1 Protein Homology CDS 338463 339182 . + 0 ID=cds-WP_000611307.1;Parent=gene-CCO56_RS08105;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=CCO56_RS08105;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 339499 339765 . + . ID=gene-CCO56_RS08110;Name=CCO56_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08110;old_locus_tag=CCO56_08110 NZ_NPMB01000003.1 Protein Homology CDS 339499 339765 . + 0 ID=cds-WP_001530565.1;Parent=gene-CCO56_RS08110;Dbxref=GenBank:WP_001530565.1;Name=WP_001530565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=CCO56_RS08110;product=hypothetical protein;protein_id=WP_001530565.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 339912 341252 . + . ID=gene-CCO56_RS08115;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=CCO56_RS08115;old_locus_tag=CCO56_08115 NZ_NPMB01000003.1 Protein Homology CDS 339912 341252 . + 0 ID=cds-WP_000899149.1;Parent=gene-CCO56_RS08115;Dbxref=GenBank:WP_000899149.1;Name=WP_000899149.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=CCO56_RS08115;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899149.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 341348 342994 . + . ID=gene-CCO56_RS08120;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=CCO56_RS08120;old_locus_tag=CCO56_08120 NZ_NPMB01000003.1 Protein Homology CDS 341348 342994 . + 0 ID=cds-WP_000037190.1;Parent=gene-CCO56_RS08120;Dbxref=GenBank:WP_000037190.1;Name=WP_000037190.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=CCO56_RS08120;product=class I fumarate hydratase FumA;protein_id=WP_000037190.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 343083 344513 . - . ID=gene-CCO56_RS08125;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CCO56_RS08125;old_locus_tag=CCO56_08125 NZ_NPMB01000003.1 Protein Homology CDS 343083 344513 . - 0 ID=cds-WP_000028070.1;Parent=gene-CCO56_RS08125;Dbxref=GenBank:WP_000028070.1;Name=WP_000028070.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=CCO56_RS08125;product=melibiose:sodium transporter MelB;protein_id=WP_000028070.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 344597 345952 . - . ID=gene-CCO56_RS08130;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=CCO56_RS08130;old_locus_tag=CCO56_08130 NZ_NPMB01000003.1 Protein Homology CDS 344597 345952 . - 0 ID=cds-WP_001527488.1;Parent=gene-CCO56_RS08130;Dbxref=GenBank:WP_001527488.1;Name=WP_001527488.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=CCO56_RS08130;product=alpha-galactosidase;protein_id=WP_001527488.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 346221 347153 . + . ID=gene-CCO56_RS08135;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=CCO56_RS08135;old_locus_tag=CCO56_08135 NZ_NPMB01000003.1 Protein Homology CDS 346221 347153 . + 0 ID=cds-WP_000106992.1;Parent=gene-CCO56_RS08135;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=CCO56_RS08135;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 347386 349653 . + . ID=gene-CCO56_RS08140;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=CCO56_RS08140;old_locus_tag=CCO56_08140 NZ_NPMB01000003.1 Protein Homology CDS 347386 349653 . + 0 ID=cds-WP_001542850.1;Parent=gene-CCO56_RS08140;Dbxref=GenBank:WP_001542850.1;Name=WP_001542850.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=CCO56_RS08140;product=arginine decarboxylase;protein_id=WP_001542850.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 349950 350711 . + . ID=gene-CCO56_RS08145;Name=CCO56_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08145;old_locus_tag=CCO56_08145 NZ_NPMB01000003.1 Protein Homology CDS 349950 350711 . + 0 ID=cds-WP_001217075.1;Parent=gene-CCO56_RS08145;Dbxref=GenBank:WP_001217075.1;Name=WP_001217075.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=CCO56_RS08145;product=AraC family transcriptional regulator;protein_id=WP_001217075.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 350851 352188 . + . ID=gene-CCO56_RS08150;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=CCO56_RS08150;old_locus_tag=CCO56_08150 NZ_NPMB01000003.1 Protein Homology CDS 350851 352188 . + 0 ID=cds-WP_000093130.1;Parent=gene-CCO56_RS08150;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=CCO56_RS08150;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 352322 353965 . + . ID=gene-CCO56_RS08155;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=CCO56_RS08155;old_locus_tag=CCO56_08155 NZ_NPMB01000003.1 Protein Homology CDS 352322 353965 . + 0 ID=cds-WP_000919290.1;Parent=gene-CCO56_RS08155;Dbxref=GenBank:WP_000919290.1;Name=WP_000919290.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=CCO56_RS08155;product=phosphoethanolamine transferase EptA;protein_id=WP_000919290.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 353962 354630 . + . ID=gene-CCO56_RS08160;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=CCO56_RS08160;old_locus_tag=CCO56_08160 NZ_NPMB01000003.1 Protein Homology CDS 353962 354630 . + 0 ID=cds-WP_000697899.1;Parent=gene-CCO56_RS08160;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=CCO56_RS08160;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 354640 355710 . + . ID=gene-CCO56_RS08165;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=CCO56_RS08165;old_locus_tag=CCO56_08165 NZ_NPMB01000003.1 Protein Homology CDS 354640 355710 . + 0 ID=cds-WP_001212189.1;Parent=gene-CCO56_RS08165;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=CCO56_RS08165;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 355718 355807 . - . ID=gene-CCO56_RS08170;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=CCO56_RS08170;old_locus_tag=CCO56_08170 NZ_NPMB01000003.1 Protein Homology CDS 355718 355807 . - 0 ID=cds-WP_000844399.1;Parent=gene-CCO56_RS08170;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=CCO56_RS08170;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 355877 357379 . - . ID=gene-CCO56_RS08175;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=CCO56_RS08175;old_locus_tag=CCO56_08175 NZ_NPMB01000003.1 Protein Homology CDS 355877 357379 . - 0 ID=cds-WP_001609660.1;Parent=gene-CCO56_RS08175;Dbxref=GenBank:WP_001609660.1;Name=WP_001609660.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=CCO56_RS08175;product=glycine betaine/L-proline transporter ProP;protein_id=WP_001609660.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 357847 358182 . + . ID=gene-CCO56_RS08180;Name=CCO56_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08180;old_locus_tag=CCO56_08180 NZ_NPMB01000003.1 Protein Homology CDS 357847 358182 . + 0 ID=cds-WP_000056482.1;Parent=gene-CCO56_RS08180;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=CCO56_RS08180;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 358302 358745 . + . ID=gene-CCO56_RS08185;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=CCO56_RS08185;old_locus_tag=CCO56_08185 NZ_NPMB01000003.1 Protein Homology CDS 358302 358745 . + 0 ID=cds-WP_001131301.1;Parent=gene-CCO56_RS08185;Dbxref=GenBank:WP_001131301.1;Name=WP_001131301.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=CCO56_RS08185;product=VOC family metalloprotein YjdN;protein_id=WP_001131301.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 358897 359331 . + . ID=gene-CCO56_RS08190;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=CCO56_RS08190;old_locus_tag=CCO56_08190 NZ_NPMB01000003.1 Protein Homology CDS 358897 359331 . + 0 ID=cds-WP_001542849.1;Parent=gene-CCO56_RS08190;Dbxref=GenBank:WP_001542849.1;Name=WP_001542849.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=CCO56_RS08190;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001542849.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 359589 360497 . + . ID=gene-CCO56_RS08195;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=CCO56_RS08195;old_locus_tag=CCO56_08195 NZ_NPMB01000003.1 Protein Homology CDS 359589 360497 . + 0 ID=cds-WP_000457029.1;Parent=gene-CCO56_RS08195;Dbxref=GenBank:WP_000457029.1;Name=WP_000457029.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=CCO56_RS08195;product=lipid A hydroxylase LpxO;protein_id=WP_000457029.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 360863 363010 . + . ID=gene-CCO56_RS08200;Name=CCO56_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08200;old_locus_tag=CCO56_08200 NZ_NPMB01000003.1 Protein Homology CDS 360863 363010 . + 0 ID=cds-WP_011233236.1;Parent=gene-CCO56_RS08200;Dbxref=GenBank:WP_011233236.1;Name=WP_011233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=CCO56_RS08200;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_011233236.1;transl_except=(pos:361280..361282%2Caa:Sec);transl_table=11 NZ_NPMB01000003.1 RefSeq gene 363187 363876 . + . ID=gene-CCO56_RS08205;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=CCO56_RS08205;old_locus_tag=CCO56_08205 NZ_NPMB01000003.1 Protein Homology CDS 363187 363876 . + 0 ID=cds-WP_000803307.1;Parent=gene-CCO56_RS08205;Dbxref=GenBank:WP_000803307.1;Name=WP_000803307.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=CCO56_RS08205;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000803307.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 364034 365344 . - . ID=gene-CCO56_RS08210;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=CCO56_RS08210;old_locus_tag=CCO56_08210 NZ_NPMB01000003.1 Protein Homology CDS 364034 365344 . - 0 ID=cds-WP_000793278.1;Parent=gene-CCO56_RS08210;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=CCO56_RS08210;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 365689 366309 . - . ID=gene-CCO56_RS08215;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=CCO56_RS08215;old_locus_tag=CCO56_08215 NZ_NPMB01000003.1 Protein Homology CDS 365689 366309 . - 0 ID=cds-WP_001609647.1;Parent=gene-CCO56_RS08215;Dbxref=GenBank:WP_001609647.1;Name=WP_001609647.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=CCO56_RS08215;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_001609647.1;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 366306 366744 . - . ID=gene-CCO56_RS24130;Name=nrfF;end_range=366744,.;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=CCO56_RS24130;old_locus_tag=CCO56_08220;partial=true;pseudo=true NZ_NPMB01000003.1 Protein Homology CDS 366306 366744 . - 0 ID=cds-CCO56_RS24130;Parent=gene-CCO56_RS24130;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=366744,.;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO56_RS24130;partial=true;product=heme lyase NrfEFG subunit NrfF;pseudo=true;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 366808 368544 . - . ID=gene-CCO56_RS08225;Name=CCO56_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08225;old_locus_tag=CCO56_08225 NZ_NPMB01000003.1 Protein Homology CDS 366808 368544 . - 0 ID=cds-WP_000551711.1;Parent=gene-CCO56_RS08225;Dbxref=GenBank:WP_000551711.1;Name=WP_000551711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507453.1;locus_tag=CCO56_RS08225;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_000551711.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 368537 369493 . - . ID=gene-CCO56_RS08230;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=CCO56_RS08230;old_locus_tag=CCO56_08230 NZ_NPMB01000003.1 Protein Homology CDS 368537 369493 . - 0 ID=cds-WP_000186604.1;Parent=gene-CCO56_RS08230;Dbxref=GenBank:WP_000186604.1;Name=WP_000186604.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=CCO56_RS08230;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000186604.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 369490 370161 . - . ID=gene-CCO56_RS08235;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=CCO56_RS08235;old_locus_tag=CCO56_08235 NZ_NPMB01000003.1 Protein Homology CDS 369490 370161 . - 0 ID=cds-WP_001278026.1;Parent=gene-CCO56_RS08235;Dbxref=GenBank:WP_001278026.1;Name=WP_001278026.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=CCO56_RS08235;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278026.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 370158 370724 . - . ID=gene-CCO56_RS08240;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=CCO56_RS08240;old_locus_tag=CCO56_08240 NZ_NPMB01000003.1 Protein Homology CDS 370158 370724 . - 0 ID=cds-WP_000115063.1;Parent=gene-CCO56_RS08240;Dbxref=GenBank:WP_000115063.1;Name=WP_000115063.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=CCO56_RS08240;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115063.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 370836 372272 . - . ID=gene-CCO56_RS08245;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=CCO56_RS08245;old_locus_tag=CCO56_08245 NZ_NPMB01000003.1 Protein Homology CDS 370836 372272 . - 0 ID=cds-WP_000101775.1;Parent=gene-CCO56_RS08245;Dbxref=GenBank:WP_000101775.1;Name=WP_000101775.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=CCO56_RS08245;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000101775.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 372704 374662 . + . ID=gene-CCO56_RS08255;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=CCO56_RS08255;old_locus_tag=CCO56_08255 NZ_NPMB01000003.1 Protein Homology CDS 372704 374662 . + 0 ID=cds-WP_000083873.1;Parent=gene-CCO56_RS08255;Dbxref=GenBank:WP_000083873.1;Name=WP_000083873.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=CCO56_RS08255;product=acetate--CoA ligase;protein_id=WP_000083873.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 374902 375216 . + . ID=gene-CCO56_RS08260;Name=CCO56_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08260;old_locus_tag=CCO56_08260 NZ_NPMB01000003.1 Protein Homology CDS 374902 375216 . + 0 ID=cds-WP_000999620.1;Parent=gene-CCO56_RS08260;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=CCO56_RS08260;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 375213 376862 . + . ID=gene-CCO56_RS08265;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=CCO56_RS08265;old_locus_tag=CCO56_08265 NZ_NPMB01000003.1 Protein Homology CDS 375213 376862 . + 0 ID=cds-WP_000832536.1;Parent=gene-CCO56_RS08265;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=CCO56_RS08265;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 376901 377590 . - . ID=gene-CCO56_RS08270;Name=CCO56_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08270;old_locus_tag=CCO56_08270 NZ_NPMB01000003.1 Protein Homology CDS 376901 377590 . - 0 ID=cds-WP_001067096.1;Parent=gene-CCO56_RS08270;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=CCO56_RS08270;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 377583 377993 . - . ID=gene-CCO56_RS08275;Name=CCO56_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08275;old_locus_tag=CCO56_08275 NZ_NPMB01000003.1 Protein Homology CDS 377583 377993 . - 0 ID=cds-WP_000257347.1;Parent=gene-CCO56_RS08275;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=CCO56_RS08275;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 378097 378984 . + . ID=gene-CCO56_RS08280;Name=CCO56_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08280;old_locus_tag=CCO56_08280 NZ_NPMB01000003.1 Protein Homology CDS 378097 378984 . + 0 ID=cds-WP_000354962.1;Parent=gene-CCO56_RS08280;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=CCO56_RS08280;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 379079 380725 . - . ID=gene-CCO56_RS08285;Name=CCO56_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08285;old_locus_tag=CCO56_08285 NZ_NPMB01000003.1 Protein Homology CDS 379079 380725 . - 0 ID=cds-WP_001542845.1;Parent=gene-CCO56_RS08285;Dbxref=GenBank:WP_001542845.1;Name=WP_001542845.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=CCO56_RS08285;product=Na+/H+ antiporter;protein_id=WP_001542845.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 380875 382224 . - . ID=gene-CCO56_RS08295;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=CCO56_RS08295;old_locus_tag=CCO56_08295 NZ_NPMB01000003.1 Protein Homology CDS 380875 382224 . - 0 ID=cds-WP_000106907.1;Parent=gene-CCO56_RS08295;Dbxref=GenBank:WP_000106907.1;Name=WP_000106907.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=CCO56_RS08295;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106907.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 382572 383240 . - . ID=gene-CCO56_RS08305;Name=CCO56_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08305;old_locus_tag=CCO56_08305 NZ_NPMB01000003.1 Protein Homology CDS 382572 383240 . - 0 ID=cds-WP_000958575.1;Parent=gene-CCO56_RS08305;Dbxref=GenBank:WP_000958575.1;Name=WP_000958575.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=CCO56_RS08305;product=glutathione S-transferase family protein;protein_id=WP_000958575.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 383533 383991 . - . ID=gene-CCO56_RS08310;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=CCO56_RS08310;old_locus_tag=CCO56_08310 NZ_NPMB01000003.1 Protein Homology CDS 383533 383991 . - 0 ID=cds-WP_000412686.1;Parent=gene-CCO56_RS08310;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=CCO56_RS08310;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 384078 384401 . + . ID=gene-CCO56_RS08315;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=CCO56_RS08315;old_locus_tag=CCO56_08315 NZ_NPMB01000003.1 Protein Homology CDS 384078 384401 . + 0 ID=cds-WP_000019483.1;Parent=gene-CCO56_RS08315;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=CCO56_RS08315;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 384389 385990 . - . ID=gene-CCO56_RS08320;Name=CCO56_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08320;old_locus_tag=CCO56_08320 NZ_NPMB01000003.1 Protein Homology CDS 384389 385990 . - 0 ID=cds-WP_000083655.1;Parent=gene-CCO56_RS08320;Dbxref=GenBank:WP_000083655.1;Name=WP_000083655.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=CCO56_RS08320;product=EAL domain-containing protein;protein_id=WP_000083655.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 386553 386834 . + . ID=gene-CCO56_RS08325;Name=CCO56_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08325;old_locus_tag=CCO56_08325 NZ_NPMB01000003.1 Protein Homology CDS 386553 386834 . + 0 ID=cds-WP_000719058.1;Parent=gene-CCO56_RS08325;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=CCO56_RS08325;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 387112 389178 . - . ID=gene-CCO56_RS08330;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=CCO56_RS08330;old_locus_tag=CCO56_08330 NZ_NPMB01000003.1 Protein Homology CDS 387112 389178 . - 0 ID=cds-WP_000358567.1;Parent=gene-CCO56_RS08330;Dbxref=GenBank:WP_000358567.1;Name=WP_000358567.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=CCO56_RS08330;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358567.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 389218 405903 . - . ID=gene-CCO56_RS08335;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=CCO56_RS08335;old_locus_tag=CCO56_08335 NZ_NPMB01000003.1 Protein Homology CDS 389218 405903 . - 0 ID=cds-WP_094882040.1;Parent=gene-CCO56_RS08335;Dbxref=GenBank:WP_094882040.1;Name=WP_094882040.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO56_RS08335;product=non-fimbrial adhesin SiiE;protein_id=WP_094882040.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 405920 407197 . - . ID=gene-CCO56_RS08340;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=CCO56_RS08340;old_locus_tag=CCO56_08340 NZ_NPMB01000003.1 Protein Homology CDS 405920 407197 . - 0 ID=cds-WP_001081935.1;Parent=gene-CCO56_RS08340;Dbxref=GenBank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=CCO56_RS08340;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 407194 408513 . - . ID=gene-CCO56_RS08345;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=CCO56_RS08345;old_locus_tag=CCO56_08345 NZ_NPMB01000003.1 Protein Homology CDS 407194 408513 . - 0 ID=cds-WP_001670706.1;Parent=gene-CCO56_RS08345;Dbxref=GenBank:WP_001670706.1;Name=WP_001670706.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=CCO56_RS08345;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_001670706.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 408503 409891 . - . ID=gene-CCO56_RS08350;Name=CCO56_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08350;old_locus_tag=CCO56_08350 NZ_NPMB01000003.1 Protein Homology CDS 408503 409891 . - 0 ID=cds-WP_079822260.1;Parent=gene-CCO56_RS08350;Dbxref=GenBank:WP_079822260.1;Name=WP_079822260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=CCO56_RS08350;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_079822260.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 409888 410520 . - . ID=gene-CCO56_RS08355;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=CCO56_RS08355;old_locus_tag=CCO56_08355 NZ_NPMB01000003.1 Protein Homology CDS 409888 410520 . - 0 ID=cds-WP_000389240.1;Parent=gene-CCO56_RS08355;Dbxref=GenBank:WP_000389240.1;Name=WP_000389240.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=CCO56_RS08355;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389240.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 411560 412090 . - . ID=gene-CCO56_RS08365;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=CCO56_RS08365;old_locus_tag=CCO56_08365 NZ_NPMB01000003.1 Protein Homology CDS 411560 412090 . - 0 ID=cds-WP_000168322.1;Parent=gene-CCO56_RS08365;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=CCO56_RS08365;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 412338 415163 . + . ID=gene-CCO56_RS08375;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CCO56_RS08375;old_locus_tag=CCO56_08375 NZ_NPMB01000003.1 Protein Homology CDS 412338 415163 . + 0 ID=cds-WP_000357725.1;Parent=gene-CCO56_RS08375;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=CCO56_RS08375;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 415295 415750 . + . ID=gene-CCO56_RS08380;Name=CCO56_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08380;old_locus_tag=CCO56_08380 NZ_NPMB01000003.1 Protein Homology CDS 415295 415750 . + 0 ID=cds-WP_080177032.1;Parent=gene-CCO56_RS08380;Dbxref=GenBank:WP_080177032.1;Name=WP_080177032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=CCO56_RS08380;product=hypothetical protein;protein_id=WP_080177032.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 415737 416075 . + . ID=gene-CCO56_RS08385;Name=CCO56_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08385;old_locus_tag=CCO56_08385 NZ_NPMB01000003.1 Protein Homology CDS 415737 416075 . + 0 ID=cds-WP_000146586.1;Parent=gene-CCO56_RS08385;Dbxref=GenBank:WP_000146586.1;Name=WP_000146586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=CCO56_RS08385;product=hypothetical protein;protein_id=WP_000146586.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 416076 416432 . - . ID=gene-CCO56_RS08390;Name=CCO56_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08390;old_locus_tag=CCO56_08390 NZ_NPMB01000003.1 Protein Homology CDS 416076 416432 . - 0 ID=cds-WP_000155665.1;Parent=gene-CCO56_RS08390;Dbxref=GenBank:WP_000155665.1;Name=WP_000155665.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=CCO56_RS08390;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155665.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 416435 416851 . - . ID=gene-CCO56_RS08395;Name=CCO56_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08395;old_locus_tag=CCO56_08395 NZ_NPMB01000003.1 Protein Homology CDS 416435 416851 . - 0 ID=cds-WP_000270392.1;Parent=gene-CCO56_RS08395;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=CCO56_RS08395;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 416980 417693 . - . ID=gene-CCO56_RS08400;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=CCO56_RS08400;old_locus_tag=CCO56_08400 NZ_NPMB01000003.1 Protein Homology CDS 416980 417693 . - 0 ID=cds-WP_000724436.1;Parent=gene-CCO56_RS08400;Dbxref=GenBank:WP_000724436.1;Name=WP_000724436.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=CCO56_RS08400;product=acid phosphatase AphA;protein_id=WP_000724436.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 417880 419073 . - . ID=gene-CCO56_RS08405;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=CCO56_RS08405;old_locus_tag=CCO56_08405 NZ_NPMB01000003.1 Protein Homology CDS 417880 419073 . - 0 ID=cds-WP_023212851.1;Parent=gene-CCO56_RS08405;Dbxref=GenBank:WP_023212851.1;Name=WP_023212851.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=CCO56_RS08405;product=aromatic amino acid transaminase;protein_id=WP_023212851.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 419259 420338 . - . ID=gene-CCO56_RS08410;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CCO56_RS08410;old_locus_tag=CCO56_08410 NZ_NPMB01000003.1 Protein Homology CDS 419259 420338 . - 0 ID=cds-WP_001147297.1;Parent=gene-CCO56_RS08410;Dbxref=GenBank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=CCO56_RS08410;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 420370 421785 . - . ID=gene-CCO56_RS08415;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CCO56_RS08415;old_locus_tag=CCO56_08415 NZ_NPMB01000003.1 Protein Homology CDS 420370 421785 . - 0 ID=cds-WP_000918353.1;Parent=gene-CCO56_RS08415;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=CCO56_RS08415;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 421850 422833 . + . ID=gene-CCO56_RS08420;Name=CCO56_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08420;old_locus_tag=CCO56_08420 NZ_NPMB01000003.1 Protein Homology CDS 421850 422833 . + 0 ID=cds-WP_000235555.1;Parent=gene-CCO56_RS08420;Dbxref=GenBank:WP_000235555.1;Name=WP_000235555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=CCO56_RS08420;product=quinone oxidoreductase;protein_id=WP_000235555.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 423008 423250 . - . ID=gene-CCO56_RS08425;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=CCO56_RS08425;old_locus_tag=CCO56_08425 NZ_NPMB01000003.1 Protein Homology CDS 423008 423250 . - 0 ID=cds-WP_000891414.1;Parent=gene-CCO56_RS08425;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=CCO56_RS08425;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 423418 424416 . - . ID=gene-CCO56_RS08430;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=CCO56_RS08430;old_locus_tag=CCO56_08430 NZ_NPMB01000003.1 Protein Homology CDS 423418 424416 . - 0 ID=cds-WP_080177031.1;Parent=gene-CCO56_RS08430;Dbxref=GenBank:WP_080177031.1;Name=WP_080177031.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=CCO56_RS08430;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_080177031.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 424504 425814 . - . ID=gene-CCO56_RS08435;Name=CCO56_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08435;old_locus_tag=CCO56_08435 NZ_NPMB01000003.1 Protein Homology CDS 424504 425814 . - 0 ID=cds-WP_001039335.1;Parent=gene-CCO56_RS08435;Dbxref=GenBank:WP_001039335.1;Name=WP_001039335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=CCO56_RS08435;product=conjugal transfer protein TraF;protein_id=WP_001039335.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 426061 426576 . + . ID=gene-CCO56_RS08440;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=CCO56_RS08440;old_locus_tag=CCO56_08440 NZ_NPMB01000003.1 Protein Homology CDS 426061 426576 . + 0 ID=cds-WP_094882041.1;Parent=gene-CCO56_RS08440;Dbxref=GenBank:WP_094882041.1;Name=WP_094882041.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=CCO56_RS08440;product=zinc uptake transcriptional repressor Zur;protein_id=WP_094882041.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 426676 426885 . - . ID=gene-CCO56_RS08445;Name=CCO56_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08445;old_locus_tag=CCO56_08445 NZ_NPMB01000003.1 Protein Homology CDS 426676 426885 . - 0 ID=cds-WP_001030592.1;Parent=gene-CCO56_RS08445;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=CCO56_RS08445;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 426907 427020 . - . ID=gene-CCO56_RS08450;Name=CCO56_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08450;old_locus_tag=CCO56_08450 NZ_NPMB01000003.1 Protein Homology CDS 426907 427020 . - 0 ID=cds-WP_010989093.1;Parent=gene-CCO56_RS08450;Dbxref=GenBank:WP_010989093.1;Name=WP_010989093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=CCO56_RS08450;product=hypothetical protein;protein_id=WP_010989093.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 427017 428342 . - . ID=gene-CCO56_RS08455;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=CCO56_RS08455;old_locus_tag=CCO56_08455 NZ_NPMB01000003.1 Protein Homology CDS 427017 428342 . - 0 ID=cds-WP_023229434.1;Parent=gene-CCO56_RS08455;Dbxref=GenBank:WP_023229434.1;Name=WP_023229434.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=CCO56_RS08455;product=MATE family efflux transporter DinF;protein_id=WP_023229434.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 428521 429129 . - . ID=gene-CCO56_RS08460;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CCO56_RS08460;old_locus_tag=CCO56_08460 NZ_NPMB01000003.1 Protein Homology CDS 428521 429129 . - 0 ID=cds-WP_000646079.1;Parent=gene-CCO56_RS08460;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=CCO56_RS08460;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 429238 429606 . - . ID=gene-CCO56_RS08465;Name=CCO56_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08465;old_locus_tag=CCO56_08465 NZ_NPMB01000003.1 Protein Homology CDS 429238 429606 . - 0 ID=cds-WP_000002900.1;Parent=gene-CCO56_RS08465;Dbxref=GenBank:WP_000002900.1;Name=WP_000002900.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=CCO56_RS08465;product=diacylglycerol kinase;protein_id=WP_000002900.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 429777 432197 . + . ID=gene-CCO56_RS08470;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=CCO56_RS08470;old_locus_tag=CCO56_08470 NZ_NPMB01000003.1 Protein Homology CDS 429777 432197 . + 0 ID=cds-WP_015406182.1;Parent=gene-CCO56_RS08470;Dbxref=GenBank:WP_015406182.1;Name=WP_015406182.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=CCO56_RS08470;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_015406182.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 432296 433168 . - . ID=gene-CCO56_RS08475;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=CCO56_RS08475;old_locus_tag=CCO56_08475 NZ_NPMB01000003.1 Protein Homology CDS 432296 433168 . - 0 ID=cds-WP_000455249.1;Parent=gene-CCO56_RS08475;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=CCO56_RS08475;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 433182 433679 . - . ID=gene-CCO56_RS08480;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=CCO56_RS08480;old_locus_tag=CCO56_08480 NZ_NPMB01000003.1 Protein Homology CDS 433182 433679 . - 0 ID=cds-WP_000019217.1;Parent=gene-CCO56_RS08480;Dbxref=GenBank:WP_000019217.1;Name=WP_000019217.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=CCO56_RS08480;product=chorismate lyase;protein_id=WP_000019217.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 433860 434777 . - . ID=gene-CCO56_RS08485;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=CCO56_RS08485;old_locus_tag=CCO56_08485 NZ_NPMB01000003.1 Protein Homology CDS 433860 434777 . - 0 ID=cds-WP_000782497.1;Parent=gene-CCO56_RS08485;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=CCO56_RS08485;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 434941 436299 . - . ID=gene-CCO56_RS08490;Name=CCO56_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08490;old_locus_tag=CCO56_08490 NZ_NPMB01000003.1 Protein Homology CDS 434941 436299 . - 0 ID=cds-WP_000973678.1;Parent=gene-CCO56_RS08490;Dbxref=GenBank:WP_000973678.1;Name=WP_000973678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=CCO56_RS08490;product=maltoporin;protein_id=WP_000973678.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 436388 437497 . - . ID=gene-CCO56_RS08495;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=CCO56_RS08495;old_locus_tag=CCO56_08495 NZ_NPMB01000003.1 Protein Homology CDS 436388 437497 . - 0 ID=cds-WP_000179176.1;Parent=gene-CCO56_RS08495;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=CCO56_RS08495;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 437859 439049 . + . ID=gene-CCO56_RS08500;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=CCO56_RS08500;old_locus_tag=CCO56_08500 NZ_NPMB01000003.1 Protein Homology CDS 437859 439049 . + 0 ID=cds-WP_000695415.1;Parent=gene-CCO56_RS08500;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=CCO56_RS08500;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_NPMB01000003.1 RefSeq pseudogene 438998 439138 . - . ID=gene-CCO56_RS24135;Name=CCO56_RS24135;end_range=439138,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24135;partial=true;pseudo=true NZ_NPMB01000003.1 Protein Homology CDS 438998 439138 . - 0 ID=cds-CCO56_RS24135;Parent=gene-CCO56_RS24135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=439138,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO56_RS24135;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 439181 440725 . + . ID=gene-CCO56_RS08505;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=CCO56_RS08505;old_locus_tag=CCO56_08505 NZ_NPMB01000003.1 Protein Homology CDS 439181 440725 . + 0 ID=cds-WP_000382573.1;Parent=gene-CCO56_RS08505;Dbxref=GenBank:WP_000382573.1;Name=WP_000382573.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=CCO56_RS08505;product=maltose ABC transporter permease MalF;protein_id=WP_000382573.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 440740 441630 . + . ID=gene-CCO56_RS08510;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=CCO56_RS08510;old_locus_tag=CCO56_08510 NZ_NPMB01000003.1 Protein Homology CDS 440740 441630 . + 0 ID=cds-WP_001252081.1;Parent=gene-CCO56_RS08510;Dbxref=GenBank:WP_001252081.1;Name=WP_001252081.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=CCO56_RS08510;product=maltose ABC transporter permease MalG;protein_id=WP_001252081.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 441950 443425 . + . ID=gene-CCO56_RS08515;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=CCO56_RS08515;old_locus_tag=CCO56_08515 NZ_NPMB01000003.1 Protein Homology CDS 441950 443425 . + 0 ID=cds-WP_001091898.1;Parent=gene-CCO56_RS08515;Dbxref=GenBank:WP_001091898.1;Name=WP_001091898.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031675.1;locus_tag=CCO56_RS08515;product=D-xylose transporter XylE;protein_id=WP_001091898.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 443471 443881 . - . ID=gene-CCO56_RS08520;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=CCO56_RS08520;old_locus_tag=CCO56_08520 NZ_NPMB01000003.1 Protein Homology CDS 443471 443881 . - 0 ID=cds-WP_000982752.1;Parent=gene-CCO56_RS08520;Dbxref=GenBank:WP_000982752.1;Name=WP_000982752.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=CCO56_RS08520;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982752.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 444024 446120 . - . ID=gene-CCO56_RS08525;Name=CCO56_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08525;old_locus_tag=CCO56_08525 NZ_NPMB01000003.1 Protein Homology CDS 444024 446120 . - 0 ID=cds-WP_000750788.1;Parent=gene-CCO56_RS08525;Dbxref=GenBank:WP_000750788.1;Name=WP_000750788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=CCO56_RS08525;product=YjbH domain-containing protein;protein_id=WP_000750788.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 446120 446857 . - . ID=gene-CCO56_RS08530;Name=CCO56_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08530;old_locus_tag=CCO56_08530 NZ_NPMB01000003.1 Protein Homology CDS 446120 446857 . - 0 ID=cds-WP_000977974.1;Parent=gene-CCO56_RS08530;Dbxref=GenBank:WP_000977974.1;Name=WP_000977974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=CCO56_RS08530;product=capsule biosynthesis GfcC family protein;protein_id=WP_000977974.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 446854 447492 . - . ID=gene-CCO56_RS08535;Name=CCO56_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08535;old_locus_tag=CCO56_08535 NZ_NPMB01000003.1 Protein Homology CDS 446854 447492 . - 0 ID=cds-WP_000824809.1;Parent=gene-CCO56_RS08535;Dbxref=GenBank:WP_000824809.1;Name=WP_000824809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=CCO56_RS08535;product=YjbF family lipoprotein;protein_id=WP_000824809.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 447556 447798 . - . ID=gene-CCO56_RS08540;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=CCO56_RS08540;old_locus_tag=CCO56_08540 NZ_NPMB01000003.1 Protein Homology CDS 447556 447798 . - 0 ID=cds-WP_001541297.1;Parent=gene-CCO56_RS08540;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=CCO56_RS08540;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 448242 449891 . - . ID=gene-CCO56_RS08545;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=CCO56_RS08545;old_locus_tag=CCO56_08545 NZ_NPMB01000003.1 Protein Homology CDS 448242 449891 . - 0 ID=cds-WP_000790032.1;Parent=gene-CCO56_RS08545;Dbxref=GenBank:WP_000790032.1;Name=WP_000790032.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=CCO56_RS08545;product=glucose-6-phosphate isomerase;protein_id=WP_000790032.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 450279 451628 . + . ID=gene-CCO56_RS08550;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO56_RS08550;old_locus_tag=CCO56_08550 NZ_NPMB01000003.1 Protein Homology CDS 450279 451628 . + 0 ID=cds-WP_000136392.1;Parent=gene-CCO56_RS08550;Dbxref=GenBank:WP_000136392.1;Name=WP_000136392.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=CCO56_RS08550;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136392.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 452005 453594 . + . ID=gene-CCO56_RS08560;Name=CCO56_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08560;old_locus_tag=CCO56_08560 NZ_NPMB01000003.1 Protein Homology CDS 452005 453594 . + 0 ID=cds-WP_000716846.1;Parent=gene-CCO56_RS08560;Dbxref=GenBank:WP_000716846.1;Name=WP_000716846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=CCO56_RS08560;product=PTS sugar transporter;protein_id=WP_000716846.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 453618 454457 . + . ID=gene-CCO56_RS08565;Name=CCO56_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08565;old_locus_tag=CCO56_08565 NZ_NPMB01000003.1 Protein Homology CDS 453618 454457 . + 0 ID=cds-WP_000472329.1;Parent=gene-CCO56_RS08565;Dbxref=GenBank:WP_000472329.1;Name=WP_000472329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=CCO56_RS08565;product=hypothetical protein;protein_id=WP_000472329.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 454474 455337 . + . ID=gene-CCO56_RS08570;Name=CCO56_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08570;old_locus_tag=CCO56_08570 NZ_NPMB01000003.1 Protein Homology CDS 454474 455337 . + 0 ID=cds-WP_001609562.1;Parent=gene-CCO56_RS08570;Dbxref=GenBank:WP_001609562.1;Name=WP_001609562.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=CCO56_RS08570;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_001609562.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 455324 456082 . + . ID=gene-CCO56_RS08575;Name=CCO56_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08575;old_locus_tag=CCO56_08575 NZ_NPMB01000003.1 Protein Homology CDS 455324 456082 . + 0 ID=cds-WP_001068171.1;Parent=gene-CCO56_RS08575;Dbxref=GenBank:WP_001068171.1;Name=WP_001068171.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=CCO56_RS08575;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001068171.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 456293 456565 . + . ID=gene-CCO56_RS08585;Name=CCO56_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08585;old_locus_tag=CCO56_08585 NZ_NPMB01000003.1 Protein Homology CDS 456293 456565 . + 0 ID=cds-WP_001207628.1;Parent=gene-CCO56_RS08585;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=CCO56_RS08585;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 456562 457431 . - . ID=gene-CCO56_RS08590;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=CCO56_RS08590;old_locus_tag=CCO56_08590 NZ_NPMB01000003.1 Protein Homology CDS 456562 457431 . - 0 ID=cds-WP_023215117.1;Parent=gene-CCO56_RS08590;Dbxref=GenBank:WP_023215117.1;Name=WP_023215117.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=CCO56_RS08590;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_023215117.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 457478 458017 . - . ID=gene-CCO56_RS08595;Name=CCO56_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08595;old_locus_tag=CCO56_08595 NZ_NPMB01000003.1 Protein Homology CDS 457478 458017 . - 0 ID=cds-WP_001096724.1;Parent=gene-CCO56_RS08595;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=CCO56_RS08595;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 458052 458153 . - . ID=gene-CCO56_RS08600;Name=CCO56_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08600;old_locus_tag=CCO56_08600 NZ_NPMB01000003.1 Protein Homology CDS 458052 458153 . - 0 ID=cds-WP_001541281.1;Parent=gene-CCO56_RS08600;Dbxref=GenBank:WP_001541281.1;Name=WP_001541281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=CCO56_RS08600;product=hypothetical protein;protein_id=WP_001541281.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 458225 458914 . + . ID=gene-CCO56_RS08605;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=CCO56_RS08605;old_locus_tag=CCO56_08605 NZ_NPMB01000003.1 Protein Homology CDS 458225 458914 . + 0 ID=cds-WP_000421776.1;Parent=gene-CCO56_RS08605;Dbxref=GenBank:WP_000421776.1;Name=WP_000421776.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=CCO56_RS08605;product=dipeptidase PepE;protein_id=WP_000421776.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 458989 460620 . - . ID=gene-CCO56_RS08610;Name=CCO56_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08610;old_locus_tag=CCO56_08610 NZ_NPMB01000003.1 Protein Homology CDS 458989 460620 . - 0 ID=cds-WP_000956811.1;Parent=gene-CCO56_RS08610;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=CCO56_RS08610;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 460887 464570 . - . ID=gene-CCO56_RS08615;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=CCO56_RS08615;old_locus_tag=CCO56_08615 NZ_NPMB01000003.1 Protein Homology CDS 460887 464570 . - 0 ID=cds-WP_023207382.1;Parent=gene-CCO56_RS08615;Dbxref=GenBank:WP_023207382.1;Name=WP_023207382.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=CCO56_RS08615;product=methionine synthase;protein_id=WP_023207382.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 464877 465701 . + . ID=gene-CCO56_RS08620;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=CCO56_RS08620;old_locus_tag=CCO56_08620 NZ_NPMB01000003.1 Protein Homology CDS 464877 465701 . + 0 ID=cds-WP_000226434.1;Parent=gene-CCO56_RS08620;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=CCO56_RS08620;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 465712 466119 . + . ID=gene-CCO56_RS08625;Name=CCO56_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08625;old_locus_tag=CCO56_08625 NZ_NPMB01000003.1 Protein Homology CDS 465712 466119 . + 0 ID=cds-WP_010989091.1;Parent=gene-CCO56_RS08625;Dbxref=GenBank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=CCO56_RS08625;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 466083 467834 . - . ID=gene-CCO56_RS08630;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=CCO56_RS08630;old_locus_tag=CCO56_08630 NZ_NPMB01000003.1 Protein Homology CDS 466083 467834 . - 0 ID=cds-WP_001137277.1;Parent=gene-CCO56_RS08630;Dbxref=GenBank:WP_001137277.1;Name=WP_001137277.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=CCO56_RS08630;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137277.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 467936 469240 . - . ID=gene-CCO56_RS08635;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=CCO56_RS08635;old_locus_tag=CCO56_08635 NZ_NPMB01000003.1 Protein Homology CDS 467936 469240 . - 0 ID=cds-WP_023137003.1;Parent=gene-CCO56_RS08635;Dbxref=GenBank:WP_023137003.1;Name=WP_023137003.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=CCO56_RS08635;product=isocitrate lyase;protein_id=WP_023137003.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 469272 470873 . - . ID=gene-CCO56_RS08640;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=CCO56_RS08640;old_locus_tag=CCO56_08640 NZ_NPMB01000003.1 Protein Homology CDS 469272 470873 . - 0 ID=cds-WP_001069371.1;Parent=gene-CCO56_RS08640;Dbxref=GenBank:WP_001069371.1;Name=WP_001069371.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=CCO56_RS08640;product=malate synthase A;protein_id=WP_001069371.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 471142 472071 . - . ID=gene-CCO56_RS08645;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=CCO56_RS08645;old_locus_tag=CCO56_08645 NZ_NPMB01000003.1 Protein Homology CDS 471142 472071 . - 0 ID=cds-WP_001122767.1;Parent=gene-CCO56_RS08645;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=CCO56_RS08645;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11 NZ_NPMB01000003.1 RefSeq gene 472228 472665 . + . ID=gene-CCO56_RS08650;Name=CCO56_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08650;old_locus_tag=CCO56_08650 NZ_NPMB01000003.1 Protein Homology CDS 472228 472665 . + 0 ID=cds-WP_000973248.1;Parent=gene-CCO56_RS08650;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=CCO56_RS08650;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11 ##sequence-region NZ_NPMB01000030.1 1 583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000030.1 RefSeq region 1 583 . + . ID=NZ_NPMB01000030.1:1..583;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000030.1 RefSeq gene 1 105 . - . ID=gene-CCO56_RS23230;Name=CCO56_RS23230;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS23230;old_locus_tag=CCO56_23215;partial=true;start_range=.,1 NZ_NPMB01000030.1 cmsearch rRNA 1 105 . - . ID=rna-CCO56_RS23230;Parent=gene-CCO56_RS23230;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23230;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000030.1 cmsearch exon 1 105 . - . ID=exon-CCO56_RS23230-1;Parent=rna-CCO56_RS23230;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23230;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000030.1 RefSeq gene 299 374 . - . ID=gene-CCO56_RS23235;Name=CCO56_RS23235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS23235;old_locus_tag=CCO56_23220 NZ_NPMB01000030.1 tRNAscan-SE tRNA 299 374 . - . ID=rna-CCO56_RS23235;Parent=gene-CCO56_RS23235;anticodon=(pos:complement(338..340));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23235;product=tRNA-Glu NZ_NPMB01000030.1 tRNAscan-SE exon 299 374 . - . ID=exon-CCO56_RS23235-1;Parent=rna-CCO56_RS23235;anticodon=(pos:complement(338..340));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS23235;product=tRNA-Glu NZ_NPMB01000030.1 RefSeq gene 460 583 . - . ID=gene-CCO56_RS23240;Name=CCO56_RS23240;end_range=583,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS23240;old_locus_tag=CCO56_23225;partial=true NZ_NPMB01000030.1 cmsearch rRNA 460 583 . - . ID=rna-CCO56_RS23240;Parent=gene-CCO56_RS23240;Dbxref=RFAM:RF00177;end_range=583,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23240;partial=true;product=16S ribosomal RNA NZ_NPMB01000030.1 cmsearch exon 460 583 . - . ID=exon-CCO56_RS23240-1;Parent=rna-CCO56_RS23240;Dbxref=RFAM:RF00177;end_range=583,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23240;partial=true;product=16S ribosomal RNA ##sequence-region NZ_NPMB01000031.1 1 556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000031.1 RefSeq region 1 556 . + . ID=NZ_NPMB01000031.1:1..556;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000031.1 RefSeq gene 1 556 . - . ID=gene-CCO56_RS23245;Name=CCO56_RS23245;end_range=556,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS23245;old_locus_tag=CCO56_23230;partial=true;start_range=.,1 NZ_NPMB01000031.1 cmsearch rRNA 1 556 . - . ID=rna-CCO56_RS23245;Parent=gene-CCO56_RS23245;Dbxref=RFAM:RF02541;end_range=556,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23245;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000031.1 cmsearch exon 1 556 . - . ID=exon-CCO56_RS23245-1;Parent=rna-CCO56_RS23245;Dbxref=RFAM:RF02541;end_range=556,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS23245;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_NPMB01000004.1 1 448683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000004.1 RefSeq region 1 448683 . + . ID=NZ_NPMB01000004.1:1..448683;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000004.1 RefSeq pseudogene 114 212 . - . ID=gene-CCO56_RS23775;Name=CCO56_RS23775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23775;partial=true;pseudo=true;start_range=.,114 NZ_NPMB01000004.1 Protein Homology CDS 114 212 . - 0 ID=cds-CCO56_RS23775;Parent=gene-CCO56_RS23775;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=CCO56_RS23775;partial=true;product=RNA polymerase sigma factor RpoS;pseudo=true;start_range=.,114;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 275 1357 . - . ID=gene-CCO56_RS08655;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=CCO56_RS08655;old_locus_tag=CCO56_08655 NZ_NPMB01000004.1 Protein Homology CDS 275 1357 . - 0 ID=cds-WP_223151197.1;Parent=gene-CCO56_RS08655;Dbxref=GenBank:WP_223151197.1;Name=WP_223151197.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=CCO56_RS08655;product=murein hydrolase activator NlpD;protein_id=WP_223151197.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 1287 1445 . + . ID=gene-CCO56_RS23780;Name=CCO56_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23780 NZ_NPMB01000004.1 Protein Homology CDS 1287 1445 . + 0 ID=cds-WP_223148970.1;Parent=gene-CCO56_RS23780;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=CCO56_RS23780;product=peptidase;protein_id=WP_223148970.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 1584 2210 . - . ID=gene-CCO56_RS08660;Name=CCO56_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08660;old_locus_tag=CCO56_08660 NZ_NPMB01000004.1 Protein Homology CDS 1584 2210 . - 0 ID=cds-WP_000253542.1;Parent=gene-CCO56_RS08660;Dbxref=GenBank:WP_000253542.1;Name=WP_000253542.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=CCO56_RS08660;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253542.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 2204 2965 . - . ID=gene-CCO56_RS08665;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=CCO56_RS08665;old_locus_tag=CCO56_08665 NZ_NPMB01000004.1 Protein Homology CDS 2204 2965 . - 0 ID=cds-WP_001221537.1;Parent=gene-CCO56_RS08665;Dbxref=GenBank:WP_001221537.1;Name=WP_001221537.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=CCO56_RS08665;product=5'/3'-nucleotidase SurE;protein_id=WP_001221537.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 2946 3995 . - . ID=gene-CCO56_RS08670;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=CCO56_RS08670;old_locus_tag=CCO56_08670 NZ_NPMB01000004.1 Protein Homology CDS 2946 3995 . - 0 ID=cds-WP_000134246.1;Parent=gene-CCO56_RS08670;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=CCO56_RS08670;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 3992 4471 . - . ID=gene-CCO56_RS08675;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CCO56_RS08675;old_locus_tag=CCO56_08675 NZ_NPMB01000004.1 Protein Homology CDS 3992 4471 . - 0 ID=cds-WP_001219249.1;Parent=gene-CCO56_RS08675;Dbxref=GenBank:WP_001219249.1;Name=WP_001219249.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=CCO56_RS08675;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219249.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 4471 5181 . - . ID=gene-CCO56_RS08680;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CCO56_RS08680;old_locus_tag=CCO56_08680 NZ_NPMB01000004.1 Protein Homology CDS 4471 5181 . - 0 ID=cds-WP_000741653.1;Parent=gene-CCO56_RS08680;Dbxref=GenBank:WP_000741653.1;Name=WP_000741653.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=CCO56_RS08680;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741653.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 5200 5511 . - . ID=gene-CCO56_RS08685;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=CCO56_RS08685;old_locus_tag=CCO56_08685 NZ_NPMB01000004.1 Protein Homology CDS 5200 5511 . - 0 ID=cds-WP_000517480.1;Parent=gene-CCO56_RS08685;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=CCO56_RS08685;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 5702 6025 . - . ID=gene-CCO56_RS08690;Name=CCO56_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08690;old_locus_tag=CCO56_08690 NZ_NPMB01000004.1 Protein Homology CDS 5702 6025 . - 0 ID=cds-WP_001537530.1;Parent=gene-CCO56_RS08690;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=CCO56_RS08690;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 6076 6681 . - . ID=gene-CCO56_RS08695;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=CCO56_RS08695;old_locus_tag=CCO56_08695 NZ_NPMB01000004.1 Protein Homology CDS 6076 6681 . - 0 ID=cds-WP_001173663.1;Parent=gene-CCO56_RS08695;Dbxref=GenBank:WP_001173663.1;Name=WP_001173663.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=CCO56_RS08695;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 6668 8107 . - . ID=gene-CCO56_RS08700;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=CCO56_RS08700;old_locus_tag=CCO56_08700 NZ_NPMB01000004.1 Protein Homology CDS 6668 8107 . - 0 ID=cds-WP_001092256.1;Parent=gene-CCO56_RS08700;Dbxref=GenBank:WP_001092256.1;Name=WP_001092256.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=CCO56_RS08700;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001092256.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 8117 9025 . - . ID=gene-CCO56_RS08705;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=CCO56_RS08705;old_locus_tag=CCO56_08705 NZ_NPMB01000004.1 Protein Homology CDS 8117 9025 . - 0 ID=cds-WP_000372384.1;Parent=gene-CCO56_RS08705;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=CCO56_RS08705;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 9276 10322 . + . ID=gene-CCO56_RS08710;Name=CCO56_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08710;old_locus_tag=CCO56_08710 NZ_NPMB01000004.1 Protein Homology CDS 9276 10322 . + 0 ID=cds-WP_023212181.1;Parent=gene-CCO56_RS08710;Dbxref=GenBank:WP_023212181.1;Name=WP_023212181.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=CCO56_RS08710;product=aminopeptidase;protein_id=WP_023212181.1;transl_table=11 NZ_NPMB01000004.1 RefSeq direct_repeat 10337 11524 . + . ID=id-NZ_NPMB01000004.1:10337..11524;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=10337..10365;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_NPMB01000004.1 RefSeq gene 11621 11914 . - . ID=gene-CCO56_RS08715;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=CCO56_RS08715;old_locus_tag=CCO56_08715 NZ_NPMB01000004.1 Protein Homology CDS 11621 11914 . - 0 ID=cds-WP_001518648.1;Parent=gene-CCO56_RS08715;Dbxref=GenBank:WP_001518648.1;Name=WP_001518648.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=CCO56_RS08715;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_001518648.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 11914 12834 . - . ID=gene-CCO56_RS08720;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=CCO56_RS08720;old_locus_tag=CCO56_08720 NZ_NPMB01000004.1 Protein Homology CDS 11914 12834 . - 0 ID=cds-WP_000144832.1;Parent=gene-CCO56_RS08720;Dbxref=GenBank:WP_000144832.1;Name=WP_000144832.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=CCO56_RS08720;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144832.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 12831 13481 . - . ID=gene-CCO56_RS08725;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=CCO56_RS08725;old_locus_tag=CCO56_08725 NZ_NPMB01000004.1 Protein Homology CDS 12831 13481 . - 0 ID=cds-WP_080177025.1;Parent=gene-CCO56_RS08725;Dbxref=GenBank:WP_080177025.1;Name=WP_080177025.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=CCO56_RS08725;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_080177025.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 13463 14209 . - . ID=gene-CCO56_RS08730;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=CCO56_RS08730;old_locus_tag=CCO56_08730 NZ_NPMB01000004.1 Protein Homology CDS 13463 14209 . - 0 ID=cds-WP_080177024.1;Parent=gene-CCO56_RS08730;Dbxref=GenBank:WP_080177024.1;Name=WP_080177024.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=CCO56_RS08730;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_080177024.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 14220 15278 . - . ID=gene-CCO56_RS08735;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=CCO56_RS08735;old_locus_tag=CCO56_08735 NZ_NPMB01000004.1 Protein Homology CDS 14220 15278 . - 0 ID=cds-WP_080177023.1;Parent=gene-CCO56_RS08735;Dbxref=GenBank:WP_080177023.1;Name=WP_080177023.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=CCO56_RS08735;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_080177023.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 15292 15840 . - . ID=gene-CCO56_RS08740;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=CCO56_RS08740;old_locus_tag=CCO56_08740 NZ_NPMB01000004.1 Protein Homology CDS 15292 15840 . - 0 ID=cds-WP_080177022.1;Parent=gene-CCO56_RS08740;Dbxref=GenBank:WP_080177022.1;Name=WP_080177022.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117945.1;locus_tag=CCO56_RS08740;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_080177022.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 15837 17393 . - . ID=gene-CCO56_RS08745;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=CCO56_RS08745;old_locus_tag=CCO56_08745 NZ_NPMB01000004.1 Protein Homology CDS 15837 17393 . - 0 ID=cds-WP_080177021.1;Parent=gene-CCO56_RS08745;Dbxref=GenBank:WP_080177021.1;Name=WP_080177021.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=CCO56_RS08745;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_080177021.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 17405 20068 . - . ID=gene-CCO56_RS08750;Name=CCO56_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08750;old_locus_tag=CCO56_08750 NZ_NPMB01000004.1 Protein Homology CDS 17405 20068 . - 0 ID=cds-WP_080177020.1;Parent=gene-CCO56_RS08750;Dbxref=GenBank:WP_080177020.1;Name=WP_080177020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=CCO56_RS08750;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_080177020.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 20512 21465 . + . ID=gene-CCO56_RS08760;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=CCO56_RS08760;old_locus_tag=CCO56_08760 NZ_NPMB01000004.1 Protein Homology CDS 20512 21465 . + 0 ID=cds-WP_080177019.1;Parent=gene-CCO56_RS08760;Dbxref=GenBank:WP_080177019.1;Name=WP_080177019.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=CCO56_RS08760;product=SPI-1 type III secretion system effector SopD;protein_id=WP_080177019.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 21553 22287 . - . ID=gene-CCO56_RS08765;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=CCO56_RS08765;old_locus_tag=CCO56_08765 NZ_NPMB01000004.1 Protein Homology CDS 21553 22287 . - 0 ID=cds-WP_023201489.1;Parent=gene-CCO56_RS08765;Dbxref=GenBank:WP_023201489.1;Name=WP_023201489.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=CCO56_RS08765;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_023201489.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 22363 24075 . - . ID=gene-CCO56_RS08775;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=CCO56_RS08775;old_locus_tag=CCO56_08775 NZ_NPMB01000004.1 Protein Homology CDS 22363 24075 . - 0 ID=cds-WP_023217766.1;Parent=gene-CCO56_RS08775;Dbxref=GenBank:WP_023217766.1;Name=WP_023217766.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=CCO56_RS08775;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_023217766.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 24075 25874 . - . ID=gene-CCO56_RS08780;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=CCO56_RS08780;old_locus_tag=CCO56_08780 NZ_NPMB01000004.1 Protein Homology CDS 24075 25874 . - 0 ID=cds-WP_080177018.1;Parent=gene-CCO56_RS08780;Dbxref=GenBank:WP_080177018.1;Name=WP_080177018.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=CCO56_RS08780;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_080177018.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 26310 26672 . + . ID=gene-CCO56_RS08790;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CCO56_RS08790;old_locus_tag=CCO56_08790 NZ_NPMB01000004.1 Protein Homology CDS 26310 26672 . + 0 ID=cds-WP_000108312.1;Parent=gene-CCO56_RS08790;Dbxref=GenBank:WP_000108312.1;Name=WP_000108312.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=CCO56_RS08790;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108312.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 26760 27557 . - . ID=gene-CCO56_RS08795;Name=CCO56_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08795;old_locus_tag=CCO56_08795 NZ_NPMB01000004.1 Protein Homology CDS 26760 27557 . - 0 ID=cds-WP_080177017.1;Parent=gene-CCO56_RS08795;Dbxref=GenBank:WP_080177017.1;Name=WP_080177017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=CCO56_RS08795;product=MBL fold metallo-hydrolase;protein_id=WP_080177017.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 28224 28895 . - . ID=gene-CCO56_RS08800;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CCO56_RS08800;old_locus_tag=CCO56_08800 NZ_NPMB01000004.1 Protein Homology CDS 28224 28895 . - 0 ID=cds-WP_001199956.1;Parent=gene-CCO56_RS08800;Dbxref=GenBank:WP_001199956.1;Name=WP_001199956.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=CCO56_RS08800;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199956.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 29031 30329 . - . ID=gene-CCO56_RS08805;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CCO56_RS08805;old_locus_tag=CCO56_08805 NZ_NPMB01000004.1 Protein Homology CDS 29031 30329 . - 0 ID=cds-WP_000036734.1;Parent=gene-CCO56_RS08805;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=CCO56_RS08805;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 30412 32049 . - . ID=gene-CCO56_RS08810;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CCO56_RS08810;old_locus_tag=CCO56_08810 NZ_NPMB01000004.1 Protein Homology CDS 30412 32049 . - 0 ID=cds-WP_000210864.1;Parent=gene-CCO56_RS08810;Dbxref=GenBank:WP_000210864.1;Name=WP_000210864.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=CCO56_RS08810;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210864.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 32277 33077 . - . ID=gene-CCO56_RS08815;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=CCO56_RS08815;old_locus_tag=CCO56_08815 NZ_NPMB01000004.1 Protein Homology CDS 32277 33077 . - 0 ID=cds-WP_000210451.1;Parent=gene-CCO56_RS08815;Dbxref=GenBank:WP_000210451.1;Name=WP_000210451.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=CCO56_RS08815;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210451.1;transl_table=11 NZ_NPMB01000004.1 RefSeq pseudogene 33685 33828 . + . ID=gene-CCO56_RS23785;Name=CCO56_RS23785;end_range=33828,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23785;old_locus_tag=CCO56_08820;partial=true;pseudo=true NZ_NPMB01000004.1 Protein Homology CDS 33685 33828 . + 0 ID=cds-CCO56_RS23785;Parent=gene-CCO56_RS23785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=33828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=CCO56_RS23785;partial=true;product=fimbrial protein SteA;pseudo=true;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 33847 34143 . - . ID=gene-CCO56_RS08825;Name=CCO56_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08825;old_locus_tag=CCO56_08825 NZ_NPMB01000004.1 Protein Homology CDS 33847 34143 . - 0 ID=cds-WP_000633744.1;Parent=gene-CCO56_RS08825;Dbxref=GenBank:WP_000633744.1;Name=WP_000633744.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=CCO56_RS08825;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000633744.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 34109 34465 . - . ID=gene-CCO56_RS08830;Name=CCO56_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08830;old_locus_tag=CCO56_08830 NZ_NPMB01000004.1 Protein Homology CDS 34109 34465 . - 0 ID=cds-WP_072102304.1;Parent=gene-CCO56_RS08830;Dbxref=GenBank:WP_072102304.1;Name=WP_072102304.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=CCO56_RS08830;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_072102304.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 34550 36784 . - . ID=gene-CCO56_RS08835;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=CCO56_RS08835;old_locus_tag=CCO56_08835 NZ_NPMB01000004.1 Protein Homology CDS 34550 36784 . - 0 ID=cds-WP_000226837.1;Parent=gene-CCO56_RS08835;Dbxref=GenBank:WP_000226837.1;Name=WP_000226837.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=CCO56_RS08835;product=GTP diphosphokinase;protein_id=WP_000226837.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 36836 38131 . - . ID=gene-CCO56_RS08840;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CCO56_RS08840;old_locus_tag=CCO56_08840 NZ_NPMB01000004.1 Protein Homology CDS 36836 38131 . - 0 ID=cds-WP_023220814.1;Parent=gene-CCO56_RS08840;Dbxref=GenBank:WP_023220814.1;Name=WP_023220814.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=CCO56_RS08840;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_023220814.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 38189 40945 . + . ID=gene-CCO56_RS08845;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=CCO56_RS08845;old_locus_tag=CCO56_08845 NZ_NPMB01000004.1 Protein Homology CDS 38189 40945 . + 0 ID=cds-WP_000186400.1;Parent=gene-CCO56_RS08845;Dbxref=GenBank:WP_000186400.1;Name=WP_000186400.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=CCO56_RS08845;product=two-component sensor histidine kinase BarA;protein_id=WP_000186400.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 40989 42131 . - . ID=gene-CCO56_RS08850;Name=CCO56_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08850;old_locus_tag=CCO56_08850 NZ_NPMB01000004.1 Protein Homology CDS 40989 42131 . - 0 ID=cds-WP_000706486.1;Parent=gene-CCO56_RS08850;Dbxref=GenBank:WP_000706486.1;Name=WP_000706486.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=CCO56_RS08850;product=glycerate kinase;protein_id=WP_000706486.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 42209 43549 . - . ID=gene-CCO56_RS08855;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=CCO56_RS08855;old_locus_tag=CCO56_08855 NZ_NPMB01000004.1 Protein Homology CDS 42209 43549 . - 0 ID=cds-WP_000107113.1;Parent=gene-CCO56_RS08855;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=CCO56_RS08855;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 43570 44910 . - . ID=gene-CCO56_RS08860;Name=CCO56_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08860;old_locus_tag=CCO56_08860 NZ_NPMB01000004.1 Protein Homology CDS 43570 44910 . - 0 ID=cds-WP_023231051.1;Parent=gene-CCO56_RS08860;Dbxref=GenBank:WP_023231051.1;Name=WP_023231051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=CCO56_RS08860;product=enolase C-terminal domain-like protein;protein_id=WP_023231051.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 44907 46265 . - . ID=gene-CCO56_RS08865;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=CCO56_RS08865;old_locus_tag=CCO56_08865 NZ_NPMB01000004.1 Protein Homology CDS 44907 46265 . - 0 ID=cds-WP_000097015.1;Parent=gene-CCO56_RS08865;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=CCO56_RS08865;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 46747 47196 . - . ID=gene-CCO56_RS08875;Name=CCO56_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08875;old_locus_tag=CCO56_08875 NZ_NPMB01000004.1 Protein Homology CDS 46747 47196 . - 0 ID=cds-WP_000807739.1;Parent=gene-CCO56_RS08875;Dbxref=GenBank:WP_000807739.1;Name=WP_000807739.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=CCO56_RS08875;product=flavodoxin;protein_id=WP_000807739.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 47215 47997 . - . ID=gene-CCO56_RS08880;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=CCO56_RS08880;old_locus_tag=CCO56_08880 NZ_NPMB01000004.1 Protein Homology CDS 47215 47997 . - 0 ID=cds-WP_000890030.1;Parent=gene-CCO56_RS08880;Dbxref=GenBank:WP_000890030.1;Name=WP_000890030.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=CCO56_RS08880;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890030.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 47997 48326 . - . ID=gene-CCO56_RS08885;Name=CCO56_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08885;old_locus_tag=CCO56_08885 NZ_NPMB01000004.1 Protein Homology CDS 47997 48326 . - 0 ID=cds-WP_001527916.1;Parent=gene-CCO56_RS08885;Dbxref=GenBank:WP_001527916.1;Name=WP_001527916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=CCO56_RS08885;product=YqcC family protein;protein_id=WP_001527916.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 48938 49483 . - . ID=gene-CCO56_RS08895;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=CCO56_RS08895;old_locus_tag=CCO56_08895 NZ_NPMB01000004.1 Protein Homology CDS 48938 49483 . - 0 ID=cds-WP_000343990.1;Parent=gene-CCO56_RS08895;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=CCO56_RS08895;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 49552 50400 . + . ID=gene-CCO56_RS08900;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CCO56_RS08900;old_locus_tag=CCO56_08900 NZ_NPMB01000004.1 Protein Homology CDS 49552 50400 . + 0 ID=cds-WP_000100465.1;Parent=gene-CCO56_RS08900;Dbxref=GenBank:WP_000100465.1;Name=WP_000100465.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=CCO56_RS08900;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100465.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 50514 51878 . + . ID=gene-CCO56_RS08905;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=CCO56_RS08905;old_locus_tag=CCO56_08905 NZ_NPMB01000004.1 Protein Homology CDS 50514 51878 . + 0 ID=cds-WP_000627973.1;Parent=gene-CCO56_RS08905;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=CCO56_RS08905;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 52443 53732 . + . ID=gene-CCO56_RS08910;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=CCO56_RS08910;old_locus_tag=CCO56_08910 NZ_NPMB01000004.1 Protein Homology CDS 52443 53732 . + 0 ID=cds-WP_000450462.1;Parent=gene-CCO56_RS08910;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=CCO56_RS08910;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 53791 55158 . + . ID=gene-CCO56_RS08915;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=CCO56_RS08915;old_locus_tag=CCO56_08915 NZ_NPMB01000004.1 Protein Homology CDS 53791 55158 . + 0 ID=cds-WP_000626384.1;Parent=gene-CCO56_RS08915;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=CCO56_RS08915;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 55328 56083 . + . ID=gene-CCO56_RS08925;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=CCO56_RS08925;old_locus_tag=CCO56_08925 NZ_NPMB01000004.1 Protein Homology CDS 55328 56083 . + 0 ID=cds-WP_001818022.1;Parent=gene-CCO56_RS08925;Dbxref=GenBank:WP_001818022.1;Name=WP_001818022.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=CCO56_RS08925;product=flap endonuclease Xni;protein_id=WP_001818022.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 56175 57323 . - . ID=gene-CCO56_RS08930;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO56_RS08930;old_locus_tag=CCO56_08930 NZ_NPMB01000004.1 Protein Homology CDS 56175 57323 . - 0 ID=cds-WP_000013562.1;Parent=gene-CCO56_RS08930;Dbxref=GenBank:WP_000013562.1;Name=WP_000013562.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=CCO56_RS08930;product=lactaldehyde reductase;protein_id=WP_000013562.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 57340 57987 . - . ID=gene-CCO56_RS08935;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=CCO56_RS08935;old_locus_tag=CCO56_08935 NZ_NPMB01000004.1 Protein Homology CDS 57340 57987 . - 0 ID=cds-WP_000440828.1;Parent=gene-CCO56_RS08935;Dbxref=GenBank:WP_000440828.1;Name=WP_000440828.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=CCO56_RS08935;product=L-fuculose-phosphate aldolase;protein_id=WP_000440828.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 58543 59859 . + . ID=gene-CCO56_RS08940;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO56_RS08940;old_locus_tag=CCO56_08940 NZ_NPMB01000004.1 Protein Homology CDS 58543 59859 . + 0 ID=cds-WP_000528622.1;Parent=gene-CCO56_RS08940;Dbxref=GenBank:WP_000528622.1;Name=WP_000528622.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=CCO56_RS08940;product=L-fucose:H+ symporter permease;protein_id=WP_000528622.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 59891 61666 . + . ID=gene-CCO56_RS08945;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=CCO56_RS08945;old_locus_tag=CCO56_08945 NZ_NPMB01000004.1 Protein Homology CDS 59891 61666 . + 0 ID=cds-WP_000724126.1;Parent=gene-CCO56_RS08945;Dbxref=GenBank:WP_000724126.1;Name=WP_000724126.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=CCO56_RS08945;product=L-fucose isomerase;protein_id=WP_000724126.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 61767 63185 . + . ID=gene-CCO56_RS08950;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=CCO56_RS08950;old_locus_tag=CCO56_08950 NZ_NPMB01000004.1 Protein Homology CDS 61767 63185 . + 0 ID=cds-WP_023233371.1;Parent=gene-CCO56_RS08950;Dbxref=GenBank:WP_023233371.1;Name=WP_023233371.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=CCO56_RS08950;product=L-fuculokinase;protein_id=WP_023233371.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 63187 63609 . + . ID=gene-CCO56_RS08955;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=CCO56_RS08955;old_locus_tag=CCO56_08955 NZ_NPMB01000004.1 Protein Homology CDS 63187 63609 . + 0 ID=cds-WP_000920848.1;Parent=gene-CCO56_RS08955;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=CCO56_RS08955;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 63667 64377 . + . ID=gene-CCO56_RS08960;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=CCO56_RS08960;old_locus_tag=CCO56_08960 NZ_NPMB01000004.1 Protein Homology CDS 63667 64377 . + 0 ID=cds-WP_000642330.1;Parent=gene-CCO56_RS08960;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=CCO56_RS08960;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 64436 65536 . - . ID=gene-CCO56_RS08965;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=CCO56_RS08965;old_locus_tag=CCO56_08965 NZ_NPMB01000004.1 Protein Homology CDS 64436 65536 . - 0 ID=cds-WP_001045494.1;Parent=gene-CCO56_RS08965;Dbxref=GenBank:WP_001045494.1;Name=WP_001045494.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=CCO56_RS08965;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045494.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 65529 65924 . - . ID=gene-CCO56_RS08970;Name=CCO56_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08970;old_locus_tag=CCO56_08970 NZ_NPMB01000004.1 Protein Homology CDS 65529 65924 . - 0 ID=cds-WP_000203913.1;Parent=gene-CCO56_RS08970;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=CCO56_RS08970;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 65943 66860 . - . ID=gene-CCO56_RS08975;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=CCO56_RS08975;old_locus_tag=CCO56_08975 NZ_NPMB01000004.1 Protein Homology CDS 65943 66860 . - 0 ID=cds-WP_000044409.1;Parent=gene-CCO56_RS08975;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=CCO56_RS08975;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 67207 67434 . - . ID=gene-CCO56_RS08980;Name=CCO56_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS08980;old_locus_tag=CCO56_08980 NZ_NPMB01000004.1 Protein Homology CDS 67207 67434 . - 0 ID=cds-WP_000750393.1;Parent=gene-CCO56_RS08980;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=CCO56_RS08980;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 67627 68832 . + . ID=gene-CCO56_RS08985;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=CCO56_RS08985;old_locus_tag=CCO56_08985 NZ_NPMB01000004.1 Protein Homology CDS 67627 68832 . + 0 ID=cds-WP_000991052.1;Parent=gene-CCO56_RS08985;Dbxref=GenBank:WP_000991052.1;Name=WP_000991052.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=CCO56_RS08985;product=cysteine desulfurase CsdA;protein_id=WP_000991052.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 68832 69275 . + . ID=gene-CCO56_RS08990;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=CCO56_RS08990;old_locus_tag=CCO56_08990 NZ_NPMB01000004.1 Protein Homology CDS 68832 69275 . + 0 ID=cds-WP_000184197.1;Parent=gene-CCO56_RS08990;Dbxref=GenBank:WP_000184197.1;Name=WP_000184197.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=CCO56_RS08990;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184197.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 69575 70462 . + . ID=gene-CCO56_RS08995;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO56_RS08995;old_locus_tag=CCO56_08995 NZ_NPMB01000004.1 Protein Homology CDS 69575 70462 . + 0 ID=cds-WP_077906266.1;Parent=gene-CCO56_RS08995;Dbxref=GenBank:WP_077906266.1;Name=WP_077906266.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=CCO56_RS08995;product=EamA family transporter RarD;protein_id=WP_077906266.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 70514 71320 . - . ID=gene-CCO56_RS09000;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=CCO56_RS09000;old_locus_tag=CCO56_09000 NZ_NPMB01000004.1 Protein Homology CDS 70514 71320 . - 0 ID=cds-WP_000117742.1;Parent=gene-CCO56_RS09000;Dbxref=GenBank:WP_000117742.1;Name=WP_000117742.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=CCO56_RS09000;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117742.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 71430 72527 . - . ID=gene-CCO56_RS09005;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=CCO56_RS09005;old_locus_tag=CCO56_09005 NZ_NPMB01000004.1 Protein Homology CDS 71430 72527 . - 0 ID=cds-WP_000678621.1;Parent=gene-CCO56_RS09005;Dbxref=GenBank:WP_000678621.1;Name=WP_000678621.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=CCO56_RS09005;product=murein transglycosylase A;protein_id=WP_000678621.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 72735 72811 . + . ID=gene-CCO56_RS09010;Name=CCO56_RS09010;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS09010;old_locus_tag=CCO56_09010 NZ_NPMB01000004.1 tRNAscan-SE tRNA 72735 72811 . + . ID=rna-CCO56_RS09010;Parent=gene-CCO56_RS09010;anticodon=(pos:72769..72771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS09010;product=tRNA-Met NZ_NPMB01000004.1 tRNAscan-SE exon 72735 72811 . + . ID=exon-CCO56_RS09010-1;Parent=rna-CCO56_RS09010;anticodon=(pos:72769..72771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS09010;product=tRNA-Met NZ_NPMB01000004.1 RefSeq gene 72921 74174 . - . ID=gene-CCO56_RS09015;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=CCO56_RS09015;old_locus_tag=CCO56_09015 NZ_NPMB01000004.1 Protein Homology CDS 72921 74174 . - 0 ID=cds-WP_000011919.1;Parent=gene-CCO56_RS09015;Dbxref=GenBank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=CCO56_RS09015;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 74407 75738 . + . ID=gene-CCO56_RS09020;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=CCO56_RS09020;old_locus_tag=CCO56_09020 NZ_NPMB01000004.1 Protein Homology CDS 74407 75738 . + 0 ID=cds-WP_000588963.1;Parent=gene-CCO56_RS09020;Dbxref=GenBank:WP_000588963.1;Name=WP_000588963.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=CCO56_RS09020;product=amino-acid N-acetyltransferase;protein_id=WP_000588963.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 75841 77676 . - . ID=gene-CCO56_RS09025;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=CCO56_RS09025;old_locus_tag=CCO56_09025 NZ_NPMB01000004.1 Protein Homology CDS 75841 77676 . - 0 ID=cds-WP_000155138.1;Parent=gene-CCO56_RS09025;Dbxref=GenBank:WP_000155138.1;Name=WP_000155138.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=CCO56_RS09025;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000155138.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 77673 81218 . - . ID=gene-CCO56_RS09030;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=CCO56_RS09030;old_locus_tag=CCO56_09030 NZ_NPMB01000004.1 Protein Homology CDS 77673 81218 . - 0 ID=cds-WP_080176965.1;Parent=gene-CCO56_RS09030;Dbxref=GenBank:WP_080176965.1;Name=WP_080176965.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=CCO56_RS09030;product=exodeoxyribonuclease V subunit beta;protein_id=WP_080176965.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 81211 84099 . - . ID=gene-CCO56_RS09035;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=CCO56_RS09035;old_locus_tag=CCO56_09035 NZ_NPMB01000004.1 Protein Homology CDS 81211 84099 . - 0 ID=cds-WP_001138240.1;Parent=gene-CCO56_RS09035;Dbxref=GenBank:WP_001138240.1;Name=WP_001138240.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=CCO56_RS09035;product=pitrilysin;protein_id=WP_001138240.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 84277 87648 . - . ID=gene-CCO56_RS09040;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=CCO56_RS09040;old_locus_tag=CCO56_09040 NZ_NPMB01000004.1 Protein Homology CDS 84277 87648 . - 0 ID=cds-WP_023233366.1;Parent=gene-CCO56_RS09040;Dbxref=GenBank:WP_023233366.1;Name=WP_023233366.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=CCO56_RS09040;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_023233366.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 87664 87984 . - . ID=gene-CCO56_RS09045;Name=CCO56_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09045;old_locus_tag=CCO56_09045 NZ_NPMB01000004.1 Protein Homology CDS 87664 87984 . - 0 ID=cds-WP_000019284.1;Parent=gene-CCO56_RS09045;Dbxref=GenBank:WP_000019284.1;Name=WP_000019284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=CCO56_RS09045;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019284.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 87969 88376 . - . ID=gene-CCO56_RS09050;Name=CCO56_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09050;old_locus_tag=CCO56_09050 NZ_NPMB01000004.1 Protein Homology CDS 87969 88376 . - 0 ID=cds-WP_001078532.1;Parent=gene-CCO56_RS09050;Dbxref=GenBank:WP_001078532.1;Name=WP_001078532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=CCO56_RS09050;product=DUF2509 family protein;protein_id=WP_001078532.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 88373 88936 . - . ID=gene-CCO56_RS09055;Name=CCO56_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09055;old_locus_tag=CCO56_09055 NZ_NPMB01000004.1 Protein Homology CDS 88373 88936 . - 0 ID=cds-WP_000029156.1;Parent=gene-CCO56_RS09055;Dbxref=GenBank:WP_000029156.1;Name=WP_000029156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=CCO56_RS09055;product=prepilin peptidase-dependent protein;protein_id=WP_000029156.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 88927 89397 . - . ID=gene-CCO56_RS09060;Name=CCO56_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09060;old_locus_tag=CCO56_09060 NZ_NPMB01000004.1 Protein Homology CDS 88927 89397 . - 0 ID=cds-WP_000744668.1;Parent=gene-CCO56_RS09060;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=CCO56_RS09060;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 89582 90376 . - . ID=gene-CCO56_RS09070;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=CCO56_RS09070;old_locus_tag=CCO56_09070 NZ_NPMB01000004.1 Protein Homology CDS 89582 90376 . - 0 ID=cds-WP_023233405.1;Parent=gene-CCO56_RS09070;Dbxref=GenBank:WP_023233405.1;Name=WP_023233405.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=CCO56_RS09070;product=thymidylate synthase;protein_id=WP_023233405.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 90383 91258 . - . ID=gene-CCO56_RS09075;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CCO56_RS09075;old_locus_tag=CCO56_09075 NZ_NPMB01000004.1 Protein Homology CDS 90383 91258 . - 0 ID=cds-WP_000204647.1;Parent=gene-CCO56_RS09075;Dbxref=GenBank:WP_000204647.1;Name=WP_000204647.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=CCO56_RS09075;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204647.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 91474 93720 . - . ID=gene-CCO56_RS09080;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO56_RS09080;old_locus_tag=CCO56_09080 NZ_NPMB01000004.1 Protein Homology CDS 91474 93720 . - 0 ID=cds-WP_000957888.1;Parent=gene-CCO56_RS09080;Dbxref=GenBank:WP_000957888.1;Name=WP_000957888.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=CCO56_RS09080;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957888.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 93733 94263 . - . ID=gene-CCO56_RS09085;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=CCO56_RS09085;old_locus_tag=CCO56_09085 NZ_NPMB01000004.1 Protein Homology CDS 93733 94263 . - 0 ID=cds-WP_000564481.1;Parent=gene-CCO56_RS09085;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=CCO56_RS09085;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 94946 95641 . + . ID=gene-CCO56_RS09090;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=CCO56_RS09090;old_locus_tag=CCO56_09090 NZ_NPMB01000004.1 Protein Homology CDS 94946 95641 . + 0 ID=cds-WP_001274930.1;Parent=gene-CCO56_RS09090;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=CCO56_RS09090;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 95823 96536 . + . ID=gene-CCO56_RS09095;Name=CCO56_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09095;old_locus_tag=CCO56_09095 NZ_NPMB01000004.1 Protein Homology CDS 95823 96536 . + 0 ID=cds-WP_000895635.1;Parent=gene-CCO56_RS09095;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=CCO56_RS09095;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 96706 96924 . + . ID=gene-CCO56_RS09100;Name=CCO56_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09100;old_locus_tag=CCO56_09100 NZ_NPMB01000004.1 Protein Homology CDS 96706 96924 . + 0 ID=cds-WP_000758662.1;Parent=gene-CCO56_RS09100;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=CCO56_RS09100;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 97115 98155 . + . ID=gene-CCO56_RS09105;Name=CCO56_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09105;old_locus_tag=CCO56_09105 NZ_NPMB01000004.1 Protein Homology CDS 97115 98155 . + 0 ID=cds-WP_000558960.1;Parent=gene-CCO56_RS09105;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=CCO56_RS09105;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 98242 99444 . - . ID=gene-CCO56_RS09110;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=CCO56_RS09110;old_locus_tag=CCO56_09110 NZ_NPMB01000004.1 Protein Homology CDS 98242 99444 . - 0 ID=cds-WP_000004690.1;Parent=gene-CCO56_RS09110;Dbxref=GenBank:WP_000004690.1;Name=WP_000004690.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=CCO56_RS09110;product=lysophospholipid transporter LplT;protein_id=WP_000004690.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 99437 101596 . - . ID=gene-CCO56_RS09115;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=CCO56_RS09115;old_locus_tag=CCO56_09115 NZ_NPMB01000004.1 Protein Homology CDS 99437 101596 . - 0 ID=cds-WP_000896101.1;Parent=gene-CCO56_RS09115;Dbxref=GenBank:WP_000896101.1;Name=WP_000896101.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=CCO56_RS09115;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896101.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 102189 103217 . + . ID=gene-CCO56_RS09120;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=CCO56_RS09120;old_locus_tag=CCO56_09120 NZ_NPMB01000004.1 Protein Homology CDS 102189 103217 . + 0 ID=cds-WP_000201030.1;Parent=gene-CCO56_RS09120;Dbxref=GenBank:WP_000201030.1;Name=WP_000201030.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=CCO56_RS09120;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201030.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 103228 104250 . + . ID=gene-CCO56_RS09125;Name=CCO56_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09125;old_locus_tag=CCO56_09125 NZ_NPMB01000004.1 Protein Homology CDS 103228 104250 . + 0 ID=cds-WP_000968338.1;Parent=gene-CCO56_RS09125;Dbxref=GenBank:WP_000968338.1;Name=WP_000968338.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=CCO56_RS09125;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968338.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 104260 105522 . - . ID=gene-CCO56_RS09130;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CCO56_RS09130;old_locus_tag=CCO56_09130 NZ_NPMB01000004.1 Protein Homology CDS 104260 105522 . - 0 ID=cds-WP_023257520.1;Parent=gene-CCO56_RS09130;Dbxref=GenBank:WP_023257520.1;Name=WP_023257520.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406298.1;locus_tag=CCO56_RS09130;product=diaminopimelate decarboxylase;protein_id=WP_023257520.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 105640 106575 . + . ID=gene-CCO56_RS09135;Name=CCO56_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09135;old_locus_tag=CCO56_09135 NZ_NPMB01000004.1 Protein Homology CDS 105640 106575 . + 0 ID=cds-WP_000741797.1;Parent=gene-CCO56_RS09135;Dbxref=GenBank:WP_000741797.1;Name=WP_000741797.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=CCO56_RS09135;product=LysR family transcriptional regulator;protein_id=WP_000741797.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 106547 107254 . - . ID=gene-CCO56_RS09140;Name=CCO56_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09140;old_locus_tag=CCO56_09140 NZ_NPMB01000004.1 Protein Homology CDS 106547 107254 . - 0 ID=cds-WP_000848629.1;Parent=gene-CCO56_RS09140;Dbxref=GenBank:WP_000848629.1;Name=WP_000848629.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=CCO56_RS09140;product=aspartate/glutamate racemase;protein_id=WP_000848629.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 107367 108785 . - . ID=gene-CCO56_RS09145;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=CCO56_RS09145;old_locus_tag=CCO56_09145 NZ_NPMB01000004.1 Protein Homology CDS 107367 108785 . - 0 ID=cds-WP_000253650.1;Parent=gene-CCO56_RS09145;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=CCO56_RS09145;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 109137 109898 . - . ID=gene-CCO56_RS09150;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=CCO56_RS09150;old_locus_tag=CCO56_09150 NZ_NPMB01000004.1 Protein Homology CDS 109137 109898 . - 0 ID=cds-WP_000602495.1;Parent=gene-CCO56_RS09150;Dbxref=GenBank:WP_000602495.1;Name=WP_000602495.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=CCO56_RS09150;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602495.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 109955 110791 . - . ID=gene-CCO56_RS09155;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=CCO56_RS09155;old_locus_tag=CCO56_09155 NZ_NPMB01000004.1 Protein Homology CDS 109955 110791 . - 0 ID=cds-WP_000383274.1;Parent=gene-CCO56_RS09155;Dbxref=GenBank:WP_000383274.1;Name=WP_000383274.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=CCO56_RS09155;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383274.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 111221 112399 . - . ID=gene-CCO56_RS09165;Name=CCO56_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09165;old_locus_tag=CCO56_09165 NZ_NPMB01000004.1 Protein Homology CDS 111221 112399 . - 0 ID=cds-WP_000665979.1;Parent=gene-CCO56_RS09165;Dbxref=GenBank:WP_000665979.1;Name=WP_000665979.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=CCO56_RS09165;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665979.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 112522 113385 . - . ID=gene-CCO56_RS09170;Name=CCO56_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09170;old_locus_tag=CCO56_09170 NZ_NPMB01000004.1 Protein Homology CDS 112522 113385 . - 0 ID=cds-WP_001270773.1;Parent=gene-CCO56_RS09170;Dbxref=GenBank:WP_001270773.1;Name=WP_001270773.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=CCO56_RS09170;product=LysR family transcriptional regulator;protein_id=WP_001270773.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 113489 113944 . + . ID=gene-CCO56_RS09175;Name=CCO56_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09175;old_locus_tag=CCO56_09175 NZ_NPMB01000004.1 Protein Homology CDS 113489 113944 . + 0 ID=cds-WP_001519547.1;Parent=gene-CCO56_RS09175;Dbxref=GenBank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=CCO56_RS09175;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 114086 115315 . + . ID=gene-CCO56_RS09180;Name=CCO56_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09180;old_locus_tag=CCO56_09180 NZ_NPMB01000004.1 Protein Homology CDS 114086 115315 . + 0 ID=cds-WP_080176964.1;Parent=gene-CCO56_RS09180;Dbxref=GenBank:WP_080176964.1;Name=WP_080176964.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=CCO56_RS09180;product=amino acid permease;protein_id=WP_080176964.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 115346 115618 . - . ID=gene-CCO56_RS09185;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=CCO56_RS09185;old_locus_tag=CCO56_09185 NZ_NPMB01000004.1 Protein Homology CDS 115346 115618 . - 0 ID=cds-WP_000019953.1;Parent=gene-CCO56_RS09185;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=CCO56_RS09185;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 115720 116562 . + . ID=gene-CCO56_RS09190;Name=CCO56_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09190;old_locus_tag=CCO56_09190 NZ_NPMB01000004.1 Protein Homology CDS 115720 116562 . + 0 ID=cds-WP_015406297.1;Parent=gene-CCO56_RS09190;Dbxref=GenBank:WP_015406297.1;Name=WP_015406297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=CCO56_RS09190;product=nickel/cobalt efflux protein RcnA;protein_id=WP_015406297.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 116772 117530 . - . ID=gene-CCO56_RS09195;Name=CCO56_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09195;old_locus_tag=CCO56_09195 NZ_NPMB01000004.1 Protein Homology CDS 116772 117530 . - 0 ID=cds-WP_023262941.1;Parent=gene-CCO56_RS09195;Dbxref=GenBank:WP_023262941.1;Name=WP_023262941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=CCO56_RS09195;product=hypothetical protein;protein_id=WP_023262941.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 117517 118023 . - . ID=gene-CCO56_RS09200;Name=CCO56_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09200;old_locus_tag=CCO56_09200 NZ_NPMB01000004.1 Protein Homology CDS 117517 118023 . - 0 ID=cds-WP_000093331.1;Parent=gene-CCO56_RS09200;Dbxref=GenBank:WP_000093331.1;Name=WP_000093331.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=CCO56_RS09200;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000093331.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 118131 119213 . - . ID=gene-CCO56_RS09205;Name=CCO56_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09205;old_locus_tag=CCO56_09205 NZ_NPMB01000004.1 Protein Homology CDS 118131 119213 . - 0 ID=cds-WP_094882043.1;Parent=gene-CCO56_RS09205;Dbxref=GenBank:WP_094882043.1;Name=WP_094882043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=CCO56_RS09205;product=adhesion protein;protein_id=WP_094882043.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 119210 119953 . - . ID=gene-CCO56_RS09210;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=CCO56_RS09210;old_locus_tag=CCO56_09210 NZ_NPMB01000004.1 Protein Homology CDS 119210 119953 . - 0 ID=cds-WP_023213846.1;Parent=gene-CCO56_RS09210;Dbxref=GenBank:WP_023213846.1;Name=WP_023213846.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=CCO56_RS09210;product=fimbrial biogenesis chaperone StdC;protein_id=WP_023213846.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 119994 122483 . - . ID=gene-CCO56_RS09215;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=CCO56_RS09215;old_locus_tag=CCO56_09215 NZ_NPMB01000004.1 Protein Homology CDS 119994 122483 . - 0 ID=cds-WP_080176962.1;Parent=gene-CCO56_RS09215;Dbxref=GenBank:WP_080176962.1;Name=WP_080176962.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=CCO56_RS09215;product=fimbrial outer membrane usher protein StdB;protein_id=WP_080176962.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 122603 123187 . - . ID=gene-CCO56_RS09220;Name=CCO56_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09220;old_locus_tag=CCO56_09220 NZ_NPMB01000004.1 Protein Homology CDS 122603 123187 . - 0 ID=cds-WP_001244639.1;Parent=gene-CCO56_RS09220;Dbxref=GenBank:WP_001244639.1;Name=WP_001244639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738513.1;locus_tag=CCO56_RS09220;product=fimbrial protein;protein_id=WP_001244639.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 123906 124538 . - . ID=gene-CCO56_RS09225;Name=CCO56_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09225;old_locus_tag=CCO56_09225 NZ_NPMB01000004.1 Protein Homology CDS 123906 124538 . - 0 ID=cds-WP_000835269.1;Parent=gene-CCO56_RS09225;Dbxref=GenBank:WP_000835269.1;Name=WP_000835269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=CCO56_RS09225;product=YfdX family protein;protein_id=WP_000835269.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 124585 125121 . - . ID=gene-CCO56_RS09230;Name=CCO56_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09230;old_locus_tag=CCO56_09230 NZ_NPMB01000004.1 Protein Homology CDS 124585 125121 . - 0 ID=cds-WP_080176961.1;Parent=gene-CCO56_RS09230;Dbxref=GenBank:WP_080176961.1;Name=WP_080176961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=CCO56_RS09230;product=STM3031 family outer membrane protein;protein_id=WP_080176961.1;transl_table=11 NZ_NPMB01000004.1 RefSeq pseudogene 125925 126098 . - . ID=gene-CCO56_RS23360;Name=vapC;end_range=126098,.;gbkey=Gene;gene=vapC;gene_biotype=pseudogene;locus_tag=CCO56_RS23360;partial=true;pseudo=true NZ_NPMB01000004.1 Protein Homology CDS 125925 126098 . - 0 ID=cds-CCO56_RS23360;Parent=gene-CCO56_RS23360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=126098,.;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=CCO56_RS23360;partial=true;product=tRNA(fMet)-specific endonuclease VapC;pseudo=true;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 126285 127091 . + . ID=gene-CCO56_RS09245;Name=CCO56_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09245;old_locus_tag=CCO56_09245 NZ_NPMB01000004.1 Protein Homology CDS 126285 127091 . + 0 ID=cds-WP_001635492.1;Parent=gene-CCO56_RS09245;Dbxref=GenBank:WP_001635492.1;Name=WP_001635492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=CCO56_RS09245;product=DUF1460 domain-containing protein;protein_id=WP_001635492.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 127215 127288 . - . ID=gene-CCO56_RS09250;Name=CCO56_RS09250;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS09250;old_locus_tag=CCO56_09250 NZ_NPMB01000004.1 tRNAscan-SE tRNA 127215 127288 . - . ID=rna-CCO56_RS09250;Parent=gene-CCO56_RS09250;anticodon=(pos:complement(127254..127256));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS09250;product=tRNA-Gly NZ_NPMB01000004.1 tRNAscan-SE exon 127215 127288 . - . ID=exon-CCO56_RS09250-1;Parent=rna-CCO56_RS09250;anticodon=(pos:complement(127254..127256));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS09250;product=tRNA-Gly NZ_NPMB01000004.1 RefSeq gene 127368 128126 . - . ID=gene-CCO56_RS09255;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=CCO56_RS09255;old_locus_tag=CCO56_09255 NZ_NPMB01000004.1 Protein Homology CDS 127368 128126 . - 0 ID=cds-WP_000244328.1;Parent=gene-CCO56_RS09255;Dbxref=GenBank:WP_000244328.1;Name=WP_000244328.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=CCO56_RS09255;product=amidase activator ActS;protein_id=WP_000244328.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 128391 128936 . + . ID=gene-CCO56_RS09265;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=CCO56_RS09265;old_locus_tag=CCO56_09265 NZ_NPMB01000004.1 Protein Homology CDS 128391 128936 . + 0 ID=cds-WP_000133994.1;Parent=gene-CCO56_RS09265;Dbxref=GenBank:WP_000133994.1;Name=WP_000133994.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=CCO56_RS09265;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000133994.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 129012 130529 . - . ID=gene-CCO56_RS09270;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CCO56_RS09270;old_locus_tag=CCO56_09270 NZ_NPMB01000004.1 Protein Homology CDS 129012 130529 . - 0 ID=cds-WP_000003339.1;Parent=gene-CCO56_RS09270;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=CCO56_RS09270;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 130539 131637 . - . ID=gene-CCO56_RS09275;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CCO56_RS09275;old_locus_tag=CCO56_09275 NZ_NPMB01000004.1 Protein Homology CDS 131563 131637 . - 0 ID=cds-WP_010989230.1;Parent=gene-CCO56_RS09275;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO56_RS09275;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPMB01000004.1 Protein Homology CDS 130539 131561 . - 0 ID=cds-WP_010989230.1;Parent=gene-CCO56_RS09275;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO56_RS09275;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 131742 133475 . - . ID=gene-CCO56_RS09280;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CCO56_RS09280;old_locus_tag=CCO56_09280 NZ_NPMB01000004.1 Protein Homology CDS 131742 133475 . - 0 ID=cds-WP_080176960.1;Parent=gene-CCO56_RS09280;Dbxref=GenBank:WP_080176960.1;Name=WP_080176960.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=CCO56_RS09280;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_080176960.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 133481 134194 . - . ID=gene-CCO56_RS09285;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=CCO56_RS09285;old_locus_tag=CCO56_09285 NZ_NPMB01000004.1 Protein Homology CDS 133481 134194 . - 0 ID=cds-WP_000745614.1;Parent=gene-CCO56_RS09285;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=CCO56_RS09285;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 134218 135114 . - . ID=gene-CCO56_RS09290;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CCO56_RS09290;old_locus_tag=CCO56_09290 NZ_NPMB01000004.1 Protein Homology CDS 134218 135114 . - 0 ID=cds-WP_000434302.1;Parent=gene-CCO56_RS09290;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=CCO56_RS09290;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 135227 135748 . + . ID=gene-CCO56_RS09295;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=CCO56_RS09295;old_locus_tag=CCO56_09295 NZ_NPMB01000004.1 Protein Homology CDS 135227 135748 . + 0 ID=cds-WP_001055885.1;Parent=gene-CCO56_RS09295;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=CCO56_RS09295;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 135801 136214 . - . ID=gene-CCO56_RS09300;Name=CCO56_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09300;old_locus_tag=CCO56_09300 NZ_NPMB01000004.1 Protein Homology CDS 135801 136214 . - 0 ID=cds-WP_000244757.1;Parent=gene-CCO56_RS09300;Dbxref=GenBank:WP_000244757.1;Name=WP_000244757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=CCO56_RS09300;product=protein YgfX;protein_id=WP_000244757.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 136195 136461 . - . ID=gene-CCO56_RS09305;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=CCO56_RS09305;old_locus_tag=CCO56_09305 NZ_NPMB01000004.1 Protein Homology CDS 136195 136461 . - 0 ID=cds-WP_000351186.1;Parent=gene-CCO56_RS09305;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=CCO56_RS09305;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 136711 137691 . + . ID=gene-CCO56_RS09315;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=CCO56_RS09315;old_locus_tag=CCO56_09315 NZ_NPMB01000004.1 Protein Homology CDS 136711 137691 . + 0 ID=cds-WP_000874170.1;Parent=gene-CCO56_RS09315;Dbxref=GenBank:WP_000874170.1;Name=WP_000874170.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=CCO56_RS09315;product=tRNA-modifying protein YgfZ;protein_id=WP_000874170.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 137807 138466 . - . ID=gene-CCO56_RS09325;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CCO56_RS09325;old_locus_tag=CCO56_09325 NZ_NPMB01000004.1 Protein Homology CDS 137807 138466 . - 0 ID=cds-WP_000250289.1;Parent=gene-CCO56_RS09325;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=CCO56_RS09325;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 138630 138941 . - . ID=gene-CCO56_RS09330;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=CCO56_RS09330;old_locus_tag=CCO56_09330 NZ_NPMB01000004.1 Protein Homology CDS 138630 138941 . - 0 ID=cds-WP_001182976.1;Parent=gene-CCO56_RS09330;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=CCO56_RS09330;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 139100 140533 . + . ID=gene-CCO56_RS09335;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=CCO56_RS09335;old_locus_tag=CCO56_09335 NZ_NPMB01000004.1 Protein Homology CDS 139100 140533 . + 0 ID=cds-WP_001230152.1;Parent=gene-CCO56_RS09335;Dbxref=GenBank:WP_001230152.1;Name=WP_001230152.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=CCO56_RS09335;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001230152.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 140581 141474 . - . ID=gene-CCO56_RS09340;Name=CCO56_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09340;old_locus_tag=CCO56_09340 NZ_NPMB01000004.1 Protein Homology CDS 140581 141474 . - 0 ID=cds-WP_000819364.1;Parent=gene-CCO56_RS09340;Dbxref=GenBank:WP_000819364.1;Name=WP_000819364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=CCO56_RS09340;product=transporter;protein_id=WP_000819364.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 141930 144803 . - . ID=gene-CCO56_RS09350;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CCO56_RS09350;old_locus_tag=CCO56_09350 NZ_NPMB01000004.1 Protein Homology CDS 141930 144803 . - 0 ID=cds-WP_076166578.1;Parent=gene-CCO56_RS09350;Dbxref=GenBank:WP_076166578.1;Name=WP_076166578.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=CCO56_RS09350;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_076166578.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 144966 145355 . - . ID=gene-CCO56_RS09355;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CCO56_RS09355;old_locus_tag=CCO56_09355 NZ_NPMB01000004.1 Protein Homology CDS 144966 145355 . - 0 ID=cds-WP_001295377.1;Parent=gene-CCO56_RS09355;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=CCO56_RS09355;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 145381 146475 . - . ID=gene-CCO56_RS09360;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CCO56_RS09360;old_locus_tag=CCO56_09360 NZ_NPMB01000004.1 Protein Homology CDS 145381 146475 . - 0 ID=cds-WP_000068738.1;Parent=gene-CCO56_RS09360;Dbxref=GenBank:WP_000068738.1;Name=WP_000068738.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=CCO56_RS09360;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 146930 148132 . - . ID=gene-CCO56_RS09365;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=CCO56_RS09365;old_locus_tag=CCO56_09365 NZ_NPMB01000004.1 Protein Homology CDS 146930 148132 . - 0 ID=cds-WP_001192144.1;Parent=gene-CCO56_RS09365;Dbxref=GenBank:WP_001192144.1;Name=WP_001192144.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=CCO56_RS09365;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192144.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 148258 149436 . - . ID=gene-CCO56_RS09370;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=CCO56_RS09370;old_locus_tag=CCO56_09370 NZ_NPMB01000004.1 Protein Homology CDS 148258 149436 . - 0 ID=cds-WP_017441087.1;Parent=gene-CCO56_RS09370;Dbxref=GenBank:WP_017441087.1;Name=WP_017441087.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=CCO56_RS09370;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_017441087.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 149433 150749 . - . ID=gene-CCO56_RS09375;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=CCO56_RS09375;old_locus_tag=CCO56_09375 NZ_NPMB01000004.1 Protein Homology CDS 149433 150749 . - 0 ID=cds-WP_000193681.1;Parent=gene-CCO56_RS09375;Dbxref=GenBank:WP_000193681.1;Name=WP_000193681.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=CCO56_RS09375;product=Xaa-Pro aminopeptidase;protein_id=WP_000193681.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 150775 151353 . - . ID=gene-CCO56_RS09380;Name=CCO56_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09380;old_locus_tag=CCO56_09380 NZ_NPMB01000004.1 Protein Homology CDS 150775 151353 . - 0 ID=cds-WP_023993951.1;Parent=gene-CCO56_RS09380;Dbxref=GenBank:WP_023993951.1;Name=WP_023993951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=CCO56_RS09380;product=YecA family protein;protein_id=WP_023993951.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 151520 151849 . + . ID=gene-CCO56_RS09390;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CCO56_RS09390;old_locus_tag=CCO56_09390 NZ_NPMB01000004.1 Protein Homology CDS 151520 151849 . + 0 ID=cds-WP_001276011.1;Parent=gene-CCO56_RS09390;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=CCO56_RS09390;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 151891 152074 . + . ID=gene-CCO56_RS09395;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CCO56_RS09395;old_locus_tag=CCO56_09395 NZ_NPMB01000004.1 cmsearch ncRNA 151891 152074 . + . ID=rna-CCO56_RS09395;Parent=gene-CCO56_RS09395;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS09395;product=6S RNA NZ_NPMB01000004.1 cmsearch exon 151891 152074 . + . ID=exon-CCO56_RS09395-1;Parent=rna-CCO56_RS09395;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS09395;product=6S RNA NZ_NPMB01000004.1 RefSeq gene 152095 152691 . + . ID=gene-CCO56_RS09400;Name=CCO56_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09400;old_locus_tag=CCO56_09400 NZ_NPMB01000004.1 Protein Homology CDS 152095 152691 . + 0 ID=cds-WP_001532573.1;Parent=gene-CCO56_RS09400;Dbxref=GenBank:WP_001532573.1;Name=WP_001532573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=CCO56_RS09400;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_001532573.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 153073 154305 . - . ID=gene-CCO56_RS09405;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CCO56_RS09405;old_locus_tag=CCO56_09405 NZ_NPMB01000004.1 Protein Homology CDS 153073 154305 . - 0 ID=cds-WP_001151627.1;Parent=gene-CCO56_RS09405;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=CCO56_RS09405;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 154572 155231 . - . ID=gene-CCO56_RS09410;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CCO56_RS09410;old_locus_tag=CCO56_09410 NZ_NPMB01000004.1 Protein Homology CDS 154572 155231 . - 0 ID=cds-WP_000189741.1;Parent=gene-CCO56_RS09410;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=CCO56_RS09410;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 155385 156278 . + . ID=gene-CCO56_RS09415;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=CCO56_RS09415;old_locus_tag=CCO56_09415 NZ_NPMB01000004.1 Protein Homology CDS 155385 156278 . + 0 ID=cds-WP_000828345.1;Parent=gene-CCO56_RS09415;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=CCO56_RS09415;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 156544 157290 . - . ID=gene-CCO56_RS09425;Name=CCO56_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09425;old_locus_tag=CCO56_09425 NZ_NPMB01000004.1 Protein Homology CDS 156544 157290 . - 0 ID=cds-WP_000669854.1;Parent=gene-CCO56_RS09425;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=CCO56_RS09425;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 157384 158019 . - . ID=gene-CCO56_RS09430;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=CCO56_RS09430;old_locus_tag=CCO56_09430 NZ_NPMB01000004.1 Protein Homology CDS 157384 158019 . - 0 ID=cds-WP_000626863.1;Parent=gene-CCO56_RS09430;Dbxref=GenBank:WP_000626863.1;Name=WP_000626863.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=CCO56_RS09430;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 158220 159080 . - . ID=gene-CCO56_RS09435;Name=CCO56_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09435;old_locus_tag=CCO56_09435 NZ_NPMB01000004.1 Protein Homology CDS 158220 159080 . - 0 ID=cds-WP_024156673.1;Parent=gene-CCO56_RS09435;Dbxref=GenBank:WP_024156673.1;Name=WP_024156673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=CCO56_RS09435;product=small-conductance mechanosensitive channel MscS;protein_id=WP_024156673.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 159313 160392 . - . ID=gene-CCO56_RS09440;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=CCO56_RS09440;old_locus_tag=CCO56_09440 NZ_NPMB01000004.1 Protein Homology CDS 159313 160392 . - 0 ID=cds-WP_000034386.1;Parent=gene-CCO56_RS09440;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=CCO56_RS09440;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 160494 161657 . - . ID=gene-CCO56_RS09445;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CCO56_RS09445;old_locus_tag=CCO56_09445 NZ_NPMB01000004.1 Protein Homology CDS 160494 161657 . - 0 ID=cds-WP_000111274.1;Parent=gene-CCO56_RS09445;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=CCO56_RS09445;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 161679 162725 . - . ID=gene-CCO56_RS09450;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=CCO56_RS09450;old_locus_tag=CCO56_09450 NZ_NPMB01000004.1 Protein Homology CDS 161679 162725 . - 0 ID=cds-WP_000218338.1;Parent=gene-CCO56_RS09450;Dbxref=GenBank:WP_000218338.1;Name=WP_000218338.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=CCO56_RS09450;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 163099 163524 . + . ID=gene-CCO56_RS09460;Name=CCO56_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09460;old_locus_tag=CCO56_09460 NZ_NPMB01000004.1 Protein Homology CDS 163099 163524 . + 0 ID=cds-WP_023202677.1;Parent=gene-CCO56_RS09460;Dbxref=GenBank:WP_023202677.1;Name=WP_023202677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=CCO56_RS09460;product=PPC domain-containing DNA-binding protein;protein_id=WP_023202677.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 163550 164128 . + . ID=gene-CCO56_RS09465;Name=CCO56_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09465;old_locus_tag=CCO56_09465 NZ_NPMB01000004.1 Protein Homology CDS 163550 164128 . + 0 ID=cds-WP_000124001.1;Parent=gene-CCO56_RS09465;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=CCO56_RS09465;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 164129 164836 . + . ID=gene-CCO56_RS09470;Name=CCO56_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09470;old_locus_tag=CCO56_09470 NZ_NPMB01000004.1 Protein Homology CDS 164129 164836 . + 0 ID=cds-WP_061383815.1;Parent=gene-CCO56_RS09470;Dbxref=GenBank:WP_061383815.1;Name=WP_061383815.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=CCO56_RS09470;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_061383815.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 164824 165501 . + . ID=gene-CCO56_RS09475;Name=CCO56_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09475;old_locus_tag=CCO56_09475 NZ_NPMB01000004.1 Protein Homology CDS 164824 165501 . + 0 ID=cds-WP_001543493.1;Parent=gene-CCO56_RS09475;Dbxref=GenBank:WP_001543493.1;Name=WP_001543493.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=CCO56_RS09475;product=ABC transporter ATP-binding protein;protein_id=WP_001543493.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 165495 166184 . + . ID=gene-CCO56_RS09480;Name=CCO56_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09480;old_locus_tag=CCO56_09480 NZ_NPMB01000004.1 Protein Homology CDS 165495 166184 . + 0 ID=cds-WP_000956933.1;Parent=gene-CCO56_RS09480;Dbxref=GenBank:WP_000956933.1;Name=WP_000956933.1;Ontology_term=GO:0055085,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956937.1;locus_tag=CCO56_RS09480;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000956933.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 166153 166869 . - . ID=gene-CCO56_RS09485;Name=CCO56_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09485;old_locus_tag=CCO56_09485 NZ_NPMB01000004.1 Protein Homology CDS 166153 166869 . - 0 ID=cds-WP_000684837.1;Parent=gene-CCO56_RS09485;Dbxref=GenBank:WP_000684837.1;Name=WP_000684837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406292.1;locus_tag=CCO56_RS09485;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000684837.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 166866 167375 . - . ID=gene-CCO56_RS09490;Name=CCO56_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09490;old_locus_tag=CCO56_09490 NZ_NPMB01000004.1 Protein Homology CDS 166866 167375 . - 0 ID=cds-WP_000209974.1;Parent=gene-CCO56_RS09490;Dbxref=GenBank:WP_000209974.1;Name=WP_000209974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708693.1;locus_tag=CCO56_RS09490;product=MltR family transcriptional regulator;protein_id=WP_000209974.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 167589 168560 . - . ID=gene-CCO56_RS09495;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO56_RS09495;old_locus_tag=CCO56_09495 NZ_NPMB01000004.1 Protein Homology CDS 167589 168560 . - 0 ID=cds-WP_001519647.1;Parent=gene-CCO56_RS09495;Dbxref=GenBank:WP_001519647.1;Name=WP_001519647.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154382.1;locus_tag=CCO56_RS09495;product=class II fructose-bisphosphatase;protein_id=WP_001519647.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 168557 169831 . - . ID=gene-CCO56_RS09500;Name=CCO56_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09500;old_locus_tag=CCO56_09500 NZ_NPMB01000004.1 Protein Homology CDS 168557 169831 . - 0 ID=cds-WP_001528023.1;Parent=gene-CCO56_RS09500;Dbxref=GenBank:WP_001528023.1;Name=WP_001528023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000853171.1;locus_tag=CCO56_RS09500;product=zinc-binding dehydrogenase;protein_id=WP_001528023.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 169855 171234 . - . ID=gene-CCO56_RS09505;Name=CCO56_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09505;old_locus_tag=CCO56_09505 NZ_NPMB01000004.1 Protein Homology CDS 169855 171234 . - 0 ID=cds-WP_000400411.1;Parent=gene-CCO56_RS09505;Dbxref=GenBank:WP_000400411.1;Name=WP_000400411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400412.1;locus_tag=CCO56_RS09505;product=PTS mannitol transporter subunit IICB;protein_id=WP_000400411.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 171262 171705 . - . ID=gene-CCO56_RS09510;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=CCO56_RS09510;old_locus_tag=CCO56_09510 NZ_NPMB01000004.1 Protein Homology CDS 171262 171705 . - 0 ID=cds-WP_001518319.1;Parent=gene-CCO56_RS09510;Dbxref=GenBank:WP_001518319.1;Name=WP_001518319.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518319.1;locus_tag=CCO56_RS09510;product=PTS mannitol transporter subunit IIA;protein_id=WP_001518319.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 172017 174008 . - . ID=gene-CCO56_RS09515;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO56_RS09515;old_locus_tag=CCO56_09515 NZ_NPMB01000004.1 Protein Homology CDS 172017 174008 . - 0 ID=cds-WP_000098648.1;Parent=gene-CCO56_RS09515;Dbxref=GenBank:WP_000098648.1;Name=WP_000098648.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=CCO56_RS09515;product=transketolase;protein_id=WP_000098648.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 174284 175042 . + . ID=gene-CCO56_RS09520;Name=CCO56_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09520;old_locus_tag=CCO56_09520 NZ_NPMB01000004.1 Protein Homology CDS 174284 175042 . + 0 ID=cds-WP_061377831.1;Parent=gene-CCO56_RS09520;Dbxref=GenBank:WP_061377831.1;Name=WP_061377831.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=CCO56_RS09520;product=M48 family metallopeptidase;protein_id=WP_061377831.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 175143 176063 . - . ID=gene-CCO56_RS09525;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=CCO56_RS09525;old_locus_tag=CCO56_09525 NZ_NPMB01000004.1 Protein Homology CDS 175143 176063 . - 0 ID=cds-WP_000105550.1;Parent=gene-CCO56_RS09525;Dbxref=GenBank:WP_000105550.1;Name=WP_000105550.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=CCO56_RS09525;product=agmatinase;protein_id=WP_000105550.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 176292 178268 . - . ID=gene-CCO56_RS09530;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=CCO56_RS09530;old_locus_tag=CCO56_09530 NZ_NPMB01000004.1 Protein Homology CDS 176292 178268 . - 0 ID=cds-WP_001278580.1;Parent=gene-CCO56_RS09530;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=CCO56_RS09530;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 178277 178408 . - . ID=gene-CCO56_RS09535;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=CCO56_RS09535;old_locus_tag=CCO56_09535 NZ_NPMB01000004.1 Protein Homology CDS 178277 178408 . - 0 ID=cds-WP_000729109.1;Parent=gene-CCO56_RS09535;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=CCO56_RS09535;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 178494 178643 . - . ID=gene-CCO56_RS23965;Name=CCO56_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23965 NZ_NPMB01000004.1 Protein Homology CDS 178494 178643 . - 0 ID=cds-WP_001751809.1;Parent=gene-CCO56_RS23965;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=CCO56_RS23965;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 178703 179002 . - . ID=gene-CCO56_RS09545;Name=CCO56_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09545;old_locus_tag=CCO56_09545 NZ_NPMB01000004.1 GeneMarkS-2+ CDS 178703 179002 . - 0 ID=cds-WP_001543499.1;Parent=gene-CCO56_RS09545;Dbxref=GenBank:WP_001543499.1;Name=WP_001543499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS09545;product=hypothetical protein;protein_id=WP_001543499.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 179058 180212 . + . ID=gene-CCO56_RS09550;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CCO56_RS09550;old_locus_tag=CCO56_09550 NZ_NPMB01000004.1 Protein Homology CDS 179058 180212 . + 0 ID=cds-WP_001062140.1;Parent=gene-CCO56_RS09550;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=CCO56_RS09550;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 180705 182099 . + . ID=gene-CCO56_RS09555;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=CCO56_RS09555;old_locus_tag=CCO56_09555 NZ_NPMB01000004.1 Protein Homology CDS 180705 182099 . + 0 ID=cds-WP_001113171.1;Parent=gene-CCO56_RS09555;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=CCO56_RS09555;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 182178 182675 . + . ID=gene-CCO56_RS09560;Name=CCO56_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09560;old_locus_tag=CCO56_09560 NZ_NPMB01000004.1 Protein Homology CDS 182178 182675 . + 0 ID=cds-WP_000856775.1;Parent=gene-CCO56_RS09560;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=CCO56_RS09560;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 182770 183477 . + . ID=gene-CCO56_RS09565;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=CCO56_RS09565;old_locus_tag=CCO56_09565 NZ_NPMB01000004.1 Protein Homology CDS 182770 183477 . + 0 ID=cds-WP_000286124.1;Parent=gene-CCO56_RS09565;Dbxref=GenBank:WP_000286124.1;Name=WP_000286124.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=CCO56_RS09565;product=deoxyribonuclease I;protein_id=WP_000286124.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 183554 184285 . + . ID=gene-CCO56_RS09570;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=CCO56_RS09570;old_locus_tag=CCO56_09570 NZ_NPMB01000004.1 Protein Homology CDS 183554 184285 . + 0 ID=cds-WP_001222488.1;Parent=gene-CCO56_RS09570;Dbxref=GenBank:WP_001222488.1;Name=WP_001222488.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=CCO56_RS09570;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222488.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 184305 185252 . + . ID=gene-CCO56_RS09575;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=CCO56_RS09575;old_locus_tag=CCO56_09575 NZ_NPMB01000004.1 Protein Homology CDS 184305 185252 . + 0 ID=cds-WP_000593248.1;Parent=gene-CCO56_RS09575;Dbxref=GenBank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=CCO56_RS09575;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 185468 186031 . + . ID=gene-CCO56_RS09580;Name=CCO56_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09580;old_locus_tag=CCO56_09580 NZ_NPMB01000004.1 Protein Homology CDS 185468 186031 . + 0 ID=cds-WP_001053171.1;Parent=gene-CCO56_RS09580;Dbxref=GenBank:WP_001053171.1;Name=WP_001053171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=CCO56_RS09580;product=YqgE/AlgH family protein;protein_id=WP_001053171.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 186031 186447 . + . ID=gene-CCO56_RS09585;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CCO56_RS09585;old_locus_tag=CCO56_09585 NZ_NPMB01000004.1 Protein Homology CDS 186031 186447 . + 0 ID=cds-WP_000017096.1;Parent=gene-CCO56_RS09585;Dbxref=GenBank:WP_000017096.1;Name=WP_000017096.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=CCO56_RS09585;product=Holliday junction resolvase RuvX;protein_id=WP_000017096.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 186494 187180 . - . ID=gene-CCO56_RS09590;Name=CCO56_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09590;old_locus_tag=CCO56_09590 NZ_NPMB01000004.1 Protein Homology CDS 186494 187180 . - 0 ID=cds-WP_001607997.1;Parent=gene-CCO56_RS09590;Dbxref=GenBank:WP_001607997.1;Name=WP_001607997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=CCO56_RS09590;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_001607997.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 187312 188292 . - . ID=gene-CCO56_RS09595;Name=CCO56_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09595;old_locus_tag=CCO56_09595 NZ_NPMB01000004.1 Protein Homology CDS 187312 188292 . - 0 ID=cds-WP_023207648.1;Parent=gene-CCO56_RS09595;Dbxref=GenBank:WP_023207648.1;Name=WP_023207648.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=CCO56_RS09595;product=type IV pilus twitching motility protein PilT;protein_id=WP_023207648.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 188310 189014 . + . ID=gene-CCO56_RS09600;Name=CCO56_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09600;old_locus_tag=CCO56_09600 NZ_NPMB01000004.1 Protein Homology CDS 188310 189014 . + 0 ID=cds-WP_000997812.1;Parent=gene-CCO56_RS09600;Dbxref=GenBank:WP_000997812.1;Name=WP_000997812.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=CCO56_RS09600;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997812.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 189033 189599 . + . ID=gene-CCO56_RS09605;Name=CCO56_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09605;old_locus_tag=CCO56_09605 NZ_NPMB01000004.1 Protein Homology CDS 189033 189599 . + 0 ID=cds-WP_001094848.1;Parent=gene-CCO56_RS09605;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=CCO56_RS09605;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 189596 189886 . + . ID=gene-CCO56_RS09610;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=CCO56_RS09610;old_locus_tag=CCO56_09610 NZ_NPMB01000004.1 Protein Homology CDS 189596 189886 . + 0 ID=cds-WP_001277203.1;Parent=gene-CCO56_RS09610;Dbxref=GenBank:WP_001277203.1;Name=WP_001277203.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=CCO56_RS09610;product=DUF167 family protein YggU;protein_id=WP_001277203.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 189894 190487 . + . ID=gene-CCO56_RS09615;Name=CCO56_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09615;old_locus_tag=CCO56_09615 NZ_NPMB01000004.1 Protein Homology CDS 189894 190487 . + 0 ID=cds-WP_023195148.1;Parent=gene-CCO56_RS09615;Dbxref=GenBank:WP_023195148.1;Name=WP_023195148.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=CCO56_RS09615;product=XTP/dITP diphosphatase;protein_id=WP_023195148.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 190480 191616 . + . ID=gene-CCO56_RS09620;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CCO56_RS09620;old_locus_tag=CCO56_09620 NZ_NPMB01000004.1 Protein Homology CDS 190480 191616 . + 0 ID=cds-WP_061377833.1;Parent=gene-CCO56_RS09620;Dbxref=GenBank:WP_061377833.1;Name=WP_061377833.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=CCO56_RS09620;product=radical SAM family heme chaperone HemW;protein_id=WP_061377833.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 191707 192714 . - . ID=gene-CCO56_RS09625;Name=CCO56_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09625;old_locus_tag=CCO56_09625 NZ_NPMB01000004.1 Protein Homology CDS 191707 192714 . - 0 ID=cds-WP_000252200.1;Parent=gene-CCO56_RS09625;Dbxref=GenBank:WP_000252200.1;Name=WP_000252200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=CCO56_RS09625;product=DUF1202 domain-containing protein;protein_id=WP_000252200.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 192847 193893 . - . ID=gene-CCO56_RS09630;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=CCO56_RS09630;old_locus_tag=CCO56_09630 NZ_NPMB01000004.1 Protein Homology CDS 192847 193893 . - 0 ID=cds-WP_000394189.1;Parent=gene-CCO56_RS09630;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=CCO56_RS09630;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 194082 194801 . - . ID=gene-CCO56_RS09635;Name=CCO56_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09635;old_locus_tag=CCO56_09635 NZ_NPMB01000004.1 Protein Homology CDS 194082 194801 . - 0 ID=cds-WP_000984835.1;Parent=gene-CCO56_RS09635;Dbxref=GenBank:WP_000984835.1;Name=WP_000984835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=CCO56_RS09635;product=DUF2884 domain-containing protein;protein_id=WP_000984835.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 194851 195177 . - . ID=gene-CCO56_RS09640;Name=CCO56_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09640;old_locus_tag=CCO56_09640 NZ_NPMB01000004.1 Protein Homology CDS 194851 195177 . - 0 ID=cds-WP_001107559.1;Parent=gene-CCO56_RS09640;Dbxref=GenBank:WP_001107559.1;Name=WP_001107559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=CCO56_RS09640;product=YggL family protein;protein_id=WP_001107559.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 195177 195896 . - . ID=gene-CCO56_RS09645;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CCO56_RS09645;old_locus_tag=CCO56_09645 NZ_NPMB01000004.1 Protein Homology CDS 195177 195896 . - 0 ID=cds-WP_000786893.1;Parent=gene-CCO56_RS09645;Dbxref=GenBank:WP_000786893.1;Name=WP_000786893.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=CCO56_RS09645;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786893.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 196051 197103 . + . ID=gene-CCO56_RS09655;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CCO56_RS09655;old_locus_tag=CCO56_09655 NZ_NPMB01000004.1 Protein Homology CDS 196051 197103 . + 0 ID=cds-WP_001148959.1;Parent=gene-CCO56_RS09655;Dbxref=GenBank:WP_001148959.1;Name=WP_001148959.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=CCO56_RS09655;product=A/G-specific adenine glycosylase;protein_id=WP_001148959.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 197131 197406 . + . ID=gene-CCO56_RS09660;Name=CCO56_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09660;old_locus_tag=CCO56_09660 NZ_NPMB01000004.1 Protein Homology CDS 197131 197406 . + 0 ID=cds-WP_000091706.1;Parent=gene-CCO56_RS09660;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=CCO56_RS09660;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 197519 198604 . + . ID=gene-CCO56_RS09665;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=CCO56_RS09665;old_locus_tag=CCO56_09665 NZ_NPMB01000004.1 Protein Homology CDS 197519 198604 . + 0 ID=cds-WP_000976289.1;Parent=gene-CCO56_RS09665;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=CCO56_RS09665;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 198821 200077 . + . ID=gene-CCO56_RS09670;Name=CCO56_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09670;old_locus_tag=CCO56_09670 NZ_NPMB01000004.1 Protein Homology CDS 198821 200077 . + 0 ID=cds-WP_001049804.1;Parent=gene-CCO56_RS09670;Dbxref=GenBank:WP_001049804.1;Name=WP_001049804.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=CCO56_RS09670;product=nucleoside permease;protein_id=WP_001049804.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 200139 202274 . - . ID=gene-CCO56_RS09675;Name=CCO56_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09675;old_locus_tag=CCO56_09675 NZ_NPMB01000004.1 Protein Homology CDS 200139 202274 . - 0 ID=cds-WP_061377834.1;Parent=gene-CCO56_RS09675;Dbxref=GenBank:WP_061377834.1;Name=WP_061377834.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=CCO56_RS09675;product=ornithine decarboxylase;protein_id=WP_061377834.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 202700 203407 . + . ID=gene-CCO56_RS09685;Name=CCO56_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09685;old_locus_tag=CCO56_09685 NZ_NPMB01000004.1 Protein Homology CDS 202700 203407 . + 0 ID=cds-WP_000234466.1;Parent=gene-CCO56_RS09685;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=CCO56_RS09685;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 203513 203588 . + . ID=gene-CCO56_RS09690;Name=CCO56_RS09690;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS09690;old_locus_tag=CCO56_09690 NZ_NPMB01000004.1 tRNAscan-SE tRNA 203513 203588 . + . ID=rna-CCO56_RS09690;Parent=gene-CCO56_RS09690;anticodon=(pos:203546..203548);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS09690;product=tRNA-Phe NZ_NPMB01000004.1 tRNAscan-SE exon 203513 203588 . + . ID=exon-CCO56_RS09690-1;Parent=rna-CCO56_RS09690;anticodon=(pos:203546..203548);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS09690;product=tRNA-Phe NZ_NPMB01000004.1 RefSeq gene 203747 204127 . - . ID=gene-CCO56_RS09695;Name=CCO56_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09695;old_locus_tag=CCO56_09695 NZ_NPMB01000004.1 Protein Homology CDS 203747 204127 . - 0 ID=cds-WP_000582672.1;Parent=gene-CCO56_RS09695;Dbxref=GenBank:WP_000582672.1;Name=WP_000582672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=CCO56_RS09695;product=VOC family protein;protein_id=WP_000582672.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 204191 205516 . - . ID=gene-CCO56_RS09700;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=CCO56_RS09700;old_locus_tag=CCO56_09700 NZ_NPMB01000004.1 Protein Homology CDS 204191 205516 . - 0 ID=cds-WP_000982331.1;Parent=gene-CCO56_RS09700;Dbxref=GenBank:WP_000982331.1;Name=WP_000982331.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=CCO56_RS09700;product=itaconate CoA-transferase RipA/Ict;protein_id=WP_000982331.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 205541 206068 . - . ID=gene-CCO56_RS09705;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=CCO56_RS09705;old_locus_tag=CCO56_09705 NZ_NPMB01000004.1 Protein Homology CDS 205541 206068 . - 0 ID=cds-WP_001094307.1;Parent=gene-CCO56_RS09705;Dbxref=GenBank:WP_001094307.1;Name=WP_001094307.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=CCO56_RS09705;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=WP_001094307.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 206092 206934 . - . ID=gene-CCO56_RS09710;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=CCO56_RS09710;old_locus_tag=CCO56_09710 NZ_NPMB01000004.1 Protein Homology CDS 206092 206934 . - 0 ID=cds-WP_001112897.1;Parent=gene-CCO56_RS09710;Dbxref=GenBank:WP_001112897.1;Name=WP_001112897.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=CCO56_RS09710;product=itaconate degradation C-C-lyase RipC;protein_id=WP_001112897.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 207026 207904 . + . ID=gene-CCO56_RS09715;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=CCO56_RS09715;old_locus_tag=CCO56_09715 NZ_NPMB01000004.1 Protein Homology CDS 207026 207904 . + 0 ID=cds-WP_061377835.1;Parent=gene-CCO56_RS09715;Dbxref=GenBank:WP_061377835.1;Name=WP_061377835.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=CCO56_RS09715;product=itaconate degradation transcriptional regulator RipR;protein_id=WP_061377835.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 207952 209691 . - . ID=gene-CCO56_RS09720;Name=CCO56_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09720;old_locus_tag=CCO56_09720 NZ_NPMB01000004.1 Protein Homology CDS 207952 209691 . - 0 ID=cds-WP_000745171.1;Parent=gene-CCO56_RS09720;Dbxref=GenBank:WP_000745171.1;Name=WP_000745171.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=CCO56_RS09720;product=arylsulfatase;protein_id=WP_000745171.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 209760 210944 . - . ID=gene-CCO56_RS09725;Name=CCO56_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09725;old_locus_tag=CCO56_09725 NZ_NPMB01000004.1 Protein Homology CDS 209760 210944 . - 0 ID=cds-WP_000933446.1;Parent=gene-CCO56_RS09725;Dbxref=GenBank:WP_000933446.1;Name=WP_000933446.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=CCO56_RS09725;product=anaerobic sulfatase maturase;protein_id=WP_000933446.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 211455 212138 . + . ID=gene-CCO56_RS09730;Name=CCO56_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09730;old_locus_tag=CCO56_09730 NZ_NPMB01000004.1 Protein Homology CDS 211455 212138 . + 0 ID=cds-WP_001275356.1;Parent=gene-CCO56_RS09730;Dbxref=GenBank:WP_001275356.1;Name=WP_001275356.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=CCO56_RS09730;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275356.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 212243 212800 . - . ID=gene-CCO56_RS09735;Name=CCO56_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09735;old_locus_tag=CCO56_09735 NZ_NPMB01000004.1 Protein Homology CDS 212243 212800 . - 0 ID=cds-WP_000100109.1;Parent=gene-CCO56_RS09735;Dbxref=GenBank:WP_000100109.1;Name=WP_000100109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=CCO56_RS09735;product=DUF3156 family protein;protein_id=WP_000100109.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 212778 214277 . - . ID=gene-CCO56_RS09740;Name=CCO56_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09740;old_locus_tag=CCO56_09740 NZ_NPMB01000004.1 Protein Homology CDS 212778 214277 . - 0 ID=cds-WP_000475960.1;Parent=gene-CCO56_RS09740;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=CCO56_RS09740;product=APC family permease;protein_id=WP_000475960.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 214486 214860 . - . ID=gene-CCO56_RS09745;Name=CCO56_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09745;old_locus_tag=CCO56_09745 NZ_NPMB01000004.1 Protein Homology CDS 214486 214860 . - 0 ID=cds-WP_024154915.1;Parent=gene-CCO56_RS09745;Dbxref=GenBank:WP_024154915.1;Name=WP_024154915.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542983.1;locus_tag=CCO56_RS09745;product=cupin domain-containing protein;protein_id=WP_024154915.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 214875 216176 . - . ID=gene-CCO56_RS09750;Name=CCO56_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09750;old_locus_tag=CCO56_09750 NZ_NPMB01000004.1 Protein Homology CDS 214875 216176 . - 0 ID=cds-WP_001092825.1;Parent=gene-CCO56_RS09750;Dbxref=GenBank:WP_001092825.1;Name=WP_001092825.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=CCO56_RS09750;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092825.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 216338 217822 . + . ID=gene-CCO56_RS09755;Name=CCO56_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09755;old_locus_tag=CCO56_09755 NZ_NPMB01000004.1 Protein Homology CDS 216338 217822 . + 0 ID=cds-WP_031566609.1;Parent=gene-CCO56_RS09755;Dbxref=GenBank:WP_031566609.1;Name=WP_031566609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=CCO56_RS09755;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_031566609.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 217958 218338 . - . ID=gene-CCO56_RS09760;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=CCO56_RS09760;old_locus_tag=CCO56_09760 NZ_NPMB01000004.1 Protein Homology CDS 217958 218338 . - 0 ID=cds-WP_001543513.1;Parent=gene-CCO56_RS09760;Dbxref=GenBank:WP_001543513.1;Name=WP_001543513.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=CCO56_RS09760;product=anti-adapter protein IraD;protein_id=WP_001543513.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 218338 218823 . - . ID=gene-CCO56_RS09765;Name=CCO56_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09765;old_locus_tag=CCO56_09765 NZ_NPMB01000004.1 Protein Homology CDS 218338 218823 . - 0 ID=cds-WP_000338753.1;Parent=gene-CCO56_RS09765;Dbxref=GenBank:WP_000338753.1;Name=WP_000338753.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=CCO56_RS09765;product=Hcp family type VI secretion system effector;protein_id=WP_000338753.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 219549 220472 . - . ID=gene-CCO56_RS09770;Name=CCO56_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09770;old_locus_tag=CCO56_09770 NZ_NPMB01000004.1 Protein Homology CDS 219549 220472 . - 0 ID=cds-WP_000540892.1;Parent=gene-CCO56_RS09770;Dbxref=GenBank:WP_000540892.1;Name=WP_000540892.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=CCO56_RS09770;product=polysaccharide deacetylase family protein;protein_id=WP_000540892.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 220511 221389 . - . ID=gene-CCO56_RS09775;Name=CCO56_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09775;old_locus_tag=CCO56_09775 NZ_NPMB01000004.1 Protein Homology CDS 220511 221389 . - 0 ID=cds-WP_000089257.1;Parent=gene-CCO56_RS09775;Dbxref=GenBank:WP_000089257.1;Name=WP_000089257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=CCO56_RS09775;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000089257.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 221702 222298 . - . ID=gene-CCO56_RS09780;Name=CCO56_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09780;old_locus_tag=CCO56_09780 NZ_NPMB01000004.1 Protein Homology CDS 221702 222298 . - 0 ID=cds-WP_000428463.1;Parent=gene-CCO56_RS09780;Dbxref=GenBank:WP_000428463.1;Name=WP_000428463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000428407.1;locus_tag=CCO56_RS09780;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000428463.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 222673 224484 . + . ID=gene-CCO56_RS09785;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=CCO56_RS09785;old_locus_tag=CCO56_09785 NZ_NPMB01000004.1 Protein Homology CDS 222673 224484 . + 0 ID=cds-WP_080176958.1;Parent=gene-CCO56_RS09785;Dbxref=GenBank:WP_080176958.1;Name=WP_080176958.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000945954.1;locus_tag=CCO56_RS09785;product=beta-glucuronidase;protein_id=WP_080176958.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 224481 225854 . + . ID=gene-CCO56_RS09790;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=CCO56_RS09790;old_locus_tag=CCO56_09790 NZ_NPMB01000004.1 Protein Homology CDS 224481 225854 . + 0 ID=cds-WP_080176957.1;Parent=gene-CCO56_RS09790;Dbxref=GenBank:WP_080176957.1;Name=WP_080176957.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=CCO56_RS09790;product=glucuronide transporter;protein_id=WP_080176957.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 225890 227155 . + . ID=gene-CCO56_RS09795;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=CCO56_RS09795;old_locus_tag=CCO56_09795 NZ_NPMB01000004.1 Protein Homology CDS 225890 227155 . + 0 ID=cds-WP_000712675.1;Parent=gene-CCO56_RS09795;Dbxref=GenBank:WP_000712675.1;Name=WP_000712675.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712677.1;locus_tag=CCO56_RS09795;product=glucuronide uptake porin UidC;protein_id=WP_000712675.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 227235 228539 . - . ID=gene-CCO56_RS09800;Name=CCO56_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09800;old_locus_tag=CCO56_09800 NZ_NPMB01000004.1 Protein Homology CDS 227235 228539 . - 0 ID=cds-WP_000784370.1;Parent=gene-CCO56_RS09800;Dbxref=GenBank:WP_000784370.1;Name=WP_000784370.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000784370.1;locus_tag=CCO56_RS09800;product=MFS transporter;protein_id=WP_000784370.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 228944 230128 . + . ID=gene-CCO56_RS09810;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=CCO56_RS09810;old_locus_tag=CCO56_09810 NZ_NPMB01000004.1 Protein Homology CDS 228944 230128 . + 0 ID=cds-WP_000815491.1;Parent=gene-CCO56_RS09810;Dbxref=GenBank:WP_000815491.1;Name=WP_000815491.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=CCO56_RS09810;product=mannonate dehydratase;protein_id=WP_000815491.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 230239 231711 . + . ID=gene-CCO56_RS09815;Name=CCO56_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09815;old_locus_tag=CCO56_09815 NZ_NPMB01000004.1 Protein Homology CDS 230239 231711 . + 0 ID=cds-WP_000437132.1;Parent=gene-CCO56_RS09815;Dbxref=GenBank:WP_000437132.1;Name=WP_000437132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=CCO56_RS09815;product=fructuronate reductase;protein_id=WP_000437132.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 231723 233135 . + . ID=gene-CCO56_RS09820;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=CCO56_RS09820;old_locus_tag=CCO56_09820 NZ_NPMB01000004.1 Protein Homology CDS 231723 233135 . + 0 ID=cds-WP_000190182.1;Parent=gene-CCO56_RS09820;Dbxref=GenBank:WP_000190182.1;Name=WP_000190182.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=CCO56_RS09820;product=glucuronate isomerase;protein_id=WP_000190182.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 233435 234490 . - . ID=gene-CCO56_RS09825;Name=CCO56_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09825;old_locus_tag=CCO56_09825 NZ_NPMB01000004.1 Protein Homology CDS 233435 234490 . - 0 ID=cds-WP_000475253.1;Parent=gene-CCO56_RS09825;Dbxref=GenBank:WP_000475253.1;Name=WP_000475253.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=CCO56_RS09825;product=methyl-accepting chemotaxis protein;protein_id=WP_000475253.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 235149 237005 . - . ID=gene-CCO56_RS09830;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=CCO56_RS09830;old_locus_tag=CCO56_09830 NZ_NPMB01000004.1 Protein Homology CDS 235149 237005 . - 0 ID=cds-WP_000033690.1;Parent=gene-CCO56_RS09830;Dbxref=GenBank:WP_000033690.1;Name=WP_000033690.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=CCO56_RS09830;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033690.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 237232 238098 . + . ID=gene-CCO56_RS09835;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=CCO56_RS09835;old_locus_tag=CCO56_09835 NZ_NPMB01000004.1 Protein Homology CDS 237232 238098 . + 0 ID=cds-WP_000774852.1;Parent=gene-CCO56_RS09835;Dbxref=GenBank:WP_000774852.1;Name=WP_000774852.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=CCO56_RS09835;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774852.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 238166 238876 . - . ID=gene-CCO56_RS09840;Name=CCO56_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09840;old_locus_tag=CCO56_09840 NZ_NPMB01000004.1 Protein Homology CDS 238166 238876 . - 0 ID=cds-WP_001543521.1;Parent=gene-CCO56_RS09840;Dbxref=GenBank:WP_001543521.1;Name=WP_001543521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=CCO56_RS09840;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001543521.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 238876 239928 . - . ID=gene-CCO56_RS09845;Name=CCO56_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09845;old_locus_tag=CCO56_09845 NZ_NPMB01000004.1 Protein Homology CDS 238876 239928 . - 0 ID=cds-WP_001630770.1;Parent=gene-CCO56_RS09845;Dbxref=GenBank:WP_001630770.1;Name=WP_001630770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=CCO56_RS09845;product=ABC transporter substrate-binding protein;protein_id=WP_001630770.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 240004 240252 . - . ID=gene-CCO56_RS09850;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=CCO56_RS09850;old_locus_tag=CCO56_09850 NZ_NPMB01000004.1 Protein Homology CDS 240004 240252 . - 0 ID=cds-WP_000334890.1;Parent=gene-CCO56_RS09850;Dbxref=GenBank:WP_000334890.1;Name=WP_000334890.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=CCO56_RS09850;product=hydrogenase maturation factor HybG;protein_id=WP_000334890.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 240280 240621 . - . ID=gene-CCO56_RS09855;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO56_RS09855;old_locus_tag=CCO56_09855 NZ_NPMB01000004.1 Protein Homology CDS 240280 240621 . - 0 ID=cds-WP_000544945.1;Parent=gene-CCO56_RS09855;Dbxref=GenBank:WP_000544945.1;Name=WP_000544945.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=CCO56_RS09855;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 240614 241102 . - . ID=gene-CCO56_RS09860;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=CCO56_RS09860;old_locus_tag=CCO56_09860 NZ_NPMB01000004.1 Protein Homology CDS 240614 241102 . - 0 ID=cds-WP_000004951.1;Parent=gene-CCO56_RS09860;Dbxref=GenBank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=CCO56_RS09860;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 241095 241589 . - . ID=gene-CCO56_RS09865;Name=CCO56_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09865;old_locus_tag=CCO56_09865 NZ_NPMB01000004.1 Protein Homology CDS 241095 241589 . - 0 ID=cds-WP_001221960.1;Parent=gene-CCO56_RS09865;Dbxref=GenBank:WP_001221960.1;Name=WP_001221960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=CCO56_RS09865;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221960.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 241589 243292 . - . ID=gene-CCO56_RS09870;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=CCO56_RS09870;old_locus_tag=CCO56_09870 NZ_NPMB01000004.1 Protein Homology CDS 241589 243292 . - 0 ID=cds-WP_000083044.1;Parent=gene-CCO56_RS09870;Dbxref=GenBank:WP_000083044.1;Name=WP_000083044.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=CCO56_RS09870;product=hydrogenase 2 large subunit;protein_id=WP_000083044.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 243289 244467 . - . ID=gene-CCO56_RS09875;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=CCO56_RS09875;old_locus_tag=CCO56_09875 NZ_NPMB01000004.1 Protein Homology CDS 243289 244467 . - 0 ID=cds-WP_000017678.1;Parent=gene-CCO56_RS09875;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=CCO56_RS09875;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 244457 245443 . - . ID=gene-CCO56_RS09880;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=CCO56_RS09880;old_locus_tag=CCO56_09880 NZ_NPMB01000004.1 Protein Homology CDS 244457 245443 . - 0 ID=cds-WP_001081721.1;Parent=gene-CCO56_RS09880;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=CCO56_RS09880;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 245446 246564 . - . ID=gene-CCO56_RS09885;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=CCO56_RS09885;old_locus_tag=CCO56_09885 NZ_NPMB01000004.1 Protein Homology CDS 245446 246564 . - 0 ID=cds-WP_000145429.1;Parent=gene-CCO56_RS09885;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=CCO56_RS09885;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 246754 247041 . - . ID=gene-CCO56_RS09895;Name=CCO56_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09895;old_locus_tag=CCO56_09895 NZ_NPMB01000004.1 Protein Homology CDS 246754 247041 . - 0 ID=cds-WP_001059119.1;Parent=gene-CCO56_RS09895;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=CCO56_RS09895;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 247126 248769 . - . ID=gene-CCO56_RS09900;Name=CCO56_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09900;old_locus_tag=CCO56_09900 NZ_NPMB01000004.1 Protein Homology CDS 247126 248769 . - 0 ID=cds-WP_001238427.1;Parent=gene-CCO56_RS09900;Dbxref=GenBank:WP_001238427.1;Name=WP_001238427.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=CCO56_RS09900;product=methyl-accepting chemotaxis protein;protein_id=WP_001238427.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 249076 249570 . - . ID=gene-CCO56_RS09905;Name=CCO56_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09905;old_locus_tag=CCO56_09905 NZ_NPMB01000004.1 Protein Homology CDS 249076 249570 . - 0 ID=cds-WP_000439335.1;Parent=gene-CCO56_RS09905;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=CCO56_RS09905;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 249641 250144 . - . ID=gene-CCO56_RS09910;Name=CCO56_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09910;old_locus_tag=CCO56_09910 NZ_NPMB01000004.1 Protein Homology CDS 249641 250144 . - 0 ID=cds-WP_001084409.1;Parent=gene-CCO56_RS09910;Dbxref=GenBank:WP_001084409.1;Name=WP_001084409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=CCO56_RS09910;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001084409.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 250248 250658 . + . ID=gene-CCO56_RS09915;Name=CCO56_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09915;old_locus_tag=CCO56_09915 NZ_NPMB01000004.1 Protein Homology CDS 250248 250658 . + 0 ID=cds-WP_000936444.1;Parent=gene-CCO56_RS09915;Dbxref=GenBank:WP_000936444.1;Name=WP_000936444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=CCO56_RS09915;product=hypothetical protein;protein_id=WP_000936444.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 250645 251049 . + . ID=gene-CCO56_RS09920;Name=CCO56_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09920;old_locus_tag=CCO56_09920 NZ_NPMB01000004.1 Protein Homology CDS 250645 251049 . + 0 ID=cds-WP_000665657.1;Parent=gene-CCO56_RS09920;Dbxref=GenBank:WP_000665657.1;Name=WP_000665657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=CCO56_RS09920;product=hypothetical protein;protein_id=WP_000665657.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 251173 252057 . + . ID=gene-CCO56_RS09925;Name=CCO56_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09925;old_locus_tag=CCO56_09925 NZ_NPMB01000004.1 Protein Homology CDS 251173 252057 . + 0 ID=cds-WP_000019032.1;Parent=gene-CCO56_RS09925;Dbxref=GenBank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=CCO56_RS09925;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 252170 252595 . - . ID=gene-CCO56_RS09930;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=CCO56_RS09930;old_locus_tag=CCO56_09930 NZ_NPMB01000004.1 Protein Homology CDS 252170 252595 . - 0 ID=cds-WP_001527939.1;Parent=gene-CCO56_RS09930;Dbxref=GenBank:WP_001527939.1;Name=WP_001527939.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=CCO56_RS09930;product=TonB system transport protein ExbD;protein_id=WP_001527939.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 252602 253336 . - . ID=gene-CCO56_RS09935;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=CCO56_RS09935;old_locus_tag=CCO56_09935 NZ_NPMB01000004.1 Protein Homology CDS 252602 253336 . - 0 ID=cds-WP_000527859.1;Parent=gene-CCO56_RS09935;Dbxref=GenBank:WP_000527859.1;Name=WP_000527859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=CCO56_RS09935;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527859.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 253588 254775 . + . ID=gene-CCO56_RS09945;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CCO56_RS09945;old_locus_tag=CCO56_09945 NZ_NPMB01000004.1 Protein Homology CDS 253588 254775 . + 0 ID=cds-WP_080176956.1;Parent=gene-CCO56_RS09945;Dbxref=GenBank:WP_080176956.1;Name=WP_080176956.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=CCO56_RS09945;product=cystathionine beta-lyase;protein_id=WP_080176956.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 254915 255574 . + . ID=gene-CCO56_RS09950;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=CCO56_RS09950;old_locus_tag=CCO56_09950 NZ_NPMB01000004.1 Protein Homology CDS 254915 255574 . + 0 ID=cds-WP_000268441.1;Parent=gene-CCO56_RS09950;Dbxref=GenBank:WP_000268441.1;Name=WP_000268441.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=CCO56_RS09950;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268441.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 255638 256537 . - . ID=gene-CCO56_RS09955;Name=CCO56_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09955;old_locus_tag=CCO56_09955 NZ_NPMB01000004.1 Protein Homology CDS 255638 256537 . - 0 ID=cds-WP_001078198.1;Parent=gene-CCO56_RS09955;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=CCO56_RS09955;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 256730 257893 . + . ID=gene-CCO56_RS09960;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=CCO56_RS09960;old_locus_tag=CCO56_09960 NZ_NPMB01000004.1 Protein Homology CDS 256730 257893 . + 0 ID=cds-WP_023226117.1;Parent=gene-CCO56_RS09960;Dbxref=GenBank:WP_023226117.1;Name=WP_023226117.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=CCO56_RS09960;product=alcohol dehydrogenase;protein_id=WP_023226117.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 257999 258826 . + . ID=gene-CCO56_RS09965;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=CCO56_RS09965;old_locus_tag=CCO56_09965 NZ_NPMB01000004.1 Protein Homology CDS 257999 258826 . + 0 ID=cds-WP_000013100.1;Parent=gene-CCO56_RS09965;Dbxref=GenBank:WP_000013100.1;Name=WP_000013100.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=CCO56_RS09965;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013100.1;transl_table=11 NZ_NPMB01000004.1 RefSeq pseudogene 258992 260477 . + . ID=gene-CCO56_RS09970;Name=CCO56_RS09970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS09970;old_locus_tag=CCO56_09970;pseudo=true NZ_NPMB01000004.1 Protein Homology CDS 258992 260477 . + 0 ID=cds-CCO56_RS09970;Parent=gene-CCO56_RS09970;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=CCO56_RS09970;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 260522 260977 . + . ID=gene-CCO56_RS09975;Name=CCO56_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09975;old_locus_tag=CCO56_09975 NZ_NPMB01000004.1 Protein Homology CDS 260522 260977 . + 0 ID=cds-WP_000128242.1;Parent=gene-CCO56_RS09975;Dbxref=GenBank:WP_000128242.1;Name=WP_000128242.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=CCO56_RS09975;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 261113 263284 . - . ID=gene-CCO56_RS09980;Name=CCO56_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09980;old_locus_tag=CCO56_09980 NZ_NPMB01000004.1 Protein Homology CDS 261113 263284 . - 0 ID=cds-WP_094882044.1;Parent=gene-CCO56_RS09980;Dbxref=GenBank:WP_094882044.1;Name=WP_094882044.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=CCO56_RS09980;product=YgiQ family radical SAM protein;protein_id=WP_094882044.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 263419 264840 . - . ID=gene-CCO56_RS09985;Name=CCO56_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09985;old_locus_tag=CCO56_09985 NZ_NPMB01000004.1 Protein Homology CDS 263419 264840 . - 0 ID=cds-WP_023213916.1;Parent=gene-CCO56_RS09985;Dbxref=GenBank:WP_023213916.1;Name=WP_023213916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528005.1;locus_tag=CCO56_RS09985;product=DUF4459 domain-containing protein;protein_id=WP_023213916.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 264905 265999 . - . ID=gene-CCO56_RS09990;Name=CCO56_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS09990;old_locus_tag=CCO56_09990 NZ_NPMB01000004.1 GeneMarkS-2+ CDS 264905 265999 . - 0 ID=cds-WP_237219585.1;Parent=gene-CCO56_RS09990;Dbxref=GenBank:WP_237219585.1;Name=WP_237219585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS09990;product=hypothetical protein;protein_id=WP_237219585.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 265972 266313 . - . ID=gene-CCO56_RS23790;Name=CCO56_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23790 NZ_NPMB01000004.1 GeneMarkS-2+ CDS 265972 266313 . - 0 ID=cds-WP_237219586.1;Parent=gene-CCO56_RS23790;Dbxref=GenBank:WP_237219586.1;Name=WP_237219586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS23790;product=hypothetical protein;protein_id=WP_237219586.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 266329 267234 . - . ID=gene-CCO56_RS24005;Name=CCO56_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24005 NZ_NPMB01000004.1 Protein Homology CDS 266329 267234 . - 0 ID=cds-WP_223202024.1;Parent=gene-CCO56_RS24005;Dbxref=GenBank:WP_223202024.1;Name=WP_223202024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269658.1;locus_tag=CCO56_RS24005;product=hypothetical protein;protein_id=WP_223202024.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 268093 268845 . - . ID=gene-CCO56_RS10000;Name=CCO56_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10000;old_locus_tag=CCO56_10000 NZ_NPMB01000004.1 Protein Homology CDS 268093 268845 . - 0 ID=cds-WP_080176954.1;Parent=gene-CCO56_RS10000;Dbxref=GenBank:WP_080176954.1;Name=WP_080176954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222780.1;locus_tag=CCO56_RS10000;product=hypothetical protein;protein_id=WP_080176954.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 268866 270278 . - . ID=gene-CCO56_RS10005;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=CCO56_RS10005;old_locus_tag=CCO56_10005 NZ_NPMB01000004.1 Protein Homology CDS 268866 270278 . - 0 ID=cds-WP_000010658.1;Parent=gene-CCO56_RS10005;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=CCO56_RS10005;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 270352 271089 . - . ID=gene-CCO56_RS10010;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=CCO56_RS10010;old_locus_tag=CCO56_10010 NZ_NPMB01000004.1 Protein Homology CDS 270352 271089 . - 0 ID=cds-WP_000965733.1;Parent=gene-CCO56_RS10010;Dbxref=GenBank:WP_000965733.1;Name=WP_000965733.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=CCO56_RS10010;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965733.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 271346 273604 . - . ID=gene-CCO56_RS10015;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CCO56_RS10015;old_locus_tag=CCO56_10015 NZ_NPMB01000004.1 Protein Homology CDS 271346 273604 . - 0 ID=cds-WP_061377841.1;Parent=gene-CCO56_RS10015;Dbxref=GenBank:WP_061377841.1;Name=WP_061377841.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=CCO56_RS10015;product=DNA topoisomerase IV subunit A;protein_id=WP_061377841.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 273734 274126 . - . ID=gene-CCO56_RS10020;Name=CCO56_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10020;old_locus_tag=CCO56_10020 NZ_NPMB01000004.1 Protein Homology CDS 273734 274126 . - 0 ID=cds-WP_000731553.1;Parent=gene-CCO56_RS10020;Dbxref=GenBank:WP_000731553.1;Name=WP_000731553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024544.1;locus_tag=CCO56_RS10020;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731553.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 274278 274937 . + . ID=gene-CCO56_RS10025;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=CCO56_RS10025;old_locus_tag=CCO56_10025 NZ_NPMB01000004.1 Protein Homology CDS 274278 274937 . + 0 ID=cds-WP_080176953.1;Parent=gene-CCO56_RS10025;Dbxref=GenBank:WP_080176953.1;Name=WP_080176953.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=CCO56_RS10025;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_080176953.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 274934 276283 . + . ID=gene-CCO56_RS10030;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=CCO56_RS10030;old_locus_tag=CCO56_10030 NZ_NPMB01000004.1 Protein Homology CDS 274934 276283 . + 0 ID=cds-WP_000779333.1;Parent=gene-CCO56_RS10030;Dbxref=GenBank:WP_000779333.1;Name=WP_000779333.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=CCO56_RS10030;product=quorum sensing histidine kinase QseC;protein_id=WP_000779333.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 276390 276971 . + . ID=gene-CCO56_RS10035;Name=CCO56_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10035;old_locus_tag=CCO56_10035 NZ_NPMB01000004.1 Protein Homology CDS 276390 276971 . + 0 ID=cds-WP_000065416.1;Parent=gene-CCO56_RS10035;Dbxref=GenBank:WP_000065416.1;Name=WP_000065416.1;Ontology_term=GO:0008753,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=CCO56_RS10035;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 277003 277317 . + . ID=gene-CCO56_RS10040;Name=CCO56_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10040;old_locus_tag=CCO56_10040 NZ_NPMB01000004.1 Protein Homology CDS 277003 277317 . + 0 ID=cds-WP_000958587.1;Parent=gene-CCO56_RS10040;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=CCO56_RS10040;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 277442 279334 . - . ID=gene-CCO56_RS10045;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CCO56_RS10045;old_locus_tag=CCO56_10045 NZ_NPMB01000004.1 Protein Homology CDS 277442 279334 . - 0 ID=cds-WP_023262778.1;Parent=gene-CCO56_RS10045;Dbxref=GenBank:WP_023262778.1;Name=WP_023262778.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=CCO56_RS10045;product=DNA topoisomerase IV subunit B;protein_id=WP_023262778.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 279362 279943 . - . ID=gene-CCO56_RS10050;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=CCO56_RS10050;old_locus_tag=CCO56_10050 NZ_NPMB01000004.1 Protein Homology CDS 279362 279943 . - 0 ID=cds-WP_000105725.1;Parent=gene-CCO56_RS10050;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=CCO56_RS10050;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 279943 280770 . - . ID=gene-CCO56_RS10055;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=CCO56_RS10055;old_locus_tag=CCO56_10055 NZ_NPMB01000004.1 Protein Homology CDS 279943 280770 . - 0 ID=cds-WP_000444735.1;Parent=gene-CCO56_RS10055;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=CCO56_RS10055;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 280795 281217 . - . ID=gene-CCO56_RS10060;Name=CCO56_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10060;old_locus_tag=CCO56_10060 NZ_NPMB01000004.1 Protein Homology CDS 280795 281217 . - 0 ID=cds-WP_000833404.1;Parent=gene-CCO56_RS10060;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=CCO56_RS10060;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 281214 281846 . - . ID=gene-CCO56_RS10065;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=CCO56_RS10065;old_locus_tag=CCO56_10065 NZ_NPMB01000004.1 Protein Homology CDS 281214 281846 . - 0 ID=cds-WP_001231950.1;Parent=gene-CCO56_RS10065;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=CCO56_RS10065;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 282047 283522 . + . ID=gene-CCO56_RS10070;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=CCO56_RS10070;old_locus_tag=CCO56_10070 NZ_NPMB01000004.1 Protein Homology CDS 282047 283522 . + 0 ID=cds-WP_001663008.1;Parent=gene-CCO56_RS10070;Dbxref=GenBank:WP_001663008.1;Name=WP_001663008.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=CCO56_RS10070;product=outer membrane channel protein TolC;protein_id=WP_001663008.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 283735 284406 . + . ID=gene-CCO56_RS10080;Name=CCO56_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10080;old_locus_tag=CCO56_10080 NZ_NPMB01000004.1 Protein Homology CDS 283735 284406 . + 0 ID=cds-WP_000831528.1;Parent=gene-CCO56_RS10080;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=CCO56_RS10080;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 284412 285575 . + . ID=gene-CCO56_RS10085;Name=CCO56_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10085;old_locus_tag=CCO56_10085 NZ_NPMB01000004.1 Protein Homology CDS 284412 285575 . + 0 ID=cds-WP_000442833.1;Parent=gene-CCO56_RS10085;Dbxref=GenBank:WP_000442833.1;Name=WP_000442833.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=CCO56_RS10085;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 285637 286425 . - . ID=gene-CCO56_RS10090;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=CCO56_RS10090;old_locus_tag=CCO56_10090 NZ_NPMB01000004.1 Protein Homology CDS 285637 286425 . - 0 ID=cds-WP_001520560.1;Parent=gene-CCO56_RS10090;Dbxref=GenBank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=CCO56_RS10090;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001520560.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 286566 287339 . + . ID=gene-CCO56_RS10095;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=CCO56_RS10095;old_locus_tag=CCO56_10095 NZ_NPMB01000004.1 Protein Homology CDS 286566 287339 . + 0 ID=cds-WP_000115874.1;Parent=gene-CCO56_RS10095;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=CCO56_RS10095;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 287406 287582 . - . ID=gene-CCO56_RS23970;Name=CCO56_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23970;old_locus_tag=CCO56_10100 NZ_NPMB01000004.1 Protein Homology CDS 287406 287582 . - 0 ID=cds-WP_000469257.1;Parent=gene-CCO56_RS23970;Dbxref=GenBank:WP_000469257.1;Name=WP_000469257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=CCO56_RS23970;product=hypothetical protein;protein_id=WP_000469257.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 287982 289778 . + . ID=gene-CCO56_RS10105;Name=CCO56_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10105;old_locus_tag=CCO56_10105 NZ_NPMB01000004.1 Protein Homology CDS 287982 289778 . + 0 ID=cds-WP_000460265.1;Parent=gene-CCO56_RS10105;Dbxref=GenBank:WP_000460265.1;Name=WP_000460265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=CCO56_RS10105;product=aryl-sulfate sulfotransferase;protein_id=WP_000460265.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 289798 290469 . + . ID=gene-CCO56_RS10110;Name=CCO56_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10110;old_locus_tag=CCO56_10110 NZ_NPMB01000004.1 Protein Homology CDS 289798 290469 . + 0 ID=cds-WP_000096230.1;Parent=gene-CCO56_RS10110;Dbxref=GenBank:WP_000096230.1;Name=WP_000096230.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=CCO56_RS10110;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 290484 291161 . + . ID=gene-CCO56_RS10115;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=CCO56_RS10115;old_locus_tag=CCO56_10115 NZ_NPMB01000004.1 Protein Homology CDS 290484 291161 . + 0 ID=cds-WP_000345576.1;Parent=gene-CCO56_RS10115;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=CCO56_RS10115;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 291332 291985 . - . ID=gene-CCO56_RS10120;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=CCO56_RS10120;old_locus_tag=CCO56_10120 NZ_NPMB01000004.1 Protein Homology CDS 291332 291985 . - 0 ID=cds-WP_001076978.1;Parent=gene-CCO56_RS10120;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=CCO56_RS10120;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11 NZ_NPMB01000004.1 cmsearch riboswitch 292091 292289 . - . ID=id-NZ_NPMB01000004.1:292091..292289;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMB01000004.1 RefSeq gene 292422 292718 . + . ID=gene-CCO56_RS10125;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=CCO56_RS10125;old_locus_tag=CCO56_10125 NZ_NPMB01000004.1 Protein Homology CDS 292422 292718 . + 0 ID=cds-WP_000566824.1;Parent=gene-CCO56_RS10125;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=CCO56_RS10125;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 292792 293001 . - . ID=gene-CCO56_RS10130;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=CCO56_RS10130;old_locus_tag=CCO56_10130 NZ_NPMB01000004.1 Protein Homology CDS 292792 293001 . - 0 ID=cds-WP_000928927.1;Parent=gene-CCO56_RS10130;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=CCO56_RS10130;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 293259 293879 . + . ID=gene-CCO56_RS10135;Name=CCO56_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10135;old_locus_tag=CCO56_10135 NZ_NPMB01000004.1 Protein Homology CDS 293259 293879 . + 0 ID=cds-WP_061377842.1;Parent=gene-CCO56_RS10135;Dbxref=GenBank:WP_061377842.1;Name=WP_061377842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=CCO56_RS10135;product=OB-fold-containig protein;protein_id=WP_061377842.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 293898 295577 . + . ID=gene-CCO56_RS10140;Name=CCO56_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10140;old_locus_tag=CCO56_10140 NZ_NPMB01000004.1 Protein Homology CDS 293898 295577 . + 0 ID=cds-WP_061377844.1;Parent=gene-CCO56_RS10140;Dbxref=GenBank:WP_061377844.1;Name=WP_061377844.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=CCO56_RS10140;product=flotillin family protein;protein_id=WP_061377844.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 295817 295876 . + . ID=gene-CCO56_RS23590;Name=CCO56_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23590 NZ_NPMB01000004.1 Protein Homology CDS 295817 295876 . + 0 ID=cds-WP_111754053.1;Parent=gene-CCO56_RS23590;Dbxref=GenBank:WP_111754053.1;Name=WP_111754053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=CCO56_RS23590;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_111754053.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 296036 297469 . - . ID=gene-CCO56_RS10150;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=CCO56_RS10150;old_locus_tag=CCO56_10150 NZ_NPMB01000004.1 Protein Homology CDS 296036 297469 . - 0 ID=cds-WP_000867680.1;Parent=gene-CCO56_RS10150;Dbxref=GenBank:WP_000867680.1;Name=WP_000867680.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=CCO56_RS10150;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867680.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 297517 300360 . - . ID=gene-CCO56_RS10155;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=CCO56_RS10155;old_locus_tag=CCO56_10155 NZ_NPMB01000004.1 Protein Homology CDS 297517 300360 . - 0 ID=cds-WP_061377846.1;Parent=gene-CCO56_RS10155;Dbxref=GenBank:WP_061377846.1;Name=WP_061377846.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=CCO56_RS10155;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_061377846.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 300478 301779 . - . ID=gene-CCO56_RS10160;Name=CCO56_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10160;old_locus_tag=CCO56_10160 NZ_NPMB01000004.1 Protein Homology CDS 300478 301779 . - 0 ID=cds-WP_061377848.1;Parent=gene-CCO56_RS10160;Dbxref=GenBank:WP_061377848.1;Name=WP_061377848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=CCO56_RS10160;product=inorganic triphosphatase;protein_id=WP_061377848.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 302021 302635 . + . ID=gene-CCO56_RS10165;Name=CCO56_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10165;old_locus_tag=CCO56_10165 NZ_NPMB01000004.1 Protein Homology CDS 302021 302635 . + 0 ID=cds-WP_001125344.1;Parent=gene-CCO56_RS10165;Dbxref=GenBank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=CCO56_RS10165;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 302698 303939 . + . ID=gene-CCO56_RS10170;Name=CCO56_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10170;old_locus_tag=CCO56_10170 NZ_NPMB01000004.1 Protein Homology CDS 302698 303939 . + 0 ID=cds-WP_000708454.1;Parent=gene-CCO56_RS10170;Dbxref=GenBank:WP_000708454.1;Name=WP_000708454.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=CCO56_RS10170;product=multifunctional CCA addition/repair protein;protein_id=WP_000708454.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 304044 304865 . - . ID=gene-CCO56_RS10175;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=CCO56_RS10175;old_locus_tag=CCO56_10175 NZ_NPMB01000004.1 Protein Homology CDS 304044 304865 . - 0 ID=cds-WP_001281933.1;Parent=gene-CCO56_RS10175;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=CCO56_RS10175;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 304963 305322 . - . ID=gene-CCO56_RS10180;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CCO56_RS10180;old_locus_tag=CCO56_10180 NZ_NPMB01000004.1 Protein Homology CDS 304963 305322 . - 0 ID=cds-WP_000355776.1;Parent=gene-CCO56_RS10180;Dbxref=GenBank:WP_000355776.1;Name=WP_000355776.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=CCO56_RS10180;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_000355776.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 305429 306046 . + . ID=gene-CCO56_RS10185;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CCO56_RS10185;old_locus_tag=CCO56_10185 NZ_NPMB01000004.1 Protein Homology CDS 305429 306046 . + 0 ID=cds-WP_001272785.1;Parent=gene-CCO56_RS10185;Dbxref=GenBank:WP_001272785.1;Name=WP_001272785.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272785.1;locus_tag=CCO56_RS10185;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272785.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 306270 307283 . - . ID=gene-CCO56_RS10195;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CCO56_RS10195;old_locus_tag=CCO56_10195 NZ_NPMB01000004.1 Protein Homology CDS 306270 307283 . - 0 ID=cds-WP_001264389.1;Parent=gene-CCO56_RS10195;Dbxref=GenBank:WP_001264389.1;Name=WP_001264389.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=CCO56_RS10195;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264389.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 307511 307726 . + . ID=gene-CCO56_RS10200;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CCO56_RS10200;old_locus_tag=CCO56_10200 NZ_NPMB01000004.1 Protein Homology CDS 307511 307726 . + 0 ID=cds-WP_001144069.1;Parent=gene-CCO56_RS10200;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=CCO56_RS10200;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 307962 309707 . + . ID=gene-CCO56_RS10205;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CCO56_RS10205;old_locus_tag=CCO56_10205 NZ_NPMB01000004.1 Protein Homology CDS 307962 309707 . + 0 ID=cds-WP_000918862.1;Parent=gene-CCO56_RS10205;Dbxref=GenBank:WP_000918862.1;Name=WP_000918862.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=CCO56_RS10205;product=DNA primase;protein_id=WP_000918862.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 309722 311704 . + . ID=gene-CCO56_RS10210;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CCO56_RS10210;old_locus_tag=CCO56_10210 NZ_NPMB01000004.1 Protein Homology CDS 309722 311704 . + 0 ID=cds-WP_001120159.1;Parent=gene-CCO56_RS10210;Dbxref=GenBank:WP_001120159.1;Name=WP_001120159.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=CCO56_RS10210;product=RNA polymerase sigma factor RpoD;protein_id=WP_001120159.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 311828 312334 . - . ID=gene-CCO56_RS10215;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=CCO56_RS10215;old_locus_tag=CCO56_10215 NZ_NPMB01000004.1 Protein Homology CDS 311828 312334 . - 0 ID=cds-WP_000237776.1;Parent=gene-CCO56_RS10215;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=CCO56_RS10215;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 312460 312535 . + . ID=gene-CCO56_RS10220;Name=CCO56_RS10220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS10220;old_locus_tag=CCO56_10220 NZ_NPMB01000004.1 tRNAscan-SE tRNA 312460 312535 . + . ID=rna-CCO56_RS10220;Parent=gene-CCO56_RS10220;anticodon=(pos:312493..312495);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS10220;product=tRNA-Ile NZ_NPMB01000004.1 tRNAscan-SE exon 312460 312535 . + . ID=exon-CCO56_RS10220-1;Parent=rna-CCO56_RS10220;anticodon=(pos:312493..312495);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS10220;product=tRNA-Ile NZ_NPMB01000004.1 RefSeq gene 312615 313382 . - . ID=gene-CCO56_RS10225;Name=CCO56_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10225;old_locus_tag=CCO56_10225 NZ_NPMB01000004.1 Protein Homology CDS 312615 313382 . - 0 ID=cds-WP_023233420.1;Parent=gene-CCO56_RS10225;Dbxref=GenBank:WP_023233420.1;Name=WP_023233420.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=CCO56_RS10225;product=siderophore-interacting protein;protein_id=WP_023233420.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 313614 314261 . + . ID=gene-CCO56_RS10230;Name=CCO56_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10230;old_locus_tag=CCO56_10230 NZ_NPMB01000004.1 Protein Homology CDS 313614 314261 . + 0 ID=cds-WP_000983434.1;Parent=gene-CCO56_RS10230;Dbxref=GenBank:WP_000983434.1;Name=WP_000983434.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=CCO56_RS10230;product=PadR family transcriptional regulator;protein_id=WP_000983434.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 314258 315826 . - . ID=gene-CCO56_RS10235;Name=CCO56_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10235;old_locus_tag=CCO56_10235 NZ_NPMB01000004.1 Protein Homology CDS 314258 315826 . - 0 ID=cds-WP_000478462.1;Parent=gene-CCO56_RS10235;Dbxref=GenBank:WP_000478462.1;Name=WP_000478462.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=CCO56_RS10235;product=methyl-accepting chemotaxis protein;protein_id=WP_000478462.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 316214 317734 . - . ID=gene-CCO56_RS10240;Name=CCO56_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10240;old_locus_tag=CCO56_10240 NZ_NPMB01000004.1 Protein Homology CDS 316214 317734 . - 0 ID=cds-WP_001582503.1;Parent=gene-CCO56_RS10240;Dbxref=GenBank:WP_001582503.1;Name=WP_001582503.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=CCO56_RS10240;product=methyl-accepting chemotaxis protein;protein_id=WP_001582503.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 318164 319543 . + . ID=gene-CCO56_RS10250;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=CCO56_RS10250;old_locus_tag=CCO56_10250 NZ_NPMB01000004.1 Protein Homology CDS 318164 319543 . + 0 ID=cds-WP_001520281.1;Parent=gene-CCO56_RS10250;Dbxref=GenBank:WP_001520281.1;Name=WP_001520281.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=CCO56_RS10250;product=putrescine aminotransferase;protein_id=WP_001520281.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 319714 321732 . + . ID=gene-CCO56_RS10255;Name=CCO56_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10255;old_locus_tag=CCO56_10255 NZ_NPMB01000004.1 Protein Homology CDS 319714 321732 . + 0 ID=cds-WP_000121524.1;Parent=gene-CCO56_RS10255;Dbxref=GenBank:WP_000121524.1;Name=WP_000121524.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=CCO56_RS10255;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121524.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 321813 322949 . - . ID=gene-CCO56_RS10260;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=CCO56_RS10260;old_locus_tag=CCO56_10260 NZ_NPMB01000004.1 Protein Homology CDS 321813 322949 . - 0 ID=cds-WP_000019989.1;Parent=gene-CCO56_RS10260;Dbxref=GenBank:WP_000019989.1;Name=WP_000019989.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=CCO56_RS10260;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019989.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 323035 323532 . + . ID=gene-CCO56_RS10265;Name=CCO56_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10265;old_locus_tag=CCO56_10265 NZ_NPMB01000004.1 Protein Homology CDS 323035 323532 . + 0 ID=cds-WP_000202969.1;Parent=gene-CCO56_RS10265;Dbxref=GenBank:WP_000202969.1;Name=WP_000202969.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=CCO56_RS10265;product=M48 family metallopeptidase;protein_id=WP_000202969.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 323684 324376 . + . ID=gene-CCO56_RS10270;Name=CCO56_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10270;old_locus_tag=CCO56_10270 NZ_NPMB01000004.1 Protein Homology CDS 323684 324376 . + 0 ID=cds-WP_000951046.1;Parent=gene-CCO56_RS10270;Dbxref=GenBank:WP_000951046.1;Name=WP_000951046.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=CCO56_RS10270;product=SanA/YdcF family protein;protein_id=WP_000951046.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 324464 325462 . + . ID=gene-CCO56_RS10275;Name=CCO56_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10275;old_locus_tag=CCO56_10275 NZ_NPMB01000004.1 Protein Homology CDS 324464 325462 . + 0 ID=cds-WP_000617682.1;Parent=gene-CCO56_RS10275;Dbxref=GenBank:WP_000617682.1;Name=WP_000617682.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=CCO56_RS10275;product=Gfo/Idh/MocA family protein;protein_id=WP_000617682.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 325733 326701 . + . ID=gene-CCO56_RS10280;Name=CCO56_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10280;old_locus_tag=CCO56_10280 NZ_NPMB01000004.1 Protein Homology CDS 325733 326701 . + 0 ID=cds-WP_001098836.1;Parent=gene-CCO56_RS10280;Dbxref=GenBank:WP_001098836.1;Name=WP_001098836.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=CCO56_RS10280;product=TerC family protein;protein_id=WP_001098836.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 326956 328200 . + . ID=gene-CCO56_RS10285;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=CCO56_RS10285;old_locus_tag=CCO56_10285 NZ_NPMB01000004.1 Protein Homology CDS 326956 328200 . + 0 ID=cds-WP_000235360.1;Parent=gene-CCO56_RS10285;Dbxref=GenBank:WP_000235360.1;Name=WP_000235360.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=CCO56_RS10285;product=serine/threonine transporter SstT;protein_id=WP_000235360.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 328650 329312 . + . ID=gene-CCO56_RS10295;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=CCO56_RS10295;old_locus_tag=CCO56_10295 NZ_NPMB01000004.1 Protein Homology CDS 328650 329312 . + 0 ID=cds-WP_000422141.1;Parent=gene-CCO56_RS10295;Dbxref=GenBank:WP_000422141.1;Name=WP_000422141.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=CCO56_RS10295;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422141.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 329316 329699 . + . ID=gene-CCO56_RS10300;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=CCO56_RS10300;old_locus_tag=CCO56_10300 NZ_NPMB01000004.1 Protein Homology CDS 329316 329699 . + 0 ID=cds-WP_000917516.1;Parent=gene-CCO56_RS10300;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=CCO56_RS10300;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 329844 330212 . + . ID=gene-CCO56_RS10305;Name=CCO56_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10305;old_locus_tag=CCO56_10305 NZ_NPMB01000004.1 Protein Homology CDS 329844 330212 . + 0 ID=cds-WP_000877297.1;Parent=gene-CCO56_RS10305;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=CCO56_RS10305;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 330254 330559 . + . ID=gene-CCO56_RS10310;Name=CCO56_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10310;old_locus_tag=CCO56_10310 NZ_NPMB01000004.1 Protein Homology CDS 330254 330559 . + 0 ID=cds-WP_000031219.1;Parent=gene-CCO56_RS10310;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=CCO56_RS10310;product=DUF883 family protein;protein_id=WP_000031219.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 330562 330960 . + . ID=gene-CCO56_RS10315;Name=CCO56_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10315;old_locus_tag=CCO56_10315 NZ_NPMB01000004.1 Protein Homology CDS 330562 330960 . + 0 ID=cds-WP_000785626.1;Parent=gene-CCO56_RS10315;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=CCO56_RS10315;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 330957 331256 . + . ID=gene-CCO56_RS10320;Name=CCO56_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10320;old_locus_tag=CCO56_10320 NZ_NPMB01000004.1 Protein Homology CDS 330957 331256 . + 0 ID=cds-WP_000095496.1;Parent=gene-CCO56_RS10320;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=CCO56_RS10320;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 331504 331896 . + . ID=gene-CCO56_RS10325;Name=CCO56_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10325;old_locus_tag=CCO56_10325 NZ_NPMB01000004.1 Protein Homology CDS 331504 331896 . + 0 ID=cds-WP_001592732.1;Parent=gene-CCO56_RS10325;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=CCO56_RS10325;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 331964 332950 . + . ID=gene-CCO56_RS10330;Name=CCO56_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10330;old_locus_tag=CCO56_10330 NZ_NPMB01000004.1 Protein Homology CDS 331964 332950 . + 0 ID=cds-WP_061377849.1;Parent=gene-CCO56_RS10330;Dbxref=GenBank:WP_061377849.1;Name=WP_061377849.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=CCO56_RS10330;product=glutathione S-transferase family protein;protein_id=WP_061377849.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 333074 333439 . + . ID=gene-CCO56_RS10335;Name=CCO56_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10335;old_locus_tag=CCO56_10335 NZ_NPMB01000004.1 Protein Homology CDS 333074 333439 . + 0 ID=cds-WP_000384139.1;Parent=gene-CCO56_RS10335;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=CCO56_RS10335;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 333478 334374 . - . ID=gene-CCO56_RS10340;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=CCO56_RS10340;old_locus_tag=CCO56_10340 NZ_NPMB01000004.1 Protein Homology CDS 333478 334374 . - 0 ID=cds-WP_001041026.1;Parent=gene-CCO56_RS10340;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=CCO56_RS10340;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 334479 335180 . + . ID=gene-CCO56_RS10345;Name=CCO56_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10345;old_locus_tag=CCO56_10345 NZ_NPMB01000004.1 Protein Homology CDS 334479 335180 . + 0 ID=cds-WP_023233421.1;Parent=gene-CCO56_RS10345;Dbxref=GenBank:WP_023233421.1;Name=WP_023233421.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=CCO56_RS10345;product=pirin family protein;protein_id=WP_023233421.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 335204 335368 . + . ID=gene-CCO56_RS10350;Name=CCO56_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10350;old_locus_tag=CCO56_10350 NZ_NPMB01000004.1 Protein Homology CDS 335204 335368 . + 0 ID=cds-WP_000039326.1;Parent=gene-CCO56_RS10350;Dbxref=GenBank:WP_000039326.1;Name=WP_000039326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=CCO56_RS10350;product=hypothetical protein;protein_id=WP_000039326.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 335481 336791 . - . ID=gene-CCO56_RS10355;Name=CCO56_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10355;old_locus_tag=CCO56_10355 NZ_NPMB01000004.1 Protein Homology CDS 335481 336791 . - 0 ID=cds-WP_000463082.1;Parent=gene-CCO56_RS10355;Dbxref=GenBank:WP_000463082.1;Name=WP_000463082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=CCO56_RS10355;product=serine dehydratase subunit alpha family protein;protein_id=WP_000463082.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 336817 338148 . - . ID=gene-CCO56_RS10360;Name=CCO56_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10360;old_locus_tag=CCO56_10360 NZ_NPMB01000004.1 Protein Homology CDS 336817 338148 . - 0 ID=cds-WP_000443189.1;Parent=gene-CCO56_RS10360;Dbxref=GenBank:WP_000443189.1;Name=WP_000443189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=CCO56_RS10360;product=amino acid permease;protein_id=WP_000443189.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 338464 339828 . - . ID=gene-CCO56_RS10365;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=CCO56_RS10365;old_locus_tag=CCO56_10365 NZ_NPMB01000004.1 Protein Homology CDS 338464 339828 . - 0 ID=cds-WP_000622071.1;Parent=gene-CCO56_RS10365;Dbxref=GenBank:WP_000622071.1;Name=WP_000622071.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=CCO56_RS10365;product=L-serine ammonia-lyase;protein_id=WP_000622071.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 339898 342192 . - . ID=gene-CCO56_RS10370;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO56_RS10370;old_locus_tag=CCO56_10370 NZ_NPMB01000004.1 Protein Homology CDS 339898 342192 . - 0 ID=cds-WP_001528020.1;Parent=gene-CCO56_RS10370;Dbxref=GenBank:WP_001528020.1;Name=WP_001528020.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=CCO56_RS10370;product=formate C-acetyltransferase;protein_id=WP_001528020.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 342226 343434 . - . ID=gene-CCO56_RS10375;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=CCO56_RS10375;old_locus_tag=CCO56_10375 NZ_NPMB01000004.1 Protein Homology CDS 342226 343434 . - 0 ID=cds-WP_001001855.1;Parent=gene-CCO56_RS10375;Dbxref=GenBank:WP_001001855.1;Name=WP_001001855.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=CCO56_RS10375;product=propionate kinase;protein_id=WP_001001855.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 343501 344832 . - . ID=gene-CCO56_RS10380;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=CCO56_RS10380;old_locus_tag=CCO56_10380 NZ_NPMB01000004.1 Protein Homology CDS 343501 344832 . - 0 ID=cds-WP_000108129.1;Parent=gene-CCO56_RS10380;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=CCO56_RS10380;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 344853 345842 . - . ID=gene-CCO56_RS10385;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CCO56_RS10385;old_locus_tag=CCO56_10385 NZ_NPMB01000004.1 Protein Homology CDS 344853 345842 . - 0 ID=cds-WP_000548368.1;Parent=gene-CCO56_RS10385;Dbxref=GenBank:WP_000548368.1;Name=WP_000548368.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=CCO56_RS10385;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548368.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 345940 346878 . - . ID=gene-CCO56_RS10390;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=CCO56_RS10390;old_locus_tag=CCO56_10390 NZ_NPMB01000004.1 Protein Homology CDS 345940 346878 . - 0 ID=cds-WP_001094907.1;Parent=gene-CCO56_RS10390;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=CCO56_RS10390;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 348041 348415 . - . ID=gene-CCO56_RS10410;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CCO56_RS10410;old_locus_tag=CCO56_10410 NZ_NPMB01000004.1 cmsearch RNase_P_RNA 348041 348415 . - . ID=rna-CCO56_RS10410;Parent=gene-CCO56_RS10410;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS10410;product=RNase P RNA component class A NZ_NPMB01000004.1 cmsearch exon 348041 348415 . - . ID=exon-CCO56_RS10410-1;Parent=rna-CCO56_RS10410;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS10410;product=RNase P RNA component class A NZ_NPMB01000004.1 RefSeq gene 348448 349593 . - . ID=gene-CCO56_RS10415;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=CCO56_RS10415;old_locus_tag=CCO56_10415 NZ_NPMB01000004.1 Protein Homology CDS 348448 349593 . - 0 ID=cds-WP_000706458.1;Parent=gene-CCO56_RS10415;Dbxref=GenBank:WP_000706458.1;Name=WP_000706458.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=CCO56_RS10415;product=glycerate 2-kinase;protein_id=WP_000706458.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 349691 350581 . - . ID=gene-CCO56_RS10420;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=CCO56_RS10420;old_locus_tag=CCO56_10420 NZ_NPMB01000004.1 Protein Homology CDS 349691 350581 . - 0 ID=cds-WP_000178106.1;Parent=gene-CCO56_RS10420;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=CCO56_RS10420;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 350607 351377 . - . ID=gene-CCO56_RS10425;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=CCO56_RS10425;old_locus_tag=CCO56_10425 NZ_NPMB01000004.1 Protein Homology CDS 350607 351377 . - 0 ID=cds-WP_001057715.1;Parent=gene-CCO56_RS10425;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=CCO56_RS10425;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 351907 353478 . + . ID=gene-CCO56_RS10430;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=CCO56_RS10430;old_locus_tag=CCO56_10430 NZ_NPMB01000004.1 Protein Homology CDS 351907 353478 . + 0 ID=cds-WP_001273723.1;Parent=gene-CCO56_RS10430;Dbxref=GenBank:WP_001273723.1;Name=WP_001273723.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=CCO56_RS10430;product=galactarate dehydratase;protein_id=WP_001273723.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 353718 354665 . - . ID=gene-CCO56_RS10435;Name=CCO56_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10435;old_locus_tag=CCO56_10435 NZ_NPMB01000004.1 Protein Homology CDS 353718 354665 . - 0 ID=cds-WP_001027806.1;Parent=gene-CCO56_RS10435;Dbxref=GenBank:WP_001027806.1;Name=WP_001027806.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462164.1;locus_tag=CCO56_RS10435;product=sugar kinase;protein_id=WP_001027806.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 354676 355509 . - . ID=gene-CCO56_RS10440;Name=CCO56_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10440;old_locus_tag=CCO56_10440 NZ_NPMB01000004.1 Protein Homology CDS 354676 355509 . - 0 ID=cds-WP_001118368.1;Parent=gene-CCO56_RS10440;Dbxref=GenBank:WP_001118368.1;Name=WP_001118368.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462165.1;locus_tag=CCO56_RS10440;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001118368.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 355843 356697 . + . ID=gene-CCO56_RS10445;Name=CCO56_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10445;old_locus_tag=CCO56_10445 NZ_NPMB01000004.1 Protein Homology CDS 355843 356697 . + 0 ID=cds-WP_000469985.1;Parent=gene-CCO56_RS10445;Dbxref=GenBank:WP_000469985.1;Name=WP_000469985.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=CCO56_RS10445;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469985.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 356708 357622 . + . ID=gene-CCO56_RS10450;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO56_RS10450;old_locus_tag=CCO56_10450 NZ_NPMB01000004.1 Protein Homology CDS 356708 357622 . + 0 ID=cds-WP_000640685.1;Parent=gene-CCO56_RS10450;Dbxref=GenBank:WP_000640685.1;Name=WP_000640685.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462167.1;locus_tag=CCO56_RS10450;product=1-phosphofructokinase;protein_id=WP_000640685.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 357649 359076 . + . ID=gene-CCO56_RS10455;Name=CCO56_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10455;old_locus_tag=CCO56_10455 NZ_NPMB01000004.1 Protein Homology CDS 357649 359076 . + 0 ID=cds-WP_000719914.1;Parent=gene-CCO56_RS10455;Dbxref=GenBank:WP_000719914.1;Name=WP_000719914.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462168.1;locus_tag=CCO56_RS10455;product=PTS fructose transporter subunit IIC;protein_id=WP_000719914.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 359063 359869 . + . ID=gene-CCO56_RS10460;Name=CCO56_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10460;old_locus_tag=CCO56_10460 NZ_NPMB01000004.1 Protein Homology CDS 359063 359869 . + 0 ID=cds-WP_001175244.1;Parent=gene-CCO56_RS10460;Dbxref=GenBank:WP_001175244.1;Name=WP_001175244.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462169.1;locus_tag=CCO56_RS10460;product=HPr family phosphocarrier protein;protein_id=WP_001175244.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 360067 361338 . + . ID=gene-CCO56_RS10465;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=CCO56_RS10465;old_locus_tag=CCO56_10465 NZ_NPMB01000004.1 Protein Homology CDS 360067 361338 . + 0 ID=cds-WP_080176951.1;Parent=gene-CCO56_RS10465;Dbxref=GenBank:WP_080176951.1;Name=WP_080176951.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=CCO56_RS10465;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_080176951.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 361353 361817 . + . ID=gene-CCO56_RS10470;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CCO56_RS10470;old_locus_tag=CCO56_10470 NZ_NPMB01000004.1 Protein Homology CDS 361353 361817 . + 0 ID=cds-WP_000080444.1;Parent=gene-CCO56_RS10470;Dbxref=GenBank:WP_000080444.1;Name=WP_000080444.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=CCO56_RS10470;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080444.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 361848 362132 . + . ID=gene-CCO56_RS10475;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CCO56_RS10475;old_locus_tag=CCO56_10475 NZ_NPMB01000004.1 Protein Homology CDS 361848 362132 . + 0 ID=cds-WP_000824293.1;Parent=gene-CCO56_RS10475;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=CCO56_RS10475;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 362136 363509 . + . ID=gene-CCO56_RS10480;Name=CCO56_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10480;old_locus_tag=CCO56_10480 NZ_NPMB01000004.1 Protein Homology CDS 362136 363509 . + 0 ID=cds-WP_080176950.1;Parent=gene-CCO56_RS10480;Dbxref=GenBank:WP_080176950.1;Name=WP_080176950.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=CCO56_RS10480;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_080176950.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 363553 364596 . + . ID=gene-CCO56_RS10485;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CCO56_RS10485;old_locus_tag=CCO56_10485 NZ_NPMB01000004.1 Protein Homology CDS 363553 364596 . + 0 ID=cds-WP_000844174.1;Parent=gene-CCO56_RS10485;Dbxref=GenBank:WP_000844174.1;Name=WP_000844174.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=CCO56_RS10485;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844174.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 364707 365480 . + . ID=gene-CCO56_RS10490;Name=CCO56_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10490;old_locus_tag=CCO56_10490 NZ_NPMB01000004.1 Protein Homology CDS 364707 365480 . + 0 ID=cds-WP_001083899.1;Parent=gene-CCO56_RS10490;Dbxref=GenBank:WP_001083899.1;Name=WP_001083899.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=CCO56_RS10490;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083899.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 365638 366501 . - . ID=gene-CCO56_RS10495;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CCO56_RS10495;old_locus_tag=CCO56_10495 NZ_NPMB01000004.1 Protein Homology CDS 365638 366501 . - 0 ID=cds-WP_000812295.1;Parent=gene-CCO56_RS10495;Dbxref=GenBank:WP_000812295.1;Name=WP_000812295.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=CCO56_RS10495;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812295.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 366565 368607 . + . ID=gene-CCO56_RS10500;Name=CCO56_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10500;old_locus_tag=CCO56_10500 NZ_NPMB01000004.1 Protein Homology CDS 366565 368607 . + 0 ID=cds-WP_000249235.1;Parent=gene-CCO56_RS10500;Dbxref=GenBank:WP_000249235.1;Name=WP_000249235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=CCO56_RS10500;product=penicillin-binding protein activator;protein_id=WP_000249235.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 368565 368960 . + . ID=gene-CCO56_RS10505;Name=CCO56_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10505;old_locus_tag=CCO56_10505 NZ_NPMB01000004.1 Protein Homology CDS 368565 368960 . + 0 ID=cds-WP_000057285.1;Parent=gene-CCO56_RS10505;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=CCO56_RS10505;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 368982 369572 . + . ID=gene-CCO56_RS10510;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=CCO56_RS10510;old_locus_tag=CCO56_10510 NZ_NPMB01000004.1 Protein Homology CDS 368982 369572 . + 0 ID=cds-WP_000893481.1;Parent=gene-CCO56_RS10510;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=CCO56_RS10510;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 369582 370157 . + . ID=gene-CCO56_RS10515;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=CCO56_RS10515;old_locus_tag=CCO56_10515 NZ_NPMB01000004.1 Protein Homology CDS 369582 370157 . + 0 ID=cds-WP_000643280.1;Parent=gene-CCO56_RS10515;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=CCO56_RS10515;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 370224 370859 . - . ID=gene-CCO56_RS10520;Name=CCO56_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10520;old_locus_tag=CCO56_10520 NZ_NPMB01000004.1 Protein Homology CDS 370224 370859 . - 0 ID=cds-WP_001521094.1;Parent=gene-CCO56_RS10520;Dbxref=GenBank:WP_001521094.1;Name=WP_001521094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=CCO56_RS10520;product=NAD(P)H-binding protein;protein_id=WP_001521094.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 370990 371508 . + . ID=gene-CCO56_RS10525;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=CCO56_RS10525;old_locus_tag=CCO56_10525 NZ_NPMB01000004.1 Protein Homology CDS 370990 371508 . + 0 ID=cds-WP_000037599.1;Parent=gene-CCO56_RS10525;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=CCO56_RS10525;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 371488 371931 . - . ID=gene-CCO56_RS10530;Name=CCO56_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10530;old_locus_tag=CCO56_10530 NZ_NPMB01000004.1 Protein Homology CDS 371488 371931 . - 0 ID=cds-WP_000380404.1;Parent=gene-CCO56_RS10530;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=CCO56_RS10530;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 371969 372286 . + . ID=gene-CCO56_RS10535;Name=CCO56_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10535;old_locus_tag=CCO56_10535 NZ_NPMB01000004.1 Protein Homology CDS 371969 372286 . + 0 ID=cds-WP_080176948.1;Parent=gene-CCO56_RS10535;Dbxref=GenBank:WP_080176948.1;Name=WP_080176948.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=CCO56_RS10535;product=GIY-YIG nuclease family protein;protein_id=WP_080176948.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 372273 372776 . - . ID=gene-CCO56_RS10540;Name=CCO56_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10540;old_locus_tag=CCO56_10540 NZ_NPMB01000004.1 Protein Homology CDS 372273 372776 . - 0 ID=cds-WP_000908562.1;Parent=gene-CCO56_RS10540;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=CCO56_RS10540;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 372770 373294 . - . ID=gene-CCO56_RS10545;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=CCO56_RS10545;old_locus_tag=CCO56_10545 NZ_NPMB01000004.1 Protein Homology CDS 372770 373294 . - 0 ID=cds-WP_000884721.1;Parent=gene-CCO56_RS10545;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=CCO56_RS10545;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 373511 374506 . + . ID=gene-CCO56_RS10550;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=CCO56_RS10550;old_locus_tag=CCO56_10550 NZ_NPMB01000004.1 Protein Homology CDS 373511 374506 . + 0 ID=cds-WP_080176947.1;Parent=gene-CCO56_RS10550;Dbxref=GenBank:WP_080176947.1;Name=WP_080176947.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=CCO56_RS10550;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_080176947.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 374515 375393 . + . ID=gene-CCO56_RS10555;Name=CCO56_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10555;old_locus_tag=CCO56_10555 NZ_NPMB01000004.1 Protein Homology CDS 374515 375393 . + 0 ID=cds-WP_000877715.1;Parent=gene-CCO56_RS10555;Dbxref=GenBank:WP_000877715.1;Name=WP_000877715.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=CCO56_RS10555;product=U32 family peptidase;protein_id=WP_000877715.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 375571 376578 . + . ID=gene-CCO56_RS10560;Name=CCO56_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10560;old_locus_tag=CCO56_10560 NZ_NPMB01000004.1 Protein Homology CDS 375571 376578 . + 0 ID=cds-WP_000130439.1;Parent=gene-CCO56_RS10560;Dbxref=GenBank:WP_000130439.1;Name=WP_000130439.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=CCO56_RS10560;product=luciferase-like monooxygenase;protein_id=WP_000130439.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 376669 377913 . - . ID=gene-CCO56_RS10565;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=CCO56_RS10565;old_locus_tag=CCO56_10565 NZ_NPMB01000004.1 Protein Homology CDS 376669 377913 . - 0 ID=cds-WP_000224387.1;Parent=gene-CCO56_RS10565;Dbxref=GenBank:WP_000224387.1;Name=WP_000224387.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=CCO56_RS10565;product=tryptophan permease;protein_id=WP_000224387.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 378067 379956 . - . ID=gene-CCO56_RS10570;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=CCO56_RS10570;old_locus_tag=CCO56_10570 NZ_NPMB01000004.1 Protein Homology CDS 378067 379956 . - 0 ID=cds-WP_000807248.1;Parent=gene-CCO56_RS10570;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=CCO56_RS10570;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 379949 380029 . - . ID=gene-CCO56_RS23375;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=CCO56_RS23375 NZ_NPMB01000004.1 Protein Homology CDS 379949 380029 . - 0 ID=cds-WP_010723222.1;Parent=gene-CCO56_RS23375;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=CCO56_RS23375;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 380135 381019 . - . ID=gene-CCO56_RS10575;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=CCO56_RS10575;old_locus_tag=CCO56_10575 NZ_NPMB01000004.1 Protein Homology CDS 380135 381019 . - 0 ID=cds-WP_000802069.1;Parent=gene-CCO56_RS10575;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=CCO56_RS10575;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 381129 383264 . - . ID=gene-CCO56_RS10580;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CCO56_RS10580;old_locus_tag=CCO56_10580 NZ_NPMB01000004.1 Protein Homology CDS 381129 383264 . - 0 ID=cds-WP_001670767.1;Parent=gene-CCO56_RS10580;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=CCO56_RS10580;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 383506 383775 . - . ID=gene-CCO56_RS10585;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CCO56_RS10585;old_locus_tag=CCO56_10585 NZ_NPMB01000004.1 Protein Homology CDS 383506 383775 . - 0 ID=cds-WP_000059465.1;Parent=gene-CCO56_RS10585;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=CCO56_RS10585;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 383926 384870 . - . ID=gene-CCO56_RS10590;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CCO56_RS10590;old_locus_tag=CCO56_10590 NZ_NPMB01000004.1 Protein Homology CDS 383926 384870 . - 0 ID=cds-WP_080176946.1;Parent=gene-CCO56_RS10590;Dbxref=GenBank:WP_080176946.1;Name=WP_080176946.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=CCO56_RS10590;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_080176946.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 384870 385271 . - . ID=gene-CCO56_RS10595;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CCO56_RS10595;old_locus_tag=CCO56_10595 NZ_NPMB01000004.1 Protein Homology CDS 384870 385271 . - 0 ID=cds-WP_001040208.1;Parent=gene-CCO56_RS10595;Dbxref=GenBank:WP_001040208.1;Name=WP_001040208.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=CCO56_RS10595;product=30S ribosome-binding factor RbfA;protein_id=WP_001040208.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 385492 388170 . - . ID=gene-CCO56_RS10600;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CCO56_RS10600;old_locus_tag=CCO56_10600 NZ_NPMB01000004.1 Protein Homology CDS 385492 388170 . - 0 ID=cds-WP_000133064.1;Parent=gene-CCO56_RS10600;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=CCO56_RS10600;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 388195 389697 . - . ID=gene-CCO56_RS10605;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CCO56_RS10605;old_locus_tag=CCO56_10605 NZ_NPMB01000004.1 Protein Homology CDS 388195 389697 . - 0 ID=cds-WP_001031038.1;Parent=gene-CCO56_RS10605;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=CCO56_RS10605;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 389725 390177 . - . ID=gene-CCO56_RS10610;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CCO56_RS10610;old_locus_tag=CCO56_10610 NZ_NPMB01000004.1 Protein Homology CDS 389725 390177 . - 0 ID=cds-WP_000105461.1;Parent=gene-CCO56_RS10610;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=CCO56_RS10610;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 390385 390461 . - . ID=gene-CCO56_RS10615;Name=CCO56_RS10615;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS10615;old_locus_tag=CCO56_10615 NZ_NPMB01000004.1 tRNAscan-SE tRNA 390385 390461 . - . ID=rna-CCO56_RS10615;Parent=gene-CCO56_RS10615;anticodon=(pos:complement(390425..390427));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS10615;product=tRNA-Met NZ_NPMB01000004.1 tRNAscan-SE exon 390385 390461 . - . ID=exon-CCO56_RS10615-1;Parent=rna-CCO56_RS10615;anticodon=(pos:complement(390425..390427));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS10615;product=tRNA-Met NZ_NPMB01000004.1 RefSeq gene 390805 392148 . + . ID=gene-CCO56_RS10620;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=CCO56_RS10620;old_locus_tag=CCO56_10620 NZ_NPMB01000004.1 Protein Homology CDS 390805 392148 . + 0 ID=cds-WP_000207653.1;Parent=gene-CCO56_RS10620;Dbxref=GenBank:WP_000207653.1;Name=WP_000207653.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=CCO56_RS10620;product=argininosuccinate synthase;protein_id=WP_000207653.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 392345 392431 . - . ID=gene-CCO56_RS10625;Name=CCO56_RS10625;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS10625;old_locus_tag=CCO56_10625 NZ_NPMB01000004.1 tRNAscan-SE tRNA 392345 392431 . - . ID=rna-CCO56_RS10625;Parent=gene-CCO56_RS10625;anticodon=(pos:complement(392395..392397));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS10625;product=tRNA-Leu NZ_NPMB01000004.1 tRNAscan-SE exon 392345 392431 . - . ID=exon-CCO56_RS10625-1;Parent=rna-CCO56_RS10625;anticodon=(pos:complement(392395..392397));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS10625;product=tRNA-Leu NZ_NPMB01000004.1 RefSeq gene 392445 392777 . - . ID=gene-CCO56_RS10630;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CCO56_RS10630;old_locus_tag=CCO56_10630 NZ_NPMB01000004.1 Protein Homology CDS 392445 392777 . - 0 ID=cds-WP_000272680.1;Parent=gene-CCO56_RS10630;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=CCO56_RS10630;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 393000 394337 . - . ID=gene-CCO56_RS10635;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CCO56_RS10635;old_locus_tag=CCO56_10635 NZ_NPMB01000004.1 Protein Homology CDS 393000 394337 . - 0 ID=cds-WP_000071169.1;Parent=gene-CCO56_RS10635;Dbxref=GenBank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=CCO56_RS10635;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 394330 395178 . - . ID=gene-CCO56_RS10640;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CCO56_RS10640;old_locus_tag=CCO56_10640 NZ_NPMB01000004.1 Protein Homology CDS 394330 395178 . - 0 ID=cds-WP_000764711.1;Parent=gene-CCO56_RS10640;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=CCO56_RS10640;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 395281 397215 . - . ID=gene-CCO56_RS10645;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=CCO56_RS10645;old_locus_tag=CCO56_10645 NZ_NPMB01000004.1 Protein Homology CDS 395281 397215 . - 0 ID=cds-WP_001107480.1;Parent=gene-CCO56_RS10645;Dbxref=GenBank:WP_001107480.1;Name=WP_001107480.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=CCO56_RS10645;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107480.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 397319 397945 . - . ID=gene-CCO56_RS10655;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=CCO56_RS10655;old_locus_tag=CCO56_10655 NZ_NPMB01000004.1 Protein Homology CDS 397319 397945 . - 0 ID=cds-WP_000145974.1;Parent=gene-CCO56_RS10655;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=CCO56_RS10655;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 398072 398365 . + . ID=gene-CCO56_RS10660;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CCO56_RS10660;old_locus_tag=CCO56_10660 NZ_NPMB01000004.1 Protein Homology CDS 398072 398365 . + 0 ID=cds-WP_001592995.1;Parent=gene-CCO56_RS10660;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=CCO56_RS10660;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 398521 398997 . - . ID=gene-CCO56_RS10665;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CCO56_RS10665;old_locus_tag=CCO56_10665 NZ_NPMB01000004.1 Protein Homology CDS 398521 398997 . - 0 ID=cds-WP_001148008.1;Parent=gene-CCO56_RS10665;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=CCO56_RS10665;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 399245 400678 . + . ID=gene-CCO56_RS10670;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CCO56_RS10670;old_locus_tag=CCO56_10670 NZ_NPMB01000004.1 Protein Homology CDS 399245 400678 . + 0 ID=cds-WP_001212686.1;Parent=gene-CCO56_RS10670;Dbxref=GenBank:WP_001212686.1;Name=WP_001212686.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=CCO56_RS10670;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212686.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 400809 401981 . - . ID=gene-CCO56_RS10675;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=CCO56_RS10675;old_locus_tag=CCO56_10675 NZ_NPMB01000004.1 Protein Homology CDS 400809 401981 . - 0 ID=cds-WP_000673556.1;Parent=gene-CCO56_RS10675;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=CCO56_RS10675;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 401997 402962 . - . ID=gene-CCO56_RS10680;Name=CCO56_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10680;old_locus_tag=CCO56_10680 NZ_NPMB01000004.1 Protein Homology CDS 401997 402962 . - 0 ID=cds-WP_000813052.1;Parent=gene-CCO56_RS10680;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=CCO56_RS10680;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 403092 403349 . - . ID=gene-CCO56_RS10685;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CCO56_RS10685;old_locus_tag=CCO56_10685 NZ_NPMB01000004.1 Protein Homology CDS 403092 403349 . - 0 ID=cds-WP_000940593.1;Parent=gene-CCO56_RS10685;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=CCO56_RS10685;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 403369 403680 . - . ID=gene-CCO56_RS10690;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CCO56_RS10690;old_locus_tag=CCO56_10690 NZ_NPMB01000004.1 Protein Homology CDS 403369 403680 . - 0 ID=cds-WP_000271398.1;Parent=gene-CCO56_RS10690;Dbxref=GenBank:WP_000271398.1;Name=WP_000271398.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=CCO56_RS10690;product=50S ribosomal protein L21;protein_id=WP_000271398.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 403938 404909 . + . ID=gene-CCO56_RS10695;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=CCO56_RS10695;old_locus_tag=CCO56_10695 NZ_NPMB01000004.1 Protein Homology CDS 403938 404909 . + 0 ID=cds-WP_001047354.1;Parent=gene-CCO56_RS10695;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=CCO56_RS10695;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 405141 405428 . + . ID=gene-CCO56_RS10700;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=CCO56_RS10700;old_locus_tag=CCO56_10700 NZ_NPMB01000004.1 Protein Homology CDS 405141 405428 . + 0 ID=cds-WP_000444168.1;Parent=gene-CCO56_RS10700;Dbxref=GenBank:WP_000444168.1;Name=WP_000444168.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=CCO56_RS10700;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444168.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 405486 406745 . - . ID=gene-CCO56_RS10705;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CCO56_RS10705;old_locus_tag=CCO56_10705 NZ_NPMB01000004.1 Protein Homology CDS 405486 406745 . - 0 ID=cds-WP_000357288.1;Parent=gene-CCO56_RS10705;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=CCO56_RS10705;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 406799 407053 . - . ID=gene-CCO56_RS10710;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=CCO56_RS10710;old_locus_tag=CCO56_10710 NZ_NPMB01000004.1 Protein Homology CDS 406799 407053 . - 0 ID=cds-WP_001518349.1;Parent=gene-CCO56_RS10710;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=CCO56_RS10710;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 407241 407537 . - . ID=gene-CCO56_RS10715;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=CCO56_RS10715;old_locus_tag=CCO56_10715 NZ_NPMB01000004.1 Protein Homology CDS 407241 407537 . - 0 ID=cds-WP_000188844.1;Parent=gene-CCO56_RS10715;Dbxref=GenBank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=CCO56_RS10715;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 407537 408172 . - . ID=gene-CCO56_RS10720;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=CCO56_RS10720;old_locus_tag=CCO56_10720 NZ_NPMB01000004.1 Protein Homology CDS 407537 408172 . - 0 ID=cds-WP_000476475.1;Parent=gene-CCO56_RS10720;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=CCO56_RS10720;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 408191 408742 . - . ID=gene-CCO56_RS10725;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=CCO56_RS10725;old_locus_tag=CCO56_10725 NZ_NPMB01000004.1 Protein Homology CDS 408191 408742 . - 0 ID=cds-WP_001193591.1;Parent=gene-CCO56_RS10725;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=CCO56_RS10725;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 408747 409529 . - . ID=gene-CCO56_RS10730;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=CCO56_RS10730;old_locus_tag=CCO56_10730 NZ_NPMB01000004.1 Protein Homology CDS 408747 409529 . - 0 ID=cds-WP_000925786.1;Parent=gene-CCO56_RS10730;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=CCO56_RS10730;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 409537 410349 . - . ID=gene-CCO56_RS10735;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=CCO56_RS10735;old_locus_tag=CCO56_10735 NZ_NPMB01000004.1 Protein Homology CDS 409537 410349 . - 0 ID=cds-WP_000531566.1;Parent=gene-CCO56_RS10735;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=CCO56_RS10735;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 410562 411539 . + . ID=gene-CCO56_RS10740;Name=CCO56_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10740;old_locus_tag=CCO56_10740 NZ_NPMB01000004.1 Protein Homology CDS 410562 411539 . + 0 ID=cds-WP_000922742.1;Parent=gene-CCO56_RS10740;Dbxref=GenBank:WP_000922742.1;Name=WP_000922742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=CCO56_RS10740;product=calcium/sodium antiporter;protein_id=WP_000922742.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 411553 412539 . + . ID=gene-CCO56_RS10745;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=CCO56_RS10745;old_locus_tag=CCO56_10745 NZ_NPMB01000004.1 Protein Homology CDS 411553 412539 . + 0 ID=cds-WP_000018619.1;Parent=gene-CCO56_RS10745;Dbxref=GenBank:WP_000018619.1;Name=WP_000018619.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=CCO56_RS10745;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018619.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 412560 413126 . + . ID=gene-CCO56_RS10750;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=CCO56_RS10750;old_locus_tag=CCO56_10750 NZ_NPMB01000004.1 Protein Homology CDS 412560 413126 . + 0 ID=cds-WP_000030029.1;Parent=gene-CCO56_RS10750;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=CCO56_RS10750;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 413123 413698 . + . ID=gene-CCO56_RS10755;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CCO56_RS10755;old_locus_tag=CCO56_10755 NZ_NPMB01000004.1 Protein Homology CDS 413123 413698 . + 0 ID=cds-WP_000047845.1;Parent=gene-CCO56_RS10755;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=CCO56_RS10755;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 413667 414221 . + . ID=gene-CCO56_RS10760;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=CCO56_RS10760;old_locus_tag=CCO56_10760 NZ_NPMB01000004.1 Protein Homology CDS 413667 414221 . + 0 ID=cds-WP_000669770.1;Parent=gene-CCO56_RS10760;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=CCO56_RS10760;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 414228 414953 . + . ID=gene-CCO56_RS10765;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CCO56_RS10765;old_locus_tag=CCO56_10765 NZ_NPMB01000004.1 Protein Homology CDS 414228 414953 . + 0 ID=cds-WP_000224104.1;Parent=gene-CCO56_RS10765;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=CCO56_RS10765;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 415001 416434 . + . ID=gene-CCO56_RS10770;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CCO56_RS10770;old_locus_tag=CCO56_10770 NZ_NPMB01000004.1 Protein Homology CDS 415001 416434 . + 0 ID=cds-WP_000809020.1;Parent=gene-CCO56_RS10770;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=CCO56_RS10770;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 416457 416744 . + . ID=gene-CCO56_RS10775;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CCO56_RS10775;old_locus_tag=CCO56_10775 NZ_NPMB01000004.1 Protein Homology CDS 416457 416744 . + 0 ID=cds-WP_001176589.1;Parent=gene-CCO56_RS10775;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=CCO56_RS10775;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 416862 417353 . + . ID=gene-CCO56_RS10780;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=CCO56_RS10780;old_locus_tag=CCO56_10780 NZ_NPMB01000004.1 Protein Homology CDS 416862 417353 . + 0 ID=cds-WP_000609332.1;Parent=gene-CCO56_RS10780;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=CCO56_RS10780;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 417399 418253 . + . ID=gene-CCO56_RS10785;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CCO56_RS10785;old_locus_tag=CCO56_10785 NZ_NPMB01000004.1 Protein Homology CDS 417399 418253 . + 0 ID=cds-WP_000243749.1;Parent=gene-CCO56_RS10785;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=CCO56_RS10785;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 418250 418522 . + . ID=gene-CCO56_RS10790;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=CCO56_RS10790;old_locus_tag=CCO56_10790 NZ_NPMB01000004.1 Protein Homology CDS 418250 418522 . + 0 ID=cds-WP_000216797.1;Parent=gene-CCO56_RS10790;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=CCO56_RS10790;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 418769 419401 . + . ID=gene-CCO56_RS10800;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=CCO56_RS10800;old_locus_tag=CCO56_10800 NZ_NPMB01000004.1 Protein Homology CDS 418769 419401 . + 0 ID=cds-WP_080177138.1;Parent=gene-CCO56_RS10800;Dbxref=GenBank:WP_080177138.1;Name=WP_080177138.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=CCO56_RS10800;product=PhoP regulatory network protein YrbL;protein_id=WP_080177138.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 419464 420192 . - . ID=gene-CCO56_RS10805;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=CCO56_RS10805;old_locus_tag=CCO56_10805 NZ_NPMB01000004.1 Protein Homology CDS 419464 420192 . - 0 ID=cds-WP_023214442.1;Parent=gene-CCO56_RS10805;Dbxref=GenBank:WP_023214442.1;Name=WP_023214442.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=CCO56_RS10805;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_023214442.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 420189 420842 . - . ID=gene-CCO56_RS10810;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=CCO56_RS10810;old_locus_tag=CCO56_10810 NZ_NPMB01000004.1 Protein Homology CDS 420189 420842 . - 0 ID=cds-WP_000719811.1;Parent=gene-CCO56_RS10810;Dbxref=GenBank:WP_000719811.1;Name=WP_000719811.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=CCO56_RS10810;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719811.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 421069 423405 . - . ID=gene-CCO56_RS10815;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=CCO56_RS10815;old_locus_tag=CCO56_10815 NZ_NPMB01000004.1 Protein Homology CDS 421069 423405 . - 0 ID=cds-WP_094882045.1;Parent=gene-CCO56_RS10815;Dbxref=GenBank:WP_094882045.1;Name=WP_094882045.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=CCO56_RS10815;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_094882045.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 423499 424428 . - . ID=gene-CCO56_RS10820;Name=CCO56_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10820;old_locus_tag=CCO56_10820 NZ_NPMB01000004.1 Protein Homology CDS 423499 424428 . - 0 ID=cds-WP_001176878.1;Parent=gene-CCO56_RS10820;Dbxref=GenBank:WP_001176878.1;Name=WP_001176878.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=CCO56_RS10820;product=TIGR01212 family radical SAM protein;protein_id=WP_001176878.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 425100 429560 . + . ID=gene-CCO56_RS10830;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CCO56_RS10830;old_locus_tag=CCO56_10830 NZ_NPMB01000004.1 Protein Homology CDS 425100 429560 . + 0 ID=cds-WP_000965011.1;Parent=gene-CCO56_RS10830;Dbxref=GenBank:WP_000965011.1;Name=WP_000965011.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=CCO56_RS10830;product=glutamate synthase large subunit;protein_id=WP_000965011.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 429570 430988 . + . ID=gene-CCO56_RS10835;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=CCO56_RS10835;old_locus_tag=CCO56_10835 NZ_NPMB01000004.1 Protein Homology CDS 429570 430988 . + 0 ID=cds-WP_000081633.1;Parent=gene-CCO56_RS10835;Dbxref=GenBank:WP_000081633.1;Name=WP_000081633.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=CCO56_RS10835;product=glutamate synthase subunit GltD;protein_id=WP_000081633.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 431196 432299 . + . ID=gene-CCO56_RS10840;Name=CCO56_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10840;old_locus_tag=CCO56_10840 NZ_NPMB01000004.1 Protein Homology CDS 431196 432299 . + 0 ID=cds-WP_000184301.1;Parent=gene-CCO56_RS10840;Dbxref=GenBank:WP_000184301.1;Name=WP_000184301.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=CCO56_RS10840;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000184301.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 432415 433668 . + . ID=gene-CCO56_RS10845;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=CCO56_RS10845;old_locus_tag=CCO56_10845 NZ_NPMB01000004.1 Protein Homology CDS 432415 433668 . + 0 ID=cds-WP_001542969.1;Parent=gene-CCO56_RS10845;Dbxref=GenBank:WP_001542969.1;Name=WP_001542969.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=CCO56_RS10845;product=cytosine permease;protein_id=WP_001542969.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 433655 434935 . + . ID=gene-CCO56_RS10850;Name=CCO56_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10850;old_locus_tag=CCO56_10850 NZ_NPMB01000004.1 Protein Homology CDS 433655 434935 . + 0 ID=cds-WP_001180667.1;Parent=gene-CCO56_RS10850;Dbxref=GenBank:WP_001180667.1;Name=WP_001180667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=CCO56_RS10850;product=cytosine deaminase;protein_id=WP_001180667.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 435017 435484 . - . ID=gene-CCO56_RS10855;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=CCO56_RS10855;old_locus_tag=CCO56_10855 NZ_NPMB01000004.1 Protein Homology CDS 435017 435484 . - 0 ID=cds-WP_000979901.1;Parent=gene-CCO56_RS10855;Dbxref=GenBank:WP_000979901.1;Name=WP_000979901.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=CCO56_RS10855;product=N-acetylneuraminate anomerase;protein_id=WP_000979901.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 435481 436356 . - . ID=gene-CCO56_RS10860;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=CCO56_RS10860;old_locus_tag=CCO56_10860 NZ_NPMB01000004.1 Protein Homology CDS 435481 436356 . - 0 ID=cds-WP_000208968.1;Parent=gene-CCO56_RS10860;Dbxref=GenBank:WP_000208968.1;Name=WP_000208968.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=CCO56_RS10860;product=N-acetylmannosamine kinase;protein_id=WP_000208968.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 436353 437042 . - . ID=gene-CCO56_RS10865;Name=CCO56_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10865;old_locus_tag=CCO56_10865 NZ_NPMB01000004.1 Protein Homology CDS 436353 437042 . - 0 ID=cds-WP_000054449.1;Parent=gene-CCO56_RS10865;Dbxref=GenBank:WP_000054449.1;Name=WP_000054449.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=CCO56_RS10865;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054449.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 437089 438579 . - . ID=gene-CCO56_RS10870;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=CCO56_RS10870;old_locus_tag=CCO56_10870 NZ_NPMB01000004.1 Protein Homology CDS 437089 438579 . - 0 ID=cds-WP_000108071.1;Parent=gene-CCO56_RS10870;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=CCO56_RS10870;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 438695 439588 . - . ID=gene-CCO56_RS10875;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=CCO56_RS10875;old_locus_tag=CCO56_10875 NZ_NPMB01000004.1 Protein Homology CDS 438695 439588 . - 0 ID=cds-WP_001029667.1;Parent=gene-CCO56_RS10875;Dbxref=GenBank:WP_001029667.1;Name=WP_001029667.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=CCO56_RS10875;product=N-acetylneuraminate lyase;protein_id=WP_001029667.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 439723 440514 . - . ID=gene-CCO56_RS10880;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=CCO56_RS10880;old_locus_tag=CCO56_10880 NZ_NPMB01000004.1 Protein Homology CDS 439723 440514 . - 0 ID=cds-WP_000382923.1;Parent=gene-CCO56_RS10880;Dbxref=GenBank:WP_000382923.1;Name=WP_000382923.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=CCO56_RS10880;product=transcriptional regulator NanR;protein_id=WP_000382923.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 440623 441123 . - . ID=gene-CCO56_RS10885;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=CCO56_RS10885;old_locus_tag=CCO56_10885 NZ_NPMB01000004.1 Protein Homology CDS 440623 441123 . - 0 ID=cds-WP_000366112.1;Parent=gene-CCO56_RS10885;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=CCO56_RS10885;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 441129 441767 . - . ID=gene-CCO56_RS10890;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=CCO56_RS10890;old_locus_tag=CCO56_10890 NZ_NPMB01000004.1 Protein Homology CDS 441129 441767 . - 0 ID=cds-WP_000257298.1;Parent=gene-CCO56_RS10890;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=CCO56_RS10890;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 442081 442473 . - . ID=gene-CCO56_RS10900;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CCO56_RS10900;old_locus_tag=CCO56_10900 NZ_NPMB01000004.1 Protein Homology CDS 442081 442473 . - 0 ID=cds-WP_000829815.1;Parent=gene-CCO56_RS10900;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=CCO56_RS10900;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 442489 442917 . - . ID=gene-CCO56_RS10905;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CCO56_RS10905;old_locus_tag=CCO56_10905 NZ_NPMB01000004.1 Protein Homology CDS 442489 442917 . - 0 ID=cds-WP_000847559.1;Parent=gene-CCO56_RS10905;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=CCO56_RS10905;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 443219 444343 . - . ID=gene-CCO56_RS10910;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=CCO56_RS10910;old_locus_tag=CCO56_10910 NZ_NPMB01000004.1 Protein Homology CDS 443219 444343 . - 0 ID=cds-WP_001191211.1;Parent=gene-CCO56_RS10910;Dbxref=GenBank:WP_001191211.1;Name=WP_001191211.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=CCO56_RS10910;product=cell division protein ZapE;protein_id=WP_001191211.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 444536 444934 . + . ID=gene-CCO56_RS10915;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=CCO56_RS10915;old_locus_tag=CCO56_10915 NZ_NPMB01000004.1 Protein Homology CDS 444536 444934 . + 0 ID=cds-WP_001519074.1;Parent=gene-CCO56_RS10915;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=CCO56_RS10915;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 445091 446458 . + . ID=gene-CCO56_RS10920;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=CCO56_RS10920;old_locus_tag=CCO56_10920 NZ_NPMB01000004.1 Protein Homology CDS 445091 446458 . + 0 ID=cds-WP_000716690.1;Parent=gene-CCO56_RS10920;Dbxref=GenBank:WP_000716690.1;Name=WP_000716690.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=CCO56_RS10920;product=serine endoprotease DegQ;protein_id=WP_000716690.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 446551 447621 . + . ID=gene-CCO56_RS10925;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=CCO56_RS10925;old_locus_tag=CCO56_10925 NZ_NPMB01000004.1 Protein Homology CDS 446551 447621 . + 0 ID=cds-WP_000497705.1;Parent=gene-CCO56_RS10925;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=CCO56_RS10925;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 447655 448386 . - . ID=gene-CCO56_RS10930;Name=CCO56_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10930;old_locus_tag=CCO56_10930 NZ_NPMB01000004.1 Protein Homology CDS 447655 448386 . - 0 ID=cds-WP_000602024.1;Parent=gene-CCO56_RS10930;Dbxref=GenBank:WP_000602024.1;Name=WP_000602024.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=CCO56_RS10930;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_000602024.1;transl_table=11 NZ_NPMB01000004.1 RefSeq gene 448406 448683 . - . ID=gene-CCO56_RS10935;Name=CCO56_RS10935;end_range=448683,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10935;old_locus_tag=CCO56_10935;partial=true NZ_NPMB01000004.1 Protein Homology CDS 448406 448683 . - 2 ID=cds-WP_141034754.1;Parent=gene-CCO56_RS10935;Dbxref=GenBank:WP_141034754.1;Name=WP_141034754.1;Ontology_term=GO:0006814,GO:0016829;end_range=448683,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462261.1;locus_tag=CCO56_RS10935;partial=true;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_141034754.1;transl_table=11 ##sequence-region NZ_NPMB01000005.1 1 401850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000005.1 RefSeq region 1 401850 . + . ID=NZ_NPMB01000005.1:1..401850;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000005.1 RefSeq gene 1 234 . + . ID=gene-CCO56_RS10940;Name=CCO56_RS10940;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO56_RS10940;old_locus_tag=CCO56_10940;partial=true;start_range=.,1 NZ_NPMB01000005.1 cmsearch rRNA 1 234 . + . ID=rna-CCO56_RS10940;Parent=gene-CCO56_RS10940;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS10940;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000005.1 cmsearch exon 1 234 . + . ID=exon-CCO56_RS10940-1;Parent=rna-CCO56_RS10940;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS10940;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_NPMB01000005.1 RefSeq gene 435 550 . + . ID=gene-CCO56_RS10945;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO56_RS10945;old_locus_tag=CCO56_10945 NZ_NPMB01000005.1 cmsearch rRNA 435 550 . + . ID=rna-CCO56_RS10945;Parent=gene-CCO56_RS10945;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS10945;product=5S ribosomal RNA NZ_NPMB01000005.1 cmsearch exon 435 550 . + . ID=exon-CCO56_RS10945-1;Parent=rna-CCO56_RS10945;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS10945;product=5S ribosomal RNA NZ_NPMB01000005.1 RefSeq gene 975 1430 . + . ID=gene-CCO56_RS10955;Name=CCO56_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10955;old_locus_tag=CCO56_10955 NZ_NPMB01000005.1 Protein Homology CDS 975 1430 . + 0 ID=cds-WP_000985656.1;Parent=gene-CCO56_RS10955;Dbxref=GenBank:WP_000985656.1;Name=WP_000985656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=CCO56_RS10955;product=DUF4385 domain-containing protein;protein_id=WP_000985656.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 1534 2835 . + . ID=gene-CCO56_RS10960;Name=CCO56_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10960;old_locus_tag=CCO56_10960 NZ_NPMB01000005.1 Protein Homology CDS 1534 2835 . + 0 ID=cds-WP_000807818.1;Parent=gene-CCO56_RS10960;Dbxref=GenBank:WP_000807818.1;Name=WP_000807818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=CCO56_RS10960;product=MFS transporter;protein_id=WP_000807818.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 2832 3155 . - . ID=gene-CCO56_RS10965;Name=CCO56_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10965;old_locus_tag=CCO56_10965 NZ_NPMB01000005.1 Protein Homology CDS 2832 3155 . - 0 ID=cds-WP_001264473.1;Parent=gene-CCO56_RS10965;Dbxref=GenBank:WP_001264473.1;Name=WP_001264473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=CCO56_RS10965;product=YfiM family lipoprotein;protein_id=WP_001264473.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 3200 4555 . - . ID=gene-CCO56_RS10970;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=CCO56_RS10970;old_locus_tag=CCO56_10970 NZ_NPMB01000005.1 Protein Homology CDS 3200 4555 . - 0 ID=cds-WP_000949286.1;Parent=gene-CCO56_RS10970;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=CCO56_RS10970;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 4670 7330 . - . ID=gene-CCO56_RS10975;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=CCO56_RS10975;old_locus_tag=CCO56_10975 NZ_NPMB01000005.1 Protein Homology CDS 4670 7330 . - 0 ID=cds-WP_000082643.1;Parent=gene-CCO56_RS10975;Dbxref=GenBank:WP_000082643.1;Name=WP_000082643.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=CCO56_RS10975;product=protein lysine acetyltransferase;protein_id=WP_000082643.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 7384 8064 . - . ID=gene-CCO56_RS10980;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=CCO56_RS10980;old_locus_tag=CCO56_10980 NZ_NPMB01000005.1 Protein Homology CDS 7384 8064 . - 0 ID=cds-WP_000183642.1;Parent=gene-CCO56_RS10980;Dbxref=GenBank:WP_000183642.1;Name=WP_000183642.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=CCO56_RS10980;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000183642.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 8137 8556 . - . ID=gene-CCO56_RS10985;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=CCO56_RS10985;old_locus_tag=CCO56_10985 NZ_NPMB01000005.1 Protein Homology CDS 8137 8556 . - 0 ID=cds-WP_001098732.1;Parent=gene-CCO56_RS10985;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=CCO56_RS10985;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 8760 9797 . + . ID=gene-CCO56_RS10995;Name=CCO56_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS10995;old_locus_tag=CCO56_10995 NZ_NPMB01000005.1 Protein Homology CDS 8760 9797 . + 0 ID=cds-WP_000997368.1;Parent=gene-CCO56_RS10995;Dbxref=GenBank:WP_000997368.1;Name=WP_000997368.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=CCO56_RS10995;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 9913 10602 . - . ID=gene-CCO56_RS11000;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=CCO56_RS11000;old_locus_tag=CCO56_11000 NZ_NPMB01000005.1 Protein Homology CDS 9913 10602 . - 0 ID=cds-WP_000179978.1;Parent=gene-CCO56_RS11000;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=CCO56_RS11000;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 10921 11304 . + . ID=gene-CCO56_RS11005;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=CCO56_RS11005;old_locus_tag=CCO56_11005 NZ_NPMB01000005.1 Protein Homology CDS 10921 11304 . + 0 ID=cds-WP_000627811.1;Parent=gene-CCO56_RS11005;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=CCO56_RS11005;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 11366 11953 . - . ID=gene-CCO56_RS11010;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=CCO56_RS11010;old_locus_tag=CCO56_11010 NZ_NPMB01000005.1 Protein Homology CDS 11366 11953 . - 0 ID=cds-WP_080176985.1;Parent=gene-CCO56_RS11010;Dbxref=GenBank:WP_080176985.1;Name=WP_080176985.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=CCO56_RS11010;product=cysteine/O-acetylserine transporter;protein_id=WP_080176985.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 12056 12955 . + . ID=gene-CCO56_RS11015;Name=CCO56_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11015;old_locus_tag=CCO56_11015 NZ_NPMB01000005.1 Protein Homology CDS 12056 12955 . + 0 ID=cds-WP_058116556.1;Parent=gene-CCO56_RS11015;Dbxref=GenBank:WP_058116556.1;Name=WP_058116556.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=CCO56_RS11015;product=LysR family transcriptional regulator;protein_id=WP_058116556.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 12973 14307 . - . ID=gene-CCO56_RS11020;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=CCO56_RS11020;old_locus_tag=CCO56_11020 NZ_NPMB01000005.1 Protein Homology CDS 12973 14307 . - 0 ID=cds-WP_000219174.1;Parent=gene-CCO56_RS11020;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=CCO56_RS11020;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 14437 15174 . + . ID=gene-CCO56_RS11025;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=CCO56_RS11025;old_locus_tag=CCO56_11025 NZ_NPMB01000005.1 Protein Homology CDS 14437 15174 . + 0 ID=cds-WP_000083343.1;Parent=gene-CCO56_RS11025;Dbxref=GenBank:WP_000083343.1;Name=WP_000083343.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=CCO56_RS11025;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_000083343.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 15159 16781 . - . ID=gene-CCO56_RS11030;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CCO56_RS11030;old_locus_tag=CCO56_11030 NZ_NPMB01000005.1 Protein Homology CDS 15159 16781 . - 0 ID=cds-WP_094882046.1;Parent=gene-CCO56_RS11030;Dbxref=GenBank:WP_094882046.1;Name=WP_094882046.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=CCO56_RS11030;product=L-aspartate oxidase;protein_id=WP_094882046.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 17045 17209 . + . ID=gene-CCO56_RS23385;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=CCO56_RS23385 NZ_NPMB01000005.1 Protein Homology CDS 17045 17209 . + 0 ID=cds-WP_014344135.1;Parent=gene-CCO56_RS23385;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=CCO56_RS23385;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 17206 17781 . + . ID=gene-CCO56_RS11040;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CCO56_RS11040;old_locus_tag=CCO56_11040 NZ_NPMB01000005.1 Protein Homology CDS 17206 17781 . + 0 ID=cds-WP_000003307.1;Parent=gene-CCO56_RS11040;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=CCO56_RS11040;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 17813 18463 . + . ID=gene-CCO56_RS11045;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=CCO56_RS11045;old_locus_tag=CCO56_11045 NZ_NPMB01000005.1 Protein Homology CDS 17813 18463 . + 0 ID=cds-WP_001168374.1;Parent=gene-CCO56_RS11045;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=CCO56_RS11045;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 18463 19419 . + . ID=gene-CCO56_RS11050;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=CCO56_RS11050;old_locus_tag=CCO56_11050 NZ_NPMB01000005.1 Protein Homology CDS 18463 19419 . + 0 ID=cds-WP_000812021.1;Parent=gene-CCO56_RS11050;Dbxref=GenBank:WP_000812021.1;Name=WP_000812021.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=CCO56_RS11050;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812021.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 19416 19895 . + . ID=gene-CCO56_RS11055;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=CCO56_RS11055;old_locus_tag=CCO56_11055 NZ_NPMB01000005.1 Protein Homology CDS 19416 19895 . + 0 ID=cds-WP_001630397.1;Parent=gene-CCO56_RS11055;Dbxref=GenBank:WP_001630397.1;Name=WP_001630397.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=CCO56_RS11055;product=SoxR-reducing system protein RseC;protein_id=WP_001630397.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 20147 21946 . + . ID=gene-CCO56_RS11065;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CCO56_RS11065;old_locus_tag=CCO56_11065 NZ_NPMB01000005.1 Protein Homology CDS 20147 21946 . + 0 ID=cds-WP_000790154.1;Parent=gene-CCO56_RS11065;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=CCO56_RS11065;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 21963 22937 . + . ID=gene-CCO56_RS11070;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CCO56_RS11070;old_locus_tag=CCO56_11070 NZ_NPMB01000005.1 Protein Homology CDS 21963 22937 . + 0 ID=cds-WP_000002559.1;Parent=gene-CCO56_RS11070;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=CCO56_RS11070;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 23211 23891 . + . ID=gene-CCO56_RS11080;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CCO56_RS11080;old_locus_tag=CCO56_11080 NZ_NPMB01000005.1 Protein Homology CDS 23211 23891 . + 0 ID=cds-WP_001068341.1;Parent=gene-CCO56_RS11080;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=CCO56_RS11080;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 23888 24793 . + . ID=gene-CCO56_RS11085;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CCO56_RS11085;old_locus_tag=CCO56_11085 NZ_NPMB01000005.1 Protein Homology CDS 23888 24793 . + 0 ID=cds-WP_000102230.1;Parent=gene-CCO56_RS11085;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=CCO56_RS11085;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 24805 25533 . + . ID=gene-CCO56_RS11090;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CCO56_RS11090;old_locus_tag=CCO56_11090 NZ_NPMB01000005.1 Protein Homology CDS 24805 25533 . + 0 ID=cds-WP_000399380.1;Parent=gene-CCO56_RS11090;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=CCO56_RS11090;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 25545 26276 . + . ID=gene-CCO56_RS11095;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=CCO56_RS11095;old_locus_tag=CCO56_11095 NZ_NPMB01000005.1 Protein Homology CDS 25545 26276 . + 0 ID=cds-WP_000818972.1;Parent=gene-CCO56_RS11095;Dbxref=GenBank:WP_000818972.1;Name=WP_000818972.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=CCO56_RS11095;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818972.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 26276 26656 . + . ID=gene-CCO56_RS11100;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CCO56_RS11100;old_locus_tag=CCO56_11100 NZ_NPMB01000005.1 Protein Homology CDS 26276 26656 . + 0 ID=cds-WP_000986043.1;Parent=gene-CCO56_RS11100;Dbxref=GenBank:WP_000986043.1;Name=WP_000986043.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=CCO56_RS11100;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 26768 27028 . - . ID=gene-CCO56_RS11105;Name=CCO56_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11105;old_locus_tag=CCO56_11105 NZ_NPMB01000005.1 Protein Homology CDS 26768 27028 . - 0 ID=cds-WP_001196290.1;Parent=gene-CCO56_RS11105;Dbxref=GenBank:WP_001196290.1;Name=WP_001196290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=CCO56_RS11105;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196290.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 27066 27992 . - . ID=gene-CCO56_RS11110;Name=CCO56_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11110;old_locus_tag=CCO56_11110 NZ_NPMB01000005.1 Protein Homology CDS 27066 27992 . - 0 ID=cds-WP_080176984.1;Parent=gene-CCO56_RS11110;Dbxref=GenBank:WP_080176984.1;Name=WP_080176984.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=CCO56_RS11110;product=LysR family transcriptional regulator;protein_id=WP_080176984.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 28108 29304 . + . ID=gene-CCO56_RS11115;Name=CCO56_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11115;old_locus_tag=CCO56_11115 NZ_NPMB01000005.1 Protein Homology CDS 28108 29304 . + 0 ID=cds-WP_001276365.1;Parent=gene-CCO56_RS11115;Dbxref=GenBank:WP_001276365.1;Name=WP_001276365.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=CCO56_RS11115;product=L-lactate MFS transporter;protein_id=WP_001276365.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 29326 30243 . + . ID=gene-CCO56_RS11120;Name=CCO56_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11120;old_locus_tag=CCO56_11120 NZ_NPMB01000005.1 Protein Homology CDS 29326 30243 . + 0 ID=cds-WP_080176983.1;Parent=gene-CCO56_RS11120;Dbxref=GenBank:WP_080176983.1;Name=WP_080176983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=CCO56_RS11120;product=oxidoreductase;protein_id=WP_080176983.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 30282 31130 . - . ID=gene-CCO56_RS11125;Name=CCO56_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11125;old_locus_tag=CCO56_11125 NZ_NPMB01000005.1 Protein Homology CDS 30282 31130 . - 0 ID=cds-WP_000995694.1;Parent=gene-CCO56_RS11125;Dbxref=GenBank:WP_000995694.1;Name=WP_000995694.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=CCO56_RS11125;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995694.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 31246 32139 . + . ID=gene-CCO56_RS11130;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CCO56_RS11130;old_locus_tag=CCO56_11130 NZ_NPMB01000005.1 Protein Homology CDS 31246 32139 . + 0 ID=cds-WP_080176982.1;Parent=gene-CCO56_RS11130;Dbxref=GenBank:WP_080176982.1;Name=WP_080176982.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=CCO56_RS11130;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_080176982.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 32150 33511 . + . ID=gene-CCO56_RS11135;Name=CCO56_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11135;old_locus_tag=CCO56_11135 NZ_NPMB01000005.1 Protein Homology CDS 32150 33511 . + 0 ID=cds-WP_000361660.1;Parent=gene-CCO56_RS11135;Dbxref=GenBank:WP_000361660.1;Name=WP_000361660.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=CCO56_RS11135;product=PTS transporter subunit EIIC;protein_id=WP_000361660.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 33515 34150 . + . ID=gene-CCO56_RS11140;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=CCO56_RS11140;old_locus_tag=CCO56_11140 NZ_NPMB01000005.1 Protein Homology CDS 33515 34150 . + 0 ID=cds-WP_080176981.1;Parent=gene-CCO56_RS11140;Dbxref=GenBank:WP_080176981.1;Name=WP_080176981.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=CCO56_RS11140;product=phosphatidylglycerophosphatase C;protein_id=WP_080176981.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 34175 34726 . + . ID=gene-CCO56_RS11145;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CCO56_RS11145;old_locus_tag=CCO56_11145 NZ_NPMB01000005.1 Protein Homology CDS 34175 34726 . + 0 ID=cds-WP_001134563.1;Parent=gene-CCO56_RS11145;Dbxref=GenBank:WP_001134563.1;Name=WP_001134563.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=CCO56_RS11145;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134563.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 34777 36321 . - . ID=gene-CCO56_RS11150;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=CCO56_RS11150;old_locus_tag=CCO56_11150 NZ_NPMB01000005.1 Protein Homology CDS 34777 36321 . - 0 ID=cds-WP_023232862.1;Parent=gene-CCO56_RS11150;Dbxref=GenBank:WP_023232862.1;Name=WP_023232862.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=CCO56_RS11150;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_023232862.1;transl_table=11 NZ_NPMB01000005.1 RefSeq pseudogene 36322 36555 . - . ID=gene-CCO56_RS11155;Name=CCO56_RS11155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS11155;old_locus_tag=CCO56_11155;pseudo=true NZ_NPMB01000005.1 Protein Homology CDS 36322 36555 . - 0 ID=cds-CCO56_RS11155;Parent=gene-CCO56_RS11155;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=CCO56_RS11155;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 36577 40464 . + . ID=gene-CCO56_RS11160;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=CCO56_RS11160;old_locus_tag=CCO56_11160 NZ_NPMB01000005.1 Protein Homology CDS 36577 40464 . + 0 ID=cds-WP_000970053.1;Parent=gene-CCO56_RS11160;Dbxref=GenBank:WP_000970053.1;Name=WP_000970053.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=CCO56_RS11160;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970053.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 41113 42543 . + . ID=gene-CCO56_RS11165;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=CCO56_RS11165;old_locus_tag=CCO56_11165 NZ_NPMB01000005.1 Protein Homology CDS 41113 42543 . + 0 ID=cds-WP_023136414.1;Parent=gene-CCO56_RS11165;Dbxref=GenBank:WP_023136414.1;Name=WP_023136414.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=CCO56_RS11165;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_023136414.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 42545 43309 . + . ID=gene-CCO56_RS11170;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=CCO56_RS11170;old_locus_tag=CCO56_11170 NZ_NPMB01000005.1 Protein Homology CDS 42545 43309 . + 0 ID=cds-WP_080176980.1;Parent=gene-CCO56_RS11170;Dbxref=GenBank:WP_080176980.1;Name=WP_080176980.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=CCO56_RS11170;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_080176980.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 43309 44643 . + . ID=gene-CCO56_RS11175;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=CCO56_RS11175;old_locus_tag=CCO56_11175 NZ_NPMB01000005.1 Protein Homology CDS 43309 44643 . + 0 ID=cds-WP_024131152.1;Parent=gene-CCO56_RS11175;Dbxref=GenBank:WP_024131152.1;Name=WP_024131152.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=CCO56_RS11175;product=two-component system response regulator GlrR;protein_id=WP_024131152.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 44720 45058 . + . ID=gene-CCO56_RS11180;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=CCO56_RS11180;old_locus_tag=CCO56_11180 NZ_NPMB01000005.1 Protein Homology CDS 44720 45058 . + 0 ID=cds-WP_000717694.1;Parent=gene-CCO56_RS11180;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=CCO56_RS11180;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 45107 46567 . - . ID=gene-CCO56_RS11185;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=CCO56_RS11185;old_locus_tag=CCO56_11185 NZ_NPMB01000005.1 Protein Homology CDS 45107 46567 . - 0 ID=cds-WP_000856793.1;Parent=gene-CCO56_RS11185;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=CCO56_RS11185;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 46623 48767 . - . ID=gene-CCO56_RS11190;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=CCO56_RS11190;old_locus_tag=CCO56_11190 NZ_NPMB01000005.1 Protein Homology CDS 46623 48767 . - 0 ID=cds-WP_001100652.1;Parent=gene-CCO56_RS11190;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=CCO56_RS11190;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 48850 50181 . - . ID=gene-CCO56_RS11195;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=CCO56_RS11195;old_locus_tag=CCO56_11195 NZ_NPMB01000005.1 Protein Homology CDS 48850 50181 . - 0 ID=cds-WP_000100008.1;Parent=gene-CCO56_RS11195;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=CCO56_RS11195;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 50542 52086 . - . ID=gene-CCO56_RS11200;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=CCO56_RS11200;old_locus_tag=CCO56_11200 NZ_NPMB01000005.1 Protein Homology CDS 50542 52086 . - 0 ID=cds-WP_053258931.1;Parent=gene-CCO56_RS11200;Dbxref=GenBank:WP_053258931.1;Name=WP_053258931.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=CCO56_RS11200;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_053258931.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 52268 53458 . - . ID=gene-CCO56_RS11205;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=CCO56_RS11205;old_locus_tag=CCO56_11205 NZ_NPMB01000005.1 Protein Homology CDS 52268 53458 . - 0 ID=cds-WP_000883146.1;Parent=gene-CCO56_RS11205;Dbxref=GenBank:WP_000883146.1;Name=WP_000883146.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=CCO56_RS11205;product=NO-inducible flavohemoprotein;protein_id=WP_000883146.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 53783 55036 . + . ID=gene-CCO56_RS11210;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CCO56_RS11210;old_locus_tag=CCO56_11210 NZ_NPMB01000005.1 Protein Homology CDS 53783 55036 . + 0 ID=cds-WP_000919173.1;Parent=gene-CCO56_RS11210;Dbxref=GenBank:WP_000919173.1;Name=WP_000919173.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=CCO56_RS11210;product=serine hydroxymethyltransferase;protein_id=WP_000919173.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 55232 56371 . + . ID=gene-CCO56_RS11215;Name=CCO56_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11215;old_locus_tag=CCO56_11215 NZ_NPMB01000005.1 Protein Homology CDS 55232 56371 . + 0 ID=cds-WP_001173729.1;Parent=gene-CCO56_RS11215;Dbxref=GenBank:WP_001173729.1;Name=WP_001173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=CCO56_RS11215;product=3-phenylpropionate MFS transporter;protein_id=WP_001173729.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 56366 57643 . - . ID=gene-CCO56_RS11220;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=CCO56_RS11220;old_locus_tag=CCO56_11220 NZ_NPMB01000005.1 Protein Homology CDS 56366 57643 . - 0 ID=cds-WP_000982961.1;Parent=gene-CCO56_RS11220;Dbxref=GenBank:WP_000982961.1;Name=WP_000982961.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=CCO56_RS11220;product=stationary phase inducible protein CsiE;protein_id=WP_000982961.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 57769 58407 . + . ID=gene-CCO56_RS11225;Name=CCO56_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11225;old_locus_tag=CCO56_11225 NZ_NPMB01000005.1 Protein Homology CDS 57769 58407 . + 0 ID=cds-WP_000805728.1;Parent=gene-CCO56_RS11225;Dbxref=GenBank:WP_000805728.1;Name=WP_000805728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=CCO56_RS11225;product=DUF1007 family protein;protein_id=WP_000805728.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 58398 59384 . + . ID=gene-CCO56_RS11230;Name=CCO56_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11230;old_locus_tag=CCO56_11230 NZ_NPMB01000005.1 Protein Homology CDS 58398 59384 . + 0 ID=cds-WP_080176979.1;Parent=gene-CCO56_RS11230;Dbxref=GenBank:WP_080176979.1;Name=WP_080176979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=CCO56_RS11230;product=nickel/cobalt transporter;protein_id=WP_080176979.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 59385 60398 . - . ID=gene-CCO56_RS11235;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=CCO56_RS11235;old_locus_tag=CCO56_11235 NZ_NPMB01000005.1 Protein Homology CDS 59385 60398 . - 0 ID=cds-WP_000020685.1;Parent=gene-CCO56_RS11235;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=CCO56_RS11235;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 60410 61228 . - . ID=gene-CCO56_RS11240;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=CCO56_RS11240;old_locus_tag=CCO56_11240 NZ_NPMB01000005.1 Protein Homology CDS 60410 61228 . - 0 ID=cds-WP_000017587.1;Parent=gene-CCO56_RS11240;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=CCO56_RS11240;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 61232 62275 . - . ID=gene-CCO56_RS11245;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=CCO56_RS11245;old_locus_tag=CCO56_11245 NZ_NPMB01000005.1 Protein Homology CDS 61232 62275 . - 0 ID=cds-WP_000985214.1;Parent=gene-CCO56_RS11245;Dbxref=GenBank:WP_000985214.1;Name=WP_000985214.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=CCO56_RS11245;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985214.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 62457 63335 . - . ID=gene-CCO56_RS11250;Name=CCO56_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11250;old_locus_tag=CCO56_11250 NZ_NPMB01000005.1 Protein Homology CDS 62457 63335 . - 0 ID=cds-WP_000174935.1;Parent=gene-CCO56_RS11250;Dbxref=GenBank:WP_000174935.1;Name=WP_000174935.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=CCO56_RS11250;product=alpha/beta hydrolase;protein_id=WP_000174935.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 63480 64283 . - . ID=gene-CCO56_RS11255;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=CCO56_RS11255;old_locus_tag=CCO56_11255 NZ_NPMB01000005.1 Protein Homology CDS 63480 64283 . - 0 ID=cds-WP_000553473.1;Parent=gene-CCO56_RS11255;Dbxref=GenBank:WP_000553473.1;Name=WP_000553473.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=CCO56_RS11255;product=inositol-1-monophosphatase;protein_id=WP_000553473.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 64402 65133 . + . ID=gene-CCO56_RS11260;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=CCO56_RS11260;old_locus_tag=CCO56_11260 NZ_NPMB01000005.1 Protein Homology CDS 64402 65133 . + 0 ID=cds-WP_000940032.1;Parent=gene-CCO56_RS11260;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=CCO56_RS11260;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 65293 65787 . + . ID=gene-CCO56_RS11265;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=CCO56_RS11265;old_locus_tag=CCO56_11265 NZ_NPMB01000005.1 Protein Homology CDS 65293 65787 . + 0 ID=cds-WP_001241346.1;Parent=gene-CCO56_RS11265;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=CCO56_RS11265;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 65968 67182 . + . ID=gene-CCO56_RS11270;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=CCO56_RS11270;old_locus_tag=CCO56_11270 NZ_NPMB01000005.1 Protein Homology CDS 65968 67182 . + 0 ID=cds-WP_000775263.1;Parent=gene-CCO56_RS11270;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=CCO56_RS11270;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 67210 67596 . + . ID=gene-CCO56_RS11275;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=CCO56_RS11275;old_locus_tag=CCO56_11275 NZ_NPMB01000005.1 Protein Homology CDS 67210 67596 . + 0 ID=cds-WP_000331704.1;Parent=gene-CCO56_RS11275;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=CCO56_RS11275;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 67625 67948 . + . ID=gene-CCO56_RS11280;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=CCO56_RS11280;old_locus_tag=CCO56_11280 NZ_NPMB01000005.1 Protein Homology CDS 67625 67948 . + 0 ID=cds-WP_000028952.1;Parent=gene-CCO56_RS11280;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=CCO56_RS11280;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 68144 68659 . + . ID=gene-CCO56_RS11285;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=CCO56_RS11285;old_locus_tag=CCO56_11285 NZ_NPMB01000005.1 Protein Homology CDS 68144 68659 . + 0 ID=cds-WP_000384398.1;Parent=gene-CCO56_RS11285;Dbxref=GenBank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=CCO56_RS11285;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 68672 70522 . + . ID=gene-CCO56_RS11290;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=CCO56_RS11290;old_locus_tag=CCO56_11290 NZ_NPMB01000005.1 Protein Homology CDS 68672 70522 . + 0 ID=cds-WP_080176978.1;Parent=gene-CCO56_RS11290;Dbxref=GenBank:WP_080176978.1;Name=WP_080176978.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=CCO56_RS11290;product=Fe-S protein assembly chaperone HscA;protein_id=WP_080176978.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 70524 70859 . + . ID=gene-CCO56_RS11295;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=CCO56_RS11295;old_locus_tag=CCO56_11295 NZ_NPMB01000005.1 Protein Homology CDS 70524 70859 . + 0 ID=cds-WP_001124466.1;Parent=gene-CCO56_RS11295;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=CCO56_RS11295;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 70871 71071 . + . ID=gene-CCO56_RS11300;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=CCO56_RS11300;old_locus_tag=CCO56_11300 NZ_NPMB01000005.1 Protein Homology CDS 70871 71071 . + 0 ID=cds-WP_023136410.1;Parent=gene-CCO56_RS11300;Dbxref=GenBank:WP_023136410.1;Name=WP_023136410.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=CCO56_RS11300;product=Fe-S cluster assembly protein IscX;protein_id=WP_023136410.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 71125 72408 . + . ID=gene-CCO56_RS11305;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=CCO56_RS11305;old_locus_tag=CCO56_11305 NZ_NPMB01000005.1 Protein Homology CDS 71125 72408 . + 0 ID=cds-WP_000133546.1;Parent=gene-CCO56_RS11305;Dbxref=GenBank:WP_000133546.1;Name=WP_000133546.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=CCO56_RS11305;product=aminopeptidase PepB;protein_id=WP_000133546.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 72518 73294 . + . ID=gene-CCO56_RS11310;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO56_RS11310;old_locus_tag=CCO56_11310 NZ_NPMB01000005.1 Protein Homology CDS 72518 73294 . + 0 ID=cds-WP_001533245.1;Parent=gene-CCO56_RS11310;Dbxref=GenBank:WP_001533245.1;Name=WP_001533245.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=CCO56_RS11310;product=enhanced serine sensitivity protein SseB;protein_id=WP_001533245.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 73331 73447 . - . ID=gene-CCO56_RS24140;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=CCO56_RS24140 NZ_NPMB01000005.1 Protein Homology CDS 73331 73447 . - 0 ID=cds-WP_350400019.1;Parent=gene-CCO56_RS24140;Dbxref=GenBank:WP_350400019.1;Name=WP_350400019.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=CCO56_RS24140;product=small toxic inner membrane protein TimP;protein_id=WP_350400019.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 73863 74705 . - . ID=gene-CCO56_RS11320;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO56_RS11320;old_locus_tag=CCO56_11320 NZ_NPMB01000005.1 Protein Homology CDS 73863 74705 . - 0 ID=cds-WP_080176977.1;Parent=gene-CCO56_RS11320;Dbxref=GenBank:WP_080176977.1;Name=WP_080176977.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=CCO56_RS11320;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_080176977.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 74914 79848 . + . ID=gene-CCO56_RS11325;Name=CCO56_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11325;old_locus_tag=CCO56_11325 NZ_NPMB01000005.1 Protein Homology CDS 74914 79848 . + 0 ID=cds-WP_094882047.1;Parent=gene-CCO56_RS11325;Dbxref=GenBank:WP_094882047.1;Name=WP_094882047.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=CCO56_RS11325;product=alpha-2-macroglobulin family protein;protein_id=WP_094882047.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 79849 82164 . + . ID=gene-CCO56_RS11330;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=CCO56_RS11330;old_locus_tag=CCO56_11330 NZ_NPMB01000005.1 Protein Homology CDS 79849 82164 . + 0 ID=cds-WP_080176975.1;Parent=gene-CCO56_RS11330;Dbxref=GenBank:WP_080176975.1;Name=WP_080176975.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=CCO56_RS11330;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_080176975.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 82319 84697 . + . ID=gene-CCO56_RS11335;Name=CCO56_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11335;old_locus_tag=CCO56_11335 NZ_NPMB01000005.1 Protein Homology CDS 82319 84697 . + 0 ID=cds-WP_053258926.1;Parent=gene-CCO56_RS11335;Dbxref=GenBank:WP_053258926.1;Name=WP_053258926.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=CCO56_RS11335;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_053258926.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 84694 85323 . + . ID=gene-CCO56_RS11340;Name=CCO56_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11340;old_locus_tag=CCO56_11340 NZ_NPMB01000005.1 Protein Homology CDS 84694 85323 . + 0 ID=cds-WP_000077436.1;Parent=gene-CCO56_RS11340;Dbxref=GenBank:WP_000077436.1;Name=WP_000077436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=CCO56_RS11340;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000077436.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 85316 86125 . + . ID=gene-CCO56_RS11345;Name=CCO56_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11345;old_locus_tag=CCO56_11345 NZ_NPMB01000005.1 Protein Homology CDS 85316 86125 . + 0 ID=cds-WP_094882048.1;Parent=gene-CCO56_RS11345;Dbxref=GenBank:WP_094882048.1;Name=WP_094882048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=CCO56_RS11345;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_094882048.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 86125 86988 . + . ID=gene-CCO56_RS11350;Name=CCO56_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11350;old_locus_tag=CCO56_11350 NZ_NPMB01000005.1 Protein Homology CDS 86125 86988 . + 0 ID=cds-WP_000247781.1;Parent=gene-CCO56_RS11350;Dbxref=GenBank:WP_000247781.1;Name=WP_000247781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=CCO56_RS11350;product=4Fe-4S binding protein;protein_id=WP_000247781.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 87109 87540 . + . ID=gene-CCO56_RS11355;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CCO56_RS11355;old_locus_tag=CCO56_11355 NZ_NPMB01000005.1 Protein Homology CDS 87109 87540 . + 0 ID=cds-WP_000963846.1;Parent=gene-CCO56_RS11355;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=CCO56_RS11355;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 87747 88913 . + . ID=gene-CCO56_RS11360;Name=CCO56_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11360;old_locus_tag=CCO56_11360 NZ_NPMB01000005.1 Protein Homology CDS 87747 88913 . + 0 ID=cds-WP_000003206.1;Parent=gene-CCO56_RS11360;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=CCO56_RS11360;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 89205 90203 . + . ID=gene-CCO56_RS11370;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=CCO56_RS11370;old_locus_tag=CCO56_11370 NZ_NPMB01000005.1 Protein Homology CDS 89205 90203 . + 0 ID=cds-WP_052942688.1;Parent=gene-CCO56_RS11370;Dbxref=GenBank:WP_052942688.1;Name=WP_052942688.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=CCO56_RS11370;product=cytoskeleton protein RodZ;protein_id=WP_052942688.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 90230 91348 . + . ID=gene-CCO56_RS11375;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CCO56_RS11375;old_locus_tag=CCO56_11375 NZ_NPMB01000005.1 Protein Homology CDS 90230 91348 . + 0 ID=cds-WP_000551832.1;Parent=gene-CCO56_RS11375;Dbxref=GenBank:WP_000551832.1;Name=WP_000551832.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=CCO56_RS11375;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551832.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 91459 92733 . + . ID=gene-CCO56_RS11380;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CCO56_RS11380;old_locus_tag=CCO56_11380 NZ_NPMB01000005.1 Protein Homology CDS 91459 92733 . + 0 ID=cds-WP_001107141.1;Parent=gene-CCO56_RS11380;Dbxref=GenBank:WP_001107141.1;Name=WP_001107141.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=CCO56_RS11380;product=histidine--tRNA ligase;protein_id=WP_001107141.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 92747 93367 . + . ID=gene-CCO56_RS11385;Name=CCO56_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11385;old_locus_tag=CCO56_11385 NZ_NPMB01000005.1 Protein Homology CDS 92747 93367 . + 0 ID=cds-WP_053258925.1;Parent=gene-CCO56_RS11385;Dbxref=GenBank:WP_053258925.1;Name=WP_053258925.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=CCO56_RS11385;product=YfgM family protein;protein_id=WP_053258925.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 93378 94556 . + . ID=gene-CCO56_RS11390;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=CCO56_RS11390;old_locus_tag=CCO56_11390 NZ_NPMB01000005.1 Protein Homology CDS 93378 94556 . + 0 ID=cds-WP_001177071.1;Parent=gene-CCO56_RS11390;Dbxref=GenBank:WP_001177071.1;Name=WP_001177071.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=CCO56_RS11390;product=outer membrane protein assembly factor BamB;protein_id=WP_001177071.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 94673 96145 . + . ID=gene-CCO56_RS11395;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CCO56_RS11395;old_locus_tag=CCO56_11395 NZ_NPMB01000005.1 Protein Homology CDS 94673 96145 . + 0 ID=cds-WP_000249411.1;Parent=gene-CCO56_RS11395;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=CCO56_RS11395;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 96234 96455 . + . ID=gene-CCO56_RS11400;Name=CCO56_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11400;old_locus_tag=CCO56_11400 NZ_NPMB01000005.1 Protein Homology CDS 96234 96455 . + 0 ID=cds-WP_023262514.1;Parent=gene-CCO56_RS11400;Dbxref=GenBank:WP_023262514.1;Name=WP_023262514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=CCO56_RS11400;product=zinc ribbon domain-containing protein;protein_id=WP_023262514.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 96802 98994 . + . ID=gene-CCO56_RS11405;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=CCO56_RS11405;old_locus_tag=CCO56_11405 NZ_NPMB01000005.1 Protein Homology CDS 96802 98994 . + 0 ID=cds-WP_023262513.1;Parent=gene-CCO56_RS11405;Dbxref=GenBank:WP_023262513.1;Name=WP_023262513.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=CCO56_RS11405;product=intimin-like inverse autotransporter SinH;protein_id=WP_023262513.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 99052 100020 . + . ID=gene-CCO56_RS11410;Name=CCO56_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11410;old_locus_tag=CCO56_11410 NZ_NPMB01000005.1 Protein Homology CDS 99052 100020 . + 0 ID=cds-WP_023212373.1;Parent=gene-CCO56_RS11410;Dbxref=GenBank:WP_023212373.1;Name=WP_023212373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=CCO56_RS11410;product=SinI family autotransporter-associated protein;protein_id=WP_023212373.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 100140 105743 . + . ID=gene-CCO56_RS11415;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=CCO56_RS11415;old_locus_tag=CCO56_11415 NZ_NPMB01000005.1 Protein Homology CDS 100140 105743 . + 0 ID=cds-WP_080176974.1;Parent=gene-CCO56_RS11415;Dbxref=GenBank:WP_080176974.1;Name=WP_080176974.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081439.1;locus_tag=CCO56_RS11415;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_080176974.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 105869 113185 . + . ID=gene-CCO56_RS11420;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=CCO56_RS11420;old_locus_tag=CCO56_11420 NZ_NPMB01000005.1 Protein Homology CDS 105869 113185 . + 0 ID=cds-WP_080176973.1;Parent=gene-CCO56_RS11420;Dbxref=GenBank:WP_080176973.1;Name=WP_080176973.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=CCO56_RS11420;product=DUF823/DUF824 repeat adhesin RatB;protein_id=WP_080176973.1;transl_table=11 NZ_NPMB01000005.1 RefSeq pseudogene 113186 113286 . + . ID=gene-CCO56_RS24145;Name=CCO56_RS24145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24145;old_locus_tag=CCO56_11425;partial=true;pseudo=true;start_range=.,113186 NZ_NPMB01000005.1 Protein Homology CDS 113186 113286 . + 0 ID=cds-CCO56_RS24145;Parent=gene-CCO56_RS24145;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=CCO56_RS24145;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,113186;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 113818 119184 . + . ID=gene-CCO56_RS11430;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=CCO56_RS11430;old_locus_tag=CCO56_11430 NZ_NPMB01000005.1 Protein Homology CDS 113818 119184 . + 0 ID=cds-WP_080176972.1;Parent=gene-CCO56_RS11430;Dbxref=GenBank:WP_080176972.1;Name=WP_080176972.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=CCO56_RS11430;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_080176972.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 119348 120697 . - . ID=gene-CCO56_RS11435;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CCO56_RS11435;old_locus_tag=CCO56_11435 NZ_NPMB01000005.1 Protein Homology CDS 119348 120697 . - 0 ID=cds-WP_023229397.1;Parent=gene-CCO56_RS11435;Dbxref=GenBank:WP_023229397.1;Name=WP_023229397.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=CCO56_RS11435;product=exodeoxyribonuclease VII large subunit;protein_id=WP_023229397.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 120858 122324 . + . ID=gene-CCO56_RS11440;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CCO56_RS11440;old_locus_tag=CCO56_11440 NZ_NPMB01000005.1 Protein Homology CDS 120858 122324 . + 0 ID=cds-WP_000944174.1;Parent=gene-CCO56_RS11440;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=CCO56_RS11440;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 122393 123970 . + . ID=gene-CCO56_RS11445;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CCO56_RS11445;old_locus_tag=CCO56_11445 NZ_NPMB01000005.1 Protein Homology CDS 122393 123970 . + 0 ID=cds-WP_000138296.1;Parent=gene-CCO56_RS11445;Dbxref=GenBank:WP_000138296.1;Name=WP_000138296.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=CCO56_RS11445;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138296.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 124184 125437 . + . ID=gene-CCO56_RS11450;Name=CCO56_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11450;old_locus_tag=CCO56_11450 NZ_NPMB01000005.1 Protein Homology CDS 124184 125437 . + 0 ID=cds-WP_080176971.1;Parent=gene-CCO56_RS11450;Dbxref=GenBank:WP_080176971.1;Name=WP_080176971.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954550.1;locus_tag=CCO56_RS11450;product=tyrosine-type recombinase/integrase;protein_id=WP_080176971.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 125977 127206 . + . ID=gene-CCO56_RS11460;Name=CCO56_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11460;old_locus_tag=CCO56_11460 NZ_NPMB01000005.1 Protein Homology CDS 125977 127206 . + 0 ID=cds-WP_076934949.1;Parent=gene-CCO56_RS11460;Dbxref=GenBank:WP_076934949.1;Name=WP_076934949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091399.1;locus_tag=CCO56_RS11460;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_076934949.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 127218 128351 . + . ID=gene-CCO56_RS11465;Name=CCO56_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11465;old_locus_tag=CCO56_11465 NZ_NPMB01000005.1 Protein Homology CDS 127218 128351 . + 0 ID=cds-WP_080176969.1;Parent=gene-CCO56_RS11465;Dbxref=GenBank:WP_080176969.1;Name=WP_080176969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518927.1;locus_tag=CCO56_RS11465;product=beta family protein;protein_id=WP_080176969.1;transl_table=11 NZ_NPMB01000005.1 RefSeq pseudogene 128432 128677 . - . ID=gene-CCO56_RS11470;Name=CCO56_RS11470;end_range=128677,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS11470;old_locus_tag=CCO56_11470;partial=true;pseudo=true NZ_NPMB01000005.1 Protein Homology CDS 128432 128677 . - 0 ID=cds-CCO56_RS11470;Parent=gene-CCO56_RS11470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=128677,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001228212.1;locus_tag=CCO56_RS11470;partial=true;product=integrase domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 128720 129819 . - . ID=gene-CCO56_RS11475;Name=CCO56_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11475;old_locus_tag=CCO56_11475 NZ_NPMB01000005.1 Protein Homology CDS 129564 129819 . - 0 ID=cds-WP_094882049.1;Parent=gene-CCO56_RS11475;Dbxref=GenBank:WP_094882049.1;Name=WP_094882049.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=CCO56_RS11475;product=IS3 family transposase;protein_id=WP_094882049.1;transl_table=11 NZ_NPMB01000005.1 Protein Homology CDS 128720 129564 . - 2 ID=cds-WP_094882049.1;Parent=gene-CCO56_RS11475;Dbxref=GenBank:WP_094882049.1;Name=WP_094882049.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=CCO56_RS11475;product=IS3 family transposase;protein_id=WP_094882049.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 129977 130210 . + . ID=gene-CCO56_RS11480;Name=CCO56_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11480;old_locus_tag=CCO56_11480 NZ_NPMB01000005.1 Protein Homology CDS 129977 130210 . + 0 ID=cds-WP_000862030.1;Parent=gene-CCO56_RS11480;Dbxref=GenBank:WP_000862030.1;Name=WP_000862030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801504.1;locus_tag=CCO56_RS11480;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000862030.1;transl_table=11 NZ_NPMB01000005.1 RefSeq pseudogene 130406 130573 . + . ID=gene-CCO56_RS23800;Name=CCO56_RS23800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23800;partial=true;pseudo=true;start_range=.,130406 NZ_NPMB01000005.1 Protein Homology CDS 130406 130573 . + 0 ID=cds-CCO56_RS23800;Parent=gene-CCO56_RS23800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=CCO56_RS23800;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;start_range=.,130406;transl_table=11 NZ_NPMB01000005.1 RefSeq pseudogene 130900 131226 . + . ID=gene-CCO56_RS11490;Name=CCO56_RS11490;end_range=131226,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS11490;old_locus_tag=CCO56_11490;partial=true;pseudo=true;start_range=.,130900 NZ_NPMB01000005.1 Protein Homology CDS 130900 131226 . + 0 ID=cds-CCO56_RS11490;Parent=gene-CCO56_RS11490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=131226,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=CCO56_RS11490;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,130900;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 131307 131636 . - . ID=gene-CCO56_RS11495;Name=CCO56_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11495;old_locus_tag=CCO56_11495 NZ_NPMB01000005.1 Protein Homology CDS 131307 131636 . - 0 ID=cds-WP_078057572.1;Parent=gene-CCO56_RS11495;Dbxref=GenBank:WP_078057572.1;Name=WP_078057572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=CCO56_RS11495;product=DUF1493 family protein;protein_id=WP_078057572.1;transl_table=11 NZ_NPMB01000005.1 RefSeq pseudogene 131621 131843 . - . ID=gene-CCO56_RS24150;Name=CCO56_RS24150;end_range=131843,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24150;partial=true;pseudo=true NZ_NPMB01000005.1 Protein Homology CDS 131621 131843 . - 0 ID=cds-CCO56_RS24150;Parent=gene-CCO56_RS24150;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=131843,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_125368327.1;locus_tag=CCO56_RS24150;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000005.1 RefSeq pseudogene 132111 132254 . + . ID=gene-CCO56_RS23805;Name=CCO56_RS23805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23805;partial=true;pseudo=true;start_range=.,132111 NZ_NPMB01000005.1 Protein Homology CDS 132111 132254 . + 0 ID=cds-CCO56_RS23805;Parent=gene-CCO56_RS23805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=CCO56_RS23805;partial=true;product=hypothetical protein;pseudo=true;start_range=.,132111;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 132421 132960 . - . ID=gene-CCO56_RS11505;Name=CCO56_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11505;old_locus_tag=CCO56_11505 NZ_NPMB01000005.1 Protein Homology CDS 132421 132960 . - 0 ID=cds-WP_023229400.1;Parent=gene-CCO56_RS11505;Dbxref=GenBank:WP_023229400.1;Name=WP_023229400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755162.1;locus_tag=CCO56_RS11505;product=DUF5384 family protein;protein_id=WP_023229400.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 132976 133491 . - . ID=gene-CCO56_RS11510;Name=CCO56_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11510;old_locus_tag=CCO56_11510 NZ_NPMB01000005.1 Protein Homology CDS 132976 133491 . - 0 ID=cds-WP_001009636.1;Parent=gene-CCO56_RS11510;Dbxref=GenBank:WP_001009636.1;Name=WP_001009636.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311394.2;locus_tag=CCO56_RS11510;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001009636.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 133720 133911 . - . ID=gene-CCO56_RS11515;Name=CCO56_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11515;old_locus_tag=CCO56_11515 NZ_NPMB01000005.1 Protein Homology CDS 133720 133911 . - 0 ID=cds-WP_000075924.1;Parent=gene-CCO56_RS11515;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=CCO56_RS11515;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 134090 134227 . + . ID=gene-CCO56_RS11520;Name=CCO56_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11520;old_locus_tag=CCO56_11520 NZ_NPMB01000005.1 Protein Homology CDS 134090 134227 . + 0 ID=cds-WP_001640907.1;Parent=gene-CCO56_RS11520;Dbxref=GenBank:WP_001640907.1;Name=WP_001640907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=CCO56_RS11520;product=hypothetical protein;protein_id=WP_001640907.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 134324 136537 . + . ID=gene-CCO56_RS11525;Name=CCO56_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11525;old_locus_tag=CCO56_11525 NZ_NPMB01000005.1 Protein Homology CDS 134324 136537 . + 0 ID=cds-WP_000773653.1;Parent=gene-CCO56_RS11525;Dbxref=GenBank:WP_000773653.1;Name=WP_000773653.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=CCO56_RS11525;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773653.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 136573 138114 . - . ID=gene-CCO56_RS11530;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CCO56_RS11530;old_locus_tag=CCO56_11530 NZ_NPMB01000005.1 Protein Homology CDS 136573 138114 . - 0 ID=cds-WP_001123324.1;Parent=gene-CCO56_RS11530;Dbxref=GenBank:WP_001123324.1;Name=WP_001123324.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=CCO56_RS11530;product=exopolyphosphatase;protein_id=WP_001123324.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 138119 140185 . - . ID=gene-CCO56_RS11535;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=CCO56_RS11535;old_locus_tag=CCO56_11535 NZ_NPMB01000005.1 Protein Homology CDS 138119 140185 . - 0 ID=cds-WP_000529555.1;Parent=gene-CCO56_RS11535;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=CCO56_RS11535;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 140374 141012 . - . ID=gene-CCO56_RS11540;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CCO56_RS11540;old_locus_tag=CCO56_11540 NZ_NPMB01000005.1 Protein Homology CDS 140374 141012 . - 0 ID=cds-WP_001028588.1;Parent=gene-CCO56_RS11540;Dbxref=GenBank:WP_001028588.1;Name=WP_001028588.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=CCO56_RS11540;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028588.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 141012 142049 . - . ID=gene-CCO56_RS11545;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CCO56_RS11545;old_locus_tag=CCO56_11545 NZ_NPMB01000005.1 Protein Homology CDS 141012 142049 . - 0 ID=cds-WP_000130477.1;Parent=gene-CCO56_RS11545;Dbxref=GenBank:WP_000130477.1;Name=WP_000130477.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=CCO56_RS11545;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130477.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 142463 143089 . + . ID=gene-CCO56_RS11550;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CCO56_RS11550;old_locus_tag=CCO56_11550 NZ_NPMB01000005.1 Protein Homology CDS 142463 143089 . + 0 ID=cds-WP_000706208.1;Parent=gene-CCO56_RS11550;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=CCO56_RS11550;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 143177 144466 . + . ID=gene-CCO56_RS11555;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=CCO56_RS11555;old_locus_tag=CCO56_11555 NZ_NPMB01000005.1 Protein Homology CDS 143177 144466 . + 0 ID=cds-WP_000198344.1;Parent=gene-CCO56_RS11555;Dbxref=GenBank:WP_000198344.1;Name=WP_000198344.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=CCO56_RS11555;product=uracil permease;protein_id=WP_000198344.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 144561 145262 . + . ID=gene-CCO56_RS11560;Name=CCO56_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11560;old_locus_tag=CCO56_11560 NZ_NPMB01000005.1 Protein Homology CDS 144561 145262 . + 0 ID=cds-WP_061835882.1;Parent=gene-CCO56_RS11560;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=CCO56_RS11560;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 145289 145648 . - . ID=gene-CCO56_RS11565;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CCO56_RS11565;old_locus_tag=CCO56_11565 NZ_NPMB01000005.1 Protein Homology CDS 145289 145648 . - 0 ID=cds-WP_000132650.1;Parent=gene-CCO56_RS11565;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=CCO56_RS11565;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 145688 147151 . - . ID=gene-CCO56_RS11570;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=CCO56_RS11570;old_locus_tag=CCO56_11570 NZ_NPMB01000005.1 Protein Homology CDS 145688 147151 . - 0 ID=cds-WP_000489631.1;Parent=gene-CCO56_RS11570;Dbxref=GenBank:WP_000489631.1;Name=WP_000489631.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=CCO56_RS11570;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489631.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 147359 148426 . + . ID=gene-CCO56_RS11575;Name=CCO56_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11575;old_locus_tag=CCO56_11575 NZ_NPMB01000005.1 Protein Homology CDS 147359 148426 . + 0 ID=cds-WP_000892056.1;Parent=gene-CCO56_RS11575;Dbxref=GenBank:WP_000892056.1;Name=WP_000892056.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=CCO56_RS11575;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 148703 149890 . + . ID=gene-CCO56_RS11580;Name=CCO56_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11580;old_locus_tag=CCO56_11580 NZ_NPMB01000005.1 Protein Homology CDS 148703 149890 . + 0 ID=cds-WP_001533732.1;Parent=gene-CCO56_RS11580;Dbxref=GenBank:WP_001533732.1;Name=WP_001533732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=CCO56_RS11580;product=sugar diacid recognition domain-containing protein;protein_id=WP_001533732.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 149958 151226 . + . ID=gene-CCO56_RS11585;Name=CCO56_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11585;old_locus_tag=CCO56_11585 NZ_NPMB01000005.1 Protein Homology CDS 149958 151226 . + 0 ID=cds-WP_000200855.1;Parent=gene-CCO56_RS11585;Dbxref=GenBank:WP_000200855.1;Name=WP_000200855.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=CCO56_RS11585;product=GntP family permease;protein_id=WP_000200855.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 151232 152371 . + . ID=gene-CCO56_RS11590;Name=CCO56_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11590;old_locus_tag=CCO56_11590 NZ_NPMB01000005.1 Protein Homology CDS 151232 152371 . + 0 ID=cds-WP_000706384.1;Parent=gene-CCO56_RS11590;Dbxref=GenBank:WP_000706384.1;Name=WP_000706384.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=CCO56_RS11590;product=glycerate kinase;protein_id=WP_000706384.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 152418 152888 . - . ID=gene-CCO56_RS11595;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CCO56_RS11595;old_locus_tag=CCO56_11595 NZ_NPMB01000005.1 Protein Homology CDS 152418 152888 . - 0 ID=cds-WP_001068686.1;Parent=gene-CCO56_RS11595;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=CCO56_RS11595;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 152888 153460 . - . ID=gene-CCO56_RS11600;Name=CCO56_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11600;old_locus_tag=CCO56_11600 NZ_NPMB01000005.1 Protein Homology CDS 152888 153460 . - 0 ID=cds-WP_000189061.1;Parent=gene-CCO56_RS11600;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=CCO56_RS11600;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 153606 154484 . + . ID=gene-CCO56_RS11605;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CCO56_RS11605;old_locus_tag=CCO56_11605 NZ_NPMB01000005.1 Protein Homology CDS 153606 154484 . + 0 ID=cds-WP_000494020.1;Parent=gene-CCO56_RS11605;Dbxref=GenBank:WP_000494020.1;Name=WP_000494020.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=CCO56_RS11605;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494020.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 154501 155535 . + . ID=gene-CCO56_RS11610;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=CCO56_RS11610;old_locus_tag=CCO56_11610 NZ_NPMB01000005.1 Protein Homology CDS 154501 155535 . + 0 ID=cds-WP_000331870.1;Parent=gene-CCO56_RS11610;Dbxref=GenBank:WP_000331870.1;Name=WP_000331870.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=CCO56_RS11610;product=outer membrane protein assembly factor BamC;protein_id=WP_000331870.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 155710 156423 . + . ID=gene-CCO56_RS11615;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CCO56_RS11615;old_locus_tag=CCO56_11615 NZ_NPMB01000005.1 Protein Homology CDS 155710 156423 . + 0 ID=cds-WP_001171630.1;Parent=gene-CCO56_RS11615;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=CCO56_RS11615;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 156554 157417 . + . ID=gene-CCO56_RS11620;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=CCO56_RS11620;old_locus_tag=CCO56_11620 NZ_NPMB01000005.1 Protein Homology CDS 156554 157417 . + 0 ID=cds-WP_001267519.1;Parent=gene-CCO56_RS11620;Dbxref=GenBank:WP_001267519.1;Name=WP_001267519.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=CCO56_RS11620;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267519.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 157433 159451 . + . ID=gene-CCO56_RS11625;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=CCO56_RS11625;old_locus_tag=CCO56_11625 NZ_NPMB01000005.1 Protein Homology CDS 157433 159451 . + 0 ID=cds-WP_080176968.1;Parent=gene-CCO56_RS11625;Dbxref=GenBank:WP_080176968.1;Name=WP_080176968.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=CCO56_RS11625;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_080176968.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 159478 159678 . - . ID=gene-CCO56_RS11630;Name=CCO56_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11630;old_locus_tag=CCO56_11630 NZ_NPMB01000005.1 Protein Homology CDS 159478 159678 . - 0 ID=cds-WP_000383842.1;Parent=gene-CCO56_RS11630;Dbxref=GenBank:WP_000383842.1;Name=WP_000383842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=CCO56_RS11630;product=YpfN family protein;protein_id=WP_000383842.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 159706 160833 . - . ID=gene-CCO56_RS11635;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=CCO56_RS11635;old_locus_tag=CCO56_11635 NZ_NPMB01000005.1 Protein Homology CDS 159706 160833 . - 0 ID=cds-WP_001277825.1;Parent=gene-CCO56_RS11635;Dbxref=GenBank:WP_001277825.1;Name=WP_001277825.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=CCO56_RS11635;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277825.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 160837 161193 . - . ID=gene-CCO56_RS11640;Name=CCO56_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11640;old_locus_tag=CCO56_11640 NZ_NPMB01000005.1 Protein Homology CDS 160837 161193 . - 0 ID=cds-WP_000631927.1;Parent=gene-CCO56_RS11640;Dbxref=GenBank:WP_000631927.1;Name=WP_000631927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=CCO56_RS11640;product=ArsC family reductase;protein_id=WP_000631927.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 161606 161665 . + . ID=gene-CCO56_RS23390;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=CCO56_RS23390 NZ_NPMB01000005.1 Protein Homology CDS 161606 161665 . + 0 ID=cds-WP_001386977.1;Parent=gene-CCO56_RS23390;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=CCO56_RS23390;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 161767 164880 . - . ID=gene-CCO56_RS11645;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=CCO56_RS11645;old_locus_tag=CCO56_11645 NZ_NPMB01000005.1 Protein Homology CDS 161767 164880 . - 0 ID=cds-WP_001263076.1;Parent=gene-CCO56_RS11645;Dbxref=GenBank:WP_001263076.1;Name=WP_001263076.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=CCO56_RS11645;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001263076.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 165065 166765 . - . ID=gene-CCO56_RS11650;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=CCO56_RS11650;old_locus_tag=CCO56_11650 NZ_NPMB01000005.1 Protein Homology CDS 165065 166765 . - 0 ID=cds-WP_000216809.1;Parent=gene-CCO56_RS11650;Dbxref=GenBank:WP_000216809.1;Name=WP_000216809.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=CCO56_RS11650;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000216809.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 166951 168912 . + . ID=gene-CCO56_RS11655;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=CCO56_RS11655;old_locus_tag=CCO56_11655 NZ_NPMB01000005.1 Protein Homology CDS 166951 168912 . + 0 ID=cds-WP_023231208.1;Parent=gene-CCO56_RS11655;Dbxref=GenBank:WP_023231208.1;Name=WP_023231208.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=CCO56_RS11655;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_023231208.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 169361 170659 . - . ID=gene-CCO56_RS11660;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=CCO56_RS11660;old_locus_tag=CCO56_11660 NZ_NPMB01000005.1 Protein Homology CDS 169361 170659 . - 0 ID=cds-WP_080176967.1;Parent=gene-CCO56_RS11660;Dbxref=GenBank:WP_080176967.1;Name=WP_080176967.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=CCO56_RS11660;product=penicillin binding protein PBP4B;protein_id=WP_080176967.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 170863 171438 . + . ID=gene-CCO56_RS11665;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=CCO56_RS11665;old_locus_tag=CCO56_11665 NZ_NPMB01000005.1 Protein Homology CDS 170863 171438 . + 0 ID=cds-WP_094882050.1;Parent=gene-CCO56_RS11665;Dbxref=GenBank:WP_094882050.1;Name=WP_094882050.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=CCO56_RS11665;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_094882050.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 171563 172606 . + . ID=gene-CCO56_RS11670;Name=CCO56_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11670;old_locus_tag=CCO56_11670 NZ_NPMB01000005.1 Protein Homology CDS 171563 172606 . + 0 ID=cds-WP_001270669.1;Parent=gene-CCO56_RS11670;Dbxref=GenBank:WP_001270669.1;Name=WP_001270669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=CCO56_RS11670;product=DUF1176 domain-containing protein;protein_id=WP_001270669.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 172735 172965 . + . ID=gene-CCO56_RS11675;Name=CCO56_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11675;old_locus_tag=CCO56_11675 NZ_NPMB01000005.1 Protein Homology CDS 172735 172965 . + 0 ID=cds-WP_000700635.1;Parent=gene-CCO56_RS11675;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=CCO56_RS11675;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 173028 175028 . - . ID=gene-CCO56_RS11680;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO56_RS11680;old_locus_tag=CCO56_11680 NZ_NPMB01000005.1 Protein Homology CDS 173028 175028 . - 0 ID=cds-WP_000087331.1;Parent=gene-CCO56_RS11680;Dbxref=GenBank:WP_000087331.1;Name=WP_000087331.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=CCO56_RS11680;product=transketolase;protein_id=WP_000087331.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 175048 175998 . - . ID=gene-CCO56_RS11685;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO56_RS11685;old_locus_tag=CCO56_11685 NZ_NPMB01000005.1 Protein Homology CDS 175048 175998 . - 0 ID=cds-WP_001072443.1;Parent=gene-CCO56_RS11685;Dbxref=GenBank:WP_001072443.1;Name=WP_001072443.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=CCO56_RS11685;product=transaldolase;protein_id=WP_001072443.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 176270 178549 . + . ID=gene-CCO56_RS11695;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=CCO56_RS11695;old_locus_tag=CCO56_11695 NZ_NPMB01000005.1 Protein Homology CDS 176270 178549 . + 0 ID=cds-WP_000344299.1;Parent=gene-CCO56_RS11695;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=CCO56_RS11695;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 178966 179301 . + . ID=gene-CCO56_RS11700;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=CCO56_RS11700;old_locus_tag=CCO56_11700 NZ_NPMB01000005.1 Protein Homology CDS 178966 179301 . + 0 ID=cds-WP_001031445.1;Parent=gene-CCO56_RS11700;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=CCO56_RS11700;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 179314 179793 . + . ID=gene-CCO56_RS11705;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=CCO56_RS11705;old_locus_tag=CCO56_11705 NZ_NPMB01000005.1 Protein Homology CDS 179314 179793 . + 0 ID=cds-WP_000820751.1;Parent=gene-CCO56_RS11705;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=CCO56_RS11705;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 179771 180460 . + . ID=gene-CCO56_RS11710;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=CCO56_RS11710;old_locus_tag=CCO56_11710 NZ_NPMB01000005.1 Protein Homology CDS 179771 180460 . + 0 ID=cds-WP_000733868.1;Parent=gene-CCO56_RS11710;Dbxref=GenBank:WP_000733868.1;Name=WP_000733868.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=CCO56_RS11710;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733868.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 180457 181260 . + . ID=gene-CCO56_RS11715;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=CCO56_RS11715;old_locus_tag=CCO56_11715 NZ_NPMB01000005.1 Protein Homology CDS 180457 181260 . + 0 ID=cds-WP_000997661.1;Parent=gene-CCO56_RS11715;Dbxref=GenBank:WP_000997661.1;Name=WP_000997661.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=CCO56_RS11715;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997661.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 181257 182273 . + . ID=gene-CCO56_RS11720;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO56_RS11720;old_locus_tag=CCO56_11720 NZ_NPMB01000005.1 Protein Homology CDS 181257 182273 . + 0 ID=cds-WP_000582929.1;Parent=gene-CCO56_RS11720;Dbxref=GenBank:WP_000582929.1;Name=WP_000582929.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=CCO56_RS11720;product=phosphate acetyltransferase;protein_id=WP_000582929.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 182314 182604 . + . ID=gene-CCO56_RS11725;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=CCO56_RS11725;old_locus_tag=CCO56_11725 NZ_NPMB01000005.1 Protein Homology CDS 182314 182604 . + 0 ID=cds-WP_000387716.1;Parent=gene-CCO56_RS11725;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=CCO56_RS11725;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 182717 183004 . + . ID=gene-CCO56_RS11730;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=CCO56_RS11730;old_locus_tag=CCO56_11730 NZ_NPMB01000005.1 Protein Homology CDS 182717 183004 . + 0 ID=cds-WP_001522340.1;Parent=gene-CCO56_RS11730;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=CCO56_RS11730;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 183016 184419 . + . ID=gene-CCO56_RS11735;Name=CCO56_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11735;old_locus_tag=CCO56_11735 NZ_NPMB01000005.1 Protein Homology CDS 183016 184419 . + 0 ID=cds-WP_001075640.1;Parent=gene-CCO56_RS11735;Dbxref=GenBank:WP_001075640.1;Name=WP_001075640.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=CCO56_RS11735;product=aldehyde dehydrogenase family protein;protein_id=WP_001075640.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 184430 185269 . + . ID=gene-CCO56_RS11740;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=CCO56_RS11740;old_locus_tag=CCO56_11740 NZ_NPMB01000005.1 Protein Homology CDS 184430 185269 . + 0 ID=cds-WP_000929675.1;Parent=gene-CCO56_RS11740;Dbxref=GenBank:WP_000929675.1;Name=WP_000929675.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=CCO56_RS11740;product=ethanolamine utilization protein EutJ;protein_id=WP_000929675.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 185259 186446 . + . ID=gene-CCO56_RS11745;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=CCO56_RS11745;old_locus_tag=CCO56_11745 NZ_NPMB01000005.1 Protein Homology CDS 185259 186446 . + 0 ID=cds-WP_001147505.1;Parent=gene-CCO56_RS11745;Dbxref=GenBank:WP_001147505.1;Name=WP_001147505.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=CCO56_RS11745;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147505.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 186566 187792 . + . ID=gene-CCO56_RS11750;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=CCO56_RS11750;old_locus_tag=CCO56_11750 NZ_NPMB01000005.1 Protein Homology CDS 186566 187792 . + 0 ID=cds-WP_000512357.1;Parent=gene-CCO56_RS11750;Dbxref=GenBank:WP_000512357.1;Name=WP_000512357.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=CCO56_RS11750;product=ethanolamine utilization protein EutH;protein_id=WP_000512357.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 187789 189192 . + . ID=gene-CCO56_RS11755;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=CCO56_RS11755;old_locus_tag=CCO56_11755 NZ_NPMB01000005.1 Protein Homology CDS 187789 189192 . + 0 ID=cds-WP_023223129.1;Parent=gene-CCO56_RS11755;Dbxref=GenBank:WP_023223129.1;Name=WP_023223129.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=CCO56_RS11755;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_023223129.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 189204 190565 . + . ID=gene-CCO56_RS11760;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=CCO56_RS11760;old_locus_tag=CCO56_11760 NZ_NPMB01000005.1 Protein Homology CDS 189204 190565 . + 0 ID=cds-WP_000769990.1;Parent=gene-CCO56_RS11760;Dbxref=GenBank:WP_000769990.1;Name=WP_000769990.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=CCO56_RS11760;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769990.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 190584 191480 . + . ID=gene-CCO56_RS11765;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=CCO56_RS11765;old_locus_tag=CCO56_11765 NZ_NPMB01000005.1 Protein Homology CDS 190584 191480 . + 0 ID=cds-WP_000372354.1;Parent=gene-CCO56_RS11765;Dbxref=GenBank:WP_000372354.1;Name=WP_000372354.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=CCO56_RS11765;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372354.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 191490 192149 . + . ID=gene-CCO56_RS11770;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=CCO56_RS11770;old_locus_tag=CCO56_11770 NZ_NPMB01000005.1 Protein Homology CDS 191490 192149 . + 0 ID=cds-WP_001111056.1;Parent=gene-CCO56_RS11770;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=CCO56_RS11770;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 192162 192656 . + . ID=gene-CCO56_RS11775;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=CCO56_RS11775;old_locus_tag=CCO56_11775 NZ_NPMB01000005.1 Protein Homology CDS 192162 192656 . + 0 ID=cds-WP_000606266.1;Parent=gene-CCO56_RS11775;Dbxref=GenBank:WP_000606266.1;Name=WP_000606266.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=CCO56_RS11775;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606266.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 192704 193756 . + . ID=gene-CCO56_RS11780;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=CCO56_RS11780;old_locus_tag=CCO56_11780 NZ_NPMB01000005.1 Protein Homology CDS 192704 193756 . + 0 ID=cds-WP_000753665.1;Parent=gene-CCO56_RS11780;Dbxref=GenBank:WP_000753665.1;Name=WP_000753665.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=CCO56_RS11780;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753665.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 193856 194755 . - . ID=gene-CCO56_RS11785;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=CCO56_RS11785;old_locus_tag=CCO56_11785 NZ_NPMB01000005.1 Protein Homology CDS 193856 194755 . - 0 ID=cds-WP_000801343.1;Parent=gene-CCO56_RS11785;Dbxref=GenBank:WP_000801343.1;Name=WP_000801343.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=CCO56_RS11785;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801343.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 194758 195627 . - . ID=gene-CCO56_RS11790;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=CCO56_RS11790;old_locus_tag=CCO56_11790 NZ_NPMB01000005.1 Protein Homology CDS 194758 195627 . - 0 ID=cds-WP_000102880.1;Parent=gene-CCO56_RS11790;Dbxref=GenBank:WP_000102880.1;Name=WP_000102880.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=CCO56_RS11790;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 195840 196265 . + . ID=gene-CCO56_RS11795;Name=CCO56_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11795;old_locus_tag=CCO56_11795 NZ_NPMB01000005.1 Protein Homology CDS 195840 196265 . + 0 ID=cds-WP_000406008.1;Parent=gene-CCO56_RS11795;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=CCO56_RS11795;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 196252 196701 . + . ID=gene-CCO56_RS11800;Name=CCO56_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11800;old_locus_tag=CCO56_11800 NZ_NPMB01000005.1 Protein Homology CDS 196252 196701 . + 0 ID=cds-WP_000842940.1;Parent=gene-CCO56_RS11800;Dbxref=GenBank:WP_000842940.1;Name=WP_000842940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=CCO56_RS11800;product=DUF2919 domain-containing protein;protein_id=WP_000842940.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 196763 197338 . + . ID=gene-CCO56_RS11805;Name=CCO56_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11805;old_locus_tag=CCO56_11805 NZ_NPMB01000005.1 Protein Homology CDS 196763 197338 . + 0 ID=cds-WP_000838967.1;Parent=gene-CCO56_RS11805;Dbxref=GenBank:WP_000838967.1;Name=WP_000838967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=CCO56_RS11805;product=RpoE-regulated lipoprotein;protein_id=WP_000838967.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 197433 198332 . + . ID=gene-CCO56_RS11810;Name=CCO56_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11810;old_locus_tag=CCO56_11810 NZ_NPMB01000005.1 Protein Homology CDS 197433 198332 . + 0 ID=cds-WP_000084582.1;Parent=gene-CCO56_RS11810;Dbxref=GenBank:WP_000084582.1;Name=WP_000084582.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=CCO56_RS11810;product=Dyp-type peroxidase;protein_id=WP_000084582.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 198570 199361 . + . ID=gene-CCO56_RS11815;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=CCO56_RS11815;old_locus_tag=CCO56_11815 NZ_NPMB01000005.1 Protein Homology CDS 198570 199361 . + 0 ID=cds-WP_000517460.1;Parent=gene-CCO56_RS11815;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=CCO56_RS11815;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 199519 200535 . + . ID=gene-CCO56_RS11820;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=CCO56_RS11820;old_locus_tag=CCO56_11820 NZ_NPMB01000005.1 Protein Homology CDS 199519 200535 . + 0 ID=cds-WP_000290270.1;Parent=gene-CCO56_RS11820;Dbxref=GenBank:WP_000290270.1;Name=WP_000290270.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=CCO56_RS11820;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290270.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 200535 201368 . + . ID=gene-CCO56_RS11825;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=CCO56_RS11825;old_locus_tag=CCO56_11825 NZ_NPMB01000005.1 Protein Homology CDS 200535 201368 . + 0 ID=cds-WP_000881746.1;Parent=gene-CCO56_RS11825;Dbxref=GenBank:WP_000881746.1;Name=WP_000881746.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=CCO56_RS11825;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881746.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 201368 202243 . + . ID=gene-CCO56_RS11830;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=CCO56_RS11830;old_locus_tag=CCO56_11830 NZ_NPMB01000005.1 Protein Homology CDS 201368 202243 . + 0 ID=cds-WP_000852705.1;Parent=gene-CCO56_RS11830;Dbxref=GenBank:WP_000852705.1;Name=WP_000852705.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=CCO56_RS11830;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852705.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 202233 203330 . + . ID=gene-CCO56_RS11835;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=CCO56_RS11835;old_locus_tag=CCO56_11835 NZ_NPMB01000005.1 Protein Homology CDS 202233 203330 . + 0 ID=cds-WP_000021076.1;Parent=gene-CCO56_RS11835;Dbxref=GenBank:WP_000021076.1;Name=WP_000021076.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=CCO56_RS11835;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021076.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 203451 204362 . + . ID=gene-CCO56_RS11840;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=CCO56_RS11840;old_locus_tag=CCO56_11840 NZ_NPMB01000005.1 Protein Homology CDS 203451 204362 . + 0 ID=cds-WP_001093875.1;Parent=gene-CCO56_RS11840;Dbxref=GenBank:WP_001093875.1;Name=WP_001093875.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=CCO56_RS11840;product=cysteine synthase CysM;protein_id=WP_001093875.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 204395 204772 . - . ID=gene-CCO56_RS11845;Name=CCO56_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11845;old_locus_tag=CCO56_11845 NZ_NPMB01000005.1 Protein Homology CDS 204395 204772 . - 0 ID=cds-WP_000710726.1;Parent=gene-CCO56_RS11845;Dbxref=GenBank:WP_000710726.1;Name=WP_000710726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710726.1;locus_tag=CCO56_RS11845;product=YfeK family protein;protein_id=WP_000710726.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 204831 205550 . - . ID=gene-CCO56_RS11850;Name=CCO56_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11850;old_locus_tag=CCO56_11850 NZ_NPMB01000005.1 Protein Homology CDS 204831 205550 . - 0 ID=cds-WP_053259047.1;Parent=gene-CCO56_RS11850;Dbxref=GenBank:WP_053259047.1;Name=WP_053259047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=CCO56_RS11850;product=type 1 glutamine amidotransferase;protein_id=WP_053259047.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 205565 206857 . - . ID=gene-CCO56_RS11855;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=CCO56_RS11855;old_locus_tag=CCO56_11855 NZ_NPMB01000005.1 Protein Homology CDS 205565 206857 . - 0 ID=cds-WP_001606679.1;Parent=gene-CCO56_RS11855;Dbxref=GenBank:WP_001606679.1;Name=WP_001606679.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=CCO56_RS11855;product=transcriptional regulator PtsJ;protein_id=WP_001606679.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 206940 207806 . + . ID=gene-CCO56_RS11860;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=CCO56_RS11860;old_locus_tag=CCO56_11860 NZ_NPMB01000005.1 Protein Homology CDS 206940 207806 . + 0 ID=cds-WP_000529601.1;Parent=gene-CCO56_RS11860;Dbxref=GenBank:WP_000529601.1;Name=WP_000529601.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=CCO56_RS11860;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529601.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 207803 208042 . + . ID=gene-CCO56_RS11865;Name=CCO56_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11865;old_locus_tag=CCO56_11865 NZ_NPMB01000005.1 Protein Homology CDS 207803 208042 . + 0 ID=cds-WP_000844541.1;Parent=gene-CCO56_RS11865;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=CCO56_RS11865;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 208192 208701 . - . ID=gene-CCO56_RS11870;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=CCO56_RS11870;old_locus_tag=CCO56_11870 NZ_NPMB01000005.1 Protein Homology CDS 208192 208701 . - 0 ID=cds-WP_000522253.1;Parent=gene-CCO56_RS11870;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=CCO56_RS11870;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 208742 210469 . - . ID=gene-CCO56_RS11875;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=CCO56_RS11875;old_locus_tag=CCO56_11875 NZ_NPMB01000005.1 Protein Homology CDS 208742 210469 . - 0 ID=cds-WP_000623114.1;Parent=gene-CCO56_RS11875;Dbxref=GenBank:WP_000623114.1;Name=WP_000623114.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=CCO56_RS11875;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623114.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 210518 210775 . - . ID=gene-CCO56_RS11880;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=CCO56_RS11880;old_locus_tag=CCO56_11880 NZ_NPMB01000005.1 Protein Homology CDS 210518 210775 . - 0 ID=cds-WP_000487600.1;Parent=gene-CCO56_RS11880;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=CCO56_RS11880;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 211159 212130 . - . ID=gene-CCO56_RS11885;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CCO56_RS11885;old_locus_tag=CCO56_11885 NZ_NPMB01000005.1 Protein Homology CDS 211159 212130 . - 0 ID=cds-WP_000036904.1;Parent=gene-CCO56_RS11885;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=CCO56_RS11885;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 212294 213055 . - . ID=gene-CCO56_RS11890;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=CCO56_RS11890;old_locus_tag=CCO56_11890 NZ_NPMB01000005.1 Protein Homology CDS 212294 213055 . - 0 ID=cds-WP_000255004.1;Parent=gene-CCO56_RS11890;Dbxref=GenBank:WP_000255004.1;Name=WP_000255004.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=CCO56_RS11890;product=sulfate transporter CysZ;protein_id=WP_000255004.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 213287 214273 . + . ID=gene-CCO56_RS11895;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=CCO56_RS11895;old_locus_tag=CCO56_11895 NZ_NPMB01000005.1 Protein Homology CDS 213287 214273 . + 0 ID=cds-WP_000983115.1;Parent=gene-CCO56_RS11895;Dbxref=GenBank:WP_000983115.1;Name=WP_000983115.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=CCO56_RS11895;product=cell division protein ZipA;protein_id=WP_000983115.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 214345 216360 . + . ID=gene-CCO56_RS11900;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CCO56_RS11900;old_locus_tag=CCO56_11900 NZ_NPMB01000005.1 Protein Homology CDS 214345 216360 . + 0 ID=cds-WP_000433282.1;Parent=gene-CCO56_RS11900;Dbxref=GenBank:WP_000433282.1;Name=WP_000433282.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=CCO56_RS11900;product=NAD-dependent DNA ligase LigA;protein_id=WP_000433282.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 216362 216580 . + . ID=gene-CCO56_RS11905;Name=CCO56_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11905;old_locus_tag=CCO56_11905 NZ_NPMB01000005.1 Protein Homology CDS 216362 216580 . + 0 ID=cds-WP_001519708.1;Parent=gene-CCO56_RS11905;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=CCO56_RS11905;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 216577 217575 . - . ID=gene-CCO56_RS11910;Name=CCO56_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11910;old_locus_tag=CCO56_11910 NZ_NPMB01000005.1 Protein Homology CDS 216577 217575 . - 0 ID=cds-WP_080177330.1;Parent=gene-CCO56_RS11910;Dbxref=GenBank:WP_080177330.1;Name=WP_080177330.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=CCO56_RS11910;product=bile acid:sodium symporter family protein;protein_id=WP_080177330.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 217665 218591 . + . ID=gene-CCO56_RS11915;Name=CCO56_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11915;old_locus_tag=CCO56_11915 NZ_NPMB01000005.1 Protein Homology CDS 217665 218591 . + 0 ID=cds-WP_094882051.1;Parent=gene-CCO56_RS11915;Dbxref=GenBank:WP_094882051.1;Name=WP_094882051.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=CCO56_RS11915;product=LysR family transcriptional regulator;protein_id=WP_094882051.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 218653 219414 . - . ID=gene-CCO56_RS11920;Name=CCO56_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11920;old_locus_tag=CCO56_11920 NZ_NPMB01000005.1 Protein Homology CDS 218653 219414 . - 0 ID=cds-WP_080177331.1;Parent=gene-CCO56_RS11920;Dbxref=GenBank:WP_080177331.1;Name=WP_080177331.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=CCO56_RS11920;product=outer membrane protein OmpK;protein_id=WP_080177331.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 219670 220503 . + . ID=gene-CCO56_RS11925;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=CCO56_RS11925;old_locus_tag=CCO56_11925 NZ_NPMB01000005.1 Protein Homology CDS 219670 220503 . + 0 ID=cds-WP_080177332.1;Parent=gene-CCO56_RS11925;Dbxref=GenBank:WP_080177332.1;Name=WP_080177332.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=CCO56_RS11925;product=xanthosine phosphorylase;protein_id=WP_080177332.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 220558 221814 . + . ID=gene-CCO56_RS11930;Name=CCO56_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11930;old_locus_tag=CCO56_11930 NZ_NPMB01000005.1 Protein Homology CDS 220558 221814 . + 0 ID=cds-WP_000513240.1;Parent=gene-CCO56_RS11930;Dbxref=GenBank:WP_000513240.1;Name=WP_000513240.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=CCO56_RS11930;product=nucleoside permease;protein_id=WP_000513240.1;transl_table=11 NZ_NPMB01000005.1 RefSeq pseudogene 221873 222030 . + . ID=gene-CCO56_RS11935;Name=CCO56_RS11935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS11935;old_locus_tag=CCO56_11935;pseudo=true NZ_NPMB01000005.1 Protein Homology CDS 221873 222030 . + 0 ID=cds-CCO56_RS11935;Parent=gene-CCO56_RS11935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=CCO56_RS11935;product=XapX domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 222082 222966 . + . ID=gene-CCO56_RS11940;Name=CCO56_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11940;old_locus_tag=CCO56_11940 NZ_NPMB01000005.1 Protein Homology CDS 222082 222966 . + 0 ID=cds-WP_000438884.1;Parent=gene-CCO56_RS11940;Dbxref=GenBank:WP_000438884.1;Name=WP_000438884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=CCO56_RS11940;product=LysR family transcriptional regulator;protein_id=WP_000438884.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 223130 223205 . - . ID=gene-CCO56_RS11945;Name=CCO56_RS11945;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS11945;old_locus_tag=CCO56_11945 NZ_NPMB01000005.1 tRNAscan-SE tRNA 223130 223205 . - . ID=rna-CCO56_RS11945;Parent=gene-CCO56_RS11945;anticodon=(pos:complement(223170..223172));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11945;product=tRNA-Lys NZ_NPMB01000005.1 tRNAscan-SE exon 223130 223205 . - . ID=exon-CCO56_RS11945-1;Parent=rna-CCO56_RS11945;anticodon=(pos:complement(223170..223172));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11945;product=tRNA-Lys NZ_NPMB01000005.1 RefSeq gene 223210 223285 . - . ID=gene-CCO56_RS11950;Name=CCO56_RS11950;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS11950;old_locus_tag=CCO56_11950 NZ_NPMB01000005.1 tRNAscan-SE tRNA 223210 223285 . - . ID=rna-CCO56_RS11950;Parent=gene-CCO56_RS11950;anticodon=(pos:complement(223250..223252));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11950;product=tRNA-Val NZ_NPMB01000005.1 tRNAscan-SE exon 223210 223285 . - . ID=exon-CCO56_RS11950-1;Parent=rna-CCO56_RS11950;anticodon=(pos:complement(223250..223252));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11950;product=tRNA-Val NZ_NPMB01000005.1 RefSeq gene 223327 223402 . - . ID=gene-CCO56_RS11955;Name=CCO56_RS11955;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS11955;old_locus_tag=CCO56_11955 NZ_NPMB01000005.1 tRNAscan-SE tRNA 223327 223402 . - . ID=rna-CCO56_RS11955;Parent=gene-CCO56_RS11955;anticodon=(pos:complement(223367..223369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11955;product=tRNA-Val NZ_NPMB01000005.1 tRNAscan-SE exon 223327 223402 . - . ID=exon-CCO56_RS11955-1;Parent=rna-CCO56_RS11955;anticodon=(pos:complement(223367..223369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11955;product=tRNA-Val NZ_NPMB01000005.1 RefSeq gene 223448 223523 . - . ID=gene-CCO56_RS11960;Name=CCO56_RS11960;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS11960;old_locus_tag=CCO56_11960 NZ_NPMB01000005.1 tRNAscan-SE tRNA 223448 223523 . - . ID=rna-CCO56_RS11960;Parent=gene-CCO56_RS11960;anticodon=(pos:complement(223488..223490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11960;product=tRNA-Val NZ_NPMB01000005.1 tRNAscan-SE exon 223448 223523 . - . ID=exon-CCO56_RS11960-1;Parent=rna-CCO56_RS11960;anticodon=(pos:complement(223488..223490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11960;product=tRNA-Val NZ_NPMB01000005.1 RefSeq gene 223782 225197 . + . ID=gene-CCO56_RS11965;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CCO56_RS11965;old_locus_tag=CCO56_11965 NZ_NPMB01000005.1 Protein Homology CDS 223782 225197 . + 0 ID=cds-WP_000695623.1;Parent=gene-CCO56_RS11965;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=CCO56_RS11965;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 225251 225643 . - . ID=gene-CCO56_RS11970;Name=CCO56_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11970;old_locus_tag=CCO56_11970 NZ_NPMB01000005.1 Protein Homology CDS 225251 225643 . - 0 ID=cds-WP_000826514.1;Parent=gene-CCO56_RS11970;Dbxref=GenBank:WP_000826514.1;Name=WP_000826514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=CCO56_RS11970;product=MerR family transcriptional regulator;protein_id=WP_000826514.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 225645 226007 . - . ID=gene-CCO56_RS11975;Name=CCO56_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11975;old_locus_tag=CCO56_11975 NZ_NPMB01000005.1 Protein Homology CDS 225645 226007 . - 0 ID=cds-WP_000472034.1;Parent=gene-CCO56_RS11975;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=CCO56_RS11975;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 226229 226304 . + . ID=gene-CCO56_RS11985;Name=CCO56_RS11985;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS11985;old_locus_tag=CCO56_11985 NZ_NPMB01000005.1 tRNAscan-SE tRNA 226229 226304 . + . ID=rna-CCO56_RS11985;Parent=gene-CCO56_RS11985;anticodon=(pos:226262..226264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11985;product=tRNA-Ala NZ_NPMB01000005.1 tRNAscan-SE exon 226229 226304 . + . ID=exon-CCO56_RS11985-1;Parent=rna-CCO56_RS11985;anticodon=(pos:226262..226264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11985;product=tRNA-Ala NZ_NPMB01000005.1 RefSeq gene 226347 226422 . + . ID=gene-CCO56_RS11990;Name=CCO56_RS11990;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS11990;old_locus_tag=CCO56_11990 NZ_NPMB01000005.1 tRNAscan-SE tRNA 226347 226422 . + . ID=rna-CCO56_RS11990;Parent=gene-CCO56_RS11990;anticodon=(pos:226380..226382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11990;product=tRNA-Ala NZ_NPMB01000005.1 tRNAscan-SE exon 226347 226422 . + . ID=exon-CCO56_RS11990-1;Parent=rna-CCO56_RS11990;anticodon=(pos:226380..226382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS11990;product=tRNA-Ala NZ_NPMB01000005.1 RefSeq gene 226613 228802 . + . ID=gene-CCO56_RS11995;Name=CCO56_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS11995;old_locus_tag=CCO56_11995 NZ_NPMB01000005.1 Protein Homology CDS 226613 228802 . + 0 ID=cds-WP_080177213.1;Parent=gene-CCO56_RS11995;Dbxref=GenBank:WP_080177213.1;Name=WP_080177213.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=CCO56_RS11995;product=EAL domain-containing protein;protein_id=WP_080177213.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 228855 230057 . - . ID=gene-CCO56_RS12000;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=CCO56_RS12000;old_locus_tag=CCO56_12000 NZ_NPMB01000005.1 Protein Homology CDS 228855 230057 . - 0 ID=cds-WP_000376343.1;Parent=gene-CCO56_RS12000;Dbxref=GenBank:WP_000376343.1;Name=WP_000376343.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=CCO56_RS12000;product=nucleoside permease NupC;protein_id=WP_000376343.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 230363 230407 . + . ID=gene-CCO56_RS24155;Name=CCO56_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24155 NZ_NPMB01000005.1 Protein Homology CDS 230363 230407 . + 0 ID=cds-WP_418338175.1;Parent=gene-CCO56_RS24155;Dbxref=GenBank:WP_418338175.1;Name=WP_418338175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=CCO56_RS24155;product=hypothetical protein;protein_id=WP_418338175.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 230400 231641 . + . ID=gene-CCO56_RS12005;Name=CCO56_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12005;old_locus_tag=CCO56_12005 NZ_NPMB01000005.1 Protein Homology CDS 230400 231641 . + 0 ID=cds-WP_000131734.1;Parent=gene-CCO56_RS12005;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=CCO56_RS12005;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 231702 232028 . - . ID=gene-CCO56_RS12010;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=CCO56_RS12010;old_locus_tag=CCO56_12010 NZ_NPMB01000005.1 Protein Homology CDS 231702 232028 . - 0 ID=cds-WP_000490091.1;Parent=gene-CCO56_RS12010;Dbxref=GenBank:WP_000490091.1;Name=WP_000490091.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=CCO56_RS12010;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490091.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 232142 233140 . - . ID=gene-CCO56_RS12015;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CCO56_RS12015;old_locus_tag=CCO56_12015 NZ_NPMB01000005.1 Protein Homology CDS 232142 233140 . - 0 ID=cds-WP_000640283.1;Parent=gene-CCO56_RS12015;Dbxref=GenBank:WP_000640283.1;Name=WP_000640283.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=CCO56_RS12015;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000640283.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 233320 234972 . + . ID=gene-CCO56_RS12020;Name=CCO56_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12020;old_locus_tag=CCO56_12020 NZ_NPMB01000005.1 Protein Homology CDS 233320 234972 . + 0 ID=cds-WP_080177212.1;Parent=gene-CCO56_RS12020;Dbxref=GenBank:WP_080177212.1;Name=WP_080177212.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=CCO56_RS12020;product=alpha-keto acid decarboxylase family protein;protein_id=WP_080177212.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 234992 236227 . - . ID=gene-CCO56_RS12025;Name=CCO56_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12025;old_locus_tag=CCO56_12025 NZ_NPMB01000005.1 Protein Homology CDS 234992 236227 . - 0 ID=cds-WP_000468932.1;Parent=gene-CCO56_RS12025;Dbxref=GenBank:WP_000468932.1;Name=WP_000468932.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=CCO56_RS12025;product=ion channel protein;protein_id=WP_000468932.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 236431 237396 . + . ID=gene-CCO56_RS12030;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=CCO56_RS12030;old_locus_tag=CCO56_12030 NZ_NPMB01000005.1 Protein Homology CDS 236431 237396 . + 0 ID=cds-WP_000170372.1;Parent=gene-CCO56_RS12030;Dbxref=GenBank:WP_000170372.1;Name=WP_000170372.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=CCO56_RS12030;product=glucokinase;protein_id=WP_000170372.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 237672 237998 . + . ID=gene-CCO56_RS12035;Name=CCO56_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12035;old_locus_tag=CCO56_12035 NZ_NPMB01000005.1 Protein Homology CDS 237672 237998 . + 0 ID=cds-WP_000162759.1;Parent=gene-CCO56_RS12035;Dbxref=GenBank:WP_000162759.1;Name=WP_000162759.1;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162759.1;locus_tag=CCO56_RS12035;product=PTS fructose transporter subunit IIB;protein_id=WP_000162759.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 238019 239266 . + . ID=gene-CCO56_RS12040;Name=CCO56_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12040;old_locus_tag=CCO56_12040 NZ_NPMB01000005.1 Protein Homology CDS 238019 239266 . + 0 ID=cds-WP_094882052.1;Parent=gene-CCO56_RS12040;Dbxref=GenBank:WP_094882052.1;Name=WP_094882052.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311293.1;locus_tag=CCO56_RS12040;product=PTS fructose transporter subunit IIC;protein_id=WP_094882052.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 239283 240365 . + . ID=gene-CCO56_RS12045;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;locus_tag=CCO56_RS12045;old_locus_tag=CCO56_12045 NZ_NPMB01000005.1 Protein Homology CDS 239283 240365 . + 0 ID=cds-WP_080177210.1;Parent=gene-CCO56_RS12045;Dbxref=GenBank:WP_080177210.1;Name=WP_080177210.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypdF;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000173254.1;locus_tag=CCO56_RS12045;product=aminopeptidase;protein_id=WP_080177210.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 240365 241405 . + . ID=gene-CCO56_RS12050;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=CCO56_RS12050;old_locus_tag=CCO56_12050 NZ_NPMB01000005.1 Protein Homology CDS 240365 241405 . + 0 ID=cds-WP_063917234.1;Parent=gene-CCO56_RS12050;Dbxref=GenBank:WP_063917234.1;Name=WP_063917234.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406419.1;locus_tag=CCO56_RS12050;product=aminopeptidase;protein_id=WP_063917234.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 241427 243922 . + . ID=gene-CCO56_RS12055;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO56_RS12055;old_locus_tag=CCO56_12055 NZ_NPMB01000005.1 Protein Homology CDS 241427 243922 . + 0 ID=cds-WP_001528500.1;Parent=gene-CCO56_RS12055;Dbxref=GenBank:WP_001528500.1;Name=WP_001528500.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708251.1;locus_tag=CCO56_RS12055;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001528500.1;transl_table=11 NZ_NPMB01000005.1 RefSeq pseudogene 243936 244016 . + . ID=gene-CCO56_RS24160;Name=CCO56_RS24160;end_range=244016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24160;partial=true;pseudo=true;start_range=.,243936 NZ_NPMB01000005.1 Protein Homology CDS 243936 244016 . + 0 ID=cds-CCO56_RS24160;Parent=gene-CCO56_RS24160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=244016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO56_RS24160;partial=true;product=hypothetical protein;pseudo=true;start_range=.,243936;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 244024 244878 . - . ID=gene-CCO56_RS12060;Name=CCO56_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12060;old_locus_tag=CCO56_12060 NZ_NPMB01000005.1 Protein Homology CDS 244024 244878 . - 0 ID=cds-WP_001528431.1;Parent=gene-CCO56_RS12060;Dbxref=GenBank:WP_001528431.1;Name=WP_001528431.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750529.1;locus_tag=CCO56_RS12060;product=AraC family transcriptional regulator;protein_id=WP_001528431.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 245466 246704 . + . ID=gene-CCO56_RS12065;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=CCO56_RS12065;old_locus_tag=CCO56_12065 NZ_NPMB01000005.1 Protein Homology CDS 245466 246704 . + 0 ID=cds-WP_000763118.1;Parent=gene-CCO56_RS12065;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=CCO56_RS12065;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 246754 246825 . - . ID=gene-CCO56_RS12070;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=CCO56_RS12070;old_locus_tag=CCO56_12070 NZ_NPMB01000005.1 Protein Homology CDS 246754 246825 . - 0 ID=cds-WP_010723117.1;Parent=gene-CCO56_RS12070;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=CCO56_RS12070;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 247228 248148 . - . ID=gene-CCO56_RS12075;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=CCO56_RS12075;old_locus_tag=CCO56_12075 NZ_NPMB01000005.1 Protein Homology CDS 247228 248148 . - 0 ID=cds-WP_000492778.1;Parent=gene-CCO56_RS12075;Dbxref=GenBank:WP_000492778.1;Name=WP_000492778.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=CCO56_RS12075;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000492778.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 248670 248912 . + . ID=gene-CCO56_RS12080;Name=CCO56_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12080;old_locus_tag=CCO56_12080 NZ_NPMB01000005.1 Protein Homology CDS 248670 248912 . + 0 ID=cds-WP_000639889.1;Parent=gene-CCO56_RS12080;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=CCO56_RS12080;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 249151 250542 . - . ID=gene-CCO56_RS12085;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=CCO56_RS12085;old_locus_tag=CCO56_12085 NZ_NPMB01000005.1 Protein Homology CDS 249151 250542 . - 0 ID=cds-WP_000955747.1;Parent=gene-CCO56_RS12085;Dbxref=GenBank:WP_000955747.1;Name=WP_000955747.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=CCO56_RS12085;product=phosphoglycerate transporter PgtP;protein_id=WP_000955747.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 250978 252171 . + . ID=gene-CCO56_RS12095;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=CCO56_RS12095;old_locus_tag=CCO56_12095 NZ_NPMB01000005.1 Protein Homology CDS 250978 252171 . + 0 ID=cds-WP_000467985.1;Parent=gene-CCO56_RS12095;Dbxref=GenBank:WP_000467985.1;Name=WP_000467985.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=CCO56_RS12095;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467985.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 252168 254174 . + . ID=gene-CCO56_RS12100;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=CCO56_RS12100;old_locus_tag=CCO56_12100 NZ_NPMB01000005.1 Protein Homology CDS 252168 254174 . + 0 ID=cds-WP_000678493.1;Parent=gene-CCO56_RS12100;Dbxref=GenBank:WP_000678493.1;Name=WP_000678493.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=CCO56_RS12100;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000678493.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 254164 255411 . + . ID=gene-CCO56_RS12105;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=CCO56_RS12105;old_locus_tag=CCO56_12105 NZ_NPMB01000005.1 Protein Homology CDS 254164 255411 . + 0 ID=cds-WP_000930843.1;Parent=gene-CCO56_RS12105;Dbxref=GenBank:WP_000930843.1;Name=WP_000930843.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=CCO56_RS12105;product=two-component system response regulator PgtA;protein_id=WP_000930843.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 255679 256617 . + . ID=gene-CCO56_RS12110;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=CCO56_RS12110;old_locus_tag=CCO56_12110 NZ_NPMB01000005.1 Protein Homology CDS 255679 256617 . + 0 ID=cds-WP_080177209.1;Parent=gene-CCO56_RS12110;Dbxref=GenBank:WP_080177209.1;Name=WP_080177209.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=CCO56_RS12110;product=omptin family outer membrane protease PgtE;protein_id=WP_080177209.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 256774 256848 . - . ID=gene-CCO56_RS12115;Name=CCO56_RS12115;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS12115;old_locus_tag=CCO56_12115 NZ_NPMB01000005.1 tRNAscan-SE tRNA 256774 256848 . - . ID=rna-CCO56_RS12115;Parent=gene-CCO56_RS12115;anticodon=(pos:complement(256813..256815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS12115;product=tRNA-Arg NZ_NPMB01000005.1 tRNAscan-SE exon 256774 256848 . - . ID=exon-CCO56_RS12115-1;Parent=rna-CCO56_RS12115;anticodon=(pos:complement(256813..256815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS12115;product=tRNA-Arg NZ_NPMB01000005.1 RefSeq gene 256924 257865 . - . ID=gene-CCO56_RS12120;Name=CCO56_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12120;old_locus_tag=CCO56_12120 NZ_NPMB01000005.1 Protein Homology CDS 256924 257865 . - 0 ID=cds-WP_000377772.1;Parent=gene-CCO56_RS12120;Dbxref=GenBank:WP_000377772.1;Name=WP_000377772.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=CCO56_RS12120;product=formate/nitrite transporter family protein;protein_id=WP_000377772.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 258154 258909 . + . ID=gene-CCO56_RS12125;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=CCO56_RS12125;old_locus_tag=CCO56_12125 NZ_NPMB01000005.1 Protein Homology CDS 258154 258909 . + 0 ID=cds-WP_000776789.1;Parent=gene-CCO56_RS12125;Dbxref=GenBank:WP_000776789.1;Name=WP_000776789.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=CCO56_RS12125;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776789.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 258970 260277 . - . ID=gene-CCO56_RS12130;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=CCO56_RS12130;old_locus_tag=CCO56_12130 NZ_NPMB01000005.1 Protein Homology CDS 258970 260277 . - 0 ID=cds-WP_176207678.1;Parent=gene-CCO56_RS12130;Dbxref=GenBank:WP_176207678.1;Name=WP_176207678.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=CCO56_RS12130;product=long-chain fatty acid transporter FadL;protein_id=WP_176207678.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 260648 260932 . + . ID=gene-CCO56_RS12135;Name=CCO56_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12135;old_locus_tag=CCO56_12135 NZ_NPMB01000005.1 Protein Homology CDS 260648 260932 . + 0 ID=cds-WP_023136739.1;Parent=gene-CCO56_RS12135;Dbxref=GenBank:WP_023136739.1;Name=WP_023136739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=CCO56_RS12135;product=YfcZ/YiiS family protein;protein_id=WP_023136739.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 261110 262420 . + . ID=gene-CCO56_RS12140;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=CCO56_RS12140;old_locus_tag=CCO56_12140 NZ_NPMB01000005.1 Protein Homology CDS 261110 262420 . + 0 ID=cds-WP_023136740.1;Parent=gene-CCO56_RS12140;Dbxref=GenBank:WP_023136740.1;Name=WP_023136740.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=CCO56_RS12140;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_023136740.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 262420 264567 . + . ID=gene-CCO56_RS12145;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=CCO56_RS12145;old_locus_tag=CCO56_12145 NZ_NPMB01000005.1 Protein Homology CDS 262420 264567 . + 0 ID=cds-WP_080177206.1;Parent=gene-CCO56_RS12145;Dbxref=GenBank:WP_080177206.1;Name=WP_080177206.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=CCO56_RS12145;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_080177206.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 264776 265261 . + . ID=gene-CCO56_RS12150;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=CCO56_RS12150;old_locus_tag=CCO56_12150 NZ_NPMB01000005.1 Protein Homology CDS 264776 265261 . + 0 ID=cds-WP_001195801.1;Parent=gene-CCO56_RS12150;Dbxref=GenBank:WP_001195801.1;Name=WP_001195801.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=CCO56_RS12150;product=phosphohistidine phosphatase SixA;protein_id=WP_001195801.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 265361 265912 . - . ID=gene-CCO56_RS12155;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=CCO56_RS12155;old_locus_tag=CCO56_12155 NZ_NPMB01000005.1 Protein Homology CDS 265361 265912 . - 0 ID=cds-WP_000730794.1;Parent=gene-CCO56_RS12155;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=CCO56_RS12155;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 266078 267010 . + . ID=gene-CCO56_RS12160;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=CCO56_RS12160;old_locus_tag=CCO56_12160 NZ_NPMB01000005.1 Protein Homology CDS 266078 267010 . + 0 ID=cds-WP_001542329.1;Parent=gene-CCO56_RS12160;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=CCO56_RS12160;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 267046 268131 . + . ID=gene-CCO56_RS12165;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CCO56_RS12165;old_locus_tag=CCO56_12165 NZ_NPMB01000005.1 Protein Homology CDS 267046 268131 . + 0 ID=cds-WP_000918457.1;Parent=gene-CCO56_RS12165;Dbxref=GenBank:WP_000918457.1;Name=WP_000918457.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=CCO56_RS12165;product=chorismate synthase;protein_id=WP_000918457.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 268135 268959 . + . ID=gene-CCO56_RS12170;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=CCO56_RS12170;old_locus_tag=CCO56_12170 NZ_NPMB01000005.1 Protein Homology CDS 268135 268959 . + 0 ID=cds-WP_000750429.1;Parent=gene-CCO56_RS12170;Dbxref=GenBank:WP_000750429.1;Name=WP_000750429.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=CCO56_RS12170;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750429.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 268959 269768 . + . ID=gene-CCO56_RS12175;Name=CCO56_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12175;old_locus_tag=CCO56_12175 NZ_NPMB01000005.1 Protein Homology CDS 268959 269768 . + 0 ID=cds-WP_000368599.1;Parent=gene-CCO56_RS12175;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=CCO56_RS12175;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 269768 270316 . + . ID=gene-CCO56_RS12180;Name=CCO56_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12180;old_locus_tag=CCO56_12180 NZ_NPMB01000005.1 Protein Homology CDS 269768 270316 . + 0 ID=cds-WP_001089211.1;Parent=gene-CCO56_RS12180;Dbxref=GenBank:WP_001089211.1;Name=WP_001089211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=CCO56_RS12180;product=elongation factor P hydroxylase;protein_id=WP_001089211.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 270349 270624 . + . ID=gene-CCO56_RS12185;Name=CCO56_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12185;old_locus_tag=CCO56_12185 NZ_NPMB01000005.1 Protein Homology CDS 270349 270624 . + 0 ID=cds-WP_000559749.1;Parent=gene-CCO56_RS12185;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=CCO56_RS12185;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 270676 272676 . - . ID=gene-CCO56_RS12190;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=CCO56_RS12190;old_locus_tag=CCO56_12190 NZ_NPMB01000005.1 Protein Homology CDS 270676 272676 . - 0 ID=cds-WP_000816078.1;Parent=gene-CCO56_RS12190;Dbxref=GenBank:WP_000816078.1;Name=WP_000816078.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=CCO56_RS12190;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_000816078.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 272836 274050 . + . ID=gene-CCO56_RS12195;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=CCO56_RS12195;old_locus_tag=CCO56_12195 NZ_NPMB01000005.1 Protein Homology CDS 272836 274050 . + 0 ID=cds-WP_000817161.1;Parent=gene-CCO56_RS12195;Dbxref=GenBank:WP_000817161.1;Name=WP_000817161.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=CCO56_RS12195;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 274148 274804 . + . ID=gene-CCO56_RS12200;Name=CCO56_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12200;old_locus_tag=CCO56_12200 NZ_NPMB01000005.1 Protein Homology CDS 274148 274804 . + 0 ID=cds-WP_001142909.1;Parent=gene-CCO56_RS12200;Dbxref=GenBank:WP_001142909.1;Name=WP_001142909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=CCO56_RS12200;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142909.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 274871 275389 . - . ID=gene-CCO56_RS12205;Name=CCO56_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12205;old_locus_tag=CCO56_12205 NZ_NPMB01000005.1 Protein Homology CDS 274871 275389 . - 0 ID=cds-WP_023212346.1;Parent=gene-CCO56_RS12205;Dbxref=GenBank:WP_023212346.1;Name=WP_023212346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=CCO56_RS12205;product=YbjP/YqhG family protein;protein_id=WP_023212346.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 275389 275757 . - . ID=gene-CCO56_RS12210;Name=CCO56_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12210;old_locus_tag=CCO56_12210 NZ_NPMB01000005.1 Protein Homology CDS 275389 275757 . - 0 ID=cds-WP_000118256.1;Parent=gene-CCO56_RS12210;Dbxref=GenBank:WP_000118256.1;Name=WP_000118256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=CCO56_RS12210;product=NlpC/P60 family protein;protein_id=WP_000118256.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 275926 276174 . - . ID=gene-CCO56_RS12215;Name=CCO56_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12215;old_locus_tag=CCO56_12215 NZ_NPMB01000005.1 Protein Homology CDS 275926 276174 . - 0 ID=cds-WP_000433429.1;Parent=gene-CCO56_RS12215;Dbxref=GenBank:WP_000433429.1;Name=WP_000433429.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=CCO56_RS12215;product=helix-turn-helix domain-containing protein;protein_id=WP_000433429.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 276347 276721 . + . ID=gene-CCO56_RS12220;Name=CCO56_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12220;old_locus_tag=CCO56_12220 NZ_NPMB01000005.1 Protein Homology CDS 276347 276721 . + 0 ID=cds-WP_001051266.1;Parent=gene-CCO56_RS12220;Dbxref=GenBank:WP_001051266.1;Name=WP_001051266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=CCO56_RS12220;product=hypothetical protein;protein_id=WP_001051266.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 276901 278079 . + . ID=gene-CCO56_RS12225;Name=CCO56_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12225;old_locus_tag=CCO56_12225 NZ_NPMB01000005.1 Protein Homology CDS 276901 278079 . + 0 ID=cds-WP_000127731.1;Parent=gene-CCO56_RS12225;Dbxref=GenBank:WP_000127731.1;Name=WP_000127731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=CCO56_RS12225;product=MFS transporter;protein_id=WP_000127731.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 278076 279077 . - . ID=gene-CCO56_RS12230;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=CCO56_RS12230;old_locus_tag=CCO56_12230 NZ_NPMB01000005.1 Protein Homology CDS 278076 279077 . - 0 ID=cds-WP_000553396.1;Parent=gene-CCO56_RS12230;Dbxref=GenBank:WP_000553396.1;Name=WP_000553396.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=CCO56_RS12230;product=flagella biosynthesis regulator Flk;protein_id=WP_000553396.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 279181 280317 . + . ID=gene-CCO56_RS12235;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=CCO56_RS12235;old_locus_tag=CCO56_12235 NZ_NPMB01000005.1 Protein Homology CDS 279181 280317 . + 0 ID=cds-WP_000699176.1;Parent=gene-CCO56_RS12235;Dbxref=GenBank:WP_000699176.1;Name=WP_000699176.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=CCO56_RS12235;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699176.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 280385 281398 . + . ID=gene-CCO56_RS12240;Name=CCO56_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12240;old_locus_tag=CCO56_12240 NZ_NPMB01000005.1 Protein Homology CDS 280385 281398 . + 0 ID=cds-WP_001289141.1;Parent=gene-CCO56_RS12240;Dbxref=GenBank:WP_001289141.1;Name=WP_001289141.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=CCO56_RS12240;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289141.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 281398 282210 . + . ID=gene-CCO56_RS12245;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CCO56_RS12245;old_locus_tag=CCO56_12245 NZ_NPMB01000005.1 Protein Homology CDS 281398 282210 . + 0 ID=cds-WP_000016631.1;Parent=gene-CCO56_RS12245;Dbxref=GenBank:WP_000016631.1;Name=WP_000016631.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=CCO56_RS12245;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016631.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 282259 282918 . + . ID=gene-CCO56_RS12250;Name=CCO56_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12250;old_locus_tag=CCO56_12250 NZ_NPMB01000005.1 Protein Homology CDS 282259 282918 . + 0 ID=cds-WP_000364318.1;Parent=gene-CCO56_RS12250;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=CCO56_RS12250;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 283068 283982 . + . ID=gene-CCO56_RS12255;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CCO56_RS12255;old_locus_tag=CCO56_12255 NZ_NPMB01000005.1 Protein Homology CDS 283068 283982 . + 0 ID=cds-WP_000118383.1;Parent=gene-CCO56_RS12255;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=CCO56_RS12255;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 284050 285318 . + . ID=gene-CCO56_RS12260;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=CCO56_RS12260;old_locus_tag=CCO56_12260 NZ_NPMB01000005.1 Protein Homology CDS 284050 285318 . + 0 ID=cds-WP_000792285.1;Parent=gene-CCO56_RS12260;Dbxref=GenBank:WP_000792285.1;Name=WP_000792285.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=CCO56_RS12260;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000792285.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 285308 285982 . + . ID=gene-CCO56_RS12265;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=CCO56_RS12265;old_locus_tag=CCO56_12265 NZ_NPMB01000005.1 Protein Homology CDS 285308 285982 . + 0 ID=cds-WP_000157041.1;Parent=gene-CCO56_RS12265;Dbxref=GenBank:WP_000157041.1;Name=WP_000157041.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=CCO56_RS12265;product=cell division protein DedD;protein_id=WP_000157041.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 286293 286781 . + . ID=gene-CCO56_RS12270;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=CCO56_RS12270;old_locus_tag=CCO56_12270 NZ_NPMB01000005.1 Protein Homology CDS 286293 286781 . + 0 ID=cds-WP_000262102.1;Parent=gene-CCO56_RS12270;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=CCO56_RS12270;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 286819 288336 . + . ID=gene-CCO56_RS12275;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CCO56_RS12275;old_locus_tag=CCO56_12275 NZ_NPMB01000005.1 Protein Homology CDS 286819 288336 . + 0 ID=cds-WP_000334205.1;Parent=gene-CCO56_RS12275;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=CCO56_RS12275;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 288372 289799 . - . ID=gene-CCO56_RS12280;Name=CCO56_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12280;old_locus_tag=CCO56_12280 NZ_NPMB01000005.1 Protein Homology CDS 288372 289799 . - 0 ID=cds-WP_000168925.1;Parent=gene-CCO56_RS12280;Dbxref=GenBank:WP_000168925.1;Name=WP_000168925.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=CCO56_RS12280;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168925.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 290010 291407 . + . ID=gene-CCO56_RS12285;Name=CCO56_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12285;old_locus_tag=CCO56_12285 NZ_NPMB01000005.1 Protein Homology CDS 290010 291407 . + 0 ID=cds-WP_000132306.1;Parent=gene-CCO56_RS12285;Dbxref=GenBank:WP_000132306.1;Name=WP_000132306.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=CCO56_RS12285;product=diaminopimelate decarboxylase family protein;protein_id=WP_000132306.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 291498 292919 . + . ID=gene-CCO56_RS12290;Name=CCO56_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12290;old_locus_tag=CCO56_12290 NZ_NPMB01000005.1 Protein Homology CDS 291498 292919 . + 0 ID=cds-WP_000072512.1;Parent=gene-CCO56_RS12290;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=CCO56_RS12290;product=APC family permease;protein_id=WP_000072512.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 292921 294024 . + . ID=gene-CCO56_RS12295;Name=CCO56_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12295;old_locus_tag=CCO56_12295 NZ_NPMB01000005.1 Protein Homology CDS 292921 294024 . + 0 ID=cds-WP_015406425.1;Parent=gene-CCO56_RS12295;Dbxref=GenBank:WP_015406425.1;Name=WP_015406425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=CCO56_RS12295;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_015406425.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 294088 295494 . + . ID=gene-CCO56_RS12300;Name=CCO56_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12300;old_locus_tag=CCO56_12300 NZ_NPMB01000005.1 Protein Homology CDS 294088 295494 . + 0 ID=cds-WP_000380353.1;Parent=gene-CCO56_RS12300;Dbxref=GenBank:WP_000380353.1;Name=WP_000380353.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=CCO56_RS12300;product=amino acid permease;protein_id=WP_000380353.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 295521 296090 . + . ID=gene-CCO56_RS12305;Name=CCO56_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12305;old_locus_tag=CCO56_12305 NZ_NPMB01000005.1 Protein Homology CDS 295521 296090 . + 0 ID=cds-WP_000825682.1;Parent=gene-CCO56_RS12305;Dbxref=GenBank:WP_000825682.1;Name=WP_000825682.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=CCO56_RS12305;product=UbiX family flavin prenyltransferase;protein_id=WP_000825682.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 296379 297161 . + . ID=gene-CCO56_RS12315;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=CCO56_RS12315;old_locus_tag=CCO56_12315 NZ_NPMB01000005.1 Protein Homology CDS 296379 297161 . + 0 ID=cds-WP_000754418.1;Parent=gene-CCO56_RS12315;Dbxref=GenBank:WP_000754418.1;Name=WP_000754418.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=CCO56_RS12315;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754418.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 297399 298181 . + . ID=gene-CCO56_RS12320;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=CCO56_RS12320;old_locus_tag=CCO56_12320 NZ_NPMB01000005.1 Protein Homology CDS 297399 298181 . + 0 ID=cds-WP_000731868.1;Parent=gene-CCO56_RS12320;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=CCO56_RS12320;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 298364 299050 . + . ID=gene-CCO56_RS12325;Name=CCO56_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12325;old_locus_tag=CCO56_12325 NZ_NPMB01000005.1 Protein Homology CDS 298364 299050 . + 0 ID=cds-WP_000965498.1;Parent=gene-CCO56_RS12325;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=CCO56_RS12325;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 299047 299754 . + . ID=gene-CCO56_RS12330;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=CCO56_RS12330;old_locus_tag=CCO56_12330 NZ_NPMB01000005.1 Protein Homology CDS 299047 299754 . + 0 ID=cds-WP_000569757.1;Parent=gene-CCO56_RS12330;Dbxref=GenBank:WP_000569757.1;Name=WP_000569757.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=CCO56_RS12330;product=histidine ABC transporter permease HisM;protein_id=WP_000569757.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 299768 300541 . + . ID=gene-CCO56_RS12335;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=CCO56_RS12335;old_locus_tag=CCO56_12335 NZ_NPMB01000005.1 Protein Homology CDS 299768 300541 . + 0 ID=cds-WP_023212349.1;Parent=gene-CCO56_RS12335;Dbxref=GenBank:WP_023212349.1;Name=WP_023212349.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=CCO56_RS12335;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_023212349.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 300593 301486 . - . ID=gene-CCO56_RS12340;Name=CCO56_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12340;old_locus_tag=CCO56_12340 NZ_NPMB01000005.1 Protein Homology CDS 300593 301486 . - 0 ID=cds-WP_001166272.1;Parent=gene-CCO56_RS12340;Dbxref=GenBank:WP_001166272.1;Name=WP_001166272.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=CCO56_RS12340;product=TIGR01777 family oxidoreductase;protein_id=WP_001166272.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 301612 302259 . - . ID=gene-CCO56_RS12345;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=CCO56_RS12345;old_locus_tag=CCO56_12345 NZ_NPMB01000005.1 Protein Homology CDS 301612 302259 . - 0 ID=cds-WP_000566563.1;Parent=gene-CCO56_RS12345;Dbxref=GenBank:WP_000566563.1;Name=WP_000566563.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=CCO56_RS12345;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566563.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 302402 303046 . + . ID=gene-CCO56_RS12350;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=CCO56_RS12350;old_locus_tag=CCO56_12350 NZ_NPMB01000005.1 Protein Homology CDS 302402 303046 . + 0 ID=cds-WP_000043010.1;Parent=gene-CCO56_RS12350;Dbxref=GenBank:WP_000043010.1;Name=WP_000043010.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=CCO56_RS12350;product=glutathione transferase;protein_id=WP_000043010.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 303102 303653 . + . ID=gene-CCO56_RS12355;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=CCO56_RS12355;old_locus_tag=CCO56_12355 NZ_NPMB01000005.1 Protein Homology CDS 303102 303653 . + 0 ID=cds-WP_000772458.1;Parent=gene-CCO56_RS12355;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=CCO56_RS12355;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 303710 304264 . + . ID=gene-CCO56_RS12360;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=CCO56_RS12360;old_locus_tag=CCO56_12360 NZ_NPMB01000005.1 Protein Homology CDS 303710 304264 . + 0 ID=cds-WP_000230214.1;Parent=gene-CCO56_RS12360;Dbxref=GenBank:WP_000230214.1;Name=WP_000230214.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=CCO56_RS12360;product=NUDIX hydrolase YfcD;protein_id=WP_000230214.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 304270 305289 . - . ID=gene-CCO56_RS12365;Name=CCO56_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12365;old_locus_tag=CCO56_12365 NZ_NPMB01000005.1 Protein Homology CDS 304270 305289 . - 0 ID=cds-WP_000026949.1;Parent=gene-CCO56_RS12365;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=CCO56_RS12365;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 305542 305985 . + . ID=gene-CCO56_RS12375;Name=CCO56_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12375;old_locus_tag=CCO56_12375 NZ_NPMB01000005.1 Protein Homology CDS 305542 305985 . + 0 ID=cds-WP_080177195.1;Parent=gene-CCO56_RS12375;Dbxref=GenBank:WP_080177195.1;Name=WP_080177195.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=CCO56_RS12375;product=PTS sugar transporter subunit IIA;protein_id=WP_080177195.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 306066 306338 . + . ID=gene-CCO56_RS12380;Name=CCO56_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12380;old_locus_tag=CCO56_12380 NZ_NPMB01000005.1 Protein Homology CDS 306066 306338 . + 0 ID=cds-WP_000699818.1;Parent=gene-CCO56_RS12380;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=CCO56_RS12380;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 306359 307750 . + . ID=gene-CCO56_RS12385;Name=CCO56_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12385;old_locus_tag=CCO56_12385 NZ_NPMB01000005.1 Protein Homology CDS 306359 307750 . + 0 ID=cds-WP_001522266.1;Parent=gene-CCO56_RS12385;Dbxref=GenBank:WP_001522266.1;Name=WP_001522266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=CCO56_RS12385;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001522266.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 307747 308577 . + . ID=gene-CCO56_RS12390;Name=CCO56_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12390;old_locus_tag=CCO56_12390 NZ_NPMB01000005.1 Protein Homology CDS 307747 308577 . + 0 ID=cds-WP_001103272.1;Parent=gene-CCO56_RS12390;Dbxref=GenBank:WP_001103272.1;Name=WP_001103272.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=CCO56_RS12390;product=transketolase;protein_id=WP_001103272.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 308570 309523 . + . ID=gene-CCO56_RS12395;Name=CCO56_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12395;old_locus_tag=CCO56_12395 NZ_NPMB01000005.1 Protein Homology CDS 308570 309523 . + 0 ID=cds-WP_094882053.1;Parent=gene-CCO56_RS12395;Dbxref=GenBank:WP_094882053.1;Name=WP_094882053.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=CCO56_RS12395;product=transketolase family protein;protein_id=WP_094882053.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 309572 311092 . - . ID=gene-CCO56_RS12400;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=CCO56_RS12400;old_locus_tag=CCO56_12400 NZ_NPMB01000005.1 Protein Homology CDS 309572 311092 . - 0 ID=cds-WP_000117932.1;Parent=gene-CCO56_RS12400;Dbxref=GenBank:WP_000117932.1;Name=WP_000117932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=CCO56_RS12400;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117932.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 311310 313454 . - . ID=gene-CCO56_RS12405;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO56_RS12405;old_locus_tag=CCO56_12405 NZ_NPMB01000005.1 Protein Homology CDS 311310 313454 . - 0 ID=cds-WP_000086690.1;Parent=gene-CCO56_RS12405;Dbxref=GenBank:WP_000086690.1;Name=WP_000086690.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=CCO56_RS12405;product=phosphate acetyltransferase;protein_id=WP_000086690.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 313531 314733 . - . ID=gene-CCO56_RS12410;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=CCO56_RS12410;old_locus_tag=CCO56_12410 NZ_NPMB01000005.1 Protein Homology CDS 313531 314733 . - 0 ID=cds-WP_000095689.1;Parent=gene-CCO56_RS12410;Dbxref=GenBank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=CCO56_RS12410;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 315073 315528 . + . ID=gene-CCO56_RS12415;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=CCO56_RS12415;old_locus_tag=CCO56_12415 NZ_NPMB01000005.1 Protein Homology CDS 315073 315528 . + 0 ID=cds-WP_023232857.1;Parent=gene-CCO56_RS12415;Dbxref=GenBank:WP_023232857.1;Name=WP_023232857.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=CCO56_RS12415;product=terminus macrodomain insulation protein YfbV;protein_id=WP_023232857.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 315611 316105 . + . ID=gene-CCO56_RS12420;Name=CCO56_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12420;old_locus_tag=CCO56_12420 NZ_NPMB01000005.1 Protein Homology CDS 315611 316105 . + 0 ID=cds-WP_000426135.1;Parent=gene-CCO56_RS12420;Dbxref=GenBank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=CCO56_RS12420;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 316098 316775 . + . ID=gene-CCO56_RS12425;Name=CCO56_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12425;old_locus_tag=CCO56_12425 NZ_NPMB01000005.1 Protein Homology CDS 316098 316775 . + 0 ID=cds-WP_001555201.1;Parent=gene-CCO56_RS12425;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=CCO56_RS12425;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 316852 318678 . + . ID=gene-CCO56_RS12430;Name=CCO56_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12430;old_locus_tag=CCO56_12430 NZ_NPMB01000005.1 Protein Homology CDS 316852 318678 . + 0 ID=cds-WP_023232858.1;Parent=gene-CCO56_RS12430;Dbxref=GenBank:WP_023232858.1;Name=WP_023232858.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=CCO56_RS12430;product=SLC13 family permease;protein_id=WP_023232858.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 318784 319383 . - . ID=gene-CCO56_RS12435;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=CCO56_RS12435;old_locus_tag=CCO56_12435 NZ_NPMB01000005.1 Protein Homology CDS 318784 319383 . - 0 ID=cds-WP_000813882.1;Parent=gene-CCO56_RS12435;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=CCO56_RS12435;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 319477 320691 . - . ID=gene-CCO56_RS12440;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=CCO56_RS12440;old_locus_tag=CCO56_12440 NZ_NPMB01000005.1 Protein Homology CDS 319477 320691 . - 0 ID=cds-WP_000074540.1;Parent=gene-CCO56_RS12440;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=CCO56_RS12440;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 321623 322561 . + . ID=gene-CCO56_RS12450;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=CCO56_RS12450;old_locus_tag=CCO56_12450 NZ_NPMB01000005.1 Protein Homology CDS 321623 322561 . + 0 ID=cds-WP_000606288.1;Parent=gene-CCO56_RS12450;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=CCO56_RS12450;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 322641 322793 . + . ID=gene-CCO56_RS12455;Name=CCO56_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12455;old_locus_tag=CCO56_12455 NZ_NPMB01000005.1 Protein Homology CDS 322641 322793 . + 0 ID=cds-WP_001121022.1;Parent=gene-CCO56_RS12455;Dbxref=GenBank:WP_001121022.1;Name=WP_001121022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=CCO56_RS12455;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001121022.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 323188 323631 . + . ID=gene-CCO56_RS12460;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=CCO56_RS12460;old_locus_tag=CCO56_12460 NZ_NPMB01000005.1 Protein Homology CDS 323188 323631 . + 0 ID=cds-WP_000062993.1;Parent=gene-CCO56_RS12460;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=CCO56_RS12460;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 323647 324309 . + . ID=gene-CCO56_RS12465;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=CCO56_RS12465;old_locus_tag=CCO56_12465 NZ_NPMB01000005.1 Protein Homology CDS 323647 324309 . + 0 ID=cds-WP_000386728.1;Parent=gene-CCO56_RS12465;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=CCO56_RS12465;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 324396 326198 . + . ID=gene-CCO56_RS12470;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=CCO56_RS12470;old_locus_tag=CCO56_12470 NZ_NPMB01000005.1 Protein Homology CDS 324396 326198 . + 0 ID=cds-WP_000247855.1;Parent=gene-CCO56_RS12470;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=CCO56_RS12470;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 326201 326701 . + . ID=gene-CCO56_RS12475;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=CCO56_RS12475;old_locus_tag=CCO56_12475 NZ_NPMB01000005.1 Protein Homology CDS 326201 326701 . + 0 ID=cds-WP_000545038.1;Parent=gene-CCO56_RS12475;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=CCO56_RS12475;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 326698 328035 . + . ID=gene-CCO56_RS12480;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=CCO56_RS12480;old_locus_tag=CCO56_12480 NZ_NPMB01000005.1 Protein Homology CDS 326698 328035 . + 0 ID=cds-WP_000800048.1;Parent=gene-CCO56_RS12480;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=CCO56_RS12480;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 328066 330792 . + . ID=gene-CCO56_RS12485;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=CCO56_RS12485;old_locus_tag=CCO56_12485 NZ_NPMB01000005.1 Protein Homology CDS 328066 330792 . + 0 ID=cds-WP_001528469.1;Parent=gene-CCO56_RS12485;Dbxref=GenBank:WP_001528469.1;Name=WP_001528469.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=CCO56_RS12485;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001528469.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 330789 331766 . + . ID=gene-CCO56_RS12490;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=CCO56_RS12490;old_locus_tag=CCO56_12490 NZ_NPMB01000005.1 Protein Homology CDS 330789 331766 . + 0 ID=cds-WP_000118515.1;Parent=gene-CCO56_RS12490;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=CCO56_RS12490;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 331781 332323 . + . ID=gene-CCO56_RS12495;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=CCO56_RS12495;old_locus_tag=CCO56_12495 NZ_NPMB01000005.1 Protein Homology CDS 331781 332323 . + 0 ID=cds-WP_000172747.1;Parent=gene-CCO56_RS12495;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=CCO56_RS12495;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 332334 332888 . + . ID=gene-CCO56_RS12500;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=CCO56_RS12500;old_locus_tag=CCO56_12500 NZ_NPMB01000005.1 Protein Homology CDS 332334 332888 . + 0 ID=cds-WP_000393522.1;Parent=gene-CCO56_RS12500;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=CCO56_RS12500;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 332885 333187 . + . ID=gene-CCO56_RS12505;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=CCO56_RS12505;old_locus_tag=CCO56_12505 NZ_NPMB01000005.1 Protein Homology CDS 332885 333187 . + 0 ID=cds-WP_000612687.1;Parent=gene-CCO56_RS12505;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=CCO56_RS12505;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 333184 335025 . + . ID=gene-CCO56_RS12510;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=CCO56_RS12510;old_locus_tag=CCO56_12510 NZ_NPMB01000005.1 Protein Homology CDS 333184 335025 . + 0 ID=cds-WP_001056582.1;Parent=gene-CCO56_RS12510;Dbxref=GenBank:WP_001056582.1;Name=WP_001056582.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=CCO56_RS12510;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056582.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 335102 336631 . + . ID=gene-CCO56_RS12515;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=CCO56_RS12515;old_locus_tag=CCO56_12515 NZ_NPMB01000005.1 Protein Homology CDS 335102 336631 . + 0 ID=cds-WP_000926430.1;Parent=gene-CCO56_RS12515;Dbxref=GenBank:WP_000926430.1;Name=WP_000926430.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=CCO56_RS12515;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926430.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 336638 338095 . + . ID=gene-CCO56_RS12520;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=CCO56_RS12520;old_locus_tag=CCO56_12520 NZ_NPMB01000005.1 Protein Homology CDS 336638 338095 . + 0 ID=cds-WP_000156669.1;Parent=gene-CCO56_RS12520;Dbxref=GenBank:WP_000156669.1;Name=WP_000156669.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=CCO56_RS12520;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156669.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 338236 339240 . - . ID=gene-CCO56_RS12525;Name=CCO56_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12525;old_locus_tag=CCO56_12525 NZ_NPMB01000005.1 Protein Homology CDS 338236 339240 . - 0 ID=cds-WP_000368564.1;Parent=gene-CCO56_RS12525;Dbxref=GenBank:WP_000368564.1;Name=WP_000368564.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131502.1;locus_tag=CCO56_RS12525;product=chemotaxis protein;protein_id=WP_000368564.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 339306 340223 . - . ID=gene-CCO56_RS12530;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=CCO56_RS12530;old_locus_tag=CCO56_12530 NZ_NPMB01000005.1 Protein Homology CDS 339306 340223 . - 0 ID=cds-WP_061377307.1;Parent=gene-CCO56_RS12530;Dbxref=GenBank:WP_061377307.1;Name=WP_061377307.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=CCO56_RS12530;product=ribonuclease BN;protein_id=WP_061377307.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 340284 340745 . + . ID=gene-CCO56_RS12535;Name=CCO56_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12535;old_locus_tag=CCO56_12535 NZ_NPMB01000005.1 Protein Homology CDS 340284 340745 . + 0 ID=cds-WP_000568156.1;Parent=gene-CCO56_RS12535;Dbxref=GenBank:WP_000568156.1;Name=WP_000568156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=CCO56_RS12535;product=GNAT family N-acetyltransferase;protein_id=WP_000568156.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 340800 341105 . + . ID=gene-CCO56_RS12540;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=CCO56_RS12540;old_locus_tag=CCO56_12540 NZ_NPMB01000005.1 Protein Homology CDS 340800 341105 . + 0 ID=cds-WP_001519663.1;Parent=gene-CCO56_RS12540;Dbxref=GenBank:WP_001519663.1;Name=WP_001519663.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=CCO56_RS12540;product=stress response protein ElaB;protein_id=WP_001519663.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 341207 342502 . + . ID=gene-CCO56_RS12545;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=CCO56_RS12545;old_locus_tag=CCO56_12545 NZ_NPMB01000005.1 Protein Homology CDS 341207 342502 . + 0 ID=cds-WP_000555675.1;Parent=gene-CCO56_RS12545;Dbxref=GenBank:WP_000555675.1;Name=WP_000555675.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406427.1;locus_tag=CCO56_RS12545;product=isochorismate synthase MenF;protein_id=WP_000555675.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 342588 344258 . + . ID=gene-CCO56_RS12550;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CCO56_RS12550;old_locus_tag=CCO56_12550 NZ_NPMB01000005.1 Protein Homology CDS 342588 344258 . + 0 ID=cds-WP_000116385.1;Parent=gene-CCO56_RS12550;Dbxref=GenBank:WP_000116385.1;Name=WP_000116385.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=CCO56_RS12550;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116385.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 344255 345013 . + . ID=gene-CCO56_RS12555;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CCO56_RS12555;old_locus_tag=CCO56_12555 NZ_NPMB01000005.1 Protein Homology CDS 344255 345013 . + 0 ID=cds-WP_080177196.1;Parent=gene-CCO56_RS12555;Dbxref=GenBank:WP_080177196.1;Name=WP_080177196.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=CCO56_RS12555;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_080177196.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 345028 345885 . + . ID=gene-CCO56_RS12560;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CCO56_RS12560;old_locus_tag=CCO56_12560 NZ_NPMB01000005.1 Protein Homology CDS 345028 345885 . + 0 ID=cds-WP_000640013.1;Parent=gene-CCO56_RS12560;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=CCO56_RS12560;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 345885 346847 . + . ID=gene-CCO56_RS12565;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CCO56_RS12565;old_locus_tag=CCO56_12565 NZ_NPMB01000005.1 Protein Homology CDS 345885 346847 . + 0 ID=cds-WP_001255556.1;Parent=gene-CCO56_RS12565;Dbxref=GenBank:WP_001255556.1;Name=WP_001255556.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=CCO56_RS12565;product=o-succinylbenzoate synthase;protein_id=WP_001255556.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 346844 348211 . + . ID=gene-CCO56_RS12570;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CCO56_RS12570;old_locus_tag=CCO56_12570 NZ_NPMB01000005.1 Protein Homology CDS 346844 348211 . + 0 ID=cds-WP_080177197.1;Parent=gene-CCO56_RS12570;Dbxref=GenBank:WP_080177197.1;Name=WP_080177197.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=CCO56_RS12570;product=o-succinylbenzoate--CoA ligase;protein_id=WP_080177197.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 348309 348566 . + . ID=gene-CCO56_RS12575;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=CCO56_RS12575;old_locus_tag=CCO56_12575 NZ_NPMB01000005.1 Protein Homology CDS 348309 348566 . + 0 ID=cds-WP_000455132.1;Parent=gene-CCO56_RS12575;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=CCO56_RS12575;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 348561 348938 . - . ID=gene-CCO56_RS12580;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=CCO56_RS12580;old_locus_tag=CCO56_12580 NZ_NPMB01000005.1 Protein Homology CDS 348561 348938 . - 0 ID=cds-WP_000538694.1;Parent=gene-CCO56_RS12580;Dbxref=GenBank:WP_000538694.1;Name=WP_000538694.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=CCO56_RS12580;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538694.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 348938 349273 . - . ID=gene-CCO56_RS12585;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=CCO56_RS12585;old_locus_tag=CCO56_12585 NZ_NPMB01000005.1 Protein Homology CDS 348938 349273 . - 0 ID=cds-WP_000580688.1;Parent=gene-CCO56_RS12585;Dbxref=GenBank:WP_000580688.1;Name=WP_000580688.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=CCO56_RS12585;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580688.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 349270 350916 . - . ID=gene-CCO56_RS12590;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=CCO56_RS12590;old_locus_tag=CCO56_12590 NZ_NPMB01000005.1 Protein Homology CDS 349270 350916 . - 0 ID=cds-WP_000978043.1;Parent=gene-CCO56_RS12590;Dbxref=GenBank:WP_000978043.1;Name=WP_000978043.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=CCO56_RS12590;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000978043.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 350913 351812 . - . ID=gene-CCO56_RS12595;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=CCO56_RS12595;old_locus_tag=CCO56_12595 NZ_NPMB01000005.1 Protein Homology CDS 350913 351812 . - 0 ID=cds-WP_000169775.1;Parent=gene-CCO56_RS12595;Dbxref=GenBank:WP_000169775.1;Name=WP_000169775.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=CCO56_RS12595;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169775.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 351809 353791 . - . ID=gene-CCO56_RS12600;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=CCO56_RS12600;old_locus_tag=CCO56_12600 NZ_NPMB01000005.1 Protein Homology CDS 351809 353791 . - 0 ID=cds-WP_000648777.1;Parent=gene-CCO56_RS12600;Dbxref=GenBank:WP_000648777.1;Name=WP_000648777.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=CCO56_RS12600;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000648777.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 353788 354771 . - . ID=gene-CCO56_RS12605;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=CCO56_RS12605;old_locus_tag=CCO56_12605 NZ_NPMB01000005.1 Protein Homology CDS 353788 354771 . - 0 ID=cds-WP_000458893.1;Parent=gene-CCO56_RS12605;Dbxref=GenBank:WP_000458893.1;Name=WP_000458893.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=CCO56_RS12605;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458893.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 354774 355913 . - . ID=gene-CCO56_RS12610;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=CCO56_RS12610;old_locus_tag=CCO56_12610 NZ_NPMB01000005.1 Protein Homology CDS 354774 355913 . - 0 ID=cds-WP_001279302.1;Parent=gene-CCO56_RS12610;Dbxref=GenBank:WP_001279302.1;Name=WP_001279302.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=CCO56_RS12610;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001279302.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 356212 356817 . + . ID=gene-CCO56_RS12615;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=CCO56_RS12615;old_locus_tag=CCO56_12615 NZ_NPMB01000005.1 Protein Homology CDS 356212 356817 . + 0 ID=cds-WP_000879260.1;Parent=gene-CCO56_RS12615;Dbxref=GenBank:WP_000879260.1;Name=WP_000879260.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=CCO56_RS12615;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879260.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 356863 357288 . - . ID=gene-CCO56_RS12620;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=CCO56_RS12620;old_locus_tag=CCO56_12620 NZ_NPMB01000005.1 Protein Homology CDS 356863 357288 . - 0 ID=cds-WP_001249896.1;Parent=gene-CCO56_RS12620;Dbxref=GenBank:WP_001249896.1;Name=WP_001249896.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=CCO56_RS12620;product=nucleoside triphosphatase NudI;protein_id=WP_001249896.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 357567 358109 . + . ID=gene-CCO56_RS12625;Name=CCO56_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12625;old_locus_tag=CCO56_12625 NZ_NPMB01000005.1 Protein Homology CDS 357567 358109 . + 0 ID=cds-WP_001562414.1;Parent=gene-CCO56_RS12625;Dbxref=GenBank:WP_001562414.1;Name=WP_001562414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=CCO56_RS12625;product=YfaZ family outer membrane protein;protein_id=WP_001562414.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 358224 359420 . + . ID=gene-CCO56_RS12630;Name=CCO56_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12630;old_locus_tag=CCO56_12630 NZ_NPMB01000005.1 Protein Homology CDS 358224 359420 . + 0 ID=cds-WP_080177284.1;Parent=gene-CCO56_RS12630;Dbxref=GenBank:WP_080177284.1;Name=WP_080177284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=CCO56_RS12630;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_080177284.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 359654 360676 . - . ID=gene-CCO56_RS12635;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=CCO56_RS12635;old_locus_tag=CCO56_12635 NZ_NPMB01000005.1 Protein Homology CDS 359654 360676 . - 0 ID=cds-WP_080177283.1;Parent=gene-CCO56_RS12635;Dbxref=GenBank:WP_080177283.1;Name=WP_080177283.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017721.1;locus_tag=CCO56_RS12635;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_080177283.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 361102 362292 . - . ID=gene-CCO56_RS12645;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=CCO56_RS12645;old_locus_tag=CCO56_12645 NZ_NPMB01000005.1 Protein Homology CDS 361102 362292 . - 0 ID=cds-WP_001285724.1;Parent=gene-CCO56_RS12645;Dbxref=GenBank:WP_001285724.1;Name=WP_001285724.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=CCO56_RS12645;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285724.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 362289 363548 . - . ID=gene-CCO56_RS12650;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=CCO56_RS12650;old_locus_tag=CCO56_12650 NZ_NPMB01000005.1 Protein Homology CDS 362289 363548 . - 0 ID=cds-WP_000667156.1;Parent=gene-CCO56_RS12650;Dbxref=GenBank:WP_000667156.1;Name=WP_000667156.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=CCO56_RS12650;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667156.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 363538 365166 . - . ID=gene-CCO56_RS12655;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=CCO56_RS12655;old_locus_tag=CCO56_12655 NZ_NPMB01000005.1 Protein Homology CDS 363538 365166 . - 0 ID=cds-WP_023259960.1;Parent=gene-CCO56_RS12655;Dbxref=GenBank:WP_023259960.1;Name=WP_023259960.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=CCO56_RS12655;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_023259960.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 365439 366797 . + . ID=gene-CCO56_RS12660;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CCO56_RS12660;old_locus_tag=CCO56_12660 NZ_NPMB01000005.1 Protein Homology CDS 365439 366797 . + 0 ID=cds-WP_000948739.1;Parent=gene-CCO56_RS12660;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=CCO56_RS12660;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 366802 367872 . + . ID=gene-CCO56_RS12665;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=CCO56_RS12665;old_locus_tag=CCO56_12665 NZ_NPMB01000005.1 Protein Homology CDS 366802 367872 . + 0 ID=cds-WP_000858943.1;Parent=gene-CCO56_RS12665;Dbxref=GenBank:WP_000858943.1;Name=WP_000858943.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=CCO56_RS12665;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858943.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 367988 368866 . - . ID=gene-CCO56_RS12670;Name=CCO56_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12670;old_locus_tag=CCO56_12670 NZ_NPMB01000005.1 Protein Homology CDS 367988 368866 . - 0 ID=cds-WP_000176719.1;Parent=gene-CCO56_RS12670;Dbxref=GenBank:WP_000176719.1;Name=WP_000176719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=CCO56_RS12670;product=LysR family transcriptional regulator;protein_id=WP_000176719.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 369028 370218 . + . ID=gene-CCO56_RS12675;Name=CCO56_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12675;old_locus_tag=CCO56_12675 NZ_NPMB01000005.1 Protein Homology CDS 369028 370218 . + 0 ID=cds-WP_000660247.1;Parent=gene-CCO56_RS12675;Dbxref=GenBank:WP_000660247.1;Name=WP_000660247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=CCO56_RS12675;product=MFS transporter;protein_id=WP_000660247.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 370220 370474 . - . ID=gene-CCO56_RS12680;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=CCO56_RS12680;old_locus_tag=CCO56_12680 NZ_NPMB01000005.1 Protein Homology CDS 370220 370474 . - 0 ID=cds-WP_000533921.1;Parent=gene-CCO56_RS12680;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=CCO56_RS12680;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 370474 371604 . - . ID=gene-CCO56_RS12685;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=CCO56_RS12685;old_locus_tag=CCO56_12685 NZ_NPMB01000005.1 Protein Homology CDS 370474 371604 . - 0 ID=cds-WP_080177282.1;Parent=gene-CCO56_RS12685;Dbxref=GenBank:WP_080177282.1;Name=WP_080177282.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=CCO56_RS12685;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_080177282.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 371717 374002 . - . ID=gene-CCO56_RS12690;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=CCO56_RS12690;old_locus_tag=CCO56_12690 NZ_NPMB01000005.1 Protein Homology CDS 371717 374002 . - 0 ID=cds-WP_001076494.1;Parent=gene-CCO56_RS12690;Dbxref=GenBank:WP_001076494.1;Name=WP_001076494.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=CCO56_RS12690;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076494.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 374359 375087 . - . ID=gene-CCO56_RS12695;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=CCO56_RS12695;old_locus_tag=CCO56_12695 NZ_NPMB01000005.1 Protein Homology CDS 374359 375087 . - 0 ID=cds-WP_001091009.1;Parent=gene-CCO56_RS12695;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=CCO56_RS12695;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 375170 376054 . - . ID=gene-CCO56_RS12700;Name=CCO56_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12700;old_locus_tag=CCO56_12700 NZ_NPMB01000005.1 Protein Homology CDS 375170 376054 . - 0 ID=cds-WP_080177280.1;Parent=gene-CCO56_RS12700;Dbxref=GenBank:WP_080177280.1;Name=WP_080177280.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=CCO56_RS12700;product=GntR family transcriptional regulator;protein_id=WP_080177280.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 376104 377429 . + . ID=gene-CCO56_RS12705;Name=CCO56_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12705;old_locus_tag=CCO56_12705 NZ_NPMB01000005.1 Protein Homology CDS 376104 377429 . + 0 ID=cds-WP_080177279.1;Parent=gene-CCO56_RS12705;Dbxref=GenBank:WP_080177279.1;Name=WP_080177279.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=CCO56_RS12705;product=MFS transporter;protein_id=WP_080177279.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 377444 378646 . + . ID=gene-CCO56_RS12710;Name=CCO56_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12710;old_locus_tag=CCO56_12710 NZ_NPMB01000005.1 Protein Homology CDS 377444 378646 . + 0 ID=cds-WP_023207571.1;Parent=gene-CCO56_RS12710;Dbxref=GenBank:WP_023207571.1;Name=WP_023207571.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=CCO56_RS12710;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_023207571.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 379056 381692 . + . ID=gene-CCO56_RS12720;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CCO56_RS12720;old_locus_tag=CCO56_12720 NZ_NPMB01000005.1 Protein Homology CDS 379056 381692 . + 0 ID=cds-WP_001281271.1;Parent=gene-CCO56_RS12720;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=CCO56_RS12720;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 381810 384656 . + . ID=gene-CCO56_RS12725;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=CCO56_RS12725;old_locus_tag=CCO56_12725 NZ_NPMB01000005.1 Protein Homology CDS 381810 384656 . + 0 ID=cds-WP_000876070.1;Parent=gene-CCO56_RS12725;Dbxref=GenBank:WP_000876070.1;Name=WP_000876070.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=CCO56_RS12725;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876070.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 384760 385410 . - . ID=gene-CCO56_RS12730;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=CCO56_RS12730;old_locus_tag=CCO56_12730 NZ_NPMB01000005.1 Protein Homology CDS 384760 385410 . - 0 ID=cds-WP_001061919.1;Parent=gene-CCO56_RS12730;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=CCO56_RS12730;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 385427 388096 . - . ID=gene-CCO56_RS12735;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=CCO56_RS12735;old_locus_tag=CCO56_12735 NZ_NPMB01000005.1 Protein Homology CDS 385427 388096 . - 0 ID=cds-WP_000083205.1;Parent=gene-CCO56_RS12735;Dbxref=GenBank:WP_000083205.1;Name=WP_000083205.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=CCO56_RS12735;product=phosphotransferase RcsD;protein_id=WP_000083205.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 388824 389960 . + . ID=gene-CCO56_RS12745;Name=CCO56_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12745;old_locus_tag=CCO56_12745 NZ_NPMB01000005.1 Protein Homology CDS 388824 389960 . + 0 ID=cds-WP_000865520.1;Parent=gene-CCO56_RS12745;Dbxref=GenBank:WP_000865520.1;Name=WP_000865520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=CCO56_RS12745;product=porin OmpC;protein_id=WP_000865520.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 390075 391127 . + . ID=gene-CCO56_RS12750;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=CCO56_RS12750;old_locus_tag=CCO56_12750 NZ_NPMB01000005.1 Protein Homology CDS 390075 391127 . + 0 ID=cds-WP_000784299.1;Parent=gene-CCO56_RS12750;Dbxref=GenBank:WP_000784299.1;Name=WP_000784299.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=CCO56_RS12750;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784299.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 391208 392269 . + . ID=gene-CCO56_RS12755;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=CCO56_RS12755;old_locus_tag=CCO56_12755 NZ_NPMB01000005.1 Protein Homology CDS 391208 392269 . + 0 ID=cds-WP_000975970.1;Parent=gene-CCO56_RS12755;Dbxref=GenBank:WP_000975970.1;Name=WP_000975970.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=CCO56_RS12755;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975970.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 392272 392922 . + . ID=gene-CCO56_RS12760;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=CCO56_RS12760;old_locus_tag=CCO56_12760 NZ_NPMB01000005.1 Protein Homology CDS 392272 392922 . + 0 ID=cds-WP_000884989.1;Parent=gene-CCO56_RS12760;Dbxref=GenBank:WP_000884989.1;Name=WP_000884989.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=CCO56_RS12760;product=DNA oxidative demethylase AlkB;protein_id=WP_000884989.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 392998 394641 . + . ID=gene-CCO56_RS12765;Name=CCO56_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12765;old_locus_tag=CCO56_12765 NZ_NPMB01000005.1 Protein Homology CDS 392998 394641 . + 0 ID=cds-WP_079846297.1;Parent=gene-CCO56_RS12765;Dbxref=GenBank:WP_079846297.1;Name=WP_079846297.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=CCO56_RS12765;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_079846297.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 394833 395327 . - . ID=gene-CCO56_RS12770;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=CCO56_RS12770;old_locus_tag=CCO56_12770 NZ_NPMB01000005.1 Protein Homology CDS 394833 395327 . - 0 ID=cds-WP_001550295.1;Parent=gene-CCO56_RS12770;Dbxref=GenBank:WP_001550295.1;Name=WP_001550295.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=CCO56_RS12770;product=serine protease inhibitor ecotin;protein_id=WP_001550295.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 395741 396232 . + . ID=gene-CCO56_RS12775;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=CCO56_RS12775;old_locus_tag=CCO56_12775 NZ_NPMB01000005.1 Protein Homology CDS 395741 396232 . + 0 ID=cds-WP_000228062.1;Parent=gene-CCO56_RS12775;Dbxref=GenBank:WP_000228062.1;Name=WP_000228062.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=CCO56_RS12775;product=ferredoxin-type protein NapF;protein_id=WP_000228062.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 396222 396485 . + . ID=gene-CCO56_RS12780;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=CCO56_RS12780;old_locus_tag=CCO56_12780 NZ_NPMB01000005.1 Protein Homology CDS 396222 396485 . + 0 ID=cds-WP_001260056.1;Parent=gene-CCO56_RS12780;Dbxref=GenBank:WP_001260056.1;Name=WP_001260056.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=CCO56_RS12780;product=chaperone NapD;protein_id=WP_001260056.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 396482 398968 . + . ID=gene-CCO56_RS12785;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=CCO56_RS12785;old_locus_tag=CCO56_12785 NZ_NPMB01000005.1 Protein Homology CDS 396482 398968 . + 0 ID=cds-WP_000778097.1;Parent=gene-CCO56_RS12785;Dbxref=GenBank:WP_000778097.1;Name=WP_000778097.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=CCO56_RS12785;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778097.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 398975 399670 . + . ID=gene-CCO56_RS12790;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=CCO56_RS12790;old_locus_tag=CCO56_12790 NZ_NPMB01000005.1 Protein Homology CDS 398975 399670 . + 0 ID=cds-WP_080177278.1;Parent=gene-CCO56_RS12790;Dbxref=GenBank:WP_080177278.1;Name=WP_080177278.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=CCO56_RS12790;product=ferredoxin-type protein NapG;protein_id=WP_080177278.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 399657 400526 . + . ID=gene-CCO56_RS12795;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=CCO56_RS12795;old_locus_tag=CCO56_12795 NZ_NPMB01000005.1 Protein Homology CDS 399657 400526 . + 0 ID=cds-WP_000013532.1;Parent=gene-CCO56_RS12795;Dbxref=GenBank:WP_000013532.1;Name=WP_000013532.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=CCO56_RS12795;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013532.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 400642 401091 . + . ID=gene-CCO56_RS12805;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=CCO56_RS12805;old_locus_tag=CCO56_12800 NZ_NPMB01000005.1 Protein Homology CDS 400642 401091 . + 0 ID=cds-WP_000835182.1;Parent=gene-CCO56_RS12805;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=CCO56_RS12805;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 401101 401703 . + . ID=gene-CCO56_RS12810;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=CCO56_RS12810;old_locus_tag=CCO56_12805 NZ_NPMB01000005.1 Protein Homology CDS 401101 401703 . + 0 ID=cds-WP_023214980.1;Parent=gene-CCO56_RS12810;Dbxref=GenBank:WP_023214980.1;Name=WP_023214980.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=CCO56_RS12810;product=cytochrome c-type protein NapC;protein_id=WP_023214980.1;transl_table=11 NZ_NPMB01000005.1 RefSeq gene 401724 401850 . + . ID=gene-CCO56_RS12815;Name=CCO56_RS12815;end_range=401850,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12815;old_locus_tag=CCO56_12810;partial=true NZ_NPMB01000005.1 Protein Homology CDS 401724 401850 . + 0 ID=cds-WP_116799501.1-2;Parent=gene-CCO56_RS12815;Dbxref=GenBank:WP_116799501.1;Name=WP_116799501.1;Ontology_term=GO:0005524;end_range=401850,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO56_RS12815;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_116799501.1;transl_table=11 ##sequence-region NZ_NPMB01000006.1 1 388120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000006.1 RefSeq region 1 388120 . + . ID=NZ_NPMB01000006.1:1..388120;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000006.1 RefSeq gene 1 286 . - . ID=gene-CCO56_RS12820;Name=CCO56_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12820;old_locus_tag=CCO56_12815;partial=true;start_range=.,1 NZ_NPMB01000006.1 Protein Homology CDS 1 286 . - 0 ID=cds-WP_000031682.1-2;Parent=gene-CCO56_RS12820;Dbxref=GenBank:WP_000031682.1;Name=WP_000031682.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=CCO56_RS12820;partial=true;product=GTP-binding protein;protein_id=WP_000031682.1;start_range=.,1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 358 2472 . - . ID=gene-CCO56_RS12825;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CCO56_RS12825;old_locus_tag=CCO56_12820 NZ_NPMB01000006.1 Protein Homology CDS 358 2472 . - 0 ID=cds-WP_000124693.1;Parent=gene-CCO56_RS12825;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=CCO56_RS12825;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 2569 3039 . - . ID=gene-CCO56_RS12830;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CCO56_RS12830;old_locus_tag=CCO56_12825 NZ_NPMB01000006.1 Protein Homology CDS 2569 3039 . - 0 ID=cds-WP_001138042.1;Parent=gene-CCO56_RS12830;Dbxref=GenBank:WP_001138042.1;Name=WP_001138042.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=CCO56_RS12830;product=30S ribosomal protein S7;protein_id=WP_001138042.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 3135 3509 . - . ID=gene-CCO56_RS12835;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CCO56_RS12835;old_locus_tag=CCO56_12830 NZ_NPMB01000006.1 Protein Homology CDS 3135 3509 . - 0 ID=cds-WP_000246815.1;Parent=gene-CCO56_RS12835;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=CCO56_RS12835;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 3635 3922 . - . ID=gene-CCO56_RS12840;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=CCO56_RS12840;old_locus_tag=CCO56_12835 NZ_NPMB01000006.1 Protein Homology CDS 3635 3922 . - 0 ID=cds-WP_000903398.1;Parent=gene-CCO56_RS12840;Dbxref=GenBank:WP_000903398.1;Name=WP_000903398.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=CCO56_RS12840;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903398.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 3930 4286 . - . ID=gene-CCO56_RS12845;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=CCO56_RS12845;old_locus_tag=CCO56_12840 NZ_NPMB01000006.1 Protein Homology CDS 3930 4286 . - 0 ID=cds-WP_000820705.1;Parent=gene-CCO56_RS12845;Dbxref=GenBank:WP_000820705.1;Name=WP_000820705.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=CCO56_RS12845;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820705.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 4286 4672 . - . ID=gene-CCO56_RS12850;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=CCO56_RS12850;old_locus_tag=CCO56_12845 NZ_NPMB01000006.1 Protein Homology CDS 4286 4672 . - 0 ID=cds-WP_001268011.1;Parent=gene-CCO56_RS12850;Dbxref=GenBank:WP_001268011.1;Name=WP_001268011.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=CCO56_RS12850;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268011.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 4672 5394 . - . ID=gene-CCO56_RS12855;Name=CCO56_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12855;old_locus_tag=CCO56_12850 NZ_NPMB01000006.1 Protein Homology CDS 4672 5394 . - 0 ID=cds-WP_000091471.1;Parent=gene-CCO56_RS12855;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=CCO56_RS12855;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 5671 6489 . - . ID=gene-CCO56_RS12860;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=CCO56_RS12860;old_locus_tag=CCO56_12855 NZ_NPMB01000006.1 Protein Homology CDS 5671 6489 . - 0 ID=cds-WP_000838225.1;Parent=gene-CCO56_RS12860;Dbxref=GenBank:WP_000838225.1;Name=WP_000838225.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=CCO56_RS12860;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838225.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 6709 6927 . + . ID=gene-CCO56_RS12865;Name=CCO56_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12865;old_locus_tag=CCO56_12860 NZ_NPMB01000006.1 Protein Homology CDS 6709 6927 . + 0 ID=cds-WP_001152701.1;Parent=gene-CCO56_RS12865;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=CCO56_RS12865;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 7115 7705 . - . ID=gene-CCO56_RS12870;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=CCO56_RS12870;old_locus_tag=CCO56_12865 NZ_NPMB01000006.1 Protein Homology CDS 7115 7705 . - 0 ID=cds-WP_000861341.1;Parent=gene-CCO56_RS12870;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=CCO56_RS12870;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 7800 8000 . - . ID=gene-CCO56_RS12875;Name=CCO56_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12875;old_locus_tag=CCO56_12870 NZ_NPMB01000006.1 Protein Homology CDS 7800 8000 . - 0 ID=cds-WP_001007735.1;Parent=gene-CCO56_RS12875;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=CCO56_RS12875;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 8010 9815 . - . ID=gene-CCO56_RS12880;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=CCO56_RS12880;old_locus_tag=CCO56_12875 NZ_NPMB01000006.1 Protein Homology CDS 8010 9815 . - 0 ID=cds-WP_000398133.1;Parent=gene-CCO56_RS12880;Dbxref=GenBank:WP_000398133.1;Name=WP_000398133.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=CCO56_RS12880;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000398133.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 9815 10366 . - . ID=gene-CCO56_RS12885;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=CCO56_RS12885;old_locus_tag=CCO56_12880 NZ_NPMB01000006.1 Protein Homology CDS 9815 10366 . - 0 ID=cds-WP_023219798.1;Parent=gene-CCO56_RS12885;Dbxref=GenBank:WP_023219798.1;Name=WP_023219798.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=CCO56_RS12885;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_023219798.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 10632 12539 . + . ID=gene-CCO56_RS12890;Name=CCO56_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12890;old_locus_tag=CCO56_12885 NZ_NPMB01000006.1 Protein Homology CDS 10632 12539 . + 0 ID=cds-WP_001633524.1;Parent=gene-CCO56_RS12890;Dbxref=GenBank:WP_001633524.1;Name=WP_001633524.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=CCO56_RS12890;product=ABC transporter ATP-binding protein;protein_id=WP_001633524.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 12555 12776 . + . ID=gene-CCO56_RS12895;Name=CCO56_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12895;old_locus_tag=CCO56_12890 NZ_NPMB01000006.1 Protein Homology CDS 12555 12776 . + 0 ID=cds-WP_052942619.1;Parent=gene-CCO56_RS12895;Dbxref=GenBank:WP_052942619.1;Name=WP_052942619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=CCO56_RS12895;product=LysR family transcriptional regulator;protein_id=WP_052942619.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 12778 13089 . - . ID=gene-CCO56_RS12900;Name=CCO56_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12900;old_locus_tag=CCO56_12895 NZ_NPMB01000006.1 Protein Homology CDS 12778 13089 . - 0 ID=cds-WP_000047690.1;Parent=gene-CCO56_RS12900;Dbxref=GenBank:WP_000047690.1;Name=WP_000047690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=CCO56_RS12900;product=monooxygenase;protein_id=WP_000047690.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 13287 14354 . + . ID=gene-CCO56_RS12905;Name=CCO56_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12905;old_locus_tag=CCO56_12900 NZ_NPMB01000006.1 Protein Homology CDS 13287 14354 . + 0 ID=cds-WP_017442187.1;Parent=gene-CCO56_RS12905;Dbxref=GenBank:WP_017442187.1;Name=WP_017442187.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=CCO56_RS12905;product=hydrolase;protein_id=WP_017442187.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 14351 14569 . + . ID=gene-CCO56_RS12910;Name=CCO56_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12910;old_locus_tag=CCO56_12905 NZ_NPMB01000006.1 Protein Homology CDS 14351 14569 . + 0 ID=cds-WP_000586568.1;Parent=gene-CCO56_RS12910;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=CCO56_RS12910;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 14621 15490 . + . ID=gene-CCO56_RS12915;Name=CCO56_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12915;old_locus_tag=CCO56_12910 NZ_NPMB01000006.1 Protein Homology CDS 14621 15490 . + 0 ID=cds-WP_001274690.1;Parent=gene-CCO56_RS12915;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=CCO56_RS12915;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 15586 15990 . - . ID=gene-CCO56_RS12920;Name=CCO56_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12920;old_locus_tag=CCO56_12915 NZ_NPMB01000006.1 Protein Homology CDS 15586 15990 . - 0 ID=cds-WP_001148919.1;Parent=gene-CCO56_RS12920;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=CCO56_RS12920;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 16298 16930 . + . ID=gene-CCO56_RS12925;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=CCO56_RS12925;old_locus_tag=CCO56_12920 NZ_NPMB01000006.1 Protein Homology CDS 16298 16930 . + 0 ID=cds-WP_000242758.1;Parent=gene-CCO56_RS12925;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=CCO56_RS12925;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 16979 19066 . + . ID=gene-CCO56_RS12930;Name=CCO56_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12930;old_locus_tag=CCO56_12925 NZ_NPMB01000006.1 Protein Homology CDS 16979 19066 . + 0 ID=cds-WP_000269311.1;Parent=gene-CCO56_RS12930;Dbxref=GenBank:WP_000269311.1;Name=WP_000269311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=CCO56_RS12930;product=YccS/YhfK family putative transporter;protein_id=WP_000269311.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 19109 20326 . - . ID=gene-CCO56_RS12935;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=CCO56_RS12935;old_locus_tag=CCO56_12930 NZ_NPMB01000006.1 Protein Homology CDS 19109 20326 . - 0 ID=cds-WP_023215161.1;Parent=gene-CCO56_RS12935;Dbxref=GenBank:WP_023215161.1;Name=WP_023215161.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=CCO56_RS12935;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_023215161.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 20412 20975 . - . ID=gene-CCO56_RS12940;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=CCO56_RS12940;old_locus_tag=CCO56_12935 NZ_NPMB01000006.1 Protein Homology CDS 20412 20975 . - 0 ID=cds-WP_000601879.1;Parent=gene-CCO56_RS12940;Dbxref=GenBank:WP_000601879.1;Name=WP_000601879.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=CCO56_RS12940;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601879.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 21007 21609 . - . ID=gene-CCO56_RS12945;Name=CCO56_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12945;old_locus_tag=CCO56_12940 NZ_NPMB01000006.1 Protein Homology CDS 21007 21609 . - 0 ID=cds-WP_001528278.1;Parent=gene-CCO56_RS12945;Dbxref=GenBank:WP_001528278.1;Name=WP_001528278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=CCO56_RS12945;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001528278.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 21599 21766 . - . ID=gene-CCO56_RS12950;Name=CCO56_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12950;old_locus_tag=CCO56_12945 NZ_NPMB01000006.1 Protein Homology CDS 21599 21766 . - 0 ID=cds-WP_001519136.1;Parent=gene-CCO56_RS12950;Dbxref=GenBank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=CCO56_RS12950;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 21880 22452 . - . ID=gene-CCO56_RS12955;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=CCO56_RS12955;old_locus_tag=CCO56_12950 NZ_NPMB01000006.1 Protein Homology CDS 21880 22452 . - 0 ID=cds-WP_000920478.1;Parent=gene-CCO56_RS12955;Dbxref=GenBank:WP_000920478.1;Name=WP_000920478.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=CCO56_RS12955;product=peptidylprolyl isomerase A;protein_id=WP_000920478.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 22729 23910 . + . ID=gene-CCO56_RS12960;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=CCO56_RS12960;old_locus_tag=CCO56_12955 NZ_NPMB01000006.1 Protein Homology CDS 22729 23910 . + 0 ID=cds-WP_000185267.1;Parent=gene-CCO56_RS12960;Dbxref=GenBank:WP_000185267.1;Name=WP_000185267.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=CCO56_RS12960;product=MFS transporter TsgA;protein_id=WP_000185267.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 24228 26771 . + . ID=gene-CCO56_RS12965;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CCO56_RS12965;old_locus_tag=CCO56_12960 NZ_NPMB01000006.1 Protein Homology CDS 24228 26771 . + 0 ID=cds-WP_080177218.1;Parent=gene-CCO56_RS12965;Dbxref=GenBank:WP_080177218.1;Name=WP_080177218.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=CCO56_RS12965;product=NADPH-nitrite reductase large subunit;protein_id=WP_080177218.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 26768 27094 . + . ID=gene-CCO56_RS12970;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CCO56_RS12970;old_locus_tag=CCO56_12965 NZ_NPMB01000006.1 Protein Homology CDS 26768 27094 . + 0 ID=cds-WP_000084819.1;Parent=gene-CCO56_RS12970;Dbxref=GenBank:WP_000084819.1;Name=WP_000084819.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=CCO56_RS12970;product=nitrite reductase small subunit NirD;protein_id=WP_000084819.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 27289 28098 . + . ID=gene-CCO56_RS12975;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=CCO56_RS12975;old_locus_tag=CCO56_12970 NZ_NPMB01000006.1 Protein Homology CDS 27289 28098 . + 0 ID=cds-WP_000493571.1;Parent=gene-CCO56_RS12975;Dbxref=GenBank:WP_000493571.1;Name=WP_000493571.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=CCO56_RS12975;product=nitrite transporter NirC;protein_id=WP_000493571.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 28110 29483 . + . ID=gene-CCO56_RS12980;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=CCO56_RS12980;old_locus_tag=CCO56_12975 NZ_NPMB01000006.1 Protein Homology CDS 28110 29483 . + 0 ID=cds-WP_000349904.1;Parent=gene-CCO56_RS12980;Dbxref=GenBank:WP_000349904.1;Name=WP_000349904.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=CCO56_RS12980;product=siroheme synthase CysG;protein_id=WP_000349904.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 29812 35610 . + . ID=gene-CCO56_RS12985;Name=CCO56_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12985;old_locus_tag=CCO56_12980 NZ_NPMB01000006.1 Protein Homology CDS 29812 35610 . + 0 ID=cds-WP_409574349.1;Parent=gene-CCO56_RS12985;Dbxref=GenBank:WP_409574349.1;Name=WP_409574349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663097.1;locus_tag=CCO56_RS12985;product=autotransporter adhesin BigA;protein_id=WP_409574349.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 35804 35974 . + . ID=gene-CCO56_RS12990;Name=CCO56_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS12990;old_locus_tag=CCO56_12985 NZ_NPMB01000006.1 Protein Homology CDS 35804 35974 . + 0 ID=cds-WP_000472323.1;Parent=gene-CCO56_RS12990;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=CCO56_RS12990;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 36119 37123 . - . ID=gene-CCO56_RS12995;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO56_RS12995;old_locus_tag=CCO56_12990 NZ_NPMB01000006.1 Protein Homology CDS 36119 37123 . - 0 ID=cds-WP_000165562.1;Parent=gene-CCO56_RS12995;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=CCO56_RS12995;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 37116 37874 . - . ID=gene-CCO56_RS13000;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=CCO56_RS13000;old_locus_tag=CCO56_12995 NZ_NPMB01000006.1 Protein Homology CDS 37116 37874 . - 0 ID=cds-WP_000359652.1;Parent=gene-CCO56_RS13000;Dbxref=GenBank:WP_000359652.1;Name=WP_000359652.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=CCO56_RS13000;product=phosphoglycolate phosphatase;protein_id=WP_000359652.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 37867 38544 . - . ID=gene-CCO56_RS13005;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CCO56_RS13005;old_locus_tag=CCO56_13000 NZ_NPMB01000006.1 Protein Homology CDS 37867 38544 . - 0 ID=cds-WP_000816283.1;Parent=gene-CCO56_RS13005;Dbxref=GenBank:WP_000816283.1;Name=WP_000816283.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=CCO56_RS13005;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816283.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 38562 39398 . - . ID=gene-CCO56_RS13010;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=CCO56_RS13010;old_locus_tag=CCO56_13005 NZ_NPMB01000006.1 Protein Homology CDS 38562 39398 . - 0 ID=cds-WP_000742132.1;Parent=gene-CCO56_RS13010;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=CCO56_RS13010;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 39579 40856 . - . ID=gene-CCO56_RS13015;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=CCO56_RS13015;old_locus_tag=CCO56_13010 NZ_NPMB01000006.1 Protein Homology CDS 39579 40856 . - 0 ID=cds-WP_000343142.1;Parent=gene-CCO56_RS13015;Dbxref=GenBank:WP_000343142.1;Name=WP_000343142.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=CCO56_RS13015;product=cell division protein DamX;protein_id=WP_000343142.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 40954 42042 . - . ID=gene-CCO56_RS13020;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CCO56_RS13020;old_locus_tag=CCO56_13015 NZ_NPMB01000006.1 Protein Homology CDS 40954 42042 . - 0 ID=cds-WP_000439821.1;Parent=gene-CCO56_RS13020;Dbxref=GenBank:WP_000439821.1;Name=WP_000439821.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=CCO56_RS13020;product=3-dehydroquinate synthase;protein_id=WP_000439821.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 42099 42620 . - . ID=gene-CCO56_RS13025;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=CCO56_RS13025;old_locus_tag=CCO56_13020 NZ_NPMB01000006.1 Protein Homology CDS 42099 42620 . - 0 ID=cds-WP_000818621.1;Parent=gene-CCO56_RS13025;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=CCO56_RS13025;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 43085 44323 . - . ID=gene-CCO56_RS13040;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=CCO56_RS13040;old_locus_tag=CCO56_13035 NZ_NPMB01000006.1 Protein Homology CDS 43085 44323 . - 0 ID=cds-WP_080176943.1;Parent=gene-CCO56_RS13040;Dbxref=GenBank:WP_080176943.1;Name=WP_080176943.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=CCO56_RS13040;product=DNA uptake porin HofQ;protein_id=WP_080176943.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 44238 44639 . - . ID=gene-CCO56_RS13045;Name=CCO56_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13045;old_locus_tag=CCO56_13040 NZ_NPMB01000006.1 Protein Homology CDS 44238 44639 . - 0 ID=cds-WP_023208276.1;Parent=gene-CCO56_RS13045;Dbxref=GenBank:WP_023208276.1;Name=WP_023208276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=CCO56_RS13045;product=HofP DNA utilization family protein;protein_id=WP_023208276.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 44629 45102 . - . ID=gene-CCO56_RS13050;Name=CCO56_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13050;old_locus_tag=CCO56_13045 NZ_NPMB01000006.1 Protein Homology CDS 44629 45102 . - 0 ID=cds-WP_023208275.1;Parent=gene-CCO56_RS13050;Dbxref=GenBank:WP_023208275.1;Name=WP_023208275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=CCO56_RS13050;product=hypothetical protein;protein_id=WP_023208275.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 45086 45625 . - . ID=gene-CCO56_RS13055;Name=CCO56_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13055;old_locus_tag=CCO56_13050 NZ_NPMB01000006.1 Protein Homology CDS 45086 45625 . - 0 ID=cds-WP_000951387.1;Parent=gene-CCO56_RS13055;Dbxref=GenBank:WP_000951387.1;Name=WP_000951387.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=CCO56_RS13055;product=PilN domain-containing protein;protein_id=WP_000951387.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 45625 46404 . - . ID=gene-CCO56_RS13060;Name=CCO56_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13060;old_locus_tag=CCO56_13055 NZ_NPMB01000006.1 Protein Homology CDS 45625 46404 . - 0 ID=cds-WP_080176942.1;Parent=gene-CCO56_RS13060;Dbxref=GenBank:WP_080176942.1;Name=WP_080176942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=CCO56_RS13060;product=DNA utilization protein HofM;protein_id=WP_080176942.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 46525 49077 . + . ID=gene-CCO56_RS13065;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=CCO56_RS13065;old_locus_tag=CCO56_13060 NZ_NPMB01000006.1 Protein Homology CDS 46525 49077 . + 0 ID=cds-WP_000673818.1;Parent=gene-CCO56_RS13065;Dbxref=GenBank:WP_000673818.1;Name=WP_000673818.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=CCO56_RS13065;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_000673818.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 49173 49736 . - . ID=gene-CCO56_RS13070;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=CCO56_RS13070;old_locus_tag=CCO56_13065 NZ_NPMB01000006.1 Protein Homology CDS 49173 49736 . - 0 ID=cds-WP_000045725.1;Parent=gene-CCO56_RS13070;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=CCO56_RS13070;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 50059 52191 . + . ID=gene-CCO56_RS13075;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=CCO56_RS13075;old_locus_tag=CCO56_13070 NZ_NPMB01000006.1 Protein Homology CDS 50059 52191 . + 0 ID=cds-WP_000104092.1;Parent=gene-CCO56_RS13075;Dbxref=GenBank:WP_000104092.1;Name=WP_000104092.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=CCO56_RS13075;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104092.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 52256 52924 . + . ID=gene-CCO56_RS13080;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=CCO56_RS13080;old_locus_tag=CCO56_13075 NZ_NPMB01000006.1 Protein Homology CDS 52256 52924 . + 0 ID=cds-WP_001520508.1;Parent=gene-CCO56_RS13080;Dbxref=GenBank:WP_001520508.1;Name=WP_001520508.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=CCO56_RS13080;product=GMP/IMP nucleotidase;protein_id=WP_001520508.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 52935 53336 . + . ID=gene-CCO56_RS13085;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=CCO56_RS13085;old_locus_tag=CCO56_13080 NZ_NPMB01000006.1 Protein Homology CDS 52935 53336 . + 0 ID=cds-WP_000660718.1;Parent=gene-CCO56_RS13085;Dbxref=GenBank:WP_000660718.1;Name=WP_000660718.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=CCO56_RS13085;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660718.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 53361 54239 . + . ID=gene-CCO56_RS13090;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CCO56_RS13090;old_locus_tag=CCO56_13085 NZ_NPMB01000006.1 Protein Homology CDS 53361 54239 . + 0 ID=cds-WP_023257934.1;Parent=gene-CCO56_RS13090;Dbxref=GenBank:WP_023257934.1;Name=WP_023257934.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=CCO56_RS13090;product=Hsp33 family molecular chaperone HslO;protein_id=WP_023257934.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 54350 56059 . - . ID=gene-CCO56_RS13095;Name=CCO56_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13095;old_locus_tag=CCO56_13090 NZ_NPMB01000006.1 Protein Homology CDS 54350 56059 . - 0 ID=cds-WP_080176941.1;Parent=gene-CCO56_RS13095;Dbxref=GenBank:WP_080176941.1;Name=WP_080176941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=CCO56_RS13095;product=DUF4153 domain-containing protein;protein_id=WP_080176941.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 56439 58058 . + . ID=gene-CCO56_RS13100;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CCO56_RS13100;old_locus_tag=CCO56_13095 NZ_NPMB01000006.1 Protein Homology CDS 56439 58058 . + 0 ID=cds-WP_001265685.1;Parent=gene-CCO56_RS13100;Dbxref=GenBank:WP_001265685.1;Name=WP_001265685.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=CCO56_RS13100;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265685.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 58133 59485 . - . ID=gene-CCO56_RS13105;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=CCO56_RS13105;old_locus_tag=CCO56_13100 NZ_NPMB01000006.1 Protein Homology CDS 58133 59485 . - 0 ID=cds-WP_001253818.1;Parent=gene-CCO56_RS13105;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=CCO56_RS13105;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 59482 60201 . - . ID=gene-CCO56_RS13110;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=CCO56_RS13110;old_locus_tag=CCO56_13105 NZ_NPMB01000006.1 Protein Homology CDS 59482 60201 . - 0 ID=cds-WP_001157751.1;Parent=gene-CCO56_RS13110;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=CCO56_RS13110;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 60427 60900 . + . ID=gene-CCO56_RS13115;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=CCO56_RS13115;old_locus_tag=CCO56_13110 NZ_NPMB01000006.1 Protein Homology CDS 60427 60900 . + 0 ID=cds-WP_000856695.1;Parent=gene-CCO56_RS13115;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=CCO56_RS13115;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 60999 63329 . + . ID=gene-CCO56_RS13120;Name=CCO56_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13120;old_locus_tag=CCO56_13115 NZ_NPMB01000006.1 Protein Homology CDS 60999 63329 . + 0 ID=cds-WP_000980654.1;Parent=gene-CCO56_RS13120;Dbxref=GenBank:WP_000980654.1;Name=WP_000980654.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=CCO56_RS13120;product=Tex family protein;protein_id=WP_000980654.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 63766 63993 . + . ID=gene-CCO56_RS13130;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=CCO56_RS13130;old_locus_tag=CCO56_13125 NZ_NPMB01000006.1 Protein Homology CDS 63766 63993 . + 0 ID=cds-WP_001160955.1;Parent=gene-CCO56_RS13130;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=CCO56_RS13130;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 64012 66330 . + . ID=gene-CCO56_RS13135;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CCO56_RS13135;old_locus_tag=CCO56_13130 NZ_NPMB01000006.1 Protein Homology CDS 64012 66330 . + 0 ID=cds-WP_000736970.1;Parent=gene-CCO56_RS13135;Dbxref=GenBank:WP_000736970.1;Name=WP_000736970.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=CCO56_RS13135;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736970.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 66343 66579 . + . ID=gene-CCO56_RS13140;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=CCO56_RS13140;old_locus_tag=CCO56_13135 NZ_NPMB01000006.1 Protein Homology CDS 66343 66579 . + 0 ID=cds-WP_000157589.1;Parent=gene-CCO56_RS13140;Dbxref=GenBank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=CCO56_RS13140;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 66814 67740 . + . ID=gene-CCO56_RS13145;Name=CCO56_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13145;old_locus_tag=CCO56_13140 NZ_NPMB01000006.1 Protein Homology CDS 66814 67740 . + 0 ID=cds-WP_023259105.1;Parent=gene-CCO56_RS13145;Dbxref=GenBank:WP_023259105.1;Name=WP_023259105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=CCO56_RS13145;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_023259105.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 67776 68546 . - . ID=gene-CCO56_RS13150;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=CCO56_RS13150;old_locus_tag=CCO56_13145 NZ_NPMB01000006.1 Protein Homology CDS 67776 68546 . - 0 ID=cds-WP_000998138.1;Parent=gene-CCO56_RS13150;Dbxref=GenBank:WP_000998138.1;Name=WP_000998138.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=CCO56_RS13150;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998138.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 68584 69267 . + . ID=gene-CCO56_RS13155;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=CCO56_RS13155;old_locus_tag=CCO56_13150 NZ_NPMB01000006.1 Protein Homology CDS 68584 69267 . + 0 ID=cds-WP_000958733.1;Parent=gene-CCO56_RS13155;Dbxref=GenBank:WP_000958733.1;Name=WP_000958733.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=CCO56_RS13155;product=DNA utilization protein GntX;protein_id=WP_000958733.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 69326 69901 . + . ID=gene-CCO56_RS13160;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=CCO56_RS13160;old_locus_tag=CCO56_13155 NZ_NPMB01000006.1 Protein Homology CDS 69326 69901 . + 0 ID=cds-WP_000619387.1;Parent=gene-CCO56_RS13160;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=CCO56_RS13160;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 70278 71594 . + . ID=gene-CCO56_RS13165;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=CCO56_RS13165;old_locus_tag=CCO56_13160 NZ_NPMB01000006.1 Protein Homology CDS 70278 71594 . + 0 ID=cds-WP_001131741.1;Parent=gene-CCO56_RS13165;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=CCO56_RS13165;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 71713 73791 . - . ID=gene-CCO56_RS13170;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=CCO56_RS13170;old_locus_tag=CCO56_13165 NZ_NPMB01000006.1 Protein Homology CDS 71713 73791 . - 0 ID=cds-WP_000428707.1;Parent=gene-CCO56_RS13170;Dbxref=GenBank:WP_000428707.1;Name=WP_000428707.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=CCO56_RS13170;product=4-alpha-glucanotransferase;protein_id=WP_000428707.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 73801 76194 . - . ID=gene-CCO56_RS13175;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=CCO56_RS13175;old_locus_tag=CCO56_13170 NZ_NPMB01000006.1 Protein Homology CDS 73801 76194 . - 0 ID=cds-WP_000082247.1;Parent=gene-CCO56_RS13175;Dbxref=GenBank:WP_000082247.1;Name=WP_000082247.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=CCO56_RS13175;product=maltodextrin phosphorylase;protein_id=WP_000082247.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 76788 79493 . + . ID=gene-CCO56_RS13180;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=CCO56_RS13180;old_locus_tag=CCO56_13175 NZ_NPMB01000006.1 Protein Homology CDS 76788 79493 . + 0 ID=cds-WP_000907030.1;Parent=gene-CCO56_RS13180;Dbxref=GenBank:WP_000907030.1;Name=WP_000907030.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=CCO56_RS13180;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907030.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 79561 80319 . - . ID=gene-CCO56_RS13185;Name=CCO56_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13185;old_locus_tag=CCO56_13180 NZ_NPMB01000006.1 Protein Homology CDS 79561 80319 . - 0 ID=cds-WP_000815084.1;Parent=gene-CCO56_RS13185;Dbxref=GenBank:WP_000815084.1;Name=WP_000815084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=CCO56_RS13185;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815084.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 80413 81243 . - . ID=gene-CCO56_RS13190;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=CCO56_RS13190;old_locus_tag=CCO56_13185 NZ_NPMB01000006.1 Protein Homology CDS 80413 81243 . - 0 ID=cds-WP_000928701.1;Parent=gene-CCO56_RS13190;Dbxref=GenBank:WP_000928701.1;Name=WP_000928701.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=CCO56_RS13190;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928701.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 81319 81645 . - . ID=gene-CCO56_RS13195;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=CCO56_RS13195;old_locus_tag=CCO56_13190 NZ_NPMB01000006.1 Protein Homology CDS 81319 81645 . - 0 ID=cds-WP_000434523.1;Parent=gene-CCO56_RS13195;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=CCO56_RS13195;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 81844 83352 . + . ID=gene-CCO56_RS13200;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=CCO56_RS13200;old_locus_tag=CCO56_13195 NZ_NPMB01000006.1 Protein Homology CDS 81844 83352 . + 0 ID=cds-WP_023213337.1;Parent=gene-CCO56_RS13200;Dbxref=GenBank:WP_023213337.1;Name=WP_023213337.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=CCO56_RS13200;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_023213337.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 83444 85891 . - . ID=gene-CCO56_RS13205;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=CCO56_RS13205;old_locus_tag=CCO56_13200 NZ_NPMB01000006.1 Protein Homology CDS 83444 85891 . - 0 ID=cds-WP_000993424.1;Parent=gene-CCO56_RS13205;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=CCO56_RS13205;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 85911 87344 . - . ID=gene-CCO56_RS13210;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=CCO56_RS13210;old_locus_tag=CCO56_13205 NZ_NPMB01000006.1 Protein Homology CDS 85911 87344 . - 0 ID=cds-WP_001197669.1;Parent=gene-CCO56_RS13210;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=CCO56_RS13210;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 87344 88639 . - . ID=gene-CCO56_RS13215;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=CCO56_RS13215;old_locus_tag=CCO56_13210 NZ_NPMB01000006.1 Protein Homology CDS 87344 88639 . - 0 ID=cds-WP_000253995.1;Parent=gene-CCO56_RS13215;Dbxref=GenBank:WP_000253995.1;Name=WP_000253995.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=CCO56_RS13215;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253995.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 88654 90630 . - . ID=gene-CCO56_RS13220;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO56_RS13220;old_locus_tag=CCO56_13215 NZ_NPMB01000006.1 Protein Homology CDS 88654 90630 . - 0 ID=cds-WP_080176940.1;Parent=gene-CCO56_RS13220;Dbxref=GenBank:WP_080176940.1;Name=WP_080176940.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=CCO56_RS13220;product=glycogen debranching protein GlgX;protein_id=WP_080176940.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 90627 92813 . - . ID=gene-CCO56_RS13225;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=CCO56_RS13225;old_locus_tag=CCO56_13220 NZ_NPMB01000006.1 Protein Homology CDS 90627 92813 . - 0 ID=cds-WP_000098558.1;Parent=gene-CCO56_RS13225;Dbxref=GenBank:WP_000098558.1;Name=WP_000098558.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=CCO56_RS13225;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098558.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 93191 94297 . - . ID=gene-CCO56_RS13230;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO56_RS13230;old_locus_tag=CCO56_13225 NZ_NPMB01000006.1 Protein Homology CDS 93191 94297 . - 0 ID=cds-WP_000799940.1;Parent=gene-CCO56_RS13230;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=CCO56_RS13230;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11 NZ_NPMB01000006.1 RefSeq pseudogene 94424 94798 . + . ID=gene-CCO56_RS13235;Name=CCO56_RS13235;end_range=94798,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS13235;old_locus_tag=CCO56_13230;partial=true;pseudo=true NZ_NPMB01000006.1 Protein Homology CDS 94424 94798 . + 0 ID=cds-CCO56_RS13235;Parent=gene-CCO56_RS13235;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=94798,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=CCO56_RS13235;partial=true;product=MarC family protein;pseudo=true;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 94721 96061 . - . ID=gene-CCO56_RS13240;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=CCO56_RS13240;old_locus_tag=CCO56_13235 NZ_NPMB01000006.1 Protein Homology CDS 94721 96061 . - 0 ID=cds-WP_000105950.1;Parent=gene-CCO56_RS13240;Dbxref=GenBank:WP_000105950.1;Name=WP_000105950.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=CCO56_RS13240;product=gluconate transporter;protein_id=WP_000105950.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 96058 96591 . - . ID=gene-CCO56_RS13245;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CCO56_RS13245;old_locus_tag=CCO56_13240 NZ_NPMB01000006.1 Protein Homology CDS 96058 96591 . - 0 ID=cds-WP_000108342.1;Parent=gene-CCO56_RS13245;Dbxref=GenBank:WP_000108342.1;Name=WP_000108342.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=CCO56_RS13245;product=gluconokinase;protein_id=WP_000108342.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 96730 97725 . - . ID=gene-CCO56_RS13250;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=CCO56_RS13250;old_locus_tag=CCO56_13245 NZ_NPMB01000006.1 Protein Homology CDS 96730 97725 . - 0 ID=cds-WP_000730239.1;Parent=gene-CCO56_RS13250;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=CCO56_RS13250;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 97855 98550 . - . ID=gene-CCO56_RS13255;Name=CCO56_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13255;old_locus_tag=CCO56_13250 NZ_NPMB01000006.1 Protein Homology CDS 97855 98550 . - 0 ID=cds-WP_000639789.1;Parent=gene-CCO56_RS13255;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=CCO56_RS13255;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 98674 99711 . - . ID=gene-CCO56_RS13260;Name=CCO56_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13260;old_locus_tag=CCO56_13255 NZ_NPMB01000006.1 Protein Homology CDS 98674 99711 . - 0 ID=cds-WP_080176939.1;Parent=gene-CCO56_RS13260;Dbxref=GenBank:WP_080176939.1;Name=WP_080176939.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=CCO56_RS13260;product=oxidoreductase;protein_id=WP_080176939.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 100178 100666 . + . ID=gene-CCO56_RS13265;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=CCO56_RS13265;old_locus_tag=CCO56_13260 NZ_NPMB01000006.1 Protein Homology CDS 100178 100666 . + 0 ID=cds-WP_080176938.1;Parent=gene-CCO56_RS13265;Dbxref=GenBank:WP_080176938.1;Name=WP_080176938.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=CCO56_RS13265;product=N-acetyltransferase;protein_id=WP_080176938.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 100931 102145 . + . ID=gene-CCO56_RS13270;Name=CCO56_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13270;old_locus_tag=CCO56_13265 NZ_NPMB01000006.1 Protein Homology CDS 100931 102145 . + 0 ID=cds-WP_001631133.1;Parent=gene-CCO56_RS13270;Dbxref=GenBank:WP_001631133.1;Name=WP_001631133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=CCO56_RS13270;product=PfkB family carbohydrate kinase;protein_id=WP_001631133.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 102161 102922 . + . ID=gene-CCO56_RS13275;Name=CCO56_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13275;old_locus_tag=CCO56_13270 NZ_NPMB01000006.1 Protein Homology CDS 102161 102922 . + 0 ID=cds-WP_001066515.1;Parent=gene-CCO56_RS13275;Dbxref=GenBank:WP_001066515.1;Name=WP_001066515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=CCO56_RS13275;product=glutamine amidotransferase;protein_id=WP_001066515.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 102976 103947 . + . ID=gene-CCO56_RS13280;Name=CCO56_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13280;old_locus_tag=CCO56_13275 NZ_NPMB01000006.1 Protein Homology CDS 102976 103947 . + 0 ID=cds-WP_001038948.1;Parent=gene-CCO56_RS13280;Dbxref=GenBank:WP_001038948.1;Name=WP_001038948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=CCO56_RS13280;product=DMT family transporter;protein_id=WP_001038948.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 103944 104978 . + . ID=gene-CCO56_RS13285;Name=CCO56_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13285;old_locus_tag=CCO56_13280 NZ_NPMB01000006.1 Protein Homology CDS 103944 104978 . + 0 ID=cds-WP_000675709.1;Parent=gene-CCO56_RS13285;Dbxref=GenBank:WP_000675709.1;Name=WP_000675709.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=CCO56_RS13285;product=phosphotriesterase family protein;protein_id=WP_000675709.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 105023 106765 . - . ID=gene-CCO56_RS13290;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=CCO56_RS13290;old_locus_tag=CCO56_13285 NZ_NPMB01000006.1 Protein Homology CDS 105023 106765 . - 0 ID=cds-WP_000805102.1;Parent=gene-CCO56_RS13290;Dbxref=GenBank:WP_000805102.1;Name=WP_000805102.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=CCO56_RS13290;product=gamma-glutamyltransferase;protein_id=WP_000805102.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 106891 107307 . + . ID=gene-CCO56_RS13295;Name=CCO56_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13295;old_locus_tag=CCO56_13290 NZ_NPMB01000006.1 Protein Homology CDS 106891 107307 . + 0 ID=cds-WP_000826034.1;Parent=gene-CCO56_RS13295;Dbxref=GenBank:WP_000826034.1;Name=WP_000826034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=CCO56_RS13295;product=DUF2756 family protein;protein_id=WP_000826034.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 107320 108060 . - . ID=gene-CCO56_RS13300;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=CCO56_RS13300;old_locus_tag=CCO56_13295 NZ_NPMB01000006.1 Protein Homology CDS 107320 108060 . - 0 ID=cds-WP_000073548.1;Parent=gene-CCO56_RS13300;Dbxref=GenBank:WP_000073548.1;Name=WP_000073548.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=CCO56_RS13300;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073548.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 108057 109127 . - . ID=gene-CCO56_RS13305;Name=CCO56_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13305;old_locus_tag=CCO56_13300 NZ_NPMB01000006.1 Protein Homology CDS 108057 109127 . - 0 ID=cds-WP_000907842.1;Parent=gene-CCO56_RS13305;Dbxref=GenBank:WP_000907842.1;Name=WP_000907842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=CCO56_RS13305;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907842.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 109130 109975 . - . ID=gene-CCO56_RS13310;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=CCO56_RS13310;old_locus_tag=CCO56_13305 NZ_NPMB01000006.1 Protein Homology CDS 109130 109975 . - 0 ID=cds-WP_000572196.1;Parent=gene-CCO56_RS13310;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=CCO56_RS13310;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 109972 110859 . - . ID=gene-CCO56_RS13315;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=CCO56_RS13315;old_locus_tag=CCO56_13310 NZ_NPMB01000006.1 Protein Homology CDS 109972 110859 . - 0 ID=cds-WP_000099303.1;Parent=gene-CCO56_RS13315;Dbxref=GenBank:WP_000099303.1;Name=WP_000099303.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=CCO56_RS13315;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099303.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 110964 112280 . - . ID=gene-CCO56_RS13320;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=CCO56_RS13320;old_locus_tag=CCO56_13315 NZ_NPMB01000006.1 Protein Homology CDS 110964 112280 . - 0 ID=cds-WP_000624747.1;Parent=gene-CCO56_RS13320;Dbxref=GenBank:WP_000624747.1;Name=WP_000624747.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=CCO56_RS13320;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624747.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 112513 112791 . - . ID=gene-CCO56_RS13325;Name=CCO56_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13325;old_locus_tag=CCO56_13320 NZ_NPMB01000006.1 Protein Homology CDS 112513 112791 . - 0 ID=cds-WP_000621258.1;Parent=gene-CCO56_RS13325;Dbxref=GenBank:WP_000621258.1;Name=WP_000621258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621258.1;locus_tag=CCO56_RS13325;product=hypothetical protein;protein_id=WP_000621258.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 112955 113668 . - . ID=gene-CCO56_RS13330;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=CCO56_RS13330;old_locus_tag=CCO56_13325 NZ_NPMB01000006.1 Protein Homology CDS 112955 113668 . - 0 ID=cds-WP_000416114.1;Parent=gene-CCO56_RS13330;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=CCO56_RS13330;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 113670 114437 . - . ID=gene-CCO56_RS13335;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=CCO56_RS13335;old_locus_tag=CCO56_13330 NZ_NPMB01000006.1 Protein Homology CDS 113670 114437 . - 0 ID=cds-WP_000082083.1;Parent=gene-CCO56_RS13335;Dbxref=GenBank:WP_000082083.1;Name=WP_000082083.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=CCO56_RS13335;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082083.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 114434 115711 . - . ID=gene-CCO56_RS13340;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=CCO56_RS13340;old_locus_tag=CCO56_13335 NZ_NPMB01000006.1 Protein Homology CDS 114434 115711 . - 0 ID=cds-WP_000803764.1;Parent=gene-CCO56_RS13340;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=CCO56_RS13340;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 115708 116634 . - . ID=gene-CCO56_RS13345;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=CCO56_RS13345;old_locus_tag=CCO56_13340 NZ_NPMB01000006.1 Protein Homology CDS 115708 116634 . - 0 ID=cds-WP_080176937.1;Parent=gene-CCO56_RS13345;Dbxref=GenBank:WP_080176937.1;Name=WP_080176937.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=CCO56_RS13345;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_080176937.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 116694 117803 . - . ID=gene-CCO56_RS13350;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=CCO56_RS13350;old_locus_tag=CCO56_13345 NZ_NPMB01000006.1 Protein Homology CDS 116694 117803 . - 0 ID=cds-WP_076166719.1;Parent=gene-CCO56_RS13350;Dbxref=GenBank:WP_076166719.1;Name=WP_076166719.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=CCO56_RS13350;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_076166719.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 118225 118608 . + . ID=gene-CCO56_RS13355;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=CCO56_RS13355;old_locus_tag=CCO56_13350 NZ_NPMB01000006.1 Protein Homology CDS 118225 118608 . + 0 ID=cds-WP_000778873.1;Parent=gene-CCO56_RS13355;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=CCO56_RS13355;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 118586 118720 . + . ID=gene-CCO56_RS13360;Name=CCO56_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13360;old_locus_tag=CCO56_13355 NZ_NPMB01000006.1 Protein Homology CDS 118586 118720 . + 0 ID=cds-WP_001517957.1;Parent=gene-CCO56_RS13360;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=CCO56_RS13360;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 118804 119907 . - . ID=gene-CCO56_RS13365;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=CCO56_RS13365;old_locus_tag=CCO56_13360 NZ_NPMB01000006.1 Protein Homology CDS 118804 119907 . - 0 ID=cds-WP_001528146.1;Parent=gene-CCO56_RS13365;Dbxref=GenBank:WP_001528146.1;Name=WP_001528146.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=CCO56_RS13365;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001528146.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 120229 121083 . - . ID=gene-CCO56_RS13370;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=CCO56_RS13370;old_locus_tag=CCO56_13365 NZ_NPMB01000006.1 Protein Homology CDS 120229 121083 . - 0 ID=cds-WP_000159621.1;Parent=gene-CCO56_RS13370;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=CCO56_RS13370;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 121329 122384 . - . ID=gene-CCO56_RS13375;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=CCO56_RS13375;old_locus_tag=CCO56_13370 NZ_NPMB01000006.1 Protein Homology CDS 121329 122384 . - 0 ID=cds-WP_001081707.1;Parent=gene-CCO56_RS13375;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=CCO56_RS13375;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 122377 123045 . - . ID=gene-CCO56_RS13380;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=CCO56_RS13380;old_locus_tag=CCO56_13375 NZ_NPMB01000006.1 Protein Homology CDS 122377 123045 . - 0 ID=cds-WP_000617729.1;Parent=gene-CCO56_RS13380;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=CCO56_RS13380;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 123048 124523 . - . ID=gene-CCO56_RS13385;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CCO56_RS13385;old_locus_tag=CCO56_13380 NZ_NPMB01000006.1 Protein Homology CDS 123048 124523 . - 0 ID=cds-WP_001118681.1;Parent=gene-CCO56_RS13385;Dbxref=GenBank:WP_001118681.1;Name=WP_001118681.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=CCO56_RS13385;product=signal recognition particle-docking protein FtsY;protein_id=WP_001118681.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 124649 125245 . + . ID=gene-CCO56_RS13390;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CCO56_RS13390;old_locus_tag=CCO56_13385 NZ_NPMB01000006.1 Protein Homology CDS 124649 125245 . + 0 ID=cds-WP_000743275.1;Parent=gene-CCO56_RS13390;Dbxref=GenBank:WP_000743275.1;Name=WP_000743275.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=CCO56_RS13390;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743275.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 125235 125504 . + . ID=gene-CCO56_RS13395;Name=CCO56_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13395;old_locus_tag=CCO56_13390 NZ_NPMB01000006.1 Protein Homology CDS 125235 125504 . + 0 ID=cds-WP_000906762.1;Parent=gene-CCO56_RS13395;Dbxref=GenBank:WP_000906762.1;Name=WP_000906762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=CCO56_RS13395;product=DUF1145 family protein;protein_id=WP_000906762.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 125526 125897 . - . ID=gene-CCO56_RS13400;Name=CCO56_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13400;old_locus_tag=CCO56_13395 NZ_NPMB01000006.1 Protein Homology CDS 125526 125897 . - 0 ID=cds-WP_000042855.1;Parent=gene-CCO56_RS13400;Dbxref=GenBank:WP_000042855.1;Name=WP_000042855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=CCO56_RS13400;product=DUF2500 domain-containing protein;protein_id=WP_000042855.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 126039 126665 . + . ID=gene-CCO56_RS13405;Name=CCO56_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13405;old_locus_tag=CCO56_13400 NZ_NPMB01000006.1 Protein Homology CDS 126039 126665 . + 0 ID=cds-WP_000964735.1;Parent=gene-CCO56_RS13405;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=CCO56_RS13405;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 126746 128944 . + . ID=gene-CCO56_RS13410;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=CCO56_RS13410;old_locus_tag=CCO56_13405 NZ_NPMB01000006.1 Protein Homology CDS 126746 128944 . + 0 ID=cds-WP_094882055.1;Parent=gene-CCO56_RS13410;Dbxref=GenBank:WP_094882055.1;Name=WP_094882055.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=CCO56_RS13410;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_094882055.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 129144 130787 . + . ID=gene-CCO56_RS13415;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=CCO56_RS13415;old_locus_tag=CCO56_13410 NZ_NPMB01000006.1 Protein Homology CDS 129144 130787 . + 0 ID=cds-WP_000789678.1;Parent=gene-CCO56_RS13415;Dbxref=GenBank:WP_000789678.1;Name=WP_000789678.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=CCO56_RS13415;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789678.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 130811 131056 . - . ID=gene-CCO56_RS13420;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=CCO56_RS13420;old_locus_tag=CCO56_13415 NZ_NPMB01000006.1 Protein Homology CDS 130811 131056 . - 0 ID=cds-WP_001541054.1;Parent=gene-CCO56_RS13420;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=CCO56_RS13420;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 131226 131891 . + . ID=gene-CCO56_RS13425;Name=CCO56_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13425;old_locus_tag=CCO56_13420 NZ_NPMB01000006.1 Protein Homology CDS 131226 131891 . + 0 ID=cds-WP_001531644.1;Parent=gene-CCO56_RS13425;Dbxref=GenBank:WP_001531644.1;Name=WP_001531644.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=CCO56_RS13425;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001531644.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 131964 132521 . + . ID=gene-CCO56_RS13430;Name=CCO56_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13430;old_locus_tag=CCO56_13425 NZ_NPMB01000006.1 Protein Homology CDS 131964 132521 . + 0 ID=cds-WP_001245278.1;Parent=gene-CCO56_RS13430;Dbxref=GenBank:WP_001245278.1;Name=WP_001245278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=CCO56_RS13430;product=DcrB family lipoprotein;protein_id=WP_001245278.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 132525 133784 . - . ID=gene-CCO56_RS13435;Name=CCO56_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13435;old_locus_tag=CCO56_13430 NZ_NPMB01000006.1 Protein Homology CDS 132525 133784 . - 0 ID=cds-WP_077905455.1;Parent=gene-CCO56_RS13435;Dbxref=GenBank:WP_077905455.1;Name=WP_077905455.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=CCO56_RS13435;product=MFS transporter;protein_id=WP_077905455.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 133874 134923 . + . ID=gene-CCO56_RS13440;Name=CCO56_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13440;old_locus_tag=CCO56_13435 NZ_NPMB01000006.1 Protein Homology CDS 133874 134923 . + 0 ID=cds-WP_000179588.1;Parent=gene-CCO56_RS13440;Dbxref=GenBank:WP_000179588.1;Name=WP_000179588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=CCO56_RS13440;product=AI-2E family transporter;protein_id=WP_000179588.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 134975 135553 . + . ID=gene-CCO56_RS13445;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=CCO56_RS13445;old_locus_tag=CCO56_13440 NZ_NPMB01000006.1 Protein Homology CDS 134975 135553 . + 0 ID=cds-WP_000284366.1;Parent=gene-CCO56_RS13445;Dbxref=GenBank:WP_000284366.1;Name=WP_000284366.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=CCO56_RS13445;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000284366.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 135645 136046 . + . ID=gene-CCO56_RS13450;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=CCO56_RS13450;old_locus_tag=CCO56_13445 NZ_NPMB01000006.1 Protein Homology CDS 135645 136046 . + 0 ID=cds-WP_001190057.1;Parent=gene-CCO56_RS13450;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=CCO56_RS13450;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 136148 137272 . - . ID=gene-CCO56_RS13455;Name=CCO56_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13455;old_locus_tag=CCO56_13450 NZ_NPMB01000006.1 Protein Homology CDS 136148 137272 . - 0 ID=cds-WP_001214468.1;Parent=gene-CCO56_RS13455;Dbxref=GenBank:WP_001214468.1;Name=WP_001214468.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=CCO56_RS13455;product=ABC transporter permease;protein_id=WP_001214468.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 137272 140013 . - . ID=gene-CCO56_RS13460;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=CCO56_RS13460;old_locus_tag=CCO56_13455 NZ_NPMB01000006.1 Protein Homology CDS 137272 140013 . - 0 ID=cds-WP_000202924.1;Parent=gene-CCO56_RS13460;Dbxref=GenBank:WP_000202924.1;Name=WP_000202924.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=CCO56_RS13460;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000202924.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 140010 141077 . - . ID=gene-CCO56_RS13465;Name=CCO56_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13465;old_locus_tag=CCO56_13460 NZ_NPMB01000006.1 Protein Homology CDS 140010 141077 . - 0 ID=cds-WP_080176936.1;Parent=gene-CCO56_RS13465;Dbxref=GenBank:WP_080176936.1;Name=WP_080176936.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=CCO56_RS13465;product=HlyD family secretion protein;protein_id=WP_080176936.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 141383 142579 . - . ID=gene-CCO56_RS13470;Name=CCO56_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13470;old_locus_tag=CCO56_13465 NZ_NPMB01000006.1 Protein Homology CDS 141383 142579 . - 0 ID=cds-WP_023213324.1;Parent=gene-CCO56_RS13470;Dbxref=GenBank:WP_023213324.1;Name=WP_023213324.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=CCO56_RS13470;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_023213324.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 142810 144306 . + . ID=gene-CCO56_RS13475;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=CCO56_RS13475;old_locus_tag=CCO56_13470 NZ_NPMB01000006.1 Protein Homology CDS 142810 144306 . + 0 ID=cds-WP_000902764.1;Parent=gene-CCO56_RS13475;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=CCO56_RS13475;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 144448 144783 . - . ID=gene-CCO56_RS13480;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=CCO56_RS13480;old_locus_tag=CCO56_13475 NZ_NPMB01000006.1 Protein Homology CDS 144448 144783 . - 0 ID=cds-WP_000626193.1;Parent=gene-CCO56_RS13480;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=CCO56_RS13480;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 145171 145605 . + . ID=gene-CCO56_RS13485;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=CCO56_RS13485;old_locus_tag=CCO56_13480 NZ_NPMB01000006.1 Protein Homology CDS 145171 145605 . + 0 ID=cds-WP_000323565.1;Parent=gene-CCO56_RS13485;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=CCO56_RS13485;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 145930 147402 . + . ID=gene-CCO56_RS13490;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=CCO56_RS13490;old_locus_tag=CCO56_13485 NZ_NPMB01000006.1 Protein Homology CDS 145930 147402 . + 0 ID=cds-WP_001098274.1;Parent=gene-CCO56_RS13490;Dbxref=GenBank:WP_001098274.1;Name=WP_001098274.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=CCO56_RS13490;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098274.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 147494 148252 . - . ID=gene-CCO56_RS13495;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=CCO56_RS13495;old_locus_tag=CCO56_13490 NZ_NPMB01000006.1 Protein Homology CDS 147494 148252 . - 0 ID=cds-WP_001631171.1;Parent=gene-CCO56_RS13495;Dbxref=GenBank:WP_001631171.1;Name=WP_001631171.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=CCO56_RS13495;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001631171.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 148259 150301 . - . ID=gene-CCO56_RS13500;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=CCO56_RS13500;old_locus_tag=CCO56_13495 NZ_NPMB01000006.1 Protein Homology CDS 148259 150301 . - 0 ID=cds-WP_001528193.1;Parent=gene-CCO56_RS13500;Dbxref=GenBank:WP_001528193.1;Name=WP_001528193.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=CCO56_RS13500;product=oligopeptidase A;protein_id=WP_001528193.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 150483 151754 . - . ID=gene-CCO56_RS13505;Name=CCO56_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13505;old_locus_tag=CCO56_13500 NZ_NPMB01000006.1 Protein Homology CDS 150483 151754 . - 0 ID=cds-WP_023233350.1;Parent=gene-CCO56_RS13505;Dbxref=GenBank:WP_023233350.1;Name=WP_023233350.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=CCO56_RS13505;product=acid phosphatase;protein_id=WP_023233350.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 151965 152807 . + . ID=gene-CCO56_RS13510;Name=CCO56_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13510;old_locus_tag=CCO56_13505 NZ_NPMB01000006.1 Protein Homology CDS 151965 152807 . + 0 ID=cds-WP_000954233.1;Parent=gene-CCO56_RS13510;Dbxref=GenBank:WP_000954233.1;Name=WP_000954233.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=CCO56_RS13510;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954233.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 152912 154264 . + . ID=gene-CCO56_RS13515;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=CCO56_RS13515;old_locus_tag=CCO56_13510 NZ_NPMB01000006.1 Protein Homology CDS 152912 154264 . + 0 ID=cds-WP_000160764.1;Parent=gene-CCO56_RS13515;Dbxref=GenBank:WP_000160764.1;Name=WP_000160764.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=CCO56_RS13515;product=glutathione-disulfide reductase;protein_id=WP_000160764.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 154311 155354 . - . ID=gene-CCO56_RS13520;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=CCO56_RS13520;old_locus_tag=CCO56_13515 NZ_NPMB01000006.1 Protein Homology CDS 154311 155354 . - 0 ID=cds-WP_023217415.1;Parent=gene-CCO56_RS13520;Dbxref=GenBank:WP_023217415.1;Name=WP_023217415.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=CCO56_RS13520;product=fructose-asparagine asparaginase;protein_id=WP_023217415.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 155413 156732 . - . ID=gene-CCO56_RS13525;Name=CCO56_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13525;old_locus_tag=CCO56_13520 NZ_NPMB01000006.1 Protein Homology CDS 155413 156732 . - 0 ID=cds-WP_000498935.1;Parent=gene-CCO56_RS13525;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=CCO56_RS13525;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 156786 157631 . - . ID=gene-CCO56_RS13530;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=CCO56_RS13530;old_locus_tag=CCO56_13525 NZ_NPMB01000006.1 Protein Homology CDS 156786 157631 . - 0 ID=cds-WP_000028427.1;Parent=gene-CCO56_RS13530;Dbxref=GenBank:WP_000028427.1;Name=WP_000028427.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=CCO56_RS13530;product=fructose-aspartate kinase;protein_id=WP_000028427.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 157695 158672 . - . ID=gene-CCO56_RS13535;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=CCO56_RS13535;old_locus_tag=CCO56_13530 NZ_NPMB01000006.1 Protein Homology CDS 157695 158672 . - 0 ID=cds-WP_077905336.1;Parent=gene-CCO56_RS13535;Dbxref=GenBank:WP_077905336.1;Name=WP_077905336.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=CCO56_RS13535;product=6-phosphofructose-aspartate deglycase;protein_id=WP_077905336.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 158848 159567 . - . ID=gene-CCO56_RS13540;Name=CCO56_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13540;old_locus_tag=CCO56_13535 NZ_NPMB01000006.1 Protein Homology CDS 158848 159567 . - 0 ID=cds-WP_000572566.1;Parent=gene-CCO56_RS13540;Dbxref=GenBank:WP_000572566.1;Name=WP_000572566.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=CCO56_RS13540;product=GntR family transcriptional regulator;protein_id=WP_000572566.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 159893 161542 . + . ID=gene-CCO56_RS13545;Name=CCO56_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13545;old_locus_tag=CCO56_13540 NZ_NPMB01000006.1 Protein Homology CDS 159893 161542 . + 0 ID=cds-WP_000934254.1;Parent=gene-CCO56_RS13545;Dbxref=GenBank:WP_000934254.1;Name=WP_000934254.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=CCO56_RS13545;product=alpha%2Calpha-trehalase;protein_id=WP_000934254.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 161555 163144 . - . ID=gene-CCO56_RS13550;Name=CCO56_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13550;old_locus_tag=CCO56_13545 NZ_NPMB01000006.1 Protein Homology CDS 161555 163144 . - 0 ID=cds-WP_023215178.1;Parent=gene-CCO56_RS13550;Dbxref=GenBank:WP_023215178.1;Name=WP_023215178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=CCO56_RS13550;product=STY4199 family HEPN domain-containing protein;protein_id=WP_023215178.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 163425 163781 . + . ID=gene-CCO56_RS13555;Name=CCO56_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13555;old_locus_tag=CCO56_13550 NZ_NPMB01000006.1 Protein Homology CDS 163425 163781 . + 0 ID=cds-WP_001120251.1;Parent=gene-CCO56_RS13555;Dbxref=GenBank:WP_001120251.1;Name=WP_001120251.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=CCO56_RS13555;product=glycoside hydrolase family protein;protein_id=WP_001120251.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 163787 164389 . - . ID=gene-CCO56_RS13560;Name=CCO56_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13560;old_locus_tag=CCO56_13555 NZ_NPMB01000006.1 Protein Homology CDS 163787 164389 . - 0 ID=cds-WP_001196081.1;Parent=gene-CCO56_RS13560;Dbxref=GenBank:WP_001196081.1;Name=WP_001196081.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=CCO56_RS13560;product=response regulator transcription factor;protein_id=WP_001196081.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 165020 165919 . + . ID=gene-CCO56_RS13565;Name=CCO56_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13565;old_locus_tag=CCO56_13560 NZ_NPMB01000006.1 Protein Homology CDS 165020 165919 . + 0 ID=cds-WP_023208289.1;Parent=gene-CCO56_RS13565;Dbxref=GenBank:WP_023208289.1;Name=WP_023208289.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=CCO56_RS13565;product=LysR family transcriptional regulator;protein_id=WP_023208289.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 165992 167020 . + . ID=gene-CCO56_RS13570;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=CCO56_RS13570;old_locus_tag=CCO56_13565 NZ_NPMB01000006.1 Protein Homology CDS 165992 167020 . + 0 ID=cds-WP_000191230.1;Parent=gene-CCO56_RS13570;Dbxref=GenBank:WP_000191230.1;Name=WP_000191230.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=CCO56_RS13570;product=inner membrane protein YhjD;protein_id=WP_000191230.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 167371 168693 . + . ID=gene-CCO56_RS13575;Name=CCO56_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13575;old_locus_tag=CCO56_13570 NZ_NPMB01000006.1 Protein Homology CDS 167371 168693 . + 0 ID=cds-WP_001148981.1;Parent=gene-CCO56_RS13575;Dbxref=GenBank:WP_001148981.1;Name=WP_001148981.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=CCO56_RS13575;product=MFS transporter;protein_id=WP_001148981.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 168733 170793 . - . ID=gene-CCO56_RS13580;Name=CCO56_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13580;old_locus_tag=CCO56_13575 NZ_NPMB01000006.1 Protein Homology CDS 168733 170793 . - 0 ID=cds-WP_000158689.1;Parent=gene-CCO56_RS13580;Dbxref=GenBank:WP_000158689.1;Name=WP_000158689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=CCO56_RS13580;product=AsmA family protein;protein_id=WP_000158689.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 170903 171670 . - . ID=gene-CCO56_RS13585;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=CCO56_RS13585;old_locus_tag=CCO56_13580 NZ_NPMB01000006.1 Protein Homology CDS 170903 171670 . - 0 ID=cds-WP_000595626.1;Parent=gene-CCO56_RS13585;Dbxref=GenBank:WP_000595626.1;Name=WP_000595626.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=CCO56_RS13585;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595626.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 171899 172828 . + . ID=gene-CCO56_RS13590;Name=CCO56_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13590;old_locus_tag=CCO56_13585 NZ_NPMB01000006.1 Protein Homology CDS 171899 172828 . + 0 ID=cds-WP_000037575.1;Parent=gene-CCO56_RS13590;Dbxref=GenBank:WP_000037575.1;Name=WP_000037575.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=CCO56_RS13590;product=sugar kinase;protein_id=WP_000037575.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 172882 174369 . - . ID=gene-CCO56_RS13595;Name=CCO56_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13595;old_locus_tag=CCO56_13590 NZ_NPMB01000006.1 Protein Homology CDS 172882 174369 . - 0 ID=cds-WP_001163182.1;Parent=gene-CCO56_RS13595;Dbxref=GenBank:WP_001163182.1;Name=WP_001163182.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=CCO56_RS13595;product=M16 family metallopeptidase;protein_id=WP_001163182.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 174589 175875 . - . ID=gene-CCO56_RS13600;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=CCO56_RS13600;old_locus_tag=CCO56_13595 NZ_NPMB01000006.1 Protein Homology CDS 174589 175875 . - 0 ID=cds-WP_000858228.1;Parent=gene-CCO56_RS13600;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=CCO56_RS13600;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 176033 178039 . - . ID=gene-CCO56_RS13605;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=CCO56_RS13605;old_locus_tag=CCO56_13600 NZ_NPMB01000006.1 Protein Homology CDS 176033 178039 . - 0 ID=cds-WP_001266362.1;Parent=gene-CCO56_RS13605;Dbxref=GenBank:WP_001266362.1;Name=WP_001266362.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=CCO56_RS13605;product=biofilm formation regulator HmsP;protein_id=WP_001266362.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 178213 181755 . - . ID=gene-CCO56_RS13615;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=CCO56_RS13615;old_locus_tag=CCO56_13610 NZ_NPMB01000006.1 Protein Homology CDS 178213 181755 . - 0 ID=cds-WP_053258874.1;Parent=gene-CCO56_RS13615;Dbxref=GenBank:WP_053258874.1;Name=WP_053258874.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=CCO56_RS13615;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_053258874.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 181737 182846 . - . ID=gene-CCO56_RS13620;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=CCO56_RS13620;old_locus_tag=CCO56_13615 NZ_NPMB01000006.1 Protein Homology CDS 181737 182846 . - 0 ID=cds-WP_080176945.1;Parent=gene-CCO56_RS13620;Dbxref=GenBank:WP_080176945.1;Name=WP_080176945.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=CCO56_RS13620;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_080176945.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 182850 185150 . - . ID=gene-CCO56_RS13625;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=CCO56_RS13625;old_locus_tag=CCO56_13620 NZ_NPMB01000006.1 Protein Homology CDS 182850 185150 . - 0 ID=cds-WP_061377064.1;Parent=gene-CCO56_RS13625;Dbxref=GenBank:WP_061377064.1;Name=WP_061377064.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=CCO56_RS13625;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_061377064.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 185161 187785 . - . ID=gene-CCO56_RS13630;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=CCO56_RS13630;old_locus_tag=CCO56_13625 NZ_NPMB01000006.1 Protein Homology CDS 185161 187785 . - 0 ID=cds-WP_001275333.1;Parent=gene-CCO56_RS13630;Dbxref=GenBank:WP_001275333.1;Name=WP_001275333.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=CCO56_RS13630;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_001275333.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 187782 188534 . - . ID=gene-CCO56_RS13635;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=CCO56_RS13635;old_locus_tag=CCO56_13630 NZ_NPMB01000006.1 Protein Homology CDS 187782 188534 . - 0 ID=cds-WP_000996123.1;Parent=gene-CCO56_RS13635;Dbxref=GenBank:WP_000996123.1;Name=WP_000996123.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=CCO56_RS13635;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996123.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 188535 188738 . - . ID=gene-CCO56_RS13640;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=CCO56_RS13640;old_locus_tag=CCO56_13635 NZ_NPMB01000006.1 Protein Homology CDS 188535 188738 . - 0 ID=cds-WP_000282616.1;Parent=gene-CCO56_RS13640;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=CCO56_RS13640;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 188983 190554 . + . ID=gene-CCO56_RS13645;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=CCO56_RS13645;old_locus_tag=CCO56_13640 NZ_NPMB01000006.1 Protein Homology CDS 188983 190554 . + 0 ID=cds-WP_001205771.1;Parent=gene-CCO56_RS13645;Dbxref=GenBank:WP_001205771.1;Name=WP_001205771.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=CCO56_RS13645;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001205771.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 190551 190742 . + . ID=gene-CCO56_RS13650;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=CCO56_RS13650;old_locus_tag=CCO56_13645 NZ_NPMB01000006.1 Protein Homology CDS 190551 190742 . + 0 ID=cds-WP_000988321.1;Parent=gene-CCO56_RS13650;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=CCO56_RS13650;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 190739 192418 . + . ID=gene-CCO56_RS13655;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=CCO56_RS13655;old_locus_tag=CCO56_13650 NZ_NPMB01000006.1 Protein Homology CDS 190739 192418 . + 0 ID=cds-WP_076166734.1;Parent=gene-CCO56_RS13655;Dbxref=GenBank:WP_076166734.1;Name=WP_076166734.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=CCO56_RS13655;product=cellulose biosynthesis protein BcsG;protein_id=WP_076166734.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 192500 192607 . - . ID=gene-CCO56_RS13660;Name=CCO56_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13660;old_locus_tag=CCO56_13655 NZ_NPMB01000006.1 Protein Homology CDS 192500 192607 . - 0 ID=cds-WP_001537650.1;Parent=gene-CCO56_RS13660;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=CCO56_RS13660;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11 NZ_NPMB01000006.1 RefSeq pseudogene 192980 193132 . + . ID=gene-CCO56_RS23810;Name=CCO56_RS23810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23810;old_locus_tag=CCO56_13665;partial=true;pseudo=true;start_range=.,192980 NZ_NPMB01000006.1 Protein Homology CDS 192980 193132 . + 0 ID=cds-CCO56_RS23810;Parent=gene-CCO56_RS23810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.6;locus_tag=CCO56_RS23810;partial=true;product=PLP-dependent transferase;pseudo=true;start_range=.,192980;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 193250 194548 . + . ID=gene-CCO56_RS13675;Name=CCO56_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13675;old_locus_tag=CCO56_13670 NZ_NPMB01000006.1 Protein Homology CDS 193250 194548 . + 0 ID=cds-WP_001528183.1;Parent=gene-CCO56_RS13675;Dbxref=GenBank:WP_001528183.1;Name=WP_001528183.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=CCO56_RS13675;product=aromatic amino acid transport family protein;protein_id=WP_001528183.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 194649 195662 . - . ID=gene-CCO56_RS13680;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=CCO56_RS13680;old_locus_tag=CCO56_13675 NZ_NPMB01000006.1 Protein Homology CDS 194649 195662 . - 0 ID=cds-WP_023202873.1;Parent=gene-CCO56_RS13680;Dbxref=GenBank:WP_023202873.1;Name=WP_023202873.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=CCO56_RS13680;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_023202873.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 195659 196642 . - . ID=gene-CCO56_RS13685;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=CCO56_RS13685;old_locus_tag=CCO56_13680 NZ_NPMB01000006.1 Protein Homology CDS 195659 196642 . - 0 ID=cds-WP_001196503.1;Parent=gene-CCO56_RS13685;Dbxref=GenBank:WP_001196503.1;Name=WP_001196503.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=CCO56_RS13685;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196503.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 196653 197555 . - . ID=gene-CCO56_RS13690;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=CCO56_RS13690;old_locus_tag=CCO56_13685 NZ_NPMB01000006.1 Protein Homology CDS 196653 197555 . - 0 ID=cds-WP_000084690.1;Parent=gene-CCO56_RS13690;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=CCO56_RS13690;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 197565 198584 . - . ID=gene-CCO56_RS13695;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=CCO56_RS13695;old_locus_tag=CCO56_13690 NZ_NPMB01000006.1 Protein Homology CDS 197565 198584 . - 0 ID=cds-WP_000938843.1;Parent=gene-CCO56_RS13695;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=CCO56_RS13695;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 198741 200348 . - . ID=gene-CCO56_RS13700;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=CCO56_RS13700;old_locus_tag=CCO56_13695 NZ_NPMB01000006.1 Protein Homology CDS 198741 200348 . - 0 ID=cds-WP_000028047.1;Parent=gene-CCO56_RS13700;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=CCO56_RS13700;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 200907 202232 . - . ID=gene-CCO56_RS13705;Name=CCO56_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13705;old_locus_tag=CCO56_13700 NZ_NPMB01000006.1 Protein Homology CDS 200907 202232 . - 0 ID=cds-WP_001136076.1;Parent=gene-CCO56_RS13705;Dbxref=GenBank:WP_001136076.1;Name=WP_001136076.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=CCO56_RS13705;product=uracil-xanthine permease family protein;protein_id=WP_001136076.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 202290 203414 . - . ID=gene-CCO56_RS13710;Name=CCO56_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13710;old_locus_tag=CCO56_13705 NZ_NPMB01000006.1 Protein Homology CDS 202290 203414 . - 0 ID=cds-WP_023212599.1;Parent=gene-CCO56_RS13710;Dbxref=GenBank:WP_023212599.1;Name=WP_023212599.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=CCO56_RS13710;product=aryl-sulfate sulfotransferase;protein_id=WP_023212599.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 203564 204571 . + . ID=gene-CCO56_RS13715;Name=CCO56_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13715;old_locus_tag=CCO56_13710 NZ_NPMB01000006.1 Protein Homology CDS 203564 204571 . + 0 ID=cds-WP_080166881.1;Parent=gene-CCO56_RS13715;Dbxref=GenBank:WP_080166881.1;Name=WP_080166881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=CCO56_RS13715;product=substrate-binding domain-containing protein;protein_id=WP_080166881.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 204643 206610 . - . ID=gene-CCO56_RS13720;Name=CCO56_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13720;old_locus_tag=CCO56_13715 NZ_NPMB01000006.1 Protein Homology CDS 204643 206610 . - 0 ID=cds-WP_000484539.1;Parent=gene-CCO56_RS13720;Dbxref=GenBank:WP_000484539.1;Name=WP_000484539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484537.1;locus_tag=CCO56_RS13720;product=AlbA family DNA-binding domain-containing protein;protein_id=WP_000484539.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 206950 207462 . - . ID=gene-CCO56_RS13725;Name=CCO56_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13725;old_locus_tag=CCO56_13720 NZ_NPMB01000006.1 Protein Homology CDS 206950 207462 . - 0 ID=cds-WP_223195473.1;Parent=gene-CCO56_RS13725;Dbxref=GenBank:WP_223195473.1;Name=WP_223195473.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047080.2;locus_tag=CCO56_RS13725;product=phage integrase central domain-containing protein;protein_id=WP_223195473.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 207497 207630 . - . ID=gene-CCO56_RS13730;Name=CCO56_RS13730;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO56_RS13730;old_locus_tag=CCO56_13725 NZ_NPMB01000006.1 cmsearch ncRNA 207497 207630 . - . ID=rna-CCO56_RS13730;Parent=gene-CCO56_RS13730;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS13730;product=RtT sRNA NZ_NPMB01000006.1 cmsearch exon 207497 207630 . - . ID=exon-CCO56_RS13730-1;Parent=rna-CCO56_RS13730;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS13730;product=RtT sRNA NZ_NPMB01000006.1 RefSeq gene 207665 207741 . - . ID=gene-CCO56_RS13735;Name=CCO56_RS13735;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS13735;old_locus_tag=CCO56_13730 NZ_NPMB01000006.1 tRNAscan-SE tRNA 207665 207741 . - . ID=rna-CCO56_RS13735;Parent=gene-CCO56_RS13735;anticodon=(pos:complement(207705..207707));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS13735;product=tRNA-Pro NZ_NPMB01000006.1 tRNAscan-SE exon 207665 207741 . - . ID=exon-CCO56_RS13735-1;Parent=rna-CCO56_RS13735;anticodon=(pos:complement(207705..207707));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS13735;product=tRNA-Pro NZ_NPMB01000006.1 RefSeq gene 207832 209523 . - . ID=gene-CCO56_RS13740;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=CCO56_RS13740;old_locus_tag=CCO56_13735 NZ_NPMB01000006.1 Protein Homology CDS 207832 209523 . - 0 ID=cds-WP_001269247.1;Parent=gene-CCO56_RS13740;Dbxref=GenBank:WP_001269247.1;Name=WP_001269247.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=CCO56_RS13740;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269247.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 209754 210458 . - . ID=gene-CCO56_RS13745;Name=CCO56_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13745;old_locus_tag=CCO56_13740 NZ_NPMB01000006.1 Protein Homology CDS 209754 210458 . - 0 ID=cds-WP_000637073.1;Parent=gene-CCO56_RS13745;Dbxref=GenBank:WP_000637073.1;Name=WP_000637073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=CCO56_RS13745;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637073.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 210615 211196 . + . ID=gene-CCO56_RS13750;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=CCO56_RS13750;old_locus_tag=CCO56_13745 NZ_NPMB01000006.1 Protein Homology CDS 210615 211196 . + 0 ID=cds-WP_001188425.1;Parent=gene-CCO56_RS13750;Dbxref=GenBank:WP_001188425.1;Name=WP_001188425.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=CCO56_RS13750;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188425.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 211174 211614 . + . ID=gene-CCO56_RS13755;Name=CCO56_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13755;old_locus_tag=CCO56_13750 NZ_NPMB01000006.1 Protein Homology CDS 211174 211614 . + 0 ID=cds-WP_000619902.1;Parent=gene-CCO56_RS13755;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=CCO56_RS13755;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 211583 213916 . - . ID=gene-CCO56_RS13760;Name=CCO56_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13760;old_locus_tag=CCO56_13755 NZ_NPMB01000006.1 Protein Homology CDS 211583 213916 . - 0 ID=cds-WP_080176935.1;Parent=gene-CCO56_RS13760;Dbxref=GenBank:WP_080176935.1;Name=WP_080176935.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=CCO56_RS13760;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_080176935.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 214069 214731 . + . ID=gene-CCO56_RS13765;Name=CCO56_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13765;old_locus_tag=CCO56_13760 NZ_NPMB01000006.1 Protein Homology CDS 214069 214731 . + 0 ID=cds-WP_000747548.1;Parent=gene-CCO56_RS13765;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=CCO56_RS13765;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 214950 215924 . + . ID=gene-CCO56_RS13770;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=CCO56_RS13770;old_locus_tag=CCO56_13765 NZ_NPMB01000006.1 Protein Homology CDS 214950 215924 . + 0 ID=cds-WP_001608645.1;Parent=gene-CCO56_RS13770;Dbxref=GenBank:WP_001608645.1;Name=WP_001608645.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=CCO56_RS13770;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_001608645.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 215974 216684 . - . ID=gene-CCO56_RS13775;Name=CCO56_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13775;old_locus_tag=CCO56_13770 NZ_NPMB01000006.1 Protein Homology CDS 215974 216684 . - 0 ID=cds-WP_000190524.1;Parent=gene-CCO56_RS13775;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=CCO56_RS13775;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 217123 217413 . + . ID=gene-CCO56_RS13780;Name=CCO56_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13780;old_locus_tag=CCO56_13775 NZ_NPMB01000006.1 Protein Homology CDS 217123 217413 . + 0 ID=cds-WP_000455790.1;Parent=gene-CCO56_RS13780;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=CCO56_RS13780;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 217701 217913 . + . ID=gene-CCO56_RS13785;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO56_RS13785;old_locus_tag=CCO56_13780 NZ_NPMB01000006.1 Protein Homology CDS 217701 217913 . + 0 ID=cds-WP_000014594.1;Parent=gene-CCO56_RS13785;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=CCO56_RS13785;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 218086 218625 . + . ID=gene-CCO56_RS13790;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=CCO56_RS13790;old_locus_tag=CCO56_13785 NZ_NPMB01000006.1 Protein Homology CDS 218086 218625 . + 0 ID=cds-WP_000047140.1;Parent=gene-CCO56_RS13790;Dbxref=GenBank:WP_000047140.1;Name=WP_000047140.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=CCO56_RS13790;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047140.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 218997 219482 . - . ID=gene-CCO56_RS13795;Name=CCO56_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13795;old_locus_tag=CCO56_13790 NZ_NPMB01000006.1 Protein Homology CDS 218997 219482 . - 0 ID=cds-WP_000533909.1;Parent=gene-CCO56_RS13795;Dbxref=GenBank:WP_000533909.1;Name=WP_000533909.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=CCO56_RS13795;product=GNAT family N-acetyltransferase;protein_id=WP_000533909.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 219470 219757 . - . ID=gene-CCO56_RS13800;Name=CCO56_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13800;old_locus_tag=CCO56_13795 NZ_NPMB01000006.1 Protein Homology CDS 219470 219757 . - 0 ID=cds-WP_000965889.1;Parent=gene-CCO56_RS13800;Dbxref=GenBank:WP_000965889.1;Name=WP_000965889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=CCO56_RS13800;product=DUF1778 domain-containing protein;protein_id=WP_000965889.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 220103 221008 . - . ID=gene-CCO56_RS13805;Name=CCO56_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13805;old_locus_tag=CCO56_13800 NZ_NPMB01000006.1 Protein Homology CDS 220103 221008 . - 0 ID=cds-WP_031567314.1;Parent=gene-CCO56_RS13805;Dbxref=GenBank:WP_031567314.1;Name=WP_031567314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952518.1;locus_tag=CCO56_RS13805;product=hypothetical protein;protein_id=WP_031567314.1;transl_table=11 NZ_NPMB01000006.1 RefSeq pseudogene 221372 221800 . - . ID=gene-CCO56_RS23815;Name=CCO56_RS23815;end_range=221800,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23815;partial=true;pseudo=true NZ_NPMB01000006.1 Protein Homology CDS 221372 221800 . - 0 ID=cds-CCO56_RS23815;Parent=gene-CCO56_RS23815;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;end_range=221800,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=CCO56_RS23815;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 222189 224258 . - . ID=gene-CCO56_RS13815;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=CCO56_RS13815;old_locus_tag=CCO56_13810 NZ_NPMB01000006.1 Protein Homology CDS 222189 224258 . - 0 ID=cds-WP_001291735.1;Parent=gene-CCO56_RS13815;Dbxref=GenBank:WP_001291735.1;Name=WP_001291735.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=CCO56_RS13815;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291735.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 224268 225179 . - . ID=gene-CCO56_RS13820;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=CCO56_RS13820;old_locus_tag=CCO56_13815 NZ_NPMB01000006.1 Protein Homology CDS 224268 225179 . - 0 ID=cds-WP_001168556.1;Parent=gene-CCO56_RS13820;Dbxref=GenBank:WP_001168556.1;Name=WP_001168556.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=CCO56_RS13820;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168556.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 225318 225620 . - . ID=gene-CCO56_RS13825;Name=CCO56_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13825;old_locus_tag=CCO56_13820 NZ_NPMB01000006.1 Protein Homology CDS 225318 225620 . - 0 ID=cds-WP_000605592.1;Parent=gene-CCO56_RS13825;Dbxref=GenBank:WP_000605592.1;Name=WP_000605592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=CCO56_RS13825;product=YsaB family lipoprotein;protein_id=WP_000605592.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 225786 226781 . + . ID=gene-CCO56_RS13835;Name=CCO56_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13835;old_locus_tag=CCO56_13830 NZ_NPMB01000006.1 Protein Homology CDS 225786 226781 . + 0 ID=cds-WP_001182575.1;Parent=gene-CCO56_RS13835;Dbxref=GenBank:WP_001182575.1;Name=WP_001182575.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=CCO56_RS13835;product=acyltransferase;protein_id=WP_001182575.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 226802 227155 . - . ID=gene-CCO56_RS13840;Name=CCO56_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13840;old_locus_tag=CCO56_13835 NZ_NPMB01000006.1 Protein Homology CDS 226802 227155 . - 0 ID=cds-WP_000340932.1;Parent=gene-CCO56_RS13840;Dbxref=GenBank:WP_000340932.1;Name=WP_000340932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=CCO56_RS13840;product=YiaA/YiaB family protein;protein_id=WP_000340932.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 227330 228784 . - . ID=gene-CCO56_RS13845;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=CCO56_RS13845;old_locus_tag=CCO56_13840 NZ_NPMB01000006.1 Protein Homology CDS 227330 228784 . - 0 ID=cds-WP_023233425.1;Parent=gene-CCO56_RS13845;Dbxref=GenBank:WP_023233425.1;Name=WP_023233425.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=CCO56_RS13845;product=xylulokinase;protein_id=WP_023233425.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 228884 230206 . - . ID=gene-CCO56_RS13850;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=CCO56_RS13850;old_locus_tag=CCO56_13845 NZ_NPMB01000006.1 Protein Homology CDS 228884 230206 . - 0 ID=cds-WP_094882056.1;Parent=gene-CCO56_RS13850;Dbxref=GenBank:WP_094882056.1;Name=WP_094882056.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=CCO56_RS13850;product=xylose isomerase;protein_id=WP_094882056.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 230569 231747 . + . ID=gene-CCO56_RS13860;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=CCO56_RS13860;old_locus_tag=CCO56_13855 NZ_NPMB01000006.1 Protein Homology CDS 230569 231747 . + 0 ID=cds-WP_000459824.1;Parent=gene-CCO56_RS13860;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=CCO56_RS13860;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 231808 232632 . - . ID=gene-CCO56_RS13865;Name=CCO56_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13865;old_locus_tag=CCO56_13860 NZ_NPMB01000006.1 Protein Homology CDS 231808 232632 . - 0 ID=cds-WP_001562170.1;Parent=gene-CCO56_RS13865;Dbxref=GenBank:WP_001562170.1;Name=WP_001562170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=CCO56_RS13865;product=protein bax;protein_id=WP_001562170.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 232948 234975 . + . ID=gene-CCO56_RS13870;Name=CCO56_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13870;old_locus_tag=CCO56_13865 NZ_NPMB01000006.1 Protein Homology CDS 232948 234975 . + 0 ID=cds-WP_023233426.1;Parent=gene-CCO56_RS13870;Dbxref=GenBank:WP_023233426.1;Name=WP_023233426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=CCO56_RS13870;product=alpha-amylase;protein_id=WP_023233426.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 235150 236400 . + . ID=gene-CCO56_RS13875;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=CCO56_RS13875;old_locus_tag=CCO56_13870 NZ_NPMB01000006.1 Protein Homology CDS 235150 236400 . + 0 ID=cds-WP_000144379.1;Parent=gene-CCO56_RS13875;Dbxref=GenBank:WP_000144379.1;Name=WP_000144379.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=CCO56_RS13875;product=valine--pyruvate transaminase;protein_id=WP_000144379.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 236437 236910 . - . ID=gene-CCO56_RS13880;Name=CCO56_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13880;old_locus_tag=CCO56_13875 NZ_NPMB01000006.1 Protein Homology CDS 236437 236910 . - 0 ID=cds-WP_001078817.1;Parent=gene-CCO56_RS13880;Dbxref=GenBank:WP_001078817.1;Name=WP_001078817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=CCO56_RS13880;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078817.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 237027 237827 . - . ID=gene-CCO56_RS13885;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=CCO56_RS13885;old_locus_tag=CCO56_13880 NZ_NPMB01000006.1 Protein Homology CDS 237027 237827 . - 0 ID=cds-WP_000081338.1;Parent=gene-CCO56_RS13885;Dbxref=GenBank:WP_000081338.1;Name=WP_000081338.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=CCO56_RS13885;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081338.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 238057 239055 . + . ID=gene-CCO56_RS13890;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=CCO56_RS13890;old_locus_tag=CCO56_13885 NZ_NPMB01000006.1 Protein Homology CDS 238057 239055 . + 0 ID=cds-WP_000861183.1;Parent=gene-CCO56_RS13890;Dbxref=GenBank:WP_000861183.1;Name=WP_000861183.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=CCO56_RS13890;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000861183.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 239067 239531 . + . ID=gene-CCO56_RS13895;Name=CCO56_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13895;old_locus_tag=CCO56_13890 NZ_NPMB01000006.1 Protein Homology CDS 239067 239531 . + 0 ID=cds-WP_001646653.1;Parent=gene-CCO56_RS13895;Dbxref=GenBank:WP_001646653.1;Name=WP_001646653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=CCO56_RS13895;product=YhcH/YjgK/YiaL family protein;protein_id=WP_001646653.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 239555 240487 . + . ID=gene-CCO56_RS13900;Name=CCO56_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13900;old_locus_tag=CCO56_13895 NZ_NPMB01000006.1 Protein Homology CDS 239555 240487 . + 0 ID=cds-WP_058111734.1;Parent=gene-CCO56_RS13900;Dbxref=GenBank:WP_058111734.1;Name=WP_058111734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528247.1;locus_tag=CCO56_RS13900;product=DUF4862 family protein;protein_id=WP_058111734.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 240626 241099 . + . ID=gene-CCO56_RS13905;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=CCO56_RS13905;old_locus_tag=CCO56_13900 NZ_NPMB01000006.1 Protein Homology CDS 240626 241099 . + 0 ID=cds-WP_000832313.1;Parent=gene-CCO56_RS13905;Dbxref=GenBank:WP_000832313.1;Name=WP_000832313.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=CCO56_RS13905;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832313.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 241102 242379 . + . ID=gene-CCO56_RS13910;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=CCO56_RS13910;old_locus_tag=CCO56_13905 NZ_NPMB01000006.1 Protein Homology CDS 241102 242379 . + 0 ID=cds-WP_000301822.1;Parent=gene-CCO56_RS13910;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=CCO56_RS13910;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 242391 243377 . + . ID=gene-CCO56_RS13915;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=CCO56_RS13915;old_locus_tag=CCO56_13910 NZ_NPMB01000006.1 Protein Homology CDS 242391 243377 . + 0 ID=cds-WP_000766337.1;Parent=gene-CCO56_RS13915;Dbxref=GenBank:WP_000766337.1;Name=WP_000766337.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=CCO56_RS13915;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766337.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 243381 244877 . + . ID=gene-CCO56_RS13920;Name=CCO56_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13920;old_locus_tag=CCO56_13915 NZ_NPMB01000006.1 Protein Homology CDS 243381 244877 . + 0 ID=cds-WP_080176934.1;Parent=gene-CCO56_RS13920;Dbxref=GenBank:WP_080176934.1;Name=WP_080176934.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=CCO56_RS13920;product=FGGY-family carbohydrate kinase;protein_id=WP_080176934.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 244874 245524 . + . ID=gene-CCO56_RS13925;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO56_RS13925;old_locus_tag=CCO56_13920 NZ_NPMB01000006.1 Protein Homology CDS 244874 245524 . + 0 ID=cds-WP_000089519.1;Parent=gene-CCO56_RS13925;Dbxref=GenBank:WP_000089519.1;Name=WP_000089519.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089526.1;locus_tag=CCO56_RS13925;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089519.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 245529 246389 . + . ID=gene-CCO56_RS13930;Name=CCO56_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13930;old_locus_tag=CCO56_13925 NZ_NPMB01000006.1 Protein Homology CDS 245529 246389 . + 0 ID=cds-WP_023206929.1;Parent=gene-CCO56_RS13930;Dbxref=GenBank:WP_023206929.1;Name=WP_023206929.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=CCO56_RS13930;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_023206929.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 246383 247078 . + . ID=gene-CCO56_RS13935;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO56_RS13935;old_locus_tag=CCO56_13930 NZ_NPMB01000006.1 Protein Homology CDS 246383 247078 . + 0 ID=cds-WP_080176933.1;Parent=gene-CCO56_RS13935;Dbxref=GenBank:WP_080176933.1;Name=WP_080176933.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=CCO56_RS13935;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_080176933.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 247227 248042 . - . ID=gene-CCO56_RS13940;Name=CCO56_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13940;old_locus_tag=CCO56_13935 NZ_NPMB01000006.1 Protein Homology CDS 247227 248042 . - 0 ID=cds-WP_000891808.1;Parent=gene-CCO56_RS13940;Dbxref=GenBank:WP_000891808.1;Name=WP_000891808.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=CCO56_RS13940;product=AraC family transcriptional regulator;protein_id=WP_000891808.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 248306 250261 . + . ID=gene-CCO56_RS13945;Name=CCO56_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13945;old_locus_tag=CCO56_13940 NZ_NPMB01000006.1 Protein Homology CDS 248306 250261 . + 0 ID=cds-WP_080176932.1;Parent=gene-CCO56_RS13945;Dbxref=GenBank:WP_080176932.1;Name=WP_080176932.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=CCO56_RS13945;product=glycoside hydrolase family 127 protein;protein_id=WP_080176932.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 250547 252085 . - . ID=gene-CCO56_RS13950;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=CCO56_RS13950;old_locus_tag=CCO56_13945 NZ_NPMB01000006.1 Protein Homology CDS 250547 252085 . - 0 ID=cds-WP_000183988.1;Parent=gene-CCO56_RS13950;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=CCO56_RS13950;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 252254 253135 . + . ID=gene-CCO56_RS13955;Name=CCO56_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13955;old_locus_tag=CCO56_13950 NZ_NPMB01000006.1 Protein Homology CDS 252254 253135 . + 0 ID=cds-WP_001188271.1;Parent=gene-CCO56_RS13955;Dbxref=GenBank:WP_001188271.1;Name=WP_001188271.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=CCO56_RS13955;product=ROK family protein;protein_id=WP_001188271.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 253207 254358 . - . ID=gene-CCO56_RS13960;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=CCO56_RS13960;old_locus_tag=CCO56_13955 NZ_NPMB01000006.1 Protein Homology CDS 253207 254358 . - 0 ID=cds-WP_000741491.1;Parent=gene-CCO56_RS13960;Dbxref=GenBank:WP_000741491.1;Name=WP_000741491.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026233.1;locus_tag=CCO56_RS13960;product=L-threonine dehydrogenase;protein_id=WP_000741491.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 254544 256394 . - . ID=gene-CCO56_RS13965;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=CCO56_RS13965;old_locus_tag=CCO56_13960 NZ_NPMB01000006.1 Protein Homology CDS 254544 256394 . - 0 ID=cds-WP_023225552.1;Parent=gene-CCO56_RS13965;Dbxref=GenBank:WP_023225552.1;Name=WP_023225552.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=CCO56_RS13965;product=selenocysteine-specific translation elongation factor;protein_id=WP_023225552.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 256391 257782 . - . ID=gene-CCO56_RS13970;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=CCO56_RS13970;old_locus_tag=CCO56_13965 NZ_NPMB01000006.1 Protein Homology CDS 256391 257782 . - 0 ID=cds-WP_000200188.1;Parent=gene-CCO56_RS13970;Dbxref=GenBank:WP_000200188.1;Name=WP_000200188.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=CCO56_RS13970;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000200188.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 257881 258489 . - . ID=gene-CCO56_RS13975;Name=CCO56_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13975;old_locus_tag=CCO56_13970 NZ_NPMB01000006.1 Protein Homology CDS 257881 258489 . - 0 ID=cds-WP_000766675.1;Parent=gene-CCO56_RS13975;Dbxref=GenBank:WP_000766675.1;Name=WP_000766675.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=CCO56_RS13975;product=glutathione S-transferase;protein_id=WP_000766675.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 258965 260881 . + . ID=gene-CCO56_RS13980;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=CCO56_RS13980;old_locus_tag=CCO56_13975 NZ_NPMB01000006.1 Protein Homology CDS 258965 260881 . + 0 ID=cds-WP_000093290.1;Parent=gene-CCO56_RS13980;Dbxref=GenBank:WP_000093290.1;Name=WP_000093290.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=CCO56_RS13980;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093290.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 261102 262250 . + . ID=gene-CCO56_RS13985;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=CCO56_RS13985;old_locus_tag=CCO56_13980 NZ_NPMB01000006.1 Protein Homology CDS 261102 262250 . + 0 ID=cds-WP_000645385.1;Parent=gene-CCO56_RS13985;Dbxref=GenBank:WP_000645385.1;Name=WP_000645385.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=CCO56_RS13985;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645385.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 262247 262837 . + . ID=gene-CCO56_RS13990;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=CCO56_RS13990;old_locus_tag=CCO56_13985 NZ_NPMB01000006.1 Protein Homology CDS 262247 262837 . + 0 ID=cds-WP_080176931.1;Parent=gene-CCO56_RS13990;Dbxref=GenBank:WP_080176931.1;Name=WP_080176931.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=CCO56_RS13990;product=mannitol operon repressor MtlR;protein_id=WP_080176931.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 262847 263056 . - . ID=gene-CCO56_RS13995;Name=CCO56_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS13995;old_locus_tag=CCO56_13990 NZ_NPMB01000006.1 Protein Homology CDS 262847 263056 . - 0 ID=cds-WP_001062558.1;Parent=gene-CCO56_RS13995;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=CCO56_RS13995;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 263347 263709 . + . ID=gene-CCO56_RS14000;Name=CCO56_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14000;old_locus_tag=CCO56_13995 NZ_NPMB01000006.1 Protein Homology CDS 263347 263709 . + 0 ID=cds-WP_000665687.1;Parent=gene-CCO56_RS14000;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=CCO56_RS14000;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 264197 264880 . + . ID=gene-CCO56_RS14010;Name=CCO56_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14010;old_locus_tag=CCO56_14005 NZ_NPMB01000006.1 Protein Homology CDS 264197 264880 . + 0 ID=cds-WP_023212609.1;Parent=gene-CCO56_RS14010;Dbxref=GenBank:WP_023212609.1;Name=WP_023212609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=CCO56_RS14010;product=DUF3251 domain-containing protein;protein_id=WP_023212609.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 264924 269264 . + . ID=gene-CCO56_RS14015;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=CCO56_RS14015;old_locus_tag=CCO56_14010 NZ_NPMB01000006.1 Protein Homology CDS 264924 269264 . + 0 ID=cds-WP_080176930.1;Parent=gene-CCO56_RS14015;Dbxref=GenBank:WP_080176930.1;Name=WP_080176930.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=CCO56_RS14015;product=trimeric autotransporter adhesin SadA;protein_id=WP_080176930.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 269563 271218 . + . ID=gene-CCO56_RS14020;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=CCO56_RS14020;old_locus_tag=CCO56_14015 NZ_NPMB01000006.1 Protein Homology CDS 269563 271218 . + 0 ID=cds-WP_001055308.1;Parent=gene-CCO56_RS14020;Dbxref=GenBank:WP_001055308.1;Name=WP_001055308.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=CCO56_RS14020;product=L-lactate permease;protein_id=WP_001055308.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 271215 271991 . + . ID=gene-CCO56_RS14025;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=CCO56_RS14025;old_locus_tag=CCO56_14020 NZ_NPMB01000006.1 Protein Homology CDS 271215 271991 . + 0 ID=cds-WP_000636700.1;Parent=gene-CCO56_RS14025;Dbxref=GenBank:WP_000636700.1;Name=WP_000636700.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=CCO56_RS14025;product=transcriptional regulator LldR;protein_id=WP_000636700.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 271988 273178 . + . ID=gene-CCO56_RS14030;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=CCO56_RS14030;old_locus_tag=CCO56_14025 NZ_NPMB01000006.1 Protein Homology CDS 271988 273178 . + 0 ID=cds-WP_000586996.1;Parent=gene-CCO56_RS14030;Dbxref=GenBank:WP_000586996.1;Name=WP_000586996.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=CCO56_RS14030;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_000586996.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 273243 273716 . + . ID=gene-CCO56_RS14035;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CCO56_RS14035;old_locus_tag=CCO56_14030 NZ_NPMB01000006.1 Protein Homology CDS 273243 273716 . + 0 ID=cds-WP_000932335.1;Parent=gene-CCO56_RS14035;Dbxref=GenBank:WP_000932335.1;Name=WP_000932335.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=CCO56_RS14035;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932335.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 273899 274720 . - . ID=gene-CCO56_RS14040;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CCO56_RS14040;old_locus_tag=CCO56_14035 NZ_NPMB01000006.1 Protein Homology CDS 273899 274720 . - 0 ID=cds-WP_001112114.1;Parent=gene-CCO56_RS14040;Dbxref=GenBank:WP_001112114.1;Name=WP_001112114.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=CCO56_RS14040;product=serine O-acetyltransferase;protein_id=WP_001112114.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 274798 275817 . - . ID=gene-CCO56_RS14045;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=CCO56_RS14045;old_locus_tag=CCO56_14040 NZ_NPMB01000006.1 Protein Homology CDS 274798 275817 . - 0 ID=cds-WP_001076597.1;Parent=gene-CCO56_RS14045;Dbxref=GenBank:WP_001076597.1;Name=WP_001076597.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=CCO56_RS14045;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076597.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 275817 276284 . - . ID=gene-CCO56_RS14050;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=CCO56_RS14050;old_locus_tag=CCO56_14045 NZ_NPMB01000006.1 Protein Homology CDS 275817 276284 . - 0 ID=cds-WP_000003370.1;Parent=gene-CCO56_RS14050;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=CCO56_RS14050;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 276328 276579 . - . ID=gene-CCO56_RS14055;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=CCO56_RS14055;old_locus_tag=CCO56_14050 NZ_NPMB01000006.1 Protein Homology CDS 276328 276579 . - 0 ID=cds-WP_001273795.1;Parent=gene-CCO56_RS14055;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=CCO56_RS14055;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 276665 277096 . - . ID=gene-CCO56_RS14060;Name=CCO56_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14060;old_locus_tag=CCO56_14055 NZ_NPMB01000006.1 Protein Homology CDS 276665 277096 . - 0 ID=cds-WP_001156179.1;Parent=gene-CCO56_RS14060;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=CCO56_RS14060;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 277344 278888 . + . ID=gene-CCO56_RS14065;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=CCO56_RS14065;old_locus_tag=CCO56_14060 NZ_NPMB01000006.1 Protein Homology CDS 277344 278888 . + 0 ID=cds-WP_000116587.1;Parent=gene-CCO56_RS14065;Dbxref=GenBank:WP_000116587.1;Name=WP_000116587.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=CCO56_RS14065;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116587.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 278922 280181 . + . ID=gene-CCO56_RS14070;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=CCO56_RS14070;old_locus_tag=CCO56_14065 NZ_NPMB01000006.1 Protein Homology CDS 278922 280181 . + 0 ID=cds-WP_230319576.1;Parent=gene-CCO56_RS14070;Dbxref=GenBank:WP_230319576.1;Name=WP_230319576.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=CCO56_RS14070;product=murein hydrolase activator EnvC;protein_id=WP_230319576.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 280185 281147 . + . ID=gene-CCO56_RS14075;Name=CCO56_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14075;old_locus_tag=CCO56_14070 NZ_NPMB01000006.1 Protein Homology CDS 280185 281147 . + 0 ID=cds-WP_001135510.1;Parent=gene-CCO56_RS14075;Dbxref=GenBank:WP_001135510.1;Name=WP_001135510.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=CCO56_RS14075;product=divergent polysaccharide deacetylase family protein;protein_id=WP_001135510.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 281134 282168 . - . ID=gene-CCO56_RS14080;Name=CCO56_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14080;old_locus_tag=CCO56_14075 NZ_NPMB01000006.1 Protein Homology CDS 281134 282168 . - 0 ID=cds-WP_080166893.1;Parent=gene-CCO56_RS14080;Dbxref=GenBank:WP_080166893.1;Name=WP_080166893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=CCO56_RS14080;product=glycosyltransferase;protein_id=WP_080166893.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 282462 283487 . - . ID=gene-CCO56_RS14085;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=CCO56_RS14085;old_locus_tag=CCO56_14080 NZ_NPMB01000006.1 Protein Homology CDS 282462 283487 . - 0 ID=cds-WP_080176929.1;Parent=gene-CCO56_RS14085;Dbxref=GenBank:WP_080176929.1;Name=WP_080176929.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=CCO56_RS14085;product=L-threonine 3-dehydrogenase;protein_id=WP_080176929.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 283497 284693 . - . ID=gene-CCO56_RS14090;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CCO56_RS14090;old_locus_tag=CCO56_14085 NZ_NPMB01000006.1 Protein Homology CDS 283497 284693 . - 0 ID=cds-WP_001213790.1;Parent=gene-CCO56_RS14090;Dbxref=GenBank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=CCO56_RS14090;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 284896 285828 . + . ID=gene-CCO56_RS14095;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=CCO56_RS14095;old_locus_tag=CCO56_14090 NZ_NPMB01000006.1 Protein Homology CDS 284896 285828 . + 0 ID=cds-WP_000587771.1;Parent=gene-CCO56_RS14095;Dbxref=GenBank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=CCO56_RS14095;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 285831 286877 . + . ID=gene-CCO56_RS14100;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=CCO56_RS14100;old_locus_tag=CCO56_14095 NZ_NPMB01000006.1 Protein Homology CDS 285831 286877 . + 0 ID=cds-WP_000699196.1;Parent=gene-CCO56_RS14100;Dbxref=GenBank:WP_000699196.1;Name=WP_000699196.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=CCO56_RS14100;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699196.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 286877 287830 . + . ID=gene-CCO56_RS14105;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=CCO56_RS14105;old_locus_tag=CCO56_14100 NZ_NPMB01000006.1 Protein Homology CDS 286877 287830 . + 0 ID=cds-WP_001221411.1;Parent=gene-CCO56_RS14105;Dbxref=GenBank:WP_001221411.1;Name=WP_001221411.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=CCO56_RS14105;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001221411.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 287870 289084 . + . ID=gene-CCO56_RS14110;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=CCO56_RS14110;old_locus_tag=CCO56_14105 NZ_NPMB01000006.1 Protein Homology CDS 287870 289084 . + 0 ID=cds-WP_000958439.1;Parent=gene-CCO56_RS14110;Dbxref=GenBank:WP_000958439.1;Name=WP_000958439.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=CCO56_RS14110;product=O-antigen ligase RfaL;protein_id=WP_000958439.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 289141 290286 . - . ID=gene-CCO56_RS14115;Name=CCO56_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14115;old_locus_tag=CCO56_14110 NZ_NPMB01000006.1 Protein Homology CDS 289141 290286 . - 0 ID=cds-WP_000591827.1;Parent=gene-CCO56_RS14115;Dbxref=GenBank:WP_000591827.1;Name=WP_000591827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=CCO56_RS14115;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591827.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 290386 291195 . - . ID=gene-CCO56_RS14120;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=CCO56_RS14120;old_locus_tag=CCO56_14115 NZ_NPMB01000006.1 Protein Homology CDS 290386 291195 . - 0 ID=cds-WP_000536020.1;Parent=gene-CCO56_RS14120;Dbxref=GenBank:WP_000536020.1;Name=WP_000536020.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=CCO56_RS14120;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536020.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 291345 292043 . - . ID=gene-CCO56_RS14125;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=CCO56_RS14125;old_locus_tag=CCO56_14120 NZ_NPMB01000006.1 Protein Homology CDS 291345 292043 . - 0 ID=cds-WP_000582812.1;Parent=gene-CCO56_RS14125;Dbxref=GenBank:WP_000582812.1;Name=WP_000582812.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=CCO56_RS14125;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582812.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 292066 293076 . - . ID=gene-CCO56_RS14130;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=CCO56_RS14130;old_locus_tag=CCO56_14125 NZ_NPMB01000006.1 Protein Homology CDS 292066 293076 . - 0 ID=cds-WP_001631303.1;Parent=gene-CCO56_RS14130;Dbxref=GenBank:WP_001631303.1;Name=WP_001631303.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=CCO56_RS14130;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_001631303.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 293094 294107 . - . ID=gene-CCO56_RS14135;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=CCO56_RS14135;old_locus_tag=CCO56_14130 NZ_NPMB01000006.1 Protein Homology CDS 293094 294107 . - 0 ID=cds-WP_000088482.1;Parent=gene-CCO56_RS14135;Dbxref=GenBank:WP_000088482.1;Name=WP_000088482.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=CCO56_RS14135;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088482.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 294113 295192 . - . ID=gene-CCO56_RS14140;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=CCO56_RS14140;old_locus_tag=CCO56_14135 NZ_NPMB01000006.1 Protein Homology CDS 294113 295192 . - 0 ID=cds-WP_000683988.1;Parent=gene-CCO56_RS14140;Dbxref=GenBank:WP_000683988.1;Name=WP_000683988.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=CCO56_RS14140;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_000683988.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 295206 296186 . - . ID=gene-CCO56_RS14145;Name=CCO56_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14145;old_locus_tag=CCO56_14140 NZ_NPMB01000006.1 Protein Homology CDS 295206 296186 . - 0 ID=cds-WP_023214562.1;Parent=gene-CCO56_RS14145;Dbxref=GenBank:WP_023214562.1;Name=WP_023214562.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=CCO56_RS14145;product=glycosyltransferase family 8 protein;protein_id=WP_023214562.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 296242 297039 . - . ID=gene-CCO56_RS14150;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=CCO56_RS14150;old_locus_tag=CCO56_14145 NZ_NPMB01000006.1 Protein Homology CDS 296242 297039 . - 0 ID=cds-WP_000229825.1;Parent=gene-CCO56_RS14150;Dbxref=GenBank:WP_000229825.1;Name=WP_000229825.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=CCO56_RS14150;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229825.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 297032 298156 . - . ID=gene-CCO56_RS14155;Name=CCO56_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14155;old_locus_tag=CCO56_14150 NZ_NPMB01000006.1 Protein Homology CDS 297032 298156 . - 0 ID=cds-WP_001261579.1;Parent=gene-CCO56_RS14155;Dbxref=GenBank:WP_001261579.1;Name=WP_001261579.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=CCO56_RS14155;product=glycosyltransferase family 4 protein;protein_id=WP_001261579.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 298153 299223 . - . ID=gene-CCO56_RS14160;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=CCO56_RS14160;old_locus_tag=CCO56_14155 NZ_NPMB01000006.1 Protein Homology CDS 298153 299223 . - 0 ID=cds-WP_071985502.1;Parent=gene-CCO56_RS14160;Dbxref=GenBank:WP_071985502.1;Name=WP_071985502.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=CCO56_RS14160;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_071985502.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 299632 300909 . + . ID=gene-CCO56_RS14165;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=CCO56_RS14165;old_locus_tag=CCO56_14160 NZ_NPMB01000006.1 Protein Homology CDS 299632 300909 . + 0 ID=cds-WP_080176928.1;Parent=gene-CCO56_RS14165;Dbxref=GenBank:WP_080176928.1;Name=WP_080176928.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=CCO56_RS14165;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_080176928.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 300918 301397 . + . ID=gene-CCO56_RS14170;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CCO56_RS14170;old_locus_tag=CCO56_14165 NZ_NPMB01000006.1 Protein Homology CDS 300918 301397 . + 0 ID=cds-WP_001171884.1;Parent=gene-CCO56_RS14170;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=CCO56_RS14170;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 301425 302234 . - . ID=gene-CCO56_RS14175;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CCO56_RS14175;old_locus_tag=CCO56_14170 NZ_NPMB01000006.1 Protein Homology CDS 301425 302234 . - 0 ID=cds-WP_001114508.1;Parent=gene-CCO56_RS14175;Dbxref=GenBank:WP_001114508.1;Name=WP_001114508.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=CCO56_RS14175;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114508.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 302332 302499 . - . ID=gene-CCO56_RS14180;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CCO56_RS14180;old_locus_tag=CCO56_14175 NZ_NPMB01000006.1 Protein Homology CDS 302332 302499 . - 0 ID=cds-WP_001051798.1;Parent=gene-CCO56_RS14180;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=CCO56_RS14180;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 302520 302756 . - . ID=gene-CCO56_RS14185;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CCO56_RS14185;old_locus_tag=CCO56_14180 NZ_NPMB01000006.1 Protein Homology CDS 302520 302756 . - 0 ID=cds-WP_001519051.1;Parent=gene-CCO56_RS14185;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=CCO56_RS14185;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 302974 303639 . - . ID=gene-CCO56_RS14190;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CCO56_RS14190;old_locus_tag=CCO56_14185 NZ_NPMB01000006.1 Protein Homology CDS 302974 303639 . - 0 ID=cds-WP_000380129.1;Parent=gene-CCO56_RS14190;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=CCO56_RS14190;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 303815 305035 . + . ID=gene-CCO56_RS14195;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CCO56_RS14195;old_locus_tag=CCO56_14190 NZ_NPMB01000006.1 Protein Homology CDS 303815 305035 . + 0 ID=cds-WP_023212619.1;Parent=gene-CCO56_RS14195;Dbxref=GenBank:WP_023212619.1;Name=WP_023212619.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=CCO56_RS14195;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_023212619.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 305013 305471 . + . ID=gene-CCO56_RS14200;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=CCO56_RS14200;old_locus_tag=CCO56_14195 NZ_NPMB01000006.1 Protein Homology CDS 305013 305471 . + 0 ID=cds-WP_000976078.1;Parent=gene-CCO56_RS14200;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=CCO56_RS14200;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 305579 306175 . + . ID=gene-CCO56_RS14205;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=CCO56_RS14205;old_locus_tag=CCO56_14200 NZ_NPMB01000006.1 Protein Homology CDS 305579 306175 . + 0 ID=cds-WP_000818607.1;Parent=gene-CCO56_RS14205;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=CCO56_RS14205;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 306253 306894 . - . ID=gene-CCO56_RS14210;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CCO56_RS14210;old_locus_tag=CCO56_14205 NZ_NPMB01000006.1 Protein Homology CDS 306253 306894 . - 0 ID=cds-WP_000806167.1;Parent=gene-CCO56_RS14210;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=CCO56_RS14210;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 306974 307690 . - . ID=gene-CCO56_RS14215;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=CCO56_RS14215;old_locus_tag=CCO56_14210 NZ_NPMB01000006.1 Protein Homology CDS 306974 307690 . - 0 ID=cds-WP_001247078.1;Parent=gene-CCO56_RS14215;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=CCO56_RS14215;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 307816 308679 . + . ID=gene-CCO56_RS14225;Name=CCO56_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14225;old_locus_tag=CCO56_14220 NZ_NPMB01000006.1 Protein Homology CDS 307816 308679 . + 0 ID=cds-WP_000621347.1;Parent=gene-CCO56_RS14225;Dbxref=GenBank:WP_000621347.1;Name=WP_000621347.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=CCO56_RS14225;product=YicC/YloC family endoribonuclease;protein_id=WP_000621347.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 308729 309631 . - . ID=gene-CCO56_RS14230;Name=CCO56_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14230;old_locus_tag=CCO56_14225 NZ_NPMB01000006.1 Protein Homology CDS 308729 309631 . - 0 ID=cds-WP_023212620.1;Parent=gene-CCO56_RS14230;Dbxref=GenBank:WP_023212620.1;Name=WP_023212620.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=CCO56_RS14230;product=LysR family transcriptional regulator;protein_id=WP_023212620.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 309705 310586 . + . ID=gene-CCO56_RS14235;Name=CCO56_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14235;old_locus_tag=CCO56_14230 NZ_NPMB01000006.1 Protein Homology CDS 309705 310586 . + 0 ID=cds-WP_001082970.1;Parent=gene-CCO56_RS14235;Dbxref=GenBank:WP_001082970.1;Name=WP_001082970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=CCO56_RS14235;product=HARLDQ motif MBL-fold protein;protein_id=WP_001082970.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 310837 311454 . + . ID=gene-CCO56_RS14240;Name=CCO56_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14240;old_locus_tag=CCO56_14235 NZ_NPMB01000006.1 Protein Homology CDS 310837 311454 . + 0 ID=cds-WP_000924334.1;Parent=gene-CCO56_RS14240;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=CCO56_RS14240;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 311451 313136 . - . ID=gene-CCO56_RS14245;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=CCO56_RS14245;old_locus_tag=CCO56_14240 NZ_NPMB01000006.1 Protein Homology CDS 311451 313136 . - 0 ID=cds-WP_001241828.1;Parent=gene-CCO56_RS14245;Dbxref=GenBank:WP_001241828.1;Name=WP_001241828.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=CCO56_RS14245;product=NAD-dependent DNA ligase LigB;protein_id=WP_001241828.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 313393 314016 . + . ID=gene-CCO56_RS14250;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CCO56_RS14250;old_locus_tag=CCO56_14245 NZ_NPMB01000006.1 Protein Homology CDS 313393 314016 . + 0 ID=cds-WP_000046966.1;Parent=gene-CCO56_RS14250;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=CCO56_RS14250;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 314071 314346 . + . ID=gene-CCO56_RS14255;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CCO56_RS14255;old_locus_tag=CCO56_14250 NZ_NPMB01000006.1 Protein Homology CDS 314071 314346 . + 0 ID=cds-WP_000135058.1;Parent=gene-CCO56_RS14255;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=CCO56_RS14255;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 314365 316476 . + . ID=gene-CCO56_RS14260;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=CCO56_RS14260;old_locus_tag=CCO56_14255 NZ_NPMB01000006.1 Protein Homology CDS 314365 316476 . + 0 ID=cds-WP_000280481.1;Parent=gene-CCO56_RS14260;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=CCO56_RS14260;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 316481 317170 . + . ID=gene-CCO56_RS14265;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=CCO56_RS14265;old_locus_tag=CCO56_14260 NZ_NPMB01000006.1 Protein Homology CDS 316481 317170 . + 0 ID=cds-WP_001068436.1;Parent=gene-CCO56_RS14265;Dbxref=GenBank:WP_001068436.1;Name=WP_001068436.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=CCO56_RS14265;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068436.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 317176 319257 . + . ID=gene-CCO56_RS14270;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CCO56_RS14270;old_locus_tag=CCO56_14265 NZ_NPMB01000006.1 Protein Homology CDS 317176 319257 . + 0 ID=cds-WP_080176927.1;Parent=gene-CCO56_RS14270;Dbxref=GenBank:WP_080176927.1;Name=WP_080176927.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=CCO56_RS14270;product=ATP-dependent DNA helicase RecG;protein_id=WP_080176927.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 319293 320498 . - . ID=gene-CCO56_RS14275;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CCO56_RS14275;old_locus_tag=CCO56_14270 NZ_NPMB01000006.1 Protein Homology CDS 319293 320498 . - 0 ID=cds-WP_000462249.1;Parent=gene-CCO56_RS14275;Dbxref=GenBank:WP_000462249.1;Name=WP_000462249.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=CCO56_RS14275;product=sodium/glutamate symporter;protein_id=WP_000462249.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 320727 322118 . + . ID=gene-CCO56_RS14280;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=CCO56_RS14280;old_locus_tag=CCO56_14275 NZ_NPMB01000006.1 Protein Homology CDS 320727 322118 . + 0 ID=cds-WP_080176926.1;Parent=gene-CCO56_RS14280;Dbxref=GenBank:WP_080176926.1;Name=WP_080176926.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=CCO56_RS14280;product=xanthine/proton symporter XanP;protein_id=WP_080176926.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 322239 323948 . + . ID=gene-CCO56_RS14285;Name=CCO56_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14285;old_locus_tag=CCO56_14280 NZ_NPMB01000006.1 Protein Homology CDS 322239 323948 . + 0 ID=cds-WP_080176925.1;Parent=gene-CCO56_RS14285;Dbxref=GenBank:WP_080176925.1;Name=WP_080176925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=CCO56_RS14285;product=AsmA family protein;protein_id=WP_080176925.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 324051 326369 . - . ID=gene-CCO56_RS14290;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=CCO56_RS14290;old_locus_tag=CCO56_14285 NZ_NPMB01000006.1 Protein Homology CDS 324051 326369 . - 0 ID=cds-WP_080176924.1;Parent=gene-CCO56_RS14290;Dbxref=GenBank:WP_080176924.1;Name=WP_080176924.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=CCO56_RS14290;product=alpha-xylosidase;protein_id=WP_080176924.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 326381 327763 . - . ID=gene-CCO56_RS14295;Name=CCO56_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14295;old_locus_tag=CCO56_14290 NZ_NPMB01000006.1 Protein Homology CDS 326381 327763 . - 0 ID=cds-WP_000834259.1;Parent=gene-CCO56_RS14295;Dbxref=GenBank:WP_000834259.1;Name=WP_000834259.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=CCO56_RS14295;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834259.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 328051 328145 . + . ID=gene-CCO56_RS14300;Name=CCO56_RS14300;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS14300;old_locus_tag=CCO56_14295 NZ_NPMB01000006.1 tRNAscan-SE tRNA 328051 328145 . + . ID=rna-CCO56_RS14300;Parent=gene-CCO56_RS14300;anticodon=(pos:328085..328087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS14300;product=tRNA-Sec NZ_NPMB01000006.1 tRNAscan-SE exon 328051 328145 . + . ID=exon-CCO56_RS14300-1;Parent=rna-CCO56_RS14300;anticodon=(pos:328085..328087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS14300;product=tRNA-Sec NZ_NPMB01000006.1 RefSeq pseudogene 328181 328521 . - . ID=gene-CCO56_RS14305;Name=CCO56_RS14305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS14305;old_locus_tag=CCO56_14300;partial=true;pseudo=true;start_range=.,328181 NZ_NPMB01000006.1 Protein Homology CDS 328181 328521 . - 0 ID=cds-CCO56_RS14305;Parent=gene-CCO56_RS14305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611920.1;locus_tag=CCO56_RS14305;partial=true;product=transposase;pseudo=true;start_range=.,328181;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 328901 329032 . + . ID=gene-CCO56_RS23395;Name=CCO56_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23395 NZ_NPMB01000006.1 GeneMarkS-2+ CDS 328901 329032 . + 0 ID=cds-WP_000548510.1;Parent=gene-CCO56_RS23395;Dbxref=GenBank:WP_000548510.1;Name=WP_000548510.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS23395;product=transposase;protein_id=WP_000548510.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 329767 330384 . + . ID=gene-CCO56_RS14310;Name=CCO56_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14310;old_locus_tag=CCO56_14305 NZ_NPMB01000006.1 Protein Homology CDS 329767 330384 . + 0 ID=cds-WP_000984808.1;Parent=gene-CCO56_RS14310;Dbxref=GenBank:WP_000984808.1;Name=WP_000984808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=CCO56_RS14310;product=transcriptional regulator;protein_id=WP_000984808.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 330459 333326 . + . ID=gene-CCO56_RS14315;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=CCO56_RS14315;old_locus_tag=CCO56_14310 NZ_NPMB01000006.1 Protein Homology CDS 330459 333326 . + 0 ID=cds-WP_080176923.1;Parent=gene-CCO56_RS14315;Dbxref=GenBank:WP_080176923.1;Name=WP_080176923.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=CCO56_RS14315;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_080176923.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 333421 333885 . - . ID=gene-CCO56_RS14320;Name=CCO56_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14320;old_locus_tag=CCO56_14315 NZ_NPMB01000006.1 Protein Homology CDS 333421 333885 . - 0 ID=cds-WP_023213975.1;Parent=gene-CCO56_RS14320;Dbxref=GenBank:WP_023213975.1;Name=WP_023213975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=CCO56_RS14320;product=hypothetical protein;protein_id=WP_023213975.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 333896 334753 . - . ID=gene-CCO56_RS14325;Name=CCO56_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14325;old_locus_tag=CCO56_14320 NZ_NPMB01000006.1 Protein Homology CDS 333896 334753 . - 0 ID=cds-WP_001278063.1;Parent=gene-CCO56_RS14325;Dbxref=GenBank:WP_001278063.1;Name=WP_001278063.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=CCO56_RS14325;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001278063.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 335539 336219 . + . ID=gene-CCO56_RS14335;Name=CCO56_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14335;old_locus_tag=CCO56_14330 NZ_NPMB01000006.1 Protein Homology CDS 335539 336219 . + 0 ID=cds-WP_000106461.1;Parent=gene-CCO56_RS14335;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=CCO56_RS14335;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 336387 336866 . - . ID=gene-CCO56_RS14345;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=CCO56_RS14345;old_locus_tag=CCO56_14340 NZ_NPMB01000006.1 Protein Homology CDS 336387 336866 . - 0 ID=cds-WP_023197164.1;Parent=gene-CCO56_RS14345;Dbxref=GenBank:WP_023197164.1;Name=WP_023197164.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=CCO56_RS14345;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_023197164.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 336968 337054 . - . ID=gene-CCO56_RS23975;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=CCO56_RS23975 NZ_NPMB01000006.1 Protein Homology CDS 336968 337054 . - 0 ID=cds-WP_252515021.1;Parent=gene-CCO56_RS23975;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=CCO56_RS23975;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 337067 337159 . - . ID=gene-CCO56_RS14350;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=CCO56_RS14350;old_locus_tag=CCO56_14345 NZ_NPMB01000006.1 Protein Homology CDS 337067 337159 . - 0 ID=cds-WP_001082118.1;Parent=gene-CCO56_RS14350;Dbxref=GenBank:WP_001082118.1;Name=WP_001082118.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082119.1;locus_tag=CCO56_RS14350;product=protein MgtR;protein_id=WP_001082118.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 337181 339907 . - . ID=gene-CCO56_RS14355;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO56_RS14355;old_locus_tag=CCO56_14350 NZ_NPMB01000006.1 Protein Homology CDS 337181 339907 . - 0 ID=cds-WP_000131275.1;Parent=gene-CCO56_RS14355;Dbxref=GenBank:WP_000131275.1;Name=WP_000131275.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=CCO56_RS14355;product=magnesium-translocating P-type ATPase;protein_id=WP_000131275.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 340125 340820 . - . ID=gene-CCO56_RS14360;Name=CCO56_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14360;old_locus_tag=CCO56_14355 NZ_NPMB01000006.1 Protein Homology CDS 340125 340820 . - 0 ID=cds-WP_000392700.1;Parent=gene-CCO56_RS14360;Dbxref=GenBank:WP_000392700.1;Name=WP_000392700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=CCO56_RS14360;product=MgtC family protein;protein_id=WP_000392700.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 341327 342229 . + . ID=gene-CCO56_RS14365;Name=CCO56_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14365;old_locus_tag=CCO56_14360 NZ_NPMB01000006.1 Protein Homology CDS 341327 342229 . + 0 ID=cds-WP_023206754.1;Parent=gene-CCO56_RS14365;Dbxref=GenBank:WP_023206754.1;Name=WP_023206754.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=CCO56_RS14365;product=EamA family transporter;protein_id=WP_023206754.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 342272 343213 . - . ID=gene-CCO56_RS14370;Name=CCO56_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14370;old_locus_tag=CCO56_14365 NZ_NPMB01000006.1 Protein Homology CDS 342272 343213 . - 0 ID=cds-WP_080177090.1;Parent=gene-CCO56_RS14370;Dbxref=GenBank:WP_080177090.1;Name=WP_080177090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=CCO56_RS14370;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_080177090.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 343449 344192 . - . ID=gene-CCO56_RS14375;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO56_RS14375;old_locus_tag=CCO56_14370 NZ_NPMB01000006.1 Protein Homology CDS 343449 344192 . - 0 ID=cds-WP_001186149.1;Parent=gene-CCO56_RS14375;Dbxref=GenBank:WP_001186149.1;Name=WP_001186149.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=CCO56_RS14375;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186149.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 344179 345288 . - . ID=gene-CCO56_RS14380;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=CCO56_RS14380;old_locus_tag=CCO56_14375 NZ_NPMB01000006.1 Protein Homology CDS 344179 345288 . - 0 ID=cds-WP_079982161.1;Parent=gene-CCO56_RS14380;Dbxref=GenBank:WP_079982161.1;Name=WP_079982161.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=CCO56_RS14380;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_079982161.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 345292 346152 . - . ID=gene-CCO56_RS14385;Name=CCO56_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14385;old_locus_tag=CCO56_14380 NZ_NPMB01000006.1 Protein Homology CDS 345292 346152 . - 0 ID=cds-WP_001526325.1;Parent=gene-CCO56_RS14385;Dbxref=GenBank:WP_001526325.1;Name=WP_001526325.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=CCO56_RS14385;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001526325.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 346149 346898 . - . ID=gene-CCO56_RS14390;Name=CCO56_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14390;old_locus_tag=CCO56_14385 NZ_NPMB01000006.1 Protein Homology CDS 346149 346898 . - 0 ID=cds-WP_000380259.1;Parent=gene-CCO56_RS14390;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=CCO56_RS14390;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 347044 347529 . - . ID=gene-CCO56_RS14395;Name=CCO56_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14395;old_locus_tag=CCO56_14390 NZ_NPMB01000006.1 Protein Homology CDS 347044 347529 . - 0 ID=cds-WP_001284295.1;Parent=gene-CCO56_RS14395;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=CCO56_RS14395;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 347540 347965 . - . ID=gene-CCO56_RS14400;Name=CCO56_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14400;old_locus_tag=CCO56_14395 NZ_NPMB01000006.1 Protein Homology CDS 347540 347965 . - 0 ID=cds-WP_000214106.1;Parent=gene-CCO56_RS14400;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=CCO56_RS14400;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 348184 350982 . - . ID=gene-CCO56_RS14410;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=CCO56_RS14410;old_locus_tag=CCO56_14405 NZ_NPMB01000006.1 Protein Homology CDS 348184 350982 . - 0 ID=cds-WP_080177092.1;Parent=gene-CCO56_RS14410;Dbxref=GenBank:WP_080177092.1;Name=WP_080177092.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=CCO56_RS14410;product=transcriptional regulator DagR;protein_id=WP_080177092.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 351179 351472 . + . ID=gene-CCO56_RS14415;Name=CCO56_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14415;old_locus_tag=CCO56_14410 NZ_NPMB01000006.1 Protein Homology CDS 351179 351472 . + 0 ID=cds-WP_000824214.1;Parent=gene-CCO56_RS14415;Dbxref=GenBank:WP_000824214.1;Name=WP_000824214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=CCO56_RS14415;product=YicS family protein;protein_id=WP_000824214.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 351578 352960 . + . ID=gene-CCO56_RS14420;Name=CCO56_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14420;old_locus_tag=CCO56_14415 NZ_NPMB01000006.1 Protein Homology CDS 351578 352960 . + 0 ID=cds-WP_080177093.1;Parent=gene-CCO56_RS14420;Dbxref=GenBank:WP_080177093.1;Name=WP_080177093.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=CCO56_RS14420;product=glycoside hydrolase family 1 protein;protein_id=WP_080177093.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 353020 354213 . - . ID=gene-CCO56_RS14425;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=CCO56_RS14425;old_locus_tag=CCO56_14420 NZ_NPMB01000006.1 Protein Homology CDS 353020 354213 . - 0 ID=cds-WP_061377038.1;Parent=gene-CCO56_RS14425;Dbxref=GenBank:WP_061377038.1;Name=WP_061377038.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=CCO56_RS14425;product=purine ribonucleoside efflux pump NepI;protein_id=WP_061377038.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 354429 354788 . + . ID=gene-CCO56_RS14430;Name=CCO56_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14430;old_locus_tag=CCO56_14425 NZ_NPMB01000006.1 Protein Homology CDS 354429 354788 . + 0 ID=cds-WP_001217953.1;Parent=gene-CCO56_RS14430;Dbxref=GenBank:WP_001217953.1;Name=WP_001217953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=CCO56_RS14430;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217953.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 354772 355095 . + . ID=gene-CCO56_RS14435;Name=CCO56_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14435;old_locus_tag=CCO56_14430 NZ_NPMB01000006.1 Protein Homology CDS 354772 355095 . + 0 ID=cds-WP_001274837.1;Parent=gene-CCO56_RS14435;Dbxref=GenBank:WP_001274837.1;Name=WP_001274837.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=CCO56_RS14435;product=helix-turn-helix domain-containing protein;protein_id=WP_001274837.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 355186 355455 . - . ID=gene-CCO56_RS14440;Name=CCO56_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14440;old_locus_tag=CCO56_14435 NZ_NPMB01000006.1 Protein Homology CDS 355186 355455 . - 0 ID=cds-WP_000621026.1;Parent=gene-CCO56_RS14440;Dbxref=GenBank:WP_000621026.1;Name=WP_000621026.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=CCO56_RS14440;product=HPr family phosphocarrier protein;protein_id=WP_000621026.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 355465 356325 . - . ID=gene-CCO56_RS14445;Name=CCO56_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14445;old_locus_tag=CCO56_14440 NZ_NPMB01000006.1 Protein Homology CDS 355465 356325 . - 0 ID=cds-WP_001131798.1;Parent=gene-CCO56_RS14445;Dbxref=GenBank:WP_001131798.1;Name=WP_001131798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=CCO56_RS14445;product=class II aldolase;protein_id=WP_001131798.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 356388 357872 . - . ID=gene-CCO56_RS14450;Name=CCO56_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14450;old_locus_tag=CCO56_14445 NZ_NPMB01000006.1 Protein Homology CDS 356388 357872 . - 0 ID=cds-WP_001113551.1;Parent=gene-CCO56_RS14450;Dbxref=GenBank:WP_001113551.1;Name=WP_001113551.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=CCO56_RS14450;product=FGGY-family carbohydrate kinase;protein_id=WP_001113551.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 357865 359223 . - . ID=gene-CCO56_RS14455;Name=CCO56_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14455;old_locus_tag=CCO56_14450 NZ_NPMB01000006.1 Protein Homology CDS 357865 359223 . - 0 ID=cds-WP_000997827.1;Parent=gene-CCO56_RS14455;Dbxref=GenBank:WP_000997827.1;Name=WP_000997827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=CCO56_RS14455;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997827.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 359300 359587 . - . ID=gene-CCO56_RS14460;Name=CCO56_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14460;old_locus_tag=CCO56_14455 NZ_NPMB01000006.1 Protein Homology CDS 359300 359587 . - 0 ID=cds-WP_000041396.1;Parent=gene-CCO56_RS14460;Dbxref=GenBank:WP_000041396.1;Name=WP_000041396.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=CCO56_RS14460;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 359584 360057 . - . ID=gene-CCO56_RS14465;Name=CCO56_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14465;old_locus_tag=CCO56_14460 NZ_NPMB01000006.1 Protein Homology CDS 359584 360057 . - 0 ID=cds-WP_001152237.1;Parent=gene-CCO56_RS14465;Dbxref=GenBank:WP_001152237.1;Name=WP_001152237.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=CCO56_RS14465;product=PTS sugar transporter subunit IIA;protein_id=WP_001152237.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 360075 360818 . - . ID=gene-CCO56_RS14470;Name=CCO56_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14470;old_locus_tag=CCO56_14465 NZ_NPMB01000006.1 Protein Homology CDS 360075 360818 . - 0 ID=cds-WP_080177094.1;Parent=gene-CCO56_RS14470;Dbxref=GenBank:WP_080177094.1;Name=WP_080177094.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=CCO56_RS14470;product=GntR family transcriptional regulator;protein_id=WP_080177094.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 361171 361623 . - . ID=gene-CCO56_RS14475;Name=CCO56_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14475;old_locus_tag=CCO56_14470 NZ_NPMB01000006.1 Protein Homology CDS 361171 361623 . - 0 ID=cds-WP_001519640.1;Parent=gene-CCO56_RS14475;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=CCO56_RS14475;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 361816 363207 . - . ID=gene-CCO56_RS14480;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CCO56_RS14480;old_locus_tag=CCO56_14475 NZ_NPMB01000006.1 Protein Homology CDS 361816 363207 . - 0 ID=cds-WP_000879181.1;Parent=gene-CCO56_RS14480;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=CCO56_RS14480;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879181.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 363350 364678 . - . ID=gene-CCO56_RS14485;Name=CCO56_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14485;old_locus_tag=CCO56_14480 NZ_NPMB01000006.1 Protein Homology CDS 363350 364678 . - 0 ID=cds-WP_000948174.1;Parent=gene-CCO56_RS14485;Dbxref=GenBank:WP_000948174.1;Name=WP_000948174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=CCO56_RS14485;product=MFS transporter;protein_id=WP_000948174.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 364688 366190 . - . ID=gene-CCO56_RS14490;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=CCO56_RS14490;old_locus_tag=CCO56_14485 NZ_NPMB01000006.1 Protein Homology CDS 364688 366190 . - 0 ID=cds-WP_001091263.1;Parent=gene-CCO56_RS14490;Dbxref=GenBank:WP_001091263.1;Name=WP_001091263.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=CCO56_RS14490;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001091263.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 366190 366780 . - . ID=gene-CCO56_RS14495;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=CCO56_RS14495;old_locus_tag=CCO56_14490 NZ_NPMB01000006.1 Protein Homology CDS 366190 366780 . - 0 ID=cds-WP_000633672.1;Parent=gene-CCO56_RS14495;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=CCO56_RS14495;product=transcriptional regulator UhpA;protein_id=WP_000633672.1;transl_table=11 NZ_NPMB01000006.1 RefSeq pseudogene 366803 366988 . + . ID=gene-CCO56_RS24165;Name=CCO56_RS24165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24165;partial=true;pseudo=true;start_range=.,366803 NZ_NPMB01000006.1 Protein Homology CDS 366803 366988 . + 0 ID=cds-CCO56_RS24165;Parent=gene-CCO56_RS24165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551692.1;locus_tag=CCO56_RS24165;partial=true;product=hypothetical protein;pseudo=true;start_range=.,366803;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 366934 367947 . - . ID=gene-CCO56_RS14500;Name=CCO56_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14500;old_locus_tag=CCO56_14495 NZ_NPMB01000006.1 Protein Homology CDS 366934 367947 . - 0 ID=cds-WP_000213199.1;Parent=gene-CCO56_RS14500;Dbxref=GenBank:WP_000213199.1;Name=WP_000213199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=CCO56_RS14500;product=aldose 1-epimerase family protein;protein_id=WP_000213199.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 367959 369275 . - . ID=gene-CCO56_RS14505;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO56_RS14505;old_locus_tag=CCO56_14500 NZ_NPMB01000006.1 Protein Homology CDS 367959 369275 . - 0 ID=cds-WP_000998359.1;Parent=gene-CCO56_RS14505;Dbxref=GenBank:WP_000998359.1;Name=WP_000998359.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=CCO56_RS14505;product=L-fucose:H+ symporter permease;protein_id=WP_000998359.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 369306 370226 . - . ID=gene-CCO56_RS14510;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO56_RS14510;old_locus_tag=CCO56_14505 NZ_NPMB01000006.1 Protein Homology CDS 369306 370226 . - 0 ID=cds-WP_000350272.1;Parent=gene-CCO56_RS14510;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=CCO56_RS14510;product=ribokinase;protein_id=WP_000350272.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 370551 371336 . + . ID=gene-CCO56_RS14515;Name=CCO56_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14515;old_locus_tag=CCO56_14510 NZ_NPMB01000006.1 Protein Homology CDS 370551 371336 . + 0 ID=cds-WP_000448642.1;Parent=gene-CCO56_RS14515;Dbxref=GenBank:WP_000448642.1;Name=WP_000448642.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=CCO56_RS14515;product=DeoR family transcriptional regulator;protein_id=WP_000448642.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 371338 371628 . - . ID=gene-CCO56_RS14520;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO56_RS14520;old_locus_tag=CCO56_14515 NZ_NPMB01000006.1 Protein Homology CDS 371338 371628 . - 0 ID=cds-WP_001171826.1;Parent=gene-CCO56_RS14520;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=CCO56_RS14520;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 371632 373320 . - . ID=gene-CCO56_RS14525;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CCO56_RS14525;old_locus_tag=CCO56_14520 NZ_NPMB01000006.1 Protein Homology CDS 371632 373320 . - 0 ID=cds-WP_094882057.1;Parent=gene-CCO56_RS14525;Dbxref=GenBank:WP_094882057.1;Name=WP_094882057.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=CCO56_RS14525;product=acetolactate synthase large subunit;protein_id=WP_094882057.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 373427 373525 . - . ID=gene-CCO56_RS14530;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=CCO56_RS14530;old_locus_tag=CCO56_14525 NZ_NPMB01000006.1 Protein Homology CDS 373427 373525 . - 0 ID=cds-WP_001541152.1;Parent=gene-CCO56_RS14530;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=CCO56_RS14530;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_NPMB01000006.1 RefSeq pseudogene 374048 374162 . + . ID=gene-CCO56_RS23400;Name=CCO56_RS23400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23400;pseudo=true NZ_NPMB01000006.1 Protein Homology CDS 374048 374162 . + 0 ID=cds-CCO56_RS23400;Parent=gene-CCO56_RS23400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=CCO56_RS23400;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 374159 374248 . + . ID=gene-CCO56_RS14535;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=CCO56_RS14535;old_locus_tag=CCO56_14530 NZ_NPMB01000006.1 Protein Homology CDS 374159 374248 . + 0 ID=cds-WP_000117642.1;Parent=gene-CCO56_RS14535;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=CCO56_RS14535;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 374341 375201 . + . ID=gene-CCO56_RS14540;Name=CCO56_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14540;old_locus_tag=CCO56_14535 NZ_NPMB01000006.1 Protein Homology CDS 374341 375201 . + 0 ID=cds-WP_080177096.1;Parent=gene-CCO56_RS14540;Dbxref=GenBank:WP_080177096.1;Name=WP_080177096.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=CCO56_RS14540;product=DMT family transporter;protein_id=WP_080177096.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 375404 376588 . + . ID=gene-CCO56_RS14545;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=CCO56_RS14545;old_locus_tag=CCO56_14540 NZ_NPMB01000006.1 Protein Homology CDS 375404 376588 . + 0 ID=cds-WP_000828737.1;Parent=gene-CCO56_RS14545;Dbxref=GenBank:WP_000828737.1;Name=WP_000828737.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=CCO56_RS14545;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828737.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 376515 377600 . - . ID=gene-CCO56_RS14550;Name=CCO56_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14550;old_locus_tag=CCO56_14545 NZ_NPMB01000006.1 Protein Homology CDS 376515 377600 . - 0 ID=cds-WP_000238927.1;Parent=gene-CCO56_RS14550;Dbxref=GenBank:WP_000238927.1;Name=WP_000238927.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=CCO56_RS14550;product=cellulase family glycosylhydrolase;protein_id=WP_000238927.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 377664 378587 . - . ID=gene-CCO56_RS14555;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=CCO56_RS14555;old_locus_tag=CCO56_14550 NZ_NPMB01000006.1 Protein Homology CDS 377664 378587 . - 0 ID=cds-WP_001651066.1;Parent=gene-CCO56_RS14555;Dbxref=GenBank:WP_001651066.1;Name=WP_001651066.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=CCO56_RS14555;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001651066.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 378813 380150 . + . ID=gene-CCO56_RS14560;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=CCO56_RS14560;old_locus_tag=CCO56_14555 NZ_NPMB01000006.1 Protein Homology CDS 378813 380150 . + 0 ID=cds-WP_000543317.1;Parent=gene-CCO56_RS14560;Dbxref=GenBank:WP_000543317.1;Name=WP_000543317.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=CCO56_RS14560;product=D-serine transporter DsdX;protein_id=WP_000543317.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 380168 381490 . + . ID=gene-CCO56_RS14565;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=CCO56_RS14565;old_locus_tag=CCO56_14560 NZ_NPMB01000006.1 Protein Homology CDS 380168 381490 . + 0 ID=cds-WP_079980972.1;Parent=gene-CCO56_RS14565;Dbxref=GenBank:WP_079980972.1;Name=WP_079980972.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=CCO56_RS14565;product=D-serine ammonia-lyase;protein_id=WP_079980972.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 381572 382102 . - . ID=gene-CCO56_RS14570;Name=CCO56_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14570;old_locus_tag=CCO56_14565 NZ_NPMB01000006.1 Protein Homology CDS 381572 382102 . - 0 ID=cds-WP_080177097.1;Parent=gene-CCO56_RS14570;Dbxref=GenBank:WP_080177097.1;Name=WP_080177097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=CCO56_RS14570;product=radical SAM protein;protein_id=WP_080177097.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 382099 382461 . - . ID=gene-CCO56_RS14575;Name=CCO56_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14575;old_locus_tag=CCO56_14570 NZ_NPMB01000006.1 Protein Homology CDS 382099 382461 . - 0 ID=cds-WP_001113454.1;Parent=gene-CCO56_RS14575;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=CCO56_RS14575;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 382451 382798 . - . ID=gene-CCO56_RS14580;Name=CCO56_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14580;old_locus_tag=CCO56_14575 NZ_NPMB01000006.1 Protein Homology CDS 382451 382798 . - 0 ID=cds-WP_000703964.1;Parent=gene-CCO56_RS14580;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=CCO56_RS14580;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 383242 384903 . - . ID=gene-CCO56_RS14585;Name=CCO56_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14585;old_locus_tag=CCO56_14580 NZ_NPMB01000006.1 Protein Homology CDS 383242 384903 . - 0 ID=cds-WP_001279793.1;Parent=gene-CCO56_RS14585;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=CCO56_RS14585;product=putative transporter;protein_id=WP_001279793.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 385092 385520 . - . ID=gene-CCO56_RS14590;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=CCO56_RS14590;old_locus_tag=CCO56_14585 NZ_NPMB01000006.1 Protein Homology CDS 385092 385520 . - 0 ID=cds-WP_001246919.1;Parent=gene-CCO56_RS14590;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=CCO56_RS14590;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 385630 386043 . - . ID=gene-CCO56_RS14595;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=CCO56_RS14595;old_locus_tag=CCO56_14590 NZ_NPMB01000006.1 Protein Homology CDS 385630 386043 . - 0 ID=cds-WP_001532742.1;Parent=gene-CCO56_RS14595;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=CCO56_RS14595;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_NPMB01000006.1 cmsearch sequence_feature 386037 386110 . - . ID=id-NZ_NPMB01000006.1:386037..386110;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMB01000006.1 RefSeq gene 386353 386685 . + . ID=gene-CCO56_RS14600;Name=CCO56_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14600;old_locus_tag=CCO56_14595 NZ_NPMB01000006.1 Protein Homology CDS 386353 386685 . + 0 ID=cds-WP_001543704.1;Parent=gene-CCO56_RS14600;Dbxref=GenBank:WP_001543704.1;Name=WP_001543704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=CCO56_RS14600;product=YceK/YidQ family lipoprotein;protein_id=WP_001543704.1;transl_table=11 NZ_NPMB01000006.1 RefSeq gene 386687 387913 . - . ID=gene-CCO56_RS14605;Name=CCO56_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14605;old_locus_tag=CCO56_14600 NZ_NPMB01000006.1 Protein Homology CDS 386687 387913 . - 0 ID=cds-WP_080177098.1;Parent=gene-CCO56_RS14605;Dbxref=GenBank:WP_080177098.1;Name=WP_080177098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=CCO56_RS14605;product=DUF3748 domain-containing protein;protein_id=WP_080177098.1;transl_table=11 NZ_NPMB01000006.1 RefSeq pseudogene 388035 388120 . - . ID=gene-CCO56_RS23820;Name=CCO56_RS23820;end_range=388120,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23820;partial=true;pseudo=true NZ_NPMB01000006.1 Protein Homology CDS 388035 388120 . - 2 ID=cds-CCO56_RS23820;Parent=gene-CCO56_RS23820;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=388120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=CCO56_RS23820;partial=true;product=heme lyase subunit;pseudo=true;transl_table=11 ##sequence-region NZ_NPMB01000007.1 1 357566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000007.1 RefSeq region 1 357566 . + . ID=NZ_NPMB01000007.1:1..357566;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000007.1 RefSeq gene 1 353 . + . ID=gene-CCO56_RS14610;Name=CCO56_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14610;old_locus_tag=CCO56_14605;partial=true;start_range=.,1 NZ_NPMB01000007.1 Protein Homology CDS 1 353 . + 2 ID=cds-WP_094882058.1;Parent=gene-CCO56_RS14610;Dbxref=GenBank:WP_094882058.1;Name=WP_094882058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO56_RS14610;partial=true;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_094882058.1;start_range=.,1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 355 1212 . + . ID=gene-CCO56_RS14615;Name=CCO56_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14615;old_locus_tag=CCO56_14610 NZ_NPMB01000007.1 Protein Homology CDS 355 1212 . + 0 ID=cds-WP_000534706.1;Parent=gene-CCO56_RS14615;Dbxref=GenBank:WP_000534706.1;Name=WP_000534706.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=CCO56_RS14615;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534706.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 1255 1869 . + . ID=gene-CCO56_RS14620;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=CCO56_RS14620;old_locus_tag=CCO56_14615 NZ_NPMB01000007.1 Protein Homology CDS 1255 1869 . + 0 ID=cds-WP_000206565.1;Parent=gene-CCO56_RS14620;Dbxref=GenBank:WP_000206565.1;Name=WP_000206565.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=CCO56_RS14620;product=Tat proofreading chaperone DmsD;protein_id=WP_000206565.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 2174 2884 . + . ID=gene-CCO56_RS14625;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO56_RS14625;old_locus_tag=CCO56_14620 NZ_NPMB01000007.1 Protein Homology CDS 2174 2884 . + 0 ID=cds-WP_000557304.1;Parent=gene-CCO56_RS14625;Dbxref=GenBank:WP_000557304.1;Name=WP_000557304.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=CCO56_RS14625;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000557304.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 2913 3815 . + . ID=gene-CCO56_RS14630;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=CCO56_RS14630;old_locus_tag=CCO56_14625 NZ_NPMB01000007.1 Protein Homology CDS 2913 3815 . + 0 ID=cds-WP_001211193.1;Parent=gene-CCO56_RS14630;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=CCO56_RS14630;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 3825 4472 . + . ID=gene-CCO56_RS14635;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=CCO56_RS14635;old_locus_tag=CCO56_14630 NZ_NPMB01000007.1 Protein Homology CDS 3825 4472 . + 0 ID=cds-WP_000379677.1;Parent=gene-CCO56_RS14635;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=CCO56_RS14635;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 4472 5620 . + . ID=gene-CCO56_RS14640;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=CCO56_RS14640;old_locus_tag=CCO56_14635 NZ_NPMB01000007.1 Protein Homology CDS 4472 5620 . + 0 ID=cds-WP_000593089.1;Parent=gene-CCO56_RS14640;Dbxref=GenBank:WP_000593089.1;Name=WP_000593089.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=CCO56_RS14640;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593089.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 5756 7045 . + . ID=gene-CCO56_RS14645;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=CCO56_RS14645;old_locus_tag=CCO56_14640 NZ_NPMB01000007.1 Protein Homology CDS 5756 7045 . + 0 ID=cds-WP_023972164.1;Parent=gene-CCO56_RS14645;Dbxref=GenBank:WP_023972164.1;Name=WP_023972164.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=CCO56_RS14645;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_023972164.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 7001 7696 . - . ID=gene-CCO56_RS14650;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO56_RS14650;old_locus_tag=CCO56_14645 NZ_NPMB01000007.1 Protein Homology CDS 7001 7696 . - 0 ID=cds-WP_000919210.1;Parent=gene-CCO56_RS14650;Dbxref=GenBank:WP_000919210.1;Name=WP_000919210.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=CCO56_RS14650;product=dethiobiotin synthase;protein_id=WP_000919210.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 7822 9042 . - . ID=gene-CCO56_RS14655;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=CCO56_RS14655;old_locus_tag=CCO56_14650 NZ_NPMB01000007.1 Protein Homology CDS 7822 9042 . - 0 ID=cds-WP_000225094.1;Parent=gene-CCO56_RS14655;Dbxref=GenBank:WP_000225094.1;Name=WP_000225094.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=CCO56_RS14655;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225094.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 9170 10069 . - . ID=gene-CCO56_RS14665;Name=CCO56_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14665;old_locus_tag=CCO56_14660 NZ_NPMB01000007.1 Protein Homology CDS 9170 10069 . - 0 ID=cds-WP_001019577.1;Parent=gene-CCO56_RS14665;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=CCO56_RS14665;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 10189 11442 . + . ID=gene-CCO56_RS14670;Name=CCO56_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14670;old_locus_tag=CCO56_14665 NZ_NPMB01000007.1 Protein Homology CDS 10189 11442 . + 0 ID=cds-WP_000091786.1;Parent=gene-CCO56_RS14670;Dbxref=GenBank:WP_000091786.1;Name=WP_000091786.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=CCO56_RS14670;product=MFS transporter;protein_id=WP_000091786.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 11509 11601 . - . ID=gene-CCO56_RS23825;Name=CCO56_RS23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23825 NZ_NPMB01000007.1 Protein Homology CDS 11509 11601 . - 0 ID=cds-WP_001068154.1;Parent=gene-CCO56_RS23825;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=CCO56_RS23825;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 11837 12085 . + . ID=gene-CCO56_RS14675;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=CCO56_RS14675;old_locus_tag=CCO56_14670 NZ_NPMB01000007.1 Protein Homology CDS 11837 12085 . + 0 ID=cds-WP_000756317.1;Parent=gene-CCO56_RS14675;Dbxref=GenBank:WP_000756317.1;Name=WP_000756317.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=CCO56_RS14675;product=acid resistance repetitive basic protein Asr;protein_id=WP_000756317.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 12354 13175 . + . ID=gene-CCO56_RS14685;Name=CCO56_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14685;old_locus_tag=CCO56_14680 NZ_NPMB01000007.1 Protein Homology CDS 12354 13175 . + 0 ID=cds-WP_000549638.1;Parent=gene-CCO56_RS14685;Dbxref=GenBank:WP_000549638.1;Name=WP_000549638.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=CCO56_RS14685;product=trypsin-like serine peptidase;protein_id=WP_000549638.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 13210 13539 . - . ID=gene-CCO56_RS14690;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=CCO56_RS14690;old_locus_tag=CCO56_14685 NZ_NPMB01000007.1 Protein Homology CDS 13210 13539 . - 0 ID=cds-WP_001183821.1;Parent=gene-CCO56_RS14690;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=CCO56_RS14690;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 13526 13888 . - . ID=gene-CCO56_RS14695;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=CCO56_RS14695;old_locus_tag=CCO56_14690 NZ_NPMB01000007.1 Protein Homology CDS 13526 13888 . - 0 ID=cds-WP_000500278.1;Parent=gene-CCO56_RS14695;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=CCO56_RS14695;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 14000 14170 . - . ID=gene-CCO56_RS24170;Name=CCO56_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24170;old_locus_tag=CCO56_14695 NZ_NPMB01000007.1 Protein Homology CDS 14000 14170 . - 0 ID=cds-WP_001539987.1;Parent=gene-CCO56_RS24170;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=CCO56_RS24170;product=hypothetical protein;protein_id=WP_001539987.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 14306 15340 . + . ID=gene-CCO56_RS14705;Name=CCO56_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14705;old_locus_tag=CCO56_14700 NZ_NPMB01000007.1 Protein Homology CDS 14306 15340 . + 0 ID=cds-WP_001118268.1;Parent=gene-CCO56_RS14705;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=CCO56_RS14705;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 15515 16903 . - . ID=gene-CCO56_RS14710;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=CCO56_RS14710;old_locus_tag=CCO56_14705 NZ_NPMB01000007.1 Protein Homology CDS 15515 16903 . - 0 ID=cds-WP_000014056.1;Parent=gene-CCO56_RS14710;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=CCO56_RS14710;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 16914 18443 . - . ID=gene-CCO56_RS14715;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=CCO56_RS14715;old_locus_tag=CCO56_14710 NZ_NPMB01000007.1 Protein Homology CDS 16914 18443 . - 0 ID=cds-WP_001219356.1;Parent=gene-CCO56_RS14715;Dbxref=GenBank:WP_001219356.1;Name=WP_001219356.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=CCO56_RS14715;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219356.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 18970 19914 . + . ID=gene-CCO56_RS14720;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=CCO56_RS14720;old_locus_tag=CCO56_14715 NZ_NPMB01000007.1 Protein Homology CDS 18970 19914 . + 0 ID=cds-WP_000769292.1;Parent=gene-CCO56_RS14720;Dbxref=GenBank:WP_000769292.1;Name=WP_000769292.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=CCO56_RS14720;product=DUF1471 family protein YdgH;protein_id=WP_000769292.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 20213 21595 . + . ID=gene-CCO56_RS14725;Name=CCO56_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14725;old_locus_tag=CCO56_14720 NZ_NPMB01000007.1 Protein Homology CDS 20213 21595 . + 0 ID=cds-WP_000412353.1;Parent=gene-CCO56_RS14725;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=CCO56_RS14725;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 21657 21992 . - . ID=gene-CCO56_RS14730;Name=CCO56_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14730;old_locus_tag=CCO56_14725 NZ_NPMB01000007.1 Protein Homology CDS 21657 21992 . - 0 ID=cds-WP_000524877.1;Parent=gene-CCO56_RS14730;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=CCO56_RS14730;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 22119 22850 . + . ID=gene-CCO56_RS14735;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=CCO56_RS14735;old_locus_tag=CCO56_14730 NZ_NPMB01000007.1 Protein Homology CDS 22119 22850 . + 0 ID=cds-WP_001080048.1;Parent=gene-CCO56_RS14735;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=CCO56_RS14735;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 23329 24471 . + . ID=gene-CCO56_RS14745;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO56_RS14745;old_locus_tag=CCO56_14745 NZ_NPMB01000007.1 Protein Homology CDS 23329 24471 . + 0 ID=cds-WP_000824337.1;Parent=gene-CCO56_RS14745;Dbxref=GenBank:WP_000824337.1;Name=WP_000824337.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=CCO56_RS14745;product=porin OmpC;protein_id=WP_000824337.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 24624 26330 . + . ID=gene-CCO56_RS14750;Name=CCO56_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14750;old_locus_tag=CCO56_14750 NZ_NPMB01000007.1 Protein Homology CDS 24624 26330 . + 0 ID=cds-WP_000928679.1;Parent=gene-CCO56_RS14750;Dbxref=GenBank:WP_000928679.1;Name=WP_000928679.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=CCO56_RS14750;product=amidohydrolase;protein_id=WP_000928679.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 26442 27743 . + . ID=gene-CCO56_RS14755;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=CCO56_RS14755;old_locus_tag=CCO56_14755 NZ_NPMB01000007.1 Protein Homology CDS 26442 27743 . + 0 ID=cds-WP_000732948.1;Parent=gene-CCO56_RS14755;Dbxref=GenBank:WP_000732948.1;Name=WP_000732948.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=CCO56_RS14755;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732948.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 27819 28748 . + . ID=gene-CCO56_RS14760;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=CCO56_RS14760;old_locus_tag=CCO56_14760 NZ_NPMB01000007.1 Protein Homology CDS 27819 28748 . + 0 ID=cds-WP_000092497.1;Parent=gene-CCO56_RS14760;Dbxref=GenBank:WP_000092497.1;Name=WP_000092497.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=CCO56_RS14760;product=DNA replication terminus site-binding protein;protein_id=WP_000092497.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 28745 30148 . - . ID=gene-CCO56_RS14765;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CCO56_RS14765;old_locus_tag=CCO56_14765 NZ_NPMB01000007.1 Protein Homology CDS 28745 30148 . - 0 ID=cds-WP_000259117.1;Parent=gene-CCO56_RS14765;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=CCO56_RS14765;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 30316 31962 . - . ID=gene-CCO56_RS14770;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=CCO56_RS14770;old_locus_tag=CCO56_14770 NZ_NPMB01000007.1 Protein Homology CDS 30316 31962 . - 0 ID=cds-WP_000066609.1;Parent=gene-CCO56_RS14770;Dbxref=GenBank:WP_000066609.1;Name=WP_000066609.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=CCO56_RS14770;product=class I fumarate hydratase;protein_id=WP_000066609.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 32162 33337 . + . ID=gene-CCO56_RS14775;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CCO56_RS14775;old_locus_tag=CCO56_14775 NZ_NPMB01000007.1 Protein Homology CDS 32162 33337 . + 0 ID=cds-WP_001170622.1;Parent=gene-CCO56_RS14775;Dbxref=GenBank:WP_001170622.1;Name=WP_001170622.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=CCO56_RS14775;product=mannose-6-phosphate isomerase;protein_id=WP_001170622.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 33440 34948 . + . ID=gene-CCO56_RS14780;Name=CCO56_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14780;old_locus_tag=CCO56_14780 NZ_NPMB01000007.1 Protein Homology CDS 33440 34948 . + 0 ID=cds-WP_000753328.1;Parent=gene-CCO56_RS14780;Dbxref=GenBank:WP_000753328.1;Name=WP_000753328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=CCO56_RS14780;product=YdgA family protein;protein_id=WP_000753328.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 35006 36034 . - . ID=gene-CCO56_RS14785;Name=CCO56_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14785;old_locus_tag=CCO56_14785 NZ_NPMB01000007.1 Protein Homology CDS 35006 36034 . - 0 ID=cds-WP_000951918.1;Parent=gene-CCO56_RS14785;Dbxref=GenBank:WP_000951918.1;Name=WP_000951918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=CCO56_RS14785;product=Mal regulon transcriptional regulator MalI;protein_id=WP_000951918.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 36207 37799 . + . ID=gene-CCO56_RS14790;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=CCO56_RS14790;old_locus_tag=CCO56_14790 NZ_NPMB01000007.1 Protein Homology CDS 36207 37799 . + 0 ID=cds-WP_000208903.1;Parent=gene-CCO56_RS14790;Dbxref=GenBank:WP_000208903.1;Name=WP_000208903.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=malX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=CCO56_RS14790;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_000208903.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 37809 38981 . + . ID=gene-CCO56_RS14795;Name=CCO56_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14795;old_locus_tag=CCO56_14795 NZ_NPMB01000007.1 Protein Homology CDS 37809 38981 . + 0 ID=cds-WP_076165994.1;Parent=gene-CCO56_RS14795;Dbxref=GenBank:WP_076165994.1;Name=WP_076165994.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=CCO56_RS14795;product=MalY/PatB family protein;protein_id=WP_076165994.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 39195 40196 . + . ID=gene-CCO56_RS14800;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CCO56_RS14800;old_locus_tag=CCO56_14800 NZ_NPMB01000007.1 Protein Homology CDS 39195 40196 . + 0 ID=cds-WP_000565564.1;Parent=gene-CCO56_RS14800;Dbxref=GenBank:WP_000565564.1;Name=WP_000565564.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=CCO56_RS14800;product=adenosine deaminase;protein_id=WP_000565564.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 40271 41311 . - . ID=gene-CCO56_RS14805;Name=CCO56_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14805;old_locus_tag=CCO56_14805 NZ_NPMB01000007.1 Protein Homology CDS 40271 41311 . - 0 ID=cds-WP_000998242.1;Parent=gene-CCO56_RS14805;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=CCO56_RS14805;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 41519 41644 . + . ID=gene-CCO56_RS14810;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=CCO56_RS14810;old_locus_tag=CCO56_14810 NZ_NPMB01000007.1 Protein Homology CDS 41519 41644 . + 0 ID=cds-WP_001708800.1;Parent=gene-CCO56_RS14810;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=CCO56_RS14810;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 41943 42158 . + . ID=gene-CCO56_RS14815;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=CCO56_RS14815;old_locus_tag=CCO56_14815 NZ_NPMB01000007.1 Protein Homology CDS 41943 42158 . + 0 ID=cds-WP_000217946.1;Parent=gene-CCO56_RS14815;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=CCO56_RS14815;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 42247 42687 . + . ID=gene-CCO56_RS14820;Name=CCO56_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14820;old_locus_tag=CCO56_14820 NZ_NPMB01000007.1 Protein Homology CDS 42247 42687 . + 0 ID=cds-WP_000214061.1;Parent=gene-CCO56_RS14820;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=CCO56_RS14820;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 42764 43345 . + . ID=gene-CCO56_RS14825;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=CCO56_RS14825;old_locus_tag=CCO56_14825 NZ_NPMB01000007.1 Protein Homology CDS 42764 43345 . + 0 ID=cds-WP_000133179.1;Parent=gene-CCO56_RS14825;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=CCO56_RS14825;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 43345 43923 . + . ID=gene-CCO56_RS14830;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=CCO56_RS14830;old_locus_tag=CCO56_14830 NZ_NPMB01000007.1 Protein Homology CDS 43345 43923 . + 0 ID=cds-WP_076165989.1;Parent=gene-CCO56_RS14830;Dbxref=GenBank:WP_076165989.1;Name=WP_076165989.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=CCO56_RS14830;product=electron transport complex subunit RsxB;protein_id=WP_076165989.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 43916 46123 . + . ID=gene-CCO56_RS14835;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=CCO56_RS14835;old_locus_tag=CCO56_14835 NZ_NPMB01000007.1 Protein Homology CDS 43916 46123 . + 0 ID=cds-WP_094882059.1;Parent=gene-CCO56_RS14835;Dbxref=GenBank:WP_094882059.1;Name=WP_094882059.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=CCO56_RS14835;product=electron transport complex subunit RsxC;protein_id=WP_094882059.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 46124 47182 . + . ID=gene-CCO56_RS14840;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=CCO56_RS14840;old_locus_tag=CCO56_14840 NZ_NPMB01000007.1 Protein Homology CDS 46124 47182 . + 0 ID=cds-WP_023212221.1;Parent=gene-CCO56_RS14840;Dbxref=GenBank:WP_023212221.1;Name=WP_023212221.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=CCO56_RS14840;product=electron transport complex subunit RsxD;protein_id=WP_023212221.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 47186 47806 . + . ID=gene-CCO56_RS14845;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=CCO56_RS14845;old_locus_tag=CCO56_14845 NZ_NPMB01000007.1 Protein Homology CDS 47186 47806 . + 0 ID=cds-WP_000920817.1;Parent=gene-CCO56_RS14845;Dbxref=GenBank:WP_000920817.1;Name=WP_000920817.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=CCO56_RS14845;product=electron transport complex subunit RsxG;protein_id=WP_000920817.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 47809 48501 . + . ID=gene-CCO56_RS14850;Name=CCO56_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14850;old_locus_tag=CCO56_14850 NZ_NPMB01000007.1 Protein Homology CDS 47809 48501 . + 0 ID=cds-WP_001289628.1;Parent=gene-CCO56_RS14850;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=CCO56_RS14850;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 48501 49136 . + . ID=gene-CCO56_RS14855;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CCO56_RS14855;old_locus_tag=CCO56_14855 NZ_NPMB01000007.1 Protein Homology CDS 48501 49136 . + 0 ID=cds-WP_001030318.1;Parent=gene-CCO56_RS14855;Dbxref=GenBank:WP_001030318.1;Name=WP_001030318.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=CCO56_RS14855;product=endonuclease III;protein_id=WP_001030318.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 49738 51243 . + . ID=gene-CCO56_RS14860;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=CCO56_RS14860;old_locus_tag=CCO56_14860 NZ_NPMB01000007.1 Protein Homology CDS 49738 51243 . + 0 ID=cds-WP_023230768.1;Parent=gene-CCO56_RS14860;Dbxref=GenBank:WP_023230768.1;Name=WP_023230768.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=CCO56_RS14860;product=dipeptide/tripeptide permease DtpA;protein_id=WP_023230768.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 51348 51953 . + . ID=gene-CCO56_RS14865;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=CCO56_RS14865;old_locus_tag=CCO56_14865 NZ_NPMB01000007.1 Protein Homology CDS 51348 51953 . + 0 ID=cds-WP_000765727.1;Parent=gene-CCO56_RS14865;Dbxref=GenBank:WP_000765727.1;Name=WP_000765727.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=CCO56_RS14865;product=glutathione transferase GstA;protein_id=WP_000765727.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 52012 52872 . - . ID=gene-CCO56_RS14870;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=CCO56_RS14870;old_locus_tag=CCO56_14870 NZ_NPMB01000007.1 Protein Homology CDS 52012 52872 . - 0 ID=cds-WP_000789736.1;Parent=gene-CCO56_RS14870;Dbxref=GenBank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=CCO56_RS14870;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 52932 54206 . - . ID=gene-CCO56_RS14875;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CCO56_RS14875;old_locus_tag=CCO56_14875 NZ_NPMB01000007.1 Protein Homology CDS 52932 54206 . - 0 ID=cds-WP_000168626.1;Parent=gene-CCO56_RS14875;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=CCO56_RS14875;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 54333 54989 . - . ID=gene-CCO56_RS14880;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=CCO56_RS14880;old_locus_tag=CCO56_14880 NZ_NPMB01000007.1 Protein Homology CDS 54333 54989 . - 0 ID=cds-WP_001282334.1;Parent=gene-CCO56_RS14880;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=CCO56_RS14880;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 55048 55377 . - . ID=gene-CCO56_RS14885;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=CCO56_RS14885;old_locus_tag=CCO56_14885 NZ_NPMB01000007.1 Protein Homology CDS 55048 55377 . - 0 ID=cds-WP_001132086.1;Parent=gene-CCO56_RS14885;Dbxref=GenBank:WP_001132086.1;Name=WP_001132086.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=CCO56_RS14885;product=C-type lysozyme inhibitor;protein_id=WP_001132086.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 55465 56586 . - . ID=gene-CCO56_RS14890;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=CCO56_RS14890;old_locus_tag=CCO56_14890 NZ_NPMB01000007.1 Protein Homology CDS 55465 56586 . - 0 ID=cds-WP_000835021.1;Parent=gene-CCO56_RS14890;Dbxref=GenBank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=CCO56_RS14890;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 56859 57326 . + . ID=gene-CCO56_RS14895;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=CCO56_RS14895;old_locus_tag=CCO56_14895 NZ_NPMB01000007.1 Protein Homology CDS 56859 57326 . + 0 ID=cds-WP_000597179.1;Parent=gene-CCO56_RS14895;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=CCO56_RS14895;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 57374 57814 . - . ID=gene-CCO56_RS14900;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=CCO56_RS14900;old_locus_tag=CCO56_14900 NZ_NPMB01000007.1 Protein Homology CDS 57374 57814 . - 0 ID=cds-WP_000764552.1;Parent=gene-CCO56_RS14900;Dbxref=GenBank:WP_000764552.1;Name=WP_000764552.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=CCO56_RS14900;product=transcriptional regulator SlyA;protein_id=WP_000764552.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 58009 58245 . + . ID=gene-CCO56_RS14905;Name=CCO56_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14905;old_locus_tag=CCO56_14905 NZ_NPMB01000007.1 Protein Homology CDS 58009 58245 . + 0 ID=cds-WP_000649756.1;Parent=gene-CCO56_RS14905;Dbxref=GenBank:WP_000649756.1;Name=WP_000649756.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=CCO56_RS14905;product=DUF1656 domain-containing protein;protein_id=WP_000649756.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 58248 59108 . + . ID=gene-CCO56_RS14910;Name=CCO56_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14910;old_locus_tag=CCO56_14910 NZ_NPMB01000007.1 Protein Homology CDS 58248 59108 . + 0 ID=cds-WP_001520441.1;Parent=gene-CCO56_RS14910;Dbxref=GenBank:WP_001520441.1;Name=WP_001520441.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=CCO56_RS14910;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001520441.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 59108 61147 . + . ID=gene-CCO56_RS14915;Name=CCO56_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14915;old_locus_tag=CCO56_14915 NZ_NPMB01000007.1 Protein Homology CDS 59108 61147 . + 0 ID=cds-WP_023137443.1;Parent=gene-CCO56_RS14915;Dbxref=GenBank:WP_023137443.1;Name=WP_023137443.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=CCO56_RS14915;product=FUSC family protein;protein_id=WP_023137443.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 61123 61644 . - . ID=gene-CCO56_RS14920;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=CCO56_RS14920;old_locus_tag=CCO56_14920 NZ_NPMB01000007.1 Protein Homology CDS 61123 61644 . - 0 ID=cds-WP_000826820.1;Parent=gene-CCO56_RS14920;Dbxref=GenBank:WP_000826820.1;Name=WP_000826820.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=CCO56_RS14920;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826820.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 61724 62620 . - . ID=gene-CCO56_RS14925;Name=CCO56_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14925;old_locus_tag=CCO56_14925 NZ_NPMB01000007.1 Protein Homology CDS 61724 62620 . - 0 ID=cds-WP_079821938.1;Parent=gene-CCO56_RS14925;Dbxref=GenBank:WP_079821938.1;Name=WP_079821938.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=CCO56_RS14925;product=aldo/keto reductase;protein_id=WP_079821938.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 62671 62910 . - . ID=gene-CCO56_RS14930;Name=CCO56_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14930;old_locus_tag=CCO56_14930 NZ_NPMB01000007.1 Protein Homology CDS 62671 62910 . - 0 ID=cds-WP_001538148.1;Parent=gene-CCO56_RS14930;Dbxref=GenBank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=CCO56_RS14930;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 63013 63612 . + . ID=gene-CCO56_RS14935;Name=CCO56_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14935;old_locus_tag=CCO56_14935 NZ_NPMB01000007.1 Protein Homology CDS 63013 63612 . + 0 ID=cds-WP_001041823.1;Parent=gene-CCO56_RS14935;Dbxref=GenBank:WP_001041823.1;Name=WP_001041823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=CCO56_RS14935;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 63671 64768 . + . ID=gene-CCO56_RS14940;Name=CCO56_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14940;old_locus_tag=CCO56_14940 NZ_NPMB01000007.1 Protein Homology CDS 63671 64768 . + 0 ID=cds-WP_023230767.1;Parent=gene-CCO56_RS14940;Dbxref=GenBank:WP_023230767.1;Name=WP_023230767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=CCO56_RS14940;product=alkene reductase;protein_id=WP_023230767.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 64837 65244 . + . ID=gene-CCO56_RS14945;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=CCO56_RS14945;old_locus_tag=CCO56_14945 NZ_NPMB01000007.1 Protein Homology CDS 64837 65244 . + 0 ID=cds-WP_001237787.1;Parent=gene-CCO56_RS14945;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=CCO56_RS14945;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 65345 65992 . + . ID=gene-CCO56_RS14950;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=CCO56_RS14950;old_locus_tag=CCO56_14950 NZ_NPMB01000007.1 Protein Homology CDS 65345 65992 . + 0 ID=cds-WP_001282271.1;Parent=gene-CCO56_RS14950;Dbxref=GenBank:WP_001282271.1;Name=WP_001282271.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=CCO56_RS14950;product=ribonuclease T;protein_id=WP_001282271.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 66070 66417 . - . ID=gene-CCO56_RS14960;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=CCO56_RS14960;old_locus_tag=CCO56_14960 NZ_NPMB01000007.1 Protein Homology CDS 66070 66417 . - 0 ID=cds-WP_000108176.1;Parent=gene-CCO56_RS14960;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=CCO56_RS14960;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 66753 67574 . + . ID=gene-CCO56_RS14965;Name=CCO56_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14965;old_locus_tag=CCO56_14965 NZ_NPMB01000007.1 Protein Homology CDS 66753 67574 . + 0 ID=cds-WP_023223549.1;Parent=gene-CCO56_RS14965;Dbxref=GenBank:WP_023223549.1;Name=WP_023223549.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=CCO56_RS14965;product=C40 family peptidase;protein_id=WP_023223549.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 67701 68282 . + . ID=gene-CCO56_RS14970;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=CCO56_RS14970;old_locus_tag=CCO56_14970 NZ_NPMB01000007.1 Protein Homology CDS 67701 68282 . + 0 ID=cds-WP_000007294.1;Parent=gene-CCO56_RS14970;Dbxref=GenBank:WP_000007294.1;Name=WP_000007294.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=CCO56_RS14970;product=superoxide dismutase [Fe];protein_id=WP_000007294.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 68363 68452 . - . ID=gene-CCO56_RS14975;Name=CCO56_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS14975;old_locus_tag=CCO56_14975 NZ_NPMB01000007.1 Protein Homology CDS 68363 68452 . - 0 ID=cds-WP_000102277.1;Parent=gene-CCO56_RS14975;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=CCO56_RS14975;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 68748 69773 . + . ID=gene-CCO56_RS14985;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CCO56_RS14985;old_locus_tag=CCO56_14985 NZ_NPMB01000007.1 Protein Homology CDS 68748 69773 . + 0 ID=cds-WP_000190993.1;Parent=gene-CCO56_RS14985;Dbxref=GenBank:WP_000190993.1;Name=WP_000190993.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=CCO56_RS14985;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190993.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 69770 70702 . - . ID=gene-CCO56_RS14990;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=CCO56_RS14990;old_locus_tag=CCO56_14990 NZ_NPMB01000007.1 Protein Homology CDS 69770 70702 . - 0 ID=cds-WP_000269523.1;Parent=gene-CCO56_RS14990;Dbxref=GenBank:WP_000269523.1;Name=WP_000269523.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=CCO56_RS14990;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269523.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 70815 72020 . + . ID=gene-CCO56_RS14995;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=CCO56_RS14995;old_locus_tag=CCO56_14995 NZ_NPMB01000007.1 Protein Homology CDS 70815 72020 . + 0 ID=cds-WP_001182317.1;Parent=gene-CCO56_RS14995;Dbxref=GenBank:WP_001182317.1;Name=WP_001182317.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=CCO56_RS14995;product=purine nucleoside transporter PunC;protein_id=WP_001182317.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 72310 73458 . + . ID=gene-CCO56_RS15000;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=CCO56_RS15000;old_locus_tag=CCO56_15000 NZ_NPMB01000007.1 Protein Homology CDS 72310 73458 . + 0 ID=cds-WP_000098879.1;Parent=gene-CCO56_RS15000;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=CCO56_RS15000;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 73500 74141 . - . ID=gene-CCO56_RS15005;Name=CCO56_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15005;old_locus_tag=CCO56_15005 NZ_NPMB01000007.1 Protein Homology CDS 73500 74141 . - 0 ID=cds-WP_000493971.1;Parent=gene-CCO56_RS15005;Dbxref=GenBank:WP_000493971.1;Name=WP_000493971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=CCO56_RS15005;product=riboflavin synthase;protein_id=WP_000493971.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 74358 75731 . + . ID=gene-CCO56_RS15010;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=CCO56_RS15010;old_locus_tag=CCO56_15010 NZ_NPMB01000007.1 Protein Homology CDS 74358 75731 . + 0 ID=cds-WP_001175081.1;Parent=gene-CCO56_RS15010;Dbxref=GenBank:WP_001175081.1;Name=WP_001175081.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=CCO56_RS15010;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175081.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 75883 75959 . + . ID=gene-CCO56_RS15015;Name=CCO56_RS15015;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS15015;old_locus_tag=CCO56_15015 NZ_NPMB01000007.1 tRNAscan-SE tRNA 75883 75959 . + . ID=rna-CCO56_RS15015;Parent=gene-CCO56_RS15015;anticodon=(pos:75917..75919);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS15015;product=tRNA-Val NZ_NPMB01000007.1 tRNAscan-SE exon 75883 75959 . + . ID=exon-CCO56_RS15015-1;Parent=rna-CCO56_RS15015;anticodon=(pos:75917..75919);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS15015;product=tRNA-Val NZ_NPMB01000007.1 RefSeq gene 75970 76046 . + . ID=gene-CCO56_RS15020;Name=CCO56_RS15020;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS15020;old_locus_tag=CCO56_15020 NZ_NPMB01000007.1 tRNAscan-SE tRNA 75970 76046 . + . ID=rna-CCO56_RS15020;Parent=gene-CCO56_RS15020;anticodon=(pos:76004..76006);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS15020;product=tRNA-Val NZ_NPMB01000007.1 tRNAscan-SE exon 75970 76046 . + . ID=exon-CCO56_RS15020-1;Parent=rna-CCO56_RS15020;anticodon=(pos:76004..76006);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS15020;product=tRNA-Val NZ_NPMB01000007.1 RefSeq gene 76214 77272 . - . ID=gene-CCO56_RS15025;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=CCO56_RS15025;old_locus_tag=CCO56_15025 NZ_NPMB01000007.1 Protein Homology CDS 76214 77272 . - 0 ID=cds-WP_001291707.1;Parent=gene-CCO56_RS15025;Dbxref=GenBank:WP_001291707.1;Name=WP_001291707.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=CCO56_RS15025;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_001291707.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 77269 78048 . - . ID=gene-CCO56_RS15030;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=CCO56_RS15030;old_locus_tag=CCO56_15030 NZ_NPMB01000007.1 Protein Homology CDS 77269 78048 . - 0 ID=cds-WP_000068770.1;Parent=gene-CCO56_RS15030;Dbxref=GenBank:WP_000068770.1;Name=WP_000068770.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=CCO56_RS15030;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068770.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 78049 78315 . - . ID=gene-CCO56_RS15035;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=CCO56_RS15035;old_locus_tag=CCO56_15035 NZ_NPMB01000007.1 Protein Homology CDS 78049 78315 . - 0 ID=cds-WP_000999982.1;Parent=gene-CCO56_RS15035;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=CCO56_RS15035;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 78312 78959 . - . ID=gene-CCO56_RS15040;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=CCO56_RS15040;old_locus_tag=CCO56_15040 NZ_NPMB01000007.1 Protein Homology CDS 78312 78959 . - 0 ID=cds-WP_000056367.1;Parent=gene-CCO56_RS15040;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=CCO56_RS15040;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 79027 79995 . - . ID=gene-CCO56_RS15045;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=CCO56_RS15045;old_locus_tag=CCO56_15045 NZ_NPMB01000007.1 Protein Homology CDS 79027 79995 . - 0 ID=cds-WP_023205901.1;Parent=gene-CCO56_RS15045;Dbxref=GenBank:WP_023205901.1;Name=WP_023205901.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=CCO56_RS15045;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_023205901.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 79976 80350 . - . ID=gene-CCO56_RS15050;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=CCO56_RS15050;old_locus_tag=CCO56_15050 NZ_NPMB01000007.1 Protein Homology CDS 79976 80350 . - 0 ID=cds-WP_001223304.1;Parent=gene-CCO56_RS15050;Dbxref=GenBank:WP_001223304.1;Name=WP_001223304.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=CCO56_RS15050;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223304.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 80331 80708 . - . ID=gene-CCO56_RS15055;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=CCO56_RS15055;old_locus_tag=CCO56_15055 NZ_NPMB01000007.1 Protein Homology CDS 80331 80708 . - 0 ID=cds-WP_000449093.1;Parent=gene-CCO56_RS15055;Dbxref=GenBank:WP_000449093.1;Name=WP_000449093.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=CCO56_RS15055;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449093.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 80711 82012 . - . ID=gene-CCO56_RS15060;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=CCO56_RS15060;old_locus_tag=CCO56_15060 NZ_NPMB01000007.1 Protein Homology CDS 80711 82012 . - 0 ID=cds-WP_000787216.1;Parent=gene-CCO56_RS15060;Dbxref=GenBank:WP_000787216.1;Name=WP_000787216.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=CCO56_RS15060;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_000787216.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 82002 84047 . - . ID=gene-CCO56_RS15065;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=CCO56_RS15065;old_locus_tag=CCO56_15065 NZ_NPMB01000007.1 Protein Homology CDS 82002 84047 . - 0 ID=cds-WP_080177200.1;Parent=gene-CCO56_RS15065;Dbxref=GenBank:WP_080177200.1;Name=WP_080177200.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=CCO56_RS15065;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_080177200.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 84032 84400 . - . ID=gene-CCO56_RS15070;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=CCO56_RS15070;old_locus_tag=CCO56_15070 NZ_NPMB01000007.1 Protein Homology CDS 84032 84400 . - 0 ID=cds-WP_000383700.1;Parent=gene-CCO56_RS15070;Dbxref=GenBank:WP_000383700.1;Name=WP_000383700.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=CCO56_RS15070;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383700.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 84458 85474 . - . ID=gene-CCO56_RS15075;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=CCO56_RS15075;old_locus_tag=CCO56_15075 NZ_NPMB01000007.1 Protein Homology CDS 84458 85474 . - 0 ID=cds-WP_000238886.1;Parent=gene-CCO56_RS15075;Dbxref=GenBank:WP_000238886.1;Name=WP_000238886.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=CCO56_RS15075;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_000238886.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 85440 86114 . - . ID=gene-CCO56_RS15080;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=CCO56_RS15080;old_locus_tag=CCO56_15080 NZ_NPMB01000007.1 Protein Homology CDS 85440 86114 . - 0 ID=cds-WP_000011206.1;Parent=gene-CCO56_RS15080;Dbxref=GenBank:WP_000011206.1;Name=WP_000011206.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=CCO56_RS15080;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_000011206.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 86111 86659 . - . ID=gene-CCO56_RS15085;Name=CCO56_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15085;old_locus_tag=CCO56_15085 NZ_NPMB01000007.1 Protein Homology CDS 86111 86659 . - 0 ID=cds-WP_001531605.1;Parent=gene-CCO56_RS15085;Dbxref=GenBank:WP_001531605.1;Name=WP_001531605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=CCO56_RS15085;product=type III secretion system domain-containing protein;protein_id=WP_001531605.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 86677 87426 . - . ID=gene-CCO56_RS15090;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=CCO56_RS15090;old_locus_tag=CCO56_15090 NZ_NPMB01000007.1 Protein Homology CDS 86677 87426 . - 0 ID=cds-WP_000868146.1;Parent=gene-CCO56_RS15090;Dbxref=GenBank:WP_000868146.1;Name=WP_000868146.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=CCO56_RS15090;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_000868146.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 87423 87671 . - . ID=gene-CCO56_RS15095;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=CCO56_RS15095;old_locus_tag=CCO56_15095 NZ_NPMB01000007.1 Protein Homology CDS 87423 87671 . - 0 ID=cds-WP_023194623.1;Parent=gene-CCO56_RS15095;Dbxref=GenBank:WP_023194623.1;Name=WP_023194623.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=CCO56_RS15095;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_023194623.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 87683 87973 . - . ID=gene-CCO56_RS15100;Name=CCO56_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15100;old_locus_tag=CCO56_15100 NZ_NPMB01000007.1 Protein Homology CDS 87683 87973 . - 0 ID=cds-WP_000444713.1;Parent=gene-CCO56_RS15100;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=CCO56_RS15100;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 87951 88166 . - . ID=gene-CCO56_RS15105;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=CCO56_RS15105;old_locus_tag=CCO56_15105 NZ_NPMB01000007.1 Protein Homology CDS 87951 88166 . - 0 ID=cds-WP_000350226.1;Parent=gene-CCO56_RS15105;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=CCO56_RS15105;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 88260 88949 . - . ID=gene-CCO56_RS15110;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=CCO56_RS15110;old_locus_tag=CCO56_15110 NZ_NPMB01000007.1 Protein Homology CDS 88260 88949 . - 0 ID=cds-WP_000805853.1;Parent=gene-CCO56_RS15110;Dbxref=GenBank:WP_000805853.1;Name=WP_000805853.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=CCO56_RS15110;product=pathogenicity island 2 effector protein SseG;protein_id=WP_000805853.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 88946 89728 . - . ID=gene-CCO56_RS15115;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=CCO56_RS15115;old_locus_tag=CCO56_15115 NZ_NPMB01000007.1 Protein Homology CDS 88946 89728 . - 0 ID=cds-WP_080177201.1;Parent=gene-CCO56_RS15115;Dbxref=GenBank:WP_080177201.1;Name=WP_080177201.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=CCO56_RS15115;product=type III secretion systems effector SseF;protein_id=WP_080177201.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 89744 90178 . - . ID=gene-CCO56_RS15120;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=CCO56_RS15120;old_locus_tag=CCO56_15120 NZ_NPMB01000007.1 Protein Homology CDS 89744 90178 . - 0 ID=cds-WP_000979963.1;Parent=gene-CCO56_RS15120;Dbxref=GenBank:WP_000979963.1;Name=WP_000979963.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=CCO56_RS15120;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979963.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 90230 90646 . - . ID=gene-CCO56_RS15125;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=CCO56_RS15125;old_locus_tag=CCO56_15125 NZ_NPMB01000007.1 Protein Homology CDS 90230 90646 . - 0 ID=cds-WP_000249602.1;Parent=gene-CCO56_RS15125;Dbxref=GenBank:WP_000249602.1;Name=WP_000249602.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=CCO56_RS15125;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249602.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 90649 91236 . - . ID=gene-CCO56_RS15130;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=CCO56_RS15130;old_locus_tag=CCO56_15130 NZ_NPMB01000007.1 Protein Homology CDS 90649 91236 . - 0 ID=cds-WP_080177202.1;Parent=gene-CCO56_RS15130;Dbxref=GenBank:WP_080177202.1;Name=WP_080177202.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=CCO56_RS15130;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_080177202.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 91252 92706 . - . ID=gene-CCO56_RS15135;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=CCO56_RS15135;old_locus_tag=CCO56_15135 NZ_NPMB01000007.1 Protein Homology CDS 91252 92706 . - 0 ID=cds-WP_001079746.1;Parent=gene-CCO56_RS15135;Dbxref=GenBank:WP_001079746.1;Name=WP_001079746.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=CCO56_RS15135;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WP_001079746.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 92709 93182 . - . ID=gene-CCO56_RS15140;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=CCO56_RS15140;old_locus_tag=CCO56_15140 NZ_NPMB01000007.1 Protein Homology CDS 92709 93182 . - 0 ID=cds-WP_023251581.1;Parent=gene-CCO56_RS15140;Dbxref=GenBank:WP_023251581.1;Name=WP_023251581.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=CCO56_RS15140;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_023251581.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 93179 93769 . - . ID=gene-CCO56_RS15145;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO56_RS15145;old_locus_tag=CCO56_15145 NZ_NPMB01000007.1 Protein Homology CDS 93179 93769 . - 0 ID=cds-WP_000094428.1;Parent=gene-CCO56_RS15145;Dbxref=GenBank:WP_000094428.1;Name=WP_000094428.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=CCO56_RS15145;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_000094428.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 93776 94102 . - . ID=gene-CCO56_RS15150;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO56_RS15150;old_locus_tag=CCO56_15150 NZ_NPMB01000007.1 Protein Homology CDS 93776 94102 . - 0 ID=cds-WP_000972856.1;Parent=gene-CCO56_RS15150;Dbxref=GenBank:WP_000972856.1;Name=WP_000972856.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=CCO56_RS15150;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972856.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 94305 94547 . - . ID=gene-CCO56_RS15160;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=CCO56_RS15160;old_locus_tag=CCO56_15160 NZ_NPMB01000007.1 Protein Homology CDS 94305 94547 . - 0 ID=cds-WP_000210202.1;Parent=gene-CCO56_RS15160;Dbxref=GenBank:WP_000210202.1;Name=WP_000210202.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=CCO56_RS15160;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_000210202.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 94555 95766 . - . ID=gene-CCO56_RS15165;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=CCO56_RS15165;old_locus_tag=CCO56_15165 NZ_NPMB01000007.1 Protein Homology CDS 94555 95766 . - 0 ID=cds-WP_000323795.1;Parent=gene-CCO56_RS15165;Dbxref=GenBank:WP_000323795.1;Name=WP_000323795.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=CCO56_RS15165;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_000323795.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 95747 97240 . - . ID=gene-CCO56_RS15170;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=CCO56_RS15170;old_locus_tag=CCO56_15170 NZ_NPMB01000007.1 Protein Homology CDS 95747 97240 . - 0 ID=cds-WP_000261286.1;Parent=gene-CCO56_RS15170;Dbxref=GenBank:WP_000261286.1;Name=WP_000261286.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=CCO56_RS15170;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261286.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 97242 97643 . - . ID=gene-CCO56_RS15175;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=CCO56_RS15175;old_locus_tag=CCO56_15175 NZ_NPMB01000007.1 Protein Homology CDS 97242 97643 . - 0 ID=cds-WP_001562740.1;Parent=gene-CCO56_RS15175;Dbxref=GenBank:WP_001562740.1;Name=WP_001562740.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=CCO56_RS15175;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001562740.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 98044 100806 . + . ID=gene-CCO56_RS15180;Name=CCO56_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15180;old_locus_tag=CCO56_15180 NZ_NPMB01000007.1 Protein Homology CDS 98044 100806 . + 0 ID=cds-WP_080177203.1;Parent=gene-CCO56_RS15180;Dbxref=GenBank:WP_080177203.1;Name=WP_080177203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=CCO56_RS15180;product=two component system sensor kinase;protein_id=WP_080177203.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 100837 101475 . + . ID=gene-CCO56_RS15185;Name=CCO56_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15185;old_locus_tag=CCO56_15185 NZ_NPMB01000007.1 Protein Homology CDS 100837 101475 . + 0 ID=cds-WP_000666335.1;Parent=gene-CCO56_RS15185;Dbxref=GenBank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=CCO56_RS15185;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 101654 102382 . + . ID=gene-CCO56_RS15190;Name=CCO56_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15190;old_locus_tag=CCO56_15190 NZ_NPMB01000007.1 Protein Homology CDS 101654 102382 . + 0 ID=cds-WP_080177204.1;Parent=gene-CCO56_RS15190;Dbxref=GenBank:WP_080177204.1;Name=WP_080177204.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=CCO56_RS15190;product=MerR family transcriptional regulator;protein_id=WP_080177204.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 102554 103513 . + . ID=gene-CCO56_RS15195;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=CCO56_RS15195;old_locus_tag=CCO56_15195 NZ_NPMB01000007.1 Protein Homology CDS 102554 103513 . + 0 ID=cds-WP_001060725.1;Parent=gene-CCO56_RS15195;Dbxref=GenBank:WP_001060725.1;Name=WP_001060725.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060725.1;locus_tag=CCO56_RS15195;product=transcriptional regulator MlrB;protein_id=WP_001060725.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 103609 103821 . - . ID=gene-CCO56_RS15200;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=CCO56_RS15200;old_locus_tag=CCO56_15200 NZ_NPMB01000007.1 Protein Homology CDS 103609 103821 . - 0 ID=cds-WP_000165779.1;Parent=gene-CCO56_RS15200;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=CCO56_RS15200;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 103919 104539 . - . ID=gene-CCO56_RS15205;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=CCO56_RS15205;old_locus_tag=CCO56_15205 NZ_NPMB01000007.1 Protein Homology CDS 103919 104539 . - 0 ID=cds-WP_000190929.1;Parent=gene-CCO56_RS15205;Dbxref=GenBank:WP_000190929.1;Name=WP_000190929.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=CCO56_RS15205;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190929.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 104514 106292 . - . ID=gene-CCO56_RS15210;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=CCO56_RS15210;old_locus_tag=CCO56_15210 NZ_NPMB01000007.1 Protein Homology CDS 104514 106292 . - 0 ID=cds-WP_001214426.1;Parent=gene-CCO56_RS15210;Dbxref=GenBank:WP_001214426.1;Name=WP_001214426.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=CCO56_RS15210;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_001214426.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 106474 107208 . + . ID=gene-CCO56_RS15215;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=CCO56_RS15215;old_locus_tag=CCO56_15215 NZ_NPMB01000007.1 Protein Homology CDS 106474 107208 . + 0 ID=cds-WP_001531132.1;Parent=gene-CCO56_RS15215;Dbxref=GenBank:WP_001531132.1;Name=WP_001531132.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=CCO56_RS15215;product=tetrathionate reductase subunit TtrB;protein_id=WP_001531132.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 107209 108231 . + . ID=gene-CCO56_RS15220;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=CCO56_RS15220;old_locus_tag=CCO56_15220 NZ_NPMB01000007.1 Protein Homology CDS 107209 108231 . + 0 ID=cds-WP_000149771.1;Parent=gene-CCO56_RS15220;Dbxref=GenBank:WP_000149771.1;Name=WP_000149771.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=CCO56_RS15220;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149771.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 108224 111286 . + . ID=gene-CCO56_RS15225;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=CCO56_RS15225;old_locus_tag=CCO56_15225 NZ_NPMB01000007.1 Protein Homology CDS 108224 111286 . + 0 ID=cds-WP_000002369.1;Parent=gene-CCO56_RS15225;Dbxref=GenBank:WP_000002369.1;Name=WP_000002369.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=CCO56_RS15225;product=tetrathionate reductase subunit TtrA;protein_id=WP_000002369.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 111609 112835 . + . ID=gene-CCO56_RS15230;Name=CCO56_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15230;old_locus_tag=CCO56_15230 NZ_NPMB01000007.1 Protein Homology CDS 111609 112835 . + 0 ID=cds-WP_023229600.1;Parent=gene-CCO56_RS15230;Dbxref=GenBank:WP_023229600.1;Name=WP_023229600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=CCO56_RS15230;product=PfkB family carbohydrate kinase;protein_id=WP_023229600.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 112847 113584 . + . ID=gene-CCO56_RS15235;Name=CCO56_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15235;old_locus_tag=CCO56_15235 NZ_NPMB01000007.1 Protein Homology CDS 112847 113584 . + 0 ID=cds-WP_000697187.1;Parent=gene-CCO56_RS15235;Dbxref=GenBank:WP_000697187.1;Name=WP_000697187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=CCO56_RS15235;product=glutamine amidotransferase;protein_id=WP_000697187.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 113643 114536 . + . ID=gene-CCO56_RS15240;Name=CCO56_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15240;old_locus_tag=CCO56_15240 NZ_NPMB01000007.1 Protein Homology CDS 113643 114536 . + 0 ID=cds-WP_053258993.1;Parent=gene-CCO56_RS15240;Dbxref=GenBank:WP_053258993.1;Name=WP_053258993.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=CCO56_RS15240;product=proline iminopeptidase-family hydrolase;protein_id=WP_053258993.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 114558 115901 . + . ID=gene-CCO56_RS15245;Name=CCO56_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15245;old_locus_tag=CCO56_15245 NZ_NPMB01000007.1 Protein Homology CDS 114558 115901 . + 0 ID=cds-WP_000756083.1;Parent=gene-CCO56_RS15245;Dbxref=GenBank:WP_000756083.1;Name=WP_000756083.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=CCO56_RS15245;product=APC family permease;protein_id=WP_000756083.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 116065 116295 . + . ID=gene-CCO56_RS24175;Name=CCO56_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24175 NZ_NPMB01000007.1 Protein Homology CDS 116065 116295 . + 0 ID=cds-WP_418143684.1;Parent=gene-CCO56_RS24175;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=CCO56_RS24175;product=hypothetical protein;protein_id=WP_418143684.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 116303 117715 . + . ID=gene-CCO56_RS15250;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=CCO56_RS15250;old_locus_tag=CCO56_15250 NZ_NPMB01000007.1 Protein Homology CDS 116303 117715 . + 0 ID=cds-WP_000751447.1;Parent=gene-CCO56_RS15250;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=CCO56_RS15250;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 118026 118262 . + . ID=gene-CCO56_RS15255;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=CCO56_RS15255;old_locus_tag=CCO56_15255 NZ_NPMB01000007.1 Protein Homology CDS 118026 118262 . + 0 ID=cds-WP_001082307.1;Parent=gene-CCO56_RS15255;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=CCO56_RS15255;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 118345 118584 . + . ID=gene-CCO56_RS15260;Name=CCO56_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15260;old_locus_tag=CCO56_15260 NZ_NPMB01000007.1 Protein Homology CDS 118345 118584 . + 0 ID=cds-WP_001531125.1;Parent=gene-CCO56_RS15260;Dbxref=GenBank:WP_001531125.1;Name=WP_001531125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=CCO56_RS15260;product=major outer membrane lipoprotein;protein_id=WP_001531125.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 118651 119652 . - . ID=gene-CCO56_RS15265;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=CCO56_RS15265;old_locus_tag=CCO56_15265 NZ_NPMB01000007.1 Protein Homology CDS 118651 119652 . - 0 ID=cds-WP_000817051.1;Parent=gene-CCO56_RS15265;Dbxref=GenBank:WP_000817051.1;Name=WP_000817051.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=CCO56_RS15265;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817051.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 119807 120223 . - . ID=gene-CCO56_RS15270;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=CCO56_RS15270;old_locus_tag=CCO56_15270 NZ_NPMB01000007.1 Protein Homology CDS 119807 120223 . - 0 ID=cds-WP_000729470.1;Parent=gene-CCO56_RS15270;Dbxref=GenBank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=CCO56_RS15270;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 120236 121456 . - . ID=gene-CCO56_RS15275;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=CCO56_RS15275;old_locus_tag=CCO56_15275 NZ_NPMB01000007.1 Protein Homology CDS 120236 121456 . - 0 ID=cds-WP_023229482.1;Parent=gene-CCO56_RS15275;Dbxref=GenBank:WP_023229482.1;Name=WP_023229482.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=CCO56_RS15275;product=cysteine desulfurase SufS;protein_id=WP_023229482.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 121453 122724 . - . ID=gene-CCO56_RS15280;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CCO56_RS15280;old_locus_tag=CCO56_15280 NZ_NPMB01000007.1 Protein Homology CDS 121453 122724 . - 0 ID=cds-WP_001605570.1;Parent=gene-CCO56_RS15280;Dbxref=GenBank:WP_001605570.1;Name=WP_001605570.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=CCO56_RS15280;product=Fe-S cluster assembly protein SufD;protein_id=WP_001605570.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 122699 123445 . - . ID=gene-CCO56_RS15285;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CCO56_RS15285;old_locus_tag=CCO56_15285 NZ_NPMB01000007.1 Protein Homology CDS 122699 123445 . - 0 ID=cds-WP_000948904.1;Parent=gene-CCO56_RS15285;Dbxref=GenBank:WP_000948904.1;Name=WP_000948904.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=CCO56_RS15285;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948904.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 123462 124949 . - . ID=gene-CCO56_RS15290;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CCO56_RS15290;old_locus_tag=CCO56_15290 NZ_NPMB01000007.1 Protein Homology CDS 123462 124949 . - 0 ID=cds-WP_000089383.1;Parent=gene-CCO56_RS15290;Dbxref=GenBank:WP_000089383.1;Name=WP_000089383.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=CCO56_RS15290;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089383.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 124958 125326 . - . ID=gene-CCO56_RS15295;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=CCO56_RS15295;old_locus_tag=CCO56_15295 NZ_NPMB01000007.1 Protein Homology CDS 124958 125326 . - 0 ID=cds-WP_000418970.1;Parent=gene-CCO56_RS15295;Dbxref=GenBank:WP_000418970.1;Name=WP_000418970.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=CCO56_RS15295;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418970.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 125753 127099 . + . ID=gene-CCO56_RS15300;Name=CCO56_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15300;old_locus_tag=CCO56_15300 NZ_NPMB01000007.1 Protein Homology CDS 125753 127099 . + 0 ID=cds-WP_000261858.1;Parent=gene-CCO56_RS15300;Dbxref=GenBank:WP_000261858.1;Name=WP_000261858.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=CCO56_RS15300;product=L-cystine transporter;protein_id=WP_000261858.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 127387 127575 . - . ID=gene-CCO56_RS15305;Name=CCO56_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15305;old_locus_tag=CCO56_15305 NZ_NPMB01000007.1 Protein Homology CDS 127387 127575 . - 0 ID=cds-WP_001537749.1;Parent=gene-CCO56_RS15305;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=CCO56_RS15305;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 127674 128084 . - . ID=gene-CCO56_RS15310;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CCO56_RS15310;old_locus_tag=CCO56_15310 NZ_NPMB01000007.1 Protein Homology CDS 127674 128084 . - 0 ID=cds-WP_000637926.1;Parent=gene-CCO56_RS15310;Dbxref=GenBank:WP_000637926.1;Name=WP_000637926.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=CCO56_RS15310;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637926.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 128081 131137 . - . ID=gene-CCO56_RS15315;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=CCO56_RS15315;old_locus_tag=CCO56_15315 NZ_NPMB01000007.1 Protein Homology CDS 128081 131137 . - 0 ID=cds-WP_080177333.1;Parent=gene-CCO56_RS15315;Dbxref=GenBank:WP_080177333.1;Name=WP_080177333.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=CCO56_RS15315;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_080177333.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 131402 132520 . + . ID=gene-CCO56_RS15320;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=CCO56_RS15320;old_locus_tag=CCO56_15320 NZ_NPMB01000007.1 Protein Homology CDS 131402 132520 . + 0 ID=cds-WP_000248615.1;Parent=gene-CCO56_RS15320;Dbxref=GenBank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=CCO56_RS15320;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 132703 132810 . + . ID=gene-CCO56_RS15325;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=CCO56_RS15325;old_locus_tag=CCO56_15325 NZ_NPMB01000007.1 cmsearch antisense_RNA 132703 132810 . + . ID=rna-CCO56_RS15325;Parent=gene-CCO56_RS15325;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS15325;product=antisense sRNA RprA NZ_NPMB01000007.1 cmsearch exon 132703 132810 . + . ID=exon-CCO56_RS15325-1;Parent=rna-CCO56_RS15325;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS15325;product=antisense sRNA RprA NZ_NPMB01000007.1 RefSeq gene 132978 133337 . + . ID=gene-CCO56_RS15330;Name=CCO56_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15330;old_locus_tag=CCO56_15330 NZ_NPMB01000007.1 Protein Homology CDS 132978 133337 . + 0 ID=cds-WP_001605585.1;Parent=gene-CCO56_RS15330;Dbxref=GenBank:WP_001605585.1;Name=WP_001605585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=CCO56_RS15330;product=YdiL family protein;protein_id=WP_001605585.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 133478 134689 . + . ID=gene-CCO56_RS15335;Name=CCO56_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15335;old_locus_tag=CCO56_15335 NZ_NPMB01000007.1 Protein Homology CDS 133478 134689 . + 0 ID=cds-WP_001605586.1;Parent=gene-CCO56_RS15335;Dbxref=GenBank:WP_001605586.1;Name=WP_001605586.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=CCO56_RS15335;product=MFS transporter;protein_id=WP_001605586.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 135053 136288 . + . ID=gene-CCO56_RS15340;Name=CCO56_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15340;old_locus_tag=CCO56_15340 NZ_NPMB01000007.1 Protein Homology CDS 135053 136288 . + 0 ID=cds-WP_080177334.1;Parent=gene-CCO56_RS15340;Dbxref=GenBank:WP_080177334.1;Name=WP_080177334.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=CCO56_RS15340;product=MFS transporter;protein_id=WP_080177334.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 136355 137221 . + . ID=gene-CCO56_RS15345;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=CCO56_RS15345;old_locus_tag=CCO56_15345 NZ_NPMB01000007.1 Protein Homology CDS 136355 137221 . + 0 ID=cds-WP_023207846.1;Parent=gene-CCO56_RS15345;Dbxref=GenBank:WP_023207846.1;Name=WP_023207846.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=CCO56_RS15345;product=quinate/shikimate dehydrogenase;protein_id=WP_023207846.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 137266 138024 . + . ID=gene-CCO56_RS15350;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CCO56_RS15350;old_locus_tag=CCO56_15350 NZ_NPMB01000007.1 Protein Homology CDS 137266 138024 . + 0 ID=cds-WP_023207847.1;Parent=gene-CCO56_RS15350;Dbxref=GenBank:WP_023207847.1;Name=WP_023207847.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=CCO56_RS15350;product=type I 3-dehydroquinate dehydratase;protein_id=WP_023207847.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 138179 139774 . + . ID=gene-CCO56_RS15355;Name=CCO56_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15355;old_locus_tag=CCO56_15355 NZ_NPMB01000007.1 Protein Homology CDS 138179 139774 . + 0 ID=cds-WP_001527696.1;Parent=gene-CCO56_RS15355;Dbxref=GenBank:WP_001527696.1;Name=WP_001527696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=CCO56_RS15355;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_001527696.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 139788 140939 . + . ID=gene-CCO56_RS15360;Name=CCO56_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15360;old_locus_tag=CCO56_15360 NZ_NPMB01000007.1 Protein Homology CDS 139788 140939 . + 0 ID=cds-WP_023214481.1;Parent=gene-CCO56_RS15360;Dbxref=GenBank:WP_023214481.1;Name=WP_023214481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=CCO56_RS15360;product=acyl-CoA dehydrogenase;protein_id=WP_023214481.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 141015 141905 . - . ID=gene-CCO56_RS15365;Name=CCO56_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15365;old_locus_tag=CCO56_15365 NZ_NPMB01000007.1 Protein Homology CDS 141015 141905 . - 0 ID=cds-WP_000284832.1;Parent=gene-CCO56_RS15365;Dbxref=GenBank:WP_000284832.1;Name=WP_000284832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=CCO56_RS15365;product=AraC family transcriptional regulator;protein_id=WP_000284832.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 142368 143132 . + . ID=gene-CCO56_RS15370;Name=CCO56_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15370;old_locus_tag=CCO56_15370 NZ_NPMB01000007.1 Protein Homology CDS 142368 143132 . + 0 ID=cds-WP_080177335.1;Parent=gene-CCO56_RS15370;Dbxref=GenBank:WP_080177335.1;Name=WP_080177335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=CCO56_RS15370;product=electron transfer flavoprotein;protein_id=WP_080177335.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 143154 144089 . + . ID=gene-CCO56_RS15375;Name=CCO56_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15375;old_locus_tag=CCO56_15375 NZ_NPMB01000007.1 Protein Homology CDS 143154 144089 . + 0 ID=cds-WP_001015878.1;Parent=gene-CCO56_RS15375;Dbxref=GenBank:WP_001015878.1;Name=WP_001015878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=CCO56_RS15375;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015878.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 144146 145432 . + . ID=gene-CCO56_RS15380;Name=CCO56_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15380;old_locus_tag=CCO56_15380 NZ_NPMB01000007.1 Protein Homology CDS 144146 145432 . + 0 ID=cds-WP_058344062.1;Parent=gene-CCO56_RS15380;Dbxref=GenBank:WP_058344062.1;Name=WP_058344062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=CCO56_RS15380;product=FAD-dependent oxidoreductase;protein_id=WP_058344062.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 145429 145722 . + . ID=gene-CCO56_RS15385;Name=CCO56_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15385;old_locus_tag=CCO56_15385 NZ_NPMB01000007.1 Protein Homology CDS 145429 145722 . + 0 ID=cds-WP_000093362.1;Parent=gene-CCO56_RS15385;Dbxref=GenBank:WP_000093362.1;Name=WP_000093362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=CCO56_RS15385;product=ferredoxin family protein;protein_id=WP_000093362.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 145812 147452 . + . ID=gene-CCO56_RS15390;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=CCO56_RS15390;old_locus_tag=CCO56_15390 NZ_NPMB01000007.1 Protein Homology CDS 145812 147452 . + 0 ID=cds-WP_058344063.1;Parent=gene-CCO56_RS15390;Dbxref=GenBank:WP_058344063.1;Name=WP_058344063.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=CCO56_RS15390;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_058344063.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 147494 149872 . - . ID=gene-CCO56_RS15395;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=CCO56_RS15395;old_locus_tag=CCO56_15395 NZ_NPMB01000007.1 Protein Homology CDS 147494 149872 . - 0 ID=cds-WP_000069340.1;Parent=gene-CCO56_RS15395;Dbxref=GenBank:WP_000069340.1;Name=WP_000069340.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=CCO56_RS15395;product=phosphoenolpyruvate synthase;protein_id=WP_000069340.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 150209 151042 . + . ID=gene-CCO56_RS15400;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=CCO56_RS15400;old_locus_tag=CCO56_15400 NZ_NPMB01000007.1 Protein Homology CDS 150209 151042 . + 0 ID=cds-WP_000370992.1;Parent=gene-CCO56_RS15400;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=CCO56_RS15400;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 151198 152244 . + . ID=gene-CCO56_RS15405;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=CCO56_RS15405;old_locus_tag=CCO56_15405 NZ_NPMB01000007.1 Protein Homology CDS 151198 152244 . + 0 ID=cds-WP_001082196.1;Parent=gene-CCO56_RS15405;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=CCO56_RS15405;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 152401 152592 . + . ID=gene-CCO56_RS15410;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=CCO56_RS15410;old_locus_tag=CCO56_15410 NZ_NPMB01000007.1 Protein Homology CDS 152401 152592 . + 0 ID=cds-WP_000089115.1;Parent=gene-CCO56_RS15410;Dbxref=GenBank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=CCO56_RS15410;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 152627 154069 . - . ID=gene-CCO56_RS15415;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=CCO56_RS15415;old_locus_tag=CCO56_15415 NZ_NPMB01000007.1 Protein Homology CDS 152627 154069 . - 0 ID=cds-WP_023194181.1;Parent=gene-CCO56_RS15415;Dbxref=GenBank:WP_023194181.1;Name=WP_023194181.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=CCO56_RS15415;product=protein adenylyltransferase SelO;protein_id=WP_023194181.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 154131 154844 . - . ID=gene-CCO56_RS15420;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=CCO56_RS15420;old_locus_tag=CCO56_15420 NZ_NPMB01000007.1 Protein Homology CDS 154131 154844 . - 0 ID=cds-WP_000562007.1;Parent=gene-CCO56_RS15420;Dbxref=GenBank:WP_000562007.1;Name=WP_000562007.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=CCO56_RS15420;product=anti-FlhDC factor YdiV;protein_id=WP_000562007.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 155158 155622 . - . ID=gene-CCO56_RS15425;Name=CCO56_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15425;old_locus_tag=CCO56_15425 NZ_NPMB01000007.1 Protein Homology CDS 155158 155622 . - 0 ID=cds-WP_001213256.1;Parent=gene-CCO56_RS15425;Dbxref=GenBank:WP_001213256.1;Name=WP_001213256.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=CCO56_RS15425;product=C40 family peptidase;protein_id=WP_001213256.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 155699 156448 . - . ID=gene-CCO56_RS15430;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=CCO56_RS15430;old_locus_tag=CCO56_15430 NZ_NPMB01000007.1 Protein Homology CDS 155699 156448 . - 0 ID=cds-WP_058344064.1;Parent=gene-CCO56_RS15430;Dbxref=GenBank:WP_058344064.1;Name=WP_058344064.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=CCO56_RS15430;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_058344064.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 156448 156999 . - . ID=gene-CCO56_RS15435;Name=CCO56_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15435;old_locus_tag=CCO56_15435 NZ_NPMB01000007.1 Protein Homology CDS 156448 156999 . - 0 ID=cds-WP_001181570.1;Parent=gene-CCO56_RS15435;Dbxref=GenBank:WP_001181570.1;Name=WP_001181570.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=CCO56_RS15435;product=glutathione peroxidase;protein_id=WP_001181570.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 157091 158071 . - . ID=gene-CCO56_RS15440;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=CCO56_RS15440;old_locus_tag=CCO56_15440 NZ_NPMB01000007.1 Protein Homology CDS 157091 158071 . - 0 ID=cds-WP_058344065.1;Parent=gene-CCO56_RS15440;Dbxref=GenBank:WP_058344065.1;Name=WP_058344065.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=CCO56_RS15440;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_058344065.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 158274 158573 . - . ID=gene-CCO56_RS15445;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=CCO56_RS15445;old_locus_tag=CCO56_15445 NZ_NPMB01000007.1 Protein Homology CDS 158274 158573 . - 0 ID=cds-WP_001229266.1;Parent=gene-CCO56_RS15445;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=CCO56_RS15445;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 158578 160965 . - . ID=gene-CCO56_RS15450;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CCO56_RS15450;old_locus_tag=CCO56_15450 NZ_NPMB01000007.1 Protein Homology CDS 158578 160965 . - 0 ID=cds-WP_024155293.1;Parent=gene-CCO56_RS15450;Dbxref=GenBank:WP_024155293.1;Name=WP_024155293.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=CCO56_RS15450;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_024155293.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 160981 161964 . - . ID=gene-CCO56_RS15455;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CCO56_RS15455;old_locus_tag=CCO56_15455 NZ_NPMB01000007.1 Protein Homology CDS 160981 161964 . - 0 ID=cds-WP_000018570.1;Parent=gene-CCO56_RS15455;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=CCO56_RS15455;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11 NZ_NPMB01000007.1 cmsearch sequence_feature 162027 162150 . - . ID=id-NZ_NPMB01000007.1:162027..162150;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMB01000007.1 RefSeq gene 162101 162145 . - . ID=gene-CCO56_RS23410;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=CCO56_RS23410 NZ_NPMB01000007.1 Protein Homology CDS 162101 162145 . - 0 ID=cds-WP_001386830.1;Parent=gene-CCO56_RS23410;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=CCO56_RS23410;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 162266 162622 . - . ID=gene-CCO56_RS15460;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CCO56_RS15460;old_locus_tag=CCO56_15460 NZ_NPMB01000007.1 Protein Homology CDS 162266 162622 . - 0 ID=cds-WP_000124850.1;Parent=gene-CCO56_RS15460;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=CCO56_RS15460;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 162673 162870 . - . ID=gene-CCO56_RS15465;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CCO56_RS15465;old_locus_tag=CCO56_15465 NZ_NPMB01000007.1 Protein Homology CDS 162673 162870 . - 0 ID=cds-WP_001124225.1;Parent=gene-CCO56_RS15465;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=CCO56_RS15465;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 162966 163508 . - . ID=gene-CCO56_RS15470;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CCO56_RS15470;old_locus_tag=CCO56_15470 NZ_NPMB01000007.1 Protein Homology CDS 162966 163508 . - 0 ID=cds-WP_001574431.1;Parent=gene-CCO56_RS15470;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=CCO56_RS15470;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 163512 165440 . - . ID=gene-CCO56_RS15475;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CCO56_RS15475;old_locus_tag=CCO56_15475 NZ_NPMB01000007.1 Protein Homology CDS 163512 165440 . - 0 ID=cds-WP_001144212.1;Parent=gene-CCO56_RS15475;Dbxref=GenBank:WP_001144212.1;Name=WP_001144212.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=CCO56_RS15475;product=threonine--tRNA ligase;protein_id=WP_001144212.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 165700 166554 . - . ID=gene-CCO56_RS15485;Name=CCO56_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15485;old_locus_tag=CCO56_15485 NZ_NPMB01000007.1 Protein Homology CDS 165700 166554 . - 0 ID=cds-WP_001044089.1;Parent=gene-CCO56_RS15485;Dbxref=GenBank:WP_001044089.1;Name=WP_001044089.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=CCO56_RS15485;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044089.1;transl_table=11 NZ_NPMB01000007.1 RefSeq pseudogene 166551 166865 . - . ID=gene-CCO56_RS15490;Name=CCO56_RS15490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS15490;old_locus_tag=CCO56_15490;pseudo=true NZ_NPMB01000007.1 Protein Homology CDS 166551 166865 . - 0 ID=cds-CCO56_RS15490;Parent=gene-CCO56_RS15490;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=CCO56_RS15490;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 167008 167967 . + . ID=gene-CCO56_RS15495;Name=CCO56_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15495;old_locus_tag=CCO56_15495 NZ_NPMB01000007.1 Protein Homology CDS 167008 167967 . + 0 ID=cds-WP_001046434.1;Parent=gene-CCO56_RS15495;Dbxref=GenBank:WP_001046434.1;Name=WP_001046434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=CCO56_RS15495;product=lipid A deacylase LpxR family protein;protein_id=WP_001046434.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 168016 168774 . - . ID=gene-CCO56_RS15500;Name=CCO56_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15500;old_locus_tag=CCO56_15500 NZ_NPMB01000007.1 Protein Homology CDS 168016 168774 . - 0 ID=cds-WP_000770981.1;Parent=gene-CCO56_RS15500;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=CCO56_RS15500;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 169063 169995 . + . ID=gene-CCO56_RS15505;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO56_RS15505;old_locus_tag=CCO56_15505 NZ_NPMB01000007.1 Protein Homology CDS 169063 169995 . + 0 ID=cds-WP_000251697.1;Parent=gene-CCO56_RS15505;Dbxref=GenBank:WP_000251697.1;Name=WP_000251697.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=CCO56_RS15505;product=6-phosphofructokinase II;protein_id=WP_000251697.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 170092 170382 . + . ID=gene-CCO56_RS15510;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=CCO56_RS15510;old_locus_tag=CCO56_15510 NZ_NPMB01000007.1 Protein Homology CDS 170092 170382 . + 0 ID=cds-WP_000146133.1;Parent=gene-CCO56_RS15510;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=CCO56_RS15510;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 170489 171349 . + . ID=gene-CCO56_RS15515;Name=CCO56_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15515;old_locus_tag=CCO56_15515 NZ_NPMB01000007.1 Protein Homology CDS 170489 171349 . + 0 ID=cds-WP_000267686.1;Parent=gene-CCO56_RS15515;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=CCO56_RS15515;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 171392 171928 . - . ID=gene-CCO56_RS15520;Name=CCO56_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15520;old_locus_tag=CCO56_15520 NZ_NPMB01000007.1 Protein Homology CDS 171392 171928 . - 0 ID=cds-WP_000222158.1;Parent=gene-CCO56_RS15520;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=CCO56_RS15520;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 172077 172745 . + . ID=gene-CCO56_RS15525;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=CCO56_RS15525;old_locus_tag=CCO56_15525 NZ_NPMB01000007.1 Protein Homology CDS 172077 172745 . + 0 ID=cds-WP_001643885.1;Parent=gene-CCO56_RS15525;Dbxref=GenBank:WP_001643885.1;Name=WP_001643885.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=CCO56_RS15525;product=hexitol phosphatase HxpB;protein_id=WP_001643885.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 172883 173482 . + . ID=gene-CCO56_RS15530;Name=CCO56_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15530;old_locus_tag=CCO56_15530 NZ_NPMB01000007.1 Protein Homology CDS 172883 173482 . + 0 ID=cds-WP_000505804.1;Parent=gene-CCO56_RS15530;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=CCO56_RS15530;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 173619 175010 . + . ID=gene-CCO56_RS15535;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=CCO56_RS15535;old_locus_tag=CCO56_15535 NZ_NPMB01000007.1 Protein Homology CDS 173619 175010 . + 0 ID=cds-WP_001010663.1;Parent=gene-CCO56_RS15535;Dbxref=GenBank:WP_001010663.1;Name=WP_001010663.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=CCO56_RS15535;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010663.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 175112 175354 . - . ID=gene-CCO56_RS15540;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=CCO56_RS15540;old_locus_tag=CCO56_15540 NZ_NPMB01000007.1 Protein Homology CDS 175112 175354 . - 0 ID=cds-WP_000977510.1;Parent=gene-CCO56_RS15540;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=CCO56_RS15540;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 175719 177971 . + . ID=gene-CCO56_RS15550;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=CCO56_RS15550;old_locus_tag=CCO56_15550 NZ_NPMB01000007.1 Protein Homology CDS 175719 177971 . + 0 ID=cds-WP_023201471.1;Parent=gene-CCO56_RS15550;Dbxref=GenBank:WP_023201471.1;Name=WP_023201471.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=CCO56_RS15550;product=catalase HPII;protein_id=WP_023201471.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 178015 178773 . - . ID=gene-CCO56_RS15555;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=CCO56_RS15555;old_locus_tag=CCO56_15555 NZ_NPMB01000007.1 Protein Homology CDS 178015 178773 . - 0 ID=cds-WP_000442743.1;Parent=gene-CCO56_RS15555;Dbxref=GenBank:WP_000442743.1;Name=WP_000442743.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=CCO56_RS15555;product=chitin disaccharide deacetylase;protein_id=WP_000442743.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 178786 180141 . - . ID=gene-CCO56_RS15560;Name=CCO56_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15560;old_locus_tag=CCO56_15560 NZ_NPMB01000007.1 Protein Homology CDS 178786 180141 . - 0 ID=cds-WP_000078772.1;Parent=gene-CCO56_RS15560;Dbxref=GenBank:WP_000078772.1;Name=WP_000078772.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=CCO56_RS15560;product=6-phospho-beta-glucosidase;protein_id=WP_000078772.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 180266 181108 . - . ID=gene-CCO56_RS15565;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=CCO56_RS15565;old_locus_tag=CCO56_15565 NZ_NPMB01000007.1 Protein Homology CDS 180266 181108 . - 0 ID=cds-WP_000983393.1;Parent=gene-CCO56_RS15565;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=CCO56_RS15565;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 181119 181466 . - . ID=gene-CCO56_RS15570;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=CCO56_RS15570;old_locus_tag=CCO56_15570 NZ_NPMB01000007.1 Protein Homology CDS 181119 181466 . - 0 ID=cds-WP_000459883.1;Parent=gene-CCO56_RS15570;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=CCO56_RS15570;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 181517 182875 . - . ID=gene-CCO56_RS15575;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=CCO56_RS15575;old_locus_tag=CCO56_15575 NZ_NPMB01000007.1 Protein Homology CDS 181517 182875 . - 0 ID=cds-WP_080176922.1;Parent=gene-CCO56_RS15575;Dbxref=GenBank:WP_080176922.1;Name=WP_080176922.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=CCO56_RS15575;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_080176922.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 182958 183278 . - . ID=gene-CCO56_RS15580;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=CCO56_RS15580;old_locus_tag=CCO56_15580 NZ_NPMB01000007.1 Protein Homology CDS 182958 183278 . - 0 ID=cds-WP_000412161.1;Parent=gene-CCO56_RS15580;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=CCO56_RS15580;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 183579 183920 . - . ID=gene-CCO56_RS15590;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=CCO56_RS15590;old_locus_tag=CCO56_15590 NZ_NPMB01000007.1 Protein Homology CDS 183579 183920 . - 0 ID=cds-WP_001039301.1;Parent=gene-CCO56_RS15590;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=CCO56_RS15590;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 184139 184966 . + . ID=gene-CCO56_RS15595;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CCO56_RS15595;old_locus_tag=CCO56_15595 NZ_NPMB01000007.1 Protein Homology CDS 184139 184966 . + 0 ID=cds-WP_000174982.1;Parent=gene-CCO56_RS15595;Dbxref=GenBank:WP_000174982.1;Name=WP_000174982.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=CCO56_RS15595;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174982.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 185087 185968 . + . ID=gene-CCO56_RS15600;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=CCO56_RS15600;old_locus_tag=CCO56_15600 NZ_NPMB01000007.1 Protein Homology CDS 185087 185968 . + 0 ID=cds-WP_001728969.1;Parent=gene-CCO56_RS15600;Dbxref=GenBank:WP_001728969.1;Name=WP_001728969.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=CCO56_RS15600;product=excinuclease Cho;protein_id=WP_001728969.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 186043 186528 . - . ID=gene-CCO56_RS15605;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=CCO56_RS15605;old_locus_tag=CCO56_15605 NZ_NPMB01000007.1 Protein Homology CDS 186043 186528 . - 0 ID=cds-WP_001228998.1;Parent=gene-CCO56_RS15605;Dbxref=GenBank:WP_001228998.1;Name=WP_001228998.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=CCO56_RS15605;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228998.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 186864 187832 . - . ID=gene-CCO56_RS15615;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=CCO56_RS15615;old_locus_tag=CCO56_15615 NZ_NPMB01000007.1 Protein Homology CDS 186864 187832 . - 0 ID=cds-WP_076165936.1;Parent=gene-CCO56_RS15615;Dbxref=GenBank:WP_076165936.1;Name=WP_076165936.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=CCO56_RS15615;product=succinylglutamate desuccinylase;protein_id=WP_076165936.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 187825 189168 . - . ID=gene-CCO56_RS15620;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=CCO56_RS15620;old_locus_tag=CCO56_15620 NZ_NPMB01000007.1 Protein Homology CDS 187825 189168 . - 0 ID=cds-WP_076165933.1;Parent=gene-CCO56_RS15620;Dbxref=GenBank:WP_076165933.1;Name=WP_076165933.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=CCO56_RS15620;product=N-succinylarginine dihydrolase;protein_id=WP_076165933.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 189165 190643 . - . ID=gene-CCO56_RS15625;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=CCO56_RS15625;old_locus_tag=CCO56_15625 NZ_NPMB01000007.1 Protein Homology CDS 189165 190643 . - 0 ID=cds-WP_000177264.1;Parent=gene-CCO56_RS15625;Dbxref=GenBank:WP_000177264.1;Name=WP_000177264.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=CCO56_RS15625;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177264.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 190640 191674 . - . ID=gene-CCO56_RS15630;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=CCO56_RS15630;old_locus_tag=CCO56_15630 NZ_NPMB01000007.1 Protein Homology CDS 190640 191674 . - 0 ID=cds-WP_001263885.1;Parent=gene-CCO56_RS15630;Dbxref=GenBank:WP_001263885.1;Name=WP_001263885.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=CCO56_RS15630;product=arginine N-succinyltransferase;protein_id=WP_001263885.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 191665 192891 . - . ID=gene-CCO56_RS15635;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=CCO56_RS15635;old_locus_tag=CCO56_15635 NZ_NPMB01000007.1 Protein Homology CDS 191665 192891 . - 0 ID=cds-WP_000059492.1;Parent=gene-CCO56_RS15635;Dbxref=GenBank:WP_000059492.1;Name=WP_000059492.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=CCO56_RS15635;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000059492.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 193337 194143 . + . ID=gene-CCO56_RS15645;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=CCO56_RS15645;old_locus_tag=CCO56_15645 NZ_NPMB01000007.1 Protein Homology CDS 193337 194143 . + 0 ID=cds-WP_000673954.1;Parent=gene-CCO56_RS15645;Dbxref=GenBank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=CCO56_RS15645;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 194216 194632 . + . ID=gene-CCO56_RS15650;Name=CCO56_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15650;old_locus_tag=CCO56_15650 NZ_NPMB01000007.1 Protein Homology CDS 194216 194632 . + 0 ID=cds-WP_000592137.1;Parent=gene-CCO56_RS15650;Dbxref=GenBank:WP_000592137.1;Name=WP_000592137.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=CCO56_RS15650;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592137.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 194592 194867 . - . ID=gene-CCO56_RS15655;Name=CCO56_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15655;old_locus_tag=CCO56_15655 NZ_NPMB01000007.1 Protein Homology CDS 194592 194867 . - 0 ID=cds-WP_000336847.1;Parent=gene-CCO56_RS15655;Dbxref=GenBank:WP_000336847.1;Name=WP_000336847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=CCO56_RS15655;product=YnjH family protein;protein_id=WP_000336847.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 195106 196449 . + . ID=gene-CCO56_RS15660;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=CCO56_RS15660;old_locus_tag=CCO56_15660 NZ_NPMB01000007.1 Protein Homology CDS 195106 196449 . + 0 ID=cds-WP_000372865.1;Parent=gene-CCO56_RS15660;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=CCO56_RS15660;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 196479 198428 . - . ID=gene-CCO56_RS15665;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=CCO56_RS15665;old_locus_tag=CCO56_15665 NZ_NPMB01000007.1 Protein Homology CDS 196479 198428 . - 0 ID=cds-WP_001235862.1;Parent=gene-CCO56_RS15665;Dbxref=GenBank:WP_001235862.1;Name=WP_001235862.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=CCO56_RS15665;product=DNA topoisomerase III;protein_id=WP_001235862.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 198433 199476 . - . ID=gene-CCO56_RS15670;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=CCO56_RS15670;old_locus_tag=CCO56_15670 NZ_NPMB01000007.1 Protein Homology CDS 198433 199476 . - 0 ID=cds-WP_001294900.1;Parent=gene-CCO56_RS15670;Dbxref=GenBank:WP_001294900.1;Name=WP_001294900.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=CCO56_RS15670;product=selenide%2C water dikinase SelD;protein_id=WP_001294900.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 199594 200145 . - . ID=gene-CCO56_RS15680;Name=CCO56_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15680;old_locus_tag=CCO56_15680 NZ_NPMB01000007.1 Protein Homology CDS 199594 200145 . - 0 ID=cds-WP_000339316.1;Parent=gene-CCO56_RS15680;Dbxref=GenBank:WP_000339316.1;Name=WP_000339316.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=CCO56_RS15680;product=NAD(P)H nitroreductase;protein_id=WP_000339316.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 200319 202175 . + . ID=gene-CCO56_RS15690;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CCO56_RS15690;old_locus_tag=CCO56_15690 NZ_NPMB01000007.1 Protein Homology CDS 200319 202175 . + 0 ID=cds-WP_001259863.1;Parent=gene-CCO56_RS15690;Dbxref=GenBank:WP_001259863.1;Name=WP_001259863.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=CCO56_RS15690;product=signal peptide peptidase SppA;protein_id=WP_001259863.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 202271 203287 . + . ID=gene-CCO56_RS15695;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=CCO56_RS15695;old_locus_tag=CCO56_15695 NZ_NPMB01000007.1 Protein Homology CDS 202271 203287 . + 0 ID=cds-WP_001170134.1;Parent=gene-CCO56_RS15695;Dbxref=GenBank:WP_001170134.1;Name=WP_001170134.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=CCO56_RS15695;product=asparaginase;protein_id=WP_001170134.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 203314 203970 . + . ID=gene-CCO56_RS15700;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=CCO56_RS15700;old_locus_tag=CCO56_15700 NZ_NPMB01000007.1 Protein Homology CDS 203314 203970 . + 0 ID=cds-WP_000184705.1;Parent=gene-CCO56_RS15700;Dbxref=GenBank:WP_000184705.1;Name=WP_000184705.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=CCO56_RS15700;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184705.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 204321 204599 . - . ID=gene-CCO56_RS15705;Name=CCO56_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15705;old_locus_tag=CCO56_15705 NZ_NPMB01000007.1 Protein Homology CDS 204321 204599 . - 0 ID=cds-WP_001046864.1;Parent=gene-CCO56_RS15705;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=CCO56_RS15705;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 204641 205054 . - . ID=gene-CCO56_RS15710;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CCO56_RS15710;old_locus_tag=CCO56_15710 NZ_NPMB01000007.1 Protein Homology CDS 204641 205054 . - 0 ID=cds-WP_001519539.1;Parent=gene-CCO56_RS15710;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=CCO56_RS15710;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 205396 206391 . + . ID=gene-CCO56_RS15715;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=CCO56_RS15715;old_locus_tag=CCO56_15715 NZ_NPMB01000007.1 Protein Homology CDS 205396 206391 . + 0 ID=cds-WP_000153505.1;Parent=gene-CCO56_RS15715;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=CCO56_RS15715;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 206720 207604 . + . ID=gene-CCO56_RS15725;Name=CCO56_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15725;old_locus_tag=CCO56_15725 NZ_NPMB01000007.1 Protein Homology CDS 206720 207604 . + 0 ID=cds-WP_000608663.1;Parent=gene-CCO56_RS15725;Dbxref=GenBank:WP_000608663.1;Name=WP_000608663.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=CCO56_RS15725;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608663.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 207703 208560 . - . ID=gene-CCO56_RS15730;Name=CCO56_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15730;old_locus_tag=CCO56_15730 NZ_NPMB01000007.1 Protein Homology CDS 207703 208560 . - 0 ID=cds-WP_080176921.1;Parent=gene-CCO56_RS15730;Dbxref=GenBank:WP_080176921.1;Name=WP_080176921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=CCO56_RS15730;product=aldo/keto reductase;protein_id=WP_080176921.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 208657 209853 . - . ID=gene-CCO56_RS15735;Name=CCO56_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15735;old_locus_tag=CCO56_15735 NZ_NPMB01000007.1 Protein Homology CDS 208657 209853 . - 0 ID=cds-WP_000029250.1;Parent=gene-CCO56_RS15735;Dbxref=GenBank:WP_000029250.1;Name=WP_000029250.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=CCO56_RS15735;product=anaerobic sulfatase maturase;protein_id=WP_000029250.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 210143 210889 . - . ID=gene-CCO56_RS15740;Name=CCO56_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15740;old_locus_tag=CCO56_15740 NZ_NPMB01000007.1 Protein Homology CDS 210143 210889 . - 0 ID=cds-WP_000163762.1;Parent=gene-CCO56_RS15740;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=CCO56_RS15740;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 211316 213250 . + . ID=gene-CCO56_RS15745;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=CCO56_RS15745;old_locus_tag=CCO56_15745 NZ_NPMB01000007.1 Protein Homology CDS 211316 213250 . + 0 ID=cds-WP_001518010.1;Parent=gene-CCO56_RS15745;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=CCO56_RS15745;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 213373 214659 . + . ID=gene-CCO56_RS15750;Name=CCO56_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15750;old_locus_tag=CCO56_15750 NZ_NPMB01000007.1 Protein Homology CDS 213373 214659 . + 0 ID=cds-WP_000219714.1;Parent=gene-CCO56_RS15750;Dbxref=GenBank:WP_000219714.1;Name=WP_000219714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=CCO56_RS15750;product=YeaH/YhbH family protein;protein_id=WP_000219714.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 214809 215015 . - . ID=gene-CCO56_RS23415;Name=CCO56_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23415 NZ_NPMB01000007.1 GeneMarkS-2+ CDS 214809 215015 . - 0 ID=cds-WP_024132288.1;Parent=gene-CCO56_RS23415;Dbxref=GenBank:WP_024132288.1;Name=WP_024132288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS23415;product=hypothetical protein;protein_id=WP_024132288.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 215309 216811 . + . ID=gene-CCO56_RS15755;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=CCO56_RS15755;old_locus_tag=CCO56_15755 NZ_NPMB01000007.1 Protein Homology CDS 215309 216811 . + 0 ID=cds-WP_080177056.1;Parent=gene-CCO56_RS15755;Dbxref=GenBank:WP_080177056.1;Name=WP_080177056.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=CCO56_RS15755;product=diguanylate cyclase DgcJ;protein_id=WP_080177056.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 216861 217379 . + . ID=gene-CCO56_RS15760;Name=CCO56_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15760;old_locus_tag=CCO56_15760 NZ_NPMB01000007.1 Protein Homology CDS 216861 217379 . + 0 ID=cds-WP_162149666.1;Parent=gene-CCO56_RS15760;Dbxref=GenBank:WP_162149666.1;Name=WP_162149666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=CCO56_RS15760;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_162149666.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 217376 217483 . - . ID=gene-CCO56_RS15765;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=CCO56_RS15765;old_locus_tag=CCO56_15765 NZ_NPMB01000007.1 Protein Homology CDS 217376 217483 . - 0 ID=cds-WP_000272232.1;Parent=gene-CCO56_RS15765;Dbxref=GenBank:WP_000272232.1;Name=WP_000272232.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=CCO56_RS15765;product=small membrane protein YoaI;protein_id=WP_000272232.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 217689 218135 . + . ID=gene-CCO56_RS15770;Name=CCO56_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15770;old_locus_tag=CCO56_15770 NZ_NPMB01000007.1 Protein Homology CDS 217689 218135 . + 0 ID=cds-WP_000460698.1;Parent=gene-CCO56_RS15770;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=CCO56_RS15770;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 218115 218909 . - . ID=gene-CCO56_RS15775;Name=CCO56_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15775;old_locus_tag=CCO56_15775 NZ_NPMB01000007.1 Protein Homology CDS 218115 218909 . - 0 ID=cds-WP_094882060.1;Parent=gene-CCO56_RS15775;Dbxref=GenBank:WP_094882060.1;Name=WP_094882060.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=CCO56_RS15775;product=AraC family transcriptional regulator;protein_id=WP_094882060.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 219010 220194 . + . ID=gene-CCO56_RS15780;Name=CCO56_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15780;old_locus_tag=CCO56_15780 NZ_NPMB01000007.1 Protein Homology CDS 219010 220194 . + 0 ID=cds-WP_080177057.1;Parent=gene-CCO56_RS15780;Dbxref=GenBank:WP_080177057.1;Name=WP_080177057.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=CCO56_RS15780;product=CynX/NimT family MFS transporter;protein_id=WP_080177057.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 220315 220662 . + . ID=gene-CCO56_RS15785;Name=CCO56_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15785;old_locus_tag=CCO56_15785 NZ_NPMB01000007.1 Protein Homology CDS 220315 220662 . + 0 ID=cds-WP_063916861.1;Parent=gene-CCO56_RS15785;Dbxref=GenBank:WP_063916861.1;Name=WP_063916861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=CCO56_RS15785;product=DUF488 domain-containing protein;protein_id=WP_063916861.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 220648 220959 . - . ID=gene-CCO56_RS15790;Name=CCO56_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15790;old_locus_tag=CCO56_15790 NZ_NPMB01000007.1 Protein Homology CDS 220648 220959 . - 0 ID=cds-WP_000487129.1;Parent=gene-CCO56_RS15790;Dbxref=GenBank:WP_000487129.1;Name=WP_000487129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=CCO56_RS15790;product=hypothetical protein;protein_id=WP_000487129.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 221028 221279 . - . ID=gene-CCO56_RS15795;Name=CCO56_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15795;old_locus_tag=CCO56_15795 NZ_NPMB01000007.1 Protein Homology CDS 221028 221279 . - 0 ID=cds-WP_000673492.1;Parent=gene-CCO56_RS15795;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=CCO56_RS15795;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 221475 221573 . + . ID=gene-CCO56_RS15800;Name=CCO56_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15800;old_locus_tag=CCO56_15800 NZ_NPMB01000007.1 Protein Homology CDS 221475 221573 . + 0 ID=cds-WP_001589065.1;Parent=gene-CCO56_RS15800;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=CCO56_RS15800;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 221712 221960 . - . ID=gene-CCO56_RS15805;Name=CCO56_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15805;old_locus_tag=CCO56_15805 NZ_NPMB01000007.1 Protein Homology CDS 221712 221960 . - 0 ID=cds-WP_000512149.1;Parent=gene-CCO56_RS15805;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=CCO56_RS15805;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 222274 222915 . - . ID=gene-CCO56_RS15815;Name=CCO56_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15815;old_locus_tag=CCO56_15815 NZ_NPMB01000007.1 Protein Homology CDS 222274 222915 . - 0 ID=cds-WP_000762775.1;Parent=gene-CCO56_RS15815;Dbxref=GenBank:WP_000762775.1;Name=WP_000762775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=CCO56_RS15815;product=hypothetical protein;protein_id=WP_000762775.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 223145 223327 . - . ID=gene-CCO56_RS15820;Name=CCO56_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15820;old_locus_tag=CCO56_15820 NZ_NPMB01000007.1 Protein Homology CDS 223145 223327 . - 0 ID=cds-WP_000513733.1;Parent=gene-CCO56_RS15820;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=CCO56_RS15820;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 223330 223692 . - . ID=gene-CCO56_RS15825;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=CCO56_RS15825;old_locus_tag=CCO56_15825 NZ_NPMB01000007.1 Protein Homology CDS 223330 223692 . - 0 ID=cds-WP_001248994.1;Parent=gene-CCO56_RS15825;Dbxref=GenBank:WP_001248994.1;Name=WP_001248994.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=CCO56_RS15825;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248994.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 223864 224502 . - . ID=gene-CCO56_RS15835;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=CCO56_RS15835;old_locus_tag=CCO56_15835 NZ_NPMB01000007.1 Protein Homology CDS 223864 224502 . - 0 ID=cds-WP_000457190.1;Parent=gene-CCO56_RS15835;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=CCO56_RS15835;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 224699 225244 . - . ID=gene-CCO56_RS15840;Name=CCO56_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15840;old_locus_tag=CCO56_15840 NZ_NPMB01000007.1 Protein Homology CDS 224699 225244 . - 0 ID=cds-WP_000617984.1;Parent=gene-CCO56_RS15840;Dbxref=GenBank:WP_000617984.1;Name=WP_000617984.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=CCO56_RS15840;product=chorismate mutase;protein_id=WP_000617984.1;transl_table=11 NZ_NPMB01000007.1 RefSeq pseudogene 225327 225481 . + . ID=gene-CCO56_RS23835;Name=CCO56_RS23835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23835;old_locus_tag=CCO56_15845;pseudo=true NZ_NPMB01000007.1 Protein Homology CDS 225327 225481 . + 0 ID=cds-CCO56_RS23835;Parent=gene-CCO56_RS23835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=CCO56_RS23835;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 225560 225808 . + . ID=gene-CCO56_RS15850;Name=CCO56_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15850;old_locus_tag=CCO56_15850 NZ_NPMB01000007.1 Protein Homology CDS 225560 225808 . + 0 ID=cds-WP_000208086.1;Parent=gene-CCO56_RS15850;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=CCO56_RS15850;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 226063 226911 . - . ID=gene-CCO56_RS15860;Name=CCO56_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15860;old_locus_tag=CCO56_15860 NZ_NPMB01000007.1 Protein Homology CDS 226063 226911 . - 0 ID=cds-WP_080177058.1;Parent=gene-CCO56_RS15860;Dbxref=GenBank:WP_080177058.1;Name=WP_080177058.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=CCO56_RS15860;product=MerR family transcriptional regulator;protein_id=WP_080177058.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 226980 227573 . - . ID=gene-CCO56_RS15865;Name=CCO56_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15865;old_locus_tag=CCO56_15865 NZ_NPMB01000007.1 Protein Homology CDS 226980 227573 . - 0 ID=cds-WP_072275082.1;Parent=gene-CCO56_RS15865;Dbxref=GenBank:WP_072275082.1;Name=WP_072275082.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=CCO56_RS15865;product=helix-turn-helix domain-containing protein;protein_id=WP_072275082.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 227718 228506 . - . ID=gene-CCO56_RS15870;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=CCO56_RS15870;old_locus_tag=CCO56_15870 NZ_NPMB01000007.1 Protein Homology CDS 227718 228506 . - 0 ID=cds-WP_080177059.1;Parent=gene-CCO56_RS15870;Dbxref=GenBank:WP_080177059.1;Name=WP_080177059.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=CCO56_RS15870;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_080177059.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 228615 229262 . - . ID=gene-CCO56_RS15875;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=CCO56_RS15875;old_locus_tag=CCO56_15875 NZ_NPMB01000007.1 Protein Homology CDS 228615 229262 . - 0 ID=cds-WP_001537483.1;Parent=gene-CCO56_RS15875;Dbxref=GenBank:WP_001537483.1;Name=WP_001537483.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=CCO56_RS15875;product=metal-binding protein ZinT;protein_id=WP_001537483.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 229374 229450 . - . ID=gene-CCO56_RS15880;Name=CCO56_RS15880;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS15880;old_locus_tag=CCO56_15880 NZ_NPMB01000007.1 tRNAscan-SE tRNA 229374 229450 . - . ID=rna-CCO56_RS15880;Parent=gene-CCO56_RS15880;anticodon=(pos:complement(229414..229416));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS15880;product=tRNA-Arg NZ_NPMB01000007.1 tRNAscan-SE exon 229374 229450 . - . ID=exon-CCO56_RS15880-1;Parent=rna-CCO56_RS15880;anticodon=(pos:complement(229414..229416));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS15880;product=tRNA-Arg NZ_NPMB01000007.1 RefSeq gene 229459 229785 . - . ID=gene-CCO56_RS15885;Name=CCO56_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15885;old_locus_tag=CCO56_15885 NZ_NPMB01000007.1 Protein Homology CDS 229459 229785 . - 0 ID=cds-WP_001183699.1;Parent=gene-CCO56_RS15885;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=CCO56_RS15885;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 229979 231112 . + . ID=gene-CCO56_RS15890;Name=CCO56_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15890;old_locus_tag=CCO56_15890 NZ_NPMB01000007.1 Protein Homology CDS 229979 231112 . + 0 ID=cds-WP_023208124.1;Parent=gene-CCO56_RS15890;Dbxref=GenBank:WP_023208124.1;Name=WP_023208124.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=CCO56_RS15890;product=mechanosensitive ion channel family protein;protein_id=WP_023208124.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 231194 231784 . - . ID=gene-CCO56_RS15895;Name=CCO56_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15895;old_locus_tag=CCO56_15895 NZ_NPMB01000007.1 Protein Homology CDS 231194 231784 . - 0 ID=cds-WP_000947460.1;Parent=gene-CCO56_RS15895;Dbxref=GenBank:WP_000947460.1;Name=WP_000947460.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=CCO56_RS15895;product=ATP-binding cassette domain-containing protein;protein_id=WP_000947460.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 231778 232575 . - . ID=gene-CCO56_RS15900;Name=CCO56_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15900;old_locus_tag=CCO56_15900 NZ_NPMB01000007.1 Protein Homology CDS 231778 232575 . - 0 ID=cds-WP_001633202.1;Parent=gene-CCO56_RS15900;Dbxref=GenBank:WP_001633202.1;Name=WP_001633202.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=CCO56_RS15900;product=ATP-binding cassette domain-containing protein;protein_id=WP_001633202.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 232569 233381 . - . ID=gene-CCO56_RS15905;Name=CCO56_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15905;old_locus_tag=CCO56_15905 NZ_NPMB01000007.1 Protein Homology CDS 232569 233381 . - 0 ID=cds-WP_000966647.1;Parent=gene-CCO56_RS15905;Dbxref=GenBank:WP_000966647.1;Name=WP_000966647.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=CCO56_RS15905;product=ABC transporter permease;protein_id=WP_000966647.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 233371 234345 . - . ID=gene-CCO56_RS15910;Name=CCO56_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15910;old_locus_tag=CCO56_15910 NZ_NPMB01000007.1 Protein Homology CDS 233371 234345 . - 0 ID=cds-WP_001529169.1;Parent=gene-CCO56_RS15910;Dbxref=GenBank:WP_001529169.1;Name=WP_001529169.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=CCO56_RS15910;product=ABC transporter permease;protein_id=WP_001529169.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 234345 235979 . - . ID=gene-CCO56_RS15915;Name=CCO56_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15915;old_locus_tag=CCO56_15915 NZ_NPMB01000007.1 Protein Homology CDS 234345 235979 . - 0 ID=cds-WP_001644622.1;Parent=gene-CCO56_RS15915;Dbxref=GenBank:WP_001644622.1;Name=WP_001644622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=CCO56_RS15915;product=ABC transporter substrate-binding protein;protein_id=WP_001644622.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 236660 236974 . + . ID=gene-CCO56_RS15920;Name=CCO56_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15920;old_locus_tag=CCO56_15920 NZ_NPMB01000007.1 Protein Homology CDS 236660 236974 . + 0 ID=cds-WP_000182479.1;Parent=gene-CCO56_RS15920;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=CCO56_RS15920;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 237123 237653 . + . ID=gene-CCO56_RS15925;Name=CCO56_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15925;old_locus_tag=CCO56_15925 NZ_NPMB01000007.1 Protein Homology CDS 237123 237653 . + 0 ID=cds-WP_000929971.1;Parent=gene-CCO56_RS15925;Dbxref=GenBank:WP_000929971.1;Name=WP_000929971.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=CCO56_RS15925;product=cytochrome b;protein_id=WP_000929971.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 237736 238779 . - . ID=gene-CCO56_RS15930;Name=CCO56_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15930;old_locus_tag=CCO56_15930 NZ_NPMB01000007.1 Protein Homology CDS 237736 238779 . - 0 ID=cds-WP_000761731.1;Parent=gene-CCO56_RS15930;Dbxref=GenBank:WP_000761731.1;Name=WP_000761731.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=CCO56_RS15930;product=sialidase family protein;protein_id=WP_000761731.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 239118 239585 . - . ID=gene-CCO56_RS15935;Name=CCO56_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15935;old_locus_tag=CCO56_15935 NZ_NPMB01000007.1 Protein Homology CDS 239118 239585 . - 0 ID=cds-WP_001218117.1;Parent=gene-CCO56_RS15935;Dbxref=GenBank:WP_001218117.1;Name=WP_001218117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=CCO56_RS15935;product=Hsp20 family protein;protein_id=WP_001218117.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 239783 240010 . - . ID=gene-CCO56_RS15940;Name=CCO56_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15940;old_locus_tag=CCO56_15940 NZ_NPMB01000007.1 Protein Homology CDS 239783 240010 . - 0 ID=cds-WP_077906426.1;Parent=gene-CCO56_RS15940;Dbxref=GenBank:WP_077906426.1;Name=WP_077906426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=CCO56_RS15940;product=hypothetical protein;protein_id=WP_077906426.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 240222 240347 . - . ID=gene-CCO56_RS23980;Name=CCO56_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23980;old_locus_tag=CCO56_15945 NZ_NPMB01000007.1 Protein Homology CDS 240222 240347 . - 0 ID=cds-WP_000758944.1;Parent=gene-CCO56_RS23980;Dbxref=GenBank:WP_000758944.1;Name=WP_000758944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000758943.1;locus_tag=CCO56_RS23980;product=hypothetical protein;protein_id=WP_000758944.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 240725 241069 . + . ID=gene-CCO56_RS15950;Name=CCO56_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15950;old_locus_tag=CCO56_15950 NZ_NPMB01000007.1 Protein Homology CDS 240725 241069 . + 0 ID=cds-WP_000977720.1;Parent=gene-CCO56_RS15950;Dbxref=GenBank:WP_000977720.1;Name=WP_000977720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=CCO56_RS15950;product=c-type lysozyme inhibitor;protein_id=WP_000977720.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 241824 241900 . - . ID=gene-CCO56_RS15955;Name=CCO56_RS15955;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS15955;old_locus_tag=CCO56_15955 NZ_NPMB01000007.1 tRNAscan-SE tRNA 241824 241900 . - . ID=rna-CCO56_RS15955;Parent=gene-CCO56_RS15955;anticodon=(pos:complement(241864..241866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS15955;product=tRNA-Arg NZ_NPMB01000007.1 tRNAscan-SE exon 241824 241900 . - . ID=exon-CCO56_RS15955-1;Parent=rna-CCO56_RS15955;anticodon=(pos:complement(241864..241866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS15955;product=tRNA-Arg NZ_NPMB01000007.1 RefSeq gene 242306 242863 . - . ID=gene-CCO56_RS15960;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=CCO56_RS15960;old_locus_tag=CCO56_15960 NZ_NPMB01000007.1 Protein Homology CDS 242306 242863 . - 0 ID=cds-WP_000789469.1;Parent=gene-CCO56_RS15960;Dbxref=GenBank:WP_000789469.1;Name=WP_000789469.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=CCO56_RS15960;product=virulence membrane protein PagC;protein_id=WP_000789469.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 243672 243935 . + . ID=gene-CCO56_RS15975;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=CCO56_RS15975;old_locus_tag=CCO56_15975 NZ_NPMB01000007.1 Protein Homology CDS 243672 243935 . + 0 ID=cds-WP_001531085.1;Parent=gene-CCO56_RS15975;Dbxref=GenBank:WP_001531085.1;Name=WP_001531085.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=CCO56_RS15975;product=virulence protein PagD;protein_id=WP_001531085.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 244067 244279 . + . ID=gene-CCO56_RS15980;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=CCO56_RS15980;old_locus_tag=CCO56_15980 NZ_NPMB01000007.1 Protein Homology CDS 244067 244279 . + 0 ID=cds-WP_001529140.1;Parent=gene-CCO56_RS15980;Dbxref=GenBank:WP_001529140.1;Name=WP_001529140.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=CCO56_RS15980;product=cold shock-like protein CspH;protein_id=WP_001529140.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 244698 245219 . + . ID=gene-CCO56_RS15985;Name=CCO56_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS15985;old_locus_tag=CCO56_15985 NZ_NPMB01000007.1 Protein Homology CDS 244698 245219 . + 0 ID=cds-WP_024146692.1;Parent=gene-CCO56_RS15985;Dbxref=GenBank:WP_024146692.1;Name=WP_024146692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=CCO56_RS15985;product=ricin-type beta-trefoil lectin domain protein;protein_id=WP_024146692.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 245410 245649 . + . ID=gene-CCO56_RS15990;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=CCO56_RS15990;old_locus_tag=CCO56_15990 NZ_NPMB01000007.1 Protein Homology CDS 245410 245649 . + 0 ID=cds-WP_000497451.1;Parent=gene-CCO56_RS15990;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=CCO56_RS15990;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11 NZ_NPMB01000007.1 RefSeq pseudogene 245802 245885 . - . ID=gene-CCO56_RS24180;Name=CCO56_RS24180;end_range=245885,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24180;partial=true;pseudo=true;start_range=.,245802 NZ_NPMB01000007.1 Protein Homology CDS 245802 245885 . - 0 ID=cds-CCO56_RS24180;Parent=gene-CCO56_RS24180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=245885,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052685.1;locus_tag=CCO56_RS24180;partial=true;product=hypothetical protein;pseudo=true;start_range=.,245802;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 245860 246024 . - . ID=gene-CCO56_RS23540;Name=CCO56_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23540;old_locus_tag=CCO56_15995 NZ_NPMB01000007.1 GeneMarkS-2+ CDS 245860 246024 . - 0 ID=cds-WP_057515228.1;Parent=gene-CCO56_RS23540;Dbxref=GenBank:WP_057515228.1;Name=WP_057515228.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS23540;product=hypothetical protein;protein_id=WP_057515228.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 246522 247331 . + . ID=gene-CCO56_RS16000;Name=cdtB;gbkey=Gene;gene=cdtB;gene_biotype=protein_coding;locus_tag=CCO56_RS16000;old_locus_tag=CCO56_16000 NZ_NPMB01000007.1 Protein Homology CDS 246522 247331 . + 0 ID=cds-WP_080177070.1;Parent=gene-CCO56_RS16000;Dbxref=GenBank:WP_080177070.1;Name=WP_080177070.1;gbkey=CDS;gene=cdtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529135.1;locus_tag=CCO56_RS16000;product=cytolethal distending toxin S-CDT;protein_id=WP_080177070.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 247404 247781 . + . ID=gene-CCO56_RS16005;Name=CCO56_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16005;old_locus_tag=CCO56_16005 NZ_NPMB01000007.1 Protein Homology CDS 247404 247781 . + 0 ID=cds-WP_001277616.1;Parent=gene-CCO56_RS16005;Dbxref=GenBank:WP_001277616.1;Name=WP_001277616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277616.1;locus_tag=CCO56_RS16005;product=DUF1353 domain-containing protein;protein_id=WP_001277616.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 247930 248472 . - . ID=gene-CCO56_RS16010;Name=CCO56_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16010;old_locus_tag=CCO56_16010 NZ_NPMB01000007.1 Protein Homology CDS 247930 248472 . - 0 ID=cds-WP_000158845.1;Parent=gene-CCO56_RS16010;Dbxref=GenBank:WP_000158845.1;Name=WP_000158845.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016429.1;locus_tag=CCO56_RS16010;product=glycoside hydrolase family 108 protein;protein_id=WP_000158845.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 248656 249384 . - . ID=gene-CCO56_RS16015;Name=pltA;gbkey=Gene;gene=pltA;gene_biotype=protein_coding;locus_tag=CCO56_RS16015;old_locus_tag=CCO56_16015 NZ_NPMB01000007.1 Protein Homology CDS 248656 249384 . - 0 ID=cds-WP_000733630.1;Parent=gene-CCO56_RS16015;Dbxref=GenBank:WP_000733630.1;Name=WP_000733630.1;gbkey=CDS;gene=pltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766395.1;locus_tag=CCO56_RS16015;product=typhoid-like toxin S-CDT ADP-ribosylating subunit PltA;protein_id=WP_000733630.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 249401 249814 . - . ID=gene-CCO56_RS16020;Name=pltB;gbkey=Gene;gene=pltB;gene_biotype=protein_coding;locus_tag=CCO56_RS16020;old_locus_tag=CCO56_16020 NZ_NPMB01000007.1 Protein Homology CDS 249401 249814 . - 0 ID=cds-WP_080177060.1;Parent=gene-CCO56_RS16020;Dbxref=GenBank:WP_080177060.1;Name=WP_080177060.1;gbkey=CDS;gene=pltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281950.1;locus_tag=CCO56_RS16020;product=typhoid-like toxin S-CDT binding subunit PltB;protein_id=WP_080177060.1;transl_table=11 NZ_NPMB01000007.1 RefSeq pseudogene 250426 250571 . + . ID=gene-CCO56_RS23840;Name=CCO56_RS23840;end_range=250571,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23840;partial=true;pseudo=true NZ_NPMB01000007.1 Protein Homology CDS 250426 250571 . + 0 ID=cds-CCO56_RS23840;Parent=gene-CCO56_RS23840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=250571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=CCO56_RS23840;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_NPMB01000007.1 RefSeq pseudogene 250588 250668 . - . ID=gene-CCO56_RS23845;Name=CCO56_RS23845;end_range=250668,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23845;partial=true;pseudo=true NZ_NPMB01000007.1 Protein Homology CDS 250588 250668 . - 0 ID=cds-CCO56_RS23845;Parent=gene-CCO56_RS23845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=250668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505044.1;locus_tag=CCO56_RS23845;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 250859 251983 . - . ID=gene-CCO56_RS16030;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=CCO56_RS16030;old_locus_tag=CCO56_16030 NZ_NPMB01000007.1 Protein Homology CDS 250859 251983 . - 0 ID=cds-WP_000917280.1;Parent=gene-CCO56_RS16030;Dbxref=GenBank:WP_000917280.1;Name=WP_000917280.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=CCO56_RS16030;product=type III secretion system effector SopF;protein_id=WP_000917280.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 252429 253679 . - . ID=gene-CCO56_RS16035;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CCO56_RS16035;old_locus_tag=CCO56_16035 NZ_NPMB01000007.1 Protein Homology CDS 252429 253679 . - 0 ID=cds-WP_000444506.1;Parent=gene-CCO56_RS16035;Dbxref=GenBank:WP_000444506.1;Name=WP_000444506.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=CCO56_RS16035;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444506.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 253851 254516 . + . ID=gene-CCO56_RS16040;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=CCO56_RS16040;old_locus_tag=CCO56_16040 NZ_NPMB01000007.1 Protein Homology CDS 253851 254516 . + 0 ID=cds-WP_001249416.1;Parent=gene-CCO56_RS16040;Dbxref=GenBank:WP_001249416.1;Name=WP_001249416.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=CCO56_RS16040;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249416.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 254513 254842 . + . ID=gene-CCO56_RS16045;Name=CCO56_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16045;old_locus_tag=CCO56_16045 NZ_NPMB01000007.1 Protein Homology CDS 254513 254842 . + 0 ID=cds-WP_000825956.1;Parent=gene-CCO56_RS16045;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=CCO56_RS16045;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 254854 255315 . + . ID=gene-CCO56_RS16050;Name=CCO56_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16050;old_locus_tag=CCO56_16050 NZ_NPMB01000007.1 Protein Homology CDS 254854 255315 . + 0 ID=cds-WP_000476063.1;Parent=gene-CCO56_RS16050;Dbxref=GenBank:WP_000476063.1;Name=WP_000476063.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=CCO56_RS16050;product=NUDIX hydrolase;protein_id=WP_000476063.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 255369 256475 . + . ID=gene-CCO56_RS16055;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=CCO56_RS16055;old_locus_tag=CCO56_16055 NZ_NPMB01000007.1 Protein Homology CDS 255369 256475 . + 0 ID=cds-WP_001293799.1;Parent=gene-CCO56_RS16055;Dbxref=GenBank:WP_001293799.1;Name=WP_001293799.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=CCO56_RS16055;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_001293799.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 256562 257203 . + . ID=gene-CCO56_RS16060;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=CCO56_RS16060;old_locus_tag=CCO56_16060 NZ_NPMB01000007.1 Protein Homology CDS 256562 257203 . + 0 ID=cds-WP_001519653.1;Parent=gene-CCO56_RS16060;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=CCO56_RS16060;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 257207 258577 . + . ID=gene-CCO56_RS16065;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CCO56_RS16065;old_locus_tag=CCO56_16065 NZ_NPMB01000007.1 Protein Homology CDS 257207 258577 . + 0 ID=cds-WP_000423764.1;Parent=gene-CCO56_RS16065;Dbxref=GenBank:WP_000423764.1;Name=WP_000423764.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=CCO56_RS16065;product=adenylosuccinate lyase;protein_id=WP_000423764.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 258704 259375 . + . ID=gene-CCO56_RS16070;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=CCO56_RS16070;old_locus_tag=CCO56_16070 NZ_NPMB01000007.1 Protein Homology CDS 258704 259375 . + 0 ID=cds-WP_001537766.1;Parent=gene-CCO56_RS16070;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=CCO56_RS16070;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 259375 260838 . + . ID=gene-CCO56_RS16075;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=CCO56_RS16075;old_locus_tag=CCO56_16075 NZ_NPMB01000007.1 Protein Homology CDS 259375 260838 . + 0 ID=cds-WP_001031687.1;Parent=gene-CCO56_RS16075;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=CCO56_RS16075;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 260919 262040 . + . ID=gene-CCO56_RS16080;Name=CCO56_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16080;old_locus_tag=CCO56_16080 NZ_NPMB01000007.1 Protein Homology CDS 260919 262040 . + 0 ID=cds-WP_080177061.1;Parent=gene-CCO56_RS16080;Dbxref=GenBank:WP_080177061.1;Name=WP_080177061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=CCO56_RS16080;product=cupin domain-containing protein;protein_id=WP_080177061.1;transl_table=11 NZ_NPMB01000007.1 RefSeq pseudogene 262079 262465 . - . ID=gene-CCO56_RS16085;Name=CCO56_RS16085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS16085;old_locus_tag=CCO56_16085;partial=true;pseudo=true;start_range=.,262079 NZ_NPMB01000007.1 Protein Homology CDS 262079 262465 . - 0 ID=cds-CCO56_RS16085;Parent=gene-CCO56_RS16085;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=CCO56_RS16085;partial=true;product=hypothetical protein;pseudo=true;start_range=.,262079;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 262469 263698 . - . ID=gene-CCO56_RS16090;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CCO56_RS16090;old_locus_tag=CCO56_16090 NZ_NPMB01000007.1 Protein Homology CDS 262469 263698 . - 0 ID=cds-WP_000359412.1;Parent=gene-CCO56_RS16090;Dbxref=GenBank:WP_000359412.1;Name=WP_000359412.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=CCO56_RS16090;product=peptidase T;protein_id=WP_000359412.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 263949 265085 . + . ID=gene-CCO56_RS16100;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=CCO56_RS16100;old_locus_tag=CCO56_16100 NZ_NPMB01000007.1 Protein Homology CDS 263949 265085 . + 0 ID=cds-WP_000531582.1;Parent=gene-CCO56_RS16100;Dbxref=GenBank:WP_000531582.1;Name=WP_000531582.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=CCO56_RS16100;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531582.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 265069 265932 . + . ID=gene-CCO56_RS16105;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=CCO56_RS16105;old_locus_tag=CCO56_16105 NZ_NPMB01000007.1 Protein Homology CDS 265069 265932 . + 0 ID=cds-WP_000799391.1;Parent=gene-CCO56_RS16105;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=CCO56_RS16105;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 266261 267271 . + . ID=gene-CCO56_RS16110;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=CCO56_RS16110;old_locus_tag=CCO56_16110 NZ_NPMB01000007.1 Protein Homology CDS 266261 267271 . + 0 ID=cds-WP_001531091.1;Parent=gene-CCO56_RS16110;Dbxref=GenBank:WP_001531091.1;Name=WP_001531091.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=CCO56_RS16110;product=SPI-2 type III secretion system effector SifA;protein_id=WP_001531091.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 267587 268366 . + . ID=gene-CCO56_RS16115;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=CCO56_RS16115;old_locus_tag=CCO56_16115 NZ_NPMB01000007.1 Protein Homology CDS 267587 268366 . + 0 ID=cds-WP_000580299.1;Parent=gene-CCO56_RS16115;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=CCO56_RS16115;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 268391 269437 . + . ID=gene-CCO56_RS16120;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=CCO56_RS16120;old_locus_tag=CCO56_16120 NZ_NPMB01000007.1 Protein Homology CDS 268391 269437 . + 0 ID=cds-WP_000759329.1;Parent=gene-CCO56_RS16120;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=CCO56_RS16120;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 269519 270340 . - . ID=gene-CCO56_RS16125;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=CCO56_RS16125;old_locus_tag=CCO56_16125 NZ_NPMB01000007.1 Protein Homology CDS 269519 270340 . - 0 ID=cds-WP_001191856.1;Parent=gene-CCO56_RS16125;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=CCO56_RS16125;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 270359 271270 . - . ID=gene-CCO56_RS16130;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=CCO56_RS16130;old_locus_tag=CCO56_16130 NZ_NPMB01000007.1 Protein Homology CDS 270359 271270 . - 0 ID=cds-WP_080177062.1;Parent=gene-CCO56_RS16130;Dbxref=GenBank:WP_080177062.1;Name=WP_080177062.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=CCO56_RS16130;product=N-acetylglucosamine kinase;protein_id=WP_080177062.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 271299 272543 . - . ID=gene-CCO56_RS16135;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=CCO56_RS16135;old_locus_tag=CCO56_16135 NZ_NPMB01000007.1 Protein Homology CDS 271299 272543 . - 0 ID=cds-WP_000168091.1;Parent=gene-CCO56_RS16135;Dbxref=GenBank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=CCO56_RS16135;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 272543 273244 . - . ID=gene-CCO56_RS16140;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=CCO56_RS16140;old_locus_tag=CCO56_16140 NZ_NPMB01000007.1 Protein Homology CDS 272543 273244 . - 0 ID=cds-WP_001033714.1;Parent=gene-CCO56_RS16140;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=CCO56_RS16140;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 273237 274436 . - . ID=gene-CCO56_RS16145;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=CCO56_RS16145;old_locus_tag=CCO56_16145 NZ_NPMB01000007.1 Protein Homology CDS 273237 274436 . - 0 ID=cds-WP_001518787.1;Parent=gene-CCO56_RS16145;Dbxref=GenBank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=CCO56_RS16145;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 274774 278220 . + . ID=gene-CCO56_RS16150;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CCO56_RS16150;old_locus_tag=CCO56_16150 NZ_NPMB01000007.1 Protein Homology CDS 274774 278220 . + 0 ID=cds-WP_001114323.1;Parent=gene-CCO56_RS16150;Dbxref=GenBank:WP_001114323.1;Name=WP_001114323.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=CCO56_RS16150;product=transcription-repair coupling factor;protein_id=WP_001114323.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 278368 279333 . + . ID=gene-CCO56_RS16155;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=CCO56_RS16155;old_locus_tag=CCO56_16155 NZ_NPMB01000007.1 Protein Homology CDS 278368 279333 . + 0 ID=cds-WP_000482962.1;Parent=gene-CCO56_RS16155;Dbxref=GenBank:WP_000482962.1;Name=WP_000482962.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=CCO56_RS16155;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482962.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 279430 279687 . - . ID=gene-CCO56_RS16160;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=CCO56_RS16160;old_locus_tag=CCO56_16160 NZ_NPMB01000007.1 Protein Homology CDS 279430 279687 . - 0 ID=cds-WP_000800161.1;Parent=gene-CCO56_RS16160;Dbxref=GenBank:WP_000800161.1;Name=WP_000800161.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=CCO56_RS16160;product=multiple stress resistance protein BhsA;protein_id=WP_000800161.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 279929 280564 . + . ID=gene-CCO56_RS16165;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=CCO56_RS16165;old_locus_tag=CCO56_16165 NZ_NPMB01000007.1 Protein Homology CDS 279929 280564 . + 0 ID=cds-WP_000205986.1;Parent=gene-CCO56_RS16165;Dbxref=GenBank:WP_000205986.1;Name=WP_000205986.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=CCO56_RS16165;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205986.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 280638 281177 . - . ID=gene-CCO56_RS16170;Name=CCO56_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16170;old_locus_tag=CCO56_16170 NZ_NPMB01000007.1 Protein Homology CDS 280638 281177 . - 0 ID=cds-WP_001043449.1;Parent=gene-CCO56_RS16170;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=CCO56_RS16170;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 281356 282660 . - . ID=gene-CCO56_RS16175;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=CCO56_RS16175;old_locus_tag=CCO56_16175 NZ_NPMB01000007.1 Protein Homology CDS 281356 282660 . - 0 ID=cds-WP_000211053.1;Parent=gene-CCO56_RS16175;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=CCO56_RS16175;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 282915 283457 . - . ID=gene-CCO56_RS16180;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=CCO56_RS16180;old_locus_tag=CCO56_16180 NZ_NPMB01000007.1 Protein Homology CDS 282915 283457 . - 0 ID=cds-WP_000587945.1;Parent=gene-CCO56_RS16180;Dbxref=GenBank:WP_000587945.1;Name=WP_000587945.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=CCO56_RS16180;product=alpha/beta hydrolase YcfP;protein_id=WP_000587945.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 283482 284507 . - . ID=gene-CCO56_RS16185;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=CCO56_RS16185;old_locus_tag=CCO56_16185 NZ_NPMB01000007.1 Protein Homology CDS 283482 284507 . - 0 ID=cds-WP_080177063.1;Parent=gene-CCO56_RS16185;Dbxref=GenBank:WP_080177063.1;Name=WP_080177063.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=CCO56_RS16185;product=beta-N-acetylhexosaminidase;protein_id=WP_080177063.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 284518 285342 . - . ID=gene-CCO56_RS16190;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=CCO56_RS16190;old_locus_tag=CCO56_16190 NZ_NPMB01000007.1 Protein Homology CDS 284518 285342 . - 0 ID=cds-WP_001257338.1;Parent=gene-CCO56_RS16190;Dbxref=GenBank:WP_001257338.1;Name=WP_001257338.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=CCO56_RS16190;product=thiamine kinase;protein_id=WP_001257338.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 285323 285961 . - . ID=gene-CCO56_RS16195;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=CCO56_RS16195;old_locus_tag=CCO56_16195 NZ_NPMB01000007.1 Protein Homology CDS 285323 285961 . - 0 ID=cds-WP_000164359.1;Parent=gene-CCO56_RS16195;Dbxref=GenBank:WP_000164359.1;Name=WP_000164359.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=CCO56_RS16195;product=penicillin-binding protein activator LpoB;protein_id=WP_000164359.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 285975 286349 . - . ID=gene-CCO56_RS16200;Name=CCO56_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16200;old_locus_tag=CCO56_16200 NZ_NPMB01000007.1 Protein Homology CDS 285975 286349 . - 0 ID=cds-WP_000589563.1;Parent=gene-CCO56_RS16200;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=CCO56_RS16200;product=YcfL family protein;protein_id=WP_000589563.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 286352 286711 . - . ID=gene-CCO56_RS16205;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=CCO56_RS16205;old_locus_tag=CCO56_16205 NZ_NPMB01000007.1 Protein Homology CDS 286352 286711 . - 0 ID=cds-WP_001532068.1;Parent=gene-CCO56_RS16205;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=CCO56_RS16205;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 287053 289227 . + . ID=gene-CCO56_RS16210;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=CCO56_RS16210;old_locus_tag=CCO56_16210 NZ_NPMB01000007.1 Protein Homology CDS 287053 289227 . + 0 ID=cds-WP_000008418.1;Parent=gene-CCO56_RS16210;Dbxref=GenBank:WP_000008418.1;Name=WP_000008418.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=CCO56_RS16210;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_000008418.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 289312 290745 . - . ID=gene-CCO56_RS16215;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CCO56_RS16215;old_locus_tag=CCO56_16215 NZ_NPMB01000007.1 Protein Homology CDS 289312 290745 . - 0 ID=cds-WP_000475705.1;Parent=gene-CCO56_RS16215;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=CCO56_RS16215;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 291040 291837 . - . ID=gene-CCO56_RS16220;Name=CCO56_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16220;old_locus_tag=CCO56_16220 NZ_NPMB01000007.1 Protein Homology CDS 291040 291837 . - 0 ID=cds-WP_000480268.1;Parent=gene-CCO56_RS16220;Dbxref=GenBank:WP_000480268.1;Name=WP_000480268.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=CCO56_RS16220;product=metal-dependent hydrolase;protein_id=WP_000480268.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 291848 292852 . - . ID=gene-CCO56_RS16225;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=CCO56_RS16225;old_locus_tag=CCO56_16225 NZ_NPMB01000007.1 Protein Homology CDS 291848 292852 . - 0 ID=cds-WP_000872450.1;Parent=gene-CCO56_RS16225;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=CCO56_RS16225;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 292849 293490 . - . ID=gene-CCO56_RS16230;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CCO56_RS16230;old_locus_tag=CCO56_16230 NZ_NPMB01000007.1 Protein Homology CDS 292849 293490 . - 0 ID=cds-WP_000535399.1;Parent=gene-CCO56_RS16230;Dbxref=GenBank:WP_000535399.1;Name=WP_000535399.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=CCO56_RS16230;product=dTMP kinase;protein_id=WP_000535399.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 293480 294502 . - . ID=gene-CCO56_RS16235;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=CCO56_RS16235;old_locus_tag=CCO56_16235 NZ_NPMB01000007.1 Protein Homology CDS 293480 294502 . - 0 ID=cds-WP_000736471.1;Parent=gene-CCO56_RS16235;Dbxref=GenBank:WP_000736471.1;Name=WP_000736471.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=CCO56_RS16235;product=cell division protein YceG;protein_id=WP_000736471.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 294505 295314 . - . ID=gene-CCO56_RS16240;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=CCO56_RS16240;old_locus_tag=CCO56_16240 NZ_NPMB01000007.1 Protein Homology CDS 294505 295314 . - 0 ID=cds-WP_000280842.1;Parent=gene-CCO56_RS16240;Dbxref=GenBank:WP_000280842.1;Name=WP_000280842.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=CCO56_RS16240;product=aminodeoxychorismate lyase;protein_id=WP_000280842.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 295729 296271 . + . ID=gene-CCO56_RS16245;Name=CCO56_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16245;old_locus_tag=CCO56_16245 NZ_NPMB01000007.1 Protein Homology CDS 295729 296271 . + 0 ID=cds-WP_000676518.1;Parent=gene-CCO56_RS16245;Dbxref=GenBank:WP_000676518.1;Name=WP_000676518.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405985.1;locus_tag=CCO56_RS16245;product=fimbrial protein;protein_id=WP_000676518.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 296347 297024 . + . ID=gene-CCO56_RS16250;Name=CCO56_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16250;old_locus_tag=CCO56_16250 NZ_NPMB01000007.1 Protein Homology CDS 296347 297024 . + 0 ID=cds-WP_001046428.1;Parent=gene-CCO56_RS16250;Dbxref=GenBank:WP_001046428.1;Name=WP_001046428.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046428.1;locus_tag=CCO56_RS16250;product=fimbrial biogenesis chaperone;protein_id=WP_001046428.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 297048 299603 . + . ID=gene-CCO56_RS16255;Name=CCO56_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16255;old_locus_tag=CCO56_16255 NZ_NPMB01000007.1 Protein Homology CDS 297048 299603 . + 0 ID=cds-WP_080177064.1;Parent=gene-CCO56_RS16255;Dbxref=GenBank:WP_080177064.1;Name=WP_080177064.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990584.1;locus_tag=CCO56_RS16255;product=fimbria/pilus outer membrane usher protein;protein_id=WP_080177064.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 299641 300639 . + . ID=gene-CCO56_RS16260;Name=CCO56_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16260;old_locus_tag=CCO56_16260 NZ_NPMB01000007.1 Protein Homology CDS 299641 300639 . + 0 ID=cds-WP_001529127.1;Parent=gene-CCO56_RS16260;Dbxref=GenBank:WP_001529127.1;Name=WP_001529127.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754357.1;locus_tag=CCO56_RS16260;product=fimbrial protein;protein_id=WP_001529127.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 300652 301173 . + . ID=gene-CCO56_RS16265;Name=CCO56_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16265;old_locus_tag=CCO56_16265 NZ_NPMB01000007.1 Protein Homology CDS 300652 301173 . + 0 ID=cds-WP_176207676.1;Parent=gene-CCO56_RS16265;Dbxref=GenBank:WP_176207676.1;Name=WP_176207676.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012513009.1;locus_tag=CCO56_RS16265;product=fimbrial protein;protein_id=WP_176207676.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 301188 301712 . + . ID=gene-CCO56_RS16270;Name=CCO56_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16270;old_locus_tag=CCO56_16270 NZ_NPMB01000007.1 Protein Homology CDS 301188 301712 . + 0 ID=cds-WP_000068580.1;Parent=gene-CCO56_RS16270;Dbxref=GenBank:WP_000068580.1;Name=WP_000068580.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068580.1;locus_tag=CCO56_RS16270;product=fimbrial protein;protein_id=WP_000068580.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 301783 303024 . - . ID=gene-CCO56_RS16275;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CCO56_RS16275;old_locus_tag=CCO56_16275 NZ_NPMB01000007.1 Protein Homology CDS 301783 303024 . - 0 ID=cds-WP_000044666.1;Parent=gene-CCO56_RS16275;Dbxref=GenBank:WP_000044666.1;Name=WP_000044666.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=CCO56_RS16275;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044666.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 303110 303346 . - . ID=gene-CCO56_RS16280;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=CCO56_RS16280;old_locus_tag=CCO56_16280 NZ_NPMB01000007.1 Protein Homology CDS 303110 303346 . - 0 ID=cds-WP_000103754.1;Parent=gene-CCO56_RS16280;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=CCO56_RS16280;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 303502 304236 . - . ID=gene-CCO56_RS16285;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CCO56_RS16285;old_locus_tag=CCO56_16285 NZ_NPMB01000007.1 Protein Homology CDS 303502 304236 . - 0 ID=cds-WP_000007236.1;Parent=gene-CCO56_RS16285;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=CCO56_RS16285;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 304249 305178 . - . ID=gene-CCO56_RS16290;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CCO56_RS16290;old_locus_tag=CCO56_16290 NZ_NPMB01000007.1 Protein Homology CDS 304249 305178 . - 0 ID=cds-WP_000191343.1;Parent=gene-CCO56_RS16290;Dbxref=GenBank:WP_000191343.1;Name=WP_000191343.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=CCO56_RS16290;product=ACP S-malonyltransferase;protein_id=WP_000191343.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 305194 306147 . - . ID=gene-CCO56_RS16295;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=CCO56_RS16295;old_locus_tag=CCO56_16295 NZ_NPMB01000007.1 Protein Homology CDS 305194 306147 . - 0 ID=cds-WP_080177066.1;Parent=gene-CCO56_RS16295;Dbxref=GenBank:WP_080177066.1;Name=WP_080177066.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=CCO56_RS16295;product=beta-ketoacyl-ACP synthase III;protein_id=WP_080177066.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 306227 307306 . - . ID=gene-CCO56_RS16300;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CCO56_RS16300;old_locus_tag=CCO56_16300 NZ_NPMB01000007.1 Protein Homology CDS 306227 307306 . - 0 ID=cds-WP_001518286.1;Parent=gene-CCO56_RS16300;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=CCO56_RS16300;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 307440 307613 . - . ID=gene-CCO56_RS16305;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CCO56_RS16305;old_locus_tag=CCO56_16305 NZ_NPMB01000007.1 Protein Homology CDS 307440 307613 . - 0 ID=cds-WP_000290727.1;Parent=gene-CCO56_RS16305;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=CCO56_RS16305;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 307665 308186 . - . ID=gene-CCO56_RS16310;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=CCO56_RS16310;old_locus_tag=CCO56_16310 NZ_NPMB01000007.1 Protein Homology CDS 307665 308186 . - 0 ID=cds-WP_001174492.1;Parent=gene-CCO56_RS16310;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=CCO56_RS16310;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 308384 308968 . + . ID=gene-CCO56_RS16315;Name=CCO56_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16315;old_locus_tag=CCO56_16315 NZ_NPMB01000007.1 Protein Homology CDS 308384 308968 . + 0 ID=cds-WP_001137603.1;Parent=gene-CCO56_RS16315;Dbxref=GenBank:WP_001137603.1;Name=WP_001137603.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003836743.1;locus_tag=CCO56_RS16315;product=Maf family protein;protein_id=WP_001137603.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 309051 310004 . - . ID=gene-CCO56_RS16320;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=CCO56_RS16320;old_locus_tag=CCO56_16320 NZ_NPMB01000007.1 Protein Homology CDS 309051 310004 . - 0 ID=cds-WP_000846310.1;Parent=gene-CCO56_RS16320;Dbxref=GenBank:WP_000846310.1;Name=WP_000846310.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036228.1;locus_tag=CCO56_RS16320;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846310.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 310578 313781 . + . ID=gene-CCO56_RS16330;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=CCO56_RS16330;old_locus_tag=CCO56_16330 NZ_NPMB01000007.1 Protein Homology CDS 310578 313781 . + 0 ID=cds-WP_000827463.1;Parent=gene-CCO56_RS16330;Dbxref=GenBank:WP_000827463.1;Name=WP_000827463.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=CCO56_RS16330;product=ribonuclease E;protein_id=WP_000827463.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 314039 314992 . - . ID=gene-CCO56_RS16335;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=CCO56_RS16335;old_locus_tag=CCO56_16335 NZ_NPMB01000007.1 Protein Homology CDS 314039 314992 . - 0 ID=cds-WP_001223032.1;Parent=gene-CCO56_RS16335;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=CCO56_RS16335;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 315007 316668 . - . ID=gene-CCO56_RS16340;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=CCO56_RS16340;old_locus_tag=CCO56_16340 NZ_NPMB01000007.1 Protein Homology CDS 315007 316668 . - 0 ID=cds-WP_000096425.1;Parent=gene-CCO56_RS16340;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=CCO56_RS16340;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 316733 317683 . - . ID=gene-CCO56_RS16345;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=CCO56_RS16345;old_locus_tag=CCO56_16345 NZ_NPMB01000007.1 Protein Homology CDS 316733 317683 . - 0 ID=cds-WP_000578686.1;Parent=gene-CCO56_RS16345;Dbxref=GenBank:WP_000578686.1;Name=WP_000578686.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=CCO56_RS16345;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578686.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 317683 318780 . - . ID=gene-CCO56_RS16350;Name=CCO56_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16350;old_locus_tag=CCO56_16350 NZ_NPMB01000007.1 Protein Homology CDS 317683 318780 . - 0 ID=cds-WP_001518955.1;Parent=gene-CCO56_RS16350;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=CCO56_RS16350;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 318792 319490 . - . ID=gene-CCO56_RS16355;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=CCO56_RS16355;old_locus_tag=CCO56_16355 NZ_NPMB01000007.1 Protein Homology CDS 318792 319490 . - 0 ID=cds-WP_001174897.1;Parent=gene-CCO56_RS16355;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=CCO56_RS16355;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 319544 320326 . - . ID=gene-CCO56_RS16360;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=CCO56_RS16360;old_locus_tag=CCO56_16360 NZ_NPMB01000007.1 Protein Homology CDS 319544 320326 . - 0 ID=cds-WP_000625851.1;Parent=gene-CCO56_RS16360;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=CCO56_RS16360;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 320340 321095 . - . ID=gene-CCO56_RS16365;Name=CCO56_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16365;old_locus_tag=CCO56_16365 NZ_NPMB01000007.1 Protein Homology CDS 320340 321095 . - 0 ID=cds-WP_000349278.1;Parent=gene-CCO56_RS16365;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=CCO56_RS16365;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 321116 322327 . - . ID=gene-CCO56_RS16370;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=CCO56_RS16370;old_locus_tag=CCO56_16370 NZ_NPMB01000007.1 Protein Homology CDS 321116 322327 . - 0 ID=cds-WP_000010567.1;Parent=gene-CCO56_RS16370;Dbxref=GenBank:WP_000010567.1;Name=WP_000010567.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=CCO56_RS16370;product=flagellar hook protein FlgE;protein_id=WP_000010567.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 322354 323052 . - . ID=gene-CCO56_RS16375;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=CCO56_RS16375;old_locus_tag=CCO56_16375 NZ_NPMB01000007.1 Protein Homology CDS 322354 323052 . - 0 ID=cds-WP_000020450.1;Parent=gene-CCO56_RS16375;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=CCO56_RS16375;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 323064 323468 . - . ID=gene-CCO56_RS16380;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=CCO56_RS16380;old_locus_tag=CCO56_16380 NZ_NPMB01000007.1 Protein Homology CDS 323064 323468 . - 0 ID=cds-WP_001196448.1;Parent=gene-CCO56_RS16380;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=CCO56_RS16380;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 323472 323888 . - . ID=gene-CCO56_RS16385;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=CCO56_RS16385;old_locus_tag=CCO56_16385 NZ_NPMB01000007.1 Protein Homology CDS 323472 323888 . - 0 ID=cds-WP_000887043.1;Parent=gene-CCO56_RS16385;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=CCO56_RS16385;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 324045 324704 . + . ID=gene-CCO56_RS16395;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=CCO56_RS16395;old_locus_tag=CCO56_16395 NZ_NPMB01000007.1 Protein Homology CDS 324045 324704 . + 0 ID=cds-WP_001194091.1;Parent=gene-CCO56_RS16395;Dbxref=GenBank:WP_001194091.1;Name=WP_001194091.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=CCO56_RS16395;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194091.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 324796 325089 . + . ID=gene-CCO56_RS16400;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=CCO56_RS16400;old_locus_tag=CCO56_16400 NZ_NPMB01000007.1 Protein Homology CDS 324796 325089 . + 0 ID=cds-WP_080177067.1;Parent=gene-CCO56_RS16400;Dbxref=GenBank:WP_080177067.1;Name=WP_080177067.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=CCO56_RS16400;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_080177067.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 325094 325516 . + . ID=gene-CCO56_RS16405;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=CCO56_RS16405;old_locus_tag=CCO56_16405 NZ_NPMB01000007.1 Protein Homology CDS 325094 325516 . + 0 ID=cds-WP_000197547.1;Parent=gene-CCO56_RS16405;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=CCO56_RS16405;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 325598 327133 . - . ID=gene-CCO56_RS16410;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=CCO56_RS16410;old_locus_tag=CCO56_16410 NZ_NPMB01000007.1 Protein Homology CDS 325598 327133 . - 0 ID=cds-WP_080177068.1;Parent=gene-CCO56_RS16410;Dbxref=GenBank:WP_080177068.1;Name=WP_080177068.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=CCO56_RS16410;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_080177068.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 327437 328360 . - . ID=gene-CCO56_RS16415;Name=CCO56_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16415;old_locus_tag=CCO56_16415 NZ_NPMB01000007.1 Protein Homology CDS 327437 328360 . - 0 ID=cds-WP_001259728.1;Parent=gene-CCO56_RS16415;Dbxref=GenBank:WP_001259728.1;Name=WP_001259728.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=CCO56_RS16415;product=Gfo/Idh/MocA family protein;protein_id=WP_001259728.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 328362 329009 . - . ID=gene-CCO56_RS16420;Name=CCO56_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16420;old_locus_tag=CCO56_16420 NZ_NPMB01000007.1 Protein Homology CDS 328362 329009 . - 0 ID=cds-WP_000873047.1;Parent=gene-CCO56_RS16420;Dbxref=GenBank:WP_000873047.1;Name=WP_000873047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=CCO56_RS16420;product=YceH family protein;protein_id=WP_000873047.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 329045 329629 . - . ID=gene-CCO56_RS16425;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=CCO56_RS16425;old_locus_tag=CCO56_16425 NZ_NPMB01000007.1 Protein Homology CDS 329045 329629 . - 0 ID=cds-WP_000468204.1;Parent=gene-CCO56_RS16425;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=CCO56_RS16425;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 329866 331074 . + . ID=gene-CCO56_RS16430;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=CCO56_RS16430;old_locus_tag=CCO56_16430 NZ_NPMB01000007.1 Protein Homology CDS 329866 331074 . + 0 ID=cds-WP_000092178.1;Parent=gene-CCO56_RS16430;Dbxref=GenBank:WP_000092178.1;Name=WP_000092178.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=CCO56_RS16430;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092178.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 331138 331785 . + . ID=gene-CCO56_RS16435;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=CCO56_RS16435;old_locus_tag=CCO56_16435 NZ_NPMB01000007.1 Protein Homology CDS 331138 331785 . + 0 ID=cds-WP_023212473.1;Parent=gene-CCO56_RS16435;Dbxref=GenBank:WP_023212473.1;Name=WP_023212473.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=CCO56_RS16435;product=glutaredoxin 2;protein_id=WP_023212473.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 331910 332470 . + . ID=gene-CCO56_RS16440;Name=CCO56_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16440;old_locus_tag=CCO56_16440 NZ_NPMB01000007.1 Protein Homology CDS 331910 332470 . + 0 ID=cds-WP_000713053.1;Parent=gene-CCO56_RS16440;Dbxref=GenBank:WP_000713053.1;Name=WP_000713053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=CCO56_RS16440;product=lipoprotein;protein_id=WP_000713053.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 332574 333620 . + . ID=gene-CCO56_RS16445;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CCO56_RS16445;old_locus_tag=CCO56_16445 NZ_NPMB01000007.1 Protein Homology CDS 332574 333620 . + 0 ID=cds-WP_000126587.1;Parent=gene-CCO56_RS16445;Dbxref=GenBank:WP_000126587.1;Name=WP_000126587.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=CCO56_RS16445;product=dihydroorotase;protein_id=WP_000126587.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 333694 333939 . + . ID=gene-CCO56_RS16450;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=CCO56_RS16450;old_locus_tag=CCO56_16450 NZ_NPMB01000007.1 Protein Homology CDS 333694 333939 . + 0 ID=cds-WP_001217763.1;Parent=gene-CCO56_RS16450;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=CCO56_RS16450;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 334229 334483 . + . ID=gene-CCO56_RS16455;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=CCO56_RS16455;old_locus_tag=CCO56_16455 NZ_NPMB01000007.1 Protein Homology CDS 334229 334483 . + 0 ID=cds-WP_000414441.1;Parent=gene-CCO56_RS16455;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=CCO56_RS16455;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 334596 335714 . + . ID=gene-CCO56_RS16460;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=CCO56_RS16460;old_locus_tag=CCO56_16460 NZ_NPMB01000007.1 Protein Homology CDS 334596 335714 . + 0 ID=cds-WP_031601914.1;Parent=gene-CCO56_RS16460;Dbxref=GenBank:WP_031601914.1;Name=WP_031601914.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=CCO56_RS16460;product=N-methyl-L-tryptophan oxidase;protein_id=WP_031601914.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 335755 335868 . + . ID=gene-CCO56_RS16465;Name=CCO56_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16465;old_locus_tag=CCO56_16465 NZ_NPMB01000007.1 Protein Homology CDS 335755 335868 . + 0 ID=cds-WP_001253282.1;Parent=gene-CCO56_RS16465;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=CCO56_RS16465;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 336130 336702 . + . ID=gene-CCO56_RS16475;Name=CCO56_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16475;old_locus_tag=CCO56_16475 NZ_NPMB01000007.1 Protein Homology CDS 336130 336702 . + 0 ID=cds-WP_001159782.1;Parent=gene-CCO56_RS16475;Dbxref=GenBank:WP_001159782.1;Name=WP_001159782.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=CCO56_RS16475;product=cytochrome b;protein_id=WP_001159782.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 336699 337274 . + . ID=gene-CCO56_RS16480;Name=CCO56_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16480;old_locus_tag=CCO56_16480 NZ_NPMB01000007.1 Protein Homology CDS 336699 337274 . + 0 ID=cds-WP_000739886.1;Parent=gene-CCO56_RS16480;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=CCO56_RS16480;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 337326 338378 . - . ID=gene-CCO56_RS16485;Name=CCO56_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16485;old_locus_tag=CCO56_16485 NZ_NPMB01000007.1 Protein Homology CDS 337326 338378 . - 0 ID=cds-WP_080177069.1;Parent=gene-CCO56_RS16485;Dbxref=GenBank:WP_080177069.1;Name=WP_080177069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=CCO56_RS16485;product=rhodanese-related sulfurtransferase;protein_id=WP_080177069.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 338598 339518 . + . ID=gene-CCO56_RS16490;Name=CCO56_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16490;old_locus_tag=CCO56_16490 NZ_NPMB01000007.1 Protein Homology CDS 338598 339518 . + 0 ID=cds-WP_000163973.1;Parent=gene-CCO56_RS16490;Dbxref=GenBank:WP_000163973.1;Name=WP_000163973.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=CCO56_RS16490;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163973.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 339673 340887 . + . ID=gene-CCO56_RS16500;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=CCO56_RS16500;old_locus_tag=CCO56_16500 NZ_NPMB01000007.1 Protein Homology CDS 339673 340887 . + 0 ID=cds-WP_000075053.1;Parent=gene-CCO56_RS16500;Dbxref=GenBank:WP_000075053.1;Name=WP_000075053.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=CCO56_RS16500;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000075053.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 340969 341343 . + . ID=gene-CCO56_RS16505;Name=CCO56_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16505;old_locus_tag=CCO56_16505 NZ_NPMB01000007.1 Protein Homology CDS 340969 341343 . + 0 ID=cds-WP_000180050.1;Parent=gene-CCO56_RS16505;Dbxref=GenBank:WP_000180050.1;Name=WP_000180050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=CCO56_RS16505;product=MysB family protein;protein_id=WP_000180050.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 341344 341571 . - . ID=gene-CCO56_RS16510;Name=CCO56_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16510;old_locus_tag=CCO56_16510 NZ_NPMB01000007.1 Protein Homology CDS 341344 341571 . - 0 ID=cds-WP_001217832.1;Parent=gene-CCO56_RS16510;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=CCO56_RS16510;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 341645 344188 . - . ID=gene-CCO56_RS16515;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=CCO56_RS16515;old_locus_tag=CCO56_16515 NZ_NPMB01000007.1 Protein Homology CDS 341645 344188 . - 0 ID=cds-WP_001044607.1;Parent=gene-CCO56_RS16515;Dbxref=GenBank:WP_001044607.1;Name=WP_001044607.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=CCO56_RS16515;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044607.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 344181 345716 . - . ID=gene-CCO56_RS16520;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=CCO56_RS16520;old_locus_tag=CCO56_16520 NZ_NPMB01000007.1 Protein Homology CDS 344181 345716 . - 0 ID=cds-WP_080177071.1;Parent=gene-CCO56_RS16520;Dbxref=GenBank:WP_080177071.1;Name=WP_080177071.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=CCO56_RS16520;product=glucans biosynthesis protein MdoG;protein_id=WP_080177071.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 345988 347142 . + . ID=gene-CCO56_RS16525;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=CCO56_RS16525;old_locus_tag=CCO56_16525 NZ_NPMB01000007.1 Protein Homology CDS 345988 347142 . + 0 ID=cds-WP_023262577.1;Parent=gene-CCO56_RS16525;Dbxref=GenBank:WP_023262577.1;Name=WP_023262577.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=CCO56_RS16525;product=glucans biosynthesis protein MdoC;protein_id=WP_023262577.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 347159 348646 . - . ID=gene-CCO56_RS16530;Name=CCO56_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16530;old_locus_tag=CCO56_16530 NZ_NPMB01000007.1 Protein Homology CDS 347159 348646 . - 0 ID=cds-WP_000976323.1;Parent=gene-CCO56_RS16530;Dbxref=GenBank:WP_000976323.1;Name=WP_000976323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=CCO56_RS16530;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 348582 349121 . - . ID=gene-CCO56_RS16535;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=CCO56_RS16535;old_locus_tag=CCO56_16535 NZ_NPMB01000007.1 Protein Homology CDS 348582 349121 . - 0 ID=cds-WP_000203946.1;Parent=gene-CCO56_RS16535;Dbxref=GenBank:WP_000203946.1;Name=WP_000203946.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=CCO56_RS16535;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203946.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 349207 349527 . - . ID=gene-CCO56_RS16540;Name=CCO56_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16540;old_locus_tag=CCO56_16540 NZ_NPMB01000007.1 Protein Homology CDS 349207 349527 . - 0 ID=cds-WP_000111254.1;Parent=gene-CCO56_RS16540;Dbxref=GenBank:WP_000111254.1;Name=WP_000111254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=CCO56_RS16540;product=type 1 fimbrial protein;protein_id=WP_000111254.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 349659 349985 . - . ID=gene-CCO56_RS16545;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=CCO56_RS16545;old_locus_tag=CCO56_16545 NZ_NPMB01000007.1 Protein Homology CDS 349659 349985 . - 0 ID=cds-WP_000557256.1;Parent=gene-CCO56_RS16545;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=CCO56_RS16545;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 350047 350502 . - . ID=gene-CCO56_RS16550;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=CCO56_RS16550;old_locus_tag=CCO56_16550 NZ_NPMB01000007.1 Protein Homology CDS 350047 350502 . - 0 ID=cds-WP_000771416.1;Parent=gene-CCO56_RS16550;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=CCO56_RS16550;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 350544 350999 . - . ID=gene-CCO56_RS16555;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=CCO56_RS16555;old_locus_tag=CCO56_16555 NZ_NPMB01000007.1 Protein Homology CDS 350544 350999 . - 0 ID=cds-WP_000791656.1;Parent=gene-CCO56_RS16555;Dbxref=GenBank:WP_000791656.1;Name=WP_000791656.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=CCO56_RS16555;product=curli minor subunit CsgB;protein_id=WP_000791656.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 351755 352405 . + . ID=gene-CCO56_RS16560;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=CCO56_RS16560;old_locus_tag=CCO56_16565 NZ_NPMB01000007.1 Protein Homology CDS 351755 352405 . + 0 ID=cds-WP_000481517.1;Parent=gene-CCO56_RS16560;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=CCO56_RS16560;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 352410 352805 . + . ID=gene-CCO56_RS16565;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=CCO56_RS16565;old_locus_tag=CCO56_16570 NZ_NPMB01000007.1 Protein Homology CDS 352410 352805 . + 0 ID=cds-WP_000833307.1;Parent=gene-CCO56_RS16565;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=CCO56_RS16565;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 352832 353248 . + . ID=gene-CCO56_RS16570;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=CCO56_RS16570;old_locus_tag=CCO56_16575 NZ_NPMB01000007.1 Protein Homology CDS 352832 353248 . + 0 ID=cds-WP_001264073.1;Parent=gene-CCO56_RS16570;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=CCO56_RS16570;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 353275 354108 . + . ID=gene-CCO56_RS16575;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=CCO56_RS16575;old_locus_tag=CCO56_16580 NZ_NPMB01000007.1 Protein Homology CDS 353275 354108 . + 0 ID=cds-WP_001137620.1;Parent=gene-CCO56_RS16575;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=CCO56_RS16575;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 354147 354629 . - . ID=gene-CCO56_RS16580;Name=CCO56_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16580;old_locus_tag=CCO56_16585 NZ_NPMB01000007.1 Protein Homology CDS 354147 354629 . - 0 ID=cds-WP_001546652.1;Parent=gene-CCO56_RS16580;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=CCO56_RS16580;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 354730 355284 . - . ID=gene-CCO56_RS16585;Name=CCO56_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16585;old_locus_tag=CCO56_16590 NZ_NPMB01000007.1 Protein Homology CDS 354730 355284 . - 0 ID=cds-WP_001001890.1;Parent=gene-CCO56_RS16585;Dbxref=GenBank:WP_001001890.1;Name=WP_001001890.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=CCO56_RS16585;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001890.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 355308 356045 . - . ID=gene-CCO56_RS16590;Name=CCO56_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16590;old_locus_tag=CCO56_16595 NZ_NPMB01000007.1 Protein Homology CDS 355308 356045 . - 0 ID=cds-WP_000283646.1;Parent=gene-CCO56_RS16590;Dbxref=GenBank:WP_000283646.1;Name=WP_000283646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=CCO56_RS16590;product=phosphatase;protein_id=WP_000283646.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 356130 357068 . - . ID=gene-CCO56_RS16595;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=CCO56_RS16595;old_locus_tag=CCO56_16600 NZ_NPMB01000007.1 Protein Homology CDS 356130 357068 . - 0 ID=cds-WP_000402552.1;Parent=gene-CCO56_RS16595;Dbxref=GenBank:WP_000402552.1;Name=WP_000402552.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=CCO56_RS16595;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402552.1;transl_table=11 NZ_NPMB01000007.1 RefSeq gene 357304 357391 . + . ID=gene-CCO56_RS16605;Name=CCO56_RS16605;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS16605;old_locus_tag=CCO56_16610 NZ_NPMB01000007.1 tRNAscan-SE tRNA 357304 357391 . + . ID=rna-CCO56_RS16605;Parent=gene-CCO56_RS16605;anticodon=(pos:357338..357340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS16605;product=tRNA-Ser NZ_NPMB01000007.1 tRNAscan-SE exon 357304 357391 . + . ID=exon-CCO56_RS16605-1;Parent=rna-CCO56_RS16605;anticodon=(pos:357338..357340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS16605;product=tRNA-Ser ##sequence-region NZ_NPMB01000008.1 1 228181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000008.1 RefSeq region 1 228181 . + . ID=NZ_NPMB01000008.1:1..228181;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000008.1 RefSeq gene 418 984 . - . ID=gene-CCO56_RS16610;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=CCO56_RS16610;old_locus_tag=CCO56_16615 NZ_NPMB01000008.1 Protein Homology CDS 418 984 . - 0 ID=cds-WP_001140158.1;Parent=gene-CCO56_RS16610;Dbxref=GenBank:WP_001140158.1;Name=WP_001140158.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=CCO56_RS16610;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140158.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 1174 2205 . + . ID=gene-CCO56_RS16615;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=CCO56_RS16615;old_locus_tag=CCO56_16620 NZ_NPMB01000008.1 Protein Homology CDS 1174 2205 . + 0 ID=cds-WP_000594018.1;Parent=gene-CCO56_RS16615;Dbxref=GenBank:WP_000594018.1;Name=WP_000594018.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=CCO56_RS16615;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594018.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 2198 2851 . + . ID=gene-CCO56_RS16620;Name=CCO56_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16620;old_locus_tag=CCO56_16625 NZ_NPMB01000008.1 Protein Homology CDS 2198 2851 . + 0 ID=cds-WP_001287486.1;Parent=gene-CCO56_RS16620;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=CCO56_RS16620;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 2890 3705 . + . ID=gene-CCO56_RS16625;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=CCO56_RS16625;old_locus_tag=CCO56_16630 NZ_NPMB01000008.1 Protein Homology CDS 2890 3705 . + 0 ID=cds-WP_000874215.1;Parent=gene-CCO56_RS16625;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=CCO56_RS16625;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 3824 4228 . + . ID=gene-CCO56_RS16630;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=CCO56_RS16630;old_locus_tag=CCO56_16635 NZ_NPMB01000008.1 Protein Homology CDS 3824 4228 . + 0 ID=cds-WP_001202315.1;Parent=gene-CCO56_RS16630;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=CCO56_RS16630;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 4225 4932 . + . ID=gene-CCO56_RS16635;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=CCO56_RS16635;old_locus_tag=CCO56_16640 NZ_NPMB01000008.1 Protein Homology CDS 4225 4932 . + 0 ID=cds-WP_000093989.1;Parent=gene-CCO56_RS16635;Dbxref=GenBank:WP_000093989.1;Name=WP_000093989.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=CCO56_RS16635;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093989.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 5043 6761 . + . ID=gene-CCO56_RS16640;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=CCO56_RS16640;old_locus_tag=CCO56_16645 NZ_NPMB01000008.1 Protein Homology CDS 5043 6761 . + 0 ID=cds-WP_001260672.1;Parent=gene-CCO56_RS16640;Dbxref=GenBank:WP_001260672.1;Name=WP_001260672.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=CCO56_RS16640;product=proline--tRNA ligase;protein_id=WP_001260672.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 6835 7536 . - . ID=gene-CCO56_RS16645;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=CCO56_RS16645;old_locus_tag=CCO56_16650 NZ_NPMB01000008.1 Protein Homology CDS 6835 7536 . - 0 ID=cds-WP_000252576.1;Parent=gene-CCO56_RS16645;Dbxref=GenBank:WP_000252576.1;Name=WP_000252576.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=CCO56_RS16645;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252576.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 7568 7990 . - . ID=gene-CCO56_RS16650;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=CCO56_RS16650;old_locus_tag=CCO56_16655 NZ_NPMB01000008.1 Protein Homology CDS 7568 7990 . - 0 ID=cds-WP_000560527.1;Parent=gene-CCO56_RS16650;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=CCO56_RS16650;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 7987 8532 . - . ID=gene-CCO56_RS16655;Name=CCO56_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16655;old_locus_tag=CCO56_16660 NZ_NPMB01000008.1 Protein Homology CDS 7987 8532 . - 0 ID=cds-WP_001185319.1;Parent=gene-CCO56_RS16655;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=CCO56_RS16655;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 8730 8930 . + . ID=gene-CCO56_RS16660;Name=CCO56_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16660;old_locus_tag=CCO56_16665 NZ_NPMB01000008.1 Protein Homology CDS 8730 8930 . + 0 ID=cds-WP_001518678.1;Parent=gene-CCO56_RS16660;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=CCO56_RS16660;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 8917 9177 . + . ID=gene-CCO56_RS16665;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=CCO56_RS16665;old_locus_tag=CCO56_16670 NZ_NPMB01000008.1 Protein Homology CDS 8917 9177 . + 0 ID=cds-WP_000062329.1;Parent=gene-CCO56_RS16665;Dbxref=GenBank:WP_000062329.1;Name=WP_000062329.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=CCO56_RS16665;product=Rho-binding antiterminator;protein_id=WP_000062329.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 9261 10553 . - . ID=gene-CCO56_RS16670;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CCO56_RS16670;old_locus_tag=CCO56_16675 NZ_NPMB01000008.1 Protein Homology CDS 9261 10553 . - 0 ID=cds-WP_000210050.1;Parent=gene-CCO56_RS16670;Dbxref=GenBank:WP_000210050.1;Name=WP_000210050.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=CCO56_RS16670;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000210050.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 10617 11006 . - . ID=gene-CCO56_RS16675;Name=CCO56_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16675;old_locus_tag=CCO56_16680 NZ_NPMB01000008.1 Protein Homology CDS 10617 11006 . - 0 ID=cds-WP_000901086.1;Parent=gene-CCO56_RS16675;Dbxref=GenBank:WP_000901086.1;Name=WP_000901086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=CCO56_RS16675;product=VOC family protein;protein_id=WP_000901086.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 11062 13203 . - . ID=gene-CCO56_RS16680;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=CCO56_RS16680;old_locus_tag=CCO56_16685 NZ_NPMB01000008.1 Protein Homology CDS 11062 13203 . - 0 ID=cds-WP_001021048.1;Parent=gene-CCO56_RS16680;Dbxref=GenBank:WP_001021048.1;Name=WP_001021048.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=CCO56_RS16680;product=lysine decarboxylase LdcC;protein_id=WP_001021048.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 13279 15042 . - . ID=gene-CCO56_RS16685;Name=CCO56_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16685;old_locus_tag=CCO56_16690 NZ_NPMB01000008.1 Protein Homology CDS 13279 15042 . - 0 ID=cds-WP_080177128.1;Parent=gene-CCO56_RS16685;Dbxref=GenBank:WP_080177128.1;Name=WP_080177128.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=CCO56_RS16685;product=chitinase;protein_id=WP_080177128.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 15220 16179 . - . ID=gene-CCO56_RS16690;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=CCO56_RS16690;old_locus_tag=CCO56_16695 NZ_NPMB01000008.1 Protein Homology CDS 15220 16179 . - 0 ID=cds-WP_000055753.1;Parent=gene-CCO56_RS16690;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=CCO56_RS16690;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 16192 19674 . - . ID=gene-CCO56_RS16695;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=CCO56_RS16695;old_locus_tag=CCO56_16700 NZ_NPMB01000008.1 Protein Homology CDS 16192 19674 . - 0 ID=cds-WP_001294832.1;Parent=gene-CCO56_RS16695;Dbxref=GenBank:WP_001294832.1;Name=WP_001294832.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=CCO56_RS16695;product=DNA polymerase III subunit alpha;protein_id=WP_001294832.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 19698 20294 . - . ID=gene-CCO56_RS16700;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CCO56_RS16700;old_locus_tag=CCO56_16705 NZ_NPMB01000008.1 Protein Homology CDS 19698 20294 . - 0 ID=cds-WP_000569411.1;Parent=gene-CCO56_RS16700;Dbxref=GenBank:WP_000569411.1;Name=WP_000569411.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=CCO56_RS16700;product=ribonuclease HII;protein_id=WP_000569411.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 20291 21439 . - . ID=gene-CCO56_RS16705;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CCO56_RS16705;old_locus_tag=CCO56_16710 NZ_NPMB01000008.1 Protein Homology CDS 20291 21439 . - 0 ID=cds-WP_000741216.1;Parent=gene-CCO56_RS16705;Dbxref=GenBank:WP_000741216.1;Name=WP_000741216.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=CCO56_RS16705;product=lipid-A-disaccharide synthase;protein_id=WP_000741216.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 21439 22227 . - . ID=gene-CCO56_RS16710;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=CCO56_RS16710;old_locus_tag=CCO56_16715 NZ_NPMB01000008.1 Protein Homology CDS 21439 22227 . - 0 ID=cds-WP_000565950.1;Parent=gene-CCO56_RS16710;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=CCO56_RS16710;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 22231 22686 . - . ID=gene-CCO56_RS16715;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CCO56_RS16715;old_locus_tag=CCO56_16720 NZ_NPMB01000008.1 Protein Homology CDS 22231 22686 . - 0 ID=cds-WP_000210741.1;Parent=gene-CCO56_RS16715;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=CCO56_RS16715;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 22792 23817 . - . ID=gene-CCO56_RS16720;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CCO56_RS16720;old_locus_tag=CCO56_16725 NZ_NPMB01000008.1 Protein Homology CDS 22792 23817 . - 0 ID=cds-WP_001139265.1;Parent=gene-CCO56_RS16720;Dbxref=GenBank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=CCO56_RS16720;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 23821 24306 . - . ID=gene-CCO56_RS16725;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=CCO56_RS16725;old_locus_tag=CCO56_16730 NZ_NPMB01000008.1 Protein Homology CDS 23821 24306 . - 0 ID=cds-WP_000758966.1;Parent=gene-CCO56_RS16725;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=CCO56_RS16725;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 24430 26847 . - . ID=gene-CCO56_RS16730;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=CCO56_RS16730;old_locus_tag=CCO56_16735 NZ_NPMB01000008.1 Protein Homology CDS 24430 26847 . - 0 ID=cds-WP_080177127.1;Parent=gene-CCO56_RS16730;Dbxref=GenBank:WP_080177127.1;Name=WP_080177127.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=CCO56_RS16730;product=outer membrane protein assembly factor BamA;protein_id=WP_080177127.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 26879 28231 . - . ID=gene-CCO56_RS16735;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CCO56_RS16735;old_locus_tag=CCO56_16740 NZ_NPMB01000008.1 Protein Homology CDS 26879 28231 . - 0 ID=cds-WP_000949017.1;Parent=gene-CCO56_RS16735;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=CCO56_RS16735;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 28243 29100 . - . ID=gene-CCO56_RS16740;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=CCO56_RS16740;old_locus_tag=CCO56_16745 NZ_NPMB01000008.1 Protein Homology CDS 28243 29100 . - 0 ID=cds-WP_000922425.1;Parent=gene-CCO56_RS16740;Dbxref=GenBank:WP_000922425.1;Name=WP_000922425.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=CCO56_RS16740;product=phosphatidate cytidylyltransferase;protein_id=WP_000922425.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 29113 29871 . - . ID=gene-CCO56_RS16745;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=CCO56_RS16745;old_locus_tag=CCO56_16750 NZ_NPMB01000008.1 Protein Homology CDS 29113 29871 . - 0 ID=cds-WP_000947413.1;Parent=gene-CCO56_RS16745;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=CCO56_RS16745;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 30184 31380 . - . ID=gene-CCO56_RS16755;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=CCO56_RS16755;old_locus_tag=CCO56_16760 NZ_NPMB01000008.1 Protein Homology CDS 30184 31380 . - 0 ID=cds-WP_000811899.1;Parent=gene-CCO56_RS16755;Dbxref=GenBank:WP_000811899.1;Name=WP_000811899.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=CCO56_RS16755;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811899.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 31522 32079 . - . ID=gene-CCO56_RS16760;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CCO56_RS16760;old_locus_tag=CCO56_16765 NZ_NPMB01000008.1 Protein Homology CDS 31522 32079 . - 0 ID=cds-WP_000622423.1;Parent=gene-CCO56_RS16760;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=CCO56_RS16760;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 32226 32951 . - . ID=gene-CCO56_RS16765;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CCO56_RS16765;old_locus_tag=CCO56_16770 NZ_NPMB01000008.1 Protein Homology CDS 32226 32951 . - 0 ID=cds-WP_000224567.1;Parent=gene-CCO56_RS16765;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=CCO56_RS16765;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 33096 33947 . - . ID=gene-CCO56_RS16770;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CCO56_RS16770;old_locus_tag=CCO56_16775 NZ_NPMB01000008.1 Protein Homology CDS 33096 33947 . - 0 ID=cds-WP_000808106.1;Parent=gene-CCO56_RS16770;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=CCO56_RS16770;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 34205 34930 . - . ID=gene-CCO56_RS16780;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CCO56_RS16780;old_locus_tag=CCO56_16785 NZ_NPMB01000008.1 Protein Homology CDS 34205 34930 . - 0 ID=cds-WP_000246886.1;Parent=gene-CCO56_RS16780;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=CCO56_RS16780;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 35381 36175 . + . ID=gene-CCO56_RS16790;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CCO56_RS16790;old_locus_tag=CCO56_16795 NZ_NPMB01000008.1 Protein Homology CDS 35381 36175 . + 0 ID=cds-WP_001018214.1;Parent=gene-CCO56_RS16790;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=CCO56_RS16790;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 36413 39085 . + . ID=gene-CCO56_RS16800;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=CCO56_RS16800;old_locus_tag=CCO56_16805 NZ_NPMB01000008.1 Protein Homology CDS 36413 39085 . + 0 ID=cds-WP_001094523.1;Parent=gene-CCO56_RS16800;Dbxref=GenBank:WP_001094523.1;Name=WP_001094523.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=CCO56_RS16800;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094523.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 39115 39939 . + . ID=gene-CCO56_RS16805;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CCO56_RS16805;old_locus_tag=CCO56_16810 NZ_NPMB01000008.1 Protein Homology CDS 39115 39939 . + 0 ID=cds-WP_001186676.1;Parent=gene-CCO56_RS16805;Dbxref=GenBank:WP_001186676.1;Name=WP_001186676.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=CCO56_RS16805;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186676.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 39976 41277 . - . ID=gene-CCO56_RS16810;Name=CCO56_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16810;old_locus_tag=CCO56_16815 NZ_NPMB01000008.1 Protein Homology CDS 39976 41277 . - 0 ID=cds-WP_000017175.1;Parent=gene-CCO56_RS16810;Dbxref=GenBank:WP_000017175.1;Name=WP_000017175.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=CCO56_RS16810;product=MFS transporter;protein_id=WP_000017175.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 41524 41910 . + . ID=gene-CCO56_RS16815;Name=CCO56_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16815;old_locus_tag=CCO56_16820 NZ_NPMB01000008.1 Protein Homology CDS 41524 41910 . + 0 ID=cds-WP_000272193.1;Parent=gene-CCO56_RS16815;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=CCO56_RS16815;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 42096 45065 . + . ID=gene-CCO56_RS16820;Name=CCO56_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16820;old_locus_tag=CCO56_16825 NZ_NPMB01000008.1 Protein Homology CDS 42096 45065 . + 0 ID=cds-WP_080177125.1;Parent=gene-CCO56_RS16820;Dbxref=GenBank:WP_080177125.1;Name=WP_080177125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527551.1;locus_tag=CCO56_RS16820;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_080177125.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 45187 46344 . - . ID=gene-CCO56_RS16825;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=CCO56_RS16825;old_locus_tag=CCO56_16830 NZ_NPMB01000008.1 Protein Homology CDS 45187 46344 . - 0 ID=cds-WP_000929420.1;Parent=gene-CCO56_RS16825;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=CCO56_RS16825;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 46497 47924 . - . ID=gene-CCO56_RS16830;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=CCO56_RS16830;old_locus_tag=CCO56_16835 NZ_NPMB01000008.1 Protein Homology CDS 46497 47924 . - 0 ID=cds-WP_000753958.1;Parent=gene-CCO56_RS16830;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=CCO56_RS16830;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 48054 49571 . - . ID=gene-CCO56_RS16835;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=CCO56_RS16835;old_locus_tag=CCO56_16840 NZ_NPMB01000008.1 Protein Homology CDS 48054 49571 . - 0 ID=cds-WP_000146450.1;Parent=gene-CCO56_RS16835;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=CCO56_RS16835;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 49656 50354 . + . ID=gene-CCO56_RS16840;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=CCO56_RS16840;old_locus_tag=CCO56_16845 NZ_NPMB01000008.1 Protein Homology CDS 49656 50354 . + 0 ID=cds-WP_000689822.1;Parent=gene-CCO56_RS16840;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=CCO56_RS16840;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 50347 51147 . + . ID=gene-CCO56_RS16845;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=CCO56_RS16845;old_locus_tag=CCO56_16850 NZ_NPMB01000008.1 Protein Homology CDS 50347 51147 . + 0 ID=cds-WP_001118838.1;Parent=gene-CCO56_RS16845;Dbxref=GenBank:WP_001118838.1;Name=WP_001118838.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=CCO56_RS16845;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118838.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 51184 51807 . + . ID=gene-CCO56_RS16850;Name=CCO56_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16850;old_locus_tag=CCO56_16855 NZ_NPMB01000008.1 Protein Homology CDS 51184 51807 . + 0 ID=cds-WP_000964234.1;Parent=gene-CCO56_RS16850;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=CCO56_RS16850;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 51908 52252 . - . ID=gene-CCO56_RS16855;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=CCO56_RS16855;old_locus_tag=CCO56_16860 NZ_NPMB01000008.1 Protein Homology CDS 51908 52252 . - 0 ID=cds-WP_001278668.1;Parent=gene-CCO56_RS16855;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=CCO56_RS16855;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 52334 53755 . - . ID=gene-CCO56_RS16860;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=CCO56_RS16860;old_locus_tag=CCO56_16865 NZ_NPMB01000008.1 Protein Homology CDS 52334 53755 . - 0 ID=cds-WP_000845430.1;Parent=gene-CCO56_RS16860;Dbxref=GenBank:WP_000845430.1;Name=WP_000845430.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=CCO56_RS16860;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845430.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 53925 55205 . + . ID=gene-CCO56_RS16865;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CCO56_RS16865;old_locus_tag=CCO56_16870 NZ_NPMB01000008.1 Protein Homology CDS 53925 55205 . + 0 ID=cds-WP_000045249.1;Parent=gene-CCO56_RS16865;Dbxref=GenBank:WP_000045249.1;Name=WP_000045249.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=CCO56_RS16865;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045249.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 55296 57335 . - . ID=gene-CCO56_RS16870;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=CCO56_RS16870;old_locus_tag=CCO56_16875 NZ_NPMB01000008.1 Protein Homology CDS 55296 57335 . - 0 ID=cds-WP_001672542.1;Parent=gene-CCO56_RS16870;Dbxref=GenBank:WP_001672542.1;Name=WP_001672542.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=CCO56_RS16870;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_001672542.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 57350 58240 . - . ID=gene-CCO56_RS16875;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=CCO56_RS16875;old_locus_tag=CCO56_16880 NZ_NPMB01000008.1 Protein Homology CDS 57350 58240 . - 0 ID=cds-WP_023197097.1;Parent=gene-CCO56_RS16875;Dbxref=GenBank:WP_023197097.1;Name=WP_023197097.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=CCO56_RS16875;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_023197097.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 58240 59037 . - . ID=gene-CCO56_RS16880;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=CCO56_RS16880;old_locus_tag=CCO56_16885 NZ_NPMB01000008.1 Protein Homology CDS 58240 59037 . - 0 ID=cds-WP_001157204.1;Parent=gene-CCO56_RS16880;Dbxref=GenBank:WP_001157204.1;Name=WP_001157204.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=CCO56_RS16880;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157204.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 59086 61275 . - . ID=gene-CCO56_RS16885;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=CCO56_RS16885;old_locus_tag=CCO56_16890 NZ_NPMB01000008.1 Protein Homology CDS 59086 61275 . - 0 ID=cds-WP_000113229.1;Parent=gene-CCO56_RS16885;Dbxref=GenBank:WP_000113229.1;Name=WP_000113229.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=CCO56_RS16885;product=ferrichrome porin FhuA;protein_id=WP_000113229.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 61568 64090 . - . ID=gene-CCO56_RS16890;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=CCO56_RS16890;old_locus_tag=CCO56_16895 NZ_NPMB01000008.1 Protein Homology CDS 61568 64090 . - 0 ID=cds-WP_000918127.1;Parent=gene-CCO56_RS16890;Dbxref=GenBank:WP_000918127.1;Name=WP_000918127.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=CCO56_RS16890;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918127.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 64231 66669 . - . ID=gene-CCO56_RS16895;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=CCO56_RS16895;old_locus_tag=CCO56_16900 NZ_NPMB01000008.1 Protein Homology CDS 64231 66669 . - 0 ID=cds-WP_174202548.1;Parent=gene-CCO56_RS16895;Dbxref=GenBank:WP_174202548.1;Name=WP_174202548.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=CCO56_RS16895;product=ATP-dependent helicase HrpB;protein_id=WP_174202548.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 66742 67272 . + . ID=gene-CCO56_RS16900;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=CCO56_RS16900;old_locus_tag=CCO56_16905 NZ_NPMB01000008.1 Protein Homology CDS 66742 67272 . + 0 ID=cds-WP_001294186.1;Parent=gene-CCO56_RS16900;Dbxref=GenBank:WP_001294186.1;Name=WP_001294186.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=CCO56_RS16900;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294186.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 67289 67993 . + . ID=gene-CCO56_RS16905;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=CCO56_RS16905;old_locus_tag=CCO56_16910 NZ_NPMB01000008.1 Protein Homology CDS 67289 67993 . + 0 ID=cds-WP_001628237.1;Parent=gene-CCO56_RS16905;Dbxref=GenBank:WP_001628237.1;Name=WP_001628237.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=CCO56_RS16905;product=DNA/RNA nuclease SfsA;protein_id=WP_001628237.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 68170 68625 . + . ID=gene-CCO56_RS16910;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=CCO56_RS16910;old_locus_tag=CCO56_16915 NZ_NPMB01000008.1 Protein Homology CDS 68170 68625 . + 0 ID=cds-WP_001155232.1;Parent=gene-CCO56_RS16910;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=CCO56_RS16910;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 68694 69590 . + . ID=gene-CCO56_RS16915;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=CCO56_RS16915;old_locus_tag=CCO56_16920 NZ_NPMB01000008.1 Protein Homology CDS 68694 69590 . + 0 ID=cds-WP_023217598.1;Parent=gene-CCO56_RS16915;Dbxref=GenBank:WP_023217598.1;Name=WP_023217598.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=CCO56_RS16915;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_023217598.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 69752 71149 . + . ID=gene-CCO56_RS16920;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=CCO56_RS16920;old_locus_tag=CCO56_16925 NZ_NPMB01000008.1 Protein Homology CDS 69752 71149 . + 0 ID=cds-WP_204100804.1;Parent=gene-CCO56_RS16920;Dbxref=GenBank:WP_204100804.1;Name=WP_204100804.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=CCO56_RS16920;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204100804.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 71146 71625 . + . ID=gene-CCO56_RS16925;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CCO56_RS16925;old_locus_tag=CCO56_16930 NZ_NPMB01000008.1 Protein Homology CDS 71146 71625 . + 0 ID=cds-WP_000150780.1;Parent=gene-CCO56_RS16925;Dbxref=GenBank:WP_000150780.1;Name=WP_000150780.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=CCO56_RS16925;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150780.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 72028 72621 . + . ID=gene-CCO56_RS16930;Name=CCO56_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16930;old_locus_tag=CCO56_16935 NZ_NPMB01000008.1 Protein Homology CDS 72028 72621 . + 0 ID=cds-WP_000756783.1;Parent=gene-CCO56_RS16930;Dbxref=GenBank:WP_000756783.1;Name=WP_000756783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756782.1;locus_tag=CCO56_RS16930;product=fimbrial protein;protein_id=WP_000756783.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 72887 73624 . + . ID=gene-CCO56_RS16935;Name=CCO56_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16935;old_locus_tag=CCO56_16940 NZ_NPMB01000008.1 Protein Homology CDS 72887 73624 . + 0 ID=cds-WP_000019793.1;Parent=gene-CCO56_RS16935;Dbxref=GenBank:WP_000019793.1;Name=WP_000019793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019793.1;locus_tag=CCO56_RS16935;product=fimbrial chaperone;protein_id=WP_000019793.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 73684 76290 . + . ID=gene-CCO56_RS16940;Name=CCO56_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16940;old_locus_tag=CCO56_16945 NZ_NPMB01000008.1 Protein Homology CDS 73684 76290 . + 0 ID=cds-WP_001125002.1;Parent=gene-CCO56_RS16940;Dbxref=GenBank:WP_001125002.1;Name=WP_001125002.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406108.1;locus_tag=CCO56_RS16940;product=outer membrane usher protein;protein_id=WP_001125002.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 76277 76843 . + . ID=gene-CCO56_RS16945;Name=CCO56_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16945;old_locus_tag=CCO56_16950 NZ_NPMB01000008.1 Protein Homology CDS 76277 76843 . + 0 ID=cds-WP_001549988.1;Parent=gene-CCO56_RS16945;Dbxref=GenBank:WP_001549988.1;Name=WP_001549988.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542775.1;locus_tag=CCO56_RS16945;product=fimbrial protein;protein_id=WP_001549988.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 76858 77466 . + . ID=gene-CCO56_RS16950;Name=staE;gbkey=Gene;gene=staE;gene_biotype=protein_coding;locus_tag=CCO56_RS16950;old_locus_tag=CCO56_16955 NZ_NPMB01000008.1 Protein Homology CDS 76858 77466 . + 0 ID=cds-WP_000745164.1;Parent=gene-CCO56_RS16950;Dbxref=GenBank:WP_000745164.1;Name=WP_000745164.1;gbkey=CDS;gene=staE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000745165.1;locus_tag=CCO56_RS16950;product=fimbrial protein StaE;protein_id=WP_000745164.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 77478 78062 . + . ID=gene-CCO56_RS16955;Name=CCO56_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16955;old_locus_tag=CCO56_16960 NZ_NPMB01000008.1 Protein Homology CDS 77478 78062 . + 0 ID=cds-WP_023892065.1;Parent=gene-CCO56_RS16955;Dbxref=GenBank:WP_023892065.1;Name=WP_023892065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218521.1;locus_tag=CCO56_RS16955;product=fimbrial-like protein;protein_id=WP_023892065.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 78084 79352 . + . ID=gene-CCO56_RS16960;Name=CCO56_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16960;old_locus_tag=CCO56_16965 NZ_NPMB01000008.1 Protein Homology CDS 78084 79352 . + 0 ID=cds-WP_001632328.1;Parent=gene-CCO56_RS16960;Dbxref=GenBank:WP_001632328.1;Name=WP_001632328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218520.1;locus_tag=CCO56_RS16960;product=fimbrial-like adhesin;protein_id=WP_001632328.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 79474 80268 . + . ID=gene-CCO56_RS16965;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CCO56_RS16965;old_locus_tag=CCO56_16970 NZ_NPMB01000008.1 Protein Homology CDS 79474 80268 . + 0 ID=cds-WP_000043006.1;Parent=gene-CCO56_RS16965;Dbxref=GenBank:WP_000043006.1;Name=WP_000043006.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043003.1;locus_tag=CCO56_RS16965;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000043006.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 80394 81248 . + . ID=gene-CCO56_RS16970;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CCO56_RS16970;old_locus_tag=CCO56_16975 NZ_NPMB01000008.1 Protein Homology CDS 80394 81248 . + 0 ID=cds-WP_000905340.1;Parent=gene-CCO56_RS16970;Dbxref=GenBank:WP_000905340.1;Name=WP_000905340.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=CCO56_RS16970;product=pantoate--beta-alanine ligase;protein_id=WP_000905340.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 81343 81723 . + . ID=gene-CCO56_RS16980;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CCO56_RS16980;old_locus_tag=CCO56_16985 NZ_NPMB01000008.1 Protein Homology CDS 81343 81723 . + 0 ID=cds-WP_000621526.1;Parent=gene-CCO56_RS16980;Dbxref=GenBank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=CCO56_RS16980;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 81730 82959 . - . ID=gene-CCO56_RS16985;Name=CCO56_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16985;old_locus_tag=CCO56_16990 NZ_NPMB01000008.1 Protein Homology CDS 81730 82959 . - 0 ID=cds-WP_080177123.1;Parent=gene-CCO56_RS16985;Dbxref=GenBank:WP_080177123.1;Name=WP_080177123.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=CCO56_RS16985;product=polysaccharide deacetylase family protein;protein_id=WP_080177123.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 83021 83461 . - . ID=gene-CCO56_RS16990;Name=CCO56_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS16990;old_locus_tag=CCO56_16995 NZ_NPMB01000008.1 Protein Homology CDS 83021 83461 . - 0 ID=cds-WP_000901969.1;Parent=gene-CCO56_RS16990;Dbxref=GenBank:WP_000901969.1;Name=WP_000901969.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=CCO56_RS16990;product=PTS sugar transporter subunit IIA;protein_id=WP_000901969.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 83827 84378 . + . ID=gene-CCO56_RS17000;Name=CCO56_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17000;old_locus_tag=CCO56_17005 NZ_NPMB01000008.1 Protein Homology CDS 83827 84378 . + 0 ID=cds-WP_000779119.1;Parent=gene-CCO56_RS17000;Dbxref=GenBank:WP_000779119.1;Name=WP_000779119.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=CCO56_RS17000;product=fimbrial protein;protein_id=WP_000779119.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 84426 85109 . + . ID=gene-CCO56_RS17005;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=CCO56_RS17005;old_locus_tag=CCO56_17010 NZ_NPMB01000008.1 Protein Homology CDS 84426 85109 . + 0 ID=cds-WP_023212435.1;Parent=gene-CCO56_RS17005;Dbxref=GenBank:WP_023212435.1;Name=WP_023212435.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=CCO56_RS17005;product=fimbrial biogenesis chaperone StiB;protein_id=WP_023212435.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 85136 87682 . + . ID=gene-CCO56_RS17010;Name=CCO56_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17010;old_locus_tag=CCO56_17015 NZ_NPMB01000008.1 Protein Homology CDS 85136 87682 . + 0 ID=cds-WP_080177122.1;Parent=gene-CCO56_RS17010;Dbxref=GenBank:WP_080177122.1;Name=WP_080177122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=CCO56_RS17010;product=fimbrial outer membrane usher protein;protein_id=WP_080177122.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 87691 88767 . + . ID=gene-CCO56_RS17015;Name=CCO56_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17015;old_locus_tag=CCO56_17020 NZ_NPMB01000008.1 Protein Homology CDS 87691 88767 . + 0 ID=cds-WP_000794035.1;Parent=gene-CCO56_RS17015;Dbxref=GenBank:WP_000794035.1;Name=WP_000794035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=CCO56_RS17015;product=fimbrial protein;protein_id=WP_000794035.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 88885 89655 . - . ID=gene-CCO56_RS17020;Name=CCO56_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17020;old_locus_tag=CCO56_17025 NZ_NPMB01000008.1 Protein Homology CDS 88885 89655 . - 0 ID=cds-WP_000983418.1;Parent=gene-CCO56_RS17020;Dbxref=GenBank:WP_000983418.1;Name=WP_000983418.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=CCO56_RS17020;product=ABC transporter permease;protein_id=WP_000983418.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 89652 90578 . - . ID=gene-CCO56_RS17025;Name=CCO56_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17025;old_locus_tag=CCO56_17030 NZ_NPMB01000008.1 Protein Homology CDS 89652 90578 . - 0 ID=cds-WP_000150617.1;Parent=gene-CCO56_RS17025;Dbxref=GenBank:WP_000150617.1;Name=WP_000150617.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=CCO56_RS17025;product=ABC transporter ATP-binding protein;protein_id=WP_000150617.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 90687 91349 . + . ID=gene-CCO56_RS17030;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=CCO56_RS17030;old_locus_tag=CCO56_17035 NZ_NPMB01000008.1 Protein Homology CDS 90687 91349 . + 0 ID=cds-WP_000651590.1;Parent=gene-CCO56_RS17030;Dbxref=GenBank:WP_000651590.1;Name=WP_000651590.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=CCO56_RS17030;product=carbonate dehydratase;protein_id=WP_000651590.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 91407 91943 . - . ID=gene-CCO56_RS17035;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CCO56_RS17035;old_locus_tag=CCO56_17040 NZ_NPMB01000008.1 Protein Homology CDS 91407 91943 . - 0 ID=cds-WP_000683342.1;Parent=gene-CCO56_RS17035;Dbxref=GenBank:WP_000683342.1;Name=WP_000683342.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=CCO56_RS17035;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683342.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 92149 94539 . + . ID=gene-CCO56_RS17040;Name=CCO56_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17040;old_locus_tag=CCO56_17045 NZ_NPMB01000008.1 Protein Homology CDS 92149 94539 . + 0 ID=cds-WP_000829733.1;Parent=gene-CCO56_RS17040;Dbxref=GenBank:WP_000829733.1;Name=WP_000829733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=CCO56_RS17040;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_000829733.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 94617 96227 . - . ID=gene-CCO56_RS17045;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=CCO56_RS17045;old_locus_tag=CCO56_17050 NZ_NPMB01000008.1 Protein Homology CDS 94617 96227 . - 0 ID=cds-WP_080177121.1;Parent=gene-CCO56_RS17045;Dbxref=GenBank:WP_080177121.1;Name=WP_080177121.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=CCO56_RS17045;product=multicopper oxidase CueO;protein_id=WP_080177121.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 96429 96776 . + . ID=gene-CCO56_RS17050;Name=CCO56_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17050;old_locus_tag=CCO56_17055 NZ_NPMB01000008.1 Protein Homology CDS 96429 96776 . + 0 ID=cds-WP_000846613.1;Parent=gene-CCO56_RS17050;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=CCO56_RS17050;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 96883 97743 . + . ID=gene-CCO56_RS17055;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=CCO56_RS17055;old_locus_tag=CCO56_17060 NZ_NPMB01000008.1 Protein Homology CDS 96883 97743 . + 0 ID=cds-WP_000829968.1;Parent=gene-CCO56_RS17055;Dbxref=GenBank:WP_000829968.1;Name=WP_000829968.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=CCO56_RS17055;product=polyamine aminopropyltransferase;protein_id=WP_000829968.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 97764 98558 . + . ID=gene-CCO56_RS17060;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=CCO56_RS17060;old_locus_tag=CCO56_17065 NZ_NPMB01000008.1 Protein Homology CDS 97764 98558 . + 0 ID=cds-WP_000734276.1;Parent=gene-CCO56_RS17060;Dbxref=GenBank:WP_000734276.1;Name=WP_000734276.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=CCO56_RS17060;product=adenosylmethionine decarboxylase;protein_id=WP_000734276.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 98588 99355 . - . ID=gene-CCO56_RS17065;Name=CCO56_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17065;old_locus_tag=CCO56_17070 NZ_NPMB01000008.1 Protein Homology CDS 98588 99355 . - 0 ID=cds-WP_000678254.1;Parent=gene-CCO56_RS17065;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=CCO56_RS17065;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 99365 100348 . - . ID=gene-CCO56_RS17070;Name=CCO56_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17070;old_locus_tag=CCO56_17075 NZ_NPMB01000008.1 Protein Homology CDS 99365 100348 . - 0 ID=cds-WP_000448748.1;Parent=gene-CCO56_RS17070;Dbxref=GenBank:WP_000448748.1;Name=WP_000448748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=CCO56_RS17070;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448748.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 100338 101609 . - . ID=gene-CCO56_RS17075;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=CCO56_RS17075;old_locus_tag=CCO56_17080 NZ_NPMB01000008.1 Protein Homology CDS 100338 101609 . - 0 ID=cds-WP_000782195.1;Parent=gene-CCO56_RS17075;Dbxref=GenBank:WP_000782195.1;Name=WP_000782195.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=CCO56_RS17075;product=D-threonate kinase;protein_id=WP_000782195.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 101606 102559 . - . ID=gene-CCO56_RS17080;Name=CCO56_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17080;old_locus_tag=CCO56_17085 NZ_NPMB01000008.1 Protein Homology CDS 101606 102559 . - 0 ID=cds-WP_001022089.1;Parent=gene-CCO56_RS17080;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=CCO56_RS17080;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 102794 103156 . - . ID=gene-CCO56_RS17085;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=CCO56_RS17085;old_locus_tag=CCO56_17090 NZ_NPMB01000008.1 Protein Homology CDS 102794 103156 . - 0 ID=cds-WP_000384308.1;Parent=gene-CCO56_RS17085;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=CCO56_RS17085;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 103345 105942 . - . ID=gene-CCO56_RS17090;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=CCO56_RS17090;old_locus_tag=CCO56_17095 NZ_NPMB01000008.1 Protein Homology CDS 103345 105942 . - 0 ID=cds-WP_061380476.1;Parent=gene-CCO56_RS17090;Dbxref=GenBank:WP_061380476.1;Name=WP_061380476.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459163.1;locus_tag=CCO56_RS17090;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_061380476.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 106331 107953 . + . ID=gene-CCO56_RS17095;Name=CCO56_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17095;old_locus_tag=CCO56_17100 NZ_NPMB01000008.1 Protein Homology CDS 106331 107953 . + 0 ID=cds-WP_024155105.1;Parent=gene-CCO56_RS17095;Dbxref=GenBank:WP_024155105.1;Name=WP_024155105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=CCO56_RS17095;product=DUF3300 domain-containing protein;protein_id=WP_024155105.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 107966 108757 . + . ID=gene-CCO56_RS17100;Name=CCO56_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17100;old_locus_tag=CCO56_17105 NZ_NPMB01000008.1 Protein Homology CDS 107966 108757 . + 0 ID=cds-WP_000757447.1;Parent=gene-CCO56_RS17100;Dbxref=GenBank:WP_000757447.1;Name=WP_000757447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=CCO56_RS17100;product=DUF2950 family protein;protein_id=WP_000757447.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 108795 109079 . - . ID=gene-CCO56_RS17105;Name=CCO56_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17105;old_locus_tag=CCO56_17110 NZ_NPMB01000008.1 Protein Homology CDS 108795 109079 . - 0 ID=cds-WP_000765363.1;Parent=gene-CCO56_RS17105;Dbxref=GenBank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=CCO56_RS17105;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 109368 110792 . - . ID=gene-CCO56_RS17110;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CCO56_RS17110;old_locus_tag=CCO56_17115 NZ_NPMB01000008.1 Protein Homology CDS 109368 110792 . - 0 ID=cds-WP_001529952.1;Parent=gene-CCO56_RS17110;Dbxref=GenBank:WP_001529952.1;Name=WP_001529952.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=CCO56_RS17110;product=dihydrolipoyl dehydrogenase;protein_id=WP_001529952.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 110994 112883 . - . ID=gene-CCO56_RS17115;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=CCO56_RS17115;old_locus_tag=CCO56_17120 NZ_NPMB01000008.1 Protein Homology CDS 110994 112883 . - 0 ID=cds-WP_094882061.1;Parent=gene-CCO56_RS17115;Dbxref=GenBank:WP_094882061.1;Name=WP_094882061.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=CCO56_RS17115;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_094882061.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 112898 115561 . - . ID=gene-CCO56_RS17120;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=CCO56_RS17120;old_locus_tag=CCO56_17125 NZ_NPMB01000008.1 Protein Homology CDS 112898 115561 . - 0 ID=cds-WP_000003840.1;Parent=gene-CCO56_RS17120;Dbxref=GenBank:WP_000003840.1;Name=WP_000003840.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=CCO56_RS17120;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003840.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 115721 116485 . - . ID=gene-CCO56_RS17125;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=CCO56_RS17125;old_locus_tag=CCO56_17130 NZ_NPMB01000008.1 Protein Homology CDS 115721 116485 . - 0 ID=cds-WP_000331771.1;Parent=gene-CCO56_RS17125;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=CCO56_RS17125;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 117048 118421 . + . ID=gene-CCO56_RS17130;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=CCO56_RS17130;old_locus_tag=CCO56_17135 NZ_NPMB01000008.1 Protein Homology CDS 117048 118421 . + 0 ID=cds-WP_000969487.1;Parent=gene-CCO56_RS17130;Dbxref=GenBank:WP_000969487.1;Name=WP_000969487.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=CCO56_RS17130;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 118585 119991 . + . ID=gene-CCO56_RS17135;Name=CCO56_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17135;old_locus_tag=CCO56_17140 NZ_NPMB01000008.1 Protein Homology CDS 118585 119991 . + 0 ID=cds-WP_080177258.1;Parent=gene-CCO56_RS17135;Dbxref=GenBank:WP_080177258.1;Name=WP_080177258.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=CCO56_RS17135;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_080177258.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 119991 120941 . + . ID=gene-CCO56_RS17140;Name=CCO56_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17140;old_locus_tag=CCO56_17145 NZ_NPMB01000008.1 Protein Homology CDS 119991 120941 . + 0 ID=cds-WP_000024771.1;Parent=gene-CCO56_RS17140;Dbxref=GenBank:WP_000024771.1;Name=WP_000024771.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=CCO56_RS17140;product=glycoside hydrolase family 43 protein;protein_id=WP_000024771.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 121033 121887 . - . ID=gene-CCO56_RS17145;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=CCO56_RS17145;old_locus_tag=CCO56_17150 NZ_NPMB01000008.1 Protein Homology CDS 121033 121887 . - 0 ID=cds-WP_000172039.1;Parent=gene-CCO56_RS17145;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=CCO56_RS17145;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 121884 122447 . - . ID=gene-CCO56_RS17150;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=CCO56_RS17150;old_locus_tag=CCO56_17155 NZ_NPMB01000008.1 Protein Homology CDS 121884 122447 . - 0 ID=cds-WP_000936326.1;Parent=gene-CCO56_RS17150;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=CCO56_RS17150;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 122535 123428 . + . ID=gene-CCO56_RS17155;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CCO56_RS17155;old_locus_tag=CCO56_17160 NZ_NPMB01000008.1 Protein Homology CDS 122535 123428 . + 0 ID=cds-WP_023232749.1;Parent=gene-CCO56_RS17155;Dbxref=GenBank:WP_023232749.1;Name=WP_023232749.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=CCO56_RS17155;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_023232749.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 123650 124087 . + . ID=gene-CCO56_RS17165;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=CCO56_RS17165;old_locus_tag=CCO56_17170 NZ_NPMB01000008.1 Protein Homology CDS 123650 124087 . + 0 ID=cds-WP_000414988.1;Parent=gene-CCO56_RS17165;Dbxref=GenBank:WP_000414988.1;Name=WP_000414988.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=CCO56_RS17165;product=prepilin peptidase-dependent pilin;protein_id=WP_000414988.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 124097 125482 . + . ID=gene-CCO56_RS17170;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=CCO56_RS17170;old_locus_tag=CCO56_17175 NZ_NPMB01000008.1 Protein Homology CDS 124097 125482 . + 0 ID=cds-WP_080177257.1;Parent=gene-CCO56_RS17170;Dbxref=GenBank:WP_080177257.1;Name=WP_080177257.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=CCO56_RS17170;product=type II secretion system protein GspE;protein_id=WP_080177257.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 125472 126674 . + . ID=gene-CCO56_RS17175;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=CCO56_RS17175;old_locus_tag=CCO56_17180 NZ_NPMB01000008.1 Protein Homology CDS 125472 126674 . + 0 ID=cds-WP_023137250.1;Parent=gene-CCO56_RS17175;Dbxref=GenBank:WP_023137250.1;Name=WP_023137250.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=CCO56_RS17175;product=protein transport protein HofC;protein_id=WP_023137250.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 126705 127748 . - . ID=gene-CCO56_RS17180;Name=CCO56_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17180;old_locus_tag=CCO56_17185 NZ_NPMB01000008.1 Protein Homology CDS 126705 127748 . - 0 ID=cds-WP_001217363.1;Parent=gene-CCO56_RS17180;Dbxref=GenBank:WP_001217363.1;Name=WP_001217363.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=CCO56_RS17180;product=GMP reductase;protein_id=WP_001217363.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 127974 128594 . + . ID=gene-CCO56_RS17185;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CCO56_RS17185;old_locus_tag=CCO56_17190 NZ_NPMB01000008.1 Protein Homology CDS 127974 128594 . + 0 ID=cds-WP_001270919.1;Parent=gene-CCO56_RS17185;Dbxref=GenBank:WP_001270919.1;Name=WP_001270919.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=CCO56_RS17185;product=dephospho-CoA kinase;protein_id=WP_001270919.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 128594 129337 . + . ID=gene-CCO56_RS17190;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=CCO56_RS17190;old_locus_tag=CCO56_17195 NZ_NPMB01000008.1 Protein Homology CDS 128594 129337 . + 0 ID=cds-WP_000556893.1;Parent=gene-CCO56_RS17190;Dbxref=GenBank:WP_000556893.1;Name=WP_000556893.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=CCO56_RS17190;product=cell division protein ZapD;protein_id=WP_000556893.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 129347 129538 . + . ID=gene-CCO56_RS17195;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=CCO56_RS17195;old_locus_tag=CCO56_17200 NZ_NPMB01000008.1 Protein Homology CDS 129347 129538 . + 0 ID=cds-WP_001286419.1;Parent=gene-CCO56_RS17195;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=CCO56_RS17195;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11 NZ_NPMB01000008.1 RefSeq pseudogene 129535 129648 . - . ID=gene-CCO56_RS24185;Name=CCO56_RS24185;end_range=129648,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24185;old_locus_tag=CCO56_17205;partial=true;pseudo=true NZ_NPMB01000008.1 Protein Homology CDS 129535 129648 . - 0 ID=cds-CCO56_RS24185;Parent=gene-CCO56_RS24185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=129648,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=CCO56_RS24185;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_NPMB01000008.1 RefSeq pseudogene 129679 129819 . + . ID=gene-CCO56_RS23850;Name=CCO56_RS23850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23850;old_locus_tag=CCO56_17210;partial=true;pseudo=true;start_range=.,129679 NZ_NPMB01000008.1 Protein Homology CDS 129679 129819 . + 0 ID=cds-CCO56_RS23850;Parent=gene-CCO56_RS23850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=CCO56_RS23850;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,129679;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 129853 130248 . - . ID=gene-CCO56_RS17210;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=CCO56_RS17210;old_locus_tag=CCO56_17215 NZ_NPMB01000008.1 Protein Homology CDS 129853 130248 . - 0 ID=cds-WP_000826474.1;Parent=gene-CCO56_RS17210;Dbxref=GenBank:WP_000826474.1;Name=WP_000826474.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=CCO56_RS17210;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000826474.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 130400 133105 . - . ID=gene-CCO56_RS17215;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CCO56_RS17215;old_locus_tag=CCO56_17220 NZ_NPMB01000008.1 Protein Homology CDS 130400 133105 . - 0 ID=cds-WP_000905755.1;Parent=gene-CCO56_RS17215;Dbxref=GenBank:WP_000905755.1;Name=WP_000905755.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=CCO56_RS17215;product=preprotein translocase subunit SecA;protein_id=WP_000905755.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 133167 133664 . - . ID=gene-CCO56_RS17220;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=CCO56_RS17220;old_locus_tag=CCO56_17225 NZ_NPMB01000008.1 Protein Homology CDS 133167 133664 . - 0 ID=cds-WP_000014336.1;Parent=gene-CCO56_RS17220;Dbxref=GenBank:WP_000014336.1;Name=WP_000014336.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=CCO56_RS17220;product=secA translation cis-regulator SecM;protein_id=WP_000014336.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 133943 134860 . - . ID=gene-CCO56_RS17225;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=CCO56_RS17225;old_locus_tag=CCO56_17230 NZ_NPMB01000008.1 Protein Homology CDS 133943 134860 . - 0 ID=cds-WP_000595487.1;Parent=gene-CCO56_RS17225;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=CCO56_RS17225;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 134961 136112 . - . ID=gene-CCO56_RS17230;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CCO56_RS17230;old_locus_tag=CCO56_17235 NZ_NPMB01000008.1 Protein Homology CDS 134961 136112 . - 0 ID=cds-WP_000462785.1;Parent=gene-CCO56_RS17230;Dbxref=GenBank:WP_000462785.1;Name=WP_000462785.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=CCO56_RS17230;product=cell division protein FtsZ;protein_id=WP_000462785.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 136173 137435 . - . ID=gene-CCO56_RS17235;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CCO56_RS17235;old_locus_tag=CCO56_17240 NZ_NPMB01000008.1 Protein Homology CDS 136173 137435 . - 0 ID=cds-WP_000588463.1;Parent=gene-CCO56_RS17235;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=CCO56_RS17235;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 137432 138262 . - . ID=gene-CCO56_RS17240;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=CCO56_RS17240;old_locus_tag=CCO56_17245 NZ_NPMB01000008.1 Protein Homology CDS 137432 138262 . - 0 ID=cds-WP_000075728.1;Parent=gene-CCO56_RS17240;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=CCO56_RS17240;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 138264 139184 . - . ID=gene-CCO56_RS17245;Name=CCO56_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17245;old_locus_tag=CCO56_17250 NZ_NPMB01000008.1 Protein Homology CDS 138264 139184 . - 0 ID=cds-WP_000763892.1;Parent=gene-CCO56_RS17245;Dbxref=GenBank:WP_000763892.1;Name=WP_000763892.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=CCO56_RS17245;product=D-alanine--D-alanine ligase;protein_id=WP_000763892.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 139177 140652 . - . ID=gene-CCO56_RS17250;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CCO56_RS17250;old_locus_tag=CCO56_17255 NZ_NPMB01000008.1 Protein Homology CDS 139177 140652 . - 0 ID=cds-WP_001096070.1;Parent=gene-CCO56_RS17250;Dbxref=GenBank:WP_001096070.1;Name=WP_001096070.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=CCO56_RS17250;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096070.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 140771 141838 . - . ID=gene-CCO56_RS17255;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CCO56_RS17255;old_locus_tag=CCO56_17260 NZ_NPMB01000008.1 Protein Homology CDS 140771 141838 . - 0 ID=cds-WP_000016613.1;Parent=gene-CCO56_RS17255;Dbxref=GenBank:WP_000016613.1;Name=WP_000016613.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=CCO56_RS17255;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016613.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 141835 143079 . - . ID=gene-CCO56_RS17260;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CCO56_RS17260;old_locus_tag=CCO56_17265 NZ_NPMB01000008.1 Protein Homology CDS 141835 143079 . - 0 ID=cds-WP_001239803.1;Parent=gene-CCO56_RS17260;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=CCO56_RS17260;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 143079 144395 . - . ID=gene-CCO56_RS17265;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CCO56_RS17265;old_locus_tag=CCO56_17270 NZ_NPMB01000008.1 Protein Homology CDS 143079 144395 . - 0 ID=cds-WP_000796443.1;Parent=gene-CCO56_RS17265;Dbxref=GenBank:WP_000796443.1;Name=WP_000796443.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=CCO56_RS17265;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796443.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 144398 145480 . - . ID=gene-CCO56_RS17270;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CCO56_RS17270;old_locus_tag=CCO56_17275 NZ_NPMB01000008.1 Protein Homology CDS 144398 145480 . - 0 ID=cds-WP_000964138.1;Parent=gene-CCO56_RS17270;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=CCO56_RS17270;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 145474 146832 . - . ID=gene-CCO56_RS17275;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=CCO56_RS17275;old_locus_tag=CCO56_17280 NZ_NPMB01000008.1 Protein Homology CDS 145474 146832 . - 0 ID=cds-WP_000626639.1;Parent=gene-CCO56_RS17275;Dbxref=GenBank:WP_000626639.1;Name=WP_000626639.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=CCO56_RS17275;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626639.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 146829 148316 . - . ID=gene-CCO56_RS17280;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=CCO56_RS17280;old_locus_tag=CCO56_17285 NZ_NPMB01000008.1 Protein Homology CDS 146829 148316 . - 0 ID=cds-WP_000775073.1;Parent=gene-CCO56_RS17280;Dbxref=GenBank:WP_000775073.1;Name=WP_000775073.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=CCO56_RS17280;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000775073.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 148303 150069 . - . ID=gene-CCO56_RS17285;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO56_RS17285;old_locus_tag=CCO56_17290 NZ_NPMB01000008.1 Protein Homology CDS 148303 150069 . - 0 ID=cds-WP_000642236.1;Parent=gene-CCO56_RS17285;Dbxref=GenBank:WP_000642236.1;Name=WP_000642236.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=CCO56_RS17285;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642236.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 150085 150450 . - . ID=gene-CCO56_RS17290;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CCO56_RS17290;old_locus_tag=CCO56_17295 NZ_NPMB01000008.1 Protein Homology CDS 150085 150450 . - 0 ID=cds-WP_000625651.1;Parent=gene-CCO56_RS17290;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=CCO56_RS17290;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 150447 151388 . - . ID=gene-CCO56_RS17295;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CCO56_RS17295;old_locus_tag=CCO56_17300 NZ_NPMB01000008.1 Protein Homology CDS 150447 151388 . - 0 ID=cds-WP_000970444.1;Parent=gene-CCO56_RS17295;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=CCO56_RS17295;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 151390 151848 . - . ID=gene-CCO56_RS17300;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CCO56_RS17300;old_locus_tag=CCO56_17305 NZ_NPMB01000008.1 Protein Homology CDS 151390 151848 . - 0 ID=cds-WP_000488294.1;Parent=gene-CCO56_RS17300;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=CCO56_RS17300;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 152454 153458 . - . ID=gene-CCO56_RS17305;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=CCO56_RS17305;old_locus_tag=CCO56_17310 NZ_NPMB01000008.1 Protein Homology CDS 152454 153458 . - 0 ID=cds-WP_000762406.1;Parent=gene-CCO56_RS17305;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=CCO56_RS17305;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 153742 154233 . - . ID=gene-CCO56_RS17310;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO56_RS17310;old_locus_tag=CCO56_17315 NZ_NPMB01000008.1 Protein Homology CDS 153742 154233 . - 0 ID=cds-WP_001563086.1;Parent=gene-CCO56_RS17310;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=CCO56_RS17310;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 154236 155960 . - . ID=gene-CCO56_RS17315;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=CCO56_RS17315;old_locus_tag=CCO56_17320 NZ_NPMB01000008.1 Protein Homology CDS 154236 155960 . - 0 ID=cds-WP_000425619.1;Parent=gene-CCO56_RS17315;Dbxref=GenBank:WP_000425619.1;Name=WP_000425619.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=CCO56_RS17315;product=acetolactate synthase 3 large subunit;protein_id=WP_000425619.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 156282 157226 . - . ID=gene-CCO56_RS17320;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=CCO56_RS17320;old_locus_tag=CCO56_17325 NZ_NPMB01000008.1 Protein Homology CDS 156282 157226 . - 0 ID=cds-WP_001115421.1;Parent=gene-CCO56_RS17320;Dbxref=GenBank:WP_001115421.1;Name=WP_001115421.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=CCO56_RS17320;product=transcriptional regulator LeuO;protein_id=WP_001115421.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 157883 157969 . + . ID=gene-CCO56_RS17325;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=CCO56_RS17325;old_locus_tag=CCO56_17330 NZ_NPMB01000008.1 Protein Homology CDS 157883 157969 . + 0 ID=cds-WP_001575587.1;Parent=gene-CCO56_RS17325;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=CCO56_RS17325;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 158057 159628 . + . ID=gene-CCO56_RS17330;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=CCO56_RS17330;old_locus_tag=CCO56_17335 NZ_NPMB01000008.1 Protein Homology CDS 158057 159628 . + 0 ID=cds-WP_000082819.1;Parent=gene-CCO56_RS17330;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=CCO56_RS17330;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 159628 160719 . + . ID=gene-CCO56_RS17335;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CCO56_RS17335;old_locus_tag=CCO56_17340 NZ_NPMB01000008.1 Protein Homology CDS 159628 160719 . + 0 ID=cds-WP_000042325.1;Parent=gene-CCO56_RS17335;Dbxref=GenBank:WP_000042325.1;Name=WP_000042325.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=CCO56_RS17335;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042325.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 160722 162122 . + . ID=gene-CCO56_RS17340;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO56_RS17340;old_locus_tag=CCO56_17345 NZ_NPMB01000008.1 Protein Homology CDS 160722 162122 . + 0 ID=cds-WP_001140632.1;Parent=gene-CCO56_RS17340;Dbxref=GenBank:WP_001140632.1;Name=WP_001140632.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=CCO56_RS17340;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140632.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 162133 162738 . + . ID=gene-CCO56_RS17345;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO56_RS17345;old_locus_tag=CCO56_17350 NZ_NPMB01000008.1 Protein Homology CDS 162133 162738 . + 0 ID=cds-WP_000818267.1;Parent=gene-CCO56_RS17345;Dbxref=GenBank:WP_000818267.1;Name=WP_000818267.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=CCO56_RS17345;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818267.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 163024 163146 . - . ID=gene-CCO56_RS17350;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=CCO56_RS17350;old_locus_tag=CCO56_17355 NZ_NPMB01000008.1 Protein Homology CDS 163024 163146 . - 0 ID=cds-WP_000553886.1;Parent=gene-CCO56_RS17350;Dbxref=GenBank:WP_000553886.1;Name=WP_000553886.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=CCO56_RS17350;product=glucose uptake inhibitor SgrT;protein_id=WP_000553886.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 163239 164897 . + . ID=gene-CCO56_RS17355;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=CCO56_RS17355;old_locus_tag=CCO56_17360 NZ_NPMB01000008.1 Protein Homology CDS 163239 164897 . + 0 ID=cds-WP_001139030.1;Parent=gene-CCO56_RS17355;Dbxref=GenBank:WP_001139030.1;Name=WP_001139030.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=CCO56_RS17355;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139030.1;transl_table=11 NZ_NPMB01000008.1 cmsearch riboswitch 164945 165044 . + . ID=id-NZ_NPMB01000008.1:164945..165044;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_NPMB01000008.1 RefSeq gene 165076 166059 . + . ID=gene-CCO56_RS17360;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=CCO56_RS17360;old_locus_tag=CCO56_17365 NZ_NPMB01000008.1 Protein Homology CDS 165076 166059 . + 0 ID=cds-WP_000915330.1;Parent=gene-CCO56_RS17360;Dbxref=GenBank:WP_000915330.1;Name=WP_000915330.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=CCO56_RS17360;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915330.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 166035 167645 . + . ID=gene-CCO56_RS17365;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=CCO56_RS17365;old_locus_tag=CCO56_17370 NZ_NPMB01000008.1 Protein Homology CDS 166035 167645 . + 0 ID=cds-WP_023214742.1;Parent=gene-CCO56_RS17365;Dbxref=GenBank:WP_023214742.1;Name=WP_023214742.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=CCO56_RS17365;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_023214742.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 167629 168336 . + . ID=gene-CCO56_RS17370;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=CCO56_RS17370;old_locus_tag=CCO56_17375 NZ_NPMB01000008.1 Protein Homology CDS 167629 168336 . + 0 ID=cds-WP_000915974.1;Parent=gene-CCO56_RS17370;Dbxref=GenBank:WP_000915974.1;Name=WP_000915974.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=CCO56_RS17370;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915974.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 168375 169142 . - . ID=gene-CCO56_RS17375;Name=CCO56_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17375;old_locus_tag=CCO56_17380 NZ_NPMB01000008.1 Protein Homology CDS 168375 169142 . - 0 ID=cds-WP_001148370.1;Parent=gene-CCO56_RS17375;Dbxref=GenBank:WP_001148370.1;Name=WP_001148370.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=CCO56_RS17375;product=DedA family protein;protein_id=WP_001148370.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 169261 170106 . - . ID=gene-CCO56_RS17380;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=CCO56_RS17380;old_locus_tag=CCO56_17385 NZ_NPMB01000008.1 Protein Homology CDS 169261 170106 . - 0 ID=cds-WP_000852387.1;Parent=gene-CCO56_RS17380;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=CCO56_RS17380;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 170447 172156 . + . ID=gene-CCO56_RS17385;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=CCO56_RS17385;old_locus_tag=CCO56_17390 NZ_NPMB01000008.1 Protein Homology CDS 170447 172156 . + 0 ID=cds-WP_080177358.1;Parent=gene-CCO56_RS17385;Dbxref=GenBank:WP_080177358.1;Name=WP_080177358.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=CCO56_RS17385;product=ribulokinase;protein_id=WP_080177358.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 172167 173669 . + . ID=gene-CCO56_RS17390;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=CCO56_RS17390;old_locus_tag=CCO56_17395 NZ_NPMB01000008.1 Protein Homology CDS 172167 173669 . + 0 ID=cds-WP_023212446.1;Parent=gene-CCO56_RS17390;Dbxref=GenBank:WP_023212446.1;Name=WP_023212446.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=CCO56_RS17390;product=L-arabinose isomerase;protein_id=WP_023212446.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 173810 174505 . + . ID=gene-CCO56_RS17395;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO56_RS17395;old_locus_tag=CCO56_17400 NZ_NPMB01000008.1 Protein Homology CDS 173810 174505 . + 0 ID=cds-WP_023209240.1;Parent=gene-CCO56_RS17395;Dbxref=GenBank:WP_023209240.1;Name=WP_023209240.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=CCO56_RS17395;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_023209240.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 174511 174930 . - . ID=gene-CCO56_RS17400;Name=CCO56_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17400;old_locus_tag=CCO56_17405 NZ_NPMB01000008.1 Protein Homology CDS 174511 174930 . - 0 ID=cds-WP_023137259.1;Parent=gene-CCO56_RS17400;Dbxref=GenBank:WP_023137259.1;Name=WP_023137259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=CCO56_RS17400;product=DUF4751 family protein;protein_id=WP_023137259.1;transl_table=11 NZ_NPMB01000008.1 RefSeq pseudogene 175649 176047 . + . ID=gene-CCO56_RS17415;Name=CCO56_RS17415;end_range=176047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS17415;old_locus_tag=CCO56_17420;partial=true;pseudo=true NZ_NPMB01000008.1 Protein Homology CDS 175649 176047 . + 0 ID=cds-CCO56_RS17415;Parent=gene-CCO56_RS17415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:1904047;end_range=176047,.;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=CCO56_RS17415;partial=true;product=YdcF family protein;pseudo=true;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 176123 177328 . - . ID=gene-CCO56_RS17420;Name=CCO56_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17420;old_locus_tag=CCO56_17425 NZ_NPMB01000008.1 Protein Homology CDS 176123 177328 . - 0 ID=cds-WP_176207685.1;Parent=gene-CCO56_RS17420;Dbxref=GenBank:WP_176207685.1;Name=WP_176207685.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669153.1;locus_tag=CCO56_RS17420;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_176207685.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 177387 177791 . + . ID=gene-CCO56_RS17425;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CCO56_RS17425;old_locus_tag=CCO56_17430 NZ_NPMB01000008.1 Protein Homology CDS 177387 177791 . + 0 ID=cds-WP_176207684.1;Parent=gene-CCO56_RS17425;Dbxref=GenBank:WP_176207684.1;Name=WP_176207684.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1;locus_tag=CCO56_RS17425;product=IS200/IS605 family transposase;protein_id=WP_176207684.1;transl_table=11 NZ_NPMB01000008.1 RefSeq pseudogene 177866 178087 . + . ID=gene-CCO56_RS17430;Name=CCO56_RS17430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS17430;old_locus_tag=CCO56_17435;partial=true;pseudo=true;start_range=.,177866 NZ_NPMB01000008.1 Protein Homology CDS 177866 178087 . + 0 ID=cds-CCO56_RS17430;Parent=gene-CCO56_RS17430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=CCO56_RS17430;partial=true;product=YdcF family protein;pseudo=true;start_range=.,177866;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 178131 180482 . + . ID=gene-CCO56_RS17435;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=CCO56_RS17435;old_locus_tag=CCO56_17440 NZ_NPMB01000008.1 Protein Homology CDS 178131 180482 . + 0 ID=cds-WP_000035717.1;Parent=gene-CCO56_RS17435;Dbxref=GenBank:WP_000035717.1;Name=WP_000035717.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=CCO56_RS17435;product=DNA polymerase II;protein_id=WP_000035717.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 180656 183562 . + . ID=gene-CCO56_RS17440;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=CCO56_RS17440;old_locus_tag=CCO56_17445 NZ_NPMB01000008.1 Protein Homology CDS 180656 183562 . + 0 ID=cds-WP_094882062.1;Parent=gene-CCO56_RS17440;Dbxref=GenBank:WP_094882062.1;Name=WP_094882062.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=CCO56_RS17440;product=RNA polymerase-associated protein RapA;protein_id=WP_094882062.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 183574 184233 . + . ID=gene-CCO56_RS17445;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=CCO56_RS17445;old_locus_tag=CCO56_17450 NZ_NPMB01000008.1 Protein Homology CDS 183574 184233 . + 0 ID=cds-WP_000525196.1;Parent=gene-CCO56_RS17445;Dbxref=GenBank:WP_000525196.1;Name=WP_000525196.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=CCO56_RS17445;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525196.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 184328 185140 . - . ID=gene-CCO56_RS17450;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=CCO56_RS17450;old_locus_tag=CCO56_17455 NZ_NPMB01000008.1 Protein Homology CDS 184328 185140 . - 0 ID=cds-WP_001200595.1;Parent=gene-CCO56_RS17450;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=CCO56_RS17450;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 185394 187748 . + . ID=gene-CCO56_RS17455;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=CCO56_RS17455;old_locus_tag=CCO56_17460 NZ_NPMB01000008.1 Protein Homology CDS 185394 187748 . + 0 ID=cds-WP_080177361.1;Parent=gene-CCO56_RS17455;Dbxref=GenBank:WP_080177361.1;Name=WP_080177361.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=CCO56_RS17455;product=LPS assembly protein LptD;protein_id=WP_080177361.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 187802 189088 . + . ID=gene-CCO56_RS17460;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=CCO56_RS17460;old_locus_tag=CCO56_17465 NZ_NPMB01000008.1 Protein Homology CDS 187802 189088 . + 0 ID=cds-WP_000800482.1;Parent=gene-CCO56_RS17460;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=CCO56_RS17460;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 189088 190077 . + . ID=gene-CCO56_RS17465;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CCO56_RS17465;old_locus_tag=CCO56_17470 NZ_NPMB01000008.1 Protein Homology CDS 189088 190077 . + 0 ID=cds-WP_000093001.1;Parent=gene-CCO56_RS17465;Dbxref=GenBank:WP_000093001.1;Name=WP_000093001.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=CCO56_RS17465;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000093001.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 190074 190895 . + . ID=gene-CCO56_RS17470;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CCO56_RS17470;old_locus_tag=CCO56_17475 NZ_NPMB01000008.1 Protein Homology CDS 190074 190895 . + 0 ID=cds-WP_001065397.1;Parent=gene-CCO56_RS17470;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=CCO56_RS17470;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 190898 191275 . + . ID=gene-CCO56_RS17475;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=CCO56_RS17475;old_locus_tag=CCO56_17480 NZ_NPMB01000008.1 Protein Homology CDS 190898 191275 . + 0 ID=cds-WP_000610894.1;Parent=gene-CCO56_RS17475;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=CCO56_RS17475;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 191286 192134 . + . ID=gene-CCO56_RS17480;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=CCO56_RS17480;old_locus_tag=CCO56_17485 NZ_NPMB01000008.1 Protein Homology CDS 191286 192134 . + 0 ID=cds-WP_000257211.1;Parent=gene-CCO56_RS17480;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=CCO56_RS17480;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 192230 192709 . - . ID=gene-CCO56_RS17485;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=CCO56_RS17485;old_locus_tag=CCO56_17490 NZ_NPMB01000008.1 Protein Homology CDS 192230 192709 . - 0 ID=cds-WP_000624379.1;Parent=gene-CCO56_RS17485;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=CCO56_RS17485;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 192908 194770 . - . ID=gene-CCO56_RS17490;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=CCO56_RS17490;old_locus_tag=CCO56_17495 NZ_NPMB01000008.1 Protein Homology CDS 192908 194770 . - 0 ID=cds-WP_000377170.1;Parent=gene-CCO56_RS17490;Dbxref=GenBank:WP_000377170.1;Name=WP_000377170.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=CCO56_RS17490;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377170.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 194763 195293 . - . ID=gene-CCO56_RS17495;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=CCO56_RS17495;old_locus_tag=CCO56_17500 NZ_NPMB01000008.1 Protein Homology CDS 194763 195293 . - 0 ID=cds-WP_000600713.1;Parent=gene-CCO56_RS17495;Dbxref=GenBank:WP_000600713.1;Name=WP_000600713.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=CCO56_RS17495;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600713.1;transl_table=11 NZ_NPMB01000008.1 RefSeq pseudogene 195414 195494 . + . ID=gene-CCO56_RS24190;Name=CCO56_RS24190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS24190;partial=true;pseudo=true;start_range=.,195414 NZ_NPMB01000008.1 Protein Homology CDS 195414 195494 . + 0 ID=cds-CCO56_RS24190;Parent=gene-CCO56_RS24190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO56_RS24190;partial=true;product=hypothetical protein;pseudo=true;start_range=.,195414;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 195846 197735 . - . ID=gene-CCO56_RS17510;Name=CCO56_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17510;old_locus_tag=CCO56_17515 NZ_NPMB01000008.1 Protein Homology CDS 195846 197735 . - 0 ID=cds-WP_000066316.1;Parent=gene-CCO56_RS17510;Dbxref=GenBank:WP_000066316.1;Name=WP_000066316.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=CCO56_RS17510;product=sulfatase-like hydrolase/transferase;protein_id=WP_000066316.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 198632 198922 . + . ID=gene-CCO56_RS17525;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=CCO56_RS17525;old_locus_tag=CCO56_17530 NZ_NPMB01000008.1 Protein Homology CDS 198632 198922 . + 0 ID=cds-WP_000745957.1;Parent=gene-CCO56_RS17525;Dbxref=GenBank:WP_000745957.1;Name=WP_000745957.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=CCO56_RS17525;product=DUF1471 family virulence protein SrfN;protein_id=WP_000745957.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 199146 199562 . - . ID=gene-CCO56_RS17530;Name=CCO56_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17530;old_locus_tag=CCO56_17535 NZ_NPMB01000008.1 Protein Homology CDS 199146 199562 . - 0 ID=cds-WP_000767274.1;Parent=gene-CCO56_RS17530;Dbxref=GenBank:WP_000767274.1;Name=WP_000767274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=CCO56_RS17530;product=hypothetical protein;protein_id=WP_000767274.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 199862 200092 . - . ID=gene-CCO56_RS17535;Name=CCO56_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17535;old_locus_tag=CCO56_17540 NZ_NPMB01000008.1 Protein Homology CDS 199862 200092 . - 0 ID=cds-WP_001172089.1;Parent=gene-CCO56_RS17535;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=CCO56_RS17535;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 200181 201521 . - . ID=gene-CCO56_RS17540;Name=CCO56_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17540;old_locus_tag=CCO56_17545 NZ_NPMB01000008.1 Protein Homology CDS 200181 201521 . - 0 ID=cds-WP_001136169.1;Parent=gene-CCO56_RS17540;Dbxref=GenBank:WP_001136169.1;Name=WP_001136169.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=CCO56_RS17540;product=MFS transporter;protein_id=WP_001136169.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 201669 201956 . - . ID=gene-CCO56_RS17545;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=CCO56_RS17545;old_locus_tag=CCO56_17550 NZ_NPMB01000008.1 Protein Homology CDS 201669 201956 . - 0 ID=cds-WP_000203736.1;Parent=gene-CCO56_RS17545;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=CCO56_RS17545;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 201953 203239 . - . ID=gene-CCO56_RS17550;Name=CCO56_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17550;old_locus_tag=CCO56_17555 NZ_NPMB01000008.1 Protein Homology CDS 201953 203239 . - 0 ID=cds-WP_023212450.1;Parent=gene-CCO56_RS17550;Dbxref=GenBank:WP_023212450.1;Name=WP_023212450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=CCO56_RS17550;product=FAD-dependent oxidoreductase;protein_id=WP_023212450.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 203289 204230 . - . ID=gene-CCO56_RS17555;Name=CCO56_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17555;old_locus_tag=CCO56_17560 NZ_NPMB01000008.1 Protein Homology CDS 203289 204230 . - 0 ID=cds-WP_001032188.1;Parent=gene-CCO56_RS17555;Dbxref=GenBank:WP_001032188.1;Name=WP_001032188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=CCO56_RS17555;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032188.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 204246 205016 . - . ID=gene-CCO56_RS17560;Name=CCO56_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17560;old_locus_tag=CCO56_17565 NZ_NPMB01000008.1 Protein Homology CDS 204246 205016 . - 0 ID=cds-WP_000692185.1;Parent=gene-CCO56_RS17560;Dbxref=GenBank:WP_000692185.1;Name=WP_000692185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=CCO56_RS17560;product=electron transfer flavoprotein FixA;protein_id=WP_000692185.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 205497 207014 . + . ID=gene-CCO56_RS17570;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=CCO56_RS17570;old_locus_tag=CCO56_17575 NZ_NPMB01000008.1 Protein Homology CDS 205497 207014 . + 0 ID=cds-WP_000787073.1;Parent=gene-CCO56_RS17570;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=CCO56_RS17570;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 207049 208191 . + . ID=gene-CCO56_RS17575;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=CCO56_RS17575;old_locus_tag=CCO56_17580 NZ_NPMB01000008.1 Protein Homology CDS 207049 208191 . + 0 ID=cds-WP_000347134.1;Parent=gene-CCO56_RS17575;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=CCO56_RS17575;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 208303 209520 . + . ID=gene-CCO56_RS17580;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=CCO56_RS17580;old_locus_tag=CCO56_17585 NZ_NPMB01000008.1 Protein Homology CDS 208303 209520 . + 0 ID=cds-WP_001016206.1;Parent=gene-CCO56_RS17580;Dbxref=GenBank:WP_001016206.1;Name=WP_001016206.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=CCO56_RS17580;product=L-carnitine CoA-transferase;protein_id=WP_001016206.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 209583 211136 . + . ID=gene-CCO56_RS17585;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=CCO56_RS17585;old_locus_tag=CCO56_17590 NZ_NPMB01000008.1 Protein Homology CDS 209583 211136 . + 0 ID=cds-WP_023220468.1;Parent=gene-CCO56_RS17585;Dbxref=GenBank:WP_023220468.1;Name=WP_023220468.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=CCO56_RS17585;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_023220468.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 211190 211975 . + . ID=gene-CCO56_RS17590;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=CCO56_RS17590;old_locus_tag=CCO56_17595 NZ_NPMB01000008.1 Protein Homology CDS 211190 211975 . + 0 ID=cds-WP_000004383.1;Parent=gene-CCO56_RS17590;Dbxref=GenBank:WP_000004383.1;Name=WP_000004383.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO56_RS17590;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004383.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 212085 212681 . + . ID=gene-CCO56_RS17595;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=CCO56_RS17595;old_locus_tag=CCO56_17600 NZ_NPMB01000008.1 Protein Homology CDS 212085 212681 . + 0 ID=cds-WP_000122860.1;Parent=gene-CCO56_RS17595;Dbxref=GenBank:WP_000122860.1;Name=WP_000122860.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=CCO56_RS17595;product=carnitine operon protein CaiE;protein_id=WP_000122860.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 212758 213153 . - . ID=gene-CCO56_RS17600;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=CCO56_RS17600;old_locus_tag=CCO56_17605 NZ_NPMB01000008.1 Protein Homology CDS 212758 213153 . - 0 ID=cds-WP_000333324.1;Parent=gene-CCO56_RS17600;Dbxref=GenBank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=CCO56_RS17600;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 213427 216654 . - . ID=gene-CCO56_RS17605;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CCO56_RS17605;old_locus_tag=CCO56_17610 NZ_NPMB01000008.1 Protein Homology CDS 213427 216654 . - 0 ID=cds-WP_001126323.1;Parent=gene-CCO56_RS17605;Dbxref=GenBank:WP_001126323.1;Name=WP_001126323.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=CCO56_RS17605;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126323.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 216673 217821 . - . ID=gene-CCO56_RS17610;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=CCO56_RS17610;old_locus_tag=CCO56_17615 NZ_NPMB01000008.1 Protein Homology CDS 216673 217821 . - 0 ID=cds-WP_000597273.1;Parent=gene-CCO56_RS17610;Dbxref=GenBank:WP_000597273.1;Name=WP_000597273.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=CCO56_RS17610;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597273.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 218035 218226 . + . ID=gene-CCO56_RS24010;Name=CCO56_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS24010;old_locus_tag=CCO56_17620 NZ_NPMB01000008.1 Protein Homology CDS 218035 218226 . + 0 ID=cds-WP_080177323.1;Parent=gene-CCO56_RS24010;Dbxref=GenBank:WP_080177323.1;Name=WP_080177323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519726.1;locus_tag=CCO56_RS24010;product=hypothetical protein;protein_id=WP_080177323.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 218526 218735 . + . ID=gene-CCO56_RS23550;Name=CCO56_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23550 NZ_NPMB01000008.1 GeneMarkS-2+ CDS 218526 218735 . + 0 ID=cds-WP_162297775.1;Parent=gene-CCO56_RS23550;Dbxref=GenBank:WP_162297775.1;Name=WP_162297775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS23550;product=hypothetical protein;protein_id=WP_162297775.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 218862 219683 . - . ID=gene-CCO56_RS17625;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CCO56_RS17625;old_locus_tag=CCO56_17630 NZ_NPMB01000008.1 Protein Homology CDS 218862 219683 . - 0 ID=cds-WP_023212453.1;Parent=gene-CCO56_RS17625;Dbxref=GenBank:WP_023212453.1;Name=WP_023212453.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=CCO56_RS17625;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_023212453.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 219863 220771 . - . ID=gene-CCO56_RS17630;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO56_RS17630;old_locus_tag=CCO56_17635 NZ_NPMB01000008.1 Protein Homology CDS 219863 220771 . - 0 ID=cds-WP_001103238.1;Parent=gene-CCO56_RS17630;Dbxref=GenBank:WP_001103238.1;Name=WP_001103238.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=CCO56_RS17630;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_001103238.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 220749 221300 . - . ID=gene-CCO56_RS17635;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO56_RS17635;old_locus_tag=CCO56_17640 NZ_NPMB01000008.1 Protein Homology CDS 220749 221300 . - 0 ID=cds-WP_000679050.1;Parent=gene-CCO56_RS17635;Dbxref=GenBank:WP_000679050.1;Name=WP_000679050.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=CCO56_RS17635;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000679050.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 221300 222820 . - . ID=gene-CCO56_RS17640;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO56_RS17640;old_locus_tag=CCO56_17645 NZ_NPMB01000008.1 Protein Homology CDS 221300 222820 . - 0 ID=cds-WP_000665573.1;Parent=gene-CCO56_RS17640;Dbxref=GenBank:WP_000665573.1;Name=WP_000665573.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=CCO56_RS17640;product=citrate lyase subunit alpha;protein_id=WP_000665573.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 222831 223700 . - . ID=gene-CCO56_RS17645;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO56_RS17645;old_locus_tag=CCO56_17650 NZ_NPMB01000008.1 Protein Homology CDS 222831 223700 . - 0 ID=cds-WP_023212454.1;Parent=gene-CCO56_RS17645;Dbxref=GenBank:WP_023212454.1;Name=WP_023212454.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=CCO56_RS17645;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_023212454.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 223697 223990 . - . ID=gene-CCO56_RS17650;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO56_RS17650;old_locus_tag=CCO56_17655 NZ_NPMB01000008.1 Protein Homology CDS 223697 223990 . - 0 ID=cds-WP_000691461.1;Parent=gene-CCO56_RS17650;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=CCO56_RS17650;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 224020 225063 . - . ID=gene-CCO56_RS17655;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO56_RS17655;old_locus_tag=CCO56_17660 NZ_NPMB01000008.1 Protein Homology CDS 224020 225063 . - 0 ID=cds-WP_080177324.1;Parent=gene-CCO56_RS17655;Dbxref=GenBank:WP_080177324.1;Name=WP_080177324.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=CCO56_RS17655;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_080177324.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 225308 226648 . + . ID=gene-CCO56_RS17660;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=CCO56_RS17660;old_locus_tag=CCO56_17665 NZ_NPMB01000008.1 Protein Homology CDS 225308 226648 . + 0 ID=cds-WP_000183608.1;Parent=gene-CCO56_RS17660;Dbxref=GenBank:WP_000183608.1;Name=WP_000183608.1;Ontology_term=GO:0006101,GO:0006814,GO:0008514,GO:0015293;gbkey=CDS;gene=citS;go_function=organic anion transmembrane transporter activity|0008514||IEA,symporter activity|0015293||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=CCO56_RS17660;product=citrate/sodium symporter CitS;protein_id=WP_000183608.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 226807 227046 . + . ID=gene-CCO56_RS17665;Name=CCO56_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17665;old_locus_tag=CCO56_17670 NZ_NPMB01000008.1 Protein Homology CDS 226807 227046 . + 0 ID=cds-WP_001001155.1;Parent=gene-CCO56_RS17665;Dbxref=GenBank:WP_001001155.1;Name=WP_001001155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010836018.1;locus_tag=CCO56_RS17665;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001001155.1;transl_table=11 NZ_NPMB01000008.1 RefSeq gene 227062 228181 . + . ID=gene-CCO56_RS17670;Name=CCO56_RS17670;end_range=228181,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17670;old_locus_tag=CCO56_17675;partial=true NZ_NPMB01000008.1 Protein Homology CDS 227062 228181 . + 0 ID=cds-WP_141034755.1;Parent=gene-CCO56_RS17670;Dbxref=GenBank:WP_141034755.1;Name=WP_141034755.1;Ontology_term=GO:0003824;end_range=228181,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO56_RS17670;partial=true;product=pyruvate carboxylase subunit B;protein_id=WP_141034755.1;transl_table=11 ##sequence-region NZ_NPMB01000009.1 1 222625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2024273 NZ_NPMB01000009.1 RefSeq region 1 222625 . + . ID=NZ_NPMB01000009.1:1..222625;Dbxref=taxon:2024273;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=genomic;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Sundsvall;strain=CFSAN059888;sub-species=enterica NZ_NPMB01000009.1 RefSeq gene 505 3078 . - . ID=gene-CCO56_RS17685;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CCO56_RS17685;old_locus_tag=CCO56_17690 NZ_NPMB01000009.1 Protein Homology CDS 505 3078 . - 0 ID=cds-WP_001235092.1;Parent=gene-CCO56_RS17685;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=CCO56_RS17685;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 3208 3939 . - . ID=gene-CCO56_RS17690;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=CCO56_RS17690;old_locus_tag=CCO56_17695 NZ_NPMB01000009.1 Protein Homology CDS 3208 3939 . - 0 ID=cds-WP_000992639.1;Parent=gene-CCO56_RS17690;Dbxref=GenBank:WP_000992639.1;Name=WP_000992639.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=CCO56_RS17690;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992639.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 3936 4916 . - . ID=gene-CCO56_RS17695;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=CCO56_RS17695;old_locus_tag=CCO56_17700 NZ_NPMB01000009.1 Protein Homology CDS 3936 4916 . - 0 ID=cds-WP_000079130.1;Parent=gene-CCO56_RS17695;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=CCO56_RS17695;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 5048 5785 . + . ID=gene-CCO56_RS17700;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=CCO56_RS17700;old_locus_tag=CCO56_17705 NZ_NPMB01000009.1 Protein Homology CDS 5048 5785 . + 0 ID=cds-WP_000197660.1;Parent=gene-CCO56_RS17700;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=CCO56_RS17700;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 6057 6395 . + . ID=gene-CCO56_RS17705;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CCO56_RS17705;old_locus_tag=CCO56_17710 NZ_NPMB01000009.1 Protein Homology CDS 6057 6395 . + 0 ID=cds-WP_000178449.1;Parent=gene-CCO56_RS17705;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=CCO56_RS17705;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_NPMB01000009.1 cmsearch sequence_feature 6498 6623 . + . ID=id-NZ_NPMB01000009.1:6498..6623;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_NPMB01000009.1 RefSeq gene 6499 6546 . + . ID=gene-CCO56_RS23430;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=CCO56_RS23430 NZ_NPMB01000009.1 Protein Homology CDS 6499 6546 . + 0 ID=cds-WP_010989056.1;Parent=gene-CCO56_RS23430;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=CCO56_RS23430;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 6646 7806 . + . ID=gene-CCO56_RS17710;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=CCO56_RS17710;old_locus_tag=CCO56_17715 NZ_NPMB01000009.1 Protein Homology CDS 6646 7806 . + 0 ID=cds-WP_000200080.1;Parent=gene-CCO56_RS17710;Dbxref=GenBank:WP_000200080.1;Name=WP_000200080.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=CCO56_RS17710;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200080.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 7767 8675 . - . ID=gene-CCO56_RS17715;Name=CCO56_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17715;old_locus_tag=CCO56_17720 NZ_NPMB01000009.1 Protein Homology CDS 7767 8675 . - 0 ID=cds-WP_080177216.1;Parent=gene-CCO56_RS17715;Dbxref=GenBank:WP_080177216.1;Name=WP_080177216.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=CCO56_RS17715;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_080177216.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 8733 9854 . - . ID=gene-CCO56_RS17720;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=CCO56_RS17720;old_locus_tag=CCO56_17725 NZ_NPMB01000009.1 Protein Homology CDS 8733 9854 . - 0 ID=cds-WP_000225191.1;Parent=gene-CCO56_RS17720;Dbxref=GenBank:WP_000225191.1;Name=WP_000225191.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=CCO56_RS17720;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225191.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 9864 10934 . - . ID=gene-CCO56_RS17725;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=CCO56_RS17725;old_locus_tag=CCO56_17730 NZ_NPMB01000009.1 Protein Homology CDS 9864 10934 . - 0 ID=cds-WP_001168062.1;Parent=gene-CCO56_RS17725;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=CCO56_RS17725;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 11374 11892 . + . ID=gene-CCO56_RS17730;Name=CCO56_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17730;old_locus_tag=CCO56_17735 NZ_NPMB01000009.1 Protein Homology CDS 11374 11892 . + 0 ID=cds-WP_079827262.1;Parent=gene-CCO56_RS17730;Dbxref=GenBank:WP_079827262.1;Name=WP_079827262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=CCO56_RS17730;product=YfiR family protein;protein_id=WP_079827262.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 11885 13105 . + . ID=gene-CCO56_RS17735;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=CCO56_RS17735;old_locus_tag=CCO56_17740 NZ_NPMB01000009.1 Protein Homology CDS 11885 13105 . + 0 ID=cds-WP_001030990.1;Parent=gene-CCO56_RS17735;Dbxref=GenBank:WP_001030990.1;Name=WP_001030990.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=CCO56_RS17735;product=diguanylate cyclase DgcN;protein_id=WP_001030990.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 13262 13609 . - . ID=gene-CCO56_RS17740;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CCO56_RS17740;old_locus_tag=CCO56_17745 NZ_NPMB01000009.1 Protein Homology CDS 13262 13609 . - 0 ID=cds-WP_000065257.1;Parent=gene-CCO56_RS17740;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=CCO56_RS17740;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 13650 14417 . - . ID=gene-CCO56_RS17745;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CCO56_RS17745;old_locus_tag=CCO56_17750 NZ_NPMB01000009.1 Protein Homology CDS 13650 14417 . - 0 ID=cds-WP_000469807.1;Parent=gene-CCO56_RS17745;Dbxref=GenBank:WP_000469807.1;Name=WP_000469807.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=CCO56_RS17745;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469807.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 14462 15010 . - . ID=gene-CCO56_RS17750;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CCO56_RS17750;old_locus_tag=CCO56_17755 NZ_NPMB01000009.1 Protein Homology CDS 14462 15010 . - 0 ID=cds-WP_000043266.1;Parent=gene-CCO56_RS17750;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=CCO56_RS17750;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 15029 15277 . - . ID=gene-CCO56_RS17755;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CCO56_RS17755;old_locus_tag=CCO56_17760 NZ_NPMB01000009.1 Protein Homology CDS 15029 15277 . - 0 ID=cds-WP_000256453.1;Parent=gene-CCO56_RS17755;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=CCO56_RS17755;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 15530 16891 . - . ID=gene-CCO56_RS17760;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CCO56_RS17760;old_locus_tag=CCO56_17765 NZ_NPMB01000009.1 Protein Homology CDS 15530 16891 . - 0 ID=cds-WP_000460052.1;Parent=gene-CCO56_RS17760;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=CCO56_RS17760;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 17057 17848 . + . ID=gene-CCO56_RS17765;Name=CCO56_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17765;old_locus_tag=CCO56_17770 NZ_NPMB01000009.1 Protein Homology CDS 17057 17848 . + 0 ID=cds-WP_001537507.1;Parent=gene-CCO56_RS17765;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=CCO56_RS17765;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 17868 19154 . + . ID=gene-CCO56_RS17770;Name=CCO56_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17770;old_locus_tag=CCO56_17775 NZ_NPMB01000009.1 Protein Homology CDS 17868 19154 . + 0 ID=cds-WP_127908301.1;Parent=gene-CCO56_RS17770;Dbxref=GenBank:WP_127908301.1;Name=WP_127908301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=CCO56_RS17770;product=HlyC/CorC family transporter;protein_id=WP_127908301.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 19284 19889 . + . ID=gene-CCO56_RS17775;Name=CCO56_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17775;old_locus_tag=CCO56_17780 NZ_NPMB01000009.1 Protein Homology CDS 19284 19889 . + 0 ID=cds-WP_080177215.1;Parent=gene-CCO56_RS17775;Dbxref=GenBank:WP_080177215.1;Name=WP_080177215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271805.1;locus_tag=CCO56_RS17775;product=DUF6630 family protein;protein_id=WP_080177215.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 19924 20514 . - . ID=gene-CCO56_RS17780;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CCO56_RS17780;old_locus_tag=CCO56_17785 NZ_NPMB01000009.1 Protein Homology CDS 19924 20514 . - 0 ID=cds-WP_001518875.1;Parent=gene-CCO56_RS17780;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=CCO56_RS17780;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 20637 21515 . + . ID=gene-CCO56_RS17790;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=CCO56_RS17790;old_locus_tag=CCO56_17795 NZ_NPMB01000009.1 Protein Homology CDS 20637 21515 . + 0 ID=cds-WP_001059155.1;Parent=gene-CCO56_RS17790;Dbxref=GenBank:WP_001059155.1;Name=WP_001059155.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=CCO56_RS17790;product=NAD(+) kinase;protein_id=WP_001059155.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 21601 23262 . + . ID=gene-CCO56_RS17795;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CCO56_RS17795;old_locus_tag=CCO56_17800 NZ_NPMB01000009.1 Protein Homology CDS 21601 23262 . + 0 ID=cds-WP_000880965.1;Parent=gene-CCO56_RS17795;Dbxref=GenBank:WP_000880965.1;Name=WP_000880965.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=CCO56_RS17795;product=DNA repair protein RecN;protein_id=WP_000880965.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 23411 23749 . + . ID=gene-CCO56_RS17800;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=CCO56_RS17800;old_locus_tag=CCO56_17805 NZ_NPMB01000009.1 Protein Homology CDS 23411 23749 . + 0 ID=cds-WP_001203445.1;Parent=gene-CCO56_RS17800;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=CCO56_RS17800;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 23910 24200 . - . ID=gene-CCO56_RS17805;Name=CCO56_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17805;old_locus_tag=CCO56_17810 NZ_NPMB01000009.1 Protein Homology CDS 23910 24200 . - 0 ID=cds-WP_001112990.1;Parent=gene-CCO56_RS17805;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=CCO56_RS17805;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 24190 24627 . - . ID=gene-CCO56_RS17810;Name=CCO56_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17810;old_locus_tag=CCO56_17815 NZ_NPMB01000009.1 Protein Homology CDS 24190 24627 . - 0 ID=cds-WP_001543334.1;Parent=gene-CCO56_RS17810;Dbxref=GenBank:WP_001543334.1;Name=WP_001543334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=CCO56_RS17810;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001543334.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 24816 25298 . + . ID=gene-CCO56_RS17815;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CCO56_RS17815;old_locus_tag=CCO56_17820 NZ_NPMB01000009.1 Protein Homology CDS 24816 25298 . + 0 ID=cds-WP_001518569.1;Parent=gene-CCO56_RS17815;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=CCO56_RS17815;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 25913 37387 . + . ID=gene-CCO56_RS17820;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=CCO56_RS17820;old_locus_tag=CCO56_17825 NZ_NPMB01000009.1 Protein Homology CDS 25913 37387 . + 0 ID=cds-WP_094882063.1;Parent=gene-CCO56_RS17820;Dbxref=GenBank:WP_094882063.1;Name=WP_094882063.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=CCO56_RS17820;product=biofilm-associated protein BapA;protein_id=WP_094882063.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 37452 38861 . + . ID=gene-CCO56_RS17825;Name=CCO56_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17825;old_locus_tag=CCO56_17830 NZ_NPMB01000009.1 Protein Homology CDS 37452 38861 . + 0 ID=cds-WP_000533867.1;Parent=gene-CCO56_RS17825;Dbxref=GenBank:WP_000533867.1;Name=WP_000533867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=CCO56_RS17825;product=TolC family outer membrane protein;protein_id=WP_000533867.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 38858 41038 . + . ID=gene-CCO56_RS17830;Name=CCO56_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17830;old_locus_tag=CCO56_17835 NZ_NPMB01000009.1 Protein Homology CDS 38858 41038 . + 0 ID=cds-WP_080177299.1;Parent=gene-CCO56_RS17830;Dbxref=GenBank:WP_080177299.1;Name=WP_080177299.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=CCO56_RS17830;product=type I secretion system permease/ATPase;protein_id=WP_080177299.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 41046 42209 . + . ID=gene-CCO56_RS17835;Name=CCO56_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17835;old_locus_tag=CCO56_17840 NZ_NPMB01000009.1 Protein Homology CDS 41046 42209 . + 0 ID=cds-WP_072101562.1;Parent=gene-CCO56_RS17835;Dbxref=GenBank:WP_072101562.1;Name=WP_072101562.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=CCO56_RS17835;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_072101562.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 42281 42643 . + . ID=gene-CCO56_RS17840;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CCO56_RS17840;old_locus_tag=CCO56_17845 NZ_NPMB01000009.1 cmsearch tmRNA 42281 42643 . + . ID=rna-CCO56_RS17840;Parent=gene-CCO56_RS17840;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS17840;product=transfer-messenger RNA NZ_NPMB01000009.1 cmsearch exon 42281 42643 . + . ID=exon-CCO56_RS17840-1;Parent=rna-CCO56_RS17840;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO56_RS17840;product=transfer-messenger RNA NZ_NPMB01000009.1 RefSeq gene 42808 44037 . + . ID=gene-CCO56_RS17845;Name=CCO56_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17845;old_locus_tag=CCO56_17850 NZ_NPMB01000009.1 Protein Homology CDS 42808 44037 . + 0 ID=cds-WP_001389498.1;Parent=gene-CCO56_RS17845;Dbxref=GenBank:WP_001389498.1;Name=WP_001389498.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF007246.0;locus_tag=CCO56_RS17845;product=integrase domain-containing protein;protein_id=WP_001389498.1;transl_table=11 NZ_NPMB01000009.1 RefSeq pseudogene 44055 44224 . + . ID=gene-CCO56_RS23855;Name=CCO56_RS23855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23855;partial=true;pseudo=true;start_range=.,44055 NZ_NPMB01000009.1 Protein Homology CDS 44055 44224 . + 0 ID=cds-CCO56_RS23855;Parent=gene-CCO56_RS23855;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524896.1;locus_tag=CCO56_RS23855;partial=true;product=integrase;pseudo=true;start_range=.,44055;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 44388 45401 . + . ID=gene-CCO56_RS17855;Name=CCO56_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17855;old_locus_tag=CCO56_17855 NZ_NPMB01000009.1 Protein Homology CDS 44388 45401 . + 0 ID=cds-WP_031601921.1;Parent=gene-CCO56_RS17855;Dbxref=GenBank:WP_031601921.1;Name=WP_031601921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524897.1;locus_tag=CCO56_RS17855;product=hypothetical protein;protein_id=WP_031601921.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 45514 46977 . - . ID=gene-CCO56_RS17860;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=CCO56_RS17860;old_locus_tag=CCO56_17860 NZ_NPMB01000009.1 Protein Homology CDS 45514 46977 . - 0 ID=cds-WP_080177298.1;Parent=gene-CCO56_RS17860;Dbxref=GenBank:WP_080177298.1;Name=WP_080177298.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592083.1;locus_tag=CCO56_RS17860;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_080177298.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 47030 47587 . - . ID=gene-CCO56_RS17865;Name=bfpA;gbkey=Gene;gene=bfpA;gene_biotype=protein_coding;locus_tag=CCO56_RS17865;old_locus_tag=CCO56_17865 NZ_NPMB01000009.1 Protein Homology CDS 47030 47587 . - 0 ID=cds-WP_000243504.1;Parent=gene-CCO56_RS17865;Dbxref=GenBank:WP_000243504.1;Name=WP_000243504.1;gbkey=CDS;gene=bfpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243508.1;locus_tag=CCO56_RS17865;product=type IV pilus major subunit protein BfpA;protein_id=WP_000243504.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 47985 48290 . - . ID=gene-CCO56_RS17870;Name=CCO56_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17870;old_locus_tag=CCO56_17870 NZ_NPMB01000009.1 Protein Homology CDS 47985 48290 . - 0 ID=cds-WP_031601923.1;Parent=gene-CCO56_RS17870;Dbxref=GenBank:WP_031601923.1;Name=WP_031601923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368354.1;locus_tag=CCO56_RS17870;product=conjugal transfer protein TraD;protein_id=WP_031601923.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 48301 48645 . - . ID=gene-CCO56_RS17875;Name=CCO56_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17875;old_locus_tag=CCO56_17875 NZ_NPMB01000009.1 Protein Homology CDS 48301 48645 . - 0 ID=cds-WP_031601924.1;Parent=gene-CCO56_RS17875;Dbxref=GenBank:WP_031601924.1;Name=WP_031601924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002119.1;locus_tag=CCO56_RS17875;product=hypothetical protein;protein_id=WP_031601924.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 49293 50759 . + . ID=gene-CCO56_RS17880;Name=mobQ;gbkey=Gene;gene=mobQ;gene_biotype=protein_coding;locus_tag=CCO56_RS17880;old_locus_tag=CCO56_17880 NZ_NPMB01000009.1 Protein Homology CDS 49293 50759 . + 0 ID=cds-WP_080177297.1;Parent=gene-CCO56_RS17880;Dbxref=GenBank:WP_080177297.1;Name=WP_080177297.1;gbkey=CDS;gene=mobQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764613.1;locus_tag=CCO56_RS17880;product=MobQ family relaxase;protein_id=WP_080177297.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 50838 51980 . + . ID=gene-CCO56_RS17885;Name=CCO56_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17885;old_locus_tag=CCO56_17885 NZ_NPMB01000009.1 Protein Homology CDS 50838 51980 . + 0 ID=cds-WP_141034756.1;Parent=gene-CCO56_RS17885;Dbxref=GenBank:WP_141034756.1;Name=WP_141034756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405068.1;locus_tag=CCO56_RS17885;product=hypothetical protein;protein_id=WP_141034756.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 52066 52341 . - . ID=gene-CCO56_RS17890;Name=CCO56_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17890;old_locus_tag=CCO56_17890 NZ_NPMB01000009.1 Protein Homology CDS 52066 52341 . - 0 ID=cds-WP_024705430.1;Parent=gene-CCO56_RS17890;Dbxref=GenBank:WP_024705430.1;Name=WP_024705430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151481.1;locus_tag=CCO56_RS17890;product=hypothetical protein;protein_id=WP_024705430.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 52352 52882 . - . ID=gene-CCO56_RS17895;Name=CCO56_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17895;old_locus_tag=CCO56_17895 NZ_NPMB01000009.1 Protein Homology CDS 52352 52882 . - 0 ID=cds-WP_031601927.1;Parent=gene-CCO56_RS17895;Dbxref=GenBank:WP_031601927.1;Name=WP_031601927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=CCO56_RS17895;product=lipoprotein;protein_id=WP_031601927.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 53187 53465 . - . ID=gene-CCO56_RS23860;Name=CCO56_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23860;old_locus_tag=CCO56_17900 NZ_NPMB01000009.1 Protein Homology CDS 53187 53465 . - 0 ID=cds-WP_072035442.1;Parent=gene-CCO56_RS23860;Dbxref=GenBank:WP_072035442.1;Name=WP_072035442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059618.1;locus_tag=CCO56_RS23860;product=hypothetical protein;protein_id=WP_072035442.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 54921 55655 . + . ID=gene-CCO56_RS17905;Name=CCO56_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17905;old_locus_tag=CCO56_17905 NZ_NPMB01000009.1 Protein Homology CDS 54921 55655 . + 0 ID=cds-WP_031601928.1;Parent=gene-CCO56_RS17905;Dbxref=GenBank:WP_031601928.1;Name=WP_031601928.1;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860215.1;locus_tag=CCO56_RS17905;product=replication/maintenance protein RepL;protein_id=WP_031601928.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 55683 56483 . + . ID=gene-CCO56_RS17910;Name=CCO56_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17910;old_locus_tag=CCO56_17910 NZ_NPMB01000009.1 Protein Homology CDS 55683 56483 . + 0 ID=cds-WP_031601929.1;Parent=gene-CCO56_RS17910;Dbxref=GenBank:WP_031601929.1;Name=WP_031601929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608375.1;locus_tag=CCO56_RS17910;product=hypothetical protein;protein_id=WP_031601929.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 56556 57653 . - . ID=gene-CCO56_RS17915;Name=CCO56_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17915;old_locus_tag=CCO56_17915 NZ_NPMB01000009.1 Protein Homology CDS 56556 57653 . - 0 ID=cds-WP_031601930.1;Parent=gene-CCO56_RS17915;Dbxref=GenBank:WP_031601930.1;Name=WP_031601930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322873.1;locus_tag=CCO56_RS17915;product=hypothetical protein;protein_id=WP_031601930.1;transl_table=11 NZ_NPMB01000009.1 RefSeq pseudogene 57824 58303 . + . ID=gene-CCO56_RS17920;Name=CCO56_RS17920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS17920;old_locus_tag=CCO56_17920;pseudo=true NZ_NPMB01000009.1 Protein Homology CDS 57824 58303 . + 0 ID=cds-CCO56_RS17920;Parent=gene-CCO56_RS17920;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233373.1;locus_tag=CCO56_RS17920;product=DUF4756 family protein;pseudo=true;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 58825 59703 . + . ID=gene-CCO56_RS17925;Name=CCO56_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17925;old_locus_tag=CCO56_17925 NZ_NPMB01000009.1 Protein Homology CDS 58825 59703 . + 0 ID=cds-WP_080177296.1;Parent=gene-CCO56_RS17925;Dbxref=GenBank:WP_080177296.1;Name=WP_080177296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585149.1;locus_tag=CCO56_RS17925;product=retron St85 family effector protein;protein_id=WP_080177296.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 60020 60973 . + . ID=gene-CCO56_RS17930;Name=CCO56_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17930;old_locus_tag=CCO56_17930 NZ_NPMB01000009.1 Protein Homology CDS 60020 60973 . + 0 ID=cds-WP_031601932.1;Parent=gene-CCO56_RS17930;Dbxref=GenBank:WP_031601932.1;Name=WP_031601932.1;Ontology_term=GO:0001171,GO:0051607;gbkey=CDS;go_process=reverse transcription|0001171||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001668081.1;locus_tag=CCO56_RS17930;product=retron St85 family RNA-directed DNA polymerase;protein_id=WP_031601932.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 61116 62147 . + . ID=gene-CCO56_RS17935;Name=CCO56_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17935;old_locus_tag=CCO56_17935 NZ_NPMB01000009.1 Protein Homology CDS 61116 62147 . + 0 ID=cds-WP_080177295.1;Parent=gene-CCO56_RS17935;Dbxref=GenBank:WP_080177295.1;Name=WP_080177295.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=CCO56_RS17935;product=IS630 family transposase;protein_id=WP_080177295.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 62244 62540 . - . ID=gene-CCO56_RS17940;Name=CCO56_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17940;old_locus_tag=CCO56_17940 NZ_NPMB01000009.1 Protein Homology CDS 62244 62540 . - 0 ID=cds-WP_031601933.1;Parent=gene-CCO56_RS17940;Dbxref=GenBank:WP_031601933.1;Name=WP_031601933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091325.1;locus_tag=CCO56_RS17940;product=hypothetical protein;protein_id=WP_031601933.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 62593 62883 . - . ID=gene-CCO56_RS17945;Name=CCO56_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17945;old_locus_tag=CCO56_17945 NZ_NPMB01000009.1 Protein Homology CDS 62593 62883 . - 0 ID=cds-WP_000687680.1;Parent=gene-CCO56_RS17945;Dbxref=GenBank:WP_000687680.1;Name=WP_000687680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524933.1;locus_tag=CCO56_RS17945;product=hypothetical protein;protein_id=WP_000687680.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 62965 63165 . - . ID=gene-CCO56_RS17950;Name=CCO56_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17950;old_locus_tag=CCO56_17950 NZ_NPMB01000009.1 Protein Homology CDS 62965 63165 . - 0 ID=cds-WP_094882064.1;Parent=gene-CCO56_RS17950;Dbxref=GenBank:WP_094882064.1;Name=WP_094882064.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301008.1;locus_tag=CCO56_RS17950;product=helix-turn-helix transcriptional regulator;protein_id=WP_094882064.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 63939 65135 . + . ID=gene-CCO56_RS17955;Name=CCO56_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17955;old_locus_tag=CCO56_17955 NZ_NPMB01000009.1 Protein Homology CDS 63939 65135 . + 0 ID=cds-WP_080177294.1;Parent=gene-CCO56_RS17955;Dbxref=GenBank:WP_080177294.1;Name=WP_080177294.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001702960.1;locus_tag=CCO56_RS17955;product=integrase domain-containing protein;protein_id=WP_080177294.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 65161 65694 . - . ID=gene-CCO56_RS17960;Name=CCO56_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17960;old_locus_tag=CCO56_17960 NZ_NPMB01000009.1 Protein Homology CDS 65161 65694 . - 0 ID=cds-WP_080177293.1;Parent=gene-CCO56_RS17960;Dbxref=GenBank:WP_080177293.1;Name=WP_080177293.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037889.6;locus_tag=CCO56_RS17960;product=HEPN domain-containing protein;protein_id=WP_080177293.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 65705 66892 . - . ID=gene-CCO56_RS17965;Name=CCO56_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17965;old_locus_tag=CCO56_17965 NZ_NPMB01000009.1 Protein Homology CDS 65705 66892 . - 0 ID=cds-WP_080177292.1;Parent=gene-CCO56_RS17965;Dbxref=GenBank:WP_080177292.1;Name=WP_080177292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017880056.1;locus_tag=CCO56_RS17965;product=DUF262 domain-containing protein;protein_id=WP_080177292.1;transl_table=11 NZ_NPMB01000009.1 RefSeq pseudogene 67152 67718 . - . ID=gene-CCO56_RS17975;Name=CCO56_RS17975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS17975;old_locus_tag=CCO56_17975;pseudo=true NZ_NPMB01000009.1 Protein Homology CDS 67152 67718 . - 0 ID=cds-CCO56_RS17975;Parent=gene-CCO56_RS17975;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210078.1;locus_tag=CCO56_RS17975;product=phage polarity suppression protein;pseudo=true;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 67735 68037 . - . ID=gene-CCO56_RS23985;Name=CCO56_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23985;old_locus_tag=CCO56_17980 NZ_NPMB01000009.1 Protein Homology CDS 67735 68037 . - 0 ID=cds-WP_080177300.1;Parent=gene-CCO56_RS23985;Dbxref=GenBank:WP_080177300.1;Name=WP_080177300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225776.1;locus_tag=CCO56_RS23985;product=ogr/Delta-like zinc finger family protein;protein_id=WP_080177300.1;transl_table=11 NZ_NPMB01000009.1 RefSeq pseudogene 67952 68822 . + . ID=gene-CCO56_RS23555;Name=CCO56_RS23555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS23555;partial=true;pseudo=true;start_range=.,67952 NZ_NPMB01000009.1 Protein Homology CDS 67952 68822 . + 0 ID=cds-CCO56_RS23555;Parent=gene-CCO56_RS23555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225302.1;locus_tag=CCO56_RS23555;partial=true;product=DNA primase family protein;pseudo=true;start_range=.,67952;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 68717 68980 . - . ID=gene-CCO56_RS23560;Name=CCO56_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23560 NZ_NPMB01000009.1 GeneMarkS-2+ CDS 68717 68980 . - 0 ID=cds-WP_162297774.1;Parent=gene-CCO56_RS23560;Dbxref=GenBank:WP_162297774.1;Name=WP_162297774.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS23560;product=hypothetical protein;protein_id=WP_162297774.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 69062 69829 . - . ID=gene-CCO56_RS17990;Name=CCO56_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS17990;old_locus_tag=CCO56_17990 NZ_NPMB01000009.1 Protein Homology CDS 69062 69829 . - 0 ID=cds-WP_080177291.1;Parent=gene-CCO56_RS17990;Dbxref=GenBank:WP_080177291.1;Name=WP_080177291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219132.1;locus_tag=CCO56_RS17990;product=hypothetical protein;protein_id=WP_080177291.1;transl_table=11 NZ_NPMB01000009.1 RefSeq pseudogene 70427 70654 . - . ID=gene-CCO56_RS18000;Name=CCO56_RS18000;end_range=70654,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS18000;old_locus_tag=CCO56_18000;partial=true;pseudo=true NZ_NPMB01000009.1 Protein Homology CDS 70427 70654 . - 0 ID=cds-CCO56_RS18000;Parent=gene-CCO56_RS18000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=70654,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142400.1;locus_tag=CCO56_RS18000;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 70682 71221 . - . ID=gene-CCO56_RS18005;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=CCO56_RS18005;old_locus_tag=CCO56_18005 NZ_NPMB01000009.1 Protein Homology CDS 70682 71221 . - 0 ID=cds-WP_080177289.1;Parent=gene-CCO56_RS18005;Dbxref=GenBank:WP_080177289.1;Name=WP_080177289.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=CCO56_RS18005;product=phase 1 flagellin gene repressor FljA;protein_id=WP_080177289.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 71289 72794 . - . ID=gene-CCO56_RS18010;Name=CCO56_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18010;old_locus_tag=CCO56_18010 NZ_NPMB01000009.1 Protein Homology CDS 71289 72794 . - 0 ID=cds-WP_001655619.1;Parent=gene-CCO56_RS18010;Dbxref=GenBank:WP_001655619.1;Name=WP_001655619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079799.1;locus_tag=CCO56_RS18010;product=FliC/FljB family flagellin;protein_id=WP_001655619.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 72886 73458 . + . ID=gene-CCO56_RS18015;Name=hin;gbkey=Gene;gene=hin;gene_biotype=protein_coding;locus_tag=CCO56_RS18015;old_locus_tag=CCO56_18015 NZ_NPMB01000009.1 Protein Homology CDS 72886 73458 . + 0 ID=cds-WP_000190917.1;Parent=gene-CCO56_RS18015;Dbxref=GenBank:WP_000190917.1;Name=WP_000190917.1;gbkey=CDS;gene=hin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461699.1;locus_tag=CCO56_RS18015;product=flagellar phase variation DNA invertase Hin;protein_id=WP_000190917.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 74421 75536 . + . ID=gene-CCO56_RS18025;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=CCO56_RS18025;old_locus_tag=CCO56_18025 NZ_NPMB01000009.1 Protein Homology CDS 74421 75536 . + 0 ID=cds-WP_001221111.1;Parent=gene-CCO56_RS18025;Dbxref=GenBank:WP_001221111.1;Name=WP_001221111.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528704.1;locus_tag=CCO56_RS18025;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_001221111.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 75617 79273 . + . ID=gene-CCO56_RS18030;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=CCO56_RS18030;old_locus_tag=CCO56_18030 NZ_NPMB01000009.1 Protein Homology CDS 75617 79273 . + 0 ID=cds-WP_080177220.1;Parent=gene-CCO56_RS18030;Dbxref=GenBank:WP_080177220.1;Name=WP_080177220.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=CCO56_RS18030;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_080177220.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 79383 80627 . + . ID=gene-CCO56_RS18035;Name=CCO56_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18035;old_locus_tag=CCO56_18035 NZ_NPMB01000009.1 Protein Homology CDS 79383 80627 . + 0 ID=cds-WP_080177221.1;Parent=gene-CCO56_RS18035;Dbxref=GenBank:WP_080177221.1;Name=WP_080177221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=CCO56_RS18035;product=esterase family protein;protein_id=WP_080177221.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 80659 81594 . + . ID=gene-CCO56_RS18040;Name=CCO56_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18040;old_locus_tag=CCO56_18040 NZ_NPMB01000009.1 Protein Homology CDS 80659 81594 . + 0 ID=cds-WP_064043570.1;Parent=gene-CCO56_RS18040;Dbxref=GenBank:WP_064043570.1;Name=WP_064043570.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=CCO56_RS18040;product=alpha/beta hydrolase;protein_id=WP_064043570.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 81636 83810 . - . ID=gene-CCO56_RS18045;Name=CCO56_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18045;old_locus_tag=CCO56_18045 NZ_NPMB01000009.1 Protein Homology CDS 81636 83810 . - 0 ID=cds-WP_023136560.1;Parent=gene-CCO56_RS18045;Dbxref=GenBank:WP_023136560.1;Name=WP_023136560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=CCO56_RS18045;product=TonB-dependent siderophore receptor;protein_id=WP_023136560.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 84854 85846 . - . ID=gene-CCO56_RS18060;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=CCO56_RS18060;old_locus_tag=CCO56_18060 NZ_NPMB01000009.1 Protein Homology CDS 84854 85846 . - 0 ID=cds-WP_023136559.1;Parent=gene-CCO56_RS18060;Dbxref=GenBank:WP_023136559.1;Name=WP_023136559.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=CCO56_RS18060;product=type III secretion system effector PipB2;protein_id=WP_023136559.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 86363 87292 . + . ID=gene-CCO56_RS18065;Name=CCO56_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18065;old_locus_tag=CCO56_18065 NZ_NPMB01000009.1 Protein Homology CDS 86363 87292 . + 0 ID=cds-WP_000178742.1;Parent=gene-CCO56_RS18065;Dbxref=GenBank:WP_000178742.1;Name=WP_000178742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=CCO56_RS18065;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_000178742.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 87586 88482 . + . ID=gene-CCO56_RS18075;Name=CCO56_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18075;old_locus_tag=CCO56_18075 NZ_NPMB01000009.1 Protein Homology CDS 87586 88482 . + 0 ID=cds-WP_000701508.1;Parent=gene-CCO56_RS18075;Dbxref=GenBank:WP_000701508.1;Name=WP_000701508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=CCO56_RS18075;product=antimicrobial resistance protein Mig-14;protein_id=WP_000701508.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 89204 90217 . - . ID=gene-CCO56_RS18080;Name=CCO56_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18080;old_locus_tag=CCO56_18080 NZ_NPMB01000009.1 Protein Homology CDS 89204 90217 . - 0 ID=cds-WP_001059351.1;Parent=gene-CCO56_RS18080;Dbxref=GenBank:WP_001059351.1;Name=WP_001059351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=CCO56_RS18080;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_001059351.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 90350 91765 . - . ID=gene-CCO56_RS18085;Name=CCO56_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18085;old_locus_tag=CCO56_18085 NZ_NPMB01000009.1 Protein Homology CDS 90350 91765 . - 0 ID=cds-WP_000872340.1;Parent=gene-CCO56_RS18085;Dbxref=GenBank:WP_000872340.1;Name=WP_000872340.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=CCO56_RS18085;product=sensor histidine kinase;protein_id=WP_000872340.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 91752 92426 . - . ID=gene-CCO56_RS18090;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=CCO56_RS18090;old_locus_tag=CCO56_18090 NZ_NPMB01000009.1 Protein Homology CDS 91752 92426 . - 0 ID=cds-WP_001237934.1;Parent=gene-CCO56_RS18090;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=CCO56_RS18090;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 92581 93558 . + . ID=gene-CCO56_RS18095;Name=CCO56_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18095;old_locus_tag=CCO56_18095 NZ_NPMB01000009.1 Protein Homology CDS 92581 93558 . + 0 ID=cds-WP_000744413.1;Parent=gene-CCO56_RS18095;Dbxref=GenBank:WP_000744413.1;Name=WP_000744413.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=CCO56_RS18095;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744413.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 93570 94004 . + . ID=gene-CCO56_RS18100;Name=CCO56_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18100;old_locus_tag=CCO56_18100 NZ_NPMB01000009.1 Protein Homology CDS 93570 94004 . + 0 ID=cds-WP_077914897.1;Parent=gene-CCO56_RS18100;Dbxref=GenBank:WP_077914897.1;Name=WP_077914897.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=CCO56_RS18100;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_077914897.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 94015 95529 . + . ID=gene-CCO56_RS18105;Name=CCO56_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18105;old_locus_tag=CCO56_18105 NZ_NPMB01000009.1 Protein Homology CDS 94015 95529 . + 0 ID=cds-WP_000382034.1;Parent=gene-CCO56_RS18105;Dbxref=GenBank:WP_000382034.1;Name=WP_000382034.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=CCO56_RS18105;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382034.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 95832 96809 . + . ID=gene-CCO56_RS18110;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=CCO56_RS18110;old_locus_tag=CCO56_18110 NZ_NPMB01000009.1 Protein Homology CDS 95832 96809 . + 0 ID=cds-WP_015406327.1;Parent=gene-CCO56_RS18110;Dbxref=GenBank:WP_015406327.1;Name=WP_015406327.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=CCO56_RS18110;product=glutarate dioxygenase GlaH;protein_id=WP_015406327.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 96835 98103 . + . ID=gene-CCO56_RS18115;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=CCO56_RS18115;old_locus_tag=CCO56_18115 NZ_NPMB01000009.1 Protein Homology CDS 96835 98103 . + 0 ID=cds-WP_080177222.1;Parent=gene-CCO56_RS18115;Dbxref=GenBank:WP_080177222.1;Name=WP_080177222.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=CCO56_RS18115;product=L-2-hydroxyglutarate oxidase;protein_id=WP_080177222.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 98125 99573 . + . ID=gene-CCO56_RS18120;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=CCO56_RS18120;old_locus_tag=CCO56_18120 NZ_NPMB01000009.1 Protein Homology CDS 98125 99573 . + 0 ID=cds-WP_001176523.1;Parent=gene-CCO56_RS18120;Dbxref=GenBank:WP_001176523.1;Name=WP_001176523.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=CCO56_RS18120;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_001176523.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 99588 100871 . + . ID=gene-CCO56_RS18125;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=CCO56_RS18125;old_locus_tag=CCO56_18125 NZ_NPMB01000009.1 Protein Homology CDS 99588 100871 . + 0 ID=cds-WP_079822424.1;Parent=gene-CCO56_RS18125;Dbxref=GenBank:WP_079822424.1;Name=WP_079822424.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=CCO56_RS18125;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_079822424.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 101002 102402 . + . ID=gene-CCO56_RS18130;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=CCO56_RS18130;old_locus_tag=CCO56_18130 NZ_NPMB01000009.1 Protein Homology CDS 101002 102402 . + 0 ID=cds-WP_080177223.1;Parent=gene-CCO56_RS18130;Dbxref=GenBank:WP_080177223.1;Name=WP_080177223.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=CCO56_RS18130;product=GABA permease;protein_id=WP_080177223.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 102444 103121 . + . ID=gene-CCO56_RS18135;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=CCO56_RS18135;old_locus_tag=CCO56_18135 NZ_NPMB01000009.1 Protein Homology CDS 102444 103121 . + 0 ID=cds-WP_000126152.1;Parent=gene-CCO56_RS18135;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=CCO56_RS18135;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 103143 103592 . - . ID=gene-CCO56_RS18140;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=CCO56_RS18140;old_locus_tag=CCO56_18140 NZ_NPMB01000009.1 Protein Homology CDS 103143 103592 . - 0 ID=cds-WP_000522406.1;Parent=gene-CCO56_RS18140;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=CCO56_RS18140;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 103692 103850 . - . ID=gene-CCO56_RS18150;Name=CCO56_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18150;old_locus_tag=CCO56_18145 NZ_NPMB01000009.1 Protein Homology CDS 103692 103850 . - 0 ID=cds-WP_000508175.1;Parent=gene-CCO56_RS18150;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=CCO56_RS18150;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 104033 104332 . + . ID=gene-CCO56_RS18155;Name=CCO56_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18155;old_locus_tag=CCO56_18150 NZ_NPMB01000009.1 Protein Homology CDS 104033 104332 . + 0 ID=cds-WP_000137434.1;Parent=gene-CCO56_RS18155;Dbxref=GenBank:WP_000137434.1;Name=WP_000137434.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=CCO56_RS18155;product=ArsR/SmtB family transcription factor;protein_id=WP_000137434.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 104342 104869 . + . ID=gene-CCO56_RS18160;Name=CCO56_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18160;old_locus_tag=CCO56_18155 NZ_NPMB01000009.1 Protein Homology CDS 104342 104869 . + 0 ID=cds-WP_000022011.1;Parent=gene-CCO56_RS18160;Dbxref=GenBank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=CCO56_RS18160;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 104948 105127 . + . ID=gene-CCO56_RS18165;Name=CCO56_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18165;old_locus_tag=CCO56_18160 NZ_NPMB01000009.1 Protein Homology CDS 104948 105127 . + 0 ID=cds-WP_000494935.1;Parent=gene-CCO56_RS18165;Dbxref=GenBank:WP_000494935.1;Name=WP_000494935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=CCO56_RS18165;product=hypothetical protein;protein_id=WP_000494935.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 105217 105618 . - . ID=gene-CCO56_RS18170;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=CCO56_RS18170;old_locus_tag=CCO56_18165 NZ_NPMB01000009.1 Protein Homology CDS 105217 105618 . - 0 ID=cds-WP_001051100.1;Parent=gene-CCO56_RS18170;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=CCO56_RS18170;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 106518 106967 . + . ID=gene-CCO56_RS18190;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=CCO56_RS18190;old_locus_tag=CCO56_18185 NZ_NPMB01000009.1 Protein Homology CDS 106518 106967 . + 0 ID=cds-WP_000492669.1;Parent=gene-CCO56_RS18190;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=CCO56_RS18190;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 107002 107352 . - . ID=gene-CCO56_RS18195;Name=CCO56_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18195;old_locus_tag=CCO56_18190 NZ_NPMB01000009.1 Protein Homology CDS 107002 107352 . - 0 ID=cds-WP_000281304.1;Parent=gene-CCO56_RS18195;Dbxref=GenBank:WP_000281304.1;Name=WP_000281304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=CCO56_RS18195;product=DUF2002 family protein;protein_id=WP_000281304.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 107514 107840 . + . ID=gene-CCO56_RS18200;Name=CCO56_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18200;old_locus_tag=CCO56_18195 NZ_NPMB01000009.1 Protein Homology CDS 107514 107840 . + 0 ID=cds-WP_001519557.1;Parent=gene-CCO56_RS18200;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=CCO56_RS18200;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 107924 109258 . - . ID=gene-CCO56_RS18205;Name=CCO56_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18205;old_locus_tag=CCO56_18200 NZ_NPMB01000009.1 Protein Homology CDS 107924 109258 . - 0 ID=cds-WP_001528710.1;Parent=gene-CCO56_RS18205;Dbxref=GenBank:WP_001528710.1;Name=WP_001528710.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=CCO56_RS18205;product=PLP-dependent aminotransferase family protein;protein_id=WP_001528710.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 109347 109778 . + . ID=gene-CCO56_RS18210;Name=CCO56_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18210;old_locus_tag=CCO56_18205 NZ_NPMB01000009.1 Protein Homology CDS 109347 109778 . + 0 ID=cds-WP_000209807.1;Parent=gene-CCO56_RS18210;Dbxref=GenBank:WP_000209807.1;Name=WP_000209807.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=CCO56_RS18210;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209807.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 110050 110295 . + . ID=gene-CCO56_RS18220;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=CCO56_RS18220;old_locus_tag=CCO56_18215 NZ_NPMB01000009.1 Protein Homology CDS 110050 110295 . + 0 ID=cds-WP_000028870.1;Parent=gene-CCO56_RS18220;Dbxref=GenBank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=CCO56_RS18220;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 110292 110702 . + . ID=gene-CCO56_RS18225;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CCO56_RS18225;old_locus_tag=CCO56_18220 NZ_NPMB01000009.1 Protein Homology CDS 110292 110702 . + 0 ID=cds-WP_001275402.1;Parent=gene-CCO56_RS18225;Dbxref=GenBank:WP_001275402.1;Name=WP_001275402.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=CCO56_RS18225;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275402.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 110702 112819 . + . ID=gene-CCO56_RS18230;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CCO56_RS18230;old_locus_tag=CCO56_18225 NZ_NPMB01000009.1 Protein Homology CDS 110702 112819 . + 0 ID=cds-WP_001543279.1;Parent=gene-CCO56_RS18230;Dbxref=GenBank:WP_001543279.1;Name=WP_001543279.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526351.1;locus_tag=CCO56_RS18230;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001543279.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 112830 113789 . + . ID=gene-CCO56_RS18235;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CCO56_RS18235;old_locus_tag=CCO56_18230 NZ_NPMB01000009.1 Protein Homology CDS 112830 113789 . + 0 ID=cds-WP_000777908.1;Parent=gene-CCO56_RS18235;Dbxref=GenBank:WP_000777908.1;Name=WP_000777908.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=CCO56_RS18235;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777908.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 114144 115346 . + . ID=gene-CCO56_RS18245;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=CCO56_RS18245;old_locus_tag=CCO56_18240 NZ_NPMB01000009.1 Protein Homology CDS 114144 115346 . + 0 ID=cds-WP_000985529.1;Parent=gene-CCO56_RS18245;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=CCO56_RS18245;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 115339 116403 . + . ID=gene-CCO56_RS18250;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=CCO56_RS18250;old_locus_tag=CCO56_18245 NZ_NPMB01000009.1 Protein Homology CDS 115339 116403 . + 0 ID=cds-WP_000775015.1;Parent=gene-CCO56_RS18250;Dbxref=GenBank:WP_000775015.1;Name=WP_000775015.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=CCO56_RS18250;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775015.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 116473 117468 . + . ID=gene-CCO56_RS18255;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=CCO56_RS18255;old_locus_tag=CCO56_18250 NZ_NPMB01000009.1 Protein Homology CDS 116473 117468 . + 0 ID=cds-WP_001216613.1;Parent=gene-CCO56_RS18255;Dbxref=GenBank:WP_001216613.1;Name=WP_001216613.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=CCO56_RS18255;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216613.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 117633 118817 . + . ID=gene-CCO56_RS18260;Name=CCO56_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18260;old_locus_tag=CCO56_18255 NZ_NPMB01000009.1 Protein Homology CDS 117633 118817 . + 0 ID=cds-WP_053258855.1;Parent=gene-CCO56_RS18260;Dbxref=GenBank:WP_053258855.1;Name=WP_053258855.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=CCO56_RS18260;product=MFS transporter;protein_id=WP_053258855.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 118940 119113 . - . ID=gene-CCO56_RS18265;Name=CCO56_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18265;old_locus_tag=CCO56_18260 NZ_NPMB01000009.1 GeneMarkS-2+ CDS 118940 119113 . - 0 ID=cds-WP_162297773.1;Parent=gene-CCO56_RS18265;Dbxref=GenBank:WP_162297773.1;Name=WP_162297773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO56_RS18265;product=hypothetical protein;protein_id=WP_162297773.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 119314 119844 . + . ID=gene-CCO56_RS18270;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=CCO56_RS18270;old_locus_tag=CCO56_18265 NZ_NPMB01000009.1 Protein Homology CDS 119314 119844 . + 0 ID=cds-WP_000378431.1;Parent=gene-CCO56_RS18270;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=CCO56_RS18270;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 119971 121143 . + . ID=gene-CCO56_RS18275;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=CCO56_RS18275;old_locus_tag=CCO56_18270 NZ_NPMB01000009.1 Protein Homology CDS 119971 121143 . + 0 ID=cds-WP_001275603.1;Parent=gene-CCO56_RS18275;Dbxref=GenBank:WP_001275603.1;Name=WP_001275603.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=CCO56_RS18275;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275603.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 121160 122698 . + . ID=gene-CCO56_RS18280;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=CCO56_RS18280;old_locus_tag=CCO56_18275 NZ_NPMB01000009.1 Protein Homology CDS 121160 122698 . + 0 ID=cds-WP_001187298.1;Parent=gene-CCO56_RS18280;Dbxref=GenBank:WP_001187298.1;Name=WP_001187298.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=CCO56_RS18280;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187298.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 122747 124117 . - . ID=gene-CCO56_RS18285;Name=CCO56_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18285;old_locus_tag=CCO56_18280 NZ_NPMB01000009.1 Protein Homology CDS 122747 124117 . - 0 ID=cds-WP_000645133.1;Parent=gene-CCO56_RS18285;Dbxref=GenBank:WP_000645133.1;Name=WP_000645133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=CCO56_RS18285;product=carbohydrate porin;protein_id=WP_000645133.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 124463 124978 . - . ID=gene-CCO56_RS18290;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=CCO56_RS18290;old_locus_tag=CCO56_18285 NZ_NPMB01000009.1 Protein Homology CDS 124463 124978 . - 0 ID=cds-WP_001130194.1;Parent=gene-CCO56_RS18290;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=CCO56_RS18290;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 125128 126684 . - . ID=gene-CCO56_RS18295;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=CCO56_RS18295;old_locus_tag=CCO56_18290 NZ_NPMB01000009.1 Protein Homology CDS 125128 126684 . - 0 ID=cds-WP_000611821.1;Parent=gene-CCO56_RS18295;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=CCO56_RS18295;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 126761 127186 . - . ID=gene-CCO56_RS18300;Name=CCO56_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18300;old_locus_tag=CCO56_18295 NZ_NPMB01000009.1 Protein Homology CDS 126761 127186 . - 0 ID=cds-WP_001279499.1;Parent=gene-CCO56_RS18300;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=CCO56_RS18300;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 127183 127749 . - . ID=gene-CCO56_RS18305;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=CCO56_RS18305;old_locus_tag=CCO56_18300 NZ_NPMB01000009.1 Protein Homology CDS 127183 127749 . - 0 ID=cds-WP_000271296.1;Parent=gene-CCO56_RS18305;Dbxref=GenBank:WP_000271296.1;Name=WP_000271296.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=CCO56_RS18305;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271296.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 127985 128061 . - . ID=gene-CCO56_RS18310;Name=CCO56_RS18310;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS18310;old_locus_tag=CCO56_18305 NZ_NPMB01000009.1 tRNAscan-SE tRNA 127985 128061 . - . ID=rna-CCO56_RS18310;Parent=gene-CCO56_RS18310;anticodon=(pos:complement(128025..128027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS18310;product=tRNA-Arg NZ_NPMB01000009.1 tRNAscan-SE exon 127985 128061 . - . ID=exon-CCO56_RS18310-1;Parent=rna-CCO56_RS18310;anticodon=(pos:complement(128025..128027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS18310;product=tRNA-Arg NZ_NPMB01000009.1 RefSeq gene 128258 128334 . - . ID=gene-CCO56_RS18315;Name=CCO56_RS18315;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS18315;old_locus_tag=CCO56_18310 NZ_NPMB01000009.1 tRNAscan-SE tRNA 128258 128334 . - . ID=rna-CCO56_RS18315;Parent=gene-CCO56_RS18315;anticodon=(pos:complement(128298..128300));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS18315;product=tRNA-Arg NZ_NPMB01000009.1 tRNAscan-SE exon 128258 128334 . - . ID=exon-CCO56_RS18315-1;Parent=rna-CCO56_RS18315;anticodon=(pos:complement(128298..128300));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS18315;product=tRNA-Arg NZ_NPMB01000009.1 RefSeq gene 128397 128473 . - . ID=gene-CCO56_RS18320;Name=CCO56_RS18320;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS18320;old_locus_tag=CCO56_18315 NZ_NPMB01000009.1 tRNAscan-SE tRNA 128397 128473 . - . ID=rna-CCO56_RS18320;Parent=gene-CCO56_RS18320;anticodon=(pos:complement(128437..128439));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS18320;product=tRNA-Arg NZ_NPMB01000009.1 tRNAscan-SE exon 128397 128473 . - . ID=exon-CCO56_RS18320-1;Parent=rna-CCO56_RS18320;anticodon=(pos:complement(128437..128439));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS18320;product=tRNA-Arg NZ_NPMB01000009.1 RefSeq gene 128535 128611 . - . ID=gene-CCO56_RS18325;Name=CCO56_RS18325;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS18325;old_locus_tag=CCO56_18320 NZ_NPMB01000009.1 tRNAscan-SE tRNA 128535 128611 . - . ID=rna-CCO56_RS18325;Parent=gene-CCO56_RS18325;anticodon=(pos:complement(128575..128577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS18325;product=tRNA-Arg NZ_NPMB01000009.1 tRNAscan-SE exon 128535 128611 . - . ID=exon-CCO56_RS18325-1;Parent=rna-CCO56_RS18325;anticodon=(pos:complement(128575..128577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS18325;product=tRNA-Arg NZ_NPMB01000009.1 RefSeq gene 128615 128707 . - . ID=gene-CCO56_RS18330;Name=CCO56_RS18330;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO56_RS18330;old_locus_tag=CCO56_18325 NZ_NPMB01000009.1 tRNAscan-SE tRNA 128615 128707 . - . ID=rna-CCO56_RS18330;Parent=gene-CCO56_RS18330;anticodon=(pos:complement(128671..128673));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS18330;product=tRNA-Ser NZ_NPMB01000009.1 tRNAscan-SE exon 128615 128707 . - . ID=exon-CCO56_RS18330-1;Parent=rna-CCO56_RS18330;anticodon=(pos:complement(128671..128673));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO56_RS18330;product=tRNA-Ser NZ_NPMB01000009.1 RefSeq gene 129011 129196 . - . ID=gene-CCO56_RS18340;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=CCO56_RS18340;old_locus_tag=CCO56_18335 NZ_NPMB01000009.1 Protein Homology CDS 129011 129196 . - 0 ID=cds-WP_000906486.1;Parent=gene-CCO56_RS18340;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=CCO56_RS18340;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 129431 132061 . - . ID=gene-CCO56_RS18345;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CCO56_RS18345;old_locus_tag=CCO56_18340 NZ_NPMB01000009.1 Protein Homology CDS 129431 132061 . - 0 ID=cds-WP_000047228.1;Parent=gene-CCO56_RS18345;Dbxref=GenBank:WP_000047228.1;Name=WP_000047228.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=CCO56_RS18345;product=alanine--tRNA ligase;protein_id=WP_000047228.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 132297 132797 . - . ID=gene-CCO56_RS18355;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CCO56_RS18355;old_locus_tag=CCO56_18350 NZ_NPMB01000009.1 Protein Homology CDS 132297 132797 . - 0 ID=cds-WP_001294863.1;Parent=gene-CCO56_RS18355;Dbxref=GenBank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=CCO56_RS18355;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 132914 133975 . - . ID=gene-CCO56_RS18360;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CCO56_RS18360;old_locus_tag=CCO56_18355 NZ_NPMB01000009.1 Protein Homology CDS 132914 133975 . - 0 ID=cds-WP_000963150.1;Parent=gene-CCO56_RS18360;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=CCO56_RS18360;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 134060 134557 . - . ID=gene-CCO56_RS18365;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=CCO56_RS18365;old_locus_tag=CCO56_18360 NZ_NPMB01000009.1 Protein Homology CDS 134060 134557 . - 0 ID=cds-WP_023136961.1;Parent=gene-CCO56_RS18365;Dbxref=GenBank:WP_023136961.1;Name=WP_023136961.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=CCO56_RS18365;product=nicotinamide-nucleotide amidase;protein_id=WP_023136961.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 134752 134997 . + . ID=gene-CCO56_RS23870;Name=CCO56_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS23870;old_locus_tag=CCO56_18365 NZ_NPMB01000009.1 Protein Homology CDS 134752 134997 . + 0 ID=cds-WP_000053775.1;Parent=gene-CCO56_RS23870;Dbxref=GenBank:WP_000053775.1;Name=WP_000053775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=CCO56_RS23870;product=hypothetical protein;protein_id=WP_000053775.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 135035 136114 . - . ID=gene-CCO56_RS18375;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=CCO56_RS18375;old_locus_tag=CCO56_18370 NZ_NPMB01000009.1 Protein Homology CDS 135035 136114 . - 0 ID=cds-WP_000476811.1;Parent=gene-CCO56_RS18375;Dbxref=GenBank:WP_000476811.1;Name=WP_000476811.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=CCO56_RS18375;product=lytic murein transglycosylase B;protein_id=WP_000476811.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 136367 136930 . + . ID=gene-CCO56_RS18380;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=CCO56_RS18380;old_locus_tag=CCO56_18375 NZ_NPMB01000009.1 Protein Homology CDS 136367 136930 . + 0 ID=cds-WP_000573333.1;Parent=gene-CCO56_RS18380;Dbxref=GenBank:WP_000573333.1;Name=WP_000573333.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=CCO56_RS18380;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573333.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 136927 137898 . + . ID=gene-CCO56_RS18385;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=CCO56_RS18385;old_locus_tag=CCO56_18380 NZ_NPMB01000009.1 Protein Homology CDS 136927 137898 . + 0 ID=cds-WP_000199039.1;Parent=gene-CCO56_RS18385;Dbxref=GenBank:WP_000199039.1;Name=WP_000199039.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=CCO56_RS18385;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199039.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 137910 138272 . + . ID=gene-CCO56_RS18390;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=CCO56_RS18390;old_locus_tag=CCO56_18385 NZ_NPMB01000009.1 Protein Homology CDS 137910 138272 . + 0 ID=cds-WP_001645799.1;Parent=gene-CCO56_RS18390;Dbxref=GenBank:WP_001645799.1;Name=WP_001645799.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=CCO56_RS18390;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_001645799.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 138284 139063 . + . ID=gene-CCO56_RS18395;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=CCO56_RS18395;old_locus_tag=CCO56_18390 NZ_NPMB01000009.1 Protein Homology CDS 138284 139063 . + 0 ID=cds-WP_001077372.1;Parent=gene-CCO56_RS18395;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=CCO56_RS18395;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 139140 139499 . + . ID=gene-CCO56_RS18400;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=CCO56_RS18400;old_locus_tag=CCO56_18395 NZ_NPMB01000009.1 Protein Homology CDS 139140 139499 . + 0 ID=cds-WP_000255198.1;Parent=gene-CCO56_RS18400;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=CCO56_RS18400;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 139697 140470 . + . ID=gene-CCO56_RS18405;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=CCO56_RS18405;old_locus_tag=CCO56_18400 NZ_NPMB01000009.1 Protein Homology CDS 139697 140470 . + 0 ID=cds-WP_000804536.1;Parent=gene-CCO56_RS18405;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=CCO56_RS18405;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 140463 141428 . + . ID=gene-CCO56_RS18410;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=CCO56_RS18410;old_locus_tag=CCO56_18405 NZ_NPMB01000009.1 Protein Homology CDS 140463 141428 . + 0 ID=cds-WP_023208357.1;Parent=gene-CCO56_RS18410;Dbxref=GenBank:WP_023208357.1;Name=WP_023208357.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=CCO56_RS18410;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_023208357.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 141425 142945 . - . ID=gene-CCO56_RS18415;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=CCO56_RS18415;old_locus_tag=CCO56_18410 NZ_NPMB01000009.1 Protein Homology CDS 141425 142945 . - 0 ID=cds-WP_000010804.1;Parent=gene-CCO56_RS18415;Dbxref=GenBank:WP_000010804.1;Name=WP_000010804.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=CCO56_RS18415;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010804.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 143131 144570 . + . ID=gene-CCO56_RS18420;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=CCO56_RS18420;old_locus_tag=CCO56_18415 NZ_NPMB01000009.1 Protein Homology CDS 143131 144570 . + 0 ID=cds-WP_001527986.1;Parent=gene-CCO56_RS18420;Dbxref=GenBank:WP_001527986.1;Name=WP_001527986.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=CCO56_RS18420;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_001527986.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 144567 145700 . + . ID=gene-CCO56_RS18425;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=CCO56_RS18425;old_locus_tag=CCO56_18420 NZ_NPMB01000009.1 Protein Homology CDS 144567 145700 . + 0 ID=cds-WP_080177030.1;Parent=gene-CCO56_RS18425;Dbxref=GenBank:WP_080177030.1;Name=WP_080177030.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=CCO56_RS18425;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_080177030.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 145797 148037 . - . ID=gene-CCO56_RS18430;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=CCO56_RS18430;old_locus_tag=CCO56_18425 NZ_NPMB01000009.1 Protein Homology CDS 145797 148037 . - 0 ID=cds-WP_039512736.1;Parent=gene-CCO56_RS18430;Dbxref=GenBank:WP_039512736.1;Name=WP_039512736.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=CCO56_RS18430;product=carbamoyltransferase HypF;protein_id=WP_039512736.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 148183 148728 . - . ID=gene-CCO56_RS18435;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=CCO56_RS18435;old_locus_tag=CCO56_18430 NZ_NPMB01000009.1 Protein Homology CDS 148183 148728 . - 0 ID=cds-WP_001078791.1;Parent=gene-CCO56_RS18435;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=CCO56_RS18435;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 148929 149738 . - . ID=gene-CCO56_RS18440;Name=CCO56_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18440;old_locus_tag=CCO56_18435 NZ_NPMB01000009.1 Protein Homology CDS 148929 149738 . - 0 ID=cds-WP_023233236.1;Parent=gene-CCO56_RS18440;Dbxref=GenBank:WP_023233236.1;Name=WP_023233236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=CCO56_RS18440;product=hypothetical protein;protein_id=WP_023233236.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 149765 150235 . - . ID=gene-CCO56_RS18445;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=CCO56_RS18445;old_locus_tag=CCO56_18440 NZ_NPMB01000009.1 Protein Homology CDS 149765 150235 . - 0 ID=cds-WP_001645808.1;Parent=gene-CCO56_RS18445;Dbxref=GenBank:WP_001645808.1;Name=WP_001645808.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907211.1;locus_tag=CCO56_RS18445;product=hydrogenase maturation peptidase HycI;protein_id=WP_001645808.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 150228 150638 . - . ID=gene-CCO56_RS18450;Name=CCO56_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18450;old_locus_tag=CCO56_18445 NZ_NPMB01000009.1 Protein Homology CDS 150228 150638 . - 0 ID=cds-WP_001527961.1;Parent=gene-CCO56_RS18450;Dbxref=GenBank:WP_001527961.1;Name=WP_001527961.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=CCO56_RS18450;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_001527961.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 150635 151402 . - . ID=gene-CCO56_RS18455;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=CCO56_RS18455;old_locus_tag=CCO56_18450 NZ_NPMB01000009.1 Protein Homology CDS 150635 151402 . - 0 ID=cds-WP_000067419.1;Parent=gene-CCO56_RS18455;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=CCO56_RS18455;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 151402 151944 . - . ID=gene-CCO56_RS18460;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=CCO56_RS18460;old_locus_tag=CCO56_18455 NZ_NPMB01000009.1 Protein Homology CDS 151402 151944 . - 0 ID=cds-WP_000493767.1;Parent=gene-CCO56_RS18460;Dbxref=GenBank:WP_000493767.1;Name=WP_000493767.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=CCO56_RS18460;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493767.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 151954 153663 . - . ID=gene-CCO56_RS18465;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=CCO56_RS18465;old_locus_tag=CCO56_18460 NZ_NPMB01000009.1 Protein Homology CDS 151954 153663 . - 0 ID=cds-WP_001288155.1;Parent=gene-CCO56_RS18465;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=CCO56_RS18465;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 153681 154604 . - . ID=gene-CCO56_RS18470;Name=CCO56_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18470;old_locus_tag=CCO56_18465 NZ_NPMB01000009.1 Protein Homology CDS 153681 154604 . - 0 ID=cds-WP_000110563.1;Parent=gene-CCO56_RS18470;Dbxref=GenBank:WP_000110563.1;Name=WP_000110563.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=CCO56_RS18470;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110563.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 154607 156433 . - . ID=gene-CCO56_RS18475;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=CCO56_RS18475;old_locus_tag=CCO56_18470 NZ_NPMB01000009.1 Protein Homology CDS 154607 156433 . - 0 ID=cds-WP_000097041.1;Parent=gene-CCO56_RS18475;Dbxref=GenBank:WP_000097041.1;Name=WP_000097041.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=CCO56_RS18475;product=formate hydrogenlyase subunit 3;protein_id=WP_000097041.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 156433 157041 . - . ID=gene-CCO56_RS18480;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=CCO56_RS18480;old_locus_tag=CCO56_18475 NZ_NPMB01000009.1 Protein Homology CDS 156433 157041 . - 0 ID=cds-WP_001079163.1;Parent=gene-CCO56_RS18480;Dbxref=GenBank:WP_001079163.1;Name=WP_001079163.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=CCO56_RS18480;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079163.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 157187 157648 . - . ID=gene-CCO56_RS18485;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=CCO56_RS18485;old_locus_tag=CCO56_18480 NZ_NPMB01000009.1 Protein Homology CDS 157187 157648 . - 0 ID=cds-WP_000158075.1;Parent=gene-CCO56_RS18485;Dbxref=GenBank:WP_000158075.1;Name=WP_000158075.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=CCO56_RS18485;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158075.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 157858 158214 . + . ID=gene-CCO56_RS18495;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO56_RS18495;old_locus_tag=CCO56_18490 NZ_NPMB01000009.1 Protein Homology CDS 157858 158214 . + 0 ID=cds-WP_000544461.1;Parent=gene-CCO56_RS18495;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=CCO56_RS18495;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 158283 159155 . + . ID=gene-CCO56_RS18500;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=CCO56_RS18500;old_locus_tag=CCO56_18495 NZ_NPMB01000009.1 Protein Homology CDS 158283 159155 . + 0 ID=cds-WP_000337638.1;Parent=gene-CCO56_RS18500;Dbxref=GenBank:WP_000337638.1;Name=WP_000337638.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=CCO56_RS18500;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337638.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 159146 159418 . + . ID=gene-CCO56_RS18505;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO56_RS18505;old_locus_tag=CCO56_18500 NZ_NPMB01000009.1 Protein Homology CDS 159146 159418 . + 0 ID=cds-WP_000334871.1;Parent=gene-CCO56_RS18505;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=CCO56_RS18505;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 159418 160539 . + . ID=gene-CCO56_RS18510;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=CCO56_RS18510;old_locus_tag=CCO56_18505 NZ_NPMB01000009.1 Protein Homology CDS 159418 160539 . + 0 ID=cds-WP_080177029.1;Parent=gene-CCO56_RS18510;Dbxref=GenBank:WP_080177029.1;Name=WP_080177029.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=CCO56_RS18510;product=hydrogenase formation protein HypD;protein_id=WP_080177029.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 160536 161546 . + . ID=gene-CCO56_RS18515;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=CCO56_RS18515;old_locus_tag=CCO56_18510 NZ_NPMB01000009.1 Protein Homology CDS 160536 161546 . + 0 ID=cds-WP_001059957.1;Parent=gene-CCO56_RS18515;Dbxref=GenBank:WP_001059957.1;Name=WP_001059957.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=CCO56_RS18515;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059957.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 161765 163843 . + . ID=gene-CCO56_RS18520;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO56_RS18520;old_locus_tag=CCO56_18515 NZ_NPMB01000009.1 Protein Homology CDS 161765 163843 . + 0 ID=cds-WP_000122692.1;Parent=gene-CCO56_RS18520;Dbxref=GenBank:WP_000122692.1;Name=WP_000122692.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=CCO56_RS18520;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122692.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 163905 164249 . - . ID=gene-CCO56_RS18525;Name=CCO56_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18525;old_locus_tag=CCO56_18520 NZ_NPMB01000009.1 Protein Homology CDS 163905 164249 . - 0 ID=cds-WP_001117938.1;Parent=gene-CCO56_RS18525;Dbxref=GenBank:WP_001117938.1;Name=WP_001117938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=CCO56_RS18525;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117938.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 164431 165348 . + . ID=gene-CCO56_RS18530;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=CCO56_RS18530;old_locus_tag=CCO56_18525 NZ_NPMB01000009.1 Protein Homology CDS 164431 165348 . + 0 ID=cds-WP_000182930.1;Parent=gene-CCO56_RS18530;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=CCO56_RS18530;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 165345 166166 . + . ID=gene-CCO56_RS18535;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=CCO56_RS18535;old_locus_tag=CCO56_18530 NZ_NPMB01000009.1 Protein Homology CDS 165345 166166 . + 0 ID=cds-WP_000083153.1;Parent=gene-CCO56_RS18535;Dbxref=GenBank:WP_000083153.1;Name=WP_000083153.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=CCO56_RS18535;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000083153.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 166163 167023 . + . ID=gene-CCO56_RS18540;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=CCO56_RS18540;old_locus_tag=CCO56_18535 NZ_NPMB01000009.1 Protein Homology CDS 166163 167023 . + 0 ID=cds-WP_001104336.1;Parent=gene-CCO56_RS18540;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=CCO56_RS18540;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 167014 167862 . + . ID=gene-CCO56_RS18545;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=CCO56_RS18545;old_locus_tag=CCO56_18540 NZ_NPMB01000009.1 Protein Homology CDS 167014 167862 . + 0 ID=cds-WP_000480209.1;Parent=gene-CCO56_RS18545;Dbxref=GenBank:WP_000480209.1;Name=WP_000480209.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=CCO56_RS18545;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480209.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 167961 168869 . - . ID=gene-CCO56_RS18550;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=CCO56_RS18550;old_locus_tag=CCO56_18545 NZ_NPMB01000009.1 Protein Homology CDS 167961 168869 . - 0 ID=cds-WP_080177028.1;Parent=gene-CCO56_RS18550;Dbxref=GenBank:WP_080177028.1;Name=WP_080177028.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=CCO56_RS18550;product=type III secretion system YopJ family effector AvrA;protein_id=WP_080177028.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 169030 169785 . - . ID=gene-CCO56_RS18555;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=CCO56_RS18555;old_locus_tag=CCO56_18550 NZ_NPMB01000009.1 Protein Homology CDS 169030 169785 . - 0 ID=cds-WP_001246662.1;Parent=gene-CCO56_RS18555;Dbxref=GenBank:WP_001246662.1;Name=WP_001246662.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=CCO56_RS18555;product=transcriptional regulator SprB;protein_id=WP_001246662.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 170170 171057 . - . ID=gene-CCO56_RS18565;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=CCO56_RS18565;old_locus_tag=CCO56_18560 NZ_NPMB01000009.1 Protein Homology CDS 170170 171057 . - 0 ID=cds-WP_000243998.1;Parent=gene-CCO56_RS18565;Dbxref=GenBank:WP_000243998.1;Name=WP_000243998.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=CCO56_RS18565;product=invasion transcriptional regulator HilC;protein_id=WP_000243998.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 171403 171855 . - . ID=gene-CCO56_RS18570;Name=CCO56_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18570;old_locus_tag=CCO56_18565 NZ_NPMB01000009.1 Protein Homology CDS 171403 171855 . - 0 ID=cds-WP_000612177.1;Parent=gene-CCO56_RS18570;Dbxref=GenBank:WP_000612177.1;Name=WP_000612177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=CCO56_RS18570;product=type III secretion system effector protein OrgC;protein_id=WP_000612177.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 171852 172532 . - . ID=gene-CCO56_RS18575;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=CCO56_RS18575;old_locus_tag=CCO56_18570 NZ_NPMB01000009.1 Protein Homology CDS 171852 172532 . - 0 ID=cds-WP_000916654.1;Parent=gene-CCO56_RS18575;Dbxref=GenBank:WP_000916654.1;Name=WP_000916654.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=CCO56_RS18575;product=type III secretion system linker protein OrgB;protein_id=WP_000916654.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 172489 173088 . - . ID=gene-CCO56_RS18580;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=CCO56_RS18580;old_locus_tag=CCO56_18575 NZ_NPMB01000009.1 Protein Homology CDS 172489 173088 . - 0 ID=cds-WP_001574876.1;Parent=gene-CCO56_RS18580;Dbxref=GenBank:WP_001574876.1;Name=WP_001574876.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=CCO56_RS18580;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001574876.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 173060 173818 . - . ID=gene-CCO56_RS18585;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=CCO56_RS18585;old_locus_tag=CCO56_18580 NZ_NPMB01000009.1 Protein Homology CDS 173060 173818 . - 0 ID=cds-WP_023262728.1;Parent=gene-CCO56_RS18585;Dbxref=GenBank:WP_023262728.1;Name=WP_023262728.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=CCO56_RS18585;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_023262728.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 173815 174120 . - . ID=gene-CCO56_RS18590;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=CCO56_RS18590;old_locus_tag=CCO56_18585 NZ_NPMB01000009.1 Protein Homology CDS 173815 174120 . - 0 ID=cds-WP_000020431.1;Parent=gene-CCO56_RS18590;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=CCO56_RS18590;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 174139 174381 . - . ID=gene-CCO56_RS18595;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=CCO56_RS18595;old_locus_tag=CCO56_18590 NZ_NPMB01000009.1 Protein Homology CDS 174139 174381 . - 0 ID=cds-WP_000235228.1;Parent=gene-CCO56_RS18595;Dbxref=GenBank:WP_000235228.1;Name=WP_000235228.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=CCO56_RS18595;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235228.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 174406 175584 . - . ID=gene-CCO56_RS18600;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=CCO56_RS18600;old_locus_tag=CCO56_18595 NZ_NPMB01000009.1 Protein Homology CDS 174406 175584 . - 0 ID=cds-WP_000450196.1;Parent=gene-CCO56_RS18600;Dbxref=GenBank:WP_000450196.1;Name=WP_000450196.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=CCO56_RS18600;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450196.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 175900 176829 . + . ID=gene-CCO56_RS18605;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=CCO56_RS18605;old_locus_tag=CCO56_18600 NZ_NPMB01000009.1 Protein Homology CDS 175900 176829 . + 0 ID=cds-WP_001527962.1;Parent=gene-CCO56_RS18605;Dbxref=GenBank:WP_001527962.1;Name=WP_001527962.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=CCO56_RS18605;product=transcriptional regulator HilD;protein_id=WP_001527962.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 177919 179580 . + . ID=gene-CCO56_RS18610;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=CCO56_RS18610;old_locus_tag=CCO56_18605 NZ_NPMB01000009.1 Protein Homology CDS 177919 179580 . + 0 ID=cds-WP_001120090.1;Parent=gene-CCO56_RS18610;Dbxref=GenBank:WP_001120090.1;Name=WP_001120090.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=CCO56_RS18610;product=transcriptional regulator HilA;protein_id=WP_001120090.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 179598 180080 . + . ID=gene-CCO56_RS18615;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=CCO56_RS18615;old_locus_tag=CCO56_18610 NZ_NPMB01000009.1 Protein Homology CDS 179598 180080 . + 0 ID=cds-WP_058344397.1;Parent=gene-CCO56_RS18615;Dbxref=GenBank:WP_058344397.1;Name=WP_058344397.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=CCO56_RS18615;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_058344397.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 180134 181765 . - . ID=gene-CCO56_RS18620;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=CCO56_RS18620;old_locus_tag=CCO56_18615 NZ_NPMB01000009.1 Protein Homology CDS 180134 181765 . - 0 ID=cds-WP_058344398.1;Parent=gene-CCO56_RS18620;Dbxref=GenBank:WP_058344398.1;Name=WP_058344398.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=CCO56_RS18620;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_058344398.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 181752 182144 . - . ID=gene-CCO56_RS18625;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=CCO56_RS18625;old_locus_tag=CCO56_18620 NZ_NPMB01000009.1 Protein Homology CDS 181752 182144 . - 0 ID=cds-WP_001147854.1;Parent=gene-CCO56_RS18625;Dbxref=GenBank:WP_001147854.1;Name=WP_001147854.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=CCO56_RS18625;product=chaperone SicP;protein_id=WP_001147854.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 182171 182431 . - . ID=gene-CCO56_RS18630;Name=CCO56_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18630;old_locus_tag=CCO56_18625 NZ_NPMB01000009.1 Protein Homology CDS 182171 182431 . - 0 ID=cds-WP_000692251.1;Parent=gene-CCO56_RS18630;Dbxref=GenBank:WP_000692251.1;Name=WP_000692251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=CCO56_RS18630;product=hypothetical protein;protein_id=WP_000692251.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 182475 182723 . - . ID=gene-CCO56_RS18635;Name=CCO56_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18635;old_locus_tag=CCO56_18630 NZ_NPMB01000009.1 Protein Homology CDS 182475 182723 . - 0 ID=cds-WP_001055579.1;Parent=gene-CCO56_RS18635;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=CCO56_RS18635;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 182742 184799 . - . ID=gene-CCO56_RS18640;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=CCO56_RS18640;old_locus_tag=CCO56_18635 NZ_NPMB01000009.1 Protein Homology CDS 182742 184799 . - 0 ID=cds-WP_058344399.1;Parent=gene-CCO56_RS18640;Dbxref=GenBank:WP_058344399.1;Name=WP_058344399.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=CCO56_RS18640;product=SPI-1 type III secretion system effector SipA;protein_id=WP_058344399.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 184818 185840 . - . ID=gene-CCO56_RS18645;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=CCO56_RS18645;old_locus_tag=CCO56_18640 NZ_NPMB01000009.1 Protein Homology CDS 184818 185840 . - 0 ID=cds-WP_000932250.1;Parent=gene-CCO56_RS18645;Dbxref=GenBank:WP_000932250.1;Name=WP_000932250.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=CCO56_RS18645;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_000932250.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 185911 187140 . - . ID=gene-CCO56_RS18650;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=CCO56_RS18650;old_locus_tag=CCO56_18645 NZ_NPMB01000009.1 Protein Homology CDS 185911 187140 . - 0 ID=cds-WP_000909029.1;Parent=gene-CCO56_RS18650;Dbxref=GenBank:WP_000909029.1;Name=WP_000909029.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=CCO56_RS18650;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909029.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 187168 188949 . - . ID=gene-CCO56_RS18655;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=CCO56_RS18655;old_locus_tag=CCO56_18650 NZ_NPMB01000009.1 Protein Homology CDS 187168 188949 . - 0 ID=cds-WP_000245782.1;Parent=gene-CCO56_RS18655;Dbxref=GenBank:WP_000245782.1;Name=WP_000245782.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=CCO56_RS18655;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245782.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 188952 189449 . - . ID=gene-CCO56_RS18660;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=CCO56_RS18660;old_locus_tag=CCO56_18655 NZ_NPMB01000009.1 Protein Homology CDS 188952 189449 . - 0 ID=cds-WP_000386309.1;Parent=gene-CCO56_RS18660;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=CCO56_RS18660;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 189587 190657 . - . ID=gene-CCO56_RS18665;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=CCO56_RS18665;old_locus_tag=CCO56_18660 NZ_NPMB01000009.1 Protein Homology CDS 189587 190657 . - 0 ID=cds-WP_000097719.1;Parent=gene-CCO56_RS18665;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=CCO56_RS18665;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 190644 191435 . - . ID=gene-CCO56_RS18670;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=CCO56_RS18670;old_locus_tag=CCO56_18665 NZ_NPMB01000009.1 Protein Homology CDS 190644 191435 . - 0 ID=cds-WP_000498965.1;Parent=gene-CCO56_RS18670;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=CCO56_RS18670;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 191439 191699 . - . ID=gene-CCO56_RS18675;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=CCO56_RS18675;old_locus_tag=CCO56_18670 NZ_NPMB01000009.1 Protein Homology CDS 191439 191699 . - 0 ID=cds-WP_000342503.1;Parent=gene-CCO56_RS18675;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=CCO56_RS18675;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 191725 192399 . - . ID=gene-CCO56_RS18680;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=CCO56_RS18680;old_locus_tag=CCO56_18675 NZ_NPMB01000009.1 Protein Homology CDS 191725 192399 . - 0 ID=cds-WP_000526016.1;Parent=gene-CCO56_RS18680;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=CCO56_RS18680;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 192389 193300 . - . ID=gene-CCO56_RS18685;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=CCO56_RS18685;old_locus_tag=CCO56_18680 NZ_NPMB01000009.1 Protein Homology CDS 192389 193300 . - 0 ID=cds-WP_000058731.1;Parent=gene-CCO56_RS18685;Dbxref=GenBank:WP_000058731.1;Name=WP_000058731.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=CCO56_RS18685;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058731.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 193300 194310 . - . ID=gene-CCO56_RS18690;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=CCO56_RS18690;old_locus_tag=CCO56_18685 NZ_NPMB01000009.1 Protein Homology CDS 193300 194310 . - 0 ID=cds-WP_001645913.1;Parent=gene-CCO56_RS18690;Dbxref=GenBank:WP_001645913.1;Name=WP_001645913.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=CCO56_RS18690;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_001645913.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 194310 194753 . - . ID=gene-CCO56_RS18695;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=CCO56_RS18695;old_locus_tag=CCO56_18690 NZ_NPMB01000009.1 Protein Homology CDS 194310 194753 . - 0 ID=cds-WP_000555884.1;Parent=gene-CCO56_RS18695;Dbxref=GenBank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=CCO56_RS18695;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 194731 196026 . - . ID=gene-CCO56_RS18700;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=CCO56_RS18700;old_locus_tag=CCO56_18695 NZ_NPMB01000009.1 Protein Homology CDS 194731 196026 . - 0 ID=cds-WP_000856766.1;Parent=gene-CCO56_RS18700;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=CCO56_RS18700;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 196023 196430 . - . ID=gene-CCO56_RS18705;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=CCO56_RS18705;old_locus_tag=CCO56_18700 NZ_NPMB01000009.1 Protein Homology CDS 196023 196430 . - 0 ID=cds-WP_001164066.1;Parent=gene-CCO56_RS18705;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=CCO56_RS18705;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 196454 198511 . - . ID=gene-CCO56_RS18710;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=CCO56_RS18710;old_locus_tag=CCO56_18705 NZ_NPMB01000009.1 Protein Homology CDS 196454 198511 . - 0 ID=cds-WP_000927219.1;Parent=gene-CCO56_RS18710;Dbxref=GenBank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=CCO56_RS18710;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 198536 199654 . - . ID=gene-CCO56_RS18715;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=CCO56_RS18715;old_locus_tag=CCO56_18710 NZ_NPMB01000009.1 Protein Homology CDS 198536 199654 . - 0 ID=cds-WP_000612171.1;Parent=gene-CCO56_RS18715;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=CCO56_RS18715;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 199651 201339 . - . ID=gene-CCO56_RS18720;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=CCO56_RS18720;old_locus_tag=CCO56_18715 NZ_NPMB01000009.1 Protein Homology CDS 199651 201339 . - 0 ID=cds-WP_000848099.1;Parent=gene-CCO56_RS18720;Dbxref=GenBank:WP_000848099.1;Name=WP_000848099.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=CCO56_RS18720;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848099.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 201336 201986 . - . ID=gene-CCO56_RS18725;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=CCO56_RS18725;old_locus_tag=CCO56_18720 NZ_NPMB01000009.1 Protein Homology CDS 201336 201986 . - 0 ID=cds-WP_001747511.1;Parent=gene-CCO56_RS18725;Dbxref=GenBank:WP_001747511.1;Name=WP_001747511.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=CCO56_RS18725;product=type III secretion system transcriptional activator InvF;protein_id=WP_001747511.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 202443 202886 . + . ID=gene-CCO56_RS18730;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=CCO56_RS18730;old_locus_tag=CCO56_18725 NZ_NPMB01000009.1 Protein Homology CDS 202443 202886 . + 0 ID=cds-WP_023136972.1;Parent=gene-CCO56_RS18730;Dbxref=GenBank:WP_023136972.1;Name=WP_023136972.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=CCO56_RS18730;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_023136972.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 203317 203766 . + . ID=gene-CCO56_RS18735;Name=CCO56_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18735;old_locus_tag=CCO56_18730 NZ_NPMB01000009.1 Protein Homology CDS 203317 203766 . + 0 ID=cds-WP_023262724.1;Parent=gene-CCO56_RS18735;Dbxref=GenBank:WP_023262724.1;Name=WP_023262724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=CCO56_RS18735;product=STM2901 family protein;protein_id=WP_023262724.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 203751 204098 . + . ID=gene-CCO56_RS18740;Name=CCO56_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18740;old_locus_tag=CCO56_18735 NZ_NPMB01000009.1 Protein Homology CDS 203751 204098 . + 0 ID=cds-WP_001543246.1;Parent=gene-CCO56_RS18740;Dbxref=GenBank:WP_001543246.1;Name=WP_001543246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=CCO56_RS18740;product=DUF1493 family protein;protein_id=WP_001543246.1;transl_table=11 NZ_NPMB01000009.1 RefSeq pseudogene 204148 204240 . + . ID=gene-CCO56_RS18745;Name=CCO56_RS18745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS18745;partial=true;pseudo=true;start_range=.,204148 NZ_NPMB01000009.1 Protein Homology CDS 204148 204240 . + 0 ID=cds-CCO56_RS18745;Parent=gene-CCO56_RS18745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=CCO56_RS18745;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,204148;transl_table=11 NZ_NPMB01000009.1 RefSeq pseudogene 204313 204530 . - . ID=gene-CCO56_RS18750;Name=CCO56_RS18750;end_range=204530,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO56_RS18750;old_locus_tag=CCO56_18740;partial=true;pseudo=true NZ_NPMB01000009.1 Protein Homology CDS 204313 204530 . - 0 ID=cds-CCO56_RS18750;Parent=gene-CCO56_RS18750;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=204530,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=CCO56_RS18750;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 204865 205521 . + . ID=gene-CCO56_RS18755;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=CCO56_RS18755;old_locus_tag=CCO56_18745 NZ_NPMB01000009.1 Protein Homology CDS 204865 205521 . + 0 ID=cds-WP_080177027.1;Parent=gene-CCO56_RS18755;Dbxref=GenBank:WP_080177027.1;Name=WP_080177027.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=CCO56_RS18755;product=protein-serine/threonine phosphatase;protein_id=WP_080177027.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 205693 206214 . - . ID=gene-CCO56_RS18760;Name=CCO56_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18760;old_locus_tag=CCO56_18750 NZ_NPMB01000009.1 Protein Homology CDS 205693 206214 . - 0 ID=cds-WP_024150559.1;Parent=gene-CCO56_RS18760;Dbxref=GenBank:WP_024150559.1;Name=WP_024150559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=CCO56_RS18760;product=hypothetical protein;protein_id=WP_024150559.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 206373 208940 . + . ID=gene-CCO56_RS18765;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CCO56_RS18765;old_locus_tag=CCO56_18755 NZ_NPMB01000009.1 Protein Homology CDS 206373 208940 . + 0 ID=cds-WP_001005807.1;Parent=gene-CCO56_RS18765;Dbxref=GenBank:WP_001005807.1;Name=WP_001005807.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=CCO56_RS18765;product=DNA mismatch repair protein MutS;protein_id=WP_001005807.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 208996 209376 . - . ID=gene-CCO56_RS18770;Name=CCO56_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18770;old_locus_tag=CCO56_18760 NZ_NPMB01000009.1 Protein Homology CDS 208996 209376 . - 0 ID=cds-WP_001070459.1;Parent=gene-CCO56_RS18770;Dbxref=GenBank:WP_001070459.1;Name=WP_001070459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=CCO56_RS18770;product=DUF4440 domain-containing protein;protein_id=WP_001070459.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 209373 210581 . - . ID=gene-CCO56_RS18775;Name=CCO56_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18775;old_locus_tag=CCO56_18765 NZ_NPMB01000009.1 Protein Homology CDS 209373 210581 . - 0 ID=cds-WP_061377575.1;Parent=gene-CCO56_RS18775;Dbxref=GenBank:WP_061377575.1;Name=WP_061377575.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=CCO56_RS18775;product=MFS transporter;protein_id=WP_061377575.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 210669 211601 . + . ID=gene-CCO56_RS18780;Name=CCO56_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18780;old_locus_tag=CCO56_18770 NZ_NPMB01000009.1 Protein Homology CDS 210669 211601 . + 0 ID=cds-WP_072275020.1;Parent=gene-CCO56_RS18780;Dbxref=GenBank:WP_072275020.1;Name=WP_072275020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=CCO56_RS18780;product=LysR family transcriptional regulator;protein_id=WP_072275020.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 211643 213139 . - . ID=gene-CCO56_RS18785;Name=CCO56_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18785;old_locus_tag=CCO56_18775 NZ_NPMB01000009.1 Protein Homology CDS 211643 213139 . - 0 ID=cds-WP_000202719.1;Parent=gene-CCO56_RS18785;Dbxref=GenBank:WP_000202719.1;Name=WP_000202719.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=CCO56_RS18785;product=GntP family permease;protein_id=WP_000202719.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 213136 214086 . - . ID=gene-CCO56_RS18790;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=CCO56_RS18790;old_locus_tag=CCO56_18780 NZ_NPMB01000009.1 Protein Homology CDS 213136 214086 . - 0 ID=cds-WP_001165727.1;Parent=gene-CCO56_RS18790;Dbxref=GenBank:WP_001165727.1;Name=WP_001165727.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=CCO56_RS18790;product=D-erythronate dehydrogenase;protein_id=WP_001165727.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 214126 214902 . - . ID=gene-CCO56_RS18795;Name=CCO56_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18795;old_locus_tag=CCO56_18785 NZ_NPMB01000009.1 Protein Homology CDS 214126 214902 . - 0 ID=cds-WP_061377577.1;Parent=gene-CCO56_RS18795;Dbxref=GenBank:WP_061377577.1;Name=WP_061377577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=CCO56_RS18795;product=HPr family phosphocarrier protein;protein_id=WP_061377577.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 214907 215545 . - . ID=gene-CCO56_RS18800;Name=CCO56_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18800;old_locus_tag=CCO56_18790 NZ_NPMB01000009.1 Protein Homology CDS 214907 215545 . - 0 ID=cds-WP_000209068.1;Parent=gene-CCO56_RS18800;Dbxref=GenBank:WP_000209068.1;Name=WP_000209068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=CCO56_RS18800;product=aldolase;protein_id=WP_000209068.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 215542 216804 . - . ID=gene-CCO56_RS18805;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=CCO56_RS18805;old_locus_tag=CCO56_18795 NZ_NPMB01000009.1 Protein Homology CDS 215542 216804 . - 0 ID=cds-WP_080177026.1;Parent=gene-CCO56_RS18805;Dbxref=GenBank:WP_080177026.1;Name=WP_080177026.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=CCO56_RS18805;product=3-oxo-tetronate kinase;protein_id=WP_080177026.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 216798 217721 . - . ID=gene-CCO56_RS18810;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=CCO56_RS18810;old_locus_tag=CCO56_18800 NZ_NPMB01000009.1 Protein Homology CDS 216798 217721 . - 0 ID=cds-WP_000206958.1;Parent=gene-CCO56_RS18810;Dbxref=GenBank:WP_000206958.1;Name=WP_000206958.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=CCO56_RS18810;product=L-threonate dehydrogenase;protein_id=WP_000206958.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 217918 218682 . + . ID=gene-CCO56_RS18815;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=CCO56_RS18815;old_locus_tag=CCO56_18805 NZ_NPMB01000009.1 Protein Homology CDS 217918 218682 . + 0 ID=cds-WP_000613179.1;Parent=gene-CCO56_RS18815;Dbxref=GenBank:WP_000613179.1;Name=WP_000613179.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=CCO56_RS18815;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613179.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 218701 219105 . - . ID=gene-CCO56_RS18820;Name=CCO56_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18820;old_locus_tag=CCO56_18810 NZ_NPMB01000009.1 Protein Homology CDS 218701 219105 . - 0 ID=cds-WP_000423338.1;Parent=gene-CCO56_RS18820;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=CCO56_RS18820;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 219276 219869 . + . ID=gene-CCO56_RS18825;Name=CCO56_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18825;old_locus_tag=CCO56_18815 NZ_NPMB01000009.1 Protein Homology CDS 219276 219869 . + 0 ID=cds-WP_058344402.1;Parent=gene-CCO56_RS18825;Dbxref=GenBank:WP_058344402.1;Name=WP_058344402.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=CCO56_RS18825;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_058344402.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 219869 221296 . + . ID=gene-CCO56_RS18830;Name=CCO56_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18830;old_locus_tag=CCO56_18820 NZ_NPMB01000009.1 Protein Homology CDS 219869 221296 . + 0 ID=cds-WP_000863168.1;Parent=gene-CCO56_RS18830;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=CCO56_RS18830;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11 NZ_NPMB01000009.1 RefSeq gene 221307 221543 . + . ID=gene-CCO56_RS18835;Name=CCO56_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO56_RS18835;old_locus_tag=CCO56_18825 NZ_NPMB01000009.1 Protein Homology CDS 221307 221543 . + 0 ID=cds-WP_000562967.1;Parent=gene-CCO56_RS18835;Dbxref=GenBank:WP_000562967.1;Name=WP_000562967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=CCO56_RS18835;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562967.1;transl_table=11 NZ_NPMB01000009.1 RefSeq pseudogene 221588 222499 . - . ID=gene-CCO56_RS18840;Name=rpoS;end_range=222499,.;gbkey=Gene;gene=rpoS;gene_biotype=pseudogene;locus_tag=CCO56_RS18840;old_locus_tag=CCO56_18830;partial=true;pseudo=true NZ_NPMB01000009.1 Protein Homology CDS 221588 222499 . - 0 ID=cds-CCO56_RS18840;Parent=gene-CCO56_RS18840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;end_range=222499,.;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=CCO56_RS18840;partial=true;product=RNA polymerase sigma factor RpoS;pseudo=true;transl_table=11 ###